LOCUS       DANLXO010000001        58263 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.001, whole genome shotgun sequence.
ACCESSION   DANLXO010000001 DANLXO010000000
VERSION     DANLXO010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 58263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 58263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..58263
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.001"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(6..1319)
                     /gene="glgC"
                     /locus_tag="PXD69_000001"
     CDS             complement(6..1319)
                     /gene="glgC"
                     /locus_tag="PXD69_000001"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HDL6282256.1"
                     /translation="MLNQESTALVARQDLTNDTLVLILAGGRGSRLYELTDKRAKPAV
                     YFGGSRRIIDFALSNCINSNLLKIGVITQYAAHSLLRHLQRGWSFLPYERNQYIDMLP
                     ARQQLDENTWYRGTADAVYQNMAMMKSHYRPKYVVILAGDHIYKMDYTQMLKDHVDQG
                     AKCTVGCIEVPRSQATEFGVMAVNEKLKVKEFVEKPADPPAMPGKPDSSLASMGIYVF
                     NADYLYEMLEKEASTPGTSHDFGKDIIPKAVEQGVLYAHPFERSCKGRNASGAIYWRD
                     VGTIDSYWAAHMDLVSEDPELDLYDESWPIHGRPQQTAPARFFYNRARARTLDNSLIA
                     GGCVITDAEISNSVLFNRVHVEAESVIEHTVILPQVTIGKNCVIKRAVIDRHCVIPDG
                     LEIGVNAEEDAKRFRVSKNGIVLVTQSMLDKLAGKEANSDIKYTI"
     gene            complement(1312..3324)
                     /gene="glgX"
                     /locus_tag="PXD69_000002"
     CDS             complement(1312..3324)
                     /gene="glgX"
                     /locus_tag="PXD69_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HDL6282257.1"
                     /translation="MHYFRGKPFPLGNKLDRQAGEFGTNFAIVSQNATAIELCLFDEN
                     HHETRIPMFSSGDTWHIFVAGVQAGTKYGYRVKGIQDEQAGLLFNPQKLLTDPYAKAI
                     EGKPDLSSAEAAAWYKWNDERDNASLAPKSIVIDEHFDWENDSQLFTPWAETIIYEMQ
                     VKGFSQRNFQIPSDIRGTFAGLAHPVSIDYLKTLGITAVELLPVTYHIDETHLQKQGL
                     VNYWGYNVLGNFAIDPNLAADKQNPLKEFKQLVKTLHQAHIEVIMDIVFNHTAESDKN
                     GPMLSFRGIDNTAYWLDKQGEYENWTGCGNTLNLSNPYILCWAIDCLIYWVEECHIDG
                     FRFDLASILGRTPSFSEKADFFTALKSHSKLTHIKLIAEPWDIGVEGYQLGQFPEPFY
                     QWNDCYRDDIRRFWLQNQGDWGLLARRLAGSDDVFTKYSVSKSINFITAHDGFTLQDL
                     TSYQQKHNWANGEQNRDGHNSNYSNNHGVEGQTADELVKKQREITACSLLATLFLSAG
                     VPMLLAGDEIGHSQQGNNNSYCQDNEITWLDWENMNHTRLDYVRSLIRLRKKIALLSK
                     QNNWWQEDSVQWLNPSAQLMNIDDWHNQHNGLVVLLQEEWLLLFNANRQPQPFLLPQG
                     NWKVVLEQAQGILMTDTQAVTLNNMGVCVLQKSDVMFANKLETQYA"
     gene            complement(3348..5570)
                     /gene="glgB"
                     /locus_tag="PXD69_000003"
     CDS             complement(3348..5570)
                     /gene="glgB"
                     /locus_tag="PXD69_000003"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HDL6282258.1"
                     /translation="MQDYTYSEKDAFFVERLSSGSCNDPFSYLGIHPSNNGVIIRVFL
                     PSAIACQVIDLNGKPVSSMLKIDDRGFFIAELIGKKTDFSYRLLVEYPDSTVDIEDPY
                     RFKTHIQELDNWLFAEGKQLRPYEKLGAHLVTQNEVGGVHFSVWAPNAQRVSVVGDFN
                     HWNGLVHSMRFHPDSGIWDIFLPNVKKGECYKFEVLDRNGVLRLKSDPYAFASQFRPE
                     TASIVSGLPSIVPAEKTCRNANAPDKPISIYEVHLGSWRRNIENNYWLSYEELADELI
                     PYVKDMGFTHIELLPISEFPFDGSWGYQTTGIYSPTSRFGTPEGLSYFIQKAHDKGIG
                     VILDWVVGHFPVDEHGLVYFDGTHLYEHSDPKEGYHKDWNTLIFSYGRNEVSNYLSGN
                     ALYWIERFGIDALRVDAVASMIYRDYSRSDGEWIPNKYGGRENLEAIDFLRHTNNILR
                     DESQGGASIAEESTSFAGVSHSTERGGLGFNYKWNMGWMNDTLRYMQKDPIYRRYHHN
                     LMTFGMTYQYSEQFVLPLSHDEVVHGKGSLLNKMPGDCWQKFANLRAYYGYMWGYPGK
                     KLLFMGNEFAQGKEWNFAESLDWYLLGEEGGEWHKGVLGWVKALNHLYTQTPALFEQD
                     YNPEGFEWLVVDDHDNSVFAFERKAKNGDSVIVVSNFTPIVRENYRFGVNELAEYQEI
                     LNSDLACYCGSNVSNANRFASELIASHGKAYSLSITLPPLSTIFLKRAADKKTKQNKT
                     "
     gene            5858..7336
                     /gene="fruB"
                     /locus_tag="PXD69_000004"
     CDS             5858..7336
                     /gene="fruB"
                     /locus_tag="PXD69_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HDL6282259.1"
                     /translation="MLNLSAKNIRLNGSASNKEEVIRFVAAELVAKGNVAAGYEVGML
                     NRETQTSTFLGNGIAIPHGTLDTRDLVKETGVQIIQLPQGVEWGEGNTAYVVIGIAAK
                     SDEHLTLLRQLTTVLSDEEAAATLAKTQNLDEFIAVLSGKKNLPALSQELISLNIESS
                     SPITLSAINAAKLQEQGYVSQAFISDVVANKALHLGNNLFVVDSAKGNQANGIAIARN
                     TQGQTLLTVAETDNALQPLLTQLLKPEVRSQFAHFSAEQMLGLLKGESVASTPVTNVE
                     ASGNQVVGTFTIRNDNGLHARPAAVLVQTVKPFSSKISVENLDRNTAPASAKSAMKVV
                     ALGASQGHRLRFVAEGEDAQQAIEALQQAIINGLGESVSFVPAVADTIESIAVSAIPA
                     EETATAVDANTKEATFVIKNEHGLHARPSAVLVNEVKKFNAKIEVQNVDKNSPLVSAK
                     SLMKIVALGVTKGTTLRFVASGDDAEVALAAIGAAIEAGLGE"
     gene            7350..8294
                     /gene="fruK"
                     /locus_tag="PXD69_000005"
     CDS             7350..8294
                     /gene="fruK"
                     /locus_tag="PXD69_000005"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDL6282260.1"
                     /translation="MRIATVTLNPAFDLVGKLQRIEIGEVNTVETLGLYPAGKGINVA
                     KVLADLGTKLSVTGFLGEENQGDFVNAFKHNDLADEFYRINGKTRINVKITETEADVT
                     DLNFLGFEISESDWEKFVTLSHQWESKFDLVAVCGSLPRGVTPEKFASWLESLHRQGL
                     KVVLDTSNAALTAGLTAHPWLVKPNRRELEVLVGHSLNSIEEIISAAKQLRSRGIENV
                     IISMGEQGSLWLNHEGVLQARPPRCENVVSTVGAGDSMVASLIYGLSQGWSKEQTLRF
                     ASATSALAVVQSNVGIADRAALDDIIKQTDITVISENH"
     gene            8320..9984
                     /locus_tag="PXD69_000006"
     CDS             8320..9984
                     /locus_tag="PXD69_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL6282261.1"
                     /translation="MNISFVFPQTLGNARRFLVNEMLSAAAKQQGHNVVAANQADFVV
                     LFDNAIPQEAAGKQGAILDLEQAFAQPEASLKQAVENAQTFANATATTAVSAVSSGVK
                     NIVAVTACPTGVAHTFMSAEAIENYAKAQGWNIKVETRGQVGAGNPISAEEVAAADLV
                     FVAADIDVDLEKFKGKPMYRTSTGLALKKTTQEFEKAFAQAKIYEGGVAKADNAEAPT
                     SEKKGLYKHLMTGVSHMLPLVVAGGLLIAISFMFGIEAFKDETIAGGLPKALMDIGGG
                     AAFHLMIAVFAGYVAFSIADRPGLAVGLIGGMLATTAGAGILGGIVAGFLAGYTVKFL
                     NGAIQLPASLTSLKPILILPLLGSAIVGLLMIYVINPPVKALMDALVEWLNTMGQTNA
                     IILGIILGAMMCTDMGGPVNKAAYTFGVGLIASQQYMPMAAVMAAGMVPPIGMAIATL
                     IARSKFNTNQRDAGKASFVLGLCFISEGALPFVAADPVRVIASSILGGATAGAISMAL
                     GITLQAPHGGLFVIPFVSQPLMYLAAIAIGSLVTGVVYAAIKQKAE"
     gene            10151..10669
                     /locus_tag="PXD69_000007"
     CDS             10151..10669
                     /locus_tag="PXD69_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lhr family helicase"
                     /protein_id="HDL6282262.1"
                     /translation="MILLRGDTMQFIEFTDPDSGISYQYSEFTIANVAFIINFCSDAD
                     VISTLSALGKDITNYINTYSCCTIKFMAKEHLENSGSNIDIYAPAANHQFKRKEIIAL
                     QETLERLLFEHYVRFTPESYLFIAERDSLNRMYQRMCVPRCDFMQSFQVVYPLGVNQD
                     CFILITPKGNLK"
     gene            complement(10822..11685)
                     /gene="rarD"
                     /locus_tag="PXD69_000008"
     CDS             complement(10822..11685)
                     /gene="rarD"
                     /locus_tag="PXD69_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL6282263.1"
                     /translation="MLKGILASLAANVLFGAVYYFAILLRPLEGEAMFGFRIVVVIPF
                     ILLAIILFKQQSAFADLLQKIRQNPPLVLVILLLALNTGVQLWLFLWAPNHGQALQVS
                     FGYLLLPIVAVALGKMVFKEHFTRLKWLSLLFAVIGVGSSLFFNSTISWATWVAGLGY
                     PLYITLRRYFQINTLATFFVELLLVLPVALYYLSQVEMTPIVAENPQIYFYLGLLGLV
                     SGSAFILYILSSNLLPINVLGLLGYVEPLVMLLISFAIGEKLDANSYILMVCLLVSIG
                     LLSWDSFRSKV"
     gene            11863..12447
                     /locus_tag="PXD69_000009"
     CDS             11863..12447
                     /locus_tag="PXD69_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HDL6282264.1"
                     /translation="MKKIFWILLIAMLAVGGYSLTKYNDLMRAEEDINSVWGNVESAY
                     QRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDPSNATEEQMAKFQEAQQ
                     GVNSALSRLLVSVEKYPELKAHEAFLNLQAQLEGTENRINVERNNFNEKVKEYNKQVR
                     EFPTKLAAMIMGFKAKPQFKSEAGSDKAPTVNFN"
     gene            12529..12987
                     /locus_tag="PXD69_000010"
     CDS             12529..12987
                     /locus_tag="PXD69_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL6282265.1"
                     /translation="MGLFSFLSNKLPIDTQRIEQAIADLEQKTSAELRVVVERKAKIG
                     KTDNAAMLRASELFDELKMRETAEHNGVLIYLSFKPHYAAIIGDEGIHQKVDNDFWQK
                     IYATMCLDCQQGDYTQAICDAIKMVEAPLAHHFPYQADDKNELSNEVVVK"
     gene            12984..13841
                     /locus_tag="PXD69_000011"
     CDS             12984..13841
                     /locus_tag="PXD69_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL6282266.1"
                     /translation="MMKSLCKFLSIFNRLLLVCLALFSLNATAVTYPEPPNPFYYITD
                     YTKNTLSQQEWRTLEDALIANCAKTSSQIAVVIIPSTEGEAVSTYAHTLFNKWGIGRS
                     KNNENNGILLLIAKNDRKLFIATGRGLEGALPDAIASSIIRNDITPFFKQEQYAAGIA
                     HGLSAIMAAINGEYAPYASYGEEMQEFDDIDGLLFFLFAGIVIFLIFRPRGNSTYISP
                     SSMDQLGQILRESQRRGGGFGGGLGGGFDRGSGGFGGGFGGGFGGSRGSGDSFGGGSS
                     GGGGAGGSW"
     gene            complement(13956..14435)
                     /gene="ispF"
                     /locus_tag="PXD69_000012"
     CDS             complement(13956..14435)
                     /gene="ispF"
                     /locus_tag="PXD69_000012"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDL6282267.1"
                     /translation="MIRIGHGFDVHAFGEDRPLMIAGVEVPYHTGFIAHSDGDVALHA
                     LTDALLGAAALGDIGKLFPDTDMQYKNADSRGLLIEAYRQVQEQGYQVGNVDVTIIAQ
                     APKMRPHIDKMRQVIADDLQCDISQVNVKATTTEKLGFTGRGEGIACEAVALLLKRA"
     gene            complement(14437..15120)
                     /gene="ispD"
                     /locus_tag="PXD69_000013"
     CDS             complement(14437..15120)
                     /gene="ispD"
                     /locus_tag="PXD69_000013"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDL6282268.1"
                     /translation="MKRKIIAVIPASGVGSRMQAEKPKQYLQLKGKTILEHTVSIFLE
                     HPHVEKVIVAVARKDPFYSTLELLKSPKIQLVFGGETRADSVLNALQEINTENAWALV
                     HDAARPCLKRSDLDKLLQINDPQGGILAIPAVDTMKRANGTKIAHTEDRSTLWHALTP
                     QFFPAQALKQALSSAFANKLQVTDEASAMELAGYQPQLVSGRSDNIKITRPEDLALAE
                     FYLTHNLEN"
     gene            complement(15138..15416)
                     /gene="ftsB"
                     /locus_tag="PXD69_000014"
     CDS             complement(15138..15416)
                     /gene="ftsB"
                     /locus_tag="PXD69_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HDL6282269.1"
                     /translation="MRLLITFFALLLGFFQYSFWFGKNGWSDYQEVQEEIALLKVENT
                     KLTSRNKLIEAEIYDLKNGVDALEERARLEREMVKENEMFYRIVPKNK"
     gene            15691..17298
                     /gene="pckA"
                     /locus_tag="PXD69_000015"
     CDS             15691..17298
                     /gene="pckA"
                     /locus_tag="PXD69_000015"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDL6282270.1"
                     /translation="MLNRIEQELADLGITNVKEIVRNPSYEQLFEEEMKSDLKGYEKG
                     VLTNLGAVAVDTGIFTGRSPKDKYIVLDETTKDTVWWTSDAAKNDNKPMTQSTWQSLK
                     TLVTDELSNKRLFIIDAFCGASPEHRINVRIITQVAWQAHFVKNMFIRPTEEELKDFK
                     PDFVVMNGSQVTNPNWKEQGLNSENFVAFNITEGVQIIGGTWYGGEMKKGMFSMMNYF
                     LPLKGVASMHCSANVGEEGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDENGVFN
                     YEGGCYAKTINLSIENEPDIYRAIRRDALLENVVVREDGTIDFDDKSKTENTRVSYPI
                     YHIDNIAVPSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERG
                     ITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMEAAGAEAYLVNTGWNGTGKRISIKDT
                     RGIIDAILDGSIEKAEMSTLPIFNLAIPTALPGVETHILDPRNTYEDKAQWQAKAEDL
                     AGRFVKNFEKYATNEEGKALIAAGPKL"
     gene            17391..18392
                     /gene="bioB"
                     /locus_tag="PXD69_000016"
     CDS             17391..18392
                     /gene="bioB"
                     /locus_tag="PXD69_000016"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDL6282271.1"
                     /translation="MTTFQLRLKAKDELTPHPTAQYWRKCQVEGLFDLPFMDLVFRAA
                     QVHRENFDANAIQLSTLLSIKTGGCPEDCEYCPQSARYDTGIEKQTMLDVETIVEKAK
                     IAKERGASRFCMGAAWRGPRPKDIKVVSEIINAVKSLGLETCGTFGMLEEGMAEELKQ
                     AGLDYYNHNLDTDPERYNKIIHTRNHEDRMDTLGKVRNAGLKVCCGGIVGMNETRPER
                     AGLIASLANLDPQPESVPINQLIKVEGTPLTNAEDLDWTEFVRTIAVARITMPQSFVR
                     LSAGRTTMPEAMQALCFMAGANSIFYGDKLLTTENPEEDHDRQLMDKLDLYPLQYIA"
     gene            18552..18649
                     /gene="ffs"
                     /locus_tag="PXD69_000017"
     ncRNA           18552..18649
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="PXD69_000017"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            18684..19391
                     /gene="gloB"
                     /locus_tag="PXD69_000018"
     CDS             18684..19391
                     /gene="gloB"
                     /locus_tag="PXD69_000018"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HDL6282272.1"
                     /translation="MLQITPIPALKDNYIWAIRNGQDVIIIDPSEHQPALNFIAKNAL
                     NLTAILITHNHHDHTDGVSGIVEQYPNIPVYGPQEVAEFANVIVSPEQHISLFGYDVR
                     IIESGGHTAGHISYLFGYDYLFCGDALFSGGCGRVFTGDYQAQFDALQRFKNLPNSVK
                     AYPAHEYTKSNLKFAEAVLPPSCVLSEYQEQVDLLRSQNKPTLPTTIGLEMQVNPFMQ
                     AVDLAEFIALRQQKDNF"
     gene            19550..20263
                     /gene="uppS"
                     /locus_tag="PXD69_000019"
     CDS             19550..20263
                     /gene="uppS"
                     /locus_tag="PXD69_000019"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDL6282273.1"
                     /translation="MNFDPQNMPKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSA
                     VSFAAKHHIQVLTLYAFSSENWSRPETEVSALMSLFMKALDSEVKQLHKNNIRLKIIG
                     DKSAFSENLQKRIAESEKLTENNTGLILNIAANYGGYWDIVQAAQQLAVHVKSEQLAV
                     EQITPALFQQHLVTENQPQVDLLIRTSGEQRISNFLLWQIAYAELFFSPVLWPDFNDE
                     AFSDAIYAYQQRERRFGGC"
     gene            20287..21156
                     /locus_tag="PXD69_000020"
     CDS             20287..21156
                     /locus_tag="PXD69_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDL6282274.1"
                     /translation="MLKERVLSAIIMIIAVLAAIFWLSPLPLTLVLSAIVVAAMWEWA
                     QFAGFKHPVPRAIVAMVTICLLLFAIVANTDYIRATRFITDETTPILFIGCIWWLIAL
                     VLVATYPNSAKLWEKSVAAKFLFGLATLVPFLIGTLALRFHNYAFDPYQGTYLFLYVC
                     LLVWGADSGAYFAGRAFGKRKLAPKVSPGKSWEGVIGGVLTSSLIAFTFLQLTPANVF
                     GKALATTPFILVSVGMVAISVLGDLAESMFKRQAGIKDSSQLIPGHGGILDRIDSLTA
                     AVPFFATFFFFVL"
     gene            21160..22470
                     /gene="rseP"
                     /locus_tag="PXD69_000021"
     CDS             21160..22470
                     /gene="rseP"
                     /locus_tag="PXD69_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDL6282275.1"
                     /translation="MTSIIAFFILICVLVFVHEYGHFWAARKCGVKVIRFSIGFGKVL
                     FKKKDKQGTEFVFSLIPLGGYVQMWNDETDINAPAQQALNTKSVLQRAFIIIAGPAAN
                     FIFAILAYWVVFIAGIPTVKPVIGEILPNTIASQARIPTELEITKIGHQSIQDWESAS
                     LALVGFVGNKNVPLEGNINGNSTQKYELDLSNWSIDSAKENPLTALGIRPKSAKVTAE
                     IKQVVENSPASQVGIQAGDRILQINQQPFNWFNLVELVQAGKPIELKIEQRGQIKDLV
                     VQPEKKDERYIIGVIPSYEPLADKYRTELKYDILTAFYKSIEKVWSLTQTILQFIGNL
                     ISGDLSIKNLGGPISMAKGAGATAEIGLVYYLSFMALISVNLGVMNLFPLLPLDGGQL
                     VLLAVEAIRGKALSEKIQLKFQQIGFAFVLSLMLFAFANDIIHF"
     gene            22585..24966
                     /gene="bamA"
                     /locus_tag="PXD69_000022"
     CDS             22585..24966
                     /gene="bamA"
                     /locus_tag="PXD69_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDL6282276.1"
                     /translation="MKKLLLSSLLIANGVVAAPFVVKDIRVEGVQPTTGESIISSIPV
                     RVGQTATDTDVSNVVRHLFSQQRFADVRATREGNTLVIKVAEKPIIGKVEIEGNQAIP
                     KDALEQNLKANLINQGEIFDAAKLEAFKEGLIEHYHSTGRYEAKIDTSVSNNTEGGVN
                     IKLAINEGEVAKAKTIKFEGNNAFSDKKLLENLDIQPDVSWWNIFESSKFEQTAYQKD
                     LETLRDFYLNRGYAKFAIQDTDVQFNDNKTEVALTYKLDEGSQYHVSEMRIIGNTANM
                     DSQLNALLKEFKPGQLFRKSDLTQIEEEIKSILGDAGYGSAKVDIYPQFNEENKTVKI
                     SFVVDAGRRIYVRKIRFEGNGVTADSTLRREMRQQEGAWLSTNKASLGKARLERTGFY
                     ESVDMSMPNVEGTADQVDVVYKIKERNTGSINFGIGYGTKNGISYQAGIKQDNFLGMG
                     STISLNGTRNNYGTSVNLGYTEPYFTKDGVSLGGNIFYEDYDNSDNDSMASYKRQTYG
                     INGTLGFPVNENNSYYLGLGYTHDKIKNAAREYTREKYVKSMNFEFDPAADYYKKIKA
                     DDFDFSLGWNYNSLNRGYFPTEGTTANIGGKITIPGSDNKYYRVSADFRNYYPLNREH
                     KWVISTKASIAYTNGFGGKEVPFYQLYTAGGIGTLRGFSYGAVGPQAIYYNTKSGKFD
                     SMNNDIIGGNALAAASLELITPTPFVSEKYQHNVRTSLFVDAASAWNTKWKKDEYTNL
                     PDYGDFKRFRASAGIAFQWMSPIGPLSFSYAKPIRKYDNDDIEQFQFNIGSSF"
     gene            25046..25837
                     /locus_tag="PXD69_000023"
     CDS             25046..25837
                     /locus_tag="PXD69_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HDL6282277.1"
                     /translation="MKKLFKMTGLAVALASTTGIANAADTIGFVDPSYVLQNHPVLLD
                     ASAKFDKFMKESQEKFAADEKKLADENKTLTAERNKINEDAQKLQNEQKNVEASIKKK
                     VAALEKDAPRLRSKEIQARQNAIQKEANAFQAKVTAIQKREADFAKKAEAFQKRADEF
                     QKRIEQANKENGGINPQEAQKQAVDEVNATIKEIAKSKGYTLVLQPQVALYAEDEGKD
                     ITEAVLDAIVKKHPEIKIEKPATEAQPATEKETKAEETKPEEAKK"
     gene            25837..26862
                     /gene="lpxD"
                     /locus_tag="PXD69_000024"
     CDS             25837..26862
                     /gene="lpxD"
                     /locus_tag="PXD69_000024"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDL6282278.1"
                     /translation="MANFRLIDLAEHIGGTLRGNADLAIQSIAALDKADSSQITFISN
                     AKYRENLTACNAGAIIVSPADVEFCRADQNLIIVANPYVAYAQLAQYMDSTPKAASEI
                     HPSAVISPEAKLGNNVSVGANAVIESGVELGDDAVIGAGCFVGKNSKIGARTQLWANV
                     SVYHNVQIGADCLIQSSTVIGSDGFGYANDKGQWIKIPQTGGVIIGNRVEIGACTCID
                     RGALDPTVIEDNVIIDNLCQIAHNVHIGFGTAVAGGVIMAGSLKVGRFCQIGGASVIN
                     GHMEICDGAIITGMGMVMRPITEKGIYSSGIPLQTNKEWRKTAALVMNIDEMNKRLKS
                     LEKRFND"
     gene            26891..27349
                     /gene="fabZ"
                     /locus_tag="PXD69_000025"
     CDS             26891..27349
                     /gene="fabZ"
                     /locus_tag="PXD69_000025"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDL6282279.1"
                     /translation="MTTENREPNIIEVTEIMDMLPHRYPFLLVDRVTDYEEGKWLKAI
                     KNVTFNEPCFTGHFPGAPIFPGVLILEAMAQATGVLAVATYGKLSEDELYYFAAIDNA
                     RFKRPVVPGDQLQLEVEFLKEVRGITKFTGKAYVDGKLVCEADLMCARRK"
     gene            27383..28177
                     /gene="lpxA"
                     /locus_tag="PXD69_000026"
     CDS             27383..28177
                     /gene="lpxA"
                     /locus_tag="PXD69_000026"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDL6282280.1"
                     /translation="MRLIDSTAKISPLAIIEEGAEIGAHVEIGPFSVIGKDVKIGART
                     KIHSNVVINGMTEIGEDNHIFQFASIGEINQDLKYQGEPTKVVIGNRNRIRESVTIHR
                     GTVQGGGVTKIGDDNLFMINTHIAHDCSIGNRCIIANNGTLAGHVTLDDFVIVGGMSA
                     IHQFVVIGSHVMLGGGSMVSQDVPPYVMAQGNHARPFGINFEGLKRRGFDKPTMHAIR
                     KVYKLIYSSGKTLEECLVEIEQIAATEPAIAIFKQFFKRSTRGIIR"
     gene            complement(28215..30215)
                     /gene="mnmC"
                     /locus_tag="PXD69_000027"
     CDS             complement(28215..30215)
                     /gene="mnmC"
                     /locus_tag="PXD69_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDL6282281.1"
                     /translation="MGKLTFATLTFNDADTPVSEQFDDIYFSTQDGLAESYYVFQEGN
                     QLWEKWQSHPKEAFVIAETGFGTGLNFLAVADKFQQFRAAFPQSKLKRLYFISFEKFP
                     LTASQLADIHQRYPQFATLSENLTACWQPRQIGCQRYHFEQVYLDLWFGEIAENLPQL
                     GDLYSGTIDAWFLDGFSPDKNPEMWNEQLYLQMFRLSANGGSFATFTASSMVRRGLEA
                     AGFAVKKRKGFGKKREMLWGEKPLDSQVSEPNYPYFYAKNETADDIAIIGGGVASFFV
                     ALSLLEKGKQVTLYCKDETLAINASGNLQGAIYPQLSDDDERNVQFYIHSFDYALQRL
                     QQLKSNIEFEHNLSGVVLYAYDEKTAKKLEKMVEQTADDTLLKSCSQAELSEKLGLSV
                     PNSGAFIPQAGWLSPVQLVRNGFTWLEQKGLKIVLNHKVEHLTFSNGMWQWQTRGETV
                     RHQAVVLANGHTLNEFSQANGIPLYPVRGQVSQIPTTSELQKLKCVLCYDGYLTPMSA
                     YGTHCIGASHIRDNAETEFSLSEHWENVAKLQQNVTVCEWTQGIDLSENKAKVGIRAA
                     FRDRVPMVGAVHHFEQQKSQYANLYNQLRRKQAVENAEIFTNLYMVNGLSSRGLTTAP
                     LLGELLASLIVNEPVPISEDIWHNLSPNRAWIRKLLKGSTVA"
     gene            complement(30440..31876)
                     /gene="trpCF"
                     /locus_tag="PXD69_000028"
     CDS             complement(30440..31876)
                     /gene="trpCF"
                     /locus_tag="PXD69_000028"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HDL6282282.1"
                     /translation="MQNIVQDNAQPNQPTILQKIVQDKAIWVAQKEQAFPLSEFQHKI
                     VKSDHDFYAALAKGTHQEPAYILECKKASPSKGLIRAEFDLDSIAQVYKNYAAAISVL
                     TDEQYFQGDFRYIDQVKRQTTQPILCKDFMISAYQVYLARFYNADAILLMLSVVNDET
                     YRELATLAHELGMGVLTETSTEAEFERALALGAKVIGVNNRDLHTLTIDMNRIVRLVE
                     KYQAQISADVCLISESGINDHQQVKNIKPYVHAFLIGSSLMGSADLNNAVRAVIFGEN
                     KVCGLTRVQDVKAVYEQGALYGGLIFAEGSPRQLSLRQAQELVVNAPLRYVGVFQNQA
                     VEFVEKMAKQLELFAVQLHGSEDEQYIAELAEKLGSKTQIWKALSVDVEVENLEFNDN
                     PQIARYVLDSKVGNQQGGTGKTFNWALIPETLKQKALLAGGIGTENIEQALAQGCVGL
                     DLNSGVESAKGVKDLQKLTACFGKIIQA"
     gene            31964..32275
                     /locus_tag="PXD69_000029"
     CDS             31964..32275
                     /locus_tag="PXD69_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HDL6282283.1"
                     /translation="MKSQVIQHLSYLEIALRVNQLWEATPPSPEALANEQPFCVETLT
                     PTQWLQWIFIPRMRAILDANADLPRNFAITPYLEEALKNEGYLQAICEPLLGLEKLLK
                     D"
     gene            32429..33157
                     /gene="truC"
                     /locus_tag="PXD69_000030"
     CDS             32429..33157
                     /gene="truC"
                     /locus_tag="PXD69_000030"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HDL6282284.1"
                     /translation="MTLDILYQDNSLIAINKPAGVLVHRSWLDKHETVFAMQTLRDQI
                     GQHVFPIHRLDRPTSGVLLFALNSETARIMSEQFEQHLVQKTYLAVVRGYLQGSAQID
                     YPLKVILDKIADKFSQEKEAQAAITDYKGLATVEMPYPVGKHQTSRYSLVELSPKTGR
                     KHQLRRHLKHLFHPIMGDSKYGDLHQNRALVEKSGVSRLMLHAHKLQFQHPKNLQKIE
                     IIASLDEQWQRLFAFFDWNFTQYY"
     gene            33175..33339
                     /locus_tag="PXD69_000031"
     CDS             33175..33339
                     /locus_tag="PXD69_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HDL6282285.1"
                     /translation="MDNSLLSLTHEQQQAAVEEIQKLMAQGISAGEAIQIIANQLRDK
                     YQILEKSNNE"
     gene            33332..33808
                     /locus_tag="PXD69_000032"
     CDS             33332..33808
                     /locus_tag="PXD69_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282286.1"
                     /translation="MNKLWTVLALTITSHYSFAAAEKIVTKDLPAEGKPAVVLQVFDE
                     SEKIAKPIKGNKLFISKKQTRLCWHSINLPVQNKVTIAEAFYAPAAMKLASPGSKINS
                     SADKKNHTIITEINLANNQVLNRCWGFDKTDPVGKYKMEIQINDHIFKGLEFEIVK"
     gene            complement(33845..34696)
                     /locus_tag="PXD69_000033"
     CDS             complement(33845..34696)
                     /locus_tag="PXD69_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDL6282287.1"
                     /translation="MENQKQAEIELKIMLEQQNVALVENYLNQTSPFPVLAHQTELLG
                     NTYYDTPEQFFATQKMGLRVRSVNQQYEITLKTQGEIVGGLHIRPEYNLALPNSQPDF
                     QTLVEKYQLPFENSEQIAESLQAIFSTDFTRKTWLVQVGMSDIEVALDQGIIKNHFGE
                     EPICELEFEIKQGNLGDLFTLVEAMPKADGMWLSNLSKAQRGYLLGQAVKWEQKIATA
                     MDGENSEKLTQLLADFICVGNESLEVLVRFNQCTQQQFSNWQQARAFVKSKDYLLHNL
                     TNLKTMI"
     gene            34757..36166
                     /locus_tag="PXD69_000034"
     CDS             34757..36166
                     /locus_tag="PXD69_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HDL6282288.1"
                     /translation="MFSKIHHKLNNFVQRGLDNHLRLAVTGLSRSGKTAFITSLVDQL
                     LHINKGGNSHLNLFAPARHGQILSVKRVEQGDLTIPRFEYDKNRQSLENQPPQWPEST
                     TGISEIRLAIRYQRQHSLLRHIKETGTLYLDIFDYPGEWLLDLPLLSLSYKEWSQTQQ
                     TIHKDERAELATPWLQAVKKLDLFAKTDENLLAEFSQQYTDYLLACKAQGMQYIQPGR
                     FVLPTENAKGAPVFQFFPLLDLSEAEWEKLEQSDRNSIFHTLKKRYEHYQKKIVKPFY
                     EDYFSQFDRQVILADCLTPLNYGYNEFMEMKLGLQQLFKHFHYGNRSLFHRLFSSNID
                     KLLFIATKADHITSDQVPNLESLMRQLVQEGGRHAEFDGIETGYLAISSIQATDAVKV
                     TQQDKIIKAIRGIRSSDRKQVTLYPGSVPNRIPDKNYWQFNRFEFDQFEPKQLDYSQA
                     IPHFRMDSVLQFLLADMFE"
     gene            36212..36562
                     /locus_tag="PXD69_000035"
     CDS             36212..36562
                     /locus_tag="PXD69_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6282289.1"
                     /translation="MNTVISQRKPIHWVGSTLDDIREFPDNIKRELGFDLDLVQQGLL
                     PRDFKAMANLGSGVMEIRVKDPSGAFRLVYLAKFKDAIYCLHAFQKKTQKTAPKDIAV
                     IKARYAAVKELENE"
     gene            36555..36878
                     /locus_tag="PXD69_000036"
     CDS             36555..36878
                     /locus_tag="PXD69_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL6282290.1"
                     /translation="MNNIDTKIRHTTEAQGNVFEDLGFPIDEAQKLKSASQQLIETKL
                     MLMNEMSNWIDKNNLKQSEAASILGVSRPRISDMVNGKLEKFTLDTLVTFVAKTGKTI
                     QLQLS"
     gene            36986..37465
                     /gene="smpB"
                     /locus_tag="PXD69_000037"
     CDS             36986..37465
                     /gene="smpB"
                     /locus_tag="PXD69_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDL6282291.1"
                     /translation="MAKKPKVASNTIALNKRARHEYFIEDEIEAGLELQGWEVKALRA
                     GKGNISDSYVIFRHGEAFLFGAMITPLNMASTHIVSDPTRTRKLLLNKRELDSLFGKV
                     NREGYTIVATSMYWKNAWVKVKIGLAKGKKLHDKREDIKDREWQVAKQRIMKNANRG"
     gene            37668..38975
                     /gene="serS"
                     /locus_tag="PXD69_000038"
     CDS             37668..38975
                     /gene="serS"
                     /locus_tag="PXD69_000038"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDL6282292.1"
                     /translation="MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVK
                     TETLQAERNTRSKNIGAAKARGEDISALLAEVDSMGNELDTAKVELDKVQAEIRELLL
                     SVPNLPADEVPLGKDDSENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTA
                     SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDL
                     FHTQPLTGQDPNEVQRPFGLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAG
                     SYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCT
                     GDMGFGAAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTL
                     NGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLEVITA"
     gene            complement(39034..39360)
                     /locus_tag="PXD69_000039"
     CDS             complement(39034..39360)
                     /locus_tag="PXD69_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282293.1"
                     /translation="MVSVDFKNNLLEFIFYGLFSEHTQTNIINGLQFYPKAGVAFRKD
                     LRFRKRAVYQREIMVFYQLDKIDEPKKVTIIAFRLGRMKNPIRLDTVQNRRVVTEIFM
                     NYPEKD"
     gene            complement(39353..39565)
                     /locus_tag="PXD69_000040"
     CDS             complement(39353..39565)
                     /locus_tag="PXD69_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282294.1"
                     /translation="MSIVIVDTDFVVHKEDEEWTTEEIKMIEEHLLEEQSAQYQVKRE
                     VPKQFYADIAERLSRGDLTAWEQLDG"
     gene            39752..42337
                     /gene="leuS"
                     /locus_tag="PXD69_000041"
     CDS             39752..42337
                     /gene="leuS"
                     /locus_tag="PXD69_000041"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDL6282295.1"
                     /translation="MQQQYNPSEIEPKVQRYWAENKVFKAVKDVTKEKYYCLSMLPYP
                     SGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAVKNNTAPAKWTY
                     ENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYKKTSTVNWCP
                     NDETVLANEQVHEGCCWRCDTPVEQREIPQWFIKITDYAEELLNQLDNLPQWPDQVKT
                     MQRNWIGRSEGVEITFKIAGSNVELPVYTTRPDTFFGVSYVAIAAAHPLAELAAQNNP
                     ALAEFIREAKNTKVAEAELATMEKKGMATGLFAIHPLTGKEVPVWVANFVLMHYGTGA
                     VMAVPAHDERDFEFAQKYDLQINQVIQPLDGSEWDFSKAAYTEHGKLINSAEFDGLEF
                     DVAFTAIADKLEAMGVGKRQVNFRLRDWGVSRQRYWGAPIPMMTTEEGEVVTVPLQDL
                     PVILPEDVVMNGVQSPIKADPEWAKTTYNGKPALRETDTFDTFMESSWYYARYTCPQY
                     HEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATKLLCQ
                     GMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPQGRELVHSGMTKMSKSK
                     NNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGAKRFLGRVWNLVYSYAQ
                     NPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKLTKAP
                     LETEQDKAVMAEALSAVVRMLYPITPHICFELWQVLGNEQTIDFAPWVQADESAMVED
                     EKLVVVQVNGKVRGKITVSATATEDEVKAIAKADPNVAKFLDGQQIVKEIYVPFKMLS
                     FAVKA"
     gene            42537..43025
                     /locus_tag="PXD69_000042"
     CDS             42537..43025
                     /locus_tag="PXD69_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282296.1"
                     /translation="MIKKLSLIAVFALTACGWHFKNNEVLPESFRTLTFESADQHSEM
                     SRILRNQLQLSDVKLVPSTANVAKLRLVSTSTDSKVVSVFKQAREAEKILTLNVDAIA
                     DIPNKGQYPLEVSVHRTFFDDSRAALAKSAEKEMIMKDMYEQASRQLIIKMAGLKKEL
                     SK"
     gene            43068..44093
                     /gene="holA"
                     /locus_tag="PXD69_000043"
     CDS             43068..44093
                     /gene="holA"
                     /locus_tag="PXD69_000043"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDL6282297.1"
                     /translation="MQKIFPETLQFSLNKGLQPFYLLTGNDLLLVNETKDAIIHTARL
                     NGFDEKKEVEIKNDTNWEELFEAAQSMGLFFARQIMVLNFPDSPTATQFKKLAELCAF
                     IHSDLLFILHLPKFSKTMEKQAWFTQIELNLVQINCQTPELSKLPQWVSHRAKAMNLQ
                     IENEANQLLCYSYEGNLLALKQALQLLQLNATDGKITLTKAQEVVEHSAQFTPFQWID
                     ALFEGKIQRAQRILYHLQNEEVQAVVLLRIVQKELMILLEITRNPTAVVSSEQSLFIG
                     NLRTEFDRLKIWQNRRPFYNQITQRLTYQKLYALIQQLAELERKVKQEFSDDIWQELE
                     RFSAQFT"
     gene            complement(44094..44279)
                     /gene="yacG"
                     /locus_tag="PXD69_000044"
     CDS             complement(44094..44279)
                     /gene="yacG"
                     /locus_tag="PXD69_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HDL6282298.1"
                     /translation="MPETIVNCPTCEKEVVWSKESKYRPFCSERCQIIDLGDWAAEKH
                     SIASEEAELFSEDLEKY"
     gene            complement(44261..44896)
                     /gene="coaE"
                     /locus_tag="PXD69_000045"
     CDS             complement(44261..44896)
                     /gene="coaE"
                     /locus_tag="PXD69_000045"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDL6282299.1"
                     /translation="MTYVVGLTGGIGSGKTTVSDLFSALGVEVIDADVVARQVVEPGT
                     PLLAKIVEHFGEEILTAEKALERTKLRQIVFNNEEEKTWLNNLLHPAIREEMVKKLQE
                     STACYVIWVVPLLIENKLTEYCDRILVVDVSPEIQLERATKRDNSKIETIKNIMAAQV
                     SREERLSYADDVIENNLPFEQGLLLIKEQVQALHYKYLALAKKEKECQKLL"
     gene            complement(44932..45588)
                     /locus_tag="PXD69_000046"
     CDS             complement(44932..45588)
                     /locus_tag="PXD69_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDL6282300.1"
                     /translation="MLILFSLFIAVWLKAEIPRFAIRVNRQIYQETTSLVNIGLTEQQ
                     FLAQSVLQPKQPRSANLFFLLFPLIMLCSESPIIGTIFILLCFLSLLDMCYYLTDIRY
                     LVLIFLLVLWESLADFQHQTFTFTLAFCLLIGLVSQLMFKKEAFGSGDMLLLVALSPL
                     FRLEKMLLLILTASLLGIGYYLAYWLMKKQKLAKLAFIPFISTAMLLVLMLESRGINY
                     "
     gene            complement(45591..46787)
                     /locus_tag="PXD69_000047"
     CDS             complement(45591..46787)
                     /locus_tag="PXD69_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDL6282301.1"
                     /translation="MTKIYEFHWQAQSRFGQKQRGKRLATNRDMLENLLLAQGYQHIR
                     ISRNFVLSANPKKEEVNSLLSQLALLVNSAMPLKQALSMLLQNCRNIRLYLWLNELIQ
                     HIESGYAFSQSLEKLGEFVTNQEIQLIKMGEQSGKLGIMLTNLAESRAKLEKLAKKVK
                     KILFYPVIVLLISLALSIGLLVLIVPQFAQLYGSKDKTLPLITDILFTLSECLIEQGT
                     VLLGTLLLAVIFYLFFAKKSRLVAKWKMALWAKMPLFSRIIEQSRIIFFSQNIALMLN
                     AHIPLDVALRSFLSEKNDDPILQQEIGTMLNLLQQGYKFSQGINPNVFGAEMAQMLEV
                     GEKSGNVAKMCEHISEMYQQKLDYQIDILSQLLEPMLMLIMGVIVGTIIVGLYLPIFD
                     MGALVE"
     gene            complement(46784..47236)
                     /locus_tag="PXD69_000048"
     CDS             complement(46784..47236)
                     /locus_tag="PXD69_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilB"
                     /protein_id="HDL6282302.1"
                     /translation="MEYSVTDLNSQRFIEISAEQWQKNCNEKQILLRYLAIPLQETEE
                     QLWLGIDDMQNLNACEIFAFIYHKQIEPVLISSDELKFLLNALSPEQSSRQSEIYEEN
                     TAYSLAHSEQVDRNDPIIQILENLFKFCLQHNASDIHFEPQKEKLLRQ"
     gene            complement(47257..47736)
                     /gene="ppdD"
                     /locus_tag="PXD69_000049"
     CDS             complement(47257..47736)
                     /gene="ppdD"
                     /locus_tag="PXD69_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HDL6282303.1"
                     /translation="MQKIVHFRPLGIRQLHRAFTLIELMIVIAIIAILATIAIPSYNS
                     YTQKAALSELLQASASYKSDVEVCIYNSGGLDNCSGGTNGIQANKTSSNTTKYLNSIA
                     VTKGVITVTGKGSLNGYGYTLTPSFSNNTISWTASCSGNDTSLFPANFCSTTVTPNG"
     gene            47917..49296
                     /gene="radA"
                     /locus_tag="PXD69_000050"
     CDS             47917..49296
                     /gene="radA"
                     /locus_tag="PXD69_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDL6282304.1"
                     /translation="MAKAPKTAYVCNDCGAEYSRWMGQCKECKAWNTISEVRLISSKE
                     AAKSDRFSGYAGETSGKVQTLSDISLQEVPRFSSGFNELDRVLGGGVVPGSAILIGGH
                     PGAGKSTLLLQVMCGLAQHLPTLYVTGEESLQQVAMRANHLGLPTANLKMLSETSVEH
                     ICNIADQEKPKIMVIDSIQVMHLSDIQSSPGSVSQVRECASFLTRYAKTRQVAIIMVG
                     HVTKDGTLAGPKVLEHAIDASLLLEGESDSRFRTLRSQKNRFGAVNELGVFAMTEQGL
                     KEVKNPSAIFLSRSEEQTPGSSVMVLWEGTRPLLVEIQALVDHSMLANPRRVAVGLDH
                     NRLSLLLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSADLALILALISSFRNRPLPQD
                     LVIFGEVGLAGEIRPVTSGQERISEAAKHGFKRAIIPHGNVPKKAIKDMQVFTVKKLS
                     DALDILYNL"
     gene            complement(49351..49581)
                     /locus_tag="PXD69_000051"
     CDS             complement(49351..49581)
                     /locus_tag="PXD69_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HDL6282305.1"
                     /translation="MDYVEILGYVAMILVACSFLLKDVIKLRVVNSLGCACFVVYGLL
                     IGSIPVTGLNALVVCINLYYISKGNRPTAAHS"
     gene            complement(49701..50195)
                     /gene="folA"
                     /locus_tag="PXD69_000052"
     CDS             complement(49701..50195)
                     /gene="folA"
                     /locus_tag="PXD69_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HDL6282306.1"
                     /translation="MKISIIVARTINKVIGKDNQMPWHLPVDLAWFRQNTLGKPVIMG
                     RKTYESIGRLLPKRPNIILSRSGFTVEGAYAVQSLEQAVELAKNFANTAEIMIIGGGE
                     LFKQALPLAERLYLTEIQADIEGDTFFEFDEQNWALVEEKWSEIDENNPFRCRFMCLE
                     RKSV"
     gene            50271..50426
                     /locus_tag="PXD69_000053"
     CDS             50271..50426
                     /locus_tag="PXD69_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl kinase"
                     /protein_id="HDL6282307.1"
                     /translation="MATLFLVTSEQIMSKTIVIKFGTSTLTHGTKSLSRPYMLELVKL
                     NYTNSIV"
     gene            50423..51391
                     /gene="proB"
                     /locus_tag="PXD69_000054"
     CDS             50423..51391
                     /gene="proB"
                     /locus_tag="PXD69_000054"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL6282308.1"
                     /translation="MIVVTSGAAAAGRDYLGHPELPKTLASKQMLAAVGQSQLIRVWE
                     NLFDIYNIHIGQMLLTRADLDDRERFLNARDTLDALLAQKIIPVINENDAVATEEFKV
                     GDNDNLSALVAILAQADQLYLLTDQEGLFSADPRSNPDAKLLSVVEKITPEIRQIAGG
                     SSTGLGTGGMSTKITAADIATRSGVETIIASGSRPNVLVDLANGQNIGSKFLVQSDRL
                     EGRKRWLFAAPQVGEIVVDFGAEQALLQHKSLLPVGVSAIKGEFTRGEVIKIFSQDGK
                     ALALGIARYSSEALLRIKGKKSKEIESLLGYEFGSVAVHSDEMVVY"
     gene            51391..52155
                     /locus_tag="PXD69_000055"
     CDS             51391..52155
                     /locus_tag="PXD69_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDL6282309.1"
                     /translation="MELGIDVLAILFAVATLAGFIDAIAGGGGLLTIPALMAAGLPPA
                     MALGTNKLQACGGSLSSSLYFIRKKAVNLKQIWLLILCTFLGSAAGTIFVQMINVDFL
                     KTLLPFLILIIGIYFLVSPKIGDEDRKQRISFTLFAFTAAVALGFYDGMFGPATGSFM
                     TLAFILLLGFNLSKAVAHAKVINFTSNFASLIFFTLGGAVMWKIGLIMMVGQFIGGTL
                     GAKMVMTKGKKLIRPMLVTMSFMMVGKMLYEQGIFN"
     gene            52158..52790
                     /gene="nth"
                     /locus_tag="PXD69_000056"
     CDS             52158..52790
                     /gene="nth"
                     /locus_tag="PXD69_000056"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDL6282310.1"
                     /translation="MNKAKRIEILTRLRNENPKPTTELNYSNPFELLIAVILSAQATD
                     KGVNKATDKLFPVANTPQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNG
                     EVPEDRDALEALAGVGRKTANVVMNTAFGHPTIAVDTHIFRVSNRTNFAPGKNVVQVE
                     EKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEFKEKTE"
     gene            52987..54237
                     /locus_tag="PXD69_000057"
     CDS             52987..54237
                     /locus_tag="PXD69_000057"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HDL6282311.1"
                     /translation="MDIYLVGGAVRDQLLGLPVKDRDFLVVGATAEQLLAQGFQQVGA
                     DFPVFLHPETKEEYALARQERKNGNGYNGFICDFSPNVTLEQDLIRRDLTINAIAQDE
                     NSTLFDPYGGVQDLENRLLRHVSPAFSEDPLRVLRVARFAARFHSFGFTIAPETLKLM
                     REMVQSGELKHLTAERVWLETQKAFETDNPHVYFDILRLIGALKVLFPELDRLFGVPQ
                     PPQHHPEIDSGKHTLMVLQQAKRLAKKAENPTALLFAALCHDLGKGLTPADILPHHYG
                     HEVKGIQPTRELANRLKIPTEIKDFALLVTEYHTHCHKMAELRPETVIKLFNSLDVWR
                     KPNRFFDFLFACEADARGRLGFEQRNYPQPELAKKYYQAAIEIDVQQVIQDGFEKQAI
                     REELNKRRVYAVRSIKLDSDLINH"
     gene            complement(54338..55273)
                     /locus_tag="PXD69_000058"
     CDS             complement(54338..55273)
                     /locus_tag="PXD69_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDL6282312.1"
                     /translation="MSESKPFPITTGFFAMPLGLGALGLAWLNATPITPYATTIGNII
                     AGTSVILWVALLGCYVYRVFFCFEQIKAEFMHPVQCCLFSLVTMTTMISGDVLYVWDF
                     YLGELLIFLGVIVHLIFLVFIIGGLWKGTQFLPETLHPVHYLPPIAGSFTMASSLSLI
                     GYSEIASLFLGIGIISWLVYEPTMLQRIRLSPLFPIARPSLGIVLAPAFVGASAYFSM
                     GGELDLLAKMLWGYGFLQFCFILRNLKWIAENGFSMGFWAFSFGLAAMARGAIEFYQF
                     EPLSFIGLAGFTIANFGIGLLLIFTLKLWLQQSRA"
     gene            complement(55402..55596)
                     /gene="iscX"
                     /locus_tag="PXD69_000059"
     CDS             complement(55402..55596)
                     /gene="iscX"
                     /locus_tag="PXD69_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HDL6282313.1"
                     /translation="MKWTDTRMIAENLYDMNPDLDPTTVRFTDMHKWICEMEDFDDDP
                     EASNEHILEAILTIWLEEYE"
     gene            complement(55596..55937)
                     /gene="fdx"
                     /locus_tag="PXD69_000060"
     CDS             complement(55596..55937)
                     /gene="fdx"
                     /locus_tag="PXD69_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HDL6282314.1"
                     /translation="MPKIVFLPHEEFCPEGMVVEAKAGDNLLEVAHEAGVEIHHACDC
                     SCACTTCHVVIREGFDSLNDTSDQEEDMLDKAWGLEIDSRLSCQCIVGEEDLVVEIPK
                     YNLNHANEAAH"
     gene            complement(55956..56321)
                     /locus_tag="PXD69_000061"
     CDS             complement(55956..56321)
                     /locus_tag="PXD69_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 51 family protein"
                     /protein_id="HDL6282315.1"
                     /translation="MSNYVKTEISEQFRTVAVEFDLEDNRIFELGERINTEYDVAYMN
                     GYNWAAFLRAYLSIYRPSLLELLEEDPDVGCYYVTYPLSEKSKEKARELKKIIVYLVE
                     NEEEILNFIGEHLDNIEWD"
     gene            complement(56331..58184)
                     /gene="hscA"
                     /locus_tag="PXD69_000062"
     CDS             complement(56331..58184)
                     /gene="hscA"
                     /locus_tag="PXD69_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HDL6282316.1"
                     /translation="MALLQISEPGQTAAPHQHKLAVGIDLGTTNSLVATVRSGQTQVL
                     LDEQERALVPSVVHYAETEKTVGIEAFAKAALDPKNTVISAKRLIGRSLADVQQRYQN
                     LPYQFVASENGLPLIQTAQGNKSPIEVSADILSHLAQFAEKRLAGELSGVVITVPAYF
                     DDAQRQSTKDAARLAGLNVLRLLNEPTAAAIAYGLESGQEGVIAVYDLGGGTFDLSIL
                     RLRKGVFEVLATAGDTALGGDDFDHLLAEWIAEQANYKPQTASEQRELLTLATQTKVA
                     LSQAVEFEVKFANWTGVVSRSQFNELIQPLVKRSLMTCRRALKDAGVEAEEVREVVMV
                     GGSTRVPFVREQVGEFFGKTPLTSIDPDKVVAIGAAVQADILVGNKPDSDMLLLDVVP
                     LSLGIETMGGLVEKIIPRNTTIPVARAQEFTTGKDGQTAMTIHVLQGERELVEDCRSL
                     GKITLRGIPAMAAGVAQVRVTYQVDADGLLNVTAMEKSTKVQASIQIKPSYGLTDEEV
                     TQMIKSSMANAKEDMEARQLVEQRVEADRVIDSVVTALKEDGSAVLSVEEFQAIEAQL
                     ARLIELKEGTDRFAIQQGIKEVDLATQEFAARRMNLSIQKALAGKKMDDLA"
BASE COUNT        17697 a        12385 c        11591 g        16590 t
ORIGIN      
        1 tcttactaaa ttgtatattt aatatccgaa ttagcttctt ttcccgctaa tttatctaac
       61 attgactgtg tcactaatac aatgccattt ttgctgacac gaaaacgttt cgcatcttct
      121 tcggcattta caccaatttc taagccatca ggaattacac aatgtctgtc aatcacagcg
      181 cgcttaatta cgcaattttt accgatagtc acctgcggta aaatcactgt gtgttcaatc
      241 accgactccg cttcaacgtg aacacggtta aataagaccg aattactgat ttccgcatcg
      301 gtaatcacac aaccacccgc aatcagtgag ttatctaggg ttctggcacg cgcacgatta
      361 tagaaaaaac gtgccggtgc agtttgttgc ggacgaccgt gaatcggcca agattcatca
      421 tataaatcta attccggatc ttcagaaact aaatccatat gggcagccca gtagctgtca
      481 atcgtaccga catctcgcca gtaaattgcc ccactggcat tacgcccttt acaagaacgt
      541 tcaaatgggt gggcatatag cacaccttgc tctactgctt ttggaataat atctttaccg
      601 aaatcatgtg aggttcccgg tgtagaggct tctttttcca gcatttcata tagataatct
      661 gcattaaata cataaatccc cattgatgct agcgaggaat ccggttttcc cggcattgca
      721 ggtggatcag ctggtttttc gacgaactct ttcactttca gcttttcatt caccgccatt
      781 accccaaact ctgttgcttg cgagcgaggc acttcgatac aacctacagt acattttgca
      841 ccttgatcga cgtgatcttt cagcatttga gtgtagtcca ttttatagat atgatcccct
      901 gctaaaatca ccacatattt tggtctatag tgcgatttca tcatcgccat attttgatac
      961 accgcatccg ctgtgccacg ataccaagtg ttttcatcta gctgttggcg tgccggtaac
     1021 atatcaatat attggttacg ttcataaggt aaaaatgacc aaccacgttg taaatggcgc
     1081 aacaaagagt gtgctgcata ttgggtaatc accccgattt ttaataaatt cgagttaata
     1141 caatttgata acgcaaaatc aataatacgg cggctaccac cgaaatagac tgccggtttt
     1201 gcacgtttat cggttaattc gtataggcga gaacctcgtc ctcctgcaag aattaatact
     1261 aaggtatcgt tggttaaatc ttgtcttgca acaagagccg ttgattcttg gttaagcata
     1321 ttgtgtctcc aatttattag cgaacattac atcacttttt tgaagtacgc atacacccat
     1381 attattgagc gtaaccgctt gcgtgtctgt catcaaaata ccttgagcct gctccaacac
     1441 aactttccag ttgccttgtg gcagtaaaaa cggttgaggt tgtcgattag cattgaataa
     1501 aagcagccat tcttcctgta ataaaacgac aagcccatta tgttgattat gccaatcgtc
     1561 aatattcatt agctgagcag aaggattcaa ccattgtacc gaatcctctt gccaccaatt
     1621 attctgcttg gaaagcaaag cgattttttt acgcaaccgg attaaactac gaacataatc
     1681 cagccgtgtg tgattcatat tttcccaatc tagccaagtg atctcattat cttggcaata
     1741 actattattg ttaccttgtt gactatgtcc gatttcatca ccggctaaaa gcattggaac
     1801 accagccgat aaaaagagcg tagcaagcaa actacaagcg gtgatttctc tctgtttttt
     1861 taccaattca tctgctgtct gcccttcaac accgtggtta ttgctgtagt tactattatg
     1921 cccgtctcgg ttttgttcac catttgccca attatgtttt tgctgatagc tggtgagatc
     1981 ttgtaacgta aacccatcgt gtgccgtaat aaaattgata ctttttgaaa cggaatattt
     2041 agtaaacaca tcatcacttc ctgccaatcg ccgtgccaaa agcccccaat caccttggtt
     2101 ttgtaaccaa aaacggcgta tatcatcacg ataacaatca ttccactgat aaaaaggctc
     2161 agggaattgc cctaattgat aaccttctac accaatatcc caaggctcag caatcaactt
     2221 aatatgtgtt aatttagaat ggcttttaag tgctgtgaaa aaatctgctt tttcagaaaa
     2281 actcggtgtt ctacctagaa ttgaggcaag atcaaagcgg aatccatcaa tatggcactc
     2341 ctccacccaa tagattaagc aatcgattgc ccagcagagt atataaggat tgctcaaatt
     2401 taaggtatta ccacagccag tccaattttc gtattcgccc tgtttatcta gccaataagc
     2461 tgtattgtca atgcctctaa aacttagcat cggcccgttt ttatcactct cagctgtgtg
     2521 gttaaacaca atatccataa tcacttcgat atgtgcttga tgtaatgttt ttacgagctg
     2581 tttaaactct ttaagaggat tttgcttatc tgctgctaaa ttcggatcaa tagcaaaatt
     2641 acctaataca ttatagcccc aataattcac aagcccttgt ttctgcaaat gggtttcatc
     2701 aatatggtaa gtaacgggta gaagttctac tgcggtgatt cctaaggttt ttaaatagtc
     2761 tatcgaaaca gggtgagcca aaccggcaaa agtgcctcga atgtcgcttg gaatctgaaa
     2821 gttccgctga ctaaaacctt tcacctgcat ttcataaata atagtctctg cccaaggagt
     2881 gaataactgg ctatcatttt cccaatcaaa atgctcatca atcacgatag acttaggtgc
     2941 aagagaggca ttatcccgtt catcgttcca tttataccaa gcggctgcct ctgcactact
     3001 taaatccggc ttcccttcaa tcgctttagc gtaaggatca gtcaataatt tttgcggatt
     3061 aaataacaaa ccggcttgtt catcttgtat gcctttcacc ctgtagccat attttgtccc
     3121 tgcttgtaca cctgctacaa aaatgtgcca agtatctccg gaagaaaaca tcggaatacg
     3181 ggtttcgtgg tgattttcat caaaaagaca taactcaata gcggttgcat tttgcgaaac
     3241 aatggcaaaa tttgtgccaa attcacccgc ttgtctatca agtttattgc ctaaaggaaa
     3301 aggcttacct ctaaaatagt gcatattatt ttttatgttt ctttaagtta tgttttgttt
     3361 tgttttgttt ttttgtctgc ggctcttttg aggaagatag tcgatagcgg tggcaaagta
     3421 atgctcaagg agtaggcttt accgtgcgat gcaattaact cgctggcaaa tcggtttgca
     3481 ttgctgacat tactaccgca ataacaagct aaatcagaat tgagaatttc ctgatattct
     3541 gccaattcat tcaccccaaa acggtaattt tcacgcacaa tcggggtgaa attactcacc
     3601 acaatcaccg aatcgccatt tttggcttta cgctcaaaag caaacaccga attatcgtga
     3661 tcgtccacca ctaaccactc aaaaccttca ggattgtaat cttgctcaaa cagtgcaggg
     3721 gtttgggtgt ataaatggtt aagggctttt acccaaccca atacgccctt atgccattcg
     3781 cccccttctt ccccgagtaa ataccaatct aagctctcgg caaaattcca ctctttacct
     3841 tgagcaaact cgttgcccat aaagagcaat tttttgcccg gatagcccca catatagcca
     3901 taataggctc gtaagttcgc aaatttttgc cagcaatccc ccggcatttt attcagcaat
     3961 gaacctttgc cgtgaacaac ttcatcgtgt gaaagcggta acacaaactg ttcgctgtat
     4021 tggtaggtca taccaaaagt cattaaattg tggtgataac ggcggtaaat tggatctttt
     4081 tgcatatagc gtaaagtgtc gttcatccag cccatattcc atttataatt aaagcccaaa
     4141 ccgcctcttt cagttgagtg agacactccg gcaaaagaag tggactcctc tgcaatgctc
     4201 gcaccgcctt ggctttcgtc tctcaaaata ttattggtgt ggcgtaagaa gtcgattgcc
     4261 tctaagttct cacgtccgcc atatttattt ggaatccact cgccgtctga acgtgagtaa
     4321 tcacgataaa tcattgacgc caccgcatcc acccgcaacg catcaatccc aaaacgctca
     4381 atccaataaa gtgcattacc agacaaataa ttgctcacct catttctgcc gtagctaaaa
     4441 attaaggtat tccaatcttt gtggtagccc tctttcggat cggaatgttc gtataaatgc
     4501 gttccatcaa aataaaccaa gccgtgttca tctaccggaa aatgccccac tacccagtca
     4561 agaatcacac caatgccttt atcgtgagct ttttggataa agtaactcaa gccctcaggc
     4621 gtaccaaaac ggctggttgg cgaataaata ccggtggttt gataacccca agagccatca
     4681 aacggaaatt cggaaatagg cagcaattca atatgggtaa agcccatatc tttcacataa
     4741 ggaatgagtt catcggcaag ctcttcatag ctaagccaat aattgttttc aatgttgcgt
     4801 cgccaagagc ctaaatgcac ttcataaatg gaaatcggtt tatcgggagc attcgcatta
     4861 cggcaggttt tctcggctgg cacaatgctt ggcaagccgg aaacaataga tgcggtttct
     4921 gggcggaatt gggaggcaaa ggcgtaaggg tcggatttca accgtagcac gccgtttcga
     4981 tccaacactt caaatttata gcactcccct tttttcacat tcggcaggaa aatatcccaa
     5041 ataccggaat cggggtggaa tcgcattgaa tgtaccaagc cgttccagtg gttgaaatcc
     5101 ccaaccacgg aaacccgctg agcgttcggc gcccagacgc taaaatgcac acccccaact
     5161 tcattttgtg tgactaaatg tgcgcctaat ttttcgtacg ggcgaagttg ttttccttcc
     5221 gcaaacaacc aattatcaag ctcttgaata tgggttttaa aacggtaagg gtcttctata
     5281 tccaccgttg aatcagggta ttccaccaac aagcggtaag aaaaatctgt ttttttacca
     5341 atcagctctg caataaaaaa gcctctatca tcaattttta gcattgatga cacaggcttt
     5401 ccgtttaaat cgatcacttg gcaagctatg gcagaaggaa gaaataccct aataataacg
     5461 ccgttattgc tagggtgaat acctaggtag gagaaaggat cattacaaga acccgaagaa
     5521 agtcgctcaa caaaaaaagc atctttttca gaataagtat agtcttgcat cggcactcct
     5581 tgcttaaagc gtttaatact taaatttcaa tagttctcac tctatcacta aatagaaata
     5641 aaagaagtgg atttacgcca ttttttgagc taaatcacaa aataaaatcg ttttaatctt
     5701 tagtttaaat catcaaacct taaattttgt gacatagatc acattttgaa acatttttat
     5761 ggatattttt agttggctat aacggtttag caaaatatag agtaaactaa ccataacatt
     5821 acagtttaaa aatcaacttt aaatccaagg agctaaaatg cttaatttat cggcaaaaaa
     5881 catccgttta aatggttcag caagcaacaa agaagaagtt atccgttttg ttgccgccga
     5941 attagtcgcc aagggcaatg tagcagccgg ctatgaagtc ggtatgctta atcgtgaaac
     6001 ccaaacctct acttttttag gtaacggaat tgctattccc cacggcacgc ttgatacccg
     6061 tgatttagtc aaagaaaccg gcgtgcaaat tatccaactt ccgcaaggcg tggaatgggg
     6121 cgaaggcaac actgcttatg tagttatcgg gattgcggct aaatcggacg aacacttaac
     6181 cttactccgt caactcacca ctgtattaag tgatgaagag gctgctgcca cattagcgaa
     6241 aacgcaaaat ttagatgaat ttattgccgt attaagcggt aagaaaaacc ttcctgcctt
     6301 atctcaagag ctgatttctc tgaatatcga atcttcaagc cctatcactt tatcagccat
     6361 taacgccgca aaactacaag agcaaggcta tgtttcccaa gcattcatca gcgatgtggt
     6421 tgccaacaaa gcgttacatt taggcaataa tctatttgtg gtggattccg ccaaaggcaa
     6481 ccaagctaac ggtatcgcta ttgcccgtaa tacgcaaggt caaaccctac taactgtggc
     6541 agaaaccgac aatgctctac agccactatt aactcaatta ttaaaaccag aagtaagaag
     6601 ccagtttgct catttctctg cggagcaaat gcttggttta ttaaaaggcg aaagcgtagc
     6661 ttcaacccct gtaaccaatg tcgaagcgag tggcaaccaa gtggttggca cattcaccat
     6721 tcgtaacgac aacggcttac acgcccgccc ggctgcggtg ttagtacaaa cggtgaaacc
     6781 gttctcctca aaaatcagcg ttgaaaattt agaccgcaac actgcaccgg caagtgcgaa
     6841 aagtgcaatg aaagtagtag cactaggggc aagccaaggg catcgtttac gctttgtggc
     6901 agagggagaa gacgcccaac aagcgattga ggcattacaa caagcaatta ttaacggctt
     6961 aggcgaaagt gtttcattcg taccggcggt ggcagatacg attgaaagca ttgctgtttc
     7021 agcaattcct gcggaagaaa ctgcgactgc tgtcgatgcc aatacgaaag aagcaacttt
     7081 tgtaattaaa aacgaacacg gtttacacgc tcgcccaagt gcggtgttgg tgaatgaagt
     7141 gaaaaaattc aacgccaaaa ttgaagtgca aaatgttgat aaaaattcac cgcttgtaag
     7201 tgccaaaagc ttaatgaaaa ttgttgccct tggcgtaacc aaaggcacga cgctacgctt
     7261 tgtggcaagc ggtgatgatg ccgaagtagc acttgcggca atcggtgctg cgattgaagc
     7321 aggtttaggc gaataagcga ggaatcatta tgcgtattgc aaccgttacc ctcaaccctg
     7381 cctttgattt agtcggcaaa cttcaacgta ttgaaatcgg cgaagtgaac accgtagaaa
     7441 cccttggttt ataccctgcc ggcaaaggta ttaacgttgc taaagtttta gctgacttag
     7501 gcacaaaact ttcggttacc ggctttttag gcgaagaaaa tcaaggcgat ttcgtaaatg
     7561 cctttaaaca caatgatttg gctgatgaat tttaccgtat taacggtaaa acccgcatta
     7621 atgtcaaaat cactgaaacc gaggctgatg taactgatct gaactttctc ggctttgaaa
     7681 tttcggaaag cgattgggaa aaattcgtca cattatctca tcagtgggaa agcaaatttg
     7741 acttagttgc agtgtgtgga tctctccctc gtggcgtaac gccggaaaaa tttgcttctt
     7801 ggttggaatc tttacaccgc caaggcttaa aagtggtgtt agataccagc aatgcggctc
     7861 tcaccgccgg cttaaccgct cacccttggt tagtaaaacc aaaccgccga gagctggaag
     7921 tgctggtcgg gcattcactc aactcaatcg aagagattat tagtgcagct aaacaattac
     7981 gttcccgtgg tattgaaaat gtaattatat caatgggcga acaaggctct ctttggctaa
     8041 atcacgaagg cgtgttacaa gcccgcccac cacgttgcga aaatgtagtt agcactgtag
     8101 gtgctggtga ttcaatggtt gccagcttga tctacggctt atctcaaggt tggagcaaag
     8161 agcagacctt gcgttttgcc tcagctactt ctgctctagc tgttgttcaa agtaacgttg
     8221 ggattgcaga ccgtgcggcg ttagacgata ttattaaaca aaccgacatt accgtgattt
     8281 cagaaaatca ttaaacctca atcaaaggaa caaaccaata tgaatatttc ttttgtattt
     8341 cctcaaacac taggcaacgc acgccgtttc ttagtgaatg aaatgttatc tgccgctgcc
     8401 aagcaacaag gacacaatgt tgtggcggca aaccaagctg attttgtggt gttattcgat
     8461 aacgcaattc cacaagaagc tgccggcaag caaggggcaa ttttggactt agaacaagcc
     8521 tttgctcaac ctgaagccag tctcaaacaa gcggtcgaaa atgcacaaac ttttgcaaat
     8581 gctaccgcaa ccactgcggt ttcagcggtt tcatctggtg tgaaaaatat cgttgctgtt
     8641 accgcttgcc caactggcgt ggctcatact tttatgtctg cggaagcaat cgaaaattat
     8701 gccaaagcac agggttggaa catcaaggtt gaaacccgtg gtcaagtagg agcaggaaat
     8761 ccaatttccg ccgaagaagt cgcagcggca gatttagtct ttgtagctgc cgatattgat
     8821 gtcgatttgg aaaaattcaa aggcaagccg atgtatcgca cctcaaccgg tttagcattg
     8881 aagaaaacca ctcaagaatt tgaaaaagcc tttgctcaag cgaaaattta cgaaggtggt
     8941 gtggcaaaag cggataatgc tgaagctcca acttctgaga aaaaagggtt atataaacac
     9001 ttgatgaccg gtgtatcaca tatgttaccg ctggtggtag caggtggctt gctcatcgct
     9061 atttccttta tgttcggaat tgaagccttt aaagatgaaa ccatcgcagg cggcttgccg
     9121 aaagccttaa tggatattgg tggcggtgcg gcattccact taatgattgc ggtattcgca
     9181 ggctatgtag cgttctcaat tgcagaccgt ccggggttag ctgtcggtct tatcggcggt
     9241 atgcttgcta ccaccgcagg agcagggatt ttaggtggta tcgtagccgg tttcttagcc
     9301 ggttataccg taaaattctt aaatggtgcg attcagctac cggcaagttt aacctcactt
     9361 aaacctattt tgattttacc actcttaggc tcagcgattg tcggcttact gatgatttat
     9421 gtcatcaacc caccggtgaa agcattaatg gatgccttag tggaatggtt aaacacaatg
     9481 gggcaaacca atgcaattat tttaggtatt attctcggtg cgatgatgtg taccgatatg
     9541 ggtggtccgg tgaataaagc ggcttatacc tttggtgtgg gtttaattgc ttcacaacaa
     9601 tatatgccaa tggcagcggt gatggcggca ggtatggttc caccaattgg tatggcgatt
     9661 gcgaccctga ttgctcgtag caaattcaac accaaccaac gtgatgcagg taaagcttca
     9721 ttcgtgttag gtttatgctt tatttcagaa ggggcattac cgttcgtggc ggcagaccct
     9781 gtgcgtgtaa ttgccagctc aatcttaggc ggtgcaaccg ccggtgcaat ttcaatggca
     9841 ctaggcatta ccctacaagc cccacacggc ggtttattcg tgattccatt cgtttcacaa
     9901 ccgttaatgt acttagctgc tattgccatc ggctcattag tcaccggcgt agtctatgcc
     9961 gctatcaaac aaaaagcaga ataaagcaca aacacaaata caaacaaaaa cggagcgaaa
    10021 cgctccgttt ttatatcata ttggtactta ctgaattcta tttcatcgaa atatcaagtc
    10081 taaaatatta tttttgcgat cgagatcgaa aaaatcattt tcatcacttt acgaataata
    10141 tcaactcgtt atgattttgc tacgaggaga tactatgcag tttattgaat ttaccgatcc
    10201 tgatagtgga atttcttatc aatacagtga atttactatt gctaatgtcg catttatcat
    10261 taatttctgc tcagatgccg atgttatatc gactttgtcc gcattaggca aagatatcac
    10321 aaactatata aacacctatt cctgttgcac aatcaaattt atggcgaaag agcatctaga
    10381 aaatagcggt tctaatattg acatttatgc ccccgcagcg aatcatcagt tcaaacgtaa
    10441 agaaataatt gctttacaag aaacccttga gcgtttatta tttgagcatt atgtacgttt
    10501 tacaccagaa agctatctct tcattgccga gagagattca cttaaccgaa tgtatcagcg
    10561 tatgtgtgtg ccacgatgtg attttatgca atctttccaa gtggtttatc ccttgggcgt
    10621 taatcaagat tgtttcattt taattacgcc aaaaggaaat ctaaaatgaa tcaacaacgt
    10681 ccagtttccg ttcgtttaaa gcaagaaggc ttaatcgctt ttaagcaagc ctatcagcga
    10741 gcaaaaaaag caggtctatt gaaaccggtc aaataatctt taaaccgctt gctctacaag
    10801 cgatttattt ttccttaatt atcacacctt gctacgaaaa ctatcccaac tcaataatcc
    10861 aatcgaaacc agcaaacaga ccatcaaaat ataggaattg gcatcgagtt tttcgccgat
    10921 ggcaaaagaa atcagcaaca tcaccaacgg ttcaacatag cccagtaaac ctaatacatt
    10981 aatcggtaat aaattgctcg agaggatata aagaataaaa gcactgccac ttaccagccc
    11041 cagcaatccg aggtagaaat aaatttgcgg attttctgcc actattggcg tcatttccac
    11101 ttggctgaga taataaagtg caacgggtaa taccagtaac aactccacaa aaaaagtagc
    11161 taacgtgttg atttgaaaat aacggcgaag ggtaatataa agcggataac ccaacccagc
    11221 tacccaagtc gcccacgaaa tcgtgctgtt aaaaaacaaa ctactgccaa caccgatgac
    11281 tgcgaaaagt agagaaagcc atttcaggcg ggtaaaatgt tctttaaaca ccatttttcc
    11341 tagagccacc gccacaatcg gtaaaagcaa gtaaccaaac gacacctgca acgcctgccc
    11401 gtgattagga gcccataaaa acagccaaag ctgcacgccg gtgttgagag caaggagcaa
    11461 aatgaccaat acaagcggtg gattttgtcg aattttttgc aaaagatccg caaaagccga
    11521 ttgctgttta aacaatataa tcgccagcaa aataaacgga atgactacca ctatccgaaa
    11581 gccgaacatc gcctctccct ctaacgggcg aagcaatatc gcaaaatagt aaactgctcc
    11641 aaacagcaca ttggctgcaa gcgaagctaa aattcctttg agcatttggc tttcctctta
    11701 tcaacaatca aacaacaagc ggttgacttt gaacaaaaat ttacaaatct tatctacgcc
    11761 ccatagtatg aaaaaatttg taagtaagct agctatattc gatttttccc gatacaatgc
    11821 tcccaatttt tcactctttt atttatatta taggacttca taatgaaaaa gattttttgg
    11881 attttactga tcgccatgct tgctgttggc ggttattctt taacaaaata caacgattta
    11941 atgcgtgcag aagaagacat caactccgta tggggaaatg ttgaatcggc ttaccaacgc
    12001 cgtgcggatt taattccaaa cttagtgaat accgtaaaag gtcaggctaa ctttgagaaa
    12061 gaaactttaa cctctgtgat tgaagctcgt gcaaaagcaa ctgcggtaac cattgaccca
    12121 agcaatgcaa ctgaagagca aatggctaaa ttccaagaag cccaacaagg tgtaaactct
    12181 gctctttcac gcttattggt ttcagttgag aaataccctg aattaaaagc ccacgaagcg
    12241 tttttaaatc tacaagctca attagaaggt acggaaaacc gcattaacgt tgaacgcaat
    12301 aactttaacg aaaaagtgaa agagtacaac aagcaagtgc gtgaattccc gactaaatta
    12361 gcggcaatga ttatgggctt taaagcaaaa ccgcaattta aatctgaagc aggttctgat
    12421 aaagcaccaa ccgtaaactt caactaattt tagtttcaat ttattcatat taaaagcaat
    12481 aagctctttc aaatccggtg cttattgctt tatttttaag gggaacaaat gggattattt
    12541 tcttttctct ccaacaaatt accgatagat acgcaacgca ttgaacaagc aattgccgat
    12601 ttagagcaaa aaacctctgc cgaattgcgt gtggtggtgg aacgaaaagc caaaatcggc
    12661 aaaaccgaca acgccgctat gttgcgagca agtgagcttt tcgatgaatt aaaaatgcgt
    12721 gaaacggctg aacataacgg tgtgttgatc tacctttcat tcaagcctca ctacgctgcg
    12781 attattggcg atgaaggcat tcatcaaaaa gtcgataacg atttttggca aaaaatctat
    12841 gccacaatgt gtttggactg ccaacaaggc gattacaccc aagccatttg tgatgcaatc
    12901 aaaatggtgg aagctccgct cgctcaccat ttcccttatc aggctgatga taaaaacgag
    12961 ctttcaaacg aggtggtagt caaatgatga aatccctttg caaatttcta tctattttca
    13021 accgcttgtt attggtgtgc ttggctctgt ttagcctaaa tgccacagcg gtgacctacc
    13081 cagagccgcc taatccgttt tattatatta cggactacac caaaaacacc ttgagccaac
    13141 aagaatggcg gacattagaa gatgccttaa ttgctaactg tgccaagaca agttcgcaaa
    13201 ttgccgtggt gattattcca agcacggaag gcgaggcagt ttcaacctat gctcataccc
    13261 tgtttaacaa atggggaatc ggacggagca aaaataacga gaacaatggt atattgttat
    13321 taattgccaa aaatgatcgc aaactcttta ttgccaccgg acgtgggctt gaaggagcgt
    13381 tacctgatgc gattgcatcg agcattatcc gcaatgacat cacgccattc ttcaaacaag
    13441 agcaatatgc agccggtatc gcccatggct tatccgccat tatggcagcc attaacgggg
    13501 aatatgcccc ttatgcaagt tatggcgaag aaatgcaaga atttgatgac atagacggct
    13561 tactcttttt cttgtttgcc ggcattgtga ttttcctaat tttccgccca cgaggaaaca
    13621 gtacctatat tagtcccagc tcaatggatc aactaggaca aatactaaga gaaagccaac
    13681 gcagaggtgg gggctttggc ggtggtctcg gaggtggctt tgatcgaggc tcaggtggat
    13741 ttggcggagg cttcggtggt ggttttggcg gaagcagagg cagtggcgac agcttcggtg
    13801 gtggttcatc aggcggtgga ggcgctggag gaagctggta gtttccgccc aatttaaaac
    13861 aatacaagcg gtcatatttc tcaaaaaaat tgcgtatttt tcgctaaacg cacaaaacgc
    13921 taatgaaaat aagaccgctt cctcacttct ctaagctatg ccctttttag taacaatgct
    13981 acggcttcac aagctatgcc ttcacctcgc ccggtaaacc ctaatttttc tgttgtagtg
    14041 gcttttacat tcacttgtga tatatcgcat tgtagatcgt ctgcgatcac ctgtctcatt
    14101 ttatcaatat gcggtcgcat cttcggagct tgagcaataa tggttacatc gacgttaccg
    14161 acttgatagc cctgttcttg cacttgtcgg taagcttcaa tcaacaaacc acgactatcg
    14221 gcatttttgt attgcatatc agtatcaggg aataatttgc caatatcacc taaagctgct
    14281 gcgccaagca acgcatctgt taaagcgtgc agcgctacat ctccgtcact atgcgcaatg
    14341 aagcctgtat gataaggcac ttcaacccca gcaatcatca gtggtctatc ttcgccaaaa
    14401 gcgtgaacat caaaaccgtg tccaatacgt atcattttag ttctccaaat tatgtgtaag
    14461 gtaaaattcc gctaaggcta aatcttcagg gcgagtgatt ttgatattat cacttctacc
    14521 tgaaaccaat tgtggctggt agcctgcaag ctccattgca gatgcttcgt ctgttacctg
    14581 aagcttattg gcaaaagcag aggataatgc ttgttttaat gcttgagcag gaaaaaattg
    14641 tggggttaaa gcgtgccata aggttgagcg atcttctgtg tgtgcgattt tcgtgccgtt
    14701 tgctcttttc atcgtatcta ccgctggaat ggcgagaatg ccaccttgcg gatcgttaat
    14761 ttgcaaaagt ttatctaaat ctgaccgctt gaggcaaggg cgagccgcat cgtgaactaa
    14821 tgcccaagca ttttcagtgt tgatttcctg taaggcattt agcactgaat ctgctctcgt
    14881 ttctcctcca aaaacaagtt ggatcttagg ggattttagg agttccaatg tggaataaaa
    14941 agggtctttt cttgccaccg ctacaatcac tttttcaaca tgagggtgtt caagaaaaat
    15001 agacactgta tgctctaaga tagtcttacc ctttaattgt aaatattgtt ttggtttttc
    15061 tgcttgcatc cggctaccaa ctcctgacgc cggaattact gcaataattt ttcgcttcat
    15121 aatatatcaa ttatgtatta tttgtttttt ggtacaattc ggtagaacat ctcgttctct
    15181 tttaccattt ctcgttcaag tcttgctctc tcttcaagtg catctacgcc gttctttaaa
    15241 tcgtaaattt cggcttcaat tagtttattg cgtgaagtaa gctttgtgtt ttctactttt
    15301 aataaagcaa tttcttcttg cacttcttga taatcactcc aaccattttt tccaaaccaa
    15361 aagctatatt ggaaaaagcc gagtaatagg gcaaaaaaag taattaataa acgcatttat
    15421 tttctcttat atgaaatagt aatgaactaa gcgggttgat tttaccttga atttgcaaaa
    15481 aattctaaaa atcttaccgc ttgttactta aacaggcgat ggatagtgct aaatgtattc
    15541 gaaaaattga tataaaacaa acaaatgcgt attttaaagc gattttttta aactaaatgt
    15601 caaaaatttg aagtatgtaa cattttttat ttttcaattt tcgtataatc aacccagttt
    15661 taaatttata actattatga ggtaaccact atgttaaatc gtattgaaca agaacttgca
    15721 gacttaggca ttacaaatgt aaaagaaatc gtgcgtaacc ctagctatga gcaactgttt
    15781 gaagaagaga tgaaatcgga tcttaaaggt tatgaaaaag gcgtcctaac aaatttaggc
    15841 gcagtagcgg tagataccgg cattttcacg gggcgttcgc cgaaagataa atatatcgta
    15901 ttagatgaaa cgacaaaaga taccgtctgg tggacatctg atgcagctaa aaatgataat
    15961 aaaccgatga ctcaatctac ttggcaaagt ttaaaaacct tagtgaccga tgagttatct
    16021 aataagcgtt tatttattat tgatgctttc tgtggtgcaa gccctgagca tcgcatcaat
    16081 gtgcgtatta ttacccaagt tgcgtggcaa gctcactttg tgaaaaatat gtttattcgt
    16141 ccaacagaag aagaattaaa agatttcaaa ccggattttg tggtaatgaa cggttcccaa
    16201 gtaactaacc cgaactggaa agagcaaggc ttaaattcag aaaactttgt ggcatttaat
    16261 atcacagaag gtgttcagat cattggcggt acttggtacg gtggtgagat gaaaaaaggt
    16321 atgttctcta tgatgaacta cttcttacca ttaaaaggtg tcgcttcaat gcactgttca
    16381 gccaatgtgg gcgaagaagg tgatgtggcg gttttctttg gtttatcagg aaccggtaaa
    16441 acgacactat caaccgatcc gaaacgcaaa ttgattggtg acgatgaaca cggttgggac
    16501 gaaaacggcg tatttaacta tgaaggtggt tgctatgcga aaaccatcaa cctttctatt
    16561 gaaaacgagc cggatattta tcgtgcaatc cgccgtgatg cgttattaga aaacgtggtt
    16621 gtgcgtgaag atggcactat tgattttgat gataaatcaa aaacagaaaa tacccgtgtg
    16681 agctatccga tttatcatat tgataatatt gccgtgccgt caaaagcagg acacgctaaa
    16741 aaagtgattt tcttaacggc agatgcattc ggcgtattgc caccggtgtc taaattaacg
    16801 cctgaacaaa ctaaatacta cttcttatca ggctttaccg caaaattagc aggtacagag
    16861 cgtggtatta ctgagccaac cccaactttc tctgcttgtt tcggtgcggc gttcttatca
    16921 ctccacccga cacaatatgc tgaagtgtta gtgaaacgta tggaagcagc cggtgcggaa
    16981 gcctatttag tgaataccgg ttggaacggc acaggtaaac gtatttcgat taaagataca
    17041 cggggtatta ttgatgccat cttagacggc tcaattgaga aagcggaaat gagtacatta
    17101 ccaatcttca atttagcaat tccaactgcg ttaccgggtg tagaaaccca cattttagac
    17161 cctcgtaaca cttatgaaga caaagcacaa tggcaagcta aagcagaaga tttagctggc
    17221 agatttgtga aaaactttga aaaatatgcg accaacgagg aaggcaaagc attaattgct
    17281 gctggtccga agttataagt tgtaattata agttataatc gctaaaaaat tagtttagga
    17341 ctaaaccttg aatgaggttt agtccttttg tataaaggag aagtacaata atgacaacat
    17401 tccaattaag gctgaaagcc aaagatgagc ttaccccaca cccaacagca caatattggc
    17461 gaaaatgcca agtggaagga ctatttgatc tgccgtttat ggatttagtg tttagagcgg
    17521 cacaagttca ccgtgaaaat tttgatgcta atgcgatcca gctttcaacg ttactctcaa
    17581 ttaaaacagg aggctgtccg gaagattgcg aatattgccc ccaatctgcc cgctatgata
    17641 cgggaataga aaagcaaaca atgcttgatg tagagacgat tgtagaaaaa gctaaaattg
    17701 ccaaagagcg tggagcaagc cgcttttgta tgggggctgc gtggcgagga cctaggccta
    17761 aagatattaa agtagtctca gaaatcatca atgcggtgaa atcattgggg ctagaaacct
    17821 gtggtacttt cggtatgctt gaagagggaa tggcagaaga attaaagcaa gcagggctgg
    17881 attactacaa ccataattta gataccgacc ctgaacgcta taacaaaatt atccataccc
    17941 gaaatcacga agatcgaatg gacactttag gtaaagttcg caatgccggc ttgaaagttt
    18001 gctgtggcgg tattgtggga atgaacgaaa cccgccccga gcgagcaggc ctaattgcaa
    18061 gcctcgctaa cctcgatcct caacctgaaa gcgtaccgat taatcagttg attaaagtag
    18121 aaggtacacc gcttaccaat gccgaagatt tagactggac agaatttgtt cgtaccattg
    18181 cggtagcaag aattactatg cctcaaagct ttgtccgact ttctgctggc agaactacta
    18241 tgccggaggc aatgcaagcc ctctgtttta tggcaggagc aaattctatt ttctatggcg
    18301 ataaattact tactacagaa aatccggaag aagatcatga tcgccaatta atggataaat
    18361 tagatttata tccgctacaa tatatagcct gagtgccaat gattttcgcc tgaatgaaaa
    18421 ttaaagaatc aatcgttatt ttacgcaaat ttctaacata aaataaccgc ttgcaaaatt
    18481 cgttcttgtc ttatttttaa atttatctat aatgtgaggc cttacgcaag cttgcgtaat
    18541 tcgatggggc gttattggtt cctcgcaatg gtgttcagct tacttgatca ggttcggaag
    18601 aaagcagtct gggttgaaat ttccgtgtgc cgagggaggc tggtaatgcc ccaccctttt
    18661 ttcagttcta tcaggagaac gttatgctcc agatcacccc cattccggca ttaaaagata
    18721 attacatttg ggcaatccgt aacgggcaag atgtgattat tattgatcca tcagaacatc
    18781 agccagcatt aaactttatt gcaaaaaatg cgttaaattt aaccgctatc ttgattaccc
    18841 ataatcacca cgaccatact gatggggtga gtggtattgt tgagcaatat ccgaatatcc
    18901 ctgtttatgg tccgcaagaa gtggctgaat ttgccaatgt gattgtctcg cctgaacaac
    18961 atatcagcct gtttggttat gatgtaagga ttattgaaag tggtgggcat accgcagggc
    19021 atatcagtta tttatttggc tatgattatc tgttttgtgg cgatgcgtta ttctccggcg
    19081 gttgcgggcg ggttttcacc ggtgattacc aagcccaatt tgatgcgtta caacgcttta
    19141 aaaatctgcc taactcggtt aaagcctacc cggctcacga atacaccaag agcaatttga
    19201 aatttgcaga agcggttcta ccaccaagct gtgtattatc ggaatatcaa gaacaggttg
    19261 atcttttacg ttcgcaaaac aaaccgactt tgccaaccac tattggcttg gaaatgcagg
    19321 tgaacccgtt tatgcaagcg gtcgatttag ccgaatttat tgcacttcgt cagcaaaaag
    19381 acaattttta acctcatatt tctaattaag cattaaagcc tctcacttta atgctttttg
    19441 gttaaataaa acctttgcaa acatcgcttg tcaattccac tctggcttat cctatggtat
    19501 agttacgact atttttagct taatttatta ttttagtgag taaaattctg tgaacttcga
    19561 tcctcaaaat atgcctaagc acgttgccat tattatggat ggcaatggca gatgggctaa
    19621 gcagaaagga aaattacgca tttttggtca tcagaatggt gtaaaggcag ttcgttctgc
    19681 agttagtttt gcagcaaagc atcatatcca agttttaacc ctctacgcat ttagcagtga
    19741 gaattggagc agaccagaaa ctgaagtttc agctttaatg tctctgttta tgaaagcttt
    19801 agattctgaa gttaaacaat tacataaaaa taatattcgc ttaaagatta taggcgataa
    19861 atccgccttt agcgaaaatt tacaaaaacg cattgccgaa tcggaaaaat taaccgaaaa
    19921 caatactggg ctaatcttaa acattgctgc caactatggt ggttactggg atattgttca
    19981 agctgctcaa caactagcag tgcacgttaa atctgaacaa cttgctgtgg agcagattac
    20041 accagcattg tttcaacaac atttagtgac agaaaaccag ccgcaagtgg atttattaat
    20101 tcgaaccagt ggtgagcagc ggatcagcaa ttttctatta tggcaaattg cttatgccga
    20161 gctgtttttt agcccggttt tatggcctga ttttaatgat gaggctttta gtgatgcaat
    20221 ttatgcttat cagcaacgtg aacgccgatt cggtggttgt taatataaaa agaataagga
    20281 aatacaatgc ttaaagaacg tgtactttca gcgattatta tgattattgc cgtgctggct
    20341 gccatatttt ggctctcacc acttccttta actttagtgt tatcggcaat tgttgtggct
    20401 gcaatgtggg aatgggctca atttgccggc tttaaacacc ctgtgccacg tgcaattgtg
    20461 gcaatggtga caatctgctt attacttttt gcgatcgttg cgaatactga ttatatccga
    20521 gccacccgtt ttattactga tgagactacc cctatcctct ttattggctg tatttggtgg
    20581 ttaattgccc ttgtcctagt ggcaacttac cccaactcgg caaaactgtg ggaaaaatct
    20641 gttgcagcta aattcctatt tggacttgct accttagtgc cgtttttaat tggcacgctc
    20701 gcattgcgtt tccataatta tgcatttgat ccataccaag gaacttattt attcctttac
    20761 gtctgtttat tagtttgggg agctgattca ggtgcttatt ttgctggcag agcctttggc
    20821 aaaagaaaac ttgccccaaa agtatctccg ggtaaatcgt gggaaggcgt aattggtggc
    20881 gtactcacct ctagtttgat tgcctttacc tttttacaac ttacaccggc aaatgtattc
    20941 ggcaaagcat tagccactac cccatttatt ttagtttcgg tcggtatggt tgctatttca
    21001 gtcttaggcg atttggcaga aagtatgttt aaacgccaag caggcattaa agacagtagc
    21061 cagttaattc ctgggcatgg aggtatttta gatcgtattg atagtttaac cgctgccgtt
    21121 ccgttttttg ctacattctt cttttttgta ctatagaata tgacgtccat cattgcattt
    21181 tttattttaa tttgcgtact ggtttttgtg catgaatacg ggcacttttg ggctgctcgc
    21241 aaatgcgggg taaaggtgat ccgtttttcg atcggatttg gtaaagtctt atttaagaaa
    21301 aaagataaac aaggaaccga atttgttttt tcacttattc ctctgggcgg ctatgtacaa
    21361 atgtggaatg atgaaacgga tatcaacgct ccagctcaac aagctcttaa cacaaaatct
    21421 gtattgcaac gtgcatttat tattatagcc ggtcctgctg caaattttat ttttgcgatt
    21481 ttggcatact gggtcgtttt tattgccggt attccaactg ttaaacctgt tattggggaa
    21541 attttaccaa acactatcgc ctcccaagca agaattccta ccgaattgga aattacaaaa
    21601 atcggtcatc aatctatcca agattgggaa agtgcatctt tagcactagt tggttttgtg
    21661 ggcaataaaa atgtaccgtt agagggaaat atcaacggca actcaacaca aaaatatgaa
    21721 ctcgatttat ctaactggag tattgactca gccaaagaaa acccattaac cgcattaggt
    21781 attcgcccca aaagtgcaaa agtcaccgct gaaattaaac aagttgtcga aaattctcct
    21841 gcaagccaag tgggtattca agcaggtgat cgtattcttc aaattaacca gcagccattt
    21901 aattggttca atttagttga actggtacaa gcaggtaaac ctattgaact taaaattgaa
    21961 caacgaggtc agattaaaga ccttgtcgtc caaccagaaa aaaaagacga acgctatatt
    22021 atcggggtaa taccaagtta tgagcctctt gcagataaat atcgtaccga attaaaatat
    22081 gatattctta ccgcatttta taaaagtatc gaaaaagtgt ggtctcttac ccaaaccata
    22141 ctccaattta tcggtaattt aataagcggt gatttgtcca ttaaaaattt aggtgggcca
    22201 atttcaatgg caaaaggagc cggtgcaaca gctgaaatcg gcttagttta ttaccttagt
    22261 tttatggctc taatcagtgt caatttgggg gtaatgaact tatttccact tttaccctta
    22321 gatggtgggc aacttgtttt attggctgtt gaagcaattc gtggaaaagc attatcagaa
    22381 aaaatacaac tcaaattcca acaaattgga tttgcattcg tgctgagttt aatgttattc
    22441 gcctttgcca acgatataat tcacttttaa caagcggtta aaaaaggtga cttttttgca
    22501 aaaagcaccc tgacatcaaa atccataata tggatttaaa ctatattctt aataattttg
    22561 caaaacgatc ataggataat ttcaatgaaa aaattattac tttcctctct tttaattgca
    22621 aacggtgtag ttgctgcacc tttcgtagta aaagacattc gtgttgaagg tgtgcaacct
    22681 acaacaggcg aatctatcat ttcatctatt ccggttagag taggtcaaac agcaacggat
    22741 actgacgtat ctaatgtcgt ccgccatcta ttcagccaac aacgttttgc agatgttcgt
    22801 gcaacacgag aaggcaatac gcttgtcatc aaagtcgctg aaaaaccgat tattggcaag
    22861 gtagagatcg aaggtaacca agcgattcct aaagatgcct tagagcaaaa tttaaaggca
    22921 aacttaatta accaaggtga aatttttgat gctgccaagc ttgaagcttt taaagaagga
    22981 ctaatcgaac attatcactc taccggccgt tatgaagcca aaattgacac atctgtttcg
    23041 aataacaccg aaggtggcgt taatattaag ttagcgatta atgaaggtga agttgctaaa
    23101 gccaaaacaa ttaagtttga aggtaataat gccttctctg ataaaaaatt attagaaaac
    23161 ttagatattc aacctgatgt ttcttggtgg aatatttttg aaagtagcaa attcgaacaa
    23221 accgcctatc aaaaagactt agaaacatta agagattttt atttaaatcg tggctatgca
    23281 aaatttgcta tccaagatac cgatgttcaa ttcaatgata ataaaacgga agttgcattg
    23341 acctataaat tagatgaagg gtcacagtac catgtcagtg aaatgcgcat tatcggtaat
    23401 acagccaata tggatagcca gctcaacgcc ctactaaaag aattcaagcc tggtcaatta
    23461 ttccgtaaat cagaccttac acaaattgaa gaagagatta aatctatttt aggggacgca
    23521 ggttatggtt cagctaaagt agatatttat cctcaattta atgaagaaaa taaaaccgta
    23581 aaaatcagtt ttgttgtgga tgccggtcgt cgtatttatg ttcgtaaaat ccgttttgaa
    23641 ggtaatggtg tcactgcaga ttcaacatta cgtcgtgaaa tgcgccaaca agaaggtgct
    23701 tggctttcca caaacaaagc ttctctaggt aaagctcgtt tagaaagaac cggtttctat
    23761 gaaagtgttg atatgtcaat gccaaatgta gaaggtacag ccgatcaagt tgatgtagtg
    23821 tataaaatta aagaacgcaa taccggtagt attaactttg gtatcgggta cggcacgaaa
    23881 aacggtatca gctatcaagc aggaattaaa caagataatt tcttaggtat ggggtcaact
    23941 atcagtctaa atggtacccg taataactac ggtaccagcg ttaacctagg ctataccgaa
    24001 ccttacttta ctaaagatgg tgtaagttta ggcggtaata ttttctatga agattatgat
    24061 aactcagaca atgattcaat ggcttcatat aaacgccaaa cctatggtat taacggcaca
    24121 ttaggcttcc cggtaaatga aaataactca tactacttag gtttaggcta tacgcacgat
    24181 aaaattaaaa atgcagcacg tgagtacact cgtgagaaat atgtaaaatc aatgaacttt
    24241 gagttcgatc cagctgccga ttattacaaa aaaatcaaag ctgatgattt tgatttttct
    24301 ctcggttgga actacaacag cttgaataga ggctatttcc cgactgaagg aactaccgca
    24361 aacattggcg gtaaaatcac aattccaggc tctgataata aatattaccg agtcagtgca
    24421 gactttagaa attattaccc gttaaaccgt gagcacaaat gggtaatttc aacgaaagct
    24481 agcattgctt atactaatgg atttggtggt aaagaagttc cgttctatca gctttatact
    24541 gccggaggta ttggtacact aagaggtttc tcttacggtg cagtagggcc tcaagcgatt
    24601 tactataata caaaatccgg caaatttgat agcatgaata atgatattat cggtggtaat
    24661 gcgttagctg cggcaagctt ggaattaatc acaccaacgc catttgtgag cgaaaaatat
    24721 cagcacaatg taagaacctc tctctttgtt gatgctgcaa gtgcatggaa tacaaaatgg
    24781 aagaaagatg aatatacgaa cttgcctgac tatggtgatt tcaaacgttt ccgtgcttcc
    24841 gccggtattg cattccaatg gatgtctcca atcgggccat tatcattctc ttatgcgaaa
    24901 ccaattcgta aatatgataa tgatgatatt gaacaattcc agttcaacat tggtagttca
    24961 ttctaattaa ccacaagcgg ttaataaatg taaaaaattt gcaacttagc cgcttatttc
    25021 aaaactgttc atacaaggaa aacaaatgaa aaaattattt aaaatgactg gcttagccgt
    25081 agctttagcc tctacaaccg gaatcgcgaa tgctgcagat actattggtt tcgtagatcc
    25141 aagctatgta ttacaaaacc accctgtatt attagatgct tcggcaaaat ttgataaatt
    25201 catgaaagaa agccaagaaa aatttgctgc tgatgaaaaa aaattagcag atgaaaataa
    25261 aaccttaacg gctgagcgca ataaaattaa tgaagatgcg caaaaattac aaaatgaaca
    25321 aaaaaatgta gaagcttcta tcaagaaaaa agtggcagca ttagagaaag atgcgcctcg
    25381 cttacgttca aaagagattc aagcacgtca aaatgcgatt caaaaagaag caaacgcatt
    25441 ccaagctaaa gtaacagcaa ttcaaaaacg tgaagctgat tttgcaaaaa aagcagaagc
    25501 cttccagaaa cgtgcagatg aattccaaaa acgtattgaa caagcgaata aagaaaatgg
    25561 tggcattaac ccacaagaag cgcaaaaaca agcggttgat gaagtaaatg caaccattaa
    25621 agagatcgca aaatcgaaag gttacacttt agtattacaa ccacaagtag cactttatgc
    25681 tgaagatgaa ggtaaagata ttactgaagc agtacttgat gctattgtta aaaaacatcc
    25741 ggaaattaaa atagaaaaac ctgcaactga agctcaacca gctacagaaa aagaaaccaa
    25801 agctgaagaa actaaaccag aagaagcgaa aaaataatgg caaatttccg tttaattgat
    25861 ttagcggagc atatcggcgg tactcttagg ggtaacgccg atttggctat tcaaagtatt
    25921 gctgctttag ataaagccga cagctcgcaa attaccttta tctcaaatgc aaaatatcgg
    25981 gaaaatttga ccgcttgcaa tgctggagct attatcgtca gcccggcaga tgtagaattt
    26041 tgccgagcag atcaaaatct tatcatcgtt gccaatccgt atgttgctta tgctcaactg
    26101 gctcaatata tggattctac tccgaaagca gcgagcgaaa tccacccaag tgcggtgatt
    26161 tcacctgaag ctaaactggg taataacgta tcggtagggg caaatgccgt gattgaaagt
    26221 ggcgtagaat tgggcgatga tgccgtgatc ggtgcaggct gttttgtggg aaaaaacagt
    26281 aaaatcgggg caagaaccca actttgggca aatgtttcgg tgtaccacaa tgtacaaatc
    26341 ggagctgatt gcttgattca atcctcaacg gttatcggga gtgatgggtt tggctatgcg
    26401 aatgacaaag ggcaatggat taaaatccca caaaccggtg gtgtgattat cggtaatcgt
    26461 gttgaaattg gtgcttgcac ttgtattgac cgaggtgcat tagatccaac cgtaatcgaa
    26521 gataatgtga ttattgataa cctttgccaa atcgcccata atgtacacat tggttttggc
    26581 actgccgttg ccggcggcgt cattatggca ggcagtctaa aagttggtcg cttttgccaa
    26641 attggtggag caagtgttat caacggtcat atggaaatct gtgatggtgc cataattacc
    26701 ggaatgggta tggttatgcg cccaattaca gaaaaaggaa tttactcatc aggtattcca
    26761 ttacaaacca ataaagaatg gcgaaaaacc gcagcacttg taatgaatat tgatgaaatg
    26821 aacaaacgct taaaatcgtt agaaaaacgt tttaacgatt aattttatta gaggtcttaa
    26881 agtgacagaa atgacaactg aaaatcgtga gccaaatatt attgaagtaa ccgaaattat
    26941 ggatatgtta ccgcatcgct accctttcct gttagttgat cgcgtaaccg attatgaaga
    27001 agggaaatgg ttaaaagcca ttaaaaatgt aaccttcaat gaaccttgtt ttaccgggca
    27061 ttttcctggc gcaccaatct tcccaggagt attgattctg gaagcaatgg ctcaagcaac
    27121 tggcgtatta gccgttgcca cttatggtaa gttaagtgaa gacgaactct actattttgc
    27181 cgcaattgac aatgctcgct ttaagcgacc ggttgtgccg ggcgatcaac ttcaacttga
    27241 ggttgaattt cttaaagaag tacgtggtat tactaaattt accggtaaag catacgttga
    27301 tggcaaatta gtctgtgaag cagatttaat gtgcgctcgc cgtaaataat tcgatataag
    27361 cccaaactag agggaacaaa ctatgcgtct aattgattca acagcaaaaa ttagcccgct
    27421 tgccatcatt gaagaaggtg ctgaaattgg cgctcacgtt gaaattggtc cattttcagt
    27481 catcggtaaa gatgtcaaaa tcggggctag aacgaaaatt cactcaaatg ttgtcattaa
    27541 cggcatgact gaaattggtg aagataacca tattttccaa tttgccagca ttggtgaaat
    27601 caaccaagat ctaaaatacc aaggtgaacc aaccaaagtg gtgatcggta atcgtaaccg
    27661 tattcgtgaa agtgttacta ttcaccgagg tacggtacaa ggcggtggcg tgacgaaaat
    27721 cggtgatgat aacttattta tgatcaacac ccacatcgca cacgactgct ctatcggtaa
    27781 ccgttgtatt atcgccaata atggtacgct agcaggtcac gttaccctag atgatttcgt
    27841 gattgtggga ggaatgtccg ccattcacca attcgttgtg attggttcac acgttatgct
    27901 tggaggcggt tcaatggtca gccaagacgt accgccttat gtcatggcac aaggtaacca
    27961 cgcacgccca tttggtatta actttgaagg gttaaaacgt cgtggctttg ataaaccaac
    28021 tatgcacgct attcgcaaag tctataaact gatttactcc agcggaaaaa cattggaaga
    28081 gtgcctagta gaaattgagc aaattgcagc aacagaacct gcgattgcta tttttaaaca
    28141 attcttcaaa cgttctaccc gtggtattat tcgttaataa acgaaacccc gaaatcaatt
    28201 cggggtttgt tttatcaagc gaccgtcgaa cctttcaaca attttcgaat ccaagctcga
    28261 tttgggctaa ggttatgcca aatatcctca ctgattggca caggctcatt cacaatcagg
    28321 cttgctaaca attcccctag aagtggtgca gtcgtcaaac ctcgagaaga caggccgttt
    28381 accatataca gattggtaaa aatttcagca ttttctaccg cttgtttccg tctcaactgg
    28441 ttgtataaat tggcatattg gcttttttgc tgctcaaaat gatgcactgc cccaaccatc
    28501 ggtacacgat cacgaaacgc cgcacgaata ccgactttgg ctttattttc agataaatca
    28561 attccttgcg tccactcaca aacggttaca ttttgctgaa gttttgcaac attctcccaa
    28621 tgctccgata aactaaactc ggtttctgca ttatcccgaa tatggcttgc tccaatgcaa
    28681 tgcgtgccat aggctgacat tggcgttaaa taaccatcat aacaaagcac acacttcagt
    28741 ttttgtaatt cgcttgtagt cggaatttgg ctcacttgcc ctcgtaccgg atacaacgga
    28801 atgccgttcg cttggctaaa ttcattcaac gtatgtccat ttgccagcac aaccgcttga
    28861 tgtcgaaccg tttctcccct cgtctgccat tgccacattc cattagaaaa ggttaaatgc
    28921 tcaactttgt gattcagtac aatcttcaac cctttctgct ccagccaagt aaagccattt
    28981 ctaacaagtt gtaccggtga aagccaacca gcttgcggaa taaatgcccc gctgtttggc
    29041 acgcttaaac ctaatttttc acttaattct gcctgtgaac aagattttaa taaggtgtca
    29101 tcagccgtct gctccaccat tttttccagt tttttagccg ttttctcgtc ataggcgtaa
    29161 agcactaccc cgcttaaatt atgctcaaac tcaatgttgg atttcagttg ttgcaagcgt
    29221 tgcaatgcat aatcaaaact atggatataa aactgtacat ttcgctcgtc atcatcgctt
    29281 aactgtgggt aaatcgcccc ttgtaaattt cctgaagcat ttattgccaa ggtttcatct
    29341 ttgcaataca gcgtgacttg cttgcctttt tctaacagcg ataacgcaac gaagaaactc
    29401 gctactccgc caccaataat tgcaatgtca tcagcggttt catttttggc ataaaaatag
    29461 gggtaattag gctcggaaac ttggctatct aacggtttct cgccccaaag catttctcgt
    29521 tttttgccaa atcctttgcg ttttttcact gcaaaacctg cggcttccag ccctcgtctg
    29581 accatacttg aagcggtaaa agtagcaaaa ctgccgccat tggcacttag tcgaaacatt
    29641 tgcagatata actgttcgtt ccacatttct gggtttttat caggcgaaaa gccatctaaa
    29701 aaccaagcgt caatcgtgcc gctataaaga tcgcctaatt ggggtaagtt ttcagcaatc
    29761 tcaccgaacc ataaatctaa ataaacctgc tcaaaatgat aacgttggca acctatttgg
    29821 cgaggctgcc aacaagcggt taaattttca gataatgttg caaattgcgg atagcgttgg
    29881 tgaatatcag ctaattggct ggccgtcaga ggaaatttct caaatgagat aaaatagagt
    29941 cgttttagtt tactttgcgg aaatgctgcc cgaaactgtt ggaatttgtc agcaacggct
    30001 aaaaaattca agcccgtgcc aaagccggtt tccgcaataa caaaagcctc tttcgggtga
    30061 gattgccact tttcccacag ttggttacct tcttgaaaca catagtaact ttccgccaaa
    30121 ccatcttggg tagaaaaata aatatcatca aattgctccg acaccggtgt atctgcatca
    30181 ttaaatgtaa gtgtcgcaaa agtcagttta cccatcatat ccccttaaaa acaaaacacg
    30241 gaaaacccca agattttccg tgtttcaacc agttcaatag taccaatgtt agaaaatgtt
    30301 gctggcaaaa ataacgatca taccaagtgc gcctacaacc gttagcattg aataaccaaa
    30361 agtacccatt ttacaatcct cattgttaat tatgattaaa acggctttat tctagcataa
    30421 tttccatcgc tttgaatgcc tatgcttgaa taattttgcc aaaacaagcg gtcaattttt
    30481 gtaaatcttt tacgcctttg gcactttcca cgccagaatt taaatctaac ccgacacagc
    30541 cttgagcaag ggcttgctca atattctcag tgccaatacc acctgccaat aacgcttttt
    30601 gttttaaggt ttctggaatc aacgcccaat taaaggtttt gcctgtgccg ccttgctgat
    30661 tgcctacttt gctgtctaat acataacgag caatctgtgg attatcgtta aattctagat
    30721 tttcaacctc aacatcaacc gataaggctt tccagatttg agttttacta cctaatttct
    30781 ctgccagttc tgcaatgtat tgctcatctt ccgagccgtg caattgaact gcaaataact
    30841 caagctgttt tgccattttt tccacaaatt cgaccgcttg attttggaac acccccacat
    30901 aacgcaacgg tgcattcacc accaattctt gggcttggcg aagtgaaagc tggcgaggcg
    30961 agccttcggc aaaaattaaa ccgccatata atgccccttg ctcataaacc gctttcacat
    31021 cttgcacacg ggttaagcca cacactttgt tttcaccaaa aatcaccgcc cgcaccgcat
    31081 tattgagatc ggcacttccc attaaactgc tgccgattaa aaaagcatga acatacggct
    31141 taatgttttt cacttgctgg tgatcgttaa tacccgattc tgaaatcaaa cagacatcag
    31201 ccgaaatttg ggcttggtat ttttccacca aacgcacaat gcggttcata tcaatcgtga
    31261 gcgtgtgcaa atcacggtta ttaacgccaa ttaccttcgc ccctaaggct aaggcacgtt
    31321 caaattccgc ctccgtgctg gtttcagtca aaacgcccat tcctaactcg tgagccagtg
    31381 tggcaagttc acggtaggtt tcatcattta ccaccgataa catcaataaa atcgcatcag
    31441 cattataaaa acgggcaagg taaacctggt atgccgaaat cataaaatct ttacacaaaa
    31501 tcggctgtgt ggtttggcgt ttgacttgat cgatataacg gaaatcgcct tgaaaatatt
    31561 gctcatcggt taaaaccgaa atcgccgcag cgtaattttt atacacttgg gcaatactgt
    31621 ctaaatcgaa ctcagcacga attaaccctt ttgacggtga agctttttta cattctaaaa
    31681 tataagctgg ttcttggtgt gtgcctttgg caagagccgc atagaaatca tggtcgcttt
    31741 ttacaatttt gtgctgaaat tcacttaacg gaaaggcttg ctctttttgt gccacccaaa
    31801 tggctttatc ttgtacgatc ttttgtaaaa tcgtcggttg gtttggttga gcgttatctt
    31861 gaacgatgtt ttgcatataa attcctagag cgaaatcggt ttgaatggta aaatctgccc
    31921 ttatttttac ccgaaaaagt ctcatttcac aagcaaaact aagatgaaat cacaagttat
    31981 acagcattta tcttatttag aaatcgccct gagagttaat caactttggg aggcgacacc
    32041 accaagccct gaagccttag ccaatgagca acctttctgc gtggaaacct taaccccaac
    32101 ccaatggcta caatggattt ttattcccag aatgcgggcc attttagatg caaatgccga
    32161 tttacctcgc aattttgcaa tcacccctta tttagaagag gcattgaaaa acgaaggtta
    32221 tttacaagcg atttgtgaac cgctattagg tttggaaaag ttgttgaaag attaacttct
    32281 ctctcagttc ttttattaat ctgacaaatt cgttgatagt gccagcgtcc acgctggtac
    32341 taattttaac ggttaattaa tcaaaatttg gcacaagcga ggacgcttgc gccatcatag
    32401 agatttgata aattatactt aatgtattat gaccttagat attttatacc aagacaactc
    32461 gcttatcgcc atcaacaaac ctgccggagt gttggtgcat cgttcttggt tagataaaca
    32521 cgaaacggtg tttgcaatgc aaaccctgag ggatcaaatc gggcaacacg tttttccgat
    32581 tcaccgcctt gaccgcccaa cctcaggtgt attgctgttt gctctcaaca gcgaaaccgc
    32641 ccgaataatg agcgagcagt ttgaacaaca cctagtacaa aaaacttatt tggcggtggt
    32701 gcgtggctat ttacaaggtt cggcacaaat tgattatccg ctcaaagtga ttttagataa
    32761 aattgcggat aaattttctc aggaaaaaga ggctcaagcg gcgattactg attataaagg
    32821 cttagcaacg gttgaaatgc cttaccctgt cggcaagcac caaacctctc gttatagttt
    32881 ggttgaactt agccctaaaa ccgggcggaa acatcagctt cgccgccacc tgaaacacct
    32941 gttccacccg attatgggag acagcaaata tggcgactta caccaaaacc gtgctttagt
    33001 tgaaaaatca ggcgtaagtc gtttaatgtt acacgcccat aaattgcaat ttcagcaccc
    33061 gaaaaatttg caaaaaatag agataattgc atcgcttgat gagcaatggc aacgcctctt
    33121 tgcatttttt gactggaact ttactcaata ttattagaca aaaaagagga ttgaatggat
    33181 aattcacttt tatcattgac acacgagcaa caacaagccg cagtagaaga aattcaaaaa
    33241 ctgatggcac aaggcatcag tgccggagag gcaattcaaa ttattgctaa tcaattacgt
    33301 gacaaatatc aaatattgga gaaatcaaac aatgaataaa ttatggacag tgcttgccct
    33361 aacaataact tcccactata gctttgctgc cgctgaaaaa atagtcacta aagatttacc
    33421 ggcagaagga aaacctgcag tcgtgctaca ggtttttgat gaaagtgaaa aaattgcaaa
    33481 acctattaag ggaaataagc tctttattag caaaaaacaa acaaggcttt gctggcacag
    33541 tattaatctt cctgtacaaa ataaagttac tattgcagaa gctttctatg cccctgctgc
    33601 aatgaaatta gcttctcccg gctctaaaat taattcttct gcagacaaga aaaatcatac
    33661 tatcattact gaaataaacc ttgcaaataa tcaagtatta aatcgttgct ggggttttga
    33721 taaaactgac cctgtcggta aatacaaaat ggaaattcaa attaacgatc acattttcaa
    33781 aggtttagaa tttgaaattg taaaataacc taaaagccac agagtaacac cctgtggctt
    33841 tttgctaaat cattgttttt aaattggtta aattgtgcag caaataatct ttactcttca
    33901 caaaggctct cgcctgttgc cagttgctaa attgttgctg agtgcattga ttaaaacgta
    33961 ccagcacttc caaactttca ttgccgacac aaataaaatc agctaataat tgggttaatt
    34021 tttcactgtt ttcaccatcc attgcagttg caattttctg ctcccattta accgcttgtc
    34081 cgagcaaata accccgctgg gctttgctta aattactcaa ccacatccca tccgcttttg
    34141 gcattgcctc aaccaaagta aataagtcgc ctagatttcc ttgcttgatt tcaaactcca
    34201 attcacaaat cggctcttca ccaaaatgat ttttaatgat gccctgatct aacgctacct
    34261 caatgtcaga catccccact tgcaccaacc aagttttacg agtgaaatcg gtgctgaata
    34321 tcgcttgcaa gctttctgca atctgctctg aattttcaaa cggcaactgg tatttttcca
    34381 ctaatgtttg aaaatccggc tggctattgg gtaaagctaa attatattcc ggacgaatat
    34441 gcaaaccgcc tacaatttcc ccttgtgttt ttaacgtgat ttcatattgt tgattcacag
    34501 aacgcacccg cagccccatt ttttgcgtgg caaaaaattg ctcgggcgta tcataatagg
    34561 tgttgcctaa caattccgtt tgatgagcaa gcacagggaa tggcgaggtt tgattcaagt
    34621 agttttccac taacgccaca ttctgctgtt ccaacattat tttcagttcg atttctgctt
    34681 gtttttggtt ttccatttca cacgcccctg caacgttgta taatcaagcg gttattttat
    34741 caataaattt tgcaaaatgt tttcaaaaat tcaccataaa ctgaataact ttgtccagcg
    34801 tggactcgac aaccatttac gcctcgccgt taccggctta agccgtagtg gcaaaacggc
    34861 atttattacc agcttggttg atcagctttt gcatatcaac aaaggcggta attcgcattt
    34921 aaacctgttt gcgcctgcac gccacgggca aattctatcg gtaaaacgcg ttgagcaagg
    34981 ggatttaact attccccgct ttgaatatga taaaaaccgc caaagccttg aaaatcaacc
    35041 acctcaatgg cctgaatcca ccactggcat tagcgaaatt cgccttgcga ttcgctacca
    35101 gcggcaacat tctctgctac gtcatattaa agaaaccggc acgctttatt tggatatttt
    35161 cgattacccg ggcgaatggc tgttagattt acccctgctc tccctttcct ataaagaatg
    35221 gtcgcaaacg caacaaacca tacataaaga tgagcgtgca gagcttgcca caccttggtt
    35281 acaagcggtt aaaaaactcg atctttttgc aaaaaccgat gaaaatttac tggcagaatt
    35341 cagccaacaa tacaccgatt atttgctcgc ctgcaaagct caaggaatgc aatatattca
    35401 gccggggcga tttgtgttgc caactgaaaa tgccaaaggt gcaccggtat tccaattttt
    35461 tccgttatta gatttaagcg aagctgagtg ggaaaagttg gaacaaagcg acagaaacag
    35521 tattttccat accctcaaaa aacgctatga gcattaccag aaaaaaatcg tcaaaccgtt
    35581 ttatgaagat tacttctctc aatttgaccg ccaagtgatt ttggcagact gcctcacacc
    35641 gttaaattat ggctataacg aatttatgga aatgaaatta gggttacagc aactgtttaa
    35701 acatttccat tatggcaatc gttcgctatt tcaccgtctg ttttcgtcca acattgataa
    35761 attgctattt atcgcaacaa aggcagatca cattactagc gaccaagtgc cgaatttgga
    35821 aagcctaatg cgacaattag tgcaagaagg gggaagacac gcagaatttg atggtatcga
    35881 aaccggctat ttagccattt cctcgattca agcaaccgat gcggtgaaag tgactcagca
    35941 agataaaatc attaaagcga taagagggat ccgttccagc gatagaaaac aagtgacact
    36001 ctaccctggc agcgtgccaa atcgcatacc cgataaaaat tactggcaat ttaaccgttt
    36061 tgaattcgac caattcgagc ccaagcaact tgattatagc caagcgattc cacacttcag
    36121 aatggattcg gtgctacaat ttttattggc ggatatgttt gagtaaaatc ttgttgcata
    36181 tttccattaa aggtataaaa ttttatacat tatgaatact gtaatttccc aacgaaaacc
    36241 aattcactgg gttggatcaa ccttagatga tattcgtgaa tttccggata acattaaaag
    36301 agaactcggt tttgatcttg atttagttca gcaaggctta ttaccgaggg attttaaagc
    36361 gatggcaaat ttgggttcag gcgtaatgga aattcgagta aaagatccct caggggcttt
    36421 tcgcttagtg tatttagcta aatttaaaga tgcaatttac tgtttacacg ctttccaaaa
    36481 gaaaacgcaa aaaacagccc ctaaagacat tgctgtcatt aaagcacgct atgctgccgt
    36541 aaaggagtta gaaaatgaat aatattgata ctaaaattcg ccatactaca gaagctcagg
    36601 gtaatgtttt tgaagatctt ggtttcccta ttgatgaagc tcaaaaattg aaatctgcca
    36661 gtcagcaact gattgaaact aaactgatgc taatgaatga aatgagcaac tggattgata
    36721 aaaataatct caaacaatca gaagcggctt ctattctagg tgttagccgc cctcgaattt
    36781 ctgatatggt caatggcaag ttagaaaagt ttaccctaga taccttagtc acttttgttg
    36841 caaaaaccgg caaaacaatc caattgcaat tatcctgata tttgcaaaat tttactcaaa
    36901 ttcaaccgct tgttgctttt atcattcact aacaaggtta tttcaagtaa aattgtgact
    36961 aattttttat taataaacac aaattatggc aaaaaaacct aaagttgcat caaatacgat
    37021 tgcgttaaat aaacgtgcca gacacgaata tttcattgaa gatgaaattg aagccggctt
    37081 agagctacag ggctgggaag tcaaagcatt gcgtgccgga aaaggcaata tcagcgatag
    37141 ctatgtcatc tttcgccacg gcgaagcctt cttattcggg gcaatgatta cgcctttgaa
    37201 tatggcatca acccatattg tcagcgaccc gacccgcacc cgcaaacttc tactgaataa
    37261 acgtgagtta gactcactgt tcggtaaagt taatcgtgaa ggttatacca ttgttgccac
    37321 ctcaatgtat tggaaaaatg cgtgggtgaa agtaaaaatc ggcttagcca aagggaaaaa
    37381 actgcacgat aaacgtgaag atattaaaga ccgtgaatgg caagtggcta aacagcgtat
    37441 tatgaaaaac gccaatcgtg gctaaatgaa taattaccct ctccccttgt gggagaggga
    37501 cagaaaaatt gcgttcagca atttttcagg gaaaggggga tttgtaaaag ttcaaggaaa
    37561 aacaacgctt gccctctctc tgaaaaatat ttctgaacga aatatttttc ggtctctctc
    37621 ccataaaggg agagagtgaa acacaaattt aaactaagga acatacaatg atcgaccaaa
    37681 acctacttcg taccaattta gaagacgttg ctacagctct taaaatcaaa cgtaatttta
    37741 ttttagatgt agagcgagta aaaacccttg aagaacagcg taaaacgcta caagttaaaa
    37801 ccgaaacctt acaagcagaa cgcaacactc gctccaaaaa catcggtgcg gcaaaagctc
    37861 gtggcgaaga tatttcagct ttattagccg aagtagattc aatgggcaac gaattagaca
    37921 cggcaaaagt agaattggat aaagtacagg cagaaatccg tgagttgttg ctttctgtgc
    37981 caaacttacc ggcagatgaa gtaccactcg gtaaagacga tagcgaaaac ttagaagtat
    38041 tacgttgggg cgaaccacgt caattcgact ttgaagttca agatcacgtt acccttggcg
    38101 aaaacttaaa cggtttagat tttgctgccg gtgtaaaatt aaccgccagc cgttttgtgg
    38161 taatgaaagg taaacttgcc cgcttacacc gtgcattatc tcaatttatg ttggatttac
    38221 acactgaaca acacggctat gtggaaacca atgtgccatt tttagtcaat cacgacactc
    38281 tatacggcac aggtcagcta ccaaaatttg gcgaagattt attccatact caaccattaa
    38341 cagggcaaga tccaaacgag gtgcaacgcc cattcggttt gattccaacc gctgaagtgc
    38401 cagtaacgaa cttagtgcga gatgaaatca ttgatgaaga cagcttacca ctgcgttata
    38461 ccgcccacac cccttgtttc cgtgcagaag ccggttctta tgggcgtgat actcgtggtt
    38521 taattcgtat gcaccaattt gaaaaagtgg aaatggtgca aattgtcgcc cctgaaaaat
    38581 caatggaagc cttagaagaa ttaaccggtc acgcagaaaa agtcttacag cttttaggct
    38641 tgccataccg caaagtgcta ctctgcactg gtgatatggg ctttggtgca gcaaaaacct
    38701 acgacttaga agtttggcta ccggcacaaa acacttaccg tgagatttct tcttgctcaa
    38761 atatgtggga tttccaagcc cgccgaatgt ctgcacgttg taaagctaaa ggcgacaaga
    38821 aaactcgctt ggttcacacc ttaaacggct caggtttagc ggttggtcgc acactggtcg
    38881 ctgtgttaga aaactaccaa aatgccgatg gctctattac tgtgcctgag gtgttaagac
    38941 cttatatggg tggtttggaa gtaattaccg cttaagatta ataaatgaaa ccaatctcag
    39001 aaatggggtt ggttttttta ataaatctta tccctaatct ttttcaggat aattcataaa
    39061 aatttcagta actactcggc ggttttgcac tgtatctaaa cgaataggat ttttcattct
    39121 ccctaaacga aatgcaataa tggtgacttt tttcggttca tctattttat ctaattgata
    39181 gaataccatt atttcccgtt gataaaccgc tcgctttctg aaacgtaaat ccttgcgaaa
    39241 tgcgacacct gcttttggat aaaactgtaa accattgatg atattcgttt gagtatgctc
    39301 cgaaaataat ccatagaaaa taaactctaa tagattattt ttaaaatcaa cactaaccat
    39361 ctaactgctc ccaagcagtt aaatctcctc gtgataaacg ttcagcaata tcagcataaa
    39421 attgtttcgg tacttccctt tttacttggt attgagctga ttgttcttct aataaatgtt
    39481 cttctatcat cttgatttct tctgttgtcc actcttcatc ttctttatgt acaacaaaat
    39541 cggtatctac aatcacaata gacataccta gctccttcaa gtactggtta tatattctgt
    39601 attttgcctg ttctaaattc agctgtctag cttttctgtt actcacaatt tgcaaatttt
    39661 tcatcaaatt ccaccgcttg ccattcaaaa aaaggcgttt ttgcggtatc ctatcggcaa
    39721 ttttttcagt taaatttaaa ggttaaattt tatgcaacag cagtataacc caagtgagat
    39781 tgaacctaag gttcagcgtt attgggcaga aaataaagtt tttaaagcag ttaaagacgt
    39841 taccaaagag aaatactatt gcctttcaat gttgccttat ccgtcaggta agctacatat
    39901 ggggcacgtt cgtaactaca ccattggtga tgtagtgtct cgttatcagc gtatgatcgg
    39961 taaaaatgta ttacagccga tgggttggga cgctttcggt ttaccggcgg aaggtgctgc
    40021 ggtgaaaaat aataccgcac cggcaaaatg gacttacgaa aacatcgaat atatgaaagg
    40081 tcagcttaaa atgttgggct tctcttatga ctgggatcgt gaagtcacca cttgccgtcc
    40141 ggaatactac aaatgggagc aatggttctt cacagaactt tataaaaaag gcttagtgta
    40201 taaaaaaacc tcaaccgtaa actggtgtcc gaatgatgaa actgtgcttg ccaacgagca
    40261 agttcacgaa ggttgttgct ggcgttgtga caccccagtg gaacagcgtg aaattccaca
    40321 atggtttatc aaaatcactg actatgctga agaattactc aatcagttag ataatctccc
    40381 acagtggccg gatcaagtaa aaaccatgca acgcaactgg atcggtcgtt ccgaaggggt
    40441 agaaatcacc tttaaaattg ccggttcaaa cgtagaatta ccggtttaca ctacccgtcc
    40501 ggataccttc ttcggcgtaa gctatgtggc gattgctgcg gctcacccat tagcagaatt
    40561 agctgcacaa aataacccgg cattggctga atttatccgt gaagcgaaaa acaccaaagt
    40621 ggcagaagca gaattagcca ccatggagaa aaaaggaatg gcaaccggct tgttcgccat
    40681 tcacccgtta acaggaaaag aagtaccggt ttgggttgct aactttgtgt taatgcacta
    40741 cggtacaggt gcggtaatgg cggttccggc tcacgatgag cgtgactttg aatttgcaca
    40801 aaaatacgat ttgcaaatta atcaggtaat tcaaccgctt gatggctcag agtgggattt
    40861 cagcaaagcc gcttacaccg aacacggtaa attaatcaac tctgccgagt ttgacggctt
    40921 ggaatttgat gtggctttca ctgcgattgc cgataaatta gaggcaatgg gtgtaggtaa
    40981 acgccaagtg aatttccgtc tgcgtgactg gggtgtttct cgtcaacgtt attggggtgc
    41041 accaatccca atgatgacca cagaagaggg cgaagtggtt accgttccat tacaagattt
    41101 accggtgatt ctccctgaag atgtggtaat gaacggcgtg caaagcccaa tcaaagccga
    41161 cccagagtgg gcgaaaacca cttacaacgg caaaccggca ttgcgtgaaa ccgatacctt
    41221 cgataccttt atggagtcct cttggtatta tgcacgttat acttgcccac aatatcacga
    41281 aggaatgtta gattcagacg aggcaaacta ctggctaccg gtcgatcaat atatcggcgg
    41341 tattgaacac gccacaatgc acttgctcta cttccgtttc ttccataaat tgttgcgtga
    41401 tgcgggtatt ttaaattcgg acgaaccggc gactaaactg ttatgccaag gtatggtgct
    41461 tgccgatgcg ttctactaca ccagcccaac taacgagcgt atttgggtca gcccgacaca
    41521 agtcacctta gaacgtgatg agaaaggtcg tatcatcaaa gcaaccgatc cacaagggcg
    41581 tgagctggtt cacagcggta tgactaaaat gtcgaaatca aagaacaacg gtatcgatcc
    41641 gcaagaaatg gtggaaaaat atggtgctga cacagttcgc ttgtttatga tgtttgcctc
    41701 ccctgcggaa atgacattag aatggcaaga atccggcgtt gaaggggcaa aacgtttctt
    41761 aggtcgtgtt tggaatttag tttatagcta tgcccaaaat ccggcaacga ctgcattaga
    41821 tgtgaatgcc ttagacaagg atcaaaaaga acttcgccgt gatgtacaca aaacgattgc
    41881 taaggtgagt gatgatattg gtcgtcgtca aaccttcaat acagcgattg ctgcggtgat
    41941 ggaattgatg aacaagctca ccaaagcccc acttgaaacc gaacaagata aagccgtaat
    42001 ggcagaagct ttaagtgcgg tggtgcgtat gctttaccca atcacgccac atatctgctt
    42061 tgagttatgg caagtgttag gtaatgaaca aaccatcgat tttgcccctt gggtacaagc
    42121 cgatgaatcc gcaatggtgg aagatgaaaa attagtggta gtacaagtca acggaaaagt
    42181 gcgtggcaaa atcactgttt cagctactgc tacggaagat gaagttaaag ctatcgctaa
    42241 agccgatcca aacgttgcta aattcttaga tggtcagcag attgtaaaag aaatctacgt
    42301 tccatttaaa atgttgagct ttgcggttaa ggcgtaacaa acacactctc ccttatatgg
    42361 gagagagacc gataaatatt tcgtgcagaa atatttatca gagagagggt acaagcggtt
    42421 attttcttgg aaaattttgc aaaaaatagc cccctctccc tgctttttct tctaaacgaa
    42481 gaaaaacctg tccctctccc acaaggggag aggggaataa acaaggaaat ctcattatga
    42541 ttaaaaaact ctctctcatc gctgtttttg ctcttaccgc ctgcggttgg cactttaaaa
    42601 acaatgaggt attacctgaa tcgttcagaa cattaacctt tgaaagtgca gatcaacaca
    42661 gcgaaatgtc tcgaatttta cgcaatcagt tacaactaag cgatgtaaaa ttagtgccta
    42721 gcacggctaa tgtggcaaaa ttacgtttgg tttcaacctc aacagacagc aaagtggttt
    42781 ctgtgtttaa acaagctcgt gaagcagaaa aaatcttaac gctaaacgtt gatgcgattg
    42841 ccgatattcc aaataaaggg caataccctt tagaagtttc ggttcatcgt actttctttg
    42901 atgactctcg tgcagctttg gcaaagtctg ctgaaaaaga gatgattatg aaagatatgt
    42961 atgaacaagc ctctcgccaa ttaattatca aaatggcggg cttaaaaaaa gaactctcaa
    43021 aataatcatt gtaggggcga aatatgtttc gcccattgtt tatctgtatg caaaaaatct
    43081 ttccggaaac acttcaattt tcattaaaca aaggactaca gcccttttat ctattaacag
    43141 ggaatgatct gctattggtg aatgaaacca aagatgccat tattcacacc gcccgtctca
    43201 acggttttga tgaaaaaaaa gaagttgaaa tcaaaaacga tactaactgg gaagaacttt
    43261 tcgaagcagc tcaatcaatg ggattgtttt ttgcacgcca aattatggtg ctgaattttc
    43321 cggattcccc cacagcgaca cagtttaaaa aactggctga gctttgtgcc tttattcata
    43381 gtgatttgct ctttatcctg cacttaccta aattttccaa aacaatggaa aaacaggctt
    43441 ggttcacgca aattgagcta aatctcgtgc aaattaactg ccaaacaccg gaacttagca
    43501 aacttccaca atgggtcagt catcgagcaa aagcgatgaa tttgcaaatt gaaaatgaag
    43561 caaaccaact cctttgttat agctacgaag gcaatctact ggcgcttaaa caggcattac
    43621 aactgctaca actcaatgca actgatggaa aaatcacgct gacaaaagcc caagaagtgg
    43681 ttgaacactc cgcccaattt actccatttc aatggattga tgcattattt gaaggaaaaa
    43741 tccaaagagc tcaacgcatt ttgtaccatc tgcaaaatga agaagtacaa gcggtcgttt
    43801 tattaagaat tgtgcaaaaa gagttgatga ttttactcga aatcactcgc aacccaaccg
    43861 cagtcgtttc cagcgaacaa tcacttttta tcggtaattt acgaacagaa tttgaccgct
    43921 tgaaaatttg gcaaaaccgc agaccttttt acaaccagat cactcaacga ctgacttacc
    43981 aaaaacttta cgccctaatc caacaactgg ctgaattaga gcgtaaggtg aaacaagaat
    44041 ttagcgatga tatttggcaa gaattagagc gtttttccgc tcaatttacc taactaatac
    44101 ttttctaaat cttcgctaaa caactccgct tcttcactgg cgatagagtg cttttctgcc
    44161 gcccaatcgc ctaaatcaat aatttgacaa cgctcgctac aaaacgggcg gtatttactt
    44221 tctttactcc acaccacttc tttttcacaa gtcgggcagt ttacaatagt ttctggcatt
    44281 ctttttcctt ttttgctaat gctaagtatt tataatgtaa ggcttgaacc tgctctttaa
    44341 ttaaaagcaa gccctgttca aatggcaagt tattttcaat cacatcatca gcataactta
    44401 atctttcttc acggctgact tgggctgcca taatattttt aatggtttca attttactgt
    44461 tatcacgttt ggttgctctt tccagttgga tttcaggaga aacatcaaca accaatatac
    44521 gatcacaata ttcggtgagc ttattttcaa ttaaaagcgg cacgacccaa atcacataac
    44581 aagcggtcga ttcttgcaat ttttttacca tttcttctcg aatggcgggg tgaagtaaat
    44641 tattgagcca cgttttttcc tcttcattgt taaacacaat ttggcgaagt ttagtgcgtt
    44701 ctaatgcttt ttcagcggtt aagatctctt caccaaaatg ctctacaatc ttggctaaaa
    44761 gcggtgtacc cggttcaaca acttggcgag ccaccacatc agcatcaatt acctctaccc
    44821 caagagctga aaataaatca gacactgtgg ttttgccact gcctattcca ccggttaagc
    44881 ctacaacgta agtcataaaa attgattcct caaaataaaa acaaaccaat tctagtaatt
    44941 aatccctctg ctttcaagca ttagcaccag caacatcgct gtgctaataa acggaataaa
    45001 cgccaatttt gctaatttct gctttttcat tagccaataa gccaagtaat aaccaatccc
    45061 tagcaggctg gcggttaata tcaataagag cattttttcg agccgaaaga gtggggataa
    45121 cgcaaccaat aacaacatat cgcccgagcc aaatgcctcc tttttaaaca taagctgtga
    45181 aaccaagcca atcaacaggc aaaaagcaag ggtaaaggta aaagtttggt gttggaaatc
    45241 ggctaaactc tcccataaca ccaacaaaaa tataagcacg aggtagcgaa tatccgttag
    45301 gtaatagcac atatccagca gtgataaaaa acagagcaga ataaaaatcg tgccgataat
    45361 agggctttcc gagcagagca taatcaatgg aaaaaggaga aaaaatagat ttgccgatcg
    45421 gggttgtttc ggttgtagca ccgattgagc caaaaactgt tgctcggtta agccaatatt
    45481 cactaatgaa gttgtttctt ggtaaatttg gcgattgact cgaatggcaa atcgagggat
    45541 ctccgctttg agccaaaccg caatgaagag ggaaaacagt attaacatcg ctactccacc
    45601 aaagccccca tatcaaaaat cggtaaatac agcccaacaa taatagtgcc gacaatcacg
    45661 cccattatca acattagcat cggttctaat agctgagaca aaatatcaat ttggtaatct
    45721 aatttttgtt ggtacatctc actaatatgc tcacacattt tcgccacatt gccacttttc
    45781 tccccaacct caagcatttg tgccatctca gcaccaaaca cattcgggtt gatcccttgt
    45841 gaaaatttgt agccttgttg taacaaatta agcatagtgc caatttcttg ctgtaaaatc
    45901 gggtcatcat ttttctcgga taaaaacgac ctcaaggcaa catcaagcgg aatatgagca
    45961 ttcagcatta aggcaatatt ttggctgaaa aagataatgc gagattgctc aataattcgg
    46021 ctaaacagtg gcattttagc ccatagagcc attttccact ttgcgactaa cctgctcttt
    46081 tttgcaaaaa acaggtaaaa aatgaccgct agtagtaacg tgccaagtaa tactgtgcct
    46141 tgctcaatca agcattcgga aagggtaaat aaaatatcgg taatgagggg taaagttttg
    46201 tcttttgagc cataaagttg ggcaaactgc ggtacaatca aaaccaatag cccgatagat
    46261 aaagcgagcg aaatcagcaa cacaatcacc gggtaaaaca ggattttctt cacttttttc
    46321 gccaattttt ccaatttcgc tcggctttca gctaaattag tcagcataat gcccagtttt
    46381 ccgctttgtt cgcccatttt gattagctga atttcctgat tggtcacaaa ttcacccaat
    46441 ttctccaacg attgtgaaaa agcatagcca ctttcaatat gctgaatcag ctcattaagc
    46501 catagataaa ggcggatatt tcggcagttt tgcaacaaca tagataatgc ctgttttaac
    46561 ggcatggcag aattaaccaa caatgcaagc tgtgatagca agctattcac ctcttctttt
    46621 ttcgggtttg ctgaaagcac aaaatttcgg ctaatccgaa tatgctgata accttgtgcc
    46681 agcaaaaggt tttccaacat gtctcgattc gttgccaacc gcttgccccg ctgtttttgc
    46741 ccaaatcggc tctgggcttg ccaatgaaat tcatagattt tcgtcattgc ctaagcaatt
    46801 tctctttttg tggttcaaaa tgaatatctg aggcgttgtg ttgcaaacag aacttaaata
    46861 aattctctaa aatttggata atcggatcgt ttctatccac ttgttccgaa tgagccaatg
    46921 aatacgccgt attctcctca taaatctcac tctgccgact actctgctca ggcgaaaggg
    46981 cattgagtaa aaacttcaat tcatcggagg aaatcaaaac aggctcaatc tgtttgtggt
    47041 agataaacgc aaaaatctca caggcattga gattttgcat atcatcaatc cctagccaaa
    47101 gctgttcttc tgtttcttgc agcggaatgg ctaaatatcg caataaaatc tgcttttcat
    47161 tgcaattttt ctgccactgc tctgctgaaa tctcgatgaa cctttggctg tttaaatccg
    47221 ttaccgaata ctccattttg atttcctcac ctcaaattag ccgtttggtg taacagttgt
    47281 gctacagaaa ttagctggaa ataggctcgt atcattgcca ctacaacttg ccgtccaact
    47341 aatcgtatta tttgagaacg acggtgttaa ggtatagcca taaccattca gagagccttt
    47401 gccggttacc gtaatcacgc cttttgttac cgcaattgag tttaggtatt tagtggtatt
    47461 actactggtt ttattcgcct gaatcccatt cgtgccaccg gagcagttat ccaacccgcc
    47521 actgttgtaa atacagactt caacgtctga tttatacgaa gcagatgctt gtaataactc
    47581 cgataacgcc gccttttggg tgtatgagtt ataggaaggg atcgcaatag tggcaagaat
    47641 ggcaataatc gcaatcacga tcatcaactc aatgagggta aatgcccgat gcagttggcg
    47701 aatgccaagc ggtctaaaat gtacaatttt ttgcatataa attccttata aattgcacca
    47761 acaaattgtg gcgaatcaag tgtgcaaatt ttttgcctgc tttgcgaccg gcaaatttta
    47821 atttttcgac gcagatcgaa aaaataaaat ttttatctgt ttatccatac agttttttgt
    47881 tagaatttgc caaatttact caattaggaa tcaagaatgg caaaagcacc taaaaccgct
    47941 tatgtttgta acgattgcgg ggctgaatat tcccgttgga tggggcaatg taaggaatgt
    48001 aaggcttgga ataccatcag tgaagtgcgg ttgatttcca gcaaagaagc ggcgaaatct
    48061 gaccgcttta gcggctatgc cggtgaaacg tcaggcaaag tacaaacgct gtctgacatc
    48121 agcttgcagg aagtgcctcg ctttagcagt ggctttaacg agctggatcg tgtactcggt
    48181 ggcggcgtag tgccggggtc agcaattctg atcggcggtc acccgggggc ggggaaaagt
    48241 acgttattac tgcaagtaat gtgcggttta gcccaacatc tgccaacgct gtatgtcacc
    48301 ggtgaagagt cgttacaaca agttgcaatg cgggcaaatc acttaggctt accaacggca
    48361 aatctgaaaa tgttgtctga aacctctgtc gagcatattt gcaatattgc agatcaagaa
    48421 aagcccaaaa ttatggtgat tgactcgatt caggtgatgc acttgtcgga tattcagtcc
    48481 tcacccggca gtgtttcaca agtgcgtgaa tgtgcatctt tccttacccg ctacgccaaa
    48541 acccgccaag tggcgattat tatggttggg cacgtcacta aagatggcac gcttgccggc
    48601 ccgaaagtgt tggaacacgc catcgatgct tccttgctgt tagaaggcga atccgattcc
    48661 cgtttccgta ctttgcgtag ccagaaaaat cgttttggtg ccgtcaatga attgggcgta
    48721 tttgcgatga ccgaacaagg gctaaaagag gttaaaaacc catctgcgat ttttttaagc
    48781 cgtagcgaag agcaaacgcc gggcagttcg gtgatggtgt tatgggaagg aacacgccca
    48841 ttgttggttg aaattcaagc cttagtcgat cactcaatgc tggcaaaccc tcgccgtgtg
    48901 gcggttggct tagatcataa ccgtttatcg ctattacttg cggtgctaca ccgacacggt
    48961 ggcttgcaga tgtcggatca agatgtgttt gtaaatgtgg tcggtggggt gaaagtcacg
    49021 gaaaccagtg ccgatttagc cttaattttg gcgttaattt ccagcttccg taaccgtcca
    49081 ttgccgcaag atttggtgat ttttggggaa gtcggcttag caggggaaat ccgcccggtt
    49141 accagtgggc aagagcggat cagcgaagcc gcaaaacacg gctttaaacg agcgataatt
    49201 cctcacggca atgtcccgaa aaaggcaatt aaagatatgc aggtgttcac cgtgaaaaaa
    49261 ctcagtgatg cgttagatat tctgtataat ctctaaaatc aagaaccgct tgtaagtctg
    49321 tcttacaagc ggtctgtttt aggtaaaaat ttacgaatgt gcggcagttg gtctattgcc
    49381 tttggaaata tagtataaat taatacacac caccaacgca tttaagccgg tgaccggaat
    49441 cgagccaatc agcaaaccat aaacaacgaa acaggcacaa cccagcgaat tcaccacccg
    49501 cagtttaatc acatctttta ataaaaaaga acaggcaact aaaatcatcg ccacatagcc
    49561 gagtatttca acatagtcca tttagaacct cctcaaataa aataaactgc cgatatttta
    49621 aaggctgttt ttttatttgt atctagctct aaaaatagca aaggtttgcg ttcacatttt
    49681 tacttttaac cgcttagtta ttaaacagat tttcgttcta aacacataaa acggcaacgg
    49741 aaagggttat tttcatcaat ttctgaccac ttttcttcta ctaacgccca attttgttca
    49801 tcaaattcaa agaacgtatc cccttcaatg tctgcttgaa tctcagttaa ataaagtctt
    49861 tctgctagtg gtaaggcttg cttaaacagt tcccccccac caataatcat tatttcagct
    49921 gtatttgcaa aatttttcgc taattcaacc gcttgttcga gcgattgtac cgcataagcc
    49981 ccttccaccg taaaacctga acgggaaaga ataatattag ggcgttttgg caataacctg
    50041 ccgatagatt cataggtttt ccgccccata atcaccggtt tgccgagcgt gttttggcga
    50101 aaccaggcta aatctaccgg caaatgccac ggcatttggt tatctttgcc aatcaccttg
    50161 ttgattgttc gggcaacaat aatgctgatt ttcatttttt ctcctgttat gcaaattggt
    50221 ttgattttat atcaaattaa gcgtgatttt acaccctaaa agtgatactt ttggcaacat
    50281 tatttttagt tacaagtgaa cagattatgt caaaaactat cgtgataaaa tttggcacca
    50341 gcactctcac acacggcact aaaagtttaa gccgtcctta tatgttagag ctggtaaagc
    50401 tcaattacac caacagcatc gtgtgattgt ggtgacatcc ggagctgccg ctgccggtcg
    50461 ggactattta ggacaccctg aactccctaa aaccttagcc tctaagcaaa tgttagcagc
    50521 ggtcgggcaa agtcagctca ttcgagtgtg ggaaaattta ttcgatattt ataatatcca
    50581 tatcgggcag atgctcttaa cccgagccga tctggacgat cgtgaacgtt tcctcaatgc
    50641 ccgtgatacc cttgatgccc tgcttgcaca aaaaatcatt ccggtgatta atgaaaacga
    50701 tgccgttgct accgaagaat ttaaagtagg cgataacgat aatttatcgg ctttagttgc
    50761 gattttggct caagcagatc agctctattt attaaccgac caagaaggct tattcagtgc
    50821 cgatcctcgc tcaaaccctg atgctaaatt gctctcggtg gtggaaaaaa tcacgcctga
    50881 aatccgccaa attgccggtg gtagttcaac cggtttaggc acgggcggaa tgagtaccaa
    50941 aattactgct gctgatattg ctacccgctc cggtgtggaa accatcatcg cctccggttc
    51001 tcgcccaaat gtgttagttg atttagcaaa cgggcaaaac atcggcagta aatttttagt
    51061 ccaatctgac cgcttggaag gcagaaaacg ctggttattt gctgctccgc aagtgggtga
    51121 aattgtggta gatttcgggg cggaacaagc cttgcttcaa cataaatcat tactgccggt
    51181 gggagtttct gccatcaaag gcgaatttac tcgaggtgaa gtaatcaaaa ttttcagcca
    51241 agacggcaaa gccttagcac tcggcattgc ccgttatagc agtgaggcat tgctgcgaat
    51301 taaaggtaag aaatcaaaag aaattgaatc gctccttggt tatgaatttg gttctgttgc
    51361 agtgcatagt gacgaaatgg tggtgtatta atggaattgg gaattgatgt tttagcaatc
    51421 ttgtttgccg ttgcgaccct tgccggcttt atcgatgcca tcgctggcgg cggtggctta
    51481 ctcactattc ctgcattaat ggcagcaggg cttcctccgg caatggcact tggcacgaat
    51541 aaattacagg cgtgtggcgg atcactctct tcctcactct attttattcg caaaaaagct
    51601 gttaatttaa aacaaatttg gttgctaatt ctatgcactt ttttaggctc tgccgccggt
    51661 actatttttg tgcaaatgat caatgtcgat ttcttaaaaa cattgttgcc tttcttaatt
    51721 ctgattatcg gcatctattt tttggtcagc cctaaaattg gcgatgaaga tcgtaaacaa
    51781 cgcattagct ttaccctatt tgcctttacc gccgctgtcg ctctcggttt ttatgatgga
    51841 atgttcggac cggcaaccgg ctcttttatg actctggcat ttattttgct gctcggcttc
    51901 aacctctcta aagccgtagc acacgccaaa gtgattaatt ttacctccaa ctttgcctca
    51961 ttaattttct ttacgcttgg tggtgcggta atgtggaaaa tcggcttaat tatgatggtc
    52021 gggcaattta ttggcggcac actaggtgcg aaaatggtga tgacaaaagg caaaaaatta
    52081 atccgtccga tgctagtgac tatgtctttt atgatggtcg gcaaaatgct ctacgagcaa
    52141 ggaattttta attaacaatg aataaagcaa aacgtattga gattttaacc cgtttacgca
    52201 atgaaaatcc aaaaccgaca actgaactca attacagtaa tccgtttgaa ttattaattg
    52261 ccgtgattct atccgcccaa gcgaccgata aaggcgtaaa taaagccacc gataagctct
    52321 tccctgtcgc caacacgcca caagcgattt tagatttagg cgtagatggg ctaaaagagt
    52381 acatcaaaac tatcggctta tttaacagca aggcagaaaa tattatcaag acctgccgag
    52441 atctgatcga aaaacataac ggcgaagtgc ctgaagacag agatgccctc gaagcccttg
    52501 ccggtgttgg cagaaaaacc gccaatgtgg tgatgaatac cgcattcgga caccctacga
    52561 ttgcagtcga tacccatatt ttcagggtgt cgaaccgcac gaacttcgct cccggcaaaa
    52621 atgtagttca ggtagaagaa aaactgctca aagttgtgcc ggacgaattt aaagtcgatg
    52681 ttcaccattg gttgatttta cacggacgct acacttgcat tgcccgtaag cctcgttgtg
    52741 gttcttgtat tattgaagat ttatgtgagt ttaaagagaa gacggaataa cattatctgg
    52801 tggtatttaa tgaataactc ccctctttag aaaagtaggg gctgggggag atttgatact
    52861 atttcaacat ttcgtatgag cgtatagaaa ttctgccaaa tcttccctat cccctctttg
    52921 ctaaagaggg gaactagatc gagcgtaaaa tataacaagc ggtcattttt ttgagatttt
    52981 ttgcaaatgg atatttattt agtcggtgga gcagtgcggg atcaacttct tgggctgcca
    53041 gtgaaagata gagatttttt agtggttggc gcaactgccg aacaactttt agcccaagga
    53101 tttcaacaag ttggggcaga ttttccggtg tttttacacc ctgaaaccaa agaagaatat
    53161 gcccttgctc gccaagaacg caagaacggc aatggttaca acggctttat ttgcgatttc
    53221 tccccaaacg tcacgcttga gcaagatttg atccgccgag atttaaccat taacgccatc
    53281 gcccaagatg aaaacagcac actttttgat ccttatggcg gtgtgcaaga tttagaaaat
    53341 cggctactcc gccacgtttc tcctgcattc agcgaagatc cgctacgggt gctacgggtt
    53401 gcccgctttg ccgcccgttt tcattcattt ggttttacca ttgctcctga aaccctgaaa
    53461 ttaatgcgag agatggtaca aagcggtgaa ttgaaacatt taaccgctga acgtgtgtgg
    53521 ttggaaacac agaaagcctt tgaaaccgat aatccgcacg tttattttga cattttacgc
    53581 ttaattgggg cattaaaagt gctattccct gaactggatc gtctgtttgg cgtaccacaa
    53641 ccacctcaac accaccctga aattgactcc ggcaaacaca ctctaatggt gctacaacag
    53701 gcaaaaagac ttgcaaaaaa agcggaaaat ccgaccgctt tactctttgc agccctttgc
    53761 cacgacttag gcaaaggctt aacgcctgct gatattttgc ctcatcacta cggacacgaa
    53821 gtcaaaggca ttcaaccaac ccgagagtta gccaatcggt taaaaatccc aactgagatt
    53881 aaagattttg cccttttagt gaccgaatac cacacgcatt gccataaaat ggcggaactt
    53941 cgccctgaaa cggtaataaa actgtttaac agcctagatg tgtggcgtaa accaaaccgc
    54001 ttttttgatt tcctgttcgc ctgtgaagcg gatgctagag ggcgattagg ttttgaacag
    54061 cggaattacc cccaacctga attggcgaaa aaatattacc aagccgcaat cgaaattgat
    54121 gtgcagcaag ttattcaaga cggttttgaa aaacaagcaa ttcgggaaga gctgaataaa
    54181 cgcagagtgt atgcggtaag aagcatcaag ctagatagcg acctaataaa ccattaggtt
    54241 atccgccact ttctcaaaat caattcccaa agttcaagtt ggttaaatgt atggattctt
    54301 taaaaggtgg cgttatttta gtgaatttat aatgttccta tgctcttgat tgttgtagcc
    54361 acaatttcag ggtaaagatc agcaataacc caatgccgaa attggcaata gtgaagccgg
    54421 ctaacccaat aaaagataaa ggttcaaatt gataaaattc aatcgcacct cttgccattg
    54481 cagctaaacc aaatgaaaat gcccagaaac ccatcgagaa gccattttca gctatccatt
    54541 tgaggtttcg taaaataaaa cagaattgta agaatccata tccccataac atttttgcca
    54601 acaagtctaa ttctccaccc atagaaaaat aggcagaagc gcccacaaat gccggagcaa
    54661 gaacaattcc taaagatggt ctagcaatcg gaaaaagcgg actaagccga attctttgta
    54721 acatagtggg ttcatatact aaccaggaaa ttatgccaat gcctaaaaat aaagatgcaa
    54781 tttcactgta gccaattaag cttaatgaac ttgccatagt gaagctccct gcaattggcg
    54841 gtaggtaatg taccgggtgt agcgtttccg gcaaaaattg tgtgcctttc cataatccac
    54901 caataataaa aaccaagaaa attaaatgca caatgacgcc taaaaaaatc aatagttcgc
    54961 ctaaataaaa atcccataca tagagcacat caccgcttat catggttgtc attgtcacta
    55021 aggaaaataa acaacattgc actgggtgca taaattctgc tttaatctgc tcaaaacaaa
    55081 aaaacacacg atacacataa cagcctaata aggctaccca aagtatgact gacgttccag
    55141 caatgatatt accaattgtt gtagcataag gagtgatagg cgttgcattt aaccaggcaa
    55201 ggcctaacgc ccccagccct aatggcattg caaaaaagcc tgtagttatt ggaaaaggtt
    55261 tagattcact cataaattta tcctcatatt gaaataatgc ataactgtat tcggctttat
    55321 aacagtcata tgtaaaaaat tttatttttc taaccgcttg taataagaaa aacctaaagc
    55381 acttgcttta ggttcctact actattcata ctcttctagc cagatagtta aaatcgcttc
    55441 aagaatatgt tcatttgatg cttccggatc atcatcgaaa tcttccattt cacaaatcca
    55501 tttatgcata tctgtaaaac gaaccgtggt cgggtctaaa tccgggttca tatcatacag
    55561 attttcagcg atcattcggg tatctgtcca tttcattagt gcgctgcctc atttgcgtga
    55621 tttaaattat attttggaat ttcaacaacc aaatcttctt caccaacaat acattggcaa
    55681 cttaaacggc tgtctatttc caatccccaa gctttatcca gcatatcttc ttcttgatct
    55741 gaagtatcat ttaacgaatc aaaaccctca cgaattacca cgtggcaagt ggtacaagca
    55801 caagaacagt cgcaagcgtg atgaatttca acgcctgctt cgtgtgctac ttctaataaa
    55861 ttatctccgg ctttagcttc aacaaccata ccttccgggc aaaattcttc gtgtggaaga
    55921 aaaacaattt ttggcatttt aaagtttcct tattactaat cccattcaat attatccaga
    55981 tgttcgccga tgaagtttaa aatctcttcc tcattttcaa ccagataaac aataatcttc
    56041 tttaattccc ttgctttctc tttacttttc tcggaaagcg gataggtaac ataataacat
    56101 cctacgtccg gatcttcttc taataactct aataggcttg gacgataaat actaagataa
    56161 gcccgtaaaa atgcagccca gttataaccg ttcatatagg caacatcata ttcagtatta
    56221 atccgctcgc ccaactcaaa aatgcggtta tcctctaaat cgaattcaac cgcaacggtt
    56281 ctgaattgtt ctgaaatctc ggtttttaca tagttagaca tactgcctcc ttatgctaaa
    56341 tcgtccattt ttttaccggc taatgctttt tgaattgata aattcatacg ccgtgctgca
    56401 aattcttgcg tagctaaatc cacctctttg ataccttgct gaattgcaaa gcgatcagta
    56461 ccttctttta attcgattaa acgggctaat tgtgcttcaa tcgcttggaa ctcctccaca
    56521 ctcaacactg cagagccatc ttctttcaat gccgttacca cgctgtcaat cactcggtcg
    56581 gcttctactc gctgttcaac taactggcgg gcttccatat cttctttggc atttgccatt
    56641 gaggatttaa tcatctgcgt aacttcttca tcggttaagc cataagacgg tttgatttga
    56701 attgaagcct gcactttggt cgatttttcc attgcagtca cgtttaataa accgtctgca
    56761 tcaacttggt aagttacccg aacctgtgca acccctgctg ccattgccgg aatgccacgc
    56821 aaagtgattt taccgagaga gcgacaatct tcgactaatt cacgctcacc ttgtaaaacg
    56881 tggattgtca tcgccgtttg accgtcttta ccggtagtaa actcttgagc tcgagctact
    56941 gggatagtag tgttgcgtgg aataattttc tccaccaaac cacccatcgt ttcaatacca
    57001 agcgaaagtg gcacaacatc aagcaacaac atatcggaat ccggtttgtt tccaactaaa
    57061 atatccgcct gcactgccgc accaatggca acaactttat ccgggtcgat agaggttaat
    57121 ggcgttttac cgaaaaactc gccgacttgt tcacgcacaa acggtacacg ggtcgaaccg
    57181 cctaccatta ccacttcacg aacctcttct gcttcaactc cggcatcttt caaggctcgg
    57241 cgacaagtca tcagcgagcg ttttacaagc ggttgaatta gctcattaaa ttgcgaacgg
    57301 cttactacgc ctgtccaatt tgcaaatttc acttcaaatt caaccgcttg cgaaagtgcg
    57361 actttggttt gagttgccaa agttaataat tcacgctgct cgcttgccgt ttgaggtttg
    57421 taatttgcct gttcagcaat ccattccgct aataggtggt cgaaatcatc gccaccgagt
    57481 gcggtatcac ctgcggttgc taatacttca aacacacctt tgcgtaaacg caaaatagat
    57541 aaatcgaaag taccgccacc taaatcgtaa acggcaatca caccttcttg tccgctttct
    57601 aaaccataag caatcgctgc tgccgttggt tcattgagca aacgtaatac atttaaaccc
    57661 gcaagacgtg cggcatcttt ggtactttgg cgttgtgcgt catcaaaata agccggtacg
    57721 gtaattacca cgcctgaaag ctcaccggct aaacgctttt cggcaaattg tgccaagtgg
    57781 cttaaaatat ccgccgaaac ttcaatcggg cttttattac cttgcgctgt ttggattaaa
    57841 ggtaaaccgt tttcgctcgc gacaaattga taaggtaaat tttgataacg ttgctgaaca
    57901 tctgccagag aacgcccaat gagacgttta gctgaaatga cggtattttt cgggtcaagt
    57961 gcagctttgg caaaggcttc aatcccaact gttttttctg tttccgcata atgcactact
    58021 gacggcacta atgctctttc ttgttcatca agcaatacct gagtctgccc gctacgcaca
    58081 gttgccacta atgaattggt tgtacctaga tcaattccta ccgctaattt atgttgatgt
    58141 ggtgcagcgg tttgaccggg ttcagaaatt tgtaataatg ccatttattt atctctttat
    58201 ctttctaact tagttctcta ttgtattaaa tggagtgaaa tatattgttt aagagaagct
    58261 gga
//
LOCUS       DANLXO010000002        55439 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.002, whole genome shotgun sequence.
ACCESSION   DANLXO010000002 DANLXO010000000
VERSION     DANLXO010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 55439)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 55439)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..55439
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.002"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            133..345
                     /locus_tag="PXD69_000063"
     CDS             133..345
                     /locus_tag="PXD69_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDL6282317.1"
                     /translation="MSAITGTVKWFNATKGFGFITPDQGGKDVFVHFSAIEANGGYRT
                     LEDGAKVQFEIQDSERGASAVNVKTI"
     gene            complement(405..1559)
                     /locus_tag="PXD69_000064"
     CDS             complement(405..1559)
                     /locus_tag="PXD69_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HDL6282318.1"
                     /translation="MMKVSPFQWAAFNYFGFFCAYGVLLPFLPVWLKHHGYSTEMIGL
                     FAAVGYLFRFAGSMLASQRVKTVSQLIPTARSLTWLNIAAAAALLFSGDFIWLLFPVL
                     MLFQMFNSGAMPIADSIASIWQHQIGLDYGRARLFGSMAFVVGSLSAGYLIGLLGENS
                     VVWIIIGFLVFLGIGQLATPKVGFEEQGNKANTSSVTYRQLLKEPETLKMLIAVSLIS
                     ASHAAYYTYSTIHWSNASISTAMTSLFWGLAVVAEILFFLVSKRLFKSWKISHLMILA
                     AVFAVIRWAIMGSTTEIVLIIVMQMLHSITFGAAHIAMIRYISMQSAERVTKLQGLYF
                     GLASCAFMAVFTFIAGMVYQHSPSLTFWLMAIFTLPAIFIVPKRFEVQIN"
     gene            complement(1556..2374)
                     /locus_tag="PXD69_000065"
     CDS             complement(1556..2374)
                     /locus_tag="PXD69_000065"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDL6282319.1"
                     /translation="MNEKKLAFIGTGNMAYAIIQGLLKSGYSAEQIIACNKSNLARRE
                     ELQAVGIATNFANREAVEQADVIVLAVKPQMMAQVCAEFADVDFSNKWVISVAAGISV
                     QRLETLLPSAKNIIRTMPNTPSLISEGMTGLFAKKSVNPTACQFAEQLMSAVGKCYWV
                     ETEEQINHIIAITGSSPAYFFRFMEAMQQSAVQMGFSEQDARTLVQSVALGAAKLVEA
                     NPTTPLSTLRENVTSKGGTTAKALEVFEQHDLAKTVDDAMWAAIHRAREMEQSL"
     gene            2451..3359
                     /gene="rdgC"
                     /locus_tag="PXD69_000066"
     CDS             2451..3359
                     /gene="rdgC"
                     /locus_tag="PXD69_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HDL6282320.1"
                     /translation="MVWFKNVMIYKLTGELALESNSLNELQQETRFTPCSQHDMSKFG
                     WATPLTGSDLLHFSQANQFLLISHKEDKLLPANVVKAETEQRIAELEEKEARKLKKTE
                     KQAVKDQVVSALLPRAFSKHQFTALWLDLDNQLVYVDAASSKRAEDTLALLRKTLGSL
                     PVVPISFTLPPAEVMTNWIAKGHTPSWLNLLEEAELKSFDTDSIIRCKRQDLETEEIA
                     RHLQAGKFITKLAIEWEGHFNCVLNEDATLSRLKFADEVREKNDDILKEDVAQRFDAD
                     FLLMTEELKLFTEKMIAEFGGIKSRI"
     gene            3380..3985
                     /locus_tag="PXD69_000067"
     CDS             3380..3985
                     /locus_tag="PXD69_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HDL6282321.1"
                     /translation="MLDQTIIDQYDALIFDMDGTLIDTMPSHAKAWEKVGEVLGYPIN
                     PKPMYELSGSTTFVIAREIMQRSNIPEHYFEQVVQLKREFGIEMVLANATLLPAFEII
                     KANVGKKPMAIGTGSHRAMVELLDQKFNLRQYVSVIVDSDDVSNHKPAPETFLKCAEK
                     LGIAPHRCLVFEDADLGVQAALNGNMNVFDVRTNTITHSTR"
     gene            4001..4787
                     /locus_tag="PXD69_000068"
                     /pseudo
     CDS             4001..4787
                     /locus_tag="PXD69_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250864.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
     gene            4791..5933
                     /gene="argE"
                     /locus_tag="PXD69_000069"
     CDS             4791..5933
                     /gene="argE"
                     /locus_tag="PXD69_000069"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDL6282322.1"
                     /translation="MKQIPFIQRYAQLIELPTISSLVAEEDLSNRRLIELLATWLADF
                     GFKTEILAVEGSRNKYNLLATYGEGEGGLLLAGHTDTVPFDEGKWRFNPFQLTEKAGK
                     LYGLGTADMKGFFAFVVEVVSQLDLTQIKKPIRILATADEETTMLGARTFAQHSHIRP
                     DCAIIGEPTSLKPIRAHKGHIGESVRITGRSGHSSDPAKGINAIELMHQSIGYLMKMR
                     DELREKYHNPLFQVTHPTMNFGNIHGGDAINRICACCELQFDMRPLPNMAVQDLYAMV
                     NEHLKPMLEQYGDLIEIRHLHDGIPGYECEHSAQIVQVVEKLLGEKCDAVNYCTEAPF
                     IQQLCPTLVLGPGSIEQAHQPDEFLEMKYIEPTKELLTKLIYHFCG"
     gene            complement(6080..6367)
                     /locus_tag="PXD69_000070"
     CDS             complement(6080..6367)
                     /locus_tag="PXD69_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6282323.1"
                     /translation="MPKSWELSLTARSNVIEILQSVEDYTGHWLSAVSLWEQLQNKLD
                     LIAFMPTIGRRREDGTLETFCRNYRIVYEIHLEKVYIITIIHSRRLYPRPS"
     gene            complement(6360..6551)
                     /locus_tag="PXD69_000071"
     CDS             complement(6360..6551)
                     /locus_tag="PXD69_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282324.1"
                     /translation="MLFKEQGYDEFLAEQIKAGQEAIARGETFTKEQINNELNHLFAD
                     MQKRQQLRENENLFEVNYA"
     gene            complement(6841..7431)
                     /gene="yraP"
                     /locus_tag="PXD69_000072"
     CDS             complement(6841..7431)
                     /gene="yraP"
                     /locus_tag="PXD69_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HDL6282325.1"
                     /translation="MNKLANKLLKGSLLVLGFISLQGCITTAVVTSAAVATKVATDPR
                     TTGTQVDDEILEEKVAYNINKDEQIKQEARINVVAYNGKVLLIGQAPSMDVVENAKNL
                     AAGAEGVTEIYNEIRQGEKIGFGQITQDSWITTQVKSKLLVNSEVKATEVKVVTENGE
                     VFLMGKVSQNQADAAAEAARNVGGVTKVVKVFSYAQ"
     gene            complement(7441..8025)
                     /locus_tag="PXD69_000073"
     CDS             complement(7441..8025)
                     /locus_tag="PXD69_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDL6282326.1"
                     /translation="MLNKIQDRFTESIQTQISASELLPAKLSEAANRIVACLLRGDKV
                     IVCGHGRSYGNAELLVSHLLHRYELARPSFAAVQLQLSGVLAGVVAQDNELEAVYKKQ
                     LQAVAKEGDLFIVFSPVGNEECILQAIHTAKNQHLDLDIIALTGSNNDHTLGLLDESD
                     IEISAPSTNQLRVIESHHFYVNLLCELIDHLLFS"
     gene            complement(8031..8402)
                     /locus_tag="PXD69_000074"
     CDS             complement(8031..8402)
                     /locus_tag="PXD69_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDL6282327.1"
                     /translation="MELFNKLINKREQGSFYEQKARVFLEQQGLRFVAANQAFKGGEL
                     DPIMQDGQTVVFVEVRQRKSNRFGSAVESIDYRKQQKWQNAANMWLLKQNQSLETANC
                     RFDVVAFEGNQTPVWIPNFLG"
     gene            complement(8377..10098)
                     /locus_tag="PXD69_000075"
     CDS             complement(8377..10098)
                     /locus_tag="PXD69_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HDL6282328.1"
                     /translation="MATILNHTMKKALVPTAIALFISACTSVNPVTESIKNEAYSSSE
                     FYINKADQTKEAEDKISYQLLAVRKLIDENKEYEAQNTFSEILTAEMNEVQKLEYALV
                     SAQLAALQGKNEQATSQLKAIQDPLLSSAQRLRYIQTQARIAANQKDVIGIVRARSQL
                     NNFYKMNRERQENNDIIWQTLRDANRGMLEKTVPEAGEMELAGWLALINIYNQNVTTP
                     AQMPQAINNWKAQYPSHSAVAVMPTELQGVSNFQQTQLNSVALLLPLSGDAKILGDII
                     KRGFNDAKADDSTAVQTFDTDSSDVNSLISQAKQQGANVIVGPLLKSRVDEMLLSPEI
                     QNVNILALNATENVRNIAQVCYYGLSPESEAQSGAEKIYQDGNSVAIVAAPQDDYGNR
                     SAEAFAKRWRQLTNSDADVRYYNQPLDAVAAIQNAGVSKAALYILGNAEQVLEIKQGI
                     DSSTLKDRLAIYTSSRSNSPNNGIDFYTSMEGVKFSEVPLLADQSSSEYKKAENLANS
                     DFSMMRLYAMGADAWSLATKFNEFRHIPGYKISGLTGELKAGQHCNIERSLSWMQYRN
                     GAIQQAY"
     gene            10172..11044
                     /gene="rsmI"
                     /locus_tag="PXD69_000076"
     CDS             10172..11044
                     /gene="rsmI"
                     /locus_tag="PXD69_000076"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDL6282329.1"
                     /translation="MKNRQNSSGINPNYGILYIVATPIGNLGDITQRALDTLSSVDLV
                     AAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAVVLVEKLAKGENIALISDAGTPLIS
                     DPGFHLVRHCRQAGVKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKTKSRCDKLT
                     ELENEPRTLIFYESTHRILDTLADMQTVFGEDRYVVMAREITKTWETIYGDQLGNLIE
                     WLNEDSNRIKGEIVLVVEGKPQSSEEAFSSQAIKLLTLLCQELPLKKAAAIVAETFGY
                     KKNALYQYGLEHFE"
     gene            complement(11289..12455)
                     /locus_tag="PXD69_000077"
     CDS             complement(11289..12455)
                     /locus_tag="PXD69_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6282330.1"
                     /translation="MTNLLLAIIYLSFISLGLPDAILGSAWPSMHQQLAVPLSYAGVV
                     SMIMSIGTITSSLMSDKLTYHLGTGKVMVISVALTALALWGFSISDAFWILCLWAIPY
                     GLGAGAVDAALNNYVAVHYASRHMSWLHCMWGVGASIGPHILGYALLQGRGWEAGYFT
                     ISMLQIGLTLMLFCSLPFWKLRKQITAEINHSAKPMSLKETLKIPGVKYGILAFFGYC
                     GVEQTAGLWASSYFVMVKDVGLEQAAAFGSIFFIGITVGRGVSGFLTLKFSNRQMIKL
                     GSALILVGIAILCLPLGKYVTLASLIIIGLGCAPIFPCLIHSTPAFFGEDKSQSVIGV
                     QMASAYIGVLLLPPIFGFIANAISIQLLPLYLLLMFAIMAYAYRNLVRETSPSP"
     gene            complement(12607..14121)
                     /gene="putP"
                     /locus_tag="PXD69_000078"
     CDS             complement(12607..14121)
                     /gene="putP"
                     /locus_tag="PXD69_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDL6282331.1"
                     /translation="MFGLDPTTIMFVVYILGMIAIGFIAYRVTNNLSDYILGGRRLGS
                     FVTALSAGASDMSGWLLMGLPGAVYAGGLIEGWIAIGLTIGAYLNWKLVAGRLRSHTE
                     HSGDALTLPEYFHNRFGDKTRLIKILSAVIFLLFFAIYCASGVVAGARVFENLFGLPY
                     HQAIWYGAVATILYTFIGGFLAVSWTDTIQASLMVFALILTPFFVMYNLGGFDEMQAL
                     IDRAGEMAQKDYNDIFTGTSVLGIISLMAWGLGYFGQPHIVVRFMAAESVKSLENARR
                     ISMTWMIICLLGAIGIGYFGMAYFFGNPEQVGNISKNPEQIFIELAKLLFNPWVAGIL
                     LSAILAAVMSTLSAQLLICSSAITEDLYKGILRPQASDKELVWLSRLMVLAVAALAIY
                     IAQDPDSKVFGLVRNAWAGFGSAFGPVVLLSLFWKRMNGFGAIAGMLTGALIVHFWGD
                     ITLKLALPEIYSMIPGFIAATLMIIVVSLITPMPSKAVLDTFDRANKAYLAEVK"
     gene            complement(14215..15003)
                     /locus_tag="PXD69_000079"
     CDS             complement(14215..15003)
                     /locus_tag="PXD69_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDL6282332.1"
                     /translation="MNAKKEKESSGNQSLIRGLTLLELLAKFPNGCPLAHLAELSGLN
                     KSTVHRLLQGLQQEGYVRPAPTAGSYRLTTKCLAIGQRALSSINILHIAAPHLEALNL
                     TLGETVNFAMRENDHAILINKLEATTGMMRTRAYIGQQMQLYCSGMGKLFLAYGSADY
                     IPQYWQTKSDIIQKLTVNTITTIDGMQTELETIRRQGFAMDNEENELGVSCIACPIFD
                     HQQKVHYAISVSLSTARLNQLGRENLLPAIQETAEKISAELGGR"
     gene            complement(15000..15578)
                     /locus_tag="PXD69_000080"
     CDS             complement(15000..15578)
                     /locus_tag="PXD69_000080"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDL6282333.1"
                     /translation="MNQSSLTDLRSQLRQSMRLKRQSLTAGQQTQAAESIIPQALSLI
                     ESYQVSHIAFYLPFNGEISPIPLMEQLLQQGKKLYLPLLHPFTSGQLLFVNYNCKTIL
                     KFNRLGIQEPILDVRNILPLQELEMIFTPLVACDKAGNRLGMGGGFYDRTLAQAPHLI
                     SVGLAHECQQVEQLPIESWDMPLDHIILGAAK"
     gene            complement(15580..15771)
                     /gene="ssrS"
                     /locus_tag="PXD69_000081"
     ncRNA           complement(15580..15771)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="PXD69_000081"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(15876..16166)
                     /locus_tag="PXD69_000082"
     CDS             complement(15876..16166)
                     /locus_tag="PXD69_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDL6282334.1"
                     /translation="MSANNIELQIFGQVLRLQCPVEQQEHLLASAQRLEERVVVLKEQ
                     SGIIQLEKVLAIVALNLNYELEQAQRQNAENKNVLVACIEQLDNSLGKFQSN"
     gene            16245..16802
                     /locus_tag="PXD69_000083"
     CDS             16245..16802
                     /locus_tag="PXD69_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HDL6282335.1"
                     /translation="MAITDSQQFKQLVSQLQIDDTPAEFHGFLCGLIAGGIQDESWKT
                     LTYQFTNDGHAFSIEPLNTLTDFYQQLSESFSEANTLFSLWLPQNEEDGFALADGISE
                     WTNSFLLGLGVAQPKLQQETDEVGEAIDDLDEIAKLGYSDDDNNEELLEAGEEVLEYL
                     RVLALFLHSHFALGVPKTEEKPPLH"
     gene            16900..17964
                     /gene="hemE"
                     /locus_tag="PXD69_000084"
     CDS             16900..17964
                     /gene="hemE"
                     /locus_tag="PXD69_000084"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDL6282336.1"
                     /translation="MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAG
                     DFMSLCRNADLACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARP
                     VASLNDVNQLPIPDPEDELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTKIKKMLYAEPHILHKLLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHED
                     YKAFSLHYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTVDIA
                     DARRRIGDKVALQGNMDPSVLYASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVP
                     VESPKVFVDAIHNYSKQYHK"
     gene            18111..18701
                     /locus_tag="PXD69_000085"
     CDS             18111..18701
                     /locus_tag="PXD69_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF416 family protein"
                     /protein_id="HDL6282337.1"
                     /translation="MRNPIHKRMERFEPWQNTTFMACLCERMYPNYQLFCEVTEQPEK
                     AKVFQNILNLVWEYLTIKGAKINFDNQLEKLEEIIPDVNEYAFFGVLPAQEACEALSE
                     LLHSIIAGSTLEQAIRISQISLGTVASYLEMQQDKELNEQELKNSEEIQEELDVQWQI
                     YRLLNECEKRDLDLIFELKDEIRSSGISNIGLNINQ"
     gene            18837..19109
                     /locus_tag="PXD69_000086"
     CDS             18837..19109
                     /locus_tag="PXD69_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDL6282338.1"
                     /translation="MNKTELIDAIAAGANLTKKDAKAALEATLDAISASLKAGDAVQL
                     IGFGTFKVNERKARTGRNPKTGEEIKIAAAKVPAFVSGKALKDLVK"
     gene            complement(19198..19758)
                     /locus_tag="PXD69_000087"
     CDS             complement(19198..19758)
                     /locus_tag="PXD69_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282339.1"
                     /translation="MKKSFLSLLVLGTTMALAACDQAKEAAQSTTDKAVEVKEAVAEK
                     AAEVKSATEAKVEELKAAANDAAQATADKTEEAKKAVAEKATELKTTTEAKVEELKAA
                     ANDAAQATTDKTEEAKKAVAEKAAELKATTEAKVEELKAAASDATQATADKAEEAKKA
                     VAEKAAEVKVETETKVEEMKKAIESK"
     gene            complement(19904..22846)
                     /gene="rne"
                     /locus_tag="PXD69_000088"
     CDS             complement(19904..22846)
                     /gene="rne"
                     /locus_tag="PXD69_000088"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HDL6282340.1"
                     /translation="MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKG
                     KITRVEPSLEAAFVDYGAERHGFLPLKEISREYFPSDYVFNGRPNIKDIIQEGQEVIV
                     QVSKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLDV
                     PEDVGLIVRTAGVGKSPEELQWDLKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAI
                     RDYLRRDIGEILIDNKKVFEKAKNHIRLVRPDFINRVKLYEGEVPLFSHYQIESQIES
                     AFQREVRLPSGGSIVIDVTEALTAIDINSSRSTRGGDIEETALNTNLEAADEIARQLR
                     LRDLGGLIVIDFIDMTPVRHQREVENRIREATRQDRARIQFARISRFGLLEMSRQRLS
                     PSLSEASSHICPRCQGTGKVRDNESIALSILRLLEEEAIKENTAQVHTIVPVQIASYL
                     LNEKRKAISSIEKRHDVQIVVVPSESMETPHFSVYRLRENEITPTLSYDLTKHYEARH
                     EEEHPHHHHQEDVLVTRNEPVITVESVLQSSELNLQPSPTPTEPPKPSLLSRLIATIK
                     GWFSEEKVEEKPKPKARNQRERRQRRERPNRNAKAENQERKTPQAQTTPAEEKPMRSE
                     KKARRAVVEEVSGVTEQESRSNSREVQTERRQRRDLRKKVRIETQEVEVENLTPAVEE
                     TVAKQVENVQKNQQIQPLATQEVPVETAPEVETTNEGRENNRQRRLPRHLRVGNQRRR
                     ENQRNQVISPMPLTSAVASPELASGKVWVQVTSTVKVEEKASFLSVDQMLEQQENQLV
                     ETEKKSEEKKLHTVSPLGGFVAQATNRDLVKEKQEQLSKPKEEKVASEDVKPVEVKEH
                     IAPFGSVVAQHSERDLVKEKNERVSKFQSQATVAPAIVEEVTNPIEVPKSTYESDYRF
                     NGRLGTFSRVEHTQAAMTIASAPSDKLEVVEISQWQNSKYYFYGKGFGGYTSAVSQVQ
                     SAPRSTNG"
     gene            complement(23303..24148)
                     /locus_tag="PXD69_000089"
     CDS             complement(23303..24148)
                     /locus_tag="PXD69_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDL6282341.1"
                     /translation="MMSQEQFEEINQERRQALNHGSRIAMAASVLGALGIASTANAKQ
                     ASAEKSPYAEPEQYGLKRHGMTIDPKRVALVVVDPQIDFLGPKGVMWGVLGDSIKENN
                     TVANIESLFKAAKAVDMPTFVSPHYYYPTDHKWEFGSPGEHFMHDSGMFARKGQYTME
                     GFENSGADFMPEYKPYIFDGKTVITSPHKIFGPETNDLVLQLRKRKIDQVILAGMAAN
                     LCIDSHLRELIEQGFEVTVVKDATAGPRIPEGDGYLAALTNYRIIANDLWTTEEAVKK
                     MTAKA"
     gene            24275..25099
                     /locus_tag="PXD69_000090"
     CDS             24275..25099
                     /locus_tag="PXD69_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6282342.1"
                     /translation="MDSLTHLFTQFQFRTDLFHLGQLCQIGSFNEENKGYLHFVRQGR
                     FILNQAAERPITIERPAIIFSPTNILHSLHPLDDSGLDIFCINFDFGKGIRNPLTHTL
                     HNIVILELAQYPELGVLADQIFSEVNQKGCGYQAMIHHLCAYFTLKVARQCLEKGYIQ
                     TGLLKGLADKQLGKVLLAIHNAPERDWNVEELANVALMSRSRFAAYFKQTMGVSPMDY
                     LTNWRLAVAQHLLQKGIPVALVAEQVGYSHNAALSRVFMRELGLSPTEWLAQNKES"
     gene            complement(25184..26647)
                     /gene="ubiD"
                     /locus_tag="PXD69_000091"
     CDS             complement(25184..26647)
                     /gene="ubiD"
                     /locus_tag="PXD69_000091"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HDL6282343.1"
                     /translation="MKYKNLREFLDFLESQGELVRIQQEIDPYLEMTEIADRTLRKGG
                     PALLFENPKGYQMSVLCNLFGTPKRVALGMGQEDTKALRELGKLLAFLKEPEPPKGFK
                     DLIGQLPQWKQILNMPPKVLSKADCQQVVISGDEVDLYKLPIMHCWPGDVAPLVTWGL
                     TITQGPYKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWKAENPGKPFLVSVAI
                     GADPATILAAVTPVPDTLSEYAFAGLLRGHKTEVVKSISNELEVPASSEIVLEGYIDL
                     EETALEGPYGDHTGYYNEQEYFPVFTVTHITMRKDAIYHSTYTGRPPDEPAVLGEALN
                     EVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYT
                     KFVIVCDDDVNARDWKDVIWAITTRCDPARDTTLIEHTPIDYLDFASPIAGLGSKMGI
                     DATNKWAGETTREWGTPIEKDDNVVKRIDEIWDSLGI"
     gene            26784..27758
                     /gene="znuA"
                     /locus_tag="PXD69_000092"
     CDS             26784..27758
                     /gene="znuA"
                     /locus_tag="PXD69_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HDL6282344.1"
                     /translation="MFKRTLIGLAVLGASVAQADVLTSIKPLGFIASAITEGVTETKV
                     LLPVTASPHDYSLKPSDVTQLQSAQLVVWVGDGLEGFLEKSIEKLPREKVLTLEDVDA
                     IDDIVDKASKKEDKDDDHDHKHEHKHEHKHEHKHEGHNHEGHNHDHHGHSHDEDWHIW
                     LSSEASELAAEQIAARLSEQMPEHKAKIAENLAKFKANLTAKKAEIAKQLEPVKAKGY
                     YTFHDAYGYFEREYGLNSLGSFTINPTVAPGAKTLTAIKKNIAKNKAQCLFAEPQFTP
                     KVIETLAKETKVNVGQLDPLGAKVQLSATAYPEFLQVLADEFSQCLTK"
     gene            complement(27810..28130)
                     /locus_tag="PXD69_000093"
     CDS             complement(27810..28130)
                     /locus_tag="PXD69_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnA domain-containing protein"
                     /protein_id="HDL6282345.1"
                     /translation="MIYPTCPECKSENTYHDSIQFVCPDCAYEWTGEETDQDDDVLIV
                     KDSNGNLLSDGDDVLLIKDLKLKGSSEVLKKGTKFKGIRLAQGDHNVDCGKIMLKSEF
                     LKKA"
     gene            28271..30634
                     /gene="rnr"
                     /locus_tag="PXD69_000094"
     CDS             28271..30634
                     /gene="rnr"
                     /locus_tag="PXD69_000094"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDL6282346.1"
                     /translation="MIVDPNYQQELEKYENPVPSREFILNTIREHNAPMSRDELLSAF
                     HIDDEERMEGIRRRLRAMENDGELVFTKGKRYALPEKMDLIKGTVIGHRDGYGFLQVE
                     GHEKGATKSEDWFIPNAQMVKVMHGDFVLAQPNGTDRRGRKEVRIVRVLEARKKQIVG
                     RFFLESGIGFVVPDDSRVNQDILIPDEHRMGARMGQVVVVELQERKASFSRPVGIITE
                     ILGDNLAPGMEIEIALRNHDIPHIWPEGVEKQIRQFSSEEVPEEAKQGRVDLRDLPLI
                     TIDGEDARDFDDAVFAKKEGNGWRLWVAIADVSYYVRPKTALDLEALNRGNSVYFPNR
                     VVPMLPEVLSNGLCSLNPQVDRLCLVAEMSVSSKGELQDYQFYEAVMNSHARLTYTKV
                     WKMLEGDEALRERYAPLVPHIEELYAMFQTLMKARHKRGAIEFETIENQFIFNPQGRI
                     ERIEPLIRNDAHKLIEECMILANIAAARFVEKANEPALYRIHDKPSEEKLLSFKSFVR
                     ECGLTWDVGLDPTPKDYGVLLEQIAERADKELIQTMLLRSLKQAVYAADNIGHFGLAL
                     TEYAHFTSPIRRYPDLLLHRAIKYLIEKGKGNTRYYTDGGGYHYKLDDMDEFGDKCSA
                     TERRADEATREVADWLKCEFMQDHLGEEFDGVISSVTGFGLFVKLNELLIDGLVHIST
                     LDNDYYHYDADRQRLIGGSGIIYRLGDAVRVKVINVNLDEKKIDFELLTGNKKTGKTA
                     KKKAKATEVPVFKEPKTVKKAKKVAEKKPAKSAKKRTKTTASKSRKK"
     gene            30638..30904
                     /locus_tag="PXD69_000095"
     CDS             30638..30904
                     /locus_tag="PXD69_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282347.1"
                     /translation="MDYKKQILFSLLFALVIAIISYFLFTYIPFDCSDLSKLNDSQRL
                     ECRTAEFLGVYYWLPHTTTLFFGSVLLYWAVYGMISLVQAVLKR"
     gene            31127..31585
                     /gene="mraZ"
                     /locus_tag="PXD69_000096"
     CDS             31127..31585
                     /gene="mraZ"
                     /locus_tag="PXD69_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDL6282348.1"
                     /translation="MFRGASSISIDSKGRIAIPTRYRAELLEKHHGILVCTVDIRQPC
                     LLLYPLHEWEMVEQKLLALSNFDPVQRRIQRVMQGFATECEMDSAGRILLSPTLRQHA
                     QLEQQIMLVGQLNKFEIWQDKQWQAQIAEDLAFGSSAEILDCEALKNLSL"
     gene            31601..32539
                     /gene="rsmH"
                     /locus_tag="PXD69_000097"
     CDS             31601..32539
                     /gene="rsmH"
                     /locus_tag="PXD69_000097"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDL6282349.1"
                     /translation="MSENPKHITVLLHEAVDGLAIKPNGIYIDGTFGRGGHSRLILSK
                     LGENGRLIATDRDPRAIAEAQTISDPRFQIEHTAFSAIPELCERMGLVGKIDGILLDL
                     GVSSPQLDEAERGFSFMRDGPLDMRMDTTKGLSAAEWLAQVSAEDLAWVLKEFGEERF
                     AKQIAQAVVSYNKSANEKISRTLQLAQIIADAVPFKDKHKHPATRSFQAIRIFINGEL
                     DELEKALNSALTVLAPEGRLSIISFHSLEDRMVKQFVRKHSKGMDVPRGLPILEAELT
                     KNIPLKTIGKAIMPSEAEIEANARSRSAVLRIAEKR"
     gene            32558..32869
                     /gene="ftsL"
                     /locus_tag="PXD69_000098"
     CDS             32558..32869
                     /gene="ftsL"
                     /locus_tag="PXD69_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDL6282350.1"
                     /translation="MSNERYPLHQIIIDDIFSHNKVALLLLIGVVISAVATIWITHQT
                     RLSVSEQGQLIQANQKLESQYTNLQLEENSRSSRARVDAAAKSFGLQPIKKEQEIILV
                     E"
     gene            32873..34933
                     /locus_tag="PXD69_000099"
     CDS             32873..34933
                     /locus_tag="PXD69_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsI"
                     /protein_id="HDL6282351.1"
                     /translation="MVKSVKLKRKQEAPVAKAEPQQAEGKKTPSFLPTRFRVVVFFML
                     LMVGGLLAQTAYIQLFDSERLIKEANNRSLRTKELQFTRGRILDRNGRFLSISVPMYS
                     LTLDPREYFDTKLRRSNESWRALAIEMETSKGKIEANVNKFIEKKNFSKEKVDFDPRS
                     ILNTKSEGYWTQLAQVTGLDYNSLIEKVRNNPSSVFLRLDNENLVRERQKFQALSKEI
                     GRSYNDIMDELYSKNRQRFLYLSRHQSEAISEYAKELDIDALVIKVESRRFYPLAEES
                     SQLIGFTDKDDMHGSEGLERSFDSLLIGKNGKQIIRKDAKGNIVENIRSEKQYDPQDV
                     MLSIDEELQSMVYGEIKKAVQENNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFK
                     PELMRNRAITDTFEPGSTVKPFTVLTALQNGVTYRDEVIGTRPFVVNGHTIKDVAPRD
                     SLTLTGILQKSSNIGVSKLALRMPANALVDTYTKVGFGKDTGLGLGEQRGTNGDRKRW
                     ADIERATLSYGYGLNVTPLQLARAYATLGSFGLYRPLSITKVDPPVIGERVLPEKTTR
                     DVVHMMESVAAKGEGGHRAAVDGYRVAIKTGTIHKLEKGKYVEKYIAYTAGLAPASDP
                     RFALVVLINEPKAGNYYGGFVSAPLFSRIMGYTLKQRNIKPDNLTENTQSAVREIKLE
                     RPIN"
     gene            34942..36432
                     /gene="murE"
                     /locus_tag="PXD69_000100"
     CDS             34942..36432
                     /gene="murE"
                     /locus_tag="PXD69_000100"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDL6282352.1"
                     /translation="MKRLLPFLTELDAWVEELTELKQMTLDSRQVQAGDLFVALKGHQ
                     VDGRKFIPNAIEQGAAIILAEADEDQPEIELDPKFAKFNLDRTACCKVVSVPRLPKLL
                     SEIAGALYHNPSHKLTLAGITGTNGKTTTAQLLAQWHNLLGGKSAVMGTIGNGLYGQV
                     QEAVNTTGSAIEIQHNLANFVELGADFCAMEVSSHGLAQFRAEALDFDLAIFTNLSRD
                     HLDYHNTMEEYAQAKFRLFNELSTKAQVINADDEIGREWLTQLPNAVAVSTDPKFAGN
                     HQFVKATAVKFTLQGASIAFESSWGNGELHSRLIGAFNVNNLLTAFAGLLALGFDIQE
                     LVKTAPNLVGVAGRMECITAPNKPMVIVDYAHTPDALEKALQAARLHCEGELWCIFGC
                     GGDRDAGKRPLMATIAEKLTDKVIATDDNPRTEDNQKIMADIVKGFSKPQQIIHNREE
                     AIKTAIEQAKATDVILIAGKGHEDYQIIGTEKLHFSDQETARKYLF"
     gene            36520..37914
                     /gene="murF"
                     /locus_tag="PXD69_000101"
     CDS             36520..37914
                     /gene="murF"
                     /locus_tag="PXD69_000101"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDL6282353.1"
                     /translation="MIKLTTQQIAEILNAKLIGNGETVVETTSTDTRQAVENGLFFAL
                     KGENFDAHHYLQNAVAQGCVAVVVERECEIDVPQLVVADTRLALGELAKWLKAKLNPK
                     TVAMTGSSGKTTVKEMTAKILQKMTACEQEVLYTFGNLNNDLGVPMTLLRLTEQHKYA
                     VIELGANHIGEIAYTTAIAQPDACLVNNVAAAHLEGFGSLAGVAQAKGEIYRGLKENG
                     KAIVNLAFYYPQWQKEIGSREMQSFSYIGSDSDSYADYWAEDVELHLSGSRFTLHTPQ
                     GEIAIDLPYLGKHNVSNALAATSLAMSVGATLEAVKAGLEQRSMVKGRLYPVQINDHC
                     LFIDDTYNANVDSMKSAISVLENYPAYRIFAVGDMAELGEESSKCHQEVADFAKNAAL
                     DLIVSFGKESAVISQQAEHHFTDKQQMVDFLLPIILQKIEQKQPLVLLAKGSRSQKME
                     TVISELCKPFNLNF"
     gene            37935..39017
                     /gene="mraY"
                     /locus_tag="PXD69_000102"
     CDS             37935..39017
                     /gene="mraY"
                     /locus_tag="PXD69_000102"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDL6282354.1"
                     /translation="MLVWLAELLVQYNTAFNVVSYITFRAIMALLTAMGIGLWIGPKV
                     IRRLQILKFGQEVRNDGPESHFKKRGTPTMGGVMILAAIGVSTLLWADLRNSYVWFTL
                     FVLFGYGAVGFVDDYRKISRKNTDGLIARWKYFWLSAIALVAVFGMYAVGKDTAATQL
                     VVPFFKDVMPQLGLFYIVLSYFVIVGTSNAVNLTDGLDGLAIVPTIMVASAFALIAWA
                     TGNFNFAQYLHIPFIPNAGELVILCTAIVGAGLGFLWYNTYPAQVFMGDVGSLSLGGA
                     LGVIAVLVRQELLLVVMGGVFVVEALSVILQVGSYKLRQKRIFRMAPIHHHFELKGWS
                     EPRVIVRFWIITLMLVLVGLVTLKLR"
     gene            39081..40382
                     /gene="murD"
                     /locus_tag="PXD69_000103"
     CDS             39081..40382
                     /gene="murD"
                     /locus_tag="PXD69_000103"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDL6282355.1"
                     /translation="MQKQYENKTVTIIGLGTTGLSCVDFFKKKNANIQVIDTRANPAG
                     ADKLDVTIPLHTGGLNSEWLLKSDLIVISPGLAVATPEIQQAIQAGVEIVGDVELFCR
                     EAKAPIIAITGSNGKSTVTTLTTEMAKQAGIKVGMGGNIGVPVLSLLEGDYDLFVLEL
                     SSFQLETTYSLKAKAATVLNISEDHMDRYDSIADYRQAKLRIYDNAENIIVNGEDAQT
                     YPIQAVKKVIRFAEQNAEYSLRNQMLYSGDDAIIQTKQMLISGRHNEMNALAAMALAE
                     AANVPREGIVKALQIYGGLPHRFQAVATNDGVRWVNDSKATNVGSTVAALNGLNIAGT
                     LYLLLGGDGKAADFSELKPLINKPNIVCYCFGQDGAALAELSEQSVLVETMQQAIEAI
                     RPQLKKGDMVLLSPACASLDQFKNFEQRGEVFMALAQGQHA"
     gene            40382..41560
                     /gene="ftsW"
                     /locus_tag="PXD69_000104"
     CDS             40382..41560
                     /gene="ftsW"
                     /locus_tag="PXD69_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDL6282356.1"
                     /translation="MLERIKSEWDKWVRLTPSNSLYDRTLIWLFLGLLIIGFVMVTSA
                     SLPVSTRLNNDPFYFAIRDGLYIIASIIFCYVFVQIPIEKWEKHNLALFFISIGFLIA
                     VLIFGRSINGAVRWIPLGILNFQPAELAKLAVICYFASFYVRKYDEIRKEKASFWRPA
                     VILFLFGFLLILQPDLGSTFVLFVLTFSMLFIVGAKIMQFMFLGVVGTVLFAVLILTS
                     EYRLKRVTSFMDPFADAYGDGFQLSNSQMAFGQGEFWGQGLGNSVQKLEYLPEAHTDF
                     VMAVIGEEFGFFGIACIVLLLILLTVRALKISKESLVLEERFKGYMAFGIAIWVFLQG
                     FVNLGVASGLLPTKGLTFPLVSYGGSSLVIMSIAIAVLLRIDHENRAERIGHAKIKTI
                     "
     gene            41679..42734
                     /gene="murG"
                     /locus_tag="PXD69_000105"
     CDS             41679..42734
                     /gene="murG"
                     /locus_tag="PXD69_000105"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDL6282357.1"
                     /translation="MAKKLLVMAGGTGGHVFPAIAVARELQKQGWQIRWLGTKDRMEA
                     TLVPKHGIEIDFIEISGLRGKGVAALLKAPFAIFKAVMQARKIIKNYQPDAVLGMGGY
                     VSGPGGIAAKLCGVPVILHEQNAVAGLTNVWLSKIARKVLQAFPTAFKEAEVVGNPVR
                     EDLSALPLPNERFAKRGYPINILVMGGSQGARVINQTVPEVAKVLGNNVFISHQVGKG
                     NLAGIEEVYQQTGNGIASEFIDDMKAAYEWADLVICRSGALTVCEIAAVGLPAVFVPF
                     QHKDRQQFLNANYLAADGAAVIIEQSDFTPKALQQALEPLIANRQLLLDMSMRARAKS
                     TPMAAKRVAEVIIQEAN"
     gene            42810..44237
                     /gene="murC"
                     /locus_tag="PXD69_000106"
     CDS             42810..44237
                     /gene="murC"
                     /locus_tag="PXD69_000106"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDL6282358.1"
                     /translation="MKNFQDKVKKLVPEMRRVSQIHFIGIGGAGMSGIAEVLLNEGYQ
                     ISGSDIADRAVTQRLSAAGAKVFIGHQAENIAGASVVVVSTAIDETNPEIIAAREARI
                     PVIRRAEMLAEIMRFRHGIAIAGTHGKTTTTAMISMIYTEAKLDPTFVNGGLVKSTGK
                     NAHLGASRYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLR
                     NLPFYGLAVMCADDETVMEIAPRVGRQVITYGFSENADYRIEDYQQTGFQEHYTVVCP
                     SGERIDVLLNVPGMHNALNATAALAVAKEEGIGNEAILAALADFQGAGRRFDQLGSFI
                     RPNGKIMLVDDYGHHPTEVDVTIQAARSGWEGKRVVMIFQPHRYSRTRDLFDEFVQVL
                     SKVDALILLDVYAAGEAPIVGADSKALARSIRNLGKVDPILVSDTDQLGEVLDQIIQD
                     GDLILAQGAGSVSRISRGLAESWKN"
     gene            44327..45238
                     /locus_tag="PXD69_000107"
     CDS             44327..45238
                     /locus_tag="PXD69_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDL6282359.1"
                     /translation="MSIKNEKIAVLFGGVSQEREVSLNSGAAVTAALKSLGYNVEGID
                     TKEFPIEKLKEKGIQRVFNILHGGIGENGVLQGALEQMGIPYTGCGVMASAVTLDKFR
                     TKLLWNAVGLPTADMVVVQRGQAVDFDQIIAKLGLPVFVKSSCEGSSVGVFKVKTKEE
                     LAPAIHEALKFDSIVLVEEFLAGNEYSVPVLDGQVLPAVQVIPDGEFYDYHAKYVSDN
                     TQYVVPALNDERQAEVAKLVKAAYDVVGCRGWSRIDVMEDGEGKFRLVEVNTNPGMTS
                     HSIFPKSAATVGISFEKLVERVLELSA"
     gene            45238..46029
                     /locus_tag="PXD69_000108"
     CDS             45238..46029
                     /locus_tag="PXD69_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HDL6282360.1"
                     /translation="MGIFRKKNSTNVRLNVLNPKTPVSPRKWLVFIKPLIVLLCTLFV
                     FGVYSNWQNILESWDKTPIRAYALTHKTQFTTNADIRETLSKEPALKGYFGQNIQEVK
                     DKLLSIPWVKDVAVRKLYPDRLSITLLEHKPVAIWNDTNFVSEQGTVFSLPKDRIDKN
                     GLPLLYGPDTEGKSVLEAWNKIRADLNARNLDLTSVSVDNRGSWTIRLSNQVELRLGR
                     GEWTSKIDRFVIIFPEIHIPEGNRLAYVDLRYPHGAAVGFSPIKN"
     gene            46052..47323
                     /gene="ftsA"
                     /locus_tag="PXD69_000109"
     CDS             46052..47323
                     /gene="ftsA"
                     /locus_tag="PXD69_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDL6282361.1"
                     /translation="MTKAVESKIIVGLDIGTSKVVAVVGEVLPDGVINVMGAGVCPSK
                     GVDRGGVIDLDAAVNSIQRAIEQAESIADCQIMGVTLAISGQHIVGLNEAGSSTLSGG
                     IVTQDNIESAVDMAKAIKLQDGLETLHMIPQEYHVDRLPATKNPIGLSGMRLQVQAHL
                     IACHQAWLKNLKNAVEHAKLKVDQVVFSGLASSYSVLTEDEKELGVCLIDIGGGTMDV
                     LVYTDGALRYSKVIPFAGNNITDYLARVFTTSRPEAESLKVGYGSAISPPTHNSDKKI
                     EVAGLGGRMARTFTRAQVATVTSQCYNDLLKVVEEELTQLRHELFQKGIKQELIAGVV
                     ITGGGSQIEDIVECAKSIFGSQVRVGYPLNITGLTDYVNKPQYATALGLLQYSHYNYT
                     EQGTSTDSNEDIFAPIGRGTKKIIDFFKSKF"
     gene            47356..48603
                     /gene="ftsZ"
                     /locus_tag="PXD69_000110"
     CDS             47356..48603
                     /gene="ftsZ"
                     /locus_tag="PXD69_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDL6282362.1"
                     /translation="MFEPIIEQTQDAIIKVVGVGGGGGNAVDRMSRSADDIKGVEFFD
                     VNTDAQVLRKRTTRQTIQIGASTTKGLGAGADPMVGKQAAEEDREAIANALKGANMTF
                     IAVGMGGGTGTGAAPVVAQIAKEQGSLTVGVVTKPFRFEGPRRMRFADQGIKELSQYV
                     DSLIIIPNDKLRGLGKQTTAVDAFAAANDVLSNCVLGITNMITSSGGSTGADINVDFA
                     DVRTVMSGKGHAMIGTGFAEGEVGEGRAEKAMNDAISSPLLENVDISGASGMLINISA
                     GTDFLLEEVYAMMDLIYGFATEDAAIVFGCNYYPEMDGKVSVTLVATGIGQPEEALHM
                     PHKAQPVYAQQGNHVQATQPTQPNHAVQQPNFTQPSSYGQPNQFSGQPQPLQQPVAPK
                     PQSVDTAQIFNPNSIPGFMRNSQ"
     gene            48635..49555
                     /gene="lpxC"
                     /locus_tag="PXD69_000111"
     CDS             48635..49555
                     /gene="lpxC"
                     /locus_tag="PXD69_000111"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDL6282363.1"
                     /translation="MTKQRTLKQAAKVTGIGLHSGKKVTLTLRPAPANTGVIYARTDL
                     EPVVYFPASADSIRDTQLCTCMVNDDGVRISTVEHLNAAMSALGLDNVIVEVDAPEIP
                     IMDGSSSPFIYLLLDAGIEEQDAPKKFIRIKETVRVEEGDKWAELKPYNKGFKLNFTI
                     DFEHPLIPKNVGSYSIDFSAENFIQQLSRARTFTFMKDVEYLQSIGLALGGSLDNAIV
                     LDDYRILNEDGLRFKDELVRHKMLDSIGDLYMCGYNILGEFSAYKSGHGVNNKLLRAV
                     LENKNAWEFVTFEDKAEVPQGYQVQQEIFI"
     gene            49728..51410
                     /gene="recN"
                     /locus_tag="PXD69_000112"
     CDS             49728..51410
                     /gene="recN"
                     /locus_tag="PXD69_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDL6282364.1"
                     /translation="MLTQLTINNFAIVRHLILELNEGMSVITGETGAGKSIAIDALGL
                     CLGYRSESGMIRNGSDKADISATFTMQPHSPAYLWLQEHELLDEDNPQECILRRMINI
                     DGRSKAFVNNRSLPVSQLRELGQYLIHLNGQHAPQLLLKNEYQLEIVDHYATLQPLLM
                     KMAKQYGNWKELNKQVKNFQKQCQENEARKQLLEYQVEELDEFAIKANEFEEMEEKYN
                     ILSSSEELTELSDEITRLLSDDEINANSLIYKALRNAENLAEVDSQYQGILDMLNEAL
                     IQIQEASSEVAQLASKIEQDPELLQELDNRIAQTISLARKHHIQPNELWQYHATLKAE
                     LQELLDFEDNEEQLIQNEKQAYQECITLAEEIYQKRLDATHKLSEQVTKQIKHLAMEN
                     GEFFIHIEHNLEKMSANGADYVEFNLRSNLGQQPQPLAKIASGGELSRISLAVQVLTA
                     NKLSTPTIIFDEVDVGISGSAATTVGKLLRKLGEKCQVLCVTHLPQVASYGNQQFNVQ
                     KYVENNQTETQMTLLTEAERIHALARLLGGSEITETVLANAKEMLNLAKNNE"
     gene            complement(51457..51532)
                     /locus_tag="PXD69_000113"
     tRNA            complement(51457..51532)
                     /locus_tag="PXD69_000113"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(51497..51499),aa:Ala,seq:ggc)
     gene            complement(51612..53051)
                     /gene="gltX"
                     /locus_tag="PXD69_000114"
     CDS             complement(51612..53051)
                     /gene="gltX"
                     /locus_tag="PXD69_000114"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDL6282365.1"
                     /translation="MKIETLFPLDPNVKVRTRFAPSPTGYLHVGGARTALYSWLYAKH
                     NDGEFVLRIEDTDLERSTPEATAAILEGMEWLDLAWEHGPYFQTKRFDRYNQVIDQML
                     EAGTAYRCYCSKERLDEVRAEQEANKEKAKYDQHCLHNPQNDPSQPHVVRFKNPTEGS
                     VVFDDAVRGRIEIANSELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNT
                     PRQINILKALGAPIPTYAHVSMINGDDGQKLSKRHGAVSVMQYRDDGYLPEALINYLV
                     RLGWGHGDQEIFSRDEMIELFDIHSVSKSASAFNTEKLQWLNQHYIRSLAPSYVAKHL
                     EWHMQTQGIDFTSGPKLEEIIPVLGERCKTLKELAESSRYFYQEFKAYDEKAAAKNFK
                     AEAVAPLAKLLEKLTACNDWTVENIHEAMNQTAAELEIGMGKVGMPFRLAVTGSGQSP
                     SMDITAKLVGKERTLARLQKAIEFIQANS"
     gene            53226..53301
                     /locus_tag="PXD69_000115"
     tRNA            53226..53301
                     /locus_tag="PXD69_000115"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:53259..53261,aa:Val,seq:tac)
     gene            53350..53425
                     /locus_tag="PXD69_000116"
     tRNA            53350..53425
                     /locus_tag="PXD69_000116"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:53383..53385,aa:Val,seq:tac)
     gene            53478..53553
                     /locus_tag="PXD69_000117"
     tRNA            53478..53553
                     /locus_tag="PXD69_000117"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:53511..53513,aa:Val,seq:tac)
     gene            53602..53677
                     /locus_tag="PXD69_000118"
     tRNA            53602..53677
                     /locus_tag="PXD69_000118"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:53635..53637,aa:Val,seq:tac)
     gene            complement(53831..55324)
                     /gene="mltF"
                     /locus_tag="PXD69_000119"
     CDS             complement(53831..55324)
                     /gene="mltF"
                     /locus_tag="PXD69_000119"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HDL6282366.1"
                     /translation="MKGLIARLFIAVALLLWAWDMIFPWQKIIHSEANHYTQIQQSKT
                     LKVGMINHPLSYFVGPEGKSGIEYDLATAFAQYLKVNLDIKTYDSSEKLFEALRNNDV
                     DIAAAGLLYHSELNDEFQIGPSYYSASWQLVYKKGSARPYRLSDLRENVIIPAGSAVI
                     PILNQLKVDNPELKWQISDKFTQEELLLKVAQGEISHTIAMSVDISAAQHINPNLAVG
                     FDLTDENPVLWYLANSSYSELQSVLLDFMSYSMETGLISRIEEKYFNHLAKFDYVDIQ
                     SYLNAIKTILPKYEPLFRAHKGELEWQMLAAIAYQESHWDPNATSPTGVRGIMMLTKD
                     TADRMKISDRTNPAQSIKAGSEYLHMLMRQMPETIPQADRIWYSLAAYNMGLGHLLDL
                     RRLTKQLGGDPDNWLDVKKNLPLLAEKRYYANLKYGYARGYEALQYVENIRRYYGSII
                     NYQRVEEQKMQEQENLPDGQIKQENSSYEKIEEKEIPTDKEITPASN"
BASE COUNT        16273 a        11413 c        11923 g        15830 t
ORIGIN      
        1 aagctgttcg tgcgttaatt aaagttgaat cttgttagtt attttcctca aggcaagtga
       61 ttgatagata cgtctgtaat atcccgttta gctatctttt atcacttttt gtatttatat
      121 aaggaaaatt ttatgtcagc aattaccggc acagtaaaat ggttcaacgc caccaaaggt
      181 tttggtttta tcacccctga tcaaggtggc aaagatgtat tcgtacactt ctctgctatc
      241 gaagcaaacg gcggctaccg cacattagaa gacggtgcta aagtacaatt tgaaatccaa
      301 gattcagagc gtggagcttc agccgtaaac gtgaaaacaa tctaatttca gcaaattcaa
      361 tgaatttcga taaaaatgcc gacaacttgt cggcattttt gctatcaatt aatctgtact
      421 tcaaaccttt tcggcacaat aaaaatggca ggtagggtaa aaattgccat caaccaaaat
      481 gtcaggcttg gggaatgttg atagaccatt ccggcaataa aggtaaatac tgccataaaa
      541 gcacagcttg ccaagccaaa atagagacct tgtaatttcg tcacacgctc tgccgattgc
      601 atcgaaatat agcgaatcat cgcaatatga gccgccccga aggtaataga atgtagcatt
      661 tgcattacaa taatcagcac gatctctgta gtactaccca ttattgccca acgaatcact
      721 gcaaaaacgg cagctaaaat cattaaatgg ctgattttcc acgatttaaa caagcgttta
      781 gagaccaaaa agaacaaaat ttccgccacc accgccaagc cccaaaacag gctagtcatt
      841 gcggttgaaa tactggcatt tgaccaatga atggtgctgt aagtgtaata agcggcgtgc
      901 gaggctgaaa ttaacgacac cgcgatcaac atttttaagg tttccggctc tttcaataat
      961 tggcgataag ttacgcttga agtattggct ttattacctt gttcttcaaa cccgactttg
     1021 ggcgtagcaa gctgccctat tcctaaaaaa accaagaaac cgatgataat ccacaccacc
     1081 gaattttcac caagcaagcc gataagatag ccggcagaaa gtgagcctac cacaaacgcc
     1141 attgagccga ataaccttgc tctgccgtaa tccagcccga tctgatgttg ccaaattgag
     1201 gcaatgctat cggctatcgg cattgccccc gaattgaaca tttgaaacaa cattaacacc
     1261 ggaaaaagta gccaaatgaa atcccctgaa aacagcaacg ccgccgcagc cgcaatattc
     1321 agccaagtta aactgcgggc ggtgggaatg agttggctca cggtttttac ccgttgtgag
     1381 gcaagcatac tgccggcaaa gcggaacaaa tagccaacgg cggcaaataa gccgatcatt
     1441 tcagtcgaat agccgtgatg tttaagccac actggcaaaa acggcaacaa cacgccatag
     1501 gcacaaaaaa agccaaagta attaaatgcc gcccattgga acggggaaac tttcatcata
     1561 acgattgctc catttctctg gctcgatgaa ttgccgccca cattgcatca tcaacggttt
     1621 tagcaagatc gtgctgctca aacacctcaa gggctttcgc cgttgtgcct ccctttgagg
     1681 tcacattttc ccgcaaggtc gaaagtggcg tagtcgggtt cgcttccacc aatttcgccg
     1741 cccccaatgc gacagattgt acaagcgttc ttgcgtcctg ctcggaaaag cccatttgca
     1801 ccgcactttg ctgcattgcc tccataaaac ggaagaaata cgccgggctt gagccggtta
     1861 tcgcaataat gtggttgatt tgctcctcgg tttccaccca gtaacattta ccaacggctg
     1921 acatcaactg ttcggcaaat tggcaagcgg tcggatttac cgattttttt gcaaataatc
     1981 cggtcattcc ttcgctgatt aaagacgggg tgtttggcat cgtgcgaatg atatttttcg
     2041 cactcggcaa cagcgtttcc aagcgttgca cagaaatacc tgctgctact gaaatcaccc
     2101 atttgttgga aaaatcaaca tcggcaaact cggcacacac ttgtgccatc atctgtggtt
     2161 ttaccgccag cacgatcacg tcagcctgct ctaccgcctc acgatttgca aaatttgtcg
     2221 caattccgac cgcttgtaac tcctctcggc gagccaaatt acttttattg cacgcaatga
     2281 tttgttcggc agaataaccg ctttttaata agccttgaat aatcgcatac gccatatttc
     2341 cggtgccgat aaaggcaagt tttttctcgt tcattcgcaa attctctact gtgttgggtt
     2401 gaggtctgtt aaaataacac tattctacac ccgataaagg atatgcaaaa atggtttggt
     2461 tcaaaaatgt gatgatctat aaattaaccg gcgagctggc gttggaaagc aatagcctta
     2521 acgagttaca gcaagaaacc cgctttaccc cttgcagcca gcacgatatg agcaaattcg
     2581 gctgggctac gccacttacc ggctcggatt tactgcattt ctcacaagcg aaccaatttt
     2641 tgctgatttc acacaaagaa gataaattat tacctgccaa tgtggtgaaa gccgaaaccg
     2701 agcaacgcat tgcagaactg gaagaaaaag aggctcgtaa gctgaaaaaa accgaaaaac
     2761 aagccgtgaa agatcaggtc gtttctgcgt tattgcctcg agcattcagc aaacatcaat
     2821 tcaccgctct ttggttggat ttagataatc agttggttta tgtggatgca gcctcgagca
     2881 aacgggcgga agatacgctg gcgttactgc gaaaaacact tggctcgttg ccggttgtgc
     2941 cgatttcctt taccctaccg ccggcagagg taatgacgaa ttggatcgcc aaagggcata
     3001 cgccaagttg gttgaatttg ttggaagagg cagaactgaa atctttcgat accgacagca
     3061 ttattcgctg taaacgccaa gatttagaga cggaagaaat cgcccggcac ttgcaagcgg
     3121 gcaaatttat cacaaaactt gcgattgaat gggaagggca tttcaattgc gtgttaaatg
     3181 aagacgccac gctttcacgc ctgaagtttg ccgatgaagt gcgagagaaa aatgacgata
     3241 ttctcaaaga agatgtggct caacgctttg atgccgattt cttattaatg accgaagagc
     3301 tgaaactttt caccgaaaaa atgattgccg aatttggcgg aattaaatcc agaatttaga
     3361 aaaaaattta aggaaagcaa tgttagatca aaccattatc gaccaatatg acgccttgat
     3421 ttttgatatg gacggcacat taattgacac gatgccaagc cacgccaagg cgtgggaaaa
     3481 ggtgggcgaa gtgttaggct acccaatcaa tccaaagcca atgtacgaac tgagtggctc
     3541 aaccactttt gtgattgccc gagaaataat gcaacgctcc aatatccccg agcattattt
     3601 tgagcaagtg gtacaactaa aacgggaatt tgggattgaa atggtgttag ccaatgccac
     3661 tctgttgcct gcctttgaga ttattaaagc taacgttggc aaaaaaccaa tggcaatcgg
     3721 cacaggctca caccgtgcaa tggtggaatt attagaccaa aaatttaact tacgtcaata
     3781 tgtttcggtt attgtagatt ctgatgatgt aagcaaccat aagccagccc ctgaaacctt
     3841 tttaaaatgt gcggaaaaac ttggcattgc cccacaccgc tgtttggtgt ttgaagatgc
     3901 cgatttaggc gtgcaagccg ccctcaacgg caatatgaac gtgtttgatg tacgtacgaa
     3961 tacgataact cactcaaccc gttaaaaatg ataggtttat atgaaaacag aatggattaa
     4021 acatttaatt caacaattaa ccacgctttc caaagccatc gaaaactact ttaccagcgg
     4081 ttcatttggg gtgaaattct acccttttct aatgcaccct tgttttcgta aaagctgtgc
     4141 ctttttgatt tttattattg ctatggtttc aagttttagc gggctatttt atttggtggc
     4201 ggaacacatc acgattttat ttagcgaaag atcgctcacc acttacttcc accatagcac
     4261 ccttgaattg atgattccag tcggcacaat gatagatgaa aaaatcagcg aattatcacc
     4321 actttcggtg gtaatgcgtt caatgtttgt gctacaagca gtcgtttttt tctttattta
     4381 tgcaatcggc atcacccaca ttgctcacaa caaattgcgg gtcatcggct tattgctttc
     4441 gctatgcttt gcgattggct gctcactagt tgccggtatt cagccaagca gtcgtggcga
     4501 attcggcatt tacaatttag gggcaagcat tacgttttta atcggcaatt taacgctgat
     4561 catcgcaggc ttcgatctct accacccttc aatgcaattt tttaaacgct ttagcattgg
     4621 tgcgggcgtt atcggggcaa tctgtatttt aatcacgatt ttcctaccaa ccctgtttag
     4681 cccgttaatt gaacgagcag gtatttatac cattatggga aattttagcc ggttttgcca
     4741 tcattaaacg cctgttgaaa ttgccctcat tcagacaaca aggataacca atgaaacaga
     4801 ttccctttat tcaacgctat gctcaactga ttgagctacc gaccatttcc agccttgttg
     4861 ccgaagaaga tttatcgaac cgccgtttga ttgaattgct cgccacttgg ctggcagatt
     4921 tcggctttaa aaccgagatt ttagcggtag aaggcagccg taataaatac aatttacttg
     4981 cgacctatgg cgagggtgag ggcggcttat tattggcagg gcataccgac accgtgccgt
     5041 ttgatgaagg aaaatggcgc ttcaatccat tccaattaac cgaaaaagca ggcaaactct
     5101 acggcttagg cacggcagat atgaaaggct ttttcgcctt tgtggtggag gttgtgagcc
     5161 aactcgacct aacccaaatc aaaaagccga ttcgcattct tgccaccgct gatgaagaaa
     5221 ccacaatgct gggggcaaga acctttgctc agcacagcca cattcgcccc gattgtgcga
     5281 ttattggcga gccgacctcg ctcaaaccga ttcgagccca caaagggcat attggcgaat
     5341 cggttcgcat taccggcaga agcggacact ccagcgaccc cgccaaaggc attaatgcga
     5401 ttgaattaat gcaccaatct atcggttatt taatgaaaat gcgtgatgaa ctgcgagaga
     5461 aataccacaa tccgctgttc caagtcaccc acccgacaat gaacttcggc aatattcacg
     5521 gcggcgatgc cattaaccgc atttgtgcct gttgcgaatt gcaatttgat atgcgaccac
     5581 taccgaatat ggcggtgcaa gatttgtatg caatggtaaa cgagcattta aaaccgatgc
     5641 tggaacaata tggcgattta attgaaatcc gccatttaca cgatggaatt ccgggctacg
     5701 aatgcgaaca ctcggcacaa atcgtgcaag tggttgaaaa gctactgggc gaaaaatgcg
     5761 atgccgtcaa ttactgcacc gaagccccat tcattcaaca actctgccca acgctggtac
     5821 taggccccgg ctccattgaa caagcccacc agcccgatga gtttttggaa atgaaatata
     5881 tcgaaccgac aaaagagtta ttgactaaat tgatttatca tttttgtgga taaatcaaca
     5941 gaaacaagcg ctcattttcg ccatactttt tgcaaaagaa tcggcaaaaa tgaccgcttg
     6001 atatttagta ttgagtgacc tataaacttc catacttcat cattgattta aggagattct
     6061 gttagatagg tattaatctc tagctaggtc ttggatacaa acggcgagaa tgaattatag
     6121 taataatata tactttttct aggtgtatct catagacaat acgataattg cggcagaatg
     6181 tttctaatgt gccatcttct ctacgtcgcc ctattgtagg cataaatgca atgagatcga
     6241 gtttattttg taattgttcc caaagtgaaa ctgcgctcaa ccaatgccct gtataatctt
     6301 ctaccgactg taaaatctca atgacattag accttgcggt aagtgacagc tcccaagatt
     6361 taggcataat taacctcaaa caaattttca ttttctcgta attgctgacg tttctgcata
     6421 tccgcaaata aatgatttaa ttcgttattg atttgttctt tggtaaaggt ttctcctcga
     6481 gctattgctt cttgaccagc tttaatttgc tctgcaagaa actcatcata tccttgttct
     6541 ttgaatagca tattctgctc ctttgatttg tgtcttgatt ccactatgtt caagacatag
     6601 tttaagttta aatctacgct caaagcaatg aagagtcaag ggaatcctta tgttgatagg
     6661 gtgtgcatat ttttcgagtc aaatgaatta aaaatcatca ttacgatcac ccactcatag
     6721 attttatctt cctatctaag gtcatcttct tatatcaaac aagcggtcta aatttgcaaa
     6781 aaaatgacaa atttagaccg cttgtgagtt acaaaaatat aaactaattg agcttatcaa
     6841 ttactgcgca taactaaata ctttcaccac tttggttact ccacctacat tgcgagcggc
     6901 ttcggcggcg gcatcagctt ggttttggct gactttgccc attaaaaaca cttcgccgtt
     6961 ttcggtgacg actttcactt cggtggcttt tacctcgcta tttactaaca gtttggattt
     7021 cacttgggtg gtaatccagc tgtcttgtgt aatctgtcca aagccgattt tttcgccttg
     7081 gcggatttcg ttgtaaattt ccgtcacgcc ctccgcccca gcagcgaggt ttttcgcatt
     7141 ttccactacg tccatacttg gtgcttgccc gattaataac actttgccgt tgtaagccac
     7201 cacgttaatg cgggcttctt gtttgatttg ctcgtcttta ttaatgttgt aagcgacttt
     7261 ttcttctaaa atttcatcat caacttgcgt gccggtggtg cgtgggtctg tcgccacttt
     7321 agttgcaacc gccgcagaag tcaccaccgc cgtggtgata caaccttgta aagagataaa
     7381 acctaatact aataggctgc cctttaatag tttatttgct aatttgttca taatctctcc
     7441 ttacgaaaat agtaaatggt cgataagttc acataataaa ttcacataaa aatgatggct
     7501 ttcaatcacc ctcagttgat tggttgaagg ggctgaaatt tcaatatcac tttcatctaa
     7561 taagccgagt gtgtggtcgt tattactgcc tgttaaagca ataatatcta aatctaaatg
     7621 ttgatttttc gccgtatgaa tagcttgcaa tatacattct tcattaccca caggcgaaaa
     7681 aacaatgaag agatcaccct cttttgcaac cgcctgcaac tgttttttat aaacagcctc
     7741 taactcgtta tcttgtgcca caactcctgc caatacaccg cttaattgca gttgtacggc
     7801 agcaaaactc ggtcttgcca gttcataacg gtgaagtaag tggctgacca ataattcggc
     7861 attaccgtaa gagcgaccgt gtccgcagac gataacttta tcgccacgca acaaacaggc
     7921 aacaatgcgg tttgccgctt cacttaattt agccggcaat agctcagagg cggaaatttg
     7981 ggtttgaata ctttcggtaa atctatcttg gattttattt aacattcttt ctaacctaaa
     8041 aagttgggaa tccacacagg cgtttggttt ccttcaaaag caaccacatc aaaacggcaa
     8101 tttgcagttt ctaaactttg gttttgttta agcaaccaca tattagcggc attttgccat
     8161 ttttgttgct tgcggtaatc aatactctca acggctgaac cgaagcggtt gcttttacgc
     8221 tggcgaactt ctacaaacac aacggtttgt ccgtcttgca taatcggatc cagttcgcca
     8281 cctttaaatg cttggttagc ggcaacaaaa cgaagccctt gctgttctaa aaacactcgg
     8341 gctttttgtt cataaaacga gccttgttcc cgtttattaa taagcttgtt gaatagctcc
     8401 attgcgatat tgcatccaag ataaactacg ttcaatatta caatgttgtc cggcttttaa
     8461 ctcaccggtt aaacctgaaa ttttgtagcc cggaatatgg cggaattcat tgaatttggt
     8521 tgccaatgac cacgcatcag cccccattgc gtataaacgc atcattgaga aatcgctatt
     8581 ggctaaattc tcggcttttt tatattcact agaactttga tcagctaaca gtggcacttc
     8641 actaaatttt accccttcca ttgaagtgta aaaatcaatg ccgttatttg gcgaattact
     8701 gcgagatgag gtatagatcg ctaaacgatc ttttaaggtt gagctatcaa taccttgttt
     8761 aatttctaat acttgctcgg cattccccaa aatatataaa gctgctttgc tcacacctgc
     8821 attttgaata gcggcaacgg catcaagcgg ttggttgtag taacgcacat cagcatcgct
     8881 attggtaagc tgacgccagc gtttggcaaa ggcttctgcc gagcggttgc cgtagtcatc
     8941 ttgaggggcc gcaacgatag cgacactatt accgtcttga taaatttttt ccgcccctga
     9001 ttgtgcctca gattcaggag ataaaccgta gtaacacacc tgagcaatat tacgcacatt
     9061 ttcagtggca ttcagtgcca aaatattcac gttttggatt tctgggctaa gtagcatttc
     9121 atcaacacga gatttgagca atggcccgac aatcacattt gccccttgct gttttgcctg
     9181 tgaaattaag gaattaacat cagatgaatc ggtatcaaaa gtttgcactg cggttgagtc
     9241 atcagcctta gcatcattaa aaccacgctt gataatatca cccaaaattt ttgcatcacc
     9301 acttagaggc aatagcaatg cgacactgtt taactgggtt tgttggaaat tactcacccc
     9361 ttgtaattcc gttggcatta cggcaaccgc actatggctc gggtattggg ctttccaatt
     9421 attaattgct tgtggcattt gtgccggtgt cgtcacattt tgattataga tattaattaa
     9481 tgccaaccaa ccagcaagct ccatctcacc cgcttcaggc acagtttttt ccagcattcc
     9541 tcgatttgca tcacgcaagg tttgccaaat aatatcgtta ttttcttggc gttcacggtt
     9601 cattttatag aaattgttaa gttgcgatct tgcacgcaca atgccaatca catctttctg
     9661 attggcagca atacgggctt gggtttgaat ataacgcaaa cgctgtgccg aacttaatag
     9721 cggatcttga atggctttta attggcttgt tgcttgctcg tttttccctt gtaaggcggc
     9781 aagctgggcg gaaaccaagg catactctaa cttttgcacc tcgttcatct ctgcggtcag
     9841 aatttcacta aaggtatttt gagcctcata ttccttattt tcatcaatta atttgcgtac
     9901 agctaaaagt tgatacgaaa ttttatcttc cgcttctttg gtttgatctg ctttattaat
     9961 atagaattcc gagcttgaat aggcttcatt tttaatggat tcggtgacag gatttaccga
    10021 tgtacaggca gaaatgaata atgcaatcgc cgttggcacc aatgcctttt tcattgtatg
    10081 gtttaaaata gttgccattg tcagatcctc aatagaatat aatgtgctaa atttaatgtg
    10141 aaatcttact tatcaaacga gctaaaagca aatgaaaaac agacaaaatt catctggaat
    10201 caacccaaat tacggaattt tatatattgt tgccacgcct atcggcaatt taggcgatat
    10261 tacccaacgg gcgttagaca ccctttcatc tgtcgattta gtcgccgccg aagacactcg
    10321 ccacagcggt ttattgctga gccactacgg cattaaaaaa ccgtttttcg ccttgcacga
    10381 ccataatgaa cagcagaaag cggtcgtttt agtcgaaaaa ttagcaaaag gggaaaacat
    10441 tgcgttaatt tccgatgccg gaacgccact gattagcgac ccgggctttc atcttgtccg
    10501 tcattgccgc caagccgggg taaaagttgt gccgatcccc ggggcttgtg ccgctgttac
    10561 tgccttatgt gcttcaggca tagcttcaga ccgtttttgt tttgaagggt tcttaccggc
    10621 aaaaacaaaa tcccgttgcg ataaacttac cgagcttgaa aacgagcctc gcacactgat
    10681 tttttatgaa tccacccacc gtattttaga cactcttgcc gatatgcaga ctgtttttgg
    10741 cgaagatcgc tatgtggtaa tggcgcgtga aatcacgaaa acgtgggaaa ccatttatgg
    10801 agatcaactg ggtaacttaa ttgaatggct aaatgaggat agcaaccgaa ttaaaggcga
    10861 aattgttctg gtggttgaag gtaaaccgca aagtagtgag gaagcctttt ccagccaagc
    10921 gatcaaatta ctgacattac tctgccaaga acttccgctt aaaaaagccg ctgccattgt
    10981 ggcagaaacc ttcggctata agaaaaatgc cctgtatcaa tatggattgg agcattttga
    11041 gtaacagaca agcggtcaga ttttgtgagt tttttgcaga ttggcactcc cctctctctg
    11101 aaaaatgttt ctgaacgaaa catttcccgg tctcaatact cgctacgctc gctccttcgg
    11161 agccgttggc aaagccaacg ttcaaatgta aacatttgtc ccataagggg agagagctaa
    11221 attattcgct tgtcgacccc tctccactcg tgggagaggg acagattctt cttcgttcag
    11281 aagaaaaatc agggagaggg ggaagtttct cgcactaaat tccgataagc atatgccata
    11341 atcgcaaaca tcaacagcaa gtaaagcggt aataattgaa tgctgatagc attagcaata
    11401 aagccgaaaa tcggtggcaa taacaggacg ccgatatagg cacttgccat ttgcacgccg
    11461 atcaccgatt gagacttgtc ctcgccgaaa aacgcagggg tcgaatgaat taagcacggg
    11521 aaaatcgggg cacaacctag cccgataata attaaacttg ccagcgtaac atatttgcct
    11581 aacggcaagc acagtatcgc aatgccgact aagatcaagg ctgaaccaag tttaatcatt
    11641 tgtctgttgc taaatttaag cgtcaagaag ccacttacgc ctctgccaac ggtaatgccg
    11701 ataaagaaaa tactgccgaa cgcagccgct tgttctaagc cgacatcttt aaccattaca
    11761 aaatagctac tcgcccacag tccggcggtt tgttctacgc cacaatagcc aaaaaaagct
    11821 aaaatgccat atttcacgcc cggaattttt agcgtttctt ttaagctcat cggttttgcc
    11881 gaatggttga tttcagcggt aatctgcttg cgtaatttcc aaaaaggcag tgagcaaaac
    11941 agcattagcg ttagcccgat ttgtaacatt gaaatggtga aatagcctgc ctcccagcct
    12001 cgcccttgca ataaggcgta gcctaaaatg tgcggcccga tagaagctcc aacgccccac
    12061 atacaatgca gccagctcat atggcggctt gcgtagtgaa ctgctacata gttattcaac
    12121 gccgcatcaa ccgctccagc ccctaagccg taaggaattg cccataaaca taagatccag
    12181 aaagcatcac tgattgaaaa gccccacaat gctaaagccg ttaaggcaac gctgatgacc
    12241 attactttgc ctgtgccgag atggtaggtc agtttgtccg acattaagct agaggtaata
    12301 gtgccaatcg acataatcat cgagaccaca ccggcatagg aaagcggaac agcaagctgt
    12361 tggtgcattg acggccacgc cgagcctaaa attgcatcag gcaacccaag gctgataaaa
    12421 gagagataaa taatagcgag taggaggtta gtcatagctt acaatcggtc acaaaaagca
    12481 tcgctttttg aacgttggct ctgccaacgg gagcgaagct gtgaacaatc cttacaagga
    12541 ttgtgaataa tttttgataa attttttgta aaaaaatggc ttaaggagac cttaagccaa
    12601 attttattat ttcacttctg ccaaataggc cttattagca cggtcaaagg tgtctaatac
    12661 ggctttgctt ggcattggcg tgataagtga taccacaatg atcattaggg tagcagcaat
    12721 aaagcccggg atcatcgagt aaatttccgg taaggcgagc ttaagtgtaa tatcgcccca
    12781 aaaatgcacg attaacgcac cggtcagcat tccggcaatc gccccaaaac cgttcatacg
    12841 tttccagaat agtgaaagca ataccacagg cccaaatgcc gagccgaaac ctgcccacgc
    12901 attacgcact aagccaaata ctttgctgtc cgggtcttgg gcaatataaa tagctaatgc
    12961 tgccaccgca agcaccatca agcggcttaa ccaaaccagt tctttatcgg aggcttgagg
    13021 gcgtaaaatg cctttgtata aatcttcggt aatcgcactt gaacaaatca gtaattgagc
    13081 ggaaagggta ctcattaccg cagcaagaat ggcagataat aaaatgccgg ctacccaagg
    13141 gttaaataac aatttagcta attcaatgaa aatttgttcc ggatttttgc tgatattgcc
    13201 gacttgctcc gggttgccaa agaaatatgc cataccaaaa taaccaatgc ctattgcccc
    13261 cagtaagcag ataatcatcc aagtcatact gatacggcgt gcattttcaa gagacttcac
    13321 actttctgcc gccataaaac gcaccacaat atgcggttgt ccgaaataac ccagccccca
    13381 cgccattaag ctgataatgc ctaatacgct ggtgccggtg aaaatgtcgt tgtagtcttt
    13441 ttgtgccatc tcgcctgcac ggtcgattaa ggcttgcatt tcatcaaaac cacctaagtt
    13501 atacatcaca aaaaacgggg tgagaatcag ggcaaaaacc attaatgaag cttgaatagt
    13561 atccgtccaa cttactgcta agaaaccacc aataaaggtg taaagaatgg tagcaacagc
    13621 cccataccaa attgcttggt ggtaaggtaa gccaaataag ttttcaaata ccctcgcacc
    13681 ggccacaacg cctgatgcac agtaaattgc aaaaaagagt aaaaaaatga ccgctgataa
    13741 aatcttaatt aaacgggttt tatcgccaaa acggttatga aaatattcgg gtaaggttaa
    13801 ggcatcgcca ctgtgttctg tatgcgagcg taatctgcct gcgactaatt tccagtttag
    13861 ataagcaccg atagttaaac cgattgcgat ccagccttcg atcaaaccgc ctgcataaac
    13921 ggctccgggt aatcccatca gcaaccagcc ggacatatct gatgcaccgg cagaaagtgc
    13981 ggtcacaaag ctacctaaac ggcgaccgcc taaaatatag tctgaaaggt tattggtaac
    14041 acgataggca ataaagccga tggcaatcat tcctagaata tagacaacaa acataattgt
    14101 tgttggatca agaccaaaca ttattaatga atcctcaaga tttcttattg tataaagatt
    14161 aaagtgagta aagggtaaaa gattacctga aataatcaaa atggcaacac aaaattaccg
    14221 tccgcccagc tcagctgaaa ttttttctgc tgtttcttga atagccggta gtagattttc
    14281 ccgccccagc tgatttaaac gagcagttga aagcgaaaca gaaatcgcat aatggacttt
    14341 ttgttggtga tcaaaaatcg ggcaagcaat acaagaaacc cctaattcat tttcttcgtt
    14401 atccattgca aaaccttgac ggcgaatggt ttccagctcg gtttgcattc cgtcaatcgt
    14461 ggtgatggta ttgaccgtca gtttttgaat gatgtccgat ttagtctgcc aatattgtgg
    14521 aatgtaatct gccgaaccat aagcaagaaa cagttttccc attcccgagc aatagagttg
    14581 catttgttgc ccgatatagg ctcgggtacg catcattccg gtggtagctt ctaatttatt
    14641 gattaaaata gcgtgatcgt tttcccgcat cgcaaaattt accgtctcgc ctaaggttaa
    14701 atttagggct tctaaatgtg gggcggcaat atgcaaaatg ttaatcgaac ttaaggctcg
    14761 ctgcccgatt gccaaacatt tggtggttaa acgataactg cccgcagtcg gtgcagggcg
    14821 gacgtagccc tcttgttgta agccttgtag cagacggtga accgtgcttt tgttcagccc
    14881 cgaaagctcg gctaaatggg caagcggaca gccgtttggg aatttcgcta acaattccaa
    14941 tagtgttaag ccacgaatta aactttgatt tccactcgat tccttttctt tctttgcatt
    15001 catttggctg ctcccaaaat aatatgatct aacggcatat cccaactctc aatcggtaat
    15061 tgttcgactt gctgacattc gtgtgccaaa ccgacactaa tcagatgagg tgcttgagca
    15121 agggttctat cataaaagcc acctcccatt cccagccgat ttccggcttt atcacaagca
    15181 acaagtgggg taaaaatcat ctctaattct tgcaacggaa ggatatttct aacatctaat
    15241 atcggctctt gaatccccaa gcggttaaat tttagaatag ttttgcaatt gtaatttaca
    15301 aacaataatt gaccgcttgt aaaagggtgc aacagcggca gatacagctt tttgccctgt
    15361 tgaagtaatt gttccattaa aggaatagga gaaatttcac cgttaaaagg caaataaaag
    15421 gcaatatgtg agacttggta agattcaatc aatgaaagag cttgaggaat aatggattcg
    15481 gctgcttgag tttgctgacc ggcagttaaa ctttgccgtt taagccgcat tgattgccgt
    15541 aattggctac gaagatcggt taaagatgat tgattcatat aaagacccga gatgccgcta
    15601 ccagtaatgg tccttgaacc agtcggttca agggagtcaa acttaactgc ttttaggctt
    15661 cttactccta attaaattag ggtaagcttg ctcaccagcg ttagatgtcc aactcaaagt
    15721 ttcaaattat cggctcaggg acgtaactcg taacgcacac cccaggcaag acttatagta
    15781 acggaatttg atgatttttc ctagtattta atcccacaaa atgcaaattc tcaatctttt
    15841 tggctctatt cctaatcaat tcgattaaaa attacctaat tggattgaaa tttgccaagc
    15901 gaattatcta actgctcaat acaagccacc aacacatttt tattttctgc attttggcgt
    15961 tgggcttgct ccagttcata atttaaattc agtgccacaa tcgctaacac tttttcaagc
    16021 tgaataatgc cggactgctc tttcaatacc accacacgct cttccaaacg ctgtgctgaa
    16081 gccagtaaat gctcttgctg ttcaacaggg cattgcaagc gtaaaacctg cccaaaaatc
    16141 tgtagttcga tattatttgc cgacataaat acgaaatcct cacttaatcg caaaattttt
    16201 gctatattat gccattcttt agcaaaatca caaataatcc cattatggct atcacagatt
    16261 cccaacaatt taaacaactg gtatcacaat tacaaattga tgatacaccg gcagagtttc
    16321 acggtttttt atgcggttta attgccggcg gtattcaaga tgagtcttgg aaaaccctca
    16381 cctaccaatt taccaatgac ggacacgcat tttccatcga gccgttaaac actttaaccg
    16441 atttttatca gcaattaagt gaaagctttt cagaagccaa cacgctgttt agcctttggt
    16501 tgccacaaaa cgaagaagat ggttttgcct tagctgatgg tatctccgaa tggacaaaca
    16561 gtttcttact tggacttggc gttgctcaac ctaaattaca acaagaaacc gatgaggttg
    16621 gcgaggcaat cgatgattta gatgaaatcg ccaaactagg ctacagtgac gatgataata
    16681 acgaggaact actggaggct ggcgaagaag tgttggaata tctgcgagtt ttagccttat
    16741 tcttgcacag ccattttgct ttaggcgtgc cgaaaaccga agaaaagcca ccattacact
    16801 aatgaataaa tacaagcggt tcaatttcat ctctattttg caaatatatt atgcggggcg
    16861 aaaaatattt cgcccctacc aaaatcaaag gaaaaaccaa tgtcagaatt aaaaaacgat
    16921 cgctatttaa aagcgttatt gcgtgaacct gtggatatga ccccggtctg gatgatgcgt
    16981 caagccgggc gttatttgcc ggaatataaa gccacccgag cagaagccgg cgattttatg
    17041 tcactctgcc gtaacgctga tttagcgtgt gaagtcacct tacaaccgct acgccgttat
    17101 gaactcgatg cagctatcct attttccgat attttaactg tgcctgatgc aatgggatta
    17161 ggtttaagtt ttggtgcagg tgaaggccct aaatttgccc gcccggtggc aagcctcaat
    17221 gatgtcaatc agctaccgat tcctgatccg gaagacgagt tgcaatatgt aatgaatgcg
    17281 gtgcgtacca ttcgccgaga attgaaaggc gaagtgccac taattggttt ttctggcagc
    17341 ccttggacac tcgccaccta tatggtggaa ggtggttcaa gcaaagcatt taccaaaatc
    17401 aaaaaaatgc tttacgctga gcctcacatt ctacacaaat tgctggacaa gttagctgac
    17461 agtgtcatct tatacttaaa tgcccaaatc aaagccggtg ctcaagcggt gatggtattc
    17521 gacacttggg gcggtgtatt ggctcacgag gattacaaag ccttctcatt acactatatg
    17581 cacaaaattg tggacggctt aattcgagaa aatgaaggac gtaaagtgcc tgttacccta
    17641 ttcaccaaag gcggaggctt atggttagaa gcgattgcag aaacgggctg cgatgccgtt
    17701 gggctagatt ggacagtcga tattgccgat gctcgccgcc gtattggcga caaagttgcg
    17761 ttgcaaggca atatggatcc aagcgtgctg tatgcaagcc ctgaacgaat cgaacaagaa
    17821 gtaaaaaaca ttcttgccgg cttcggcaac ggcagcggac acgtctttaa tcttggacac
    17881 ggcattcatt tagatgtgcc ggtggaaagc ccgaaagtgt ttgttgatgc gattcacaac
    17941 tactcgaagc agtatcataa ataatggata aaatgccctc tctccttgtg ggagagggac
    18001 agatttttct ttgttcagaa gaaaaatcag ggagaggggc aagcggtcat ttttatacag
    18061 aattttgcaa aatcgttccc ttctctctga aaaataaaga aggaaataca atgagaaacc
    18121 cgattcataa acgcatggaa cgtttcgagc cttggcaaaa caccacattt atggcgtgcc
    18181 tatgcgaaag aatgtacccc aactatcagc ttttttgtga agtaaccgaa cagcctgaaa
    18241 aagctaaggt attccaaaat attttaaatt tagtctggga atatttaacc ataaaagggg
    18301 caaaaattaa tttcgataac caactggaaa aattagaaga aatcattcct gatgtgaacg
    18361 aatatgcgtt ttttggtgtc ttacctgcac aggaagcttg cgaagccctt tctgaacttc
    18421 ttcacagtat tatcgctggt tcaacccttg aacaagcaat ccgcatcagc caaatttcat
    18481 taggcacagt tgccagctat ttggaaatgc aacaagataa agaactgaac gagcaagagc
    18541 taaagaattc tgaagaaatt caagaagaac tggacgtaca gtggcaaata taccgcttgc
    18601 taaacgaatg tgaaaaacgt gatcttgatc tcatttttga acttaaagat gaaatcagaa
    18661 gcagcgggat tagtaatatc gggttaaata ttaaccaata gcattgatat ttgcaaaatc
    18721 ttgcttaata atactttgag aaatcttaac tttgaattaa gctatcgcaa ggtttcaata
    18781 acttctcaga cgttttacgt catttattaa aaacacatat cttagaggat aaaactatga
    18841 acaaaactga gttaatcgat gctatcgccg ctggtgcaaa cttaaccaag aaagatgcta
    18901 aagcagcatt agaagcaact cttgatgcaa tctctgcaag cttaaaagca ggcgacgctg
    18961 ttcaattaat cggcttcggt acttttaaag taaatgagcg taaagcacgt actggtcgta
    19021 acccaaaaac tggtgaagag atcaaaattg cagcagctaa agtacctgca ttcgtttcag
    19081 gtaaagcatt aaaagattta gtaaaataat tctttaaaga tataaaaata aagcctggat
    19141 tataatccag gctttatttt tagcgtgttt cgatagctac agagaaacta aaaagcacta
    19201 tttgctttca atcgcttttt tcatttcttc aacttttgtt tctgtctcaa ctttcacttc
    19261 tgctgccttc tcagctactg cctttttagc ttcttctgct ttatctgctg ttgcttgagt
    19321 cgcatcactt gctgctgctt ttagttcttc cactttagct tcagttgtgg cttttaactc
    19381 agcagctttc tctgctactg ccttttttgc ctcttctgtt ttatctgttg ttgcttgagc
    19441 tgcatcattt gctgctgctt ttagttcttc cactttagct tcagttgtgg tttttaactc
    19501 agtggctttc tctgccactg ccttttttgc ctcttctgtt ttatctgctg ttgcttgagc
    19561 tgcatcattt gctgccgctt tcaactcttc aaccttcgct tcagtagccg atttaacttc
    19621 tgcagctttt tcagctacag cttcttttac ttcaaccgct ttgtctgtag ttgattgcgc
    19681 ggcttctttt gcctgatcac aagcagcaag tgccatagtt gtacctaaca ctaataatga
    19741 taaaaatgat tttttcatac cgagttcctt aaataaacta aaaataacgc actttgtaat
    19801 aaagtgcgtt tacttaggca gaaaaattga tagaaagttc atactttgat aaaaaaatgc
    19861 ctattagtta taactaatag gcatttaaac caattaattg tacttaacca ttggttgaac
    19921 gaggcgctga ctgcacttgg ctcactgcgc tggtatatcc gccaaaccct ttgccataga
    19981 aatagtattt agagttttgc cattggctaa tttcgactac ttcaagcttg tcacttggtg
    20041 cagaagcaat ggtcatagcg gcttgggtat gctcaacacg agagaatgta cctaatctgc
    20101 cgttaaatcg ataatcgctt tcgtaagttg attttggcac ttcaatcggg ttagtaacct
    20161 cttccacaat cgctggtgca accgttgctt gcgattggaa tttactgact cgctcatttt
    20221 tctctttaac taaatcacgt tcagaatgct gagcaacaac actaccaaat ggagcaatat
    20281 gctcttttac ctctactggt tttacgtctt cagaagcaac tttttcttct ttcggtttgg
    20341 aaagctgttc ttgcttctcc ttaaccaaat cacggttagt tgcttgtgct acaaagccac
    20401 ctagcggact aactgtatga agcttcttct cttctgattt tttctctgtc tcaacaagct
    20461 gattttcttg ctgttcaagc atttgatcaa cagataagaa tgatgctttt tcctctactt
    20521 tgacagtaga ggtaacctga acccaaactt taccgctcgc aagctcaggc gaagcaacag
    20581 ctgaagttag aggcatagga gaaataacct gattgcgttg attttcacga cgacgctgat
    20641 tgcccacacg caaatggcga ggtaaacggc gttggcggtt attttcacgt ccttcgttcg
    20701 ttgtttctac ctcaggagct gtttcaacag gtacttcttg ggttgcaagc ggttgaattt
    20761 gttgattttt ttgcacattt tcaacttgtt ttgccaccgt ttcctcaaca gcaggtgtta
    20821 gattttccac ttctacttct tgtgtttcga tacgcacttt tttacgtaga tcacggcgtt
    20881 ggcgacgttc agtttgaacc tcacgggagt tgctacgact ctcttgctcg gttacaccgg
    20941 aaacttcttc cactaccgct cggcgtgctt ttttctcgct acgcatcggt ttttcttccg
    21001 ctggagtagt ttgagcttgc ggagttttac gctcttgatt ttccgcttta gcattacggt
    21061 tcgggcgttc acggcgttgg cgacgctcac gctgattgcg tgctttcggc ttcggttttt
    21121 cttccacttt ttcttcacta aaccagcctt taatggtcgc aattaagcgg cttaacagcg
    21181 atggttttgg tggttcggtt ggtgttggcg aaggttggag attcagctcc gagctttgta
    21241 acactgactc taccgtaatc accggctcgt tacgggtaac cagcacatct tcttgatggt
    21301 gatgatgtgg gtgttcttct tcatgacgag cttcgtaatg cttggttaaa tcgtagctta
    21361 acgttggagt aatttcattt tcacgcaggc gatatacgct gaaatgcggc gtttccatac
    21421 tttcagacgg tactacaaca atttgtacat cgtggcgttt ttcaatgctg gaaatcgctt
    21481 tacgtttttc gttgagtaag tagctggcga tttgcaccgg cacaatggtg tgaacctgtg
    21541 cagtgttttc tttgattgcc tcttcttcta ataaacgtaa gattgacagt gcgattgatt
    21601 cattatcacg tactttacca gttccctgac agcgagggca gatatgcgat gaagcctcac
    21661 ttaatgatgg gcttaaacgc tgacggctca tttctaacaa accgaaacgg gaaatacggg
    21721 caaattggat tctcgcacgg tcttggcgtg tcgcctcacg aatacggttt tctacttcac
    21781 gttggtggcg aaccggtgtc atatcgataa agtcgatcac aatcaaacca cctaagtcac
    21841 gcaaacgtaa ctgacgggca atttcatctg ccgcttctaa gttggtgtta agagcggttt
    21901 cttcaatatc gccgccacgg gttgaacgtg aggagttaat atcaattgct gttaaggctt
    21961 ctgttacatc aataacgata gagccaccgg aaggtaaacg cacttcacgt tggaatgccg
    22021 attcgatttg cgattcaatt tgatagtggc tgaatagtgg tacttcgcct tcgtataatt
    22081 tcacacggtt gatgaaatcc gggcgaacaa ggcgaatgtg gtttttggct ttctcgaaca
    22141 cttttttgtt gtcgattaag atttcgccaa tatcacggcg tagatagtca cgaattgcac
    22201 gcacaatcac gtcactttct tggtgaatta agaacggagc tgggcgagat tccgccgctt
    22261 ttttaatcgc ttcccagtgg tgtaacaaga cttttaagtc ccattgtaac tcttccggcg
    22321 atttgccgac accggcggta cgaacgatta agcccacgtc ttccggtaca tctaagcagt
    22381 ctaaagcctc tttgagttct aaacgctcat caccttcaat acggcgggaa ataccaccgg
    22441 cacgagggtt gttcggcatt aagactaagt aactgcccgc aagcgaaata aaggtggtta
    22501 aggctgctcc tttgttacca cgctcttctt tgctgacttg aacaatcact tcttgccctt
    22561 cttgaataat atctttgata ttcgggcgac cgttaaacac atagtctgac gggaagtatt
    22621 ctcgggaaat ttcttttaaa ggtaggaagc cgtggcgttc tgcaccgtaa tctacgaatg
    22681 cagcttcaag gcttggttcg acacgggtaa ttttaccctt gtagatattg gattttttct
    22741 gttcgtgacc cgggctttca atgtccaagt caaataagcg ttgcccatca acgagggcaa
    22801 cacgcaactc ttctttttga gttgcattga ttaacattct tttcattgtg ttttctcatt
    22861 attttgtttt tgtcttacac ggtcattttg acccattaat aagggaatgg atttaatgtc
    22921 tatctcacga ctgtcttcat tcccgatagt gcattgatgg ttgtcttacg tttactttgt
    22981 cttgtcttaa agaaactgca aaatcaatca cttaaggctt gtttatctct attacaagcg
    23041 gttatttttg ctttattttt tgcaattttc tattgctttt tcaagccaaa aataacgagt
    23101 cattatcgca ttttaaccct gaaaaaggca aggtaattgt tgtatggtag ctgttatttg
    23161 ttgtggagat gaatataatg aaaatgaatg gggtgataag gaaaaataat gagatttagt
    23221 gtgagtgctg gagataagcg tgaaatccaa gcggttaaat ttgcaaaaaa agagctaaat
    23281 ttaaccgctt gtaaagcgaa tattatgctt ttgccgtcat ttttttcact gcttcttcag
    23341 tggtccagag gtcatttgcg ataatacggt agttggttaa tgctgcaagg tagccgtcac
    23401 cttcaggaat acgaggccct gcggttgcat ctttcaccac tgttacttca aaaccttgtt
    23461 cgattaattc acgcaagtgt gaatcaatac ataagttggc agccataccg gctaaaatta
    23521 cttggtcgat tttacgtttg cgtaattgca acactaagtc attggtttcc ggtccaaaga
    23581 ttttgtgtgg agaggtaatc actgttttgc catcaaaaat gtatggtttg tactcaggca
    23641 taaagtctgc acctgaattt tcaaagcctt ccatggtgta ttgacctttt ctcgcaaaca
    23701 ttccgctgtc gtgcataaag tgttcacccg gtgaaccaaa ttcccatttg tgatcagtcg
    23761 ggtaatagta gtgtggcgaa acaaaggttg gcatatcgac tgcttttgct gctttaaata
    23821 agctttcaat gttagctaca gtgttgtttt ctttaattga gtcacctaac acgccccaca
    23881 tcacgccttt cgggcctagg aagtcaattt gtggatcaac taccactaat gccacacgtt
    23941 ttggatcaat ggtcattcca tggcgtttta aaccgtattg ttccggctcg gcataaggtg
    24001 atttttctgc actggcttgt tttgcatttg ctgttgatgc aatacctaat gcacctaata
    24061 cactggctgc cattgcaata cgagagccgt ggttaagggc ttgacggcgt tcttggttga
    24121 tttcttcaaa ttgttcctgt gacatcattt tatcctcatt aatagatata caaattgtaa
    24181 tgataacttg cgttaccgaa cgggttgcta ttatagtgat cgcatttctc ctgttttaac
    24241 cgttcgtctc aattctttac ccaaggagct taatgtggat agtttgactc atctttttac
    24301 ccaatttcag tttcgcacgg atttatttca tctaggtcag ttatgccaaa tcgggagttt
    24361 taatgaagag aataaaggct atttacattt cgttcgtcag ggacgtttta ttttaaatca
    24421 ggctgccgaa cgcccgatta cgattgaacg cccagcgatt attttttcac caaccaatat
    24481 tttgcatagt ttgcacccgt tagatgatag tgggttagat atattttgta ttaattttga
    24541 ttttggcaaa gggattcgca acccattaac tcataccttg cacaatattg tgatcttaga
    24601 gttggcacag tatccggaat tgggggtatt agccgatcaa atttttagtg aagtgaatca
    24661 gaaagggtgt ggttatcagg caatgattca tcatttatgt gcctatttta ccttgaaagt
    24721 tgcccgccaa tgtttggaaa aagggtatat tcaaacaggt ttgttaaaag gcttggcaga
    24781 taagcaactg gggaaagtgc tgttagctat tcacaatgca ccagagcgag attggaatgt
    24841 agaggagttg gcaaatgtgg cattaatgtc tcgctcacgc tttgctgctt attttaaaca
    24901 aacgatgggg gtttcaccga tggattatct cactaactgg cgactagcgg ttgcccagca
    24961 tttattacaa aaagggatac cagtagcatt ggtggcagag caagtcggtt atagccataa
    25021 tgctgctctc agccgtgtct ttatgcggga attagggctt tcgcctaccg agtggctggc
    25081 tcaaaataaa gagtcgtaac ctgatgagaa acaaatagcc gaatggtaaa aatgtcaaaa
    25141 aatttaaccg cttgttatgt tgcacaagcg gttaaatgtt gccttaaatg ccaagagaat
    25201 cccaaatctc atcaatgcgt ttcaccacat tgtcatcttt ttcgatgggt gttccccatt
    25261 ctcgggtggt ttcacccgcc catttattgg tggcatcaat ccccattttt gagcctaacc
    25321 ctgcaattgg cgaggcaaaa tcgagataat ctatcggcgt gtgttcaatc agtgtcgtat
    25381 ctcgagccgg gtcacaacgg gtggtgatcg cccaaattac atctttccaa tctcgagcgt
    25441 tcacatcgtc atcgcacaca atcacaaact tggtgtacat aaattgacgc aggaacgacc
    25501 aaactcccat catcacccgt ttagcgtgtc cggcatattg ttttttcatc gtcactaccg
    25561 ctaaacggta agaacagcct tcaggtggca agtagaaatc gacaatttcc ggaaactgtt
    25621 tttgcaaaat cggaataaag acttcattca atgcttcacc taatactgcc ggttcatcag
    25681 gtggtctgcc agtgtaggta gaatgataaa tcgcatcttt tcgcatcgta atatgggtaa
    25741 cggtaaatac cggaaaatac tcttgctcgt tgtagtagcc ggtgtggtcg ccataagggc
    25801 cttccaatgc ggtttcttcc agatcgatat agccctccag cacaatttcg ctacttgccg
    25861 gcacttctaa ctcattggaa atagatttga ccacttcggt tttatgccct cgcaacagcc
    25921 ctgcgaacgc atattccgaa agcgtatccg gcacaggggt gactgccgct aaaatagtgg
    25981 ctggatctgc accaatcgca accgacacca gaaacggttt acccgggttt tcggctttcc
    26041 actcttggaa gtctaacgca ccgccacggt gggaaagcca acgcataatc agtttgtttt
    26101 tgccgataag ttgctgacga taaatgccta aattctggcg ttttttgtaa ggcccttgcg
    26161 taatcgtcag cccccaagtg accagtggag cgacatcgcc cggccaacag tgcataatcg
    26221 gtaatttgta gagatcaacc tcatcacccg aaatcaccac ttgctgacaa tcggctttgc
    26281 tcagtacctt aggcggcata tttaaaattt gcttccattg tggcagttgc ccgatcaaat
    26341 ctttaaaccc tttcggtggt tcaggctctt ttaaaaaggc aagtaacttg cccagctcac
    26401 gcagagcttt ggtatcttct tgccccattc ccagagctac ccgtttgggc gtgccgaata
    26461 aattacacaa caccgacatt tgatagcctt tcgggttttc aaacagtaat gccggcccgc
    26521 ctttgcgtaa ggtgcggtcg gcgatttctg tcatttctaa ataaggatcg atttcttgct
    26581 gaatacggac taattcaccc tgagactcaa ggaaatcgag aaattcacgg agatttttat
    26641 acttcatagc ggtcatattt ttcgattttt ttgcaagtat atagaaaaac gtaaatgaaa
    26701 aatacccata aaaaatttat agaaattttg ttttattttg ttagaatagc tcggttcaaa
    26761 ttaaatgcca taaggggaat tttatgttta aaagaacatt aatcggtcta gccgtgttag
    26821 gtgcaagtgt tgctcaagcg gatgtattaa ccagtattaa gcctttaggc tttattgcca
    26881 gtgccattac cgaaggggta actgaaacta aagtattatt accggtaact gcctctccac
    26941 acgattacag cttaaaacct tcagatgtga ctcaattaca atctgctcaa ttagtggttt
    27001 gggtgggtga cggcttggaa ggctttttag aaaaaagtat tgaaaaactg ccgagagaaa
    27061 aagtattaac ccttgaagat gttgatgcga ttgatgatat tgtcgataaa gcaagcaaaa
    27121 aagaagataa agacgatgat cacgatcata aacatgaaca taagcacgaa cacaagcacg
    27181 agcataaaca cgaagggcat aatcacgaag gacataacca cgatcatcac ggacatagcc
    27241 acgatgaaga ttggcatatt tggctctcaa gcgaggcaag tgagctggca gcagagcaaa
    27301 ttgcggcacg tttaagcgaa caaatgcctg aacacaaagc gaaaattgcg gaaaatcttg
    27361 caaaatttaa agcaaatcta accgctaaaa aagccgaaat tgcgaaacaa ttagagccgg
    27421 taaaagccaa aggttactac acattccacg atgcttacgg ctattttgaa agagaatatg
    27481 gtttaaattc attgggttca tttaccatta acccaactgt tgccccgggt gcaaaaacac
    27541 ttacagcaat caagaaaaac attgcgaaaa acaaagcaca atgtttattt gccgagccgc
    27601 aatttacgcc gaaagtaatt gaaaccttag caaaagaaac taaagtaaat gttggccaat
    27661 tagacccact cggtgcaaaa gttcagttaa gtgcgactgc ttaccctgaa tttttacaag
    27721 ttttggctga cgaatttagc caatgtttaa caaaataagt taaaaatccc ccatttaaat
    27781 ataaatgggg gattttgcga ttacatcact taagcttttt ttaagaattc tgatttcaac
    27841 ataattttac cgcaatcgac attatggtca ccttgagcta aacggattcc tttgaatttt
    27901 gtaccttttt tcagtacttc agacgagcct tttaatttta aatctttgat taataataca
    27961 tcgtccccgt cagataataa attgccatta ctgtctttta caattagcac atcatcatct
    28021 tgatccgttt cttcgcccgt ccattcatac gcacaatccg ggcaaacaaa ttgaattgag
    28081 tcgtggtaag tattttcgct tttacattca gggcaggttg ggtaaatcat tttaattcct
    28141 caaattaata aagaaccaga ttatataccg aaatccagca aaacgctaag cggtcatatt
    28201 ttgccgattt tttaccaatc gagctaaaag tcagttagaa tagccttaat tacacaaaaa
    28261 ggaggatact atgatagtcg atccgaatta tcagcaagaa ttagaaaaat acgaaaatcc
    28321 ggtaccaagc cgagagttta ttttaaatac aattcgtgaa cataacgccc caatgagccg
    28381 tgatgaatta ttgtcggctt ttcatattga cgatgaagaa cgaatggaag gcattcgccg
    28441 ccgtctgcgt gcaatggaaa atgacggtga attggtgttc accaaaggca aacgctatgc
    28501 gttgccggaa aaaatggatt taatcaaagg tacagttatc ggccatcgtg acggttacgg
    28561 ttttttgcaa gtggaaggac acgaaaaagg ggcgactaaa agcgaagatt ggtttattcc
    28621 caacgcccaa atggtaaagg taatgcacgg tgactttgtg ctggcacaac caaacggcac
    28681 agaccgcaga ggtcggaaag aagtccgcat tgtgcgagtg ttggaggccc gtaagaaaca
    28741 gattgtcggg cgttttttcc ttgaaagcgg tatcggtttt gttgtgcctg atgacagccg
    28801 cgttaaccaa gatattctca ttccggatga acaccgtatg ggggcgagaa tggggcaagt
    28861 tgtggtggtg gaattacagg aaagaaaagc gagttttagc cgcccggtgg gaatcattac
    28921 tgaaattcta ggcgataatt tagcgccggg aatggaaatt gaaattgccc tacgcaatca
    28981 cgatattccg cacatttggc cggaaggggt agaaaaacaa atccgccaat ttagtagcga
    29041 agaagtgccg gaagaagcca agcaagggcg ggtggatttg cgagatctgc cactgattac
    29101 cattgacggc gaagatgccc gagatttcga tgatgctgta tttgccaaaa aagagggcaa
    29161 cggctggcgg ttatgggtgg cgattgccga tgtaagttat tatgttcgcc caaaaaccgc
    29221 attagatttg gaagccctaa atcgtggtaa ctcggtctat ttcccgaatc gggttgtgcc
    29281 aatgttgccg gaagtgcttt ccaatggctt gtgttcactc aatccacagg ttgacaggct
    29341 ctgcttggtg gcggaaatgt cggtttccag caaaggggaa ttacaagatt atcaattcta
    29401 cgaagcggta atgaactctc acgcccgttt aacttacact aaagtgtgga aaatgttgga
    29461 aggtgatgaa gccttgcgtg aacgctatgc tccattagtg ccgcatattg aagaactcta
    29521 tgcaatgttc caaaccttaa tgaaagctcg ccataaacga ggggcgattg aatttgaaac
    29581 cattgaaaat caatttattt tcaatccgca agggcgaatt gagcgaattg agccgttaat
    29641 ccgcaacgat gctcataaat tgattgaaga atgtatgatt ttagccaata ttgctgccgc
    29701 tcgttttgtg gaaaaagcga acgaaccggc gttatatcgg attcacgata agccgagtga
    29761 agaaaaattg ctcagtttta aatcctttgt gcgtgagtgt ggcttaacct gggacgtagg
    29821 cttagatcca accccaaaag attacggtgt actactggag caaattgccg aacgtgccga
    29881 taaagagttg attcaaacga tgttgctccg ctcgctgaaa caagcagtgt atgcggcgga
    29941 taatatcggg catttcggct tggcattaac cgaatatgct cattttacct cgccgattcg
    30001 ccgttacccg gatttactgt tacaccgtgc aattaaatat ctgatcgaaa aaggcaaagg
    30061 caacactcgc tactataccg atggcggtgg ttatcactac aagttagatg atatggacga
    30121 attcggcgat aaatgttctg ccaccgaacg ccgagctgat gaggcaaccc gagaagtggc
    30181 agattggctg aaatgcgaat ttatgcaaga tcatcttggc gaagagtttg atggcgtgat
    30241 ttcgagtgtt accggctttg gcttatttgt aaaactcaat gagcttttaa ttgacggatt
    30301 ggttcatatt tcaacgctgg ataatgatta ttaccactat gatgcggacc gacaacgttt
    30361 aatcggtggc agtgggatca tctatcgttt aggcgatgca gttagagtaa aagtaatcaa
    30421 tgtgaattta gacgagaaaa aaattgattt tgagttactc accggtaata agaaaaccgg
    30481 caaaaccgcc aagaaaaaag caaaagcgac agaggttcct gttttcaaag agcctaaaac
    30541 ggtaaaaaaa gccaaaaaag tcgctgagaa aaaaccggca aaatctgcaa aaaaacggac
    30601 aaaaacgacc gctagtaaat caaggaaaaa atagcaaatg gattacaaaa aacaaatttt
    30661 attcagcctt ttatttgctt tagtaattgc aataataagc tattttttgt ttacctatat
    30721 cccgtttgat tgtagcgatc tgagcaaact caacgattca caacgtttag agtgccgaac
    30781 tgccgaattt ctgggcgttt attactggct gccgcacact accacgctgt ttttcggctc
    30841 ggtgttatta tattgggcgg tttatggcat gatttcatta gtgcaagcag tgctcaaacg
    30901 ctaacaagca gttttgtttt tgcaaaaagt tgcaaatctc atctgaataa tccttccaag
    30961 atcaaaggtc tatcaaaaaa gatagacctt tattgtgtaa ataaactaaa actccttgat
    31021 agatgtatca catatctata aaattccagc aattaagtgg gaaaaagtgg taaattgtgg
    31081 aacttttcct taaatttaac ctcatttaaa aaggtaaatc agtaaaatgt ttcgtggtgc
    31141 aagttcaatc agcattgata gcaaagggcg gatcgctatt ccgacccgtt atcgtgccga
    31201 gctattggaa aaacatcacg ggatcttagt ttgcactgtg gatatccgcc agccttgttt
    31261 gttgctttac ccacttcacg aatgggaaat ggttgaacag aaattgttgg cactatctaa
    31321 ttttgaccct gttcaacgcc gtattcagcg agtaatgcaa ggctttgcta ccgaatgtga
    31381 aatggattcg gcagggcgaa tactgcttag ccctacactt cgccaacacg cacaattaga
    31441 gcaacaaatt atgctggttg gacaattaaa caaatttgaa atttggcaag ataaacaatg
    31501 gcaagcacaa attgccgaag atcttgcttt tggcagttcg gcagaaattt tagactgcga
    31561 agcattgaaa aacctgtctc tctagtaatt ggaaattgag atgagcgaga acccaaaaca
    31621 tattacagta ttattgcacg aagcggttga cggcttggca attaagccta acggtatcta
    31681 tattgacggt actttcgggc gtggcgggca ttctcgcttg attttatcca aactgggcga
    31741 aaatgggcga ttaatcgcaa ctgatcgtga cccacgagcg atagccgaag ctcaaacgat
    31801 tagtgaccct cgttttcaaa ttgaacatac ggcattttct gccattcccg aactgtgtga
    31861 acgaatgggg ttggtgggca aaattgacgg tattttattg gatttaggtg tgtcttcccc
    31921 gcagcttgac gaagccgaac gaggctttag ttttatgcgt gacgggccgc ttgatatgcg
    31981 aatggatacc accaaaggct tatcggcagc cgagtggctt gcccaagttt cggcagaaga
    32041 tttagcttgg gtattgaaag aatttggcga agagcgtttt gccaaacaga ttgcacaagc
    32101 ggtcgtttct tacaataaat ctgcaaatga aaaaatcagc cgcactttgc agcttgcgca
    32161 aattattgcg gatgcggtgc cgtttaaaga taagcacaaa caccctgcaa cccgttcgtt
    32221 ccaagcaatt cgcattttta tcaatggtga attagacgag ctggaaaaag ctttaaattc
    32281 cgcattaacg gtgttagccc ctgaagggcg tttgtcgatt atcagctttc attctctaga
    32341 agaccgaatg gtgaaacagt ttgtgcgtaa gcatagtaaa ggaatggacg taccccgtgg
    32401 tttaccgatt ttagaagcag agctaaccaa aaatattccg ctgaaaacca ttggcaaagc
    32461 gattatgccg agcgaagccg aaattgaagc aaatgcccgc tcacgcagtg cggtattgcg
    32521 gattgccgaa aaacgctaac agtaaatagg gaagaatatg tcgaacgaac gttatccgtt
    32581 acatcaaatc atcattgatg atatctttag ccataacaaa gtggctcttt tattgttgat
    32641 tggtgtagtg atttcagcag tggctacgat ttggataacc caccagactc gtttatcggt
    32701 gagcgaacaa gggcaactga ttcaagcaaa ccaaaagttg gaaagccaat atactaatct
    32761 gcaattagaa gaaaacagca gaagcagtcg ggcaagagtt gatgccgccg ctaaatcgtt
    32821 cggattacag ccgattaaaa aagagcaaga aattatttta gttgaataaa aaatggttaa
    32881 atcagttaaa ttaaaacgta agcaagaagc ccctgtcgca aaagcagagc ctcaacaagc
    32941 agaaggtaaa aaaacaccga gttttttacc tactcgcttt agagtggttg tgttttttat
    33001 gctattaatg gttggtggct tactagcaca aaccgcctat attcagcttt ttgactctga
    33061 aagattaatt aaagaggcta ataaccgctc acttcgtact aaagaactcc aatttacccg
    33121 tggacgtatt ttagatcgta acgggcgttt tctctctatt agtgtgccaa tgtactcatt
    33181 aacacttgac ccgagagaat actttgatac taagctgcgt cgttctaacg aaagctggcg
    33241 tgccttagcg attgaaatgg aaacatcaaa aggtaaaatt gaggcaaacg ttaataaatt
    33301 tattgaaaag aaaaattttt caaaagaaaa agtagatttt gatccacgtt ctattttaaa
    33361 tactaaaagt gaaggttatt ggactcagct tgcccaagtt acaggtttgg attacaacag
    33421 tttaatagaa aaagtacgga ataaccctag ctcggttttt ttacgtttag ataacgaaaa
    33481 tttagtaaga gaacgccaga aattccaagc gttaagcaaa gaaatcggcc gttcctataa
    33541 tgacataatg gacgagcttt atagcaaaaa ccgccagcga ttcctttact tatcccgtca
    33601 tcaatctgaa gcgatcagcg aatatgcaaa agaactagat attgatgcat tagtgattaa
    33661 agtcgaatca cgccgttttt acccgctggc agaagaatct tcacagttga tcggttttac
    33721 tgataaagat gatatgcacg gttcggaagg gctggagcgt agttttgatt ccttacttat
    33781 cggcaaaaac ggtaaacaaa ttatccgaaa agatgccaaa ggcaatattg tggaaaatat
    33841 ccgttcggag aaacagtacg atccgcaaga tgttatgtta agcattgatg aagaattgca
    33901 gtctatggtg tacggtgaaa tcaaaaaagc ggtacaggaa aataatgcgg aatcaggcac
    33961 tgcggttttg gttgatgtgc aaaccggcga aattttggca atggcaaatg ccccttcatt
    34021 caacccaaac aaacgggata gttttaaacc tgaattaatg cgtaaccgtg ctattaccga
    34081 cacttttgaa ccgggttcaa cggtgaaacc ttttaccgta ttaaccgcat tacaaaatgg
    34141 ggtaacttat cgtgatgaag ttattggcac tcgcccattt gtcgtcaatg gacatacaat
    34201 taaagacgtt gctccaaggg acagccttac gcttaccggc atcttgcaaa aatccagtaa
    34261 catcggggtc agtaaattag ccctcagaat gccggcaaat gcgttagtgg atacttacac
    34321 gaaagtcggt ttcggtaaag acaccggttt aggcttgggt gaacaacgag gtacgaacgg
    34381 tgatcgcaaa cgttgggcgg atattgaacg tgctaccctt tcctatggat acggtttaaa
    34441 tgtgacccca ttacaacttg cccgtgctta tgcgacttta ggaagtttcg ggctgtatcg
    34501 cccactttcg attaccaagg tcgatccgcc ggtgattggc gaacgggtgc taccggaaaa
    34561 aaccacccga gatgtcgtgc atatgatgga aagcgttgcg gctaaaggcg aaggcggaca
    34621 ccgtgcagcg gtggacggct accgtgtagc catcaaaacc ggtacaatac acaaattaga
    34681 aaaaggtaaa tatgttgaaa aatatattgc ttataccgca gggcttgccc cggcaagcga
    34741 tcctcgcttt gcattagtgg tattaatcaa cgaacctaaa gcaggcaact attatggtgg
    34801 ctttgtttct gcaccactgt tctcacgcat tatgggttac accttaaaac aacgtaatat
    34861 taagccggat aacttaacgg aaaataccca aagtgccgtg cgtgaaatta aattagaacg
    34921 ccctatcaat taaggttagc tatgaaacgt ttactccctt ttctgacaga acttgatgct
    34981 tgggtggaag aactcaccga gctaaaacaa atgacacttg atagtcgcca agttcaagcc
    35041 ggtgatctct ttgttgcttt aaaaggacat caagtcgatg gcagaaaatt tattccgaat
    35101 gcgatagaac aaggagcagc aattattttg gctgaggctg atgaagatca accggaaatt
    35161 gagcttgatc cgaaatttgc aaaatttaac ctagatcgca ccgcttgttg caaggttgtc
    35221 tctgttccac gtctgccaaa attgctctct gaaattgcag gagctcttta ccataacccg
    35281 tcacacaagc tgactttagc cggcattacc ggcacgaacg gtaaaacgac tactgctcaa
    35341 ttattagcac aatggcataa tttattgggt gggaaatcgg cagtaatggg tactatcggc
    35401 aacggtttgt acggacaagt gcaagaagcg gtaaatacca ccggctctgc cattgaaatt
    35461 cagcataatc ttgcgaactt tgttgaactt ggagcggatt tttgtgcgat ggaagtcagc
    35521 tctcacggtt tggctcaatt tagagccgaa gccttggatt ttgatttagc gatctttacg
    35581 aatttaagcc gagatcacct tgattaccac aacacgatgg aagagtatgc ccaagccaaa
    35641 ttccgtctct tcaacgaatt aagcaccaaa gctcaagtaa ttaacgccga tgatgaaatc
    35701 gggcgtgaat ggctgacaca attaccaaat gcagttgcgg taagcaccga tccgaagttt
    35761 gcaggcaacc accaatttgt caaagccact gcggtaaaat ttaccctaca aggggcaagt
    35821 attgcgtttg aatcaagttg gggcaatggc gagttacata gccgtttaat cggggctttc
    35881 aatgtaaata atctgcttac cgcctttgcc ggacttttag ctcttggctt tgatattcaa
    35941 gaactggtta aaaccgcccc gaatttagtt ggcgtagcag gtcgaatgga atgcattacc
    36001 gctccaaata agccaatggt aattgtggac tatgctcaca cccctgatgc tcttgaaaaa
    36061 gccctacaag cggctcgttt acattgcgaa ggcgaacttt ggtgcatttt cggctgtggt
    36121 ggagaccgtg acgccggcaa acgcccatta atggcgacga ttgccgagaa attaaccgat
    36181 aaagtgattg ctacagacga caaccctcgc accgaagata atcaaaagat tatggcagat
    36241 attgtgaaag gttttagtaa accccaacaa attatccaca atcgtgaaga ggcaattaaa
    36301 accgccattg agcaagctaa agccacagat gtgattctaa tcgcaggcaa aggtcacgaa
    36361 gattatcaga ttattggcac agagaagtta catttttcgg atcaggaaac ggcaaggaaa
    36421 tatctgtttt aatgtcactt tctttgcaca agcaaagaaa agtgacagtg acaaatacaa
    36481 aatgctcgta attaatttta taaagaaaaa gataaatcaa tgataaaact aaccacccaa
    36541 caaatcgctg aaatcctaaa tgccaaattg atcggcaatg gcgaaactgt ggtagaaacc
    36601 accagcaccg acacccgaca agcggttgaa aacggcttat tttttgcatt aaagggcgag
    36661 aactttgatg ctcatcacta tcttcaaaat gcagtcgcac aaggttgtgt agcggttgtg
    36721 gttgagcgtg agtgtgaaat tgatgtacca caacttgtgg tggcagatac ccgtttggca
    36781 ttgggggaat tggcgaaatg gttaaaagct aagctgaacc cgaaaacggt agcgatgaca
    36841 ggttcttccg gcaaaacaac cgtcaaagag atgacggcaa aaattctgca aaaaatgacc
    36901 gcttgcgaac aggaagtgct ttatactttt ggtaacttaa acaatgactt aggtgtaccg
    36961 atgaccttgc ttcgcttaac cgaacagcat aaatatgcgg tcattgagct gggggcaaat
    37021 catatcggtg aaatcgctta taccaccgct atcgctcagc ctgatgcctg cttggtgaat
    37081 aatgtggctg cggcgcattt agaggggttt ggttcattag caggcgtggc acaagccaag
    37141 ggcgaaattt atcgtggctt gaaagaaaat ggcaaagcga ttgtcaattt agctttttat
    37201 tatccgcaat ggcaaaaaga gattggctca cgggaaatgc aatctttctc ttatatcggg
    37261 tcagattcgg attcttacgc agattactgg gcggaagatg tagaactgca tttaagcggt
    37321 tcacgcttta cgctacatac cccacagggc gaaattgcta ttgatctgcc ttatttgggc
    37381 aaacataacg tgagcaatgc cttagcggca acttcgctgg cgatgtctgt tggggcaacg
    37441 ctagaagcag ttaaggcagg gcttgagcag cgttcaatgg taaaagggcg tttgtatccg
    37501 gtgcaaatta acgaccactg tttgtttatt gatgacactt acaacgccaa tgtggattca
    37561 atgaaatcgg cgatttctgt tttggaaaat tatccggctt atcgtatttt tgcagtgggt
    37621 gatatggcgg aattgggtga agaaagtagc aaatgccacc aagaagtagc ggattttgcc
    37681 aaaaatgcag cattagattt aatcgtgagc tttggaaaag aaagtgcggt aatcagccaa
    37741 caggcagaac atcattttac cgataaacag caaatggttg atttcctact gccgattatt
    37801 ttgcaaaaaa tcgaacaaaa acaaccgctt gtattattgg caaaaggctc tcgtagccag
    37861 aaaatggaaa ccgtgatttc cgaattgtgt aaaccgttta acctaaattt ctaattattt
    37921 ttaaggacta agcaatgtta gtttggcttg cagaactatt ggttcaatat aacacagcgt
    37981 ttaacgttgt ctcttatatt actttccgtg ccattatggc gttattaact gcaatgggaa
    38041 tcgggctttg gatcgggccg aaagtaattc gccgtttgca gatcttaaaa tttggtcagg
    38101 aagtgcgtaa tgacggaccg gaaagccatt tcaaaaaacg tggtacgcca acaatgggcg
    38161 gagtgatgat tctcgcagcg attggggtga gtacattgct ttgggcagat ctgcgtaatt
    38221 cctatgtttg gttcacgctg tttgtgctat ttggctacgg tgcagtgggc tttgttgatg
    38281 attatcgtaa gatctctcgt aaaaataccg atggtttgat tgcccgttgg aaatattttt
    38341 ggttatctgc tatcgcatta gtggcggtgt ttggtatgta tgcggtgggt aaagataccg
    38401 ctgcaacaca attagtcgtg ccgtttttta aagatgtgat gccgcaactc ggtttatttt
    38461 atattgtgtt atcctatttc gtgattgtcg gcaccagtaa tgcggtaaac ctaacggacg
    38521 gcttagacgg gcttgcgatt gtgccaacta ttatggtcgc atctgccttt gcgttaattg
    38581 cgtgggcaac cggtaacttt aattttgcac aatatttaca tattcctttt attccaaatg
    38641 ccggtgaatt ggttatttta tgtactgcga ttgtgggagc aggtttaggg ttcttatggt
    38701 ataacaccta ccctgcacag gtgtttatgg gcgatgttgg ctcactttcg ctcggcggtg
    38761 cattaggcgt gattgcagta ttagttcgcc aagaattatt attggtggta atgggcggtg
    38821 tatttgtggt tgaagccctc tcggtgattt tacaagtagg ttcatacaaa ttacgccaaa
    38881 aacgtatttt ccgaatggct ccaattcacc accattttga actcaaaggc tggtctgaac
    38941 cacgggttat cgtgcgtttc tggattatca cgctaatgct ggttttagtc ggcttagtaa
    39001 cattgaaatt acgttaattg attgaataag gtgcattgag ataatgtacc ttatgttatt
    39061 tttaaattac agaataaatt atgcaaaaac aatacgaaaa caaaaccgtt actattatcg
    39121 gcttaggtac aacagggtta tcttgtgtgg atttctttaa gaaaaaaaat gccaatatcc
    39181 aagtgattga cacccgagca aacccagccg gagcggataa attggacgta actattccgt
    39241 tgcataccgg tgggttaaac agtgaatggt tgctgaaatc tgatcttatt gtaattagcc
    39301 caggtttagc cgttgccaca cctgaaattc agcaagcgat tcaagctggt gttgaaatag
    39361 tcggtgatgt tgaactgttt tgtcgggaag cgaaagctcc gattattgcg atcaccggtt
    39421 caaacggcaa aagtaccgta acgactttaa ctaccgaaat ggcgaagcaa gcggggatta
    39481 aagtgggaat gggtggcaac atcggtgtgc cggtattaag tttgctggag ggcgattatg
    39541 acctttttgt gctggagcta tccagcttcc agcttgagac aacttattca ctgaaagcaa
    39601 aagctgccac tgttttaaat attagcgaag atcatatgga tcgctacgat tcgattgccg
    39661 actatcgcca agcgaaattg cggatttacg ataatgcgga aaatatcatc gtaaacggtg
    39721 aagatgccca aacttacccg atacaagcgg tcaaaaaagt gattcgtttt gcagaacaaa
    39781 atgcggaata tagcctacgc aatcagatgc tttattcagg cgatgatgca attatccaaa
    39841 ctaaacagat gctgattagc ggccgtcata atgagatgaa tgcgttagcg gcgatggcat
    39901 tagcagaagc ggcgaatgtt cctcgtgaag gcattgtgaa agctttgcaa atttatggtg
    39961 gtttgccaca ccgtttccaa gcggtggcaa ccaatgatgg cgtgcgttgg gtcaatgatt
    40021 ccaaagcgac caatgtgggt agcacggtag cggcattaaa cggcttgaat attgccggta
    40081 cactttattt acttttaggt ggtgacggca aggctgcgga tttttccgaa ctcaaaccat
    40141 taattaataa gccaaatatt gtctgctatt gtttcgggca agatggagcg gcattggcag
    40201 aattaagcga acaaagtgtg ttggttgaaa cgatgcagca agcaattgaa gcaatccgcc
    40261 cacaactgaa aaaaggcgat atggtactgc tttctccggc ttgtgccagt ttagatcagt
    40321 ttaaaaactt tgagcaacgt ggcgaggtat ttatggcatt agcacaagga cagcacgcat
    40381 aatgttagaa agaattaagt cggaatggga taaatgggtc agattaaccc cttctaattc
    40441 actttatgac agaactctaa tttggctatt tttaggcctg ctaattatcg gttttgtgat
    40501 ggtaacatct gcttcactcc cagttagcac aaggttgaat aacgatccat tttattttgc
    40561 gattcgagac gggctgtata ttattgcttc aattatcttt tgttatgttt ttgtacaaat
    40621 cccaattgaa aaatgggaaa agcataactt ggcactgttt tttatttcaa tcggtttttt
    40681 aatcgccgta ctcattttcg gccgctcaat taatggtgca gtgcgttgga ttccgttggg
    40741 tattctcaac tttcagccgg cagaattagc caaattagcg gtcatttgct attttgccag
    40801 tttctatgta cgtaaatatg atgaaattcg taaagaaaaa gccagtttct ggcgaccggc
    40861 agtgatttta ttcttattcg gcttcttgct gattttgcag ccggatttag gtagtacctt
    40921 tgtattattt gttctcactt tctcaatgct tttcattgtg ggggcaaaaa ttatgcaatt
    40981 tatgttttta ggcgtggtgg gaacggtgtt atttgcggtg ttgattttaa cctcggaata
    41041 ccgtttaaaa cgtgttacct cctttatgga tccgtttgct gatgcttatg gcgacggttt
    41101 ccagctctcg aactcacaaa tggcatttgg acaaggtgaa ttttggggac aaggtttagg
    41161 taattcggta caaaagctag aatatttgcc agaggcacat actgactttg taatggcggt
    41221 tattggtgaa gaatttggtt tctttggtat tgcttgcatc gtacttttac ttattctatt
    41281 aacggtgaga gccttaaaaa tcagtaaaga atctttggtg ctggaagagc gttttaaagg
    41341 ctatatggca tttgggattg cgatttgggt tttcctacaa ggcttcgtaa acttaggggt
    41401 ggcatcaggt ttgctgccaa cgaagggctt aaccttccca ttagtgagtt atggtggttc
    41461 gagtttggta attatgtcga ttgcgattgc agttttgcta cgaattgacc acgaaaaccg
    41521 tgccgagcga atcgggcacg caaaaattaa aaccatctag ccgagcggtc tgcaacgtta
    41581 caatttgcaa aattttacaa aaatgagacc gcttgtatta gctggaaagc ataaaaattc
    41641 agtaaaatag cacgttttag aataaaaaag agttgaaaat ggcgaagaaa ttattagtaa
    41701 tggcaggtgg aacagggggg cacgttttcc ctgcaattgc cgtagctcga gagctacaaa
    41761 aacaaggctg gcaaatccgc tggctgggga cgaaagaccg aatggaagcc actcttgtgc
    41821 cgaaacacgg tattgagatt gattttattg aaatctcagg cttgcggggt aaaggcgttg
    41881 cagcattgtt gaaagcaccg tttgctattt ttaaagcggt gatgcaagcc cgcaaaatca
    41941 ttaaaaatta tcagcctgat gcggtgttgg gaatgggcgg ttatgtgtcc ggtccgggcg
    42001 gtattgcggc taaattatgt ggcgtgccgg tgattttaca cgagcaaaac gcagttgccg
    42061 gcctaaccaa tgtgtggcta tccaaaattg cccgcaaggt gttacaggct ttccctactg
    42121 cttttaaaga ggccgaagta gtaggtaatc ctgtacgtga agatttatct gctcttccgc
    42181 tgccgaatga acgtttcgcc aaacgaggct acccgattaa cattttagta atgggtggca
    42241 gccaaggggc aagagtgatc aaccaaaccg tgccggaagt ggcaaaagtg ttgggtaata
    42301 atgtgtttat cagccaccaa gtcggtaaag gtaatttagc cggtatcgaa gaagtctatc
    42361 aacaaaccgg caatgggatt gcttccgagt ttattgatga tatgaaagcc gcgtatgagt
    42421 gggcagattt ggtgatttgt cgttccggtg cgttaacggt gtgtgaaatt gccgccgtag
    42481 gtctgcccgc tgtgtttgtg ccgttccaac ataaagacag gcaacaattt ttaaacgcta
    42541 actatttggc ggcagatgga gcagcagtga ttatcgaaca gagcgatttc actccaaagg
    42601 cattacagca agccttagaa cccttaattg ccaatcgcca actcttattg gatatgtcaa
    42661 tgcgagccag agcaaaatcc accccaatgg cagcaaaacg tgtagcggaa gtgattattc
    42721 aagaagcgaa ttaacttact acaagcggtc gtttttggta aaaattttgc aaaatgtaac
    42781 cgcttgcgaa tagattaaaa ggacaataaa tgaaaaattt ccaagataaa gtcaaaaaat
    42841 tagtgcctga aatgcgtcgt gtcagccaaa ttcattttat cgggattggc ggagccggta
    42901 tgagcggcat tgcggaagtg ttattaaacg agggatacca aatttcaggt tcggatattg
    42961 cagacagagc ggttacacaa cgtctatccg cagccggagc gaaagtcttt atcggacacc
    43021 aagcagaaaa tattgctggg gcgagtgtgg tggtggtttc tactgcgatt gatgaaacca
    43081 accctgaaat tattgccgct cgagaagctc gaattccggt gattcgccga gcagaaatgc
    43141 ttgccgaaat tatgcgtttt cgccacggca ttgcgattgc aggcacacac ggtaaaacca
    43201 ctacaaccgc aatgatttca atgatctaca ccgaagcaaa attagatccg actttcgtga
    43261 atggcggttt ggtaaaatct accggcaaaa atgctcattt gggggcgagc cgttatttaa
    43321 ttgccgaagc cgatgagagt gatgcttctt tcttgcactt gcagccaatg gtgtcggtag
    43381 taaccaacat tgagcctgac catatggaca cctatggtgg cgattttgag aaaatgaaag
    43441 agacttacgt acgatttttg cgtaacttac ctttctacgg cttagcggta atgtgtgccg
    43501 atgatgaaac ggtaatggaa attgctcctc gtgtcggcag acaagtgatt acctatggct
    43561 ttagcgaaaa tgcggattac cgaattgaag attaccagca aaccggcttc caagagcatt
    43621 acaccgtagt ttgcccaagc ggtgaacgaa ttgatgtgct gttgaatgtg ccgggtatgc
    43681 acaatgcctt aaatgcaacc gctgcgttag cggtggcaaa agaagaaggg attggcaatg
    43741 aggcgatttt agctgcttta gctgatttcc aaggggcagg acgccgcttt gaccaattag
    43801 gttcatttat tcgcccgaac ggcaaaatta tgttagttga tgactacggc caccacccaa
    43861 ctgaagttga tgtaaccatt caagccgctc gttcaggctg ggaaggtaaa cgtgttgtga
    43921 tgattttcca accgcaccgc tattctcgta cccgtgattt attcgatgaa tttgtacaag
    43981 tactgtctaa agtcgatgcc ttgattttat tggatgtgta tgctgccggc gaagctccga
    44041 ttgtgggggc agacagtaaa gccttagccc gttcaatccg taatttaggt aaggtcgatc
    44101 cgattttggt ttcagatacc gatcaacttg gcgaggtatt agatcaaatt attcaagacg
    44161 gtgatttaat tttggcacaa ggtgcgggca gtgtaagccg catttctcgt ggcttggctg
    44221 agagctggaa aaattaaata ctctctcccc ttgcgggaga gagaccgaaa aatacttcgt
    44281 tcagaagtat ttttcagaga gagggtatat atttaaagga tttcaaatga gtattaaaaa
    44341 cgaaaaaatt gccgtcttat tcggtggcgt ttcgcaagag cgtgaagttt cactgaattc
    44401 tggtgcagcg gtaacagctg cattaaaaag tttaggctat aacgtagaag gcattgatac
    44461 taaagaattc ccgattgaaa aattaaaaga aaaagggatt cagcgtgtat ttaatatttt
    44521 acacggcggt attggcgaaa atggcgtact gcaaggtgcg ttagagcaaa tgggtattcc
    44581 ttacaccggt tgtggcgtaa tggcatcagc agtgacgctg gataaattcc ggactaaatt
    44641 attatggaat gcagtaggtt taccaacagc ggatatggtg gtggttcagc gtggacaagc
    44701 ggtcgatttt gaccaaatta ttgcaaaatt aggcttaccg gtatttgtga agtcttcgtg
    44761 tgaaggctca agtgtgggtg tattcaaagt aaaaaccaaa gaagaattgg caccggcaat
    44821 tcacgaggca ttaaagtttg attccattgt gttggtggaa gaatttttag ccggtaatga
    44881 atattctgta ccggtattag acggacaagt tctaccggcg gtacaagtaa ttccggacgg
    44941 cgaattttat gactaccacg caaaatatgt gtcggataac acccaatatg tagtaccggc
    45001 attaaatgac gaacgccaag cagaggtcgc caaattagtg aaagcggctt acgatgtggt
    45061 tggctgtcga ggttggagcc gtattgatgt gatggaagat ggcgaaggaa aattccgctt
    45121 ggttgaagta aataccaacc cgggaatgac cagtcacagt attttcccaa aatcagcagc
    45181 aacagttggt atttcctttg aaaaattagt tgaacgcgta ttggagttaa gtgcttaatg
    45241 ggcatcttcc gcaagaagaa cagcacaaat gtgcgtttga atgttcttaa tccaaaaaca
    45301 cctgtttctc cacgtaaatg gctagtattc attaagccat taattgtgtt attatgtaca
    45361 ctatttgtat tcggtgtgta tagtaattgg caaaatatac tcgaaagttg ggataaaaca
    45421 ccgattcgcg cttatgcatt aacacataaa acacaattta caacaaatgc agatattcgt
    45481 gaaactttgt ctaaagaacc tgctctaaaa ggatatttcg gacaaaatat tcaagaggtc
    45541 aaagataagc ttttatctat accttgggtt aaagatgtgg ctgttcgtaa actttatccc
    45601 gaccgattaa gtattacttt gctagaacat aaacccgttg caatttggaa tgatactaac
    45661 tttgtctcag aacaaggaac cgtctttagt ttaccgaaag acagaatcga taaaaatgga
    45721 cttccattac tctatggtcc agatacggaa ggaaaaagtg tattagaggc atggaataaa
    45781 atccgagctg atctaaatgc ccgcaacttg gatttaacct ccgtttctgt agataatcga
    45841 ggttcttgga caattaggct ttctaatcaa gtagaattaa gattaggaag aggggaatgg
    45901 acttctaaaa ttgatcgttt tgtaataatc tttcctgaaa ttcatatacc tgaaggtaat
    45961 agattagctt atgttgattt acgttatcca catggcgcgg cggttggatt tagtcctata
    46021 aaaaattaaa ctcagtgaac acaaaaacat tatgacaaaa gcagtagaat caaaaattat
    46081 cgttggtctt gacattggga catcaaaggt tgttgccgtt gttggtgaag tattacctga
    46141 tggtgtaatt aatgttatgg gagctggcgt ttgcccttct aaaggagtcg atcgaggtgg
    46201 cgttattgat cttgacgctg ccgttaattc tattcaaaga gccattgagc aggcggaatc
    46261 tattgccgat tgtcaaatta tgggtgtaac actggcaatc tcaggtcagc atattgttgg
    46321 tttaaatgaa gcaggatcat caacattatc tggaggtatt gttacccaag ataatattga
    46381 aagtgctgtg gatatggcaa aggcaattaa attacaagat ggcttagaaa cattacacat
    46441 gattccacaa gaatatcacg tggatagatt gcctgcgact aaaaatccaa ttggcttatc
    46501 gggtatgcgt ttacaagttc aagcacactt aattgcttgc catcaagctt ggttaaaaaa
    46561 cttaaaaaat gcggttgaac atgctaaatt aaaagtcgat caagttgtat tttcaggtct
    46621 tgcctctagc tattctgttt taactgaaga tgaaaaagag ctgggtgttt gcttaattga
    46681 tattggtggc ggtacgatgg atgtactagt ttataccgat ggagcattaa gatacagtaa
    46741 agtcattcca tttgcaggta ataacattac tgattatttg gctcgtgtat ttacgacatc
    46801 tcgccctgaa gctgaaagcc ttaaagtagg ttatggtagc gcaatttcgc ctccaaccca
    46861 taattcagat aaaaaaattg aggtggcagg actaggtgga cggatggcaa gaacctttac
    46921 ccgagctcag gtggcaacgg ttacctcaca atgttataac gatttgctaa aagttgttga
    46981 agaggaatta acccaattac gccatgaact tttccaaaaa ggaataaaac aagagttaat
    47041 tgccggtgta gtcattactg gtggtggctc acaaattgaa gatattgtag aatgtgctaa
    47101 atcaattttt ggttcacaag ttcgtgttgg atatccactc aatattactg gcttaaccga
    47161 ttatgtgaat aaaccacaat atgcaacagc attagggctt ttacaatata gccactataa
    47221 ttatactgaa caaggtacaa gtacagattc taatgaagat atctttgctc ctattggtcg
    47281 tggaaccaag aaaatcattg acttcttcaa atcaaaattt taatagtgtt aaaataaaca
    47341 cgcagggaga taaaaatgtt tgaacctatt attgaacaaa cgcaagatgc tatcattaag
    47401 gtagtgggtg ttggtggcgg tggcggtaat gccgtagaca gaatgtctcg ctctgccgat
    47461 gatattaaag gtgttgaatt ctttgatgta aatactgatg ctcaagtttt aagaaaaaga
    47521 accacacgcc aaactatcca aattggagca agtacaacta aaggtttagg tgcaggtgct
    47581 gatccaatgg taggaaaaca agctgccgaa gaagatcgtg aggctatcgc taatgcatta
    47641 aaaggtgcaa atatgacctt tattgctgtt ggtatgggtg gaggtaccgg taccggagca
    47701 gcccctgttg ttgctcaaat tgccaaagag caaggctcac taactgtagg cgttgtaaca
    47761 aaacctttcc gcttcgaagg gcctcgccgt atgcgctttg cagaccaagg cattaaagag
    47821 ctttctcaat atgttgattc tcttattata attcctaatg ataaattacg tggtttaggt
    47881 aagcaaacaa cagcagtaga tgcctttgcc gcagcaaatg atgttttaag taactgtgtg
    47941 cttggtatta ccaatatgat taccagttcg ggcggttcta ccggtgcaga tattaacgtg
    48001 gacttcgcgg atgttcgtac agtaatgtct ggtaagggac acgctatgat tggtacaggt
    48061 tttgctgaag gtgaagttgg tgaaggacga gcggaaaaag caatgaatga tgccatttct
    48121 agtccattac ttgaaaatgt ggatatttca ggtgcaagtg gtatgctcat caacattagt
    48181 gctgggacag atttcttatt agaagaagtt tatgctatga tggacttaat ttatggcttt
    48241 gcaacagaag atgccgcaat tgtatttggt tgtaactatt accctgaaat ggatggaaaa
    48301 gtgagtgtca ctcttgtcgc aacaggaata ggccaacctg aggaagctct acatatgcca
    48361 cataaggctc agccagtata tgcacagcaa ggaaatcatg ttcaagctac acagcctact
    48421 cagccaaacc atgcggtaca acaaccaaac tttactcaac cgtcaagtta tggtcagcca
    48481 aatcaattta gtggtcaacc acaaccacta caacaacctg tggctccaaa accacaatcg
    48541 gttgatacag cacaaatttt taacccaaat tcaattccgg gttttatgag aaatagtcaa
    48601 taacttccac tcatttcgga agtaaggaca aaatatgact aaacaaagaa cattaaaaca
    48661 agcagcaaaa gtaacaggta ttggcttaca tagcggcaaa aaagtaacct taacgttacg
    48721 ccctgcccca gctaatacag gagttattta tgcccgtacc gatttagagc ctgtcgttta
    48781 tttccctgca agcgcagact ctattcgtga tacacaatta tgcacatgta tggtaaatga
    48841 tgatggtgtt cgtatttcaa cagtagaaca tttaaacgca gcaatgtcag cattaggctt
    48901 agataatgtt attgttgaag tagatgcacc tgaaattccg attatggacg gtagttcaag
    48961 cccatttatc tatcttttat tagatgccgg catcgaagaa caagatgcac cgaagaaatt
    49021 tattcgcatt aaagaaacag tacgcgttga agaaggcgat aaatgggccg aattaaaacc
    49081 atacaataaa ggttttaaat tgaacttcac tattgacttt gagcacccat taatccccaa
    49141 aaatgtaggg agctattcca ttgatttttc tgctgagaac tttattcagc aactaagtcg
    49201 agcgagaacc tttacattta tgaaggatgt agaatacttg caatctattg gtcttgcatt
    49261 aggtggaagc cttgataatg ctattgtatt agatgattac cgaattctaa atgaagacgg
    49321 tttacgattt aaagatgaac tggttcgcca taaaatgctg gattcgatag gtgacttata
    49381 tatgtgtggt tataatatcc taggtgaatt tagtgcatat aaatcaggtc atggcgttaa
    49441 taataaatta ttaagagctg tattggaaaa taaaaacgct tgggagtttg ttacctttga
    49501 agataaagca gaagtcccac aaggttacca agtacaacaa gaaattttta tttagtctaa
    49561 atggcttaaa agacgaacag aaatgttcgt cttttatttt gcaaattttt tctaatattt
    49621 aaccgcttgc aacccgcctc attagcgatt ttttcgccct tatctattta ctgtttaaaa
    49681 aaacagttgt actatatacc catacagtta atcttgtgtg gtgtattatg cttactcaac
    49741 ttactattaa taattttgcg attgttcgcc atcttattct tgaattaaat gaaggtatgt
    49801 ctgttattac cggtgaaacc ggtgccggga aatcaatcgc tattgatgcc ttagggctat
    49861 gcttgggtta tcgttctgaa agtgggatga ttagaaacgg ttcggacaaa gcagatataa
    49921 gtgcaacctt tactatgcag ccacatagcc ctgcttattt atggctacaa gagcatgaac
    49981 tgcttgatga agataatcct caagagtgta tcttacgccg tatgattaat attgatggac
    50041 gctcaaaagc ctttgtaaat aaccgatcat tacctgtttc acaacttcga gagttggggc
    50101 aatatcttat tcatttaaat gggcaacacg caccacaatt actcctaaaa aacgaatatc
    50161 aacttgaaat agtcgatcat tatgccacgt tacagcctct attgatgaag atggcaaagc
    50221 aatatgggaa ttggaaagaa ctgaataagc aggtaaaaaa tttccaaaaa cagtgccaag
    50281 aaaatgaagc tcgcaaacag ctattagaat atcaagttga ggaattagat gaatttgcaa
    50341 ttaaagcaaa cgaatttgaa gaaatggaag agaaatacaa tatcttgtct tcttccgagg
    50401 agcttactga gctttcagat gaaatcacac gcttattaag tgatgatgaa atcaatgcaa
    50461 acagtctgat ttataaagcg ttacgcaatg cagaaaactt ggctgaggtt gatagccaat
    50521 atcagggcat tttagatatg cttaatgagg ccctgattca gattcaagaa gcaagctccg
    50581 aagtggctca attagccagt aaaattgaac aagatccgga attactacag gagctggata
    50641 atagaattgc acaaactata tcgttagcac gcaaacacca tattcaaccg aatgaattat
    50701 ggcaatatca cgcgacatta aaagcagaac tacaggaatt actggatttt gaagataatg
    50761 aagaacaact cattcaaaat gaaaaacaag cttaccaaga gtgtataaca ttagcagaag
    50821 aaatttacca aaaacgtcta gatgccacac ataagctctc tgaacaagta acaaaacaaa
    50881 ttaaacactt agcaatggaa aacggtgagt tctttattca tatagaacat aatcttgaaa
    50941 aaatgtctgc aaatggtgct gactatgtcg agtttaattt acgcagcaat ttaggacaac
    51001 aaccccaacc actggcaaaa attgcttctg gtggtgagct atctcgcatt tctctggcag
    51061 tacaagtgct taccgcaaat aaactttcta cgccaactat tatttttgat gaagttgatg
    51121 ttgggattag tggctctgct gccactacag tcggaaagct actgcgtaag ctaggcgaaa
    51181 aatgccaagt attatgtgta acccatttac ctcaagtggc aagttacggc aaccagcagt
    51241 ttaatgtaca aaaatatgta gaaaataatc aaactgaaac gcaaatgaca ttactcacag
    51301 aagcagagcg tattcacgcc ttggctcgac tattaggcgg aagcgaaatc accgaaacgg
    51361 ttttagctaa tgcaaaagaa atgctaaatt tagcgaaaaa taacgaatag ccaaaaagaa
    51421 aaatcgcatc aatgaatatt gatgcgatta tgaatttggt ggaggtaaac gggatcgaac
    51481 cgatgacctc ttgcatgcca tgcaagcgct ctcccaactg agctataccc ccttaataca
    51541 agcggaataa tatgctttcc gcttgaagat gtcaatggct ttaatcaagc aaggtgttga
    51601 ttgattaaaa actagctatt cgcctgaata aactcaatcg ctttttgtaa gcgagctaag
    51661 gttctttctt taccgactaa tttggcggtg atatccattg acggcgattg cccacttcct
    51721 gttaccgcta aacggaacgg cataccgact ttgcccatac caatttccag ctcggcagcg
    51781 gtttggttca ttgcctcgtg gatattttcc accgtccagt cattgcaagc ggtcaatttt
    51841 tccaataatt ttgcaagtgg agcaacggct tcggctttga agtttttagc agcagctttt
    51901 tcgtcgtaag ccttaaattc ttgatagaaa tagcggctgc tttcggcaag ctcttttaag
    51961 gttttgcaac gttcgcccag tacagggata atttcttcca attttggacc gcttgtgaaa
    52021 tcaatgcctt gagtttgcat atgccattca agatgttttg ccacataact tggggcaaga
    52081 ctgcggatat agtgttggtt caaccattgt aatttttcag tgttaaatgc acttgccgat
    52141 ttactgactg aatgaatgtc gaacagctcg atcatttcgt cacgagagaa aatctcttgg
    52201 tcgccgtgtc cccaacctaa acgcacaagg tagttaatta aggcttccgg tagatagccg
    52261 tcatcacgat attgcattac gctcaccgca ccgtggcgtt tggagagttt ttgcccgtca
    52321 tcgccgttga tcattgaaac gtgggcgtag gttgggattg gtgctcctaa tgctttcaaa
    52381 atgttgattt ggcgtggtgt attgttgata tggtcttcac cccgcacaac gtgagtaatg
    52441 cccatatccc agtcgtccac caccacacag aaattgtagg tcggcgagcc gtcagtacgg
    52501 cgaataatca agtcatctaa ttcgctattg gcgatttcaa ttcgcccacg caccgcatcg
    52561 tcaaatacta ccgagccttc ggtcgggttt ttgaaacgca caacatgtgg ttggctcggg
    52621 tcgttttgcg gattgtgtaa gcagtgctga tcgtatttcg ctttctcttt atttgcttct
    52681 tgctctgcac gtacttcgtc taaacgttct ttcgagcagt agcaacggta tgccgtgccg
    52741 gcttctaaca tttggtcgat cacttggtta tagcgatcga aacgcttggt ttgaaagtat
    52801 gggccgtgtt cccacgccaa atccagccat tccataccct ctaaaatagc ggcggttgcc
    52861 tcaggggttg agcgttcaag atcggtatct tcaatacgta acacaaattc accatcatta
    52921 tgcttagcat ataaccaaga gtagagcgcg gtcctcgccc cacctacgtg caagtagcca
    52981 gttgggctag gtgcaaaacg ggtacggact tttacattcg gatctaaggg gaaaagggtt
    53041 tcaattttca ttttatattg cctaattgat gattcttaag aaaaacttgt ctattttact
    53101 acgcttgagg gtgaatcata gtaaaaaatt aaatttgcgg ggtaaaaaat cagcaaacgg
    53161 ggtaaaaaga acaaaaaggg tttgacgaaa cagcaaaaat ctctataatt cacttccaca
    53221 acagcgggcg attagctcag ttgggagagc acctccctta caaggagggg gtcactggtt
    53281 cgagaccggt atcgcccacc acttcaactt aagtgtttcg ttgttgtatc acaatctaat
    53341 tttgaaaacg ggcgattagc tcagttggga gagcacctcc cttacaagga gggggtcact
    53401 ggttcgagac cggtatcgcc caccacttca acttaagtgt ttcgttttca aattcccttt
    53461 gattttaagt ctcaagtggg cgattagctc agttgggaga gcacctccct tacaaggagg
    53521 gggtcactgg ttcgagaccg gtatcgccca ccacttaaga ctaaaatcat aaacttcaaa
    53581 tggcgatttt tcgtatctga agggcgatta gctcagttgg gagagcacct cccttacaag
    53641 gagggggtca ctggttcgag accggtatcg cccaccatct atttagtatc aaagcctaaa
    53701 acttatatca taatctaata acccctttaa agtcataact aaaaagggaa aataaattca
    53761 gatggcctgt tgcatctgca taaatgcctt tctacgtgca gaaattaatc tttttctatc
    53821 tttaatttgc ttaatttgac gcaggcgtaa tttccttgtc agtagggatt tctttttctt
    53881 caattttctc ataagaagaa ttctcctgtt ttatttgacc atctggtaaa ttttcttgtt
    53941 cttgcatctt ttgctcttca actcgttgat aattaataat actaccataa taacgccgta
    54001 tattttcaac atactgtaat gcttcatatc ctcgagcata gccgtatttt agattagcat
    54061 aataacgttt ttccgcaagc aatggcagat tctttttaac atcaagccaa ttatccggat
    54121 caccaccaag ttgttttgtt aatcgacgaa gatccaacaa gtgccccaat cccatattat
    54181 acgctgctag gctataccaa attctatctg cttgaggaat agtttccggc atttgtctca
    54241 ttagcatatg taaatattca gatcccgctt tgatactttg tgcagggtta gtcctatcag
    54301 aaattttcat tctatctgcc gtatcttttg tcagcatcat aattcccctc actccggttg
    54361 gagaagttgc attaggatcc caatgagact cctgataggc gatagccgcc agcatttgcc
    54421 attctaattc acctttatgt gcccgaaaaa ggggttcata tttaggtaaa atagttttaa
    54481 ttgcattcaa atagctctga atatcaacat aatcaaactt agctaaatga ttaaaatatt
    54541 tctcttctat tcttgatatc agcccagttt ccatagaata agacataaaa tccagcagca
    54601 cagattgcag ttcactataa gaactatttg ctaaatacca taacactggg ttttcatcag
    54661 ttaaatcaaa ccctacggct aaattaggat taatatgctg tgcagcagaa atatcaaccg
    54721 acattgcaat tgtatgtgaa atttcacctt gtgcgacttt taacaatagc tcttcttgtg
    54781 taaatttatc cgagatctgc cattttagtt ccggattatc caccttaagc tgatttaata
    54841 ttggaattac cgcagaaccg gctggaataa tcacattttc ccgcaaatcg gaaagtcgat
    54901 atggtctagc acttcccttt ttataaacaa gctgccaaga agccgaataa taggaaggac
    54961 ctatctgaaa ttcatcgttt aattcagaat ggtaaagcag cccagcggca gcaatatcaa
    55021 catcattatt tcttaaggcc tcaaacaatt tctcgctact atcataagtt ttaatatcaa
    55081 gattgacctt taaatattga gcaaaggctg ttgctaaatc atattcaatg ccactttttc
    55141 cttcaggacc aacaaagtaa gaaagtggat ggttgatcat tccaaccttt aacgttttgc
    55201 tttgctgaat ttgtgtataa tgatttgctt ctgaatgaat gattttttgc caaggaaaaa
    55261 tcatatccca agcccacagt aacaatgcta cggcaataaa aaggcgagca attaatcctt
    55321 tcaatttaaa atcctcatta tttcaagcta agcattaagc ctatctgaaa ttacaaatta
    55381 acggaataat actttatagt ttaattattt attaaaaaaa taaaatggga atataatgg
//
LOCUS       DANLXO010000003        53166 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.003, whole genome shotgun sequence.
ACCESSION   DANLXO010000003 DANLXO010000000
VERSION     DANLXO010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 53166)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 53166)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..53166
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.003"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..212
                     /locus_tag="PXD69_000120"
     CDS             <1..212
                     /locus_tag="PXD69_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282367.1"
                     /translation="KYVVGTGDDTDGEVTNFVIITSEYKYIDAQSAKEITDAPLTKED
                     IGKTPTQIMLGRIYKYLKETGQIVV"
     gene            361..431
                     /locus_tag="PXD69_000121"
     tRNA            361..431
                     /locus_tag="PXD69_000121"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:389..391,aa:Arg,seq:tct)
     gene            complement(591..1889)
                     /gene="purA"
                     /locus_tag="PXD69_000122"
     CDS             complement(591..1889)
                     /gene="purA"
                     /locus_tag="PXD69_000122"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDL6282368.1"
                     /translation="MGKSVAILGAQWGDEGKGKIVDLLTDRVKYVVRYQGGHNAGHTL
                     IINGEKTVLRLIPSGILRDNVTCLIGNGVVLSPEALMKEMGELEERGINVRERLKISE
                     ACPLILPYHVAMDHAREAALGKNKIGTTGRGIGPAYEDKVARRGLRVSDLFDKEHFAA
                     KLKDILDYYNFQLVNYYKVEAVDYQKTLDDVFAIADVITGMVADVTTLLHEARENGDN
                     ILFEGAQGTMLDIDHGTYPFVTSSNTTAGGVATGSGYGPRHLDYVLGIIKAYCTRVGS
                     GPFTTELFDDVGAEIARKGNEFGAVTGRPRRCGWFDAVAVRRAVQINSISGFCMTKLD
                     VLDGFKELKICVAYKMPNGKIVEYAPLAAKDWEGVEPIYETMPGWSENTFRVTKREDL
                     PQAALDYIKRIEELVGVPVDILSTGPDRVETMILRDPFAA"
     gene            complement(2063..2950)
                     /gene="hflC"
                     /locus_tag="PXD69_000123"
     CDS             complement(2063..2950)
                     /gene="hflC"
                     /locus_tag="PXD69_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HDL6282369.1"
                     /translation="MRRLLVPILAVVAFVVLQAITIVNEGERGIMLRFNKVHRDSDQK
                     VVVYEPGIHFKVPFIDSLKVLDARIQTLDGQEDRFVTVEKKDLLVDSYVKWRISDFGQ
                     FYTSTGGDYQKAADLLRRKVGDRLRSEIGSRTIKDIVSGSRGELMAGAQKALNAGEDG
                     AERLGIEVVDVRVKQINLPNEVSSSIYQRMRAERDAVAREHRSQGNEKAEVIRAEVDK
                     KVVLILANANKTAQALRGEGDAQAAKLYSEKFGNEPEFYSFIRSLKAYEDSFAEGQNN
                     MMLLKPNSEFLRFMQAPTK"
     gene            complement(2953..4176)
                     /gene="hflK"
                     /locus_tag="PXD69_000124"
     CDS             complement(2953..4176)
                     /gene="hflK"
                     /locus_tag="PXD69_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HDL6282370.1"
                     /translation="MSWNESGNQQDPWGKPGQKKAEPKPEQQEQGSQQEPTNNQRNEQ
                     QPPDLEEVFSSLLKKMGGGKGPNNSSNQPSASLGKFLPVVLGLAAVVWVGSGFYTVQE
                     AERGVVTRLGKLNDIVLPGLNWKPTFIDSVTRVNVERVSELNTSGSMLTQDENMVQVE
                     MTVQYRVEDPAKYLFSVSNPDDSLKQATDSALRYVIGHMTMDEILTTGRATVRERTWS
                     TLRDIIKTYDMGLLVTDVNFQYARPPEEVKAAFDDAIKAQEDEQRLIREAEAYARGEE
                     PIARGQAQRTIEQAQAYKEAVVLNAKGEVERLSQLLPEYKASPELTRERLYIQTMEKV
                     MKNTPKVVMDSSGNNLNVLPFDKLMNSSSVIKAEQPAAAQVVTPQVVQPQVQPRTQIQ
                     PQQAEQQEPTRKGRF"
     gene            complement(4347..4676)
                     /gene="trxA"
                     /locus_tag="PXD69_000125"
     CDS             complement(4347..4676)
                     /gene="trxA"
                     /locus_tag="PXD69_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018357021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDL6282371.1"
                     /translation="MSNVIHTTDATFEQDVLKSDVPVLLDFWAPWCGPCRMIGPVLDD
                     LSVDAQFDGKVKIVKMNVDENPSVPAQFGVRSIPFLLLFKNGEVIAQQVGAIPHAQMA
                     EFIKQAL"
     gene            complement(4931..5602)
                     /locus_tag="PXD69_000126"
     CDS             complement(4931..5602)
                     /locus_tag="PXD69_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDL6282372.1"
                     /translation="MKKSTLAIILGGALLTGTAVAHQAGDVIFRAGAVHVKANSSSDA
                     KSKAATGIDVDLEVKNNTQLGLTATYMLADNVGIELLGATPFSHKINAKAKVLESGAE
                     VDLDRVVILKQLPPSLYAQYYFFELTAKVKPYVGAGLNYTRFYHAKSVSPAVTDLSVK
                     KHSFGPVANLGVDVKLTDNIYFNAAAWYTRIKTTAKFKAAGADHEVKVKLDPVVLFAG
                     FGVKF"
     gene            5857..8424
                     /gene="clpB"
                     /locus_tag="PXD69_000127"
     CDS             5857..8424
                     /gene="clpB"
                     /locus_tag="PXD69_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDL6282373.1"
                     /translation="MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALLKQEGG
                     SIASLFTTLNVDVPTLIRELQQILDRLPKVQGGNTQVSQQLVRLLNQSDKLAQQFGDS
                     FISSELFVLAALDDNGDLGKLFKQFGLNKEKLTQAISQIRGGDTVNNQNAEDTRQALK
                     KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA
                     QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFID
                     EIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKV
                     LVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI
                     DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKE
                     REYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYGVIPNLE
                     KQLQAVENGEKNADAQLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLRMEEVLH
                     ARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDD
                     PDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAH
                     PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVVKEMVM
                     EVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAAL
                     DHIGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKAVTVDYQNGQIVATQ"
     gene            8638..9780
                     /locus_tag="PXD69_000128"
     CDS             8638..9780
                     /locus_tag="PXD69_000128"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDL6282374.1"
                     /translation="MSQLFPEATIRTQAPYRNDIVGSFLRTDALKKAREDFNQQKITR
                     DELREVTRQEVKKLVELQKQHGVKAVSDGEFSRTWWHLDFLAELDGMDWQETEVFNVN
                     FTGHKPKGQTVKIVGDIDFSESHPFVDAYRLLKEAAGDYPTKFTIPAPTMLHIICCVR
                     AEDYQPLPQYQDEQKLYDDIANAYIKAMHKFYDMGLRNLQLDDTSWGQFCAEDKRKEF
                     AARGFNLTDLAEKYVALLNRIVDAKPADMSITMHICRGNFRSSWFSEGGYGPVAEVLF
                     GKCRVDGFFLEYDTERAGTFEPLRHIKDQQVVLGLITSKFGDLEDKNVIIERIKEAAQ
                     IVPINQLCLSPQCGFASTEEGNILTEAAQWAKLNLIKEIAEEVWGS"
     gene            complement(9837..11228)
                     /locus_tag="PXD69_000129"
     CDS             complement(9837..11228)
                     /locus_tag="PXD69_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDL6282375.1"
                     /translation="MENTPLIEPSKNTRNSLIFVADAILFIILLNTLPFTPEANKGLA
                     LLIFIAVLWLTEALHVTVTALLIPILAVALGLVKSKEALVAFADPTIFLFFGGFALAT
                     ALHIQQLDRMIANKIMALAKGKLSIAVIYLFAVTAFLSMWMSNTATAAMMLPLAMGIL
                     SKLDQKQNHNTYLFVLLGIAYSASIGGMGTLVGSPPNAIVASQLNLTFADWLKYGLPI
                     MLILFPLMIATLYIVFKPNFSVSFDRSFEKIELNRSRIITLAIFVFIALGWIFGDKIN
                     PIISAFLGINGKIASFDTILALIAAALICITRVANWQQIQENTEWGVLFLFGGGLTLS
                     AVLGQTGASKIMADGVVSLIEGGHFYLIGLIVAAFIIFLTEVTSNTASAALLVPIFIS
                     IAQALNMPPVGLALIIGLGASCAFMLPVATPPNAIVFGTGQIKQSEMIKVGFWLNIIS
                     IFVIATVGYLFWL"
     gene            complement(11388..12287)
                     /gene="cdd"
                     /locus_tag="PXD69_000130"
     CDS             complement(11388..12287)
                     /gene="cdd"
                     /locus_tag="PXD69_000130"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDL6282376.1"
                     /translation="MFRTDITERFEQLKAAKNCEVTQAIIEQLIKQDFHGQLSYEVVD
                     ELCEKFKRSRVELALYCIAIAACYAVTPVSDFNVGAVAIGKNGDFYFGANQEFSGECM
                     QQSVHAEQSAISHAFLAGETLITDVVVNYTPCGHCRQFMNELNSAASLKVHLPHSQNN
                     LLHSYLPDSFGPKDLGIEKVLFDEQPQQFEVKGDHLQQAAIFAANNAYAPYSNAFSGV
                     ALQVGERIVCGKYTENAAFNPTFLPLQSALNYRLFLGLADIPVTRVVLAEAKGSLSSY
                     AMTQALAKSLFGLEIEYLSLQAV"
     gene            complement(12301..13203)
                     /locus_tag="PXD69_000131"
     CDS             complement(12301..13203)
                     /locus_tag="PXD69_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6282377.1"
                     /translation="MISSSLKLGYFSLIVATLFWGGNFVLGKVLSGAVQPITLTYLRW
                     LPAFLILVLLFFRPTWRVMHLLKPRLGVMWVLGLLGVILFPATLYEGLKTTTALNASL
                     YLAISPVLVLFLNRLVFKEKISPIILSGAIISLLGVLWLLMQGKLTRLFSLAINQGDL
                     WAIASTISWAVYCCVIRLRPQGISNTVFLTVLVGLAVLTLTPFFIYEYVAESAKNLAN
                     LTALQWSGIGYLVIGPSILSYAFWNFGIAIVGSAKGAVMTNFTPLFAAMFSIILLNES
                     VHTYHIISAILITAGILICSYKKH"
     gene            complement(13200..13556)
                     /gene="folB"
                     /locus_tag="PXD69_000132"
     CDS             complement(13200..13556)
                     /gene="folB"
                     /locus_tag="PXD69_000132"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDL6282378.1"
                     /translation="MSDKVFIRELTAFASIGAYNWEHTIKQRLVFNIDMAWDFSKAAE
                     TDDVQYCLNYAEVSQKVLDFVESQPFKLVETVAYQLAELLQKEYQLSWIRIELHKPKA
                     VAQASSVGVIVERGHQ"
     gene            13626..14231
                     /gene="plsY"
                     /locus_tag="PXD69_000133"
     CDS             13626..14231
                     /gene="plsY"
                     /locus_tag="PXD69_000133"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDL6282379.1"
                     /translation="MNLIPYLLILTAYLLGSISSAVIFCKLAGLPDPREVGSHNAGAT
                     NVLRIGGKSAALGVLLFDILKGTLPVAMGIYFELSPSQLGFIALAVCLGHIFPIFFQF
                     RGGKGVATAFGAISALSFIVAGGAIGTWLLVFLISGYSSLSAVFTALVVPFYIWWFEP
                     QFTFPVALVCCLLVYRHHDNIQRLWRGQEDKLWDKFKKNRA"
     gene            complement(14305..16212)
                     /gene="parE"
                     /locus_tag="PXD69_000134"
     CDS             complement(14305..16212)
                     /gene="parE"
                     /locus_tag="PXD69_000134"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDL6282380.1"
                     /translation="MSEKRYGADEITVLKDLEPVQLRPGMYTDTTRPNHLGQEVIDNS
                     VDEALSGFADKIDVILHADNSLEVVDNGRGMPVDIHSTEKISGVELILTKLHAGGKFS
                     NKNYTFSGGLHGVGISVVNALSERVEIQIKRGGEVYSIAFANGVKVEDLTVIGTCPKK
                     QTGTTVRFYPNPKYFDSPRFSVSRLRHLLRAKAVLCPKLTINFIDKINNTEESWYYED
                     GLSDYLSEALNGYETVPNPPFIGDVTAETEAVSWALTWLPEGGELVAESYVNLIPTAQ
                     GGTHVNGLRNGLLKAMVEFCEIHNLLPKGVKLTADDVWNRCAYVLSLKIQEPQFAGQT
                     KERLSSRQASSYVDSTLKDAFSLWLNQNVQTGKLIAEMAISSAQSRMRAAKKVVRKKL
                     VSGPALPGKLADCTAQDLSRTELFLVEGDSAGGSAKQARDKEYQAILPLRGKILNTWE
                     VSSDQVLASQEVHDIAVALGIDPDSDNLEELRYGKVCILADADSDGLHIATLLCALFL
                     RHFPKLVQNGHVYVAMPPLYRIDIGKDEVHYALDEAEKEAILARLAKKKGKPNVQRFK
                     GLGEMNPSQLRETTMEPSTRRLVQLTFDDTVEEGELNTFEIMDMLLGKKRAEDRKQWL
                     QNRGDEADLAV"
     gene            16420..16644
                     /locus_tag="PXD69_000135"
     CDS             16420..16644
                     /locus_tag="PXD69_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL6282381.1"
                     /translation="MVVKILKRKSQKTLQQIYTQPISANIKWTNIEALFLELGAEIEE
                     REGSRIAVVLFQQVRVFHRPHPNPDTDKGR"
     gene            16687..17016
                     /locus_tag="PXD69_000136"
     CDS             16687..17016
                     /locus_tag="PXD69_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL6282382.1"
                     /translation="MRNIMDINGYKAVIAYDPETELFRGEFIGLNGGADFYADNVIQL
                     KKEGELSLNIFLELCREKGIEPFKQYSGKFNVRLSPELHKAAVIAATAENLSLNEWIN
                     QTLEKSV"
     gene            complement(17055..17441)
                     /gene="cueR"
                     /locus_tag="PXD69_000137"
     CDS             complement(17055..17441)
                     /gene="cueR"
                     /locus_tag="PXD69_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HDL6282383.1"
                     /translation="MNISQAAEKTGLSAKQIRDYEKAGLLPPTSRTEAGYRFYNATDL
                     SRLHFISNARKVGFSLAQISELLKLNDNPNRSSRDVKQLTEQHIGELEQKIADLNQML
                     TLLKSWSSSCCGNANSECSILNGLNG"
     gene            17530..17730
                     /locus_tag="PXD69_000138"
     CDS             17530..17730
                     /locus_tag="PXD69_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL6282384.1"
                     /translation="MTITLQLDGLHCGNCVKSVEKALNGVAGVNQVSVTLEPQIAVVE
                     GSAEAQALIEAVEDIGFDAKLA"
     gene            17783..19975
                     /locus_tag="PXD69_000139"
     CDS             17783..19975
                     /locus_tag="PXD69_000139"
                     /EC_number="3.6.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDL6282385.1"
                     /translation="MTSTAHYSPEQQLLIDGMHCAACVRRVEKALLKVEKVEFASVNL
                     ADQTAFVQGNANPEALVAAVVKIGFGAEVLESEEERRIKQQAQTQRVLGHKRTQFMLA
                     LVVGFALVAFGFYKGMTVNETNRSLWLSWAGISLATMYFSGKDFFLGAFSALKNRSAN
                     MDMLVAISTGTAWLYSCWLTLFPQPNAHVYFEASVMILGFINLGKYLELKAKQRSSLA
                     LEKLLDLAPKQAVIFEENIAKTIPAKAIKPQMRVQALTGDRLAVDGILDSGSIWVDES
                     MLTGEALPVEKKIGDKVRAGTLVQDGSGTYIAEQVGSQTALARVINAVRHAQSSKPPL
                     AQFVDKIAAVFVPVVVSIALLSALIWLAVGQDFAFALSIFTTVLIIACPCALGLAIPL
                     STIAGVARSAEFGVLVRNIEALQASSEIDTLVFDKTGTLTTGRMEVSDVLTFNGFEQK
                     RLLQLAKSVEQHASHPIAKAIAKFAENQTACGVTDVQVLKGLGISAKYEGSTIRMGNW
                     QFVGETIQANLASLLPAKEGDFSSKIFVSVDNQLAGVLSVSDQLRPEAKATIHQFQAE
                     GYQCVMLTGDRQQTADYFANALGLDGVIAEVLPEQKAEKIRALQAEGKKVAMIGDGIN
                     DAPALAQANVGIAMHNGSDIAVETADLSLMREGLAPLMQILPFSKKVLKNMKQSLLGA
                     FIYNVIAIPIAAGVLYPFTGWLLNPMIAAIAMTLSSITVVLNSQRLLK"
     gene            complement(20028..20813)
                     /gene="truA"
                     /locus_tag="PXD69_000140"
     CDS             complement(20028..20813)
                     /gene="truA"
                     /locus_tag="PXD69_000140"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDL6282386.1"
                     /translation="MKIALGIEYDGSRYFGWQRQEAVESVQQQLEQALSVVANSPVEV
                     FCAGRTDAGVHGTGQVVHFETQANRPLQSWCFGTNAHLPDDIAVKWAVAVNEDFHARF
                     SATARRYRYIIFNQKLRSAILPKGVTHFHFPLDERKMHQAGQYLLGENDFSSFRAAKC
                     QSNTPWRNIHHLNVSRQGNYVIVDIQANAFVHHMVRNIVGTLLEIGQGRQPVEWAKWV
                     LEQRDREKAAPTAKAEGLYLVEVHYPEHFGIPKTPLGPLFLAD"
     gene            complement(20878..21567)
                     /gene="folE"
                     /locus_tag="PXD69_000141"
     CDS             complement(20878..21567)
                     /gene="folE"
                     /locus_tag="PXD69_000141"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDL6282387.1"
                     /translation="MTTISPELTITENTLSPEAQKVRQALLAKGIETPTVTHTKDKAS
                     RRAEIQQHMQAVLELLGLDLSDDSLEETPHRLAKMYVDEIFSGLDYATFPKITNIENR
                     MKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQV
                     QERFTEQILTAFQTILETDDVAVYVKATHFCVKCRGIKDTNSYTVTSAFGGVFLEDRE
                     TRKEFLGLLNK"
     gene            21668..22375
                     /locus_tag="PXD69_000142"
     CDS             21668..22375
                     /locus_tag="PXD69_000142"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HDL6282388.1"
                     /translation="MQNIQYLFNADLIPEHQAEFVQSLLTCKNFDNSDRLLGFSKGRG
                     TTWFLDTSAELGINVVLRHYYRGGLFGKIIKDSYFFTRFEATRAYKEFFLLQQMLAWG
                     LPVPRPVAIKIERHFCCYRADIMLEKLENTQDLSKILQSHSLSNEQYEQIGKLIRSLH
                     NHQIHHSDLNIHNILLGNDGKFCLIDFDKCGIEPGENWKQNNLDRLLRSFKKEQGRLN
                     IFFSEENWQAVLRGYTL"
     gene            complement(22430..23527)
                     /gene="apbC"
                     /locus_tag="PXD69_000143"
     CDS             complement(22430..23527)
                     /gene="apbC"
                     /locus_tag="PXD69_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HDL6282389.1"
                     /translation="MNQLNEQQLVEIKAILQQFSHPTLQKDLIALNAFKKAELGGDIL
                     RIEITMPFAWNSGFETLKAETEAKLKQVTGSSGVKWVLNYQIATLKRANKHPAVNGVK
                     NIIAVTSGKGGVGKSTTSVNLALALRAQGTRVGILDADIYGPSIPHMLGAKDQRPTSP
                     DNKHITPITAHGLQSNSIGYLMEEDNATIWRGPMASSALSQLLNETWWNELDYLVIDM
                     PPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGISMFEKVSVPVLGVIENMSMH
                     ICSNCGHHEAIFGTGGAEKIAQKYGTKVLAQLPLHIRLREDLDSGVPTVVAAPEHEIS
                     QAYLALAEKVASELYWQGSVIPSEIMIREVK"
     gene            complement(23524..25071)
                     /locus_tag="PXD69_000144"
     CDS             complement(23524..25071)
                     /locus_tag="PXD69_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6282390.1"
                     /translation="MLKSLQAVTFVKKIAKVTACILLITSCDQLICPQSIQSVWVENR
                     QSDTLLKRAIYSAVFQLDPHKIKASADAAPLRDLLVGLTAYNRKGDVVPAIAQNWFTE
                     DEKEWLFILDEKAVWSNGQPVTAQDFVASWRRLIDPQNHSVLSKYLIYMGIENAKAIE
                     EQIKSVEELGVEALNAHTLRIRLNHPNHQLPEMLAHSALLPTYQGIAPTIDNFVSNAS
                     YRLEKLDAQKMVLKARTQEIPFQTIEYDLITTIQNCSAFDIVENPLLNKKTNIVKFPR
                     LCSYYYEFNFDDPLLAKREIREAIRTMVASANSGQEYGVPSQSVIPHSLVKDREKRWN
                     PVVVEQLLTKAGISPYNPLKLTLLYDENSINIANQVTRALSQSELFNITPKMVDWQTL
                     NKVREQKDYQIARAGWCADYPDPIVFLQKFHSMSPDNHSGYKSEIVDQKLNRLQTETL
                     SAEARESLIQEISEQLYSDVAVLPLFQYHHRVGIVSSLLGIDLNNDSEVIYSKDLKRN
                     LANKDNQ"
     gene            complement(25097..25747)
                     /locus_tag="PXD69_000145"
     CDS             complement(25097..25747)
                     /locus_tag="PXD69_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchE family NAAT transporter"
                     /protein_id="HDL6282391.1"
                     /translation="MDIIINFAIYLQFFIGLFAIVNPFGSLPIFFSMTAHQYEGERNR
                     TSLITAVSIGVILLVSLYFGNLILNAFSISLSSFRVAGGILIVSIAMTMISGKLGEHK
                     QNKEEKNEDITEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHTWEDYVGFSIAIIVF
                     ALICYILFRYSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGITTLFPVLLVK"
     gene            complement(25869..27740)
                     /locus_tag="PXD69_000146"
     CDS             complement(25869..27740)
                     /locus_tag="PXD69_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HDL6282392.1"
                     /translation="MIEKMHERTNGPVFKIIFALVSISFVIGGIGTGLISQDNSVAKV
                     NGEEISQQLFNNTLNREQNRLNAELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQ
                     YAKELKLGISADQIKSEIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAAIVQEGML
                     QSQLQEGIINSDFNVPAQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRAYYE
                     ANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHIQ
                     VASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANNGGDLGWAKAGTFPKAFEDAVAN
                     LTAGQMSAAVKVDNAYHIIKVLERKPEQVIELAQVKDKIAQTIRQELVLTEYFTVARE
                     MANKAFENNSSLEEVAKAGNVELQKTDLFTRENVPTALQNEKVLKVLFEGELRQNKQN
                     SDALDVGNDANPQTLFVRVSDYDAERPQTFDEAKAAVENFVKAEKAEKALLAKVEENV
                     KALNEGKSVDVKFNAPQTLVYMQAEVENPVLAGTIFAMKKAQDKTTYQMARNQKGDVV
                     IVALDNITEGNAEQFKTLAPQFEQANRLILRNEFLQSLRAKASIEVNEDFMQQRSSH"
     gene            27922..28191
                     /gene="rpsO"
                     /locus_tag="PXD69_000147"
     CDS             27922..28191
                     /gene="rpsO"
                     /locus_tag="PXD69_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDL6282393.1"
                     /translation="MSLSVEAKAKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFA
                     EHKKDHHGRRGLLRMVSRRRKLLDYLKRTDLAKYSETIARLGLRR"
     gene            28263..29132
                     /locus_tag="PXD69_000148"
     CDS             28263..29132
                     /locus_tag="PXD69_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HDL6282394.1"
                     /translation="MAFASLFTLLDDIAAVLDDVSIMTKVAAKKTAGVIGDDLALNAN
                     QVSGKNVVPERELPIVWAVAKGSLINKVILIPLALLLSVFLPQAIIPLLMIGGAYLCF
                     EGVEKLLHRLLHKNNQAHSDETETLSEKDKIKGAIRTDFILSAEIIIIALGVLQDSST
                     LTQILSLSAIGVGITLFVYGLVGLIVKLDDIGLWLMQKKSTFSQAVGKGLLFAMPWFM
                     KGLSVIGTIAMFLVGGGIFTHNLPMIHHFVEQFGISPHFSTLVDFAVGIVVGIIACLI
                     ILPLMKLFSKKAH"
     gene            complement(29222..30487)
                     /locus_tag="PXD69_000149"
     CDS             complement(29222..30487)
                     /locus_tag="PXD69_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HDL6282395.1"
                     /translation="MFRTLFLMLLLLVGLISGPYLAGNQGYVRIETATTVIEMSIVML
                     VVFFVLAMAVVYLLEWIVTKICRMSNGAYNWFSTRKHKKAQQETLEGLMRMSEGNYSK
                     AEKLFSKNAKHADEPVLNLIKAAEAAQQNGDDLAANKYLIKATEIAGPNNVAVELVRT
                     RILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQIYKESRAYVALDRLLVEIGQRNF
                     LTAEEYAELEYFVDDGLQDERLQEEGQEGLLSWWENQPNRRRKSVYSRVGVIKRLIDS
                     DDHQSAQEIALETLKKFEDEQLQGLFVQLTRLQIDSDSKLLKVLAKRADKANVKYTDD
                     YARALGYIYTRDGQYQKAKSQFELLLAHDECVADDRIMALHVAEQMGDTLMANRIREE
                     NLKQVNMATQSKVNEPLALPQTATESNSL"
     gene            complement(30506..31816)
                     /locus_tag="PXD69_000150"
     CDS             complement(30506..31816)
                     /locus_tag="PXD69_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDL6282396.1"
                     /translation="MSRSKKVTEHLEHSAEKVVEEAQQAVDSAGSFAKKEIEEDVVNE
                     AIEKDIQTEMQKAPKEQVVVQKSGGKGLALVALLVALAVGGAGHYMANKKFAEVESQI
                     QAVSAKANQPTTQTMVEMPNFENEKAQIAELVTEYQKALERIKALETAQNGYTQQISS
                     LQLQLQKLNNTSGSDNTFWLLSEADFLLNNAARKVVLDNDIETAKNLLLEADQVLSKA
                     PNTIHIREAIKTDLNTLTALHQIDQNALMQRVANLANKLDDLPILESEQASNSKQDGQ
                     VSDSLADWEKNLEKSAASFLDHFIRVSKRNAADEKAFVAPNQEIYLRENIRLRLQIAI
                     LAVPRQQSELYKKSLQTVGSWVRSYFETSNENVQHFLKELDELAEQTIYVDAPTSLQS
                     LKVIAQQLNKTPEKIEKVEIKAEKELEQAEPVKAEQDAMPLSAQ"
     gene            complement(31828..32592)
                     /locus_tag="PXD69_000151"
     CDS             complement(31828..32592)
                     /locus_tag="PXD69_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDL6282397.1"
                     /translation="MNVLVTRLDSRGQELVDMLNEQQIFAIHQPLFTIEAGKELPLLP
                     SAISRLKSDDYVFVVSPNAVDYAAKTLVDTGFHFRSDLKYFAVGQRTAKYLTEKAEQA
                     VIYPIEFENSEGVLALPEMQNLTDKTILILRADSGRELLAETAVLRGATIQYLECYRR
                     EPVTDDIPEKISLCKRLGVDTIVITSSEILRSLYEQAKADCRAWLFECDLVVVSRRIA
                     KIAKQMGWQEDKIRVSDKADNVTLMNTLLFKVGKSN"
     gene            complement(32592..33527)
                     /gene="hemC"
                     /locus_tag="PXD69_000152"
     CDS             complement(32592..33527)
                     /gene="hemC"
                     /locus_tag="PXD69_000152"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDL6282398.1"
                     /translation="MKDILRIATRQSPLALWQANFVKSELEKHFPQLSVELVTMVTKG
                     DIILDTPLAKIGGKGLFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICERED
                     PRDAFVSNNYHSLEDLPKGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDN
                     GEYDAIILASAGLIRLGLQERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKL
                     NHSSTACCVMAERAMNTRLQGGCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAK
                     GHKQEAEQLGILVAEQLLAQGADKILAAVYNENVQ"
     gene            33823..36432
                     /gene="adhE"
                     /locus_tag="PXD69_000153"
                     /gene_synonym="adhC"
     CDS             33823..36432
                     /gene="adhE"
                     /locus_tag="PXD69_000153"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDL6282399.1"
                     /translation="MAKNTQPFDAQAEVNELVEKGLKALDEFRKLNQEQVDFIVAKAS
                     VAALDKHGILAMHAYEETGRGVFEDKATKNLFACEYVVNNMRHLKTAGVISEDDVTGI
                     TEIADPVGVVCGITPTTNPTSTTIFKALIALKTRNPIVFAFHPSAQQSSAHAAQIVRD
                     AAVAAGAPENCIQWITQPSMEGTSALMKHPGIATILATGGNAMVEAAYSCGKPALGVG
                     AGNVPAYVEKTAKLKQAVYDIVMSKSFDNGMICASEQAAIVDKEIYAEFIKEMQSYGV
                     YLVNKKEKALLEKYIFGIDKAKDENCSGAKLNSAVVGKPAAWIAEQAGFKVPEKTNIL
                     LAECAFVGEAEPLTREKLSPVLALLKSDSTEHGLELSEAMVNFHGLGHSAAIHTENKA
                     LAKTFGERVKAIRVIWNSPSTFGGIGDVYNSFLPSLTLGCGSYGKNSVGNNVSAVNLI
                     NIKRVGRRRNNMQWFKVPSKIYFERDSIQYLKSMHDVHKVMIVTDRSMVDLGFVDRIT
                     EQLRQRRNQVMIQFFTDVEPNPSLQTVQRGTELMRSFQPDTIIALGGGSPMDAAKIMW
                     LFYEQPEVDFRDLVQKFMDIRKRAFKFPQLGRKAKFVGIPTTSGTGSEVTPFAVITDG
                     DIKYPLADYSLTPTIAIVDPALVMSVPSHVAADTGLDVLTHATEAYTSILANDYTDGL
                     ALQAIKLVFENLEKSVKEFDETAREKMHNASTMAGMAFANAFLGICHSMAHKIGGKFH
                     TIHGRTNAILLPHVIRYNGTRPTKVATWPKYTNYVADVRFQDIARMLGLPAETPEQAV
                     EAYAQAVHDLAVRCGVKMSLREQGVDEQAFLNARRELALHAFEDQCTPANPRLAMIED
                     MEAIMTKAYYGKE"
     gene            36579..37475
                     /locus_tag="PXD69_000154"
     CDS             36579..37475
                     /locus_tag="PXD69_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HDL6282400.1"
                     /translation="MQITILDGGISRELMRRNAPFHQPEWSAAALYEGPHFVQAVHED
                     FIAHGAEVITTDSYAVVPFHIGEKRFAADGKMLADLAGRLAKQAVKNSGNIATQIAGS
                     LPPMFGSYRADLIQMERFAEVAQPLIDGLSPYVDIWLCETQSAIIEPISIKALLPKDN
                     RPLWVSFTLTDDEPTTEPQLRSGESVKQAVEEMVKLGVQAILFNCCQPEVIGEALSVT
                     QKTLAELKATHIRTGAYANAFAPQPKDATANDGLDEVRQDLTLEAYLGWAKKWTEQGA
                     TIIGGCCGIGVEYIETLAKNLK"
     gene            37485..38894
                     /locus_tag="PXD69_000155"
     CDS             37485..38894
                     /locus_tag="PXD69_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDL6282401.1"
                     /translation="MSNKKIGLISLTALVLSSMIGSGIFSLPQNMAAVAGAEAITIGW
                     LITGVGIIFLGLSFFFISRLRPDLDGGIYTYAREGFGELMGFMSAWGYWLCATIGIVG
                     YLTVAFEGLGVFTDNPNTVIFGQGNTLASFIGSSIIVWLVHALIAGGIKEAAFVNLIA
                     TFVKVAPLILFIGLGIWYFDVDLFNSDVKATALNNSVSDQVKSTMLITLWVFTGVEGA
                     SVLSAHAKKRSDVGLATVLGIIIALALYVAITILSLGILPRETIANMANPSMGPLLDA
                     MMGPTGKVIITACLIVSVLASYISWTMYSAEVPYRGSKNGAFPKILDKVNKNGTPINS
                     LWFTGFIVQFCLVLVFVFEQSYNTLLLISTSMILIPYFLIGAYLFKLAIQTNATWYIK
                     LTGFMAALYGLWIVYAAGLEYLLLSVVLYVPGILLFLYSNYKFNGRLTLSTAEKVILI
                     VLLVIFGYAVIELPALLAA"
     gene            39001..40224
                     /locus_tag="PXD69_000156"
     CDS             39001..40224
                     /locus_tag="PXD69_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF711 family protein"
                     /protein_id="HDL6282402.1"
                     /translation="MQTYQHKALCRVRTITLFLSLTKDKLQWETALNAAKAEFDLLVP
                     AIQTQGYHIQSIRIVTNSFGEYLDLTNIETAKQDLAYLKQLLTQLNDSGLRIRFAIGE
                     AKTPHELALLPELILNYGDLSNACVNIEPDEFGILDNETILQSAQIIKQIAEITPRGE
                     GNFNFTVNFNCKPFIPYFPASYHSSKLPNSFVIGLETPDLLVAVLKELKASPHNDFYR
                     QCYETMSQALQYHVDEVLEAVKSVQHKLQFAFAGIDSSAAPSKNCASMTEVYELMGVP
                     FFGAAGTVEASSLLTKVFKSIKHVPLVGFSGLMLAVTEDLGLAAGTHKAQFDIRALLT
                     YSAVCGIGLDTVPISNEATVEQIAALMRDTGTMAFRLNKPLTVRLFPIPNKSAGEVTE
                     FESDDLCNCRILAVP"
     gene            complement(40262..41458)
                     /locus_tag="PXD69_000157"
     CDS             complement(40262..41458)
                     /locus_tag="PXD69_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDL6282403.1"
                     /translation="MKQVIRFIVFSTLSLFSFSTFAKTIVAIDAGHGGKDPGAIGKNL
                     GILEKSVTLAISKELKALLDADPNFKAVMTRSGDYFIQLPQRTEIARKHRADLLVSIH
                     ADSSPRGDSLKGASVWVLSNSRASDEMGKWLEDHEKQSELLGGAGSVLSSNNERYLNQ
                     TVLDLQFSHSQRAGYELGKSILAKMSNVAALAKSSPQHASLSVLRSPDIPSVLVETGF
                     LSNSTEEAKLASANYRKQVARAIYNGLVAYRAKNAVASSSVSKKSDKEDKQNKKEEKT
                     AKADLTKKPASEKQEKNTQSDKTKLKEKSKKEDKKEDSAKTNKKKEQQLKEKTALEKD
                     QKNQSKKSDSQREIKVSNSGYHIVQQDETVYSIARAYGTTPQKISELNNLKNYQITVG
                     KKLKVK"
     gene            complement(41478..41969)
                     /gene="tsaE"
                     /locus_tag="PXD69_000158"
     CDS             complement(41478..41969)
                     /gene="tsaE"
                     /locus_tag="PXD69_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDL6282404.1"
                     /translation="MTDSLSFYCEDETKLLEFGQSFALELKKYLLQDQAHSLVVYLNG
                     ELGAGKTTLTRSIVRAFGHQGNVKSPTYTLVEEYQLPPFSLYHFDLYRLADPEELEFM
                     GIRDYFKPQTLCLLEWAVKGKGMIPEADFVIQIDYKNDGRQISLLPQNQTAVDILVNF
                     HQK"
     gene            complement(41969..42523)
                     /gene="orn"
                     /locus_tag="PXD69_000159"
     CDS             complement(41969..42523)
                     /gene="orn"
                     /locus_tag="PXD69_000159"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDL6282405.1"
                     /translation="MAQNEQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGP
                     VLAVHQTDDLLEKMSDWCVKTHTANGLIERVKASKLTERAAELQTLDFLKRWVPKGAS
                     PICGNSIAQDKRFLYKYMPDLADYFHYRHLDVSTLKELARRWKPEILDKFSKGNTHLA
                     LDDIRESINELKFYREHFIQLDQK"
     gene            complement(42533..43012)
                     /gene="coaD"
                     /locus_tag="PXD69_000160"
     CDS             complement(42533..43012)
                     /gene="coaD"
                     /locus_tag="PXD69_000160"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDL6282406.1"
                     /translation="MSYNVIYAGTFDPITNGHLDIICKASHLFGKVIVAVAQNPSKQP
                     LFSLEERVELVKQSCTQWQNIEVIGFSGLLADFAKQQNAKALIRGIRGADDIDYEIQL
                     AQLNYKLSGDLETIFFPPSIEWRYLSSTMVREIYRHNGDISQFVPQAVKNALKIAKV"
     gene            complement(43014..44294)
                     /gene="waaA"
                     /locus_tag="PXD69_000161"
     CDS             complement(43014..44294)
                     /gene="waaA"
                     /locus_tag="PXD69_000161"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDL6282407.1"
                     /translation="MLRLLYICLSYLLQPVVLLLMWYKGRKQPAYRKRLWERYGIYDE
                     SEKPKAKGVVIHAASVGEVIAATLLIKAVSKQYPELPLIVTTVTPTGSGRVQAAFGNS
                     VSHFYLPYDLPDAIERFLNFIDPKLMIVIETELWPNLIRKVNIRKIPFVIANARLSPR
                     SAKRYGWVKGSIKDMLNQISLIMAQDEVSRDRYLALGYAPAKMVNTGNLKFDLEITPQ
                     LHQSVIKTKASLNLTERPIWIAGSTHEGEEKLILDAHKLLLEHYPNLVLILVPRHPER
                     FGLVELLIQKSDLNYVKRTENKTLSQNTQVMLGDTMGEMMLLYGLSDIAFVGGSLVKH
                     GGHNPLEPIAFNIPVVSGLYTYNFPEIFEKLREVKGVIEIESSVEALTESIQLLLKQP
                     QIGQEIAKSGLSVLQENQGALKRHLDLLASYLEK"
     gene            complement(44474..45853)
                     /gene="yegQ"
                     /locus_tag="PXD69_000162"
     CDS             complement(44474..45853)
                     /gene="yegQ"
                     /locus_tag="PXD69_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HDL6282408.1"
                     /translation="MTLKYAKPELLSPAGSLKNMRYAFAYGADAIYAGQPRYSLRVRN
                     NEFNHANLKVAIDEAHALGKKFYVVVNIAPHNSKLKTFIKDLKVVVDMKPDALIMSDP
                     GLIMLVRENFPEMDIHLSVQANAVNWATVKFWRQMGLTRVILSRELSLEEIEEIREQV
                     PDMELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGKIDEVGQI
                     VPKYEPEIEVKNVAPTLGNGEATDKVFLYTESQRPDEQMTAFEDEHGTYFMNSKDLRA
                     VQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDESLMDTLESL
                     AHRGYTEGFLRRHTHDEYQNYEYGYSISERQQFVGEFTGKRNAEGLAEVAVKNKFLVG
                     DSVEMMTPKGNIVFKIERMLNRKNENVDAALGDGHFVFLDVPADIELDFALLMRNLVN
                     TNTRNPHQA"
     gene            45981..46352
                     /locus_tag="PXD69_000163"
     CDS             45981..46352
                     /locus_tag="PXD69_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282409.1"
                     /translation="MKLKYLLATTLLAFSTFTAAQSIKTEMMQMNMQANKLMRAESAE
                     EFSEIANDFIIITEKTKGIFPNSVEGDKAAQEDYQAGMQKLIDMVNQASEKAQAGELQ
                     EAKMLISELEMIKREYHKKYK"
     gene            complement(46391..49867)
                     /gene="dnaE"
                     /locus_tag="PXD69_000164"
     CDS             complement(46391..49867)
                     /gene="dnaE"
                     /locus_tag="PXD69_000164"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDL6282410.1"
                     /translation="MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAAANNMVAMGLTDF
                     INFCGLVKFYGEALGAGIKPIIGADVYVRTESGNEDYFELTLLAKNNKGYHNITQILS
                     KAYQQGYVEFPMVEREWLAELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQY
                     YPNHFYLSVCRTGRADEERYIKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAI
                     HDSYTLDDPKRPKKYSPKQYFRTEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYF
                     LPNFPTGELSTEDFLVKKSKEGLEERLEFLFPDPEERANKRSVYDERLQVELDVINQM
                     GFPGYFLIVMEFIQWSKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLN
                     PERVSMPDFDVDFCMDGRDRVIEHVAETYGRQAVSQIITFGTMAAKAVIRDVGRVLGH
                     PYSFVDRISKLIPPDPGMTLEKAFAAEPKLPELYEADEEVKDLIDMARKLEGVTRNAG
                     KHAGGVVIAPTAITDFSPLYCDSEGLHPVTHFDKNDVEYAGLVKFDFLGLRTLTIIKW
                     ALEMINERLAREGKEPIRIETIPLDDKKSFALLLAAKTTAVFQLESRGMKDLISRLKP
                     DCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEVSYPDPQYQHECLKPILEPTYGV
                     IVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMAAQREVFEKGAEAKGIDGKLA
                     GQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTSEMDNTDKIVG
                     FYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGVGEGPIEAILAARQKEG
                     KFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKNLEDALKASDQHAKM
                     EELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYLSGHPIGRFLKEL
                     SHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDRSGKLDITLFS
                     EALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAKSLALAISK
                     EQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAMFSELKA
                     LLGENSVELEFE"
     gene            complement(50092..51189)
                     /gene="lptG"
                     /locus_tag="PXD69_000165"
     CDS             complement(50092..51189)
                     /gene="lptG"
                     /locus_tag="PXD69_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDL6282411.1"
                     /translation="MQFFSMNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDV
                     GRGSYDGLKAAYYTFLTIPRDIETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRF
                     RIGLAVMKTALPLVIFTMIIGEWGVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGN
                     SFIYINHIKNEKSLDNVLIYQFGEGQNKRELQSVLKARTANYSDEKGWVLSKVEKSTV
                     GENQIQQAKQPDQVWQTSLTPSKLGIVSLKPESLSISGLADYVGFLKDTGQDPKRFEI
                     TFWRKVFQPISMAVMMLLAISFIFGPLRSSTMGAKIVIGIVAGFMFYVANIVFGNLSL
                     IATWLPIPVGALIPSLLCLIIVWWLLSKKRD"
     gene            complement(51189..52298)
                     /gene="lptF"
                     /locus_tag="PXD69_000166"
     CDS             complement(51189..52298)
                     /gene="lptF"
                     /locus_tag="PXD69_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDL6282412.1"
                     /translation="MILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVSGKVP
                     ADLVVSLLGLGMPTMAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVA
                     MFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKANPRFAALSAGQFMSAGGYVLFID
                     KIENNSLNDIYVFQPEQQKKNKPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSA
                     DFRISHFENYSAYLGYQDVESDEKLVQRADFKKLMETKTPEAKAELHWRLALILAVPL
                     MALLAVPMSSVNPRQGRFAKLLPALLLYLIYFLLQSSLKSSGASGKLNAEVLMPLVSV
                     AFLVLGVILNAWDSKFMSKLRYQFGAKKLTNKAVA"
     gene            complement(52472..>53166)
                     /locus_tag="PXD69_000167"
     CDS             complement(52472..>53166)
                     /locus_tag="PXD69_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282413.1"
                     /translation="KLRLSYDGNVGNLLQQLSQRLKVGFIAYDVDITRKISLQNETET
                     AIKTINEQIESQLTNIDVRFEKIGERLFLVVSAKDVAPLLQNEPKEVQFVGDVIFDGE
                     PNLTEQAQSTAEATKVQNILNIATNQEKIMAAKGKKAPQYKTVTKDNIGLKNIRVTAL
                     GTFLVFDTSVDAAKLRVKGNFEDIAQGENIIAILHQNTEAPPKIEIEDSQGKKLILEA
                     HKATSSKKSKKQ"
BASE COUNT        15491 a        11751 c        10176 g        15748 t
ORIGIN      
        1 ctaaatatgt ggtcggtaca ggcgatgata ccgatggaga agtaacaaac tttgtaatca
       61 tcacaagtga gtacaaatac attgatgcac agtccgccaa ggagattact gatgcaccgc
      121 taacaaaaga ggatattggc aaaacgccaa cgcagattat gttagggcgt atctataagt
      181 acttaaaaga gacggggcag attgtagttt aatttagtaa cttttgaaga ctagctcatc
      241 accaacgtgt tccataaatg taccgtaaat ggtgttattt aatgtaaaaa gatgtgaaat
      301 aatggtaggt aatatagagg ggttatctct ataagtcttt gtttttatta gttaaaataa
      361 acgcctttta taaaatacct atcgcccttc taaggcgtgg gtcaaaggtt cgaatccttt
      421 agggcgtgcc attaaattct tttaaattca aatacttaca cagcctcaaa aactcacgct
      481 aaagaactat tttctgtatt gtgacaaaat tgtgccaaag taaagtttac tggttcaaac
      541 aaaaaagcca tctagctcta tctcactaaa tggctttatt ttatctttta ttaagctgca
      601 aaaggatcac gcaaaatcat cgtttcgaca cgatccggac ctgtagaaag aatatctacc
      661 ggcacaccga ccagctcttc gatacgttta atgtaatcta atgcggcttg tggtaaatct
      721 tcacgttttg tcacacggaa agtattttca gaccaacccg gcattgtttc ataaattggt
      781 tcaacacctt cccagtcttt tgctgcaaga ggggcatatt cgacaatttt tccgtttggc
      841 attttgtagg caacgcagat ttttagctct ttgaatccgt ctaaaacatc gagtttagtc
      901 atacagaagc ctgaaatgga gttgatttgc actgctcggc gaacggctac ggcatcaaac
      961 cagccacaac ggcgagggcg accggttacc gctccgaact cattaccttt gcgagcaatt
     1021 tcagcaccta catcgtcaaa tagttcggtg gtgaacggtc cactacctac acgggtacag
     1081 taggctttga taatccctaa tacataatct aaatgacgag gaccgtagcc tgatccggtt
     1141 gccacaccgc ctgctgtcgt attcgagctg gttacgaacg ggtaagtacc gtggtcgata
     1201 tctaacatcg tgccttgagc cccttcaaat aaaatattgt cgccgttttc acgtgcttcg
     1261 tgaagtaaag ttgtcacatc ggcaaccatt ccggtaatca catccgcaat cgcaaacaca
     1321 tcatctaagg ttttttgata atctaccgct tcaactttgt aataattgac taattggaag
     1381 ttgtagtaat ctaaaatatc ttttaatttt gcggcaaaat gttctttgtc gaataaatcg
     1441 ctgacacgta aaccacggcg agcgacttta tcttcataag ctgggccaat accacgtcct
     1501 gttgtaccaa ttttgttttt accaagtgcc gcttctcgag cgtgatccat cgcaacgtga
     1561 taaggcagaa ttaacgggca agcttcagaa atttttaaac gctcacgcac attaatgcct
     1621 cgttcttcta gctcccccat ctctttcatt aatgcctctg gagaaagcac tacaccatta
     1681 ccgattaaac aagtcacgtt atcacgcaaa atacccgatg gaattaaacg cagaacggtt
     1741 ttttcaccat taatgattaa ggtatgccct gcattatgtc caccttgata acgtactaca
     1801 tatttcacac gatctgttaa taaatcaaca attttgcctt ttccctcatc gccccactga
     1861 gcgccaagaa tagcaacact tttacccata gaaatgcctc ttttagttag gatgaataac
     1921 gaaacccatt ataacttcat atcgcaagcg gtcaattttt tcaaattttt tgcaaaaaat
     1981 cagccaaaat ttaccgcttg ttatgatcag aatagggatg aaaattaaaa acccgataca
     2041 agatcgggtt ttatagatac aattattttg tcggtgcttg cataaagcgt aagaattcgc
     2101 tgtttggctt taataacatc atattatttt gaccttcggc aaagctatct tcataggctt
     2161 ttaaactacg aataaaactg taaaattccg gctcgttacc aaatttctct gaatagagtt
     2221 ttgcagcttg agcgtcacct tcacctcgca aggcttgggc agttttgttc gcatttgcca
     2281 aaatcagcac cactttttta tccacttcgg cacgaattac ctctgctttc tcattacctt
     2341 gtgagcggtg ttcacgagca accgcatcac gctcggcacg catacgttgg taaattgaag
     2401 aagaaacttc atttggtaag ttgatttgct tcactcgcac atcaaccact tcaattccta
     2461 aacgctctgc tccatcttca ccggcattca gcgctttttg ggctcctgcc attaactcac
     2521 cacgagagcc ggatacaata tctttaatgg ttcgagaacc aatctcggaa cgcagacgat
     2581 cccctacctt acggcgtaat aaatccgccg ctttttggta atccccccca gtagaggtat
     2641 aaaattggcc aaaatcactg attcgccatt ttacatagga gtccactaat aaatcttttt
     2701 tctcgactgt tacaaaacgg tcttcttgcc catctagagt ttgaatacga gcatctaata
     2761 cctttaaact atcgataaat ggtactttaa agtgaatccc cggttcatat accaccactt
     2821 tttgatcgct atcacgatga actttgttaa aacgtaacat aatgccacgc tcgccctcgt
     2881 ttacaatggt gattgcctgt agcacaacaa aagcaactac agcaagtata ggtactaata
     2941 atctacgcat gattaaaatc tccccttacg agttggttct tgttgttctg cttgttgcgg
     3001 ctgaatttgt gttcttggct gtacttgcgg ctgaacaact tgtggtgtaa ctacttgtgc
     3061 cgccgcaggc tgctccgctt ttattaccga tgaagaattc attagcttat cgaaaggcaa
     3121 tacattcaaa ttattaccac ttgaatccat caccactttc ggcgtatttt tcatgacttt
     3181 ttccattgtc tggatatata aacgttcacg agtcagctct ggagaggctt tatattcagg
     3241 taataattga ctcaaacgct ccacttcccc tttcgcattt aacacaactg cttctttgta
     3301 agcttgagct tgctcaatcg tacgctgtgc ctggccacgt gcaatcggct cttcacctct
     3361 tgcataggct tccgcttcac gaattaagcg ttgctcatct tcttgtgctt tgattgcatc
     3421 atcaaaggcg gctttcacct cttcaggcgg tcgtgcatat tggaagttta cgtctgttac
     3481 caataaaccc atatcatagg ttttgataat atcacgcaat gtcgaccacg ttctttcacg
     3541 cacggttgca cgccctgtgg ttaaaatttc atccatcgtc atatgaccaa tcacataacg
     3601 caaggcactg tctgttgctt gttttaagct gtcatcaggg ttgctcacac taaacagata
     3661 tttagccggg tcttccacac gatactgaac cgtcatttct acctgcacca tattttcatc
     3721 ttgagtcagc attgagccac tggtgttcag ctctgaaaca cgttctacgt ttactcttgt
     3781 aaccgaatca ataaaagtcg gtttccaatt caaccctggc aacacgatat cattcagctt
     3841 acctaaacga gtaaccacac cacgttcagc ctcttgcaca gtgtaaaaac ctgagccaac
     3901 ccaaactact gctgcaagac ctaaaaccac aggtagaaat ttccctaagc ttgcactagg
     3961 ttgatttgaa ctattattag gcccttttcc accccccatt ttttttaata aactgctaaa
     4021 tacttcttct aaatcagggg gctgttgttc atttctttga ttattggtcg gctcttgttg
     4081 tgaaccctgt tcttgttgct caggctttgg ctcagctttt ttctgccccg gtttacccca
     4141 aggatcttgc tgattgcctg attcattcca cgacataaat atctccaaaa taaaatcgaa
     4201 tcgcacttta aagcttagaa tgcaagttag tgattgtacc tatttagtaa gcttttgact
     4261 aggtttatct gaaacaagcg gtcttttttc actatttatt tgcaaaaaaa tagggcgata
     4321 aattcgccct agtattgctc ttaaaattat aatgcttgtt tgataaattc agccatttgg
     4381 gcgtgcggaa ttgcaccaac ttgctgggca atcacttcac catttttgaa taatagtaaa
     4441 aatggaatgc tgcgtacgcc aaattgtgct ggtacagatg gattttcatc tacgttcatt
     4501 ttgacaattt ttactttacc atcaaattgt gcatcaacag ataaatcgtc aagtacgggg
     4561 ccgatcatac ggcaaggacc acaccaaggc gcccagaagt ctaataatac cggtacatct
     4621 gattttaaaa catcttgttc aaatgtagca tctgttgtat gaatgacatt gctcataagt
     4681 ttatccttaa atattaaata aaaaaagaaa cgccctaact ggcaagttaa ggcgaacagt
     4741 tttgtataag atagagatta atctataaaa tttcaagcaa gatttaccaa ttacaccaat
     4801 aaatatttgc atagtgagat tttattatct cttcaattat ttaattaaaa gtggaaaggg
     4861 ctatattcaa acaactttaa caaaaaagga ctaatcacta agattagccc aactcgttcc
     4921 caacaaataa ttagaacttc accccgaaac cggcaaataa gacaaccgga tcaagtttta
     4981 cttttacttc gtgatctgca cctgctgctt taaattttgc ggttgtttta atgcgtgtgt
     5041 accaagctgc cgcgttgaag tagatgttat cggttaattt tacatcaaca cctaggtttg
     5101 ctaccggtcc gaaagaatgt ttttttacac ttaagtcagt aacagcaggg ctaactgatt
     5161 tagcgtggta gaagcgagtg taatttaaac ctgcaccaac gtaaggtttt acttttgcag
     5221 ttagctcaaa gaaatagtat tgggcataaa ggctcggtgg taattgtttt aagataacaa
     5281 ctctatccaa atctacttct gcacctgatt ctaaaacttt ggctttggca ttaattttat
     5341 gagagaaagg ggttgcacct aataactcaa tacccacatt atcggctaac atataagttg
     5401 cagttaagcc taactgagta ttgtttttca cttctaaatc tacatcaata cctgtcgctg
     5461 cttttgattt tgcatctgaa cttgaatttg ccttaacatg taccgcaccg gcacggaata
     5521 tcacatcacc tgcttgatgt gccaccgcag ttccagttaa taatgcccca cctaaaataa
     5581 ttgctaaagt tgattttttc attttcatat cctcaaaaat aattagaata cctataatga
     5641 ggtaaacttt agcgaagtgt aaatgaaatg aaatagaaat gaattgatat ttatcaaact
     5701 tttaacacaa agatacccaa caagagttat tttatttatt tttgtgatct ttttcacatt
     5761 tttacttgaa aattgtttac caagctccat ttagtgtttc aacaagagat gtaaataaaa
     5821 atttacactt tctaaactca ttgtaaggag aaagaaatga attttgaaaa aatgaccaca
     5881 aaactgcaag aagccttggc tgaatcacag tcgcttgcgg taggaaaaga taatccgtac
     5941 atcgaaccgg cacatttgct ctatgcgttg ttaaaacaag aaggtggctc gattgcttct
     6001 ttgtttacca cattaaatgt tgatgtaccg actttaattc gtgaattaca acaaatttta
     6061 gaccgcttgc cgaaagttca aggcggtaac acccaagttt cacaacagtt ggtcagactg
     6121 ttaaatcaat cagacaaact ggcacaacaa ttcggcgaca gctttatttc atcagaacta
     6181 tttgttctag ctgcacttga tgacaatggc gatttgggga aactatttaa acaatttggc
     6241 ttaaacaagg aaaaactaac acaagccatc agccaaattc gaggaggaga cacagtgaat
     6301 aatcaaaatg cggaagatac ccgccaagca ctcaaaaaat atacgattga tttaaccgaa
     6361 agagccaaag ccggtaaatt agacccggtt atcgggcgtg atgaagaaat tcgccgtgcg
     6421 gtgcaagtct tacaacgccg taccaaaaac aaccctgtgt taattggtga accgggtgtg
     6481 gggaaaacgg cgattgtaga aggcttggca cagcgtattg taaacggcga agtgccggaa
     6541 ggcttgaaaa ataagcgtgt actttcgctg gatatgggag cattaattgc cggtgcgaaa
     6601 tatcgtggtg aatttgaaga gcgtttaaaa gcggttttaa acgacctggc gaaagaagaa
     6661 gggcaagtta tcctctttat tgatgaaatt cacacgatgg ttggagcagg caaaacagac
     6721 ggagcaatgg acgccggcaa cttattaaaa ccaagccttg cccgtggtga attgcactgt
     6781 gtgggggcta caacccttga tgaatatcgc caatacattg aaaaagacgc agcccttgaa
     6841 cgccgtttcc aaaaagtatt ggtggacgaa ccaacggttg aagatacgat tgcgatttta
     6901 cgtggtttga aagagcgtta tgaaatccat catcacgttc aaattacaga ccctgccatc
     6961 gtggcggcgg caacgctttc gcaccgttat gtgtctgacc gtcaattgcc ggataaagcg
     7021 attgacttga ttgatgaagc cgcttcaagc ctgcgtatgg agattgattc taaacctgag
     7081 ccgttggata aattagaacg ccgcattatc caactcaaat tggaacgcca agcgttacaa
     7141 aaagaggaag atgaagcgag ccgtcagcgt ttagccaaat tagacgaaga aatggcagcg
     7201 aaagagcgtg aatattccga gctggaagaa atctggaaag cggaaaaatc cgccttactt
     7261 ggtacacagc atattaaatc ggagttggaa aatgcccgaa ttgcgatgga tcaggctcgc
     7321 cgtgaaaacg atttcgagaa gatgtcggaa ttgcaatatg gcgtgattcc aaacttggaa
     7381 aaacagttac aagcggtcga aaatggcgaa aaaaatgcag atgctcagct cctccgtact
     7441 aaagtcaccg aagaggaaat tgcggaagtg ctttcaaaag caacgggcat tcctgttgca
     7501 aaaatgatgg aaggcgagaa ggaaaaactc cttcgtatgg aagaagtatt acacgctcgg
     7561 gttatcgggc aaaatgaagc cgttgatgcg gtggcaaatg cgattcgccg tagccgtgcc
     7621 ggactttccg atccgaataa accgattggt tcattcctat tcttaggacc gaccggcgtg
     7681 ggtaaaaccg agttaagcaa aaccttagct aatttcttgt ttgacgatcc tgatgctatg
     7741 gtgcgaattg atatgtctga atttatggaa aaacacagcg tatcccgctt agtgggcgca
     7801 cctccgggct atgtcggcta cgaagaaggc ggctatttga ccgaagcggt tcgccgccat
     7861 ccatattcgg tagtgttact tgatgaagtg gaaaaagctc accctgatgt gtttaacatt
     7921 ttattgcaag tgttagatga cgggcgttta accgacgggc aaggcagaac agtcgatttc
     7981 cgcaatacgg tagtgattat gacctcaaac ttaggctcgc atttaattcg agaaaatgcg
     8041 tataaaggct atgatgtggt taaagaaatg gtgatggaag tcgtcggaca gcacttccgc
     8101 cctgaattta tcaaccgtat tgatgaaacg gtgatgttcc actcacttgg tcaagagcat
     8161 atccgttcga ttgcgaagat tcagctacaa cgcttaatcc aacgcttggc agaacgaggc
     8221 tatgaggtga cagtaaccga tgcagcatta gatcatatcg gcaaggctgg tttcgatccg
     8281 ctgttcggag caagaccact gaaacgtgcg attcaacaag agcttgaaaa tccgcttgct
     8341 caacagatct taagcggtaa attattaccg aataaagccg ttacggtgga ttaccaaaac
     8401 gggcagattg ttgcaacaca ataatgtctc cgatggtgcg agcgtcctcg ctcgtacctt
     8461 acaagcggtg gatttatcgt aaaaatttgc aaaaaattgc tcgaaaataa ccgcttgcac
     8521 agtaaaaatt ttcatattgc ccttcattaa ttttcataag ctaatgaagg gctttttatt
     8581 actctttttg ctatcattaa cggcgtttat aaccaataca attacaagga gtaatttatg
     8641 agccaattat ttccggaagc aacaatccgc actcaagccc cgtatcgtaa tgatattgta
     8701 ggcagctttc tacgtaccga tgcgttaaaa aaagccagag aagatttcaa tcagcaaaaa
     8761 atcacccgtg acgaattgcg tgaagtcaca cgccaagagg tcaaaaaatt agttgagttg
     8821 caaaagcaac acggtgtaaa agcagtctct gacggtgaat ttagccggac ttggtggcat
     8881 ttagatttct tagctgaact tgatggaatg gattggcaag aaaccgaagt ctttaacgtg
     8941 aactttaccg gtcataaacc caaagggcaa acggtaaaaa tcgtgggcga tattgatttc
     9001 tccgaaagcc acccttttgt ggacgcttat cgtcttttaa aagaagctgc cggcgattac
     9061 ccaaccaaat tcacgattcc ggcaccgaca atgttacata ttatctgctg tgtgcgtgcg
     9121 gaagattacc aaccgttacc acaatatcaa gacgaacaaa aactgtacga tgatattgct
     9181 aatgcttata tcaaagcaat gcacaaattc tacgatatgg ggctacgtaa cttacaatta
     9241 gacgacacca gttggggaca attctgtgcc gaagataaac ggaaagagtt tgcagccaga
     9301 ggatttaatt taactgattt agcggaaaaa tatgtcgcat tattaaaccg tattgttgat
     9361 gcaaaaccgg cggatatgtc aattacgatg cacatctgcc gtggtaactt ccgttcttct
     9421 tggttctcgg aaggcggtta tggaccggtt gccgaagtat tattcggtaa atgccgtgtt
     9481 gacggcttct tcttagaata cgataccgaa cgtgcaggca ctttcgagcc actacgccac
     9541 attaaagatc aacaagtggt actaggctta attacctcta aatttggcga tttagaagat
     9601 aaaaatgtga tcattgagcg tattaaagaa gcggctcaaa ttgtgccaat caatcagcta
     9661 tgcttatcac cacaatgcgg ctttgcctcc accgaagaag gcaatatttt aaccgaagcc
     9721 gcacaatggg cgaaactaaa cttaattaaa gaaattgcgg aagaagtttg gggtagctaa
     9781 tcctctataa tacaaatagc cgagtaaata ctcggctatt ttagtttgtt ttaacattac
     9841 aaccagaaga gatacccaac agtcgcaatc acaaagatag agataatatt tagccagaaa
     9901 ccaactttaa tcatctcact ttgtttaatt tgccctgtac caaatacaat cgcattcggt
     9961 ggggtggcaa ccggcaacat aaaggcgcaa gatgctccta gaccaataat taaggctaat
    10021 ccgaccggtg gcatatttaa tgcttgtgct atagagatga aaatcggcac taacaaagcc
    10081 gcactggctg tgttagaggt aacctcagtt aggaaaataa taaatgctgc cacaattaaa
    10141 ccaattaggt aaaaatgccc cccttcaatt agtgagacga ccccatcagc cataattttg
    10201 ctcgcaccag tttgtcctaa tacagcactt aacgtcaaac caccaccaaa taggaataat
    10261 accccccact cggtgttttc ttgaatctgt tgccaatttg cgacacgagt aatgcaaata
    10321 agtgctgcgg caatcaatgc aagaatggtg tcaaagctcg caattttgcc attaattccc
    10381 agaaatgcag aaataatagg gttaatttta tcaccaaaaa tccaaccaag cgcaataaag
    10441 acgaaaatag ccaaggtgat aatacgagaa cgatttaatt caattttctc aaatgatcga
    10501 tcaaaactaa ctgaaaaatt tggtttaaat acgatatata gtgttgcaat cattaatggg
    10561 aataaaatta gcataattgg caaaccatat tttaaccaat cagcaaaagt cagattcaat
    10621 tgagaagcaa caatcgcatt cggtgggctt cccactaaag tacccattcc accaatactg
    10681 gcactataag caattcctaa taacacgaaa agataagtat tatggttttg tttctgatca
    10741 agtttactta aaatccccat tgccaaaggt aacatcattg cagctgtagc tgtattactc
    10801 atccacattg acaaaaacgc tgttaccgca aataaataaa taactgcaat cgataattta
    10861 cctttagcta atgccataat tttattggca atcatacgat ctagctgctg aatgtgtaat
    10921 gctgtcgcta aggcaaagcc tccaaaaaat aagaaaatcg ttggatcagc aaaagcaaca
    10981 agagcttctt ttgatttaac cagccccagt gctacagcca aaatcggaat taataatgcc
    11041 gtaaccgtaa cgtgtaatgc ttctgttagc cataagacgg caatgaaaat taacaatgcc
    11101 aaccccttat tggcttcagg ggtaaaaggc aaggtattta acaaaataat aaataaaata
    11161 gcatctgcaa caaaaatcaa gctattgcgt gtatttttac tcggttcaat aagaggagta
    11221 ttttccataa aaacctcaca aaatatagat aatcagtggt atcactatat ataaaaaaac
    11281 gatataggca aatataattg ttgcaaaagt gtgaagctca tcaaaaaatt taacactaaa
    11341 aaataaattg cttaaagata cagcaccttt gcaaaaataa atcaaaatta caccgcttgt
    11401 agcgaaaggt attcaatctc taacccaaat agtgattttg ccaatgcttg agtcattgca
    11461 taactactga gagagccttt cgcctcagcc agcacaactc gagtaacggg aatatcggca
    11521 agccctaaaa ataatcgata gttcaacgcg ctttgcaacg gtaaaaaagt aggattaaaa
    11581 gctgcattct cagtatattt accacaaaca atacgctcac ctacttgcag tgcaacccca
    11641 ctaaatgcgt tgctgtaagg ggcataagca ttattggcag caaaaattgc cgcttgttgt
    11701 aaatgatcgc ccttaacctc aaattgttgc ggttgttcat caaataagac tttctcaatc
    11761 cctaaatctt tcggtccaaa actatccggc aaatagctat ggagcaaatt attttggcta
    11821 tgcggtaaat gtacttttaa gcttgccgca ctgtttaatt cattcataaa ttggcggcaa
    11881 tgcccacaag gggtatagtt cacaaccaca tctgttatca aagtttcccc tgctaaaaat
    11941 gcgtgcgaga ttgcactttg ctctgcgtga acggattgtt gcatacattc cccggaaaac
    12001 tcttggtttg ccccaaaata gaaatctccg tttttgccaa tcgcaaccgc ccctacatta
    12061 aaatcggaaa ctggtgtaac cgcataacag gcagcaatgg caatgcaata taaagccaac
    12121 tcaacacgag agcgtttaaa tttttcacag agttcatcaa ccacttcgta agagagctgc
    12181 ccgtgaaaat cttgcttgat aagttgctca ataatagctt gtgtaacttc acagtttttc
    12241 gctgctttta attgttcaaa acgctctgta atgtctgttc gaaacatact gtacctccgt
    12301 ttaatgtttt ttatagctgc aaatcagtat ccctgccgta atcagtatgg cactaataat
    12361 atggtaagta tgaactgatt catttaataa aataatactg aacattgctg caaagagcgg
    12421 cgtaaaatta gtcattaccg ctcctttagc agaaccgact attgcaatgc cgaaattcca
    12481 aaacgcataa gagagaatag aagggccgat aaccaaatag cctatcccac tccattgtaa
    12541 agcggtcaaa tttgctaaat tttttgcaga ttctgctaca tattcataga taaaaaatgg
    12601 cgttaacgtt agaactgcca gccccactaa tacggtcaaa aacaccgtat tgcttatacc
    12661 ttgtggacgt agccgaatca cacaacaata aaccgcccag cttatagtag aagcaatcgc
    12721 ccataaatca ccttgattaa ttgccaagct gaataagcga gttagcttcc cttgcatcaa
    12781 tagccacagc actcccagca aactgattat tgccccactt agaataatcg ggctgatttt
    12841 ctccttaaaa acgagccgat ttaaaaatag caccaataca ggcgaaatag ctaaatagag
    12901 actcgcattc aatgctgttg tcgtttttaa accttcatat aaggtagccg ggaataaaat
    12961 taccccaagc agacctaata cccacatcac acctaaacga ggttttaata agtgcattac
    13021 ccgccaagtt gggcgaaaaa agagcaaaac taaaattaaa aaagccggca accaacgcaa
    13081 ataggttaag gtaataggct gaactgcccc acttaacact ttgcctaata caaaattccc
    13141 accccaaaaa agagtagcaa cgattaaact gaaatacccc aatttcagtg atgatgagat
    13201 cattgatgac ctcgttctac aatcacacct acactgcttg cttgggcaac cgctttcggc
    13261 ttatgcagtt caatccgaat ccaagaaagt tgatactctt tttgtaatag ttccgccagt
    13321 tgataggcaa cagtttcaac taatttgaaa ggttgagatt caacaaaatc cagcactttt
    13381 tgcgatactt ccgcataatt caagcaatat tgtacatcat cggtttctgc cgctttggaa
    13441 aaatcccacg ccatatcaat gttaaaaacc aagcgttgct taatcgtatg ctcccaattg
    13501 taagccccaa tggaagcaaa agcggttagt tctcgaataa aaaccttatc actcattttt
    13561 cgtcctgttt tattttctga atttctgtaa aatatagcac aagataaatt taatcaggaa
    13621 aatttatgaa tttaattccc tatttattga tcttaaccgc ctatttgctc ggctcgattt
    13681 ccagtgcggt cattttttgt aagctggcag gcttgcctga cccaagagaa gtcggctcac
    13741 acaatgccgg tgcaacgaac gtactacgaa ttggcggtaa aagtgccgca ttaggtgtgc
    13801 ttttattcga tattttaaaa ggcacattac cggtggcgat ggggatttat tttgaactct
    13861 ctccctcaca actcggtttc atcgccttag cggtttgtct tgggcatatt ttcccgattt
    13921 tcttccaatt ccgtggcgga aaaggcgttg ccaccgcatt tggtgcaatc tccgcattaa
    13981 gctttattgt tgcaggcggt gctatcggca cttggctact ggtgttttta atctccggct
    14041 attcttcttt aagtgccgtc ttcactgcct tggtcgtacc gttttacatt tggtggttcg
    14101 agccacaatt tactttcccc gtcgccttag tttgttgcct attggtttac cgccatcacg
    14161 ataatattca acgcttatgg cgtgggcagg aagacaaact gtgggataaa ttcaagaaaa
    14221 atagagcata aaaataggca tagtgaaccg ttcgctatgc ctatttgcaa attattgcgg
    14281 aaaaatcacc gcttgtcttc tcgactaaac cgctaaatct gcttcatctc ctcgattttg
    14341 tagccattgt ttacgatctt ccgctcgttt tttacccaat agcatatcca taatttcaaa
    14401 ggtattcaat tcgccctctt ctaccgtgtc atcaaaggtt aattgtacta agcggcgagt
    14461 gcttggctcc atcgtagttt cacgcaactg gctcgggttc atttcgccta agcctttaaa
    14521 gcgttgcaca tttggctttc cttttttctt ggcaaggcga gctaaaatcg cctctttttc
    14581 cgcctcatct aaggcataat gcacctcatc tttgccgata tcaatgcgat aaagtggtgg
    14641 cattgccaca taaacgtgtc cgttttgcac caatttcggg aaatgacgaa ggaataacgc
    14701 acacagcaag gtggcaatat gcaaaccgtc tgaatccgca tcggcaagaa tacaaacttt
    14761 gccataacgc aactcttcta aattatcgct atcagggtca attcccaagg ctaccgcaat
    14821 atcgtgtact tcttgtgaag ccaatacttg gtctgatgaa acctcccaag tgtttaaaat
    14881 cttaccacgc agtggcaaaa tggcttgata ctctttatct cgagcttgtt ttgccgaacc
    14941 gccggcagaa tcaccttcta ccaagaaaag ttcggtacgg ctgagatctt gagctgtaca
    15001 atccgccagt ttgcccggta aagccggacc actcaccaat ttcttacgca ccactttttt
    15061 cgccgcacgc atacggctct gggcggaact aattgccatt tcagcaatta atttacctgt
    15121 ctgcacattt tggttaagcc ataaactaaa ggcatctttc aaggtgctat ccacatagct
    15181 tgaggcttga cgggaagaca aacgctcttt ggtctgccct gcaaattgtg gctcttgaat
    15241 tttcagagaa agcacataag cacaacggtt ccacacatca tcagcggtta attttacccc
    15301 tttcggcaat aaattatgga tttcgcaaaa ctccaccatc gcctttaata aaccgttacg
    15361 caagccatta acgtgcgtgc cgccttgtgc ggtcggaatc aggttcacat agctttccgc
    15421 tactaactcg cccccttccg gcaaccaagt taatgcccag cttaccgcct ctgtttcagc
    15481 agtaacatca ccaataaacg gtggattcgg cacggtttca taaccgttta atgcctcgct
    15541 caaataatca gataagccgt cttcgtaata ccaactttct tcggtattgt tgattttatc
    15601 aataaaattg atggtgagtt tcgggcaaag caccgctttg gctcgtaaca aatggcgtaa
    15661 acgactcacc gaaaaacgag ggctatcaaa atattttggg ttcgggtaaa aacgcactgt
    15721 cgtgccggtc tgttttttcg ggcaagtacc aattaccgtc agatcttcca cttttacccc
    15781 gttggcaaag gcaatcgaat agacttctcc gccacgttta atctgaattt caacccgttc
    15841 ggacagggca tttaccaccg aaatccccac cccgtgcaaa ccaccggaaa acgtatagtt
    15901 tttattggaa aatttaccgc cggcgtgcaa tttcgttaag ataagctcca cccctgaaat
    15961 tttctcggtg gaatgaatat cgaccggcat tccccgcccg ttatccacca cttccaacga
    16021 attatcagca tgaagaatca catcaatttt atctgcaaag ccggacaacg cctcatcgac
    16081 actattatca atcacctcct gccccaaatg gtttggacgt gtggtatccg tgtacattcc
    16141 cgggcgaagc tgcaccggct cgaggtcttt cagaacggta atttcatccg ccccatagcg
    16201 tttttcagac attatgcttt ctcttaggct taaaataaaa taaggctgaa ttttaaggaa
    16261 tattcagcta ttttgcaaaa ttttggtgaa aaatgacctg ttgttatgca ataaaaacta
    16321 tttttgcgat ctacatcgaa aaaatgagtt ttaatttccc tatttgctta ttcattcagt
    16381 atcttaatct cactttttat tttaaaatgg tactatatta tggtagtaaa aatcctaaag
    16441 cggaaatctc aaaagacact acaacaaatc tacacccagc ctatttctgc caatattaaa
    16501 tggacaaata tagaagctct ttttctagag ttaggagcag aaatagaaga acgagaaggg
    16561 agcagaattg cagttgtttt atttcaacag gtcagagtat ttcatcgccc acacccgaat
    16621 cctgatacag ataaggggcg gtagcgagta ttaaaaaatg gttatctgaa aacggagtca
    16681 ttccttatgc gtaatattat ggatattaat ggttataaag ctgtcattgc ttacgatccc
    16741 gaaacagaat tatttcgagg tgaatttatc ggattaaatg gtggagccga tttttatgcc
    16801 gataatgtca ttcaattaaa aaaagaaggt gaactaagtt tgaatatctt tttagaactt
    16861 tgtagagaaa aaggtattga gccgttcaaa caatattccg gaaagtttaa tgttcgcctt
    16921 tcgcctgaat tacataaagc tgcggtaatt gcagcaactg ctgaaaattt aagcttaaat
    16981 gaatggatta accaaacgtt agaaaagagc gtgtagccta attgcaaaac aatcacctat
    17041 tttgaccgct tgtattaccc gtttaaccca ttcaatatcg aacactccga attggcgttg
    17101 ccacagcaag agctactcca gcttttgagc aaagtcagca tttggtttaa atcggcaatt
    17161 ttttgttcaa gctcaccgat atgctgttcg gttaattgtt ttacatctcg gcttgagcgg
    17221 tttgggttgt cgtttaattt aagtagttcg ctgatttgag ccagcgaaaa gcccactttt
    17281 cgggcattgc tgataaaatg taatcggctc aaatcagtag cattgtagaa tcgatacccc
    17341 gcttcggtgc gacttgtcgg cggcagaagt cctgcttttt cataatctcg gatttgtttg
    17401 gcggaaagcc cggttttttc tgcggcttgg ctaatattca ttataatcct ctcactttaa
    17461 tcgcttgacc ttaacctaag gttaagcttt attatacgcc tgaataatca ctcaaaacag
    17521 gagaaaatga tgacaattac cctacaactt gatggcttac attgtggcaa ctgtgtgaaa
    17581 agtgtcgaaa aagcgttaaa tggcgtggct ggggtgaacc aagttagcgt aacgttagaa
    17641 ccgcaaattg ctgtggtgga aggctcagca gaagcacaag ccttaattga agcggttgaa
    17701 gacattggct ttgacgcaaa attagcctaa ttaataaggg gcagaaattt tgccctaatc
    17761 tgcccaatat ttcggaggat aaatgacaag cacagctcac tattcgccag aacaacaact
    17821 tttgattgat ggaatgcact gtgccgcctg tgttcggcga gtggaaaaag ccttacttaa
    17881 agtggaaaag gtggaatttg cctcagtcaa tcttgccgat caaaccgctt ttgtgcaagg
    17941 caacgccaac cctgaagcct tggtagcagc ggtagttaaa atcggttttg gggcagaagt
    18001 gctggaaagc gaggaagaac gccgaattaa acaacaagcc caaacgcaac gagtgttagg
    18061 gcataaacgc actcaattta tgcttgccct tgtagttggt tttgccttag ttgcttttgg
    18121 gttctacaaa ggaatgacgg taaacgaaac caatcgttcg ctttggctca gctgggcagg
    18181 tattagcctt gcgacaatgt atttttcagg taaagatttc tttcttgggg cattttcagc
    18241 actgaaaaac cgctcagcca atatggacat gttagtagca atcagcaccg gcacggcttg
    18301 gctctattct tgttggctca cgcttttccc acaaccgaat gctcacgttt attttgaagc
    18361 cagcgtgatg attctcggct ttatcaatct aggaaaatac ttagaactga aagccaaaca
    18421 gcgttcctcg ctagcattgg aaaaattgct ggatctcgcc ccaaaacaag cggtcatttt
    18481 tgaagaaaat attgcaaaaa ccattccggc taaagcaatt aagccacaaa tgcgggtgca
    18541 agccttaacc ggtgaccgct tggcggttga tggtatttta gacagtggct ctatttgggt
    18601 tgatgaatca atgctcaccg gtgaagccct acctgtagag aaaaaaatcg gtgataaagt
    18661 gcgagccggc actctggtgc aagacggttc aggcacttac attgccgaac aggtcggctc
    18721 acaaaccgct ttggctcgtg taatcaatgc cgttcgccac gcccaaagca gcaaaccgcc
    18781 attggcacag tttgtagata aaatcgccgc tgtttttgtg ccggtggtgg tttcaatcgc
    18841 attactttct gcgttaattt ggctggcagt tgggcaggat tttgcctttg cactctcgat
    18901 ttttactacc gtgttgatca tcgcttgccc ttgtgcattg gggctggcaa ttccgctttc
    18961 taccattgcc ggcgtggcac gttctgccga atttggcgtg ctggtgcgaa atattgaggc
    19021 actacaagca agcagtgaaa tcgacaccct agtgttcgat aaaaccggca cactcaccac
    19081 tggcagaatg gaagtgtcgg atgttctcac ctttaacgga tttgagcaaa agcgcttgct
    19141 acaacttgct aaaagtgtag agcaacacgc ctcacacccg attgcgaaag cgattgcaaa
    19201 atttgccgaa aatcagaccg cttgtggtgt aaccgatgtg caagtgttga aagggttagg
    19261 catttcagca aaatatgaag gcagtacaat cagaatggga aattggcaat ttgtaggcga
    19321 aaccattcaa gcaaatcttg cctccctatt gcccgctaaa gagggggatt tttcctcaaa
    19381 aatttttgtt tcggtggata atcaactcgc cggtgtattg tcggtttcag accaacttcg
    19441 ccctgaagcg aaagcaacca ttcatcaatt ccaagcggaa ggctatcaat gcgtgatgct
    19501 gaccggtgat cgccaacaaa ctgccgacta tttcgccaac gcattggggt tagacggcgt
    19561 gattgcggag gtattaccgg agcaaaaagc ggaaaaaatt cgagccttgc aagcagaggg
    19621 taaaaaagta gcaatgattg gcgacggcat aaacgatgct ccagctctgg ctcaagccaa
    19681 tgtgggcatt gcgatgcaca atggttcaga tattgcagtg gaaaccgccg atctttcgct
    19741 gatgcgagaa gggctagcac cactgatgca aattctaccg ttctctaaaa aagtgctgaa
    19801 aaatatgaag caaagtttgc tcggggcttt tatctataat gttattgcga ttcctattgc
    19861 tgccggcgtg ctttaccctt tcaccggctg gctactcaac ccaatgattg ccgccattgc
    19921 gatgacattg tcgtcaatta ccgtggtgtt aaatagtcaa aggttgttga aataatttaa
    19981 gcggtcaaat ttgcatattt ttttgcaaat ttgaccgctt gtaatcacta atccgccaaa
    20041 aacagcggcc caagaggtgt tttcggaatg ccaaaatgct cagggtaatg cacctcgacc
    20101 aaatatagcc cctcggcttt cgctgtaggg gcagcttttt cccggtcacg ttgctccaac
    20161 acccattttg cccattccac aggctgtctg ccttgcccga tttcgagcaa tgttcccaca
    20221 atattgcgaa ccatatgatg tacaaaggcg ttggcttgaa tatcaacaat cacataattg
    20281 ccttgccgag acacatttaa atgatgaata ttccgccacg gcgtattaga ttggcatttg
    20341 gcggcacgga aagaggaaaa gtcattctcg cccagcaaat actgccctgc ttggtgcatt
    20401 ttgcgttcat caaggggaaa gtgaaagtgg gtaacacctt taggtaaaat tgccgaccgc
    20461 agtttttggt taaaaataat atagcggtaa cggcgggcgg tggcactaaa acgggcgtga
    20521 aaatcctcat tcaccgctac cgcccatttc accgcaatat catcgggtaa atgagcgtta
    20581 gtgccgaaac accagctttg tagcgggcgg tttgcttgcg tttcaaaatg cacgacctgc
    20641 cctgtgccgt gcacaccggc atcggttctg ccggcacaaa acacttctac gggcgaattg
    20701 gcaacaaccg acaacgcctg ctctagctgt tgttgtacac tctctaccgc ttcttgtcgt
    20761 tgccagccaa aataacggct gccgtcatat tcaataccta atgcgatttt cattttaata
    20821 ccttgataaa aagaggggcg aaaaattttt cgcccccaca gtaattgata tttgcaatta
    20881 tttattcaat aagcctaaaa attctttgcg ggtttctcgg tcttctaaga aaacaccgcc
    20941 aaaggcagaa gtaactgtat agctattggt gtcttttatg ccacggcatt tcacgcaaaa
    21001 atgggtggct ttcacataca ccgcaacatc gtctgtttct aaaatagttt gaaaggcagt
    21061 taaaatctgt tcggtaaaac gctcttgcac ctgcggacgt tgggcaaaaa actgcacgac
    21121 acggttgatt ttcgagagtc caatcaccca ttttttcggg taataggcta ccgctacttt
    21181 gccgtcaata gtaacaaaat gatgctcaca ggtagaagtt aaagtaatat cgtccaccag
    21241 caccatttca ctgactttca ttcggttttc aatattggta attttcggga aggtagcata
    21301 atcaagcccg ctgaaaattt catcaacata cattttcgcc aaacgatgag gcgtttcttc
    21361 taagctgtca tcacttaaat ctaaaccgag caattctaaa actgcctgca tatgctgctg
    21421 gatttctgct cggcgactgg ctttatcttt ggtatgagta acagtcggag tttcaatgcc
    21481 ttttgccaac aaggcttggc gaactttttg agcctccggc gaaagcgtgt tttctgtgat
    21541 agttaattcg ggcgagatcg ttgtcattgg ttttcctctc aaatgtaagc tgaagattct
    21601 aacaaattga catcaaaaaa aatagctcta aaatgagcta tttcagccat aaacaccctc
    21661 tttatttatg caaaatatac agtatctctt taatgccgac ctgattcccg aacatcaagc
    21721 tgaatttgtg cagtctctct taacttgcaa aaattttgac aattccgacc gcttgctagg
    21781 cttctcaaaa gggcgaggta cgacttggtt tttagatacc tctgctgaac taggtatcaa
    21841 tgtggtgctt cgccattatt atcgtggcgg cttgttcggt aaaatcatca aagatagtta
    21901 cttttttact cgctttgagg ccacccgagc gtataaagaa tttttcttac tgcaacaaat
    21961 gttagcttgg ggtttacctg tgcctcgccc tgtggcgatt aaaatagaaa gacatttttg
    22021 ttgctatcgt gccgacatta tgctcgaaaa gctagaaaac acacaagatt taagcaaaat
    22081 cttgcaatcc cattctttat cgaacgaaca atatgagcag atagggaaac tgattcgcag
    22141 tctgcataac catcaaattc accattccga cttaaatatc cataatattt tgcttggtaa
    22201 tgatggcaaa ttttgtctga ttgattttga taaatgcggc attgagccgg gcgaaaattg
    22261 gaagcaaaat aacctagacc gcctgttacg ctcgtttaag aaagaacaag ggcgattaaa
    22321 tattttcttc agcgaagaaa attggcaggc tgttttgaga ggatatactc tctaagaaac
    22381 aataatggca caagcttaga aacttgtgcc atcaaatcat caatattaac tacttcactt
    22441 cacgaatcat aatttcagac ggaatcacac tgccttgcca gtaaagttca gaagctactt
    22501 tttccgctaa tgcgaggtag gcttggctga tttcgtgttc cggagctgcc accaccgttg
    22561 gcacaccgct atctaaatct tcacgcagac gaatatgtag tggtaattgt gctaacactt
    22621 tagtgccata tttttgggcg attttttccg ctccgccggt gccgaaaatt gcctcatggt
    22681 gtccgcagtt tgagcagata tgcattgaca tattttcaat caccccaagc actggtactg
    22741 agactttctc aaacattgag atccctttaa tcgcatctaa taaggcaata tcttgtgggg
    22801 ttgttactac caccgcaccg gtcaccggaa tttgctgtga aagcgtaagc tgaatatcac
    22861 ccgtacccgg tggcatatca atgaccaagt aatccaattc attccaccaa gtttcattta
    22921 aaagctgact taacgcactg cttgccatcg ggccacgcca aatggtggcg ttatcttctt
    22981 ccattaaata gccgatagaa ttagattgca agccgtgagc ggtaatcggc gtgatgtgct
    23041 tgttatcagg agaagttgga cgttggtctt ttgctcccaa catatgcgga atagatgggc
    23101 cgtaaatatc cgcatctaaa atccccactc ttgtcccttg tgctcgtaag gctaaagcaa
    23161 gattaactga ggtcgttgat ttccctaccc caccttttcc tgaagtgacc gcaatgatat
    23221 tttttacccc attgactgcc gggtgtttat tcgcccgttt taaggtcgca atttggtaat
    23281 ttaataccca ttttacaccg cttgaacctg ttacttgctt taatttagcc tctgtttcgg
    23341 cttttaaggt ttcaaaacca ctgttccacg caaatggcat cgtgatttca attctaagaa
    23401 tatcgccccc taattctgct tttttaaacg cattaagggc aattaaatct ttctgtaaag
    23461 tcgggtggga aaattgttgc aagattgctt taatttcaac aagttgctgt tcatttaatt
    23521 ggttcattgg ttatccttgt ttgctaaatt gcgttttaaa tctttgctat aaattacttc
    23581 gctatcgtta ttcaaatcaa tacccaaaag ggaggaaaca atcccaaccc gatgatggta
    23641 ttgaaataat ggcaatacgg caacatcgct ataaagctgc tcgctaattt cttgaataag
    23701 tgactctctc gcttctgcac taagcgtttc tgtttgtaaa cgatttaatt tttgatcgac
    23761 tatctcactt ttatagccgg aatgattatc cgggctcatt gaatgaaact tctgcaaaaa
    23821 tacaatcgga tcaggataat ctgcacacca gcctgctcgt gctatctggt aatctttttg
    23881 ttcccttact ttatttaaag tctgccaatc aaccatttta ggtgtaatat taaataattc
    23941 tgattgagaa agggctcgag taacttggtt agcaatatta atgctattct catcatataa
    24001 caaagtcagc tttaaaggat tataagggct aattcctgct tttgttaata gctgctcaac
    24061 cacaacagga ttccaacgct tttctctatc ttttactaag ctatgtggaa ttacagactg
    24121 actcggaacc ccatattctt gcccactatt tgctgaagcc accattgtcc ttattgcttc
    24181 acgaatctct cgtttagcta ataatggatc atcaaaattg aactcatagt aataagagca
    24241 caaacgcgga aatttcacga tattcgtttt tttatttaat aaaggattct cgacaatatc
    24301 aaaagcagag cagttttgga tagttgtaat taaatcatac tctatagttt gaaagggaat
    24361 ttcttgggtt cgagccttta acaccatttt ttgagcatct agtttctcga gacggtaaga
    24421 cgcattgctc acgaagttat ctatggttgg agcaatccct tgataagtag gtaataatgc
    24481 ggaatgtgcc agcatttcag gcaattggtg atttgggtga tttagccgaa ttctcaatgt
    24541 atgcgcattt aatgcctcta caccgagttc ttcaactgac tttatttgct cttcaatcgc
    24601 ttttgcattt tctataccca tatagatgag atatttagac aatacagaat gattttgagg
    24661 atctattaaa cgtcgccagc ttgctacaaa atcttgtgca gtcacaggtt ggccattaga
    24721 ccacacagct ttctcatcta aaataaacaa ccactctttt tcatcttcag taaaccaatt
    24781 ctgagcaatg gccggaacga catcaccttt tctgttgtag gccgttaaac cgactaatag
    24841 atctcttaaa ggagcagcat ctgcagaagc tttaatttta tgtgggtcga gttgaaatac
    24901 agcagaataa attgcacgtt tgagtaaagt atcactctgc cggttttcta cccagacaga
    24961 ttgaatggat tgagggcaaa ttaattgatc acaagatgta ataagcagaa tgcaagcggt
    25021 aacttttgca atttttttta caaatgtaac cgcttgtaag gatttcaaca taaactcccc
    25081 aaaggttaat taagatttat tttacaagaa gcacaggaaa taaagttgta attcctgcca
    25141 caataatttc aattcccagc gccattaaaa tcagccccat gatacgagta acgacattag
    25201 atcctgtttt gcctaatttt ttcaccaaag gggctgaata gcggaataaa atataacaaa
    25261 ttaatgcaaa tacaataatc gcaatgctaa agccaacata gtcttcccaa gtatggtagc
    25321 gggttcccca cacaatggtt gagccaattg cccctggtcc tgccataatc ggcattgcta
    25381 atggcacgac accgatattt tcgtattcag taatatcttc atttttctct tctttatttt
    25441 gtttgtgttc acctaattta ccgctaatca tcgtcatcgc aatgcttaca atcaaaatgc
    25501 caccagctac tctaaaagag ctaagtgaaa tgctaaacgc attgagaatc agattaccaa
    25561 aatagaggct gactaataaa attactccaa tagaaacagc ggtgattaag ctggtgcgat
    25621 ttctttcccc ctcatattgg tgagcggtca tactgaaaaa aataggcaag gaaccaaaag
    25681 gattgactat agcaaataga ccaatgaaga attggaggta gatggcaaaa ttaataatga
    25741 tatccacaaa aactttctca aacaacagtg tttcgggcgc tattatatcg gttaatcaag
    25801 gtagatacaa accaaaagca cccagcctaa aggacggttg ggtgcttttt gataaaatga
    25861 aaggcttgtt agtgtgacga acgttgctgc ataaaatctt catttacctc aattgaagct
    25921 tttgcacgta gcgattgtaa gaattcatta cgtaaaatta aacgattagc ttgttcaaat
    25981 tgtggcgcca atgtcttaaa ctgttcagca ttcccttccg taatgttatc taaggcaaca
    26041 ataactacat cgcccttttg attacgtgcc atttgataag tcgttttatc ttgcgccttt
    26101 ttcattgcga aaatcgttcc agccaatacc gggttttcta cttctgcttg catataaact
    26161 aaagtttgtg gcgcattaaa tttcacgtcc actgatttcc cttcattcaa ggcttttaca
    26221 ttttcttcta ctttcgccag caacgctttt tccgcttttt ctgccttcac aaaattttca
    26281 actgctgctt ttgcttcatc aaaagtttgt ggacgttctg catcataatc actcactctc
    26341 acaaacaatg tctgtggatt tgcatcattc ccaacatcta aagcatcaga attttgttta
    26401 ttttggcgta gctctccttc aaacaaaact tttaatactt tctcattttg taaagcagta
    26461 ggtacgtttt cacgggtaaa cagatccgtt ttttgcagtt ccacattacc ggctttcgca
    26521 acttcttcaa gtgaagaatt attctcaaag gctttatttg ccatttcgcg cgcaactgta
    26581 aaatactcag ttaacactaa ttcttggcga atagtttggg caattttatc tttcacttgt
    26641 gctaactcaa tcacttgctc aggtttacgc tccaatactt tgatgatatg gtaagcatta
    26701 tccactttca ccgctgcact catctggccg gcagttaaat ttgctacagc atcttcaaaa
    26761 gctttcggga aagtgccagc ttttgcccaa cctagatcac caccattatt tgctgataaa
    26821 gtatcgctag atttgttttt tgccaaagta gcaaaatctt ccccattttt gagcgcttgc
    26881 tcaatagcct gtgcttccgc ttcactagcg acttgaatat gagctaaatg ggcttcacct
    26941 ttagttacat aatcggcttt attgcgatca tagtaagttt gaatttgctc attggtaatc
    27001 tcaactttgc tttccacatc ttttggagaa agagtaacgt actcaaccgc taatttttca
    27061 ggtgctaata atttagtttt atttgcttcg taataggctc gcaattcttg ctcggaagcg
    27121 gtctgatttt ccatttcttt tgcaactgaa aattcggcta aacgcacttc acgttgttgc
    27181 aacagtaatt ttgctaacaa tgcctgctgt gccggtacat taaaatcact attgataatc
    27241 ccctcttgta gctgggattg caacatacct tcctgcacaa tcgctgcata gccatcggca
    27301 cttaaattat tgtggcgtaa tgtttgttgg tataactcgt tactgaattt accatcttgt
    27361 tgaaacatct ggctgtttac aatttcagat ttgatttgat cagcactaat acctagtttt
    27421 aactcttttg catactggcg cagaagctct tcatcaatta atccatttaa taccgattga
    27481 ttaaattgag cagcatactc cgggctatcc attaaatccc aaaagcgact ccccagttca
    27541 gcatttaatc tattttgctc acgattaagc gtgttattaa ataattgctg actaatttct
    27601 tccccattta ctttcgctac agaattatct tgtgaaatca atcctgtccc aattccaccg
    27661 attacaaatg aaatagagac taatgcaaaa ataattttaa agaccggccc atttgtccgc
    27721 tcgtgcattt tttcaatcat ttaaaaattc ctaaattact caaaaattgt cgctgattat
    27781 actctttctc aaatgagaaa taaacttgca aatttttatt gaaatttaac cgctttctct
    27841 ttaaaattca cagtccctgt cgtagctgag ttagagatcg gctattgatg tattatcaac
    27901 ccttaacaaa aggaaattaa aatgtctcta agcgtagaag caaaagcaaa aatcgttgct
    27961 gaatttggtc gtgatgcaaa agacactggt tcttctgaag ttcaaattgc attattaact
    28021 gcacaaatca accacttaca agcacacttt gctgagcata aaaaagatca ccacggtcgt
    28081 cgtggtttat tacgtatggt ttcacgccgt cgtaaattat tagactactt aaaacgtact
    28141 gatcttgcta aatattcgga aactatcgca cgtttaggtt tacgtcgcta atttcaaata
    28201 ttagatatga gagccgagct gaaaagttcg gcttttttat aaattttatt cgaggaaaaa
    28261 atatggcttt tgcgtcatta tttacattat tagacgatat tgctgccgtg cttgatgatg
    28321 tatcgatcat gactaaagtg gctgctaaga aaacagcagg cgtaatcggt gatgatcttg
    28381 ccttaaatgc taatcaagtc agtggaaaga atgtggtgcc agaacgagaa ctaccgattg
    28441 tttgggctgt agcgaaaggc tcattaatca ataaagtgat cttgattcca ctagcgttgc
    28501 tgctatcggt ctttttaccg caggctatta tcccgctatt aatgataggc ggtgcatatt
    28561 tatgttttga aggcgtagag aaattactcc atcgtctatt acataaaaac aatcaagctc
    28621 attctgatga aaccgaaacc ctttctgaaa aagataaaat taaaggtgca attcgcaccg
    28681 attttattct atcagcagag attatcatta ttgcgttagg tgttttgcaa gactcttcaa
    28741 ccctaaccca aattttatct ctctccgcta tcggggtcgg aattaccctg tttgtttatg
    28801 gcttagttgg attaattgta aaactagatg atatcggttt atggttaatg cagaaaaaaa
    28861 gcacattctc acaagcggtt ggaaaaggct tattatttgc aatgccgtgg tttatgaaag
    28921 gactttctgt gattggtact attgcgatgt tcttagtcgg tggtggtatt tttacccata
    28981 atttaccaat gattcatcac ttcgtagaac aattcggtat ctctccccat ttttctactc
    29041 tggttgattt tgcagtgggt attgtggttg gtattattgc atgcttaatt attttacctt
    29101 tgatgaaatt attttctaaa aaggcgcact aatccccaaa agcgtagctt tggttaaagc
    29161 tagcttttta tctcttgcta taaaaaaata gcaggtttca agcctgctat ttttttaatt
    29221 attataatga gttagactca gtggctgttt gcggtaaggc taatggctca ttaactttag
    29281 actgagtagc catattcacc tgtttgagat tttcctcacg aatacggttt gccattaatg
    29341 tatcccccat ctgctctgcc acgtgcagtg ccataatacg atcatcagca acacattcat
    29401 catgagccaa taacaattca aactgagact tcgctttttg gtattgccca tctcgtgtat
    29461 aaatatagcc aagcgctcta gcataatcat cggtatattt aacattcgct ttatctgccc
    29521 gttttgctaa tacttttagt agcttactgt cagaatcaat ttgtaaacgg gttaattgca
    29581 caaataaacc ttgtaattgc tcatcttcaa atttcttcaa cgtttctaaa gcaatttctt
    29641 gtgcagattg atgatcgtca ctatcaatta aacgcttgat gacaccgaca cgactataca
    29701 ccgatttacg acgacgattt ggttggtttt cccaccaaga aagcaagcct tcctgccctt
    29761 cttcctgtaa acgctcatct tgtaaaccat catcaacgaa atactctaac tcagcatact
    29821 cttctgcagt taagaaatta cgttggccga tttcaactaa taatctatct aacgcaacat
    29881 aagctctgga ttctttataa atttgaatcg ctaagcgtaa tacctcatcg ctatgaggtg
    29941 caagctctag taggctatca atcgcagttc gggcagccgg taattttcct tgttgtaata
    30001 aaattcgggt tcgtaccaac tccactgcaa cattattcgg tccagctatt tcagttgcct
    30061 taattaaata tttatttgca gctaaatcat caccattttg ctgagcagct tccgccgctt
    30121 taattaaatt cagtacaggc tcatctgcat gttttgcatt tttactaaag agtttttccg
    30181 cttttgagta attcccttca ctcatacgca ttaaaccttc cagtgtttct tgctgagctt
    30241 ttttatgctt acgagttgag aaccagttat aagctccatt actcatacgg catattttag
    30301 tgacaatcca ttcaagtaaa taaactaccg ccattgccaa cacaaaaaaa accacaagca
    30361 ttacaatgct catttcaatc acggtagttg ctgtttcaat tctgacataa ccttgatttc
    30421 cggctaaata aggcccagag attagtccaa ctaataataa aagcatcaaa aagagcgttc
    30481 taaacataat ctattctcct ttttattatt gtgctgaaag aggcatcgca tcttgctctg
    30541 cttttacagg ctctgcttgc tctaattctt tttcagcttt tatttcgact ttctctattt
    30601 tttcaggggt tttattaagt tgctgagcaa tcacctttaa gctttgtaat gaagttggag
    30661 catccacata aatagtttgt tctgccaact catctagctc tttcaagaaa tgttgcacat
    30721 tttcatttga agtttcaaaa taacttctta cccaagagcc taccgtttgt aacgattttt
    30781 tataaagttc gctttgctgg cgaggaacag ctaaaatcgc aatttgtaaa cgcaagcgaa
    30841 tgttttcacg caaataaatt tcttgattcg gtgcaacaaa ggctttctca tctgctgcat
    30901 tacgtttcga tacacgaata aaatgatcta aaaatgaagc agcacttttt tctaaatttt
    30961 tctcccaatc cgcaagagaa tcacttactt gcccatcttg tttgctattt gaagcttgtt
    31021 cactttccaa aatcggcaaa tcatctaatt tattcgctaa atttgcgaca cgctgcatta
    31081 aggcattttg atcgatctga tgcaatgcgg ttaatgtatt taaatcagtt ttgattgcct
    31141 cacgaatgtg aatcgtattc ggtgcttttg ataaaacttg atctgcctct aacaataaat
    31201 ttttcgctgt ttcaatgtca ttatctaaca ccactttacg agccgcatta ttcaatagga
    31261 aatctgcctc agataatagc cagaatgtgt tatccgaacc agaggtatta tttagctttt
    31321 gcagttgaag ctgcaaacta ctaatttgct gggtataacc attttgggct gtttctaaag
    31381 ctttaatccg ttctaaagct ttttgatatt ccgtgaccaa ttcggcaatt tgtgcttttt
    31441 cattttcgaa atttggcatc tcaaccatag tttgagtagt aggctgattt gctttagcag
    31501 atactgcctg aatttgagat tcaacctctg caaacttttt atttgccata taatgaccag
    31561 ctccgccaac cgctaaagcc actaatagtg caactaatgc caagcccttt ccgcccgatt
    31621 tttgaacaac cacttgttct tttggcgctt tttgcatttc tgtttgaata tctttctcta
    31681 tagcttcgtt cactacatct tcctcaatct ctttttttgc aaaagatccc gctgaatcga
    31741 ccgcttgttg tgcctcttct accacctttt cagctgaatg ctctaaatgt tcagttactt
    31801 ttttagatct tgacatactc gccacctcta gttagatttg cccactttaa ataataatgt
    31861 attcatcaaa gttacattat cggctttatc cgatacccta atcttatctt cttgccagcc
    31921 catttgttta gctatctttg caatccgccg gctcactaca accagatcac attcaaataa
    31981 ccatgctcta caatctgctt tcgcttgttc ataaagtgat cttaaaattt cactactggt
    32041 gatcacaata gtatctactc ccaagcgttt acataagctg attttttcgg gaatatcatc
    32101 ggtaaccggc tctctacgat aacactccaa atattgaata gttgccccac gcaagactgc
    32161 agtttcagca agtagctcac gcccagaatc ggctcttaga attaaaatag ttttatcagt
    32221 tagattctgc atttcaggta atgccaaaac cccctcgcta ttttcaaatt ctatcggata
    32281 aatgaccgct tgttcagctt tttctgttaa atatttcgca gtccgttgcc ctaccgcaaa
    32341 atatttcaaa tctgaacgaa aatggaaccc ggtatctact aatgtttttg cagcatagtc
    32401 cactgcattc ggcgaaacaa caaatacata atcgtctgat tttagccgag aaatagccga
    32461 aggaagcaaa ggtaattctt taccggcttc aatcgtaaat agcggttgat gaatagcaaa
    32521 aatttgctgt tcattcaaca tatctaccaa ttcttgcccc cgactatcca ggcgtgtgac
    32581 caacacattc attattgtac gttttcgtta taaaccgcag ctaaaatttt atctgcacct
    32641 tgagcaagca actgttccgc caccaaaatg cctaattgct ccgcctcttg cttatgtcct
    32701 tttgccgaag cccgaataat ttgtgagcca tctaacgatc caactaacgc attaagcgtt
    32761 aattcatcgc cctctaatgt agcataacca ccaatcggca cttggcaacc gccttgcaaa
    32821 cgggtattca ttgcacgttc tgccatcacg caacaagcgg tcgaactatg gtttaatttt
    32881 gcaatgtagt tcaaaatccg ttcatcattg gctcgagtct caatccctac tgctccttga
    32941 ccagctgcgg gtaatgattg ttccacagaa atatagctac ggattcgctc ttgcaagcct
    33001 aaacgaatta agccggcaga ggctaaaata atcgcatcat actcgccatt atctaatttg
    33061 cttaagcgag tgccgacatt gcctcgcaat gatttaacct ctaaatgcgg atatttcgcc
    33121 attaattggc actgacggcg taagctcgat gtaccgacca cagcaccttt cggcaaatct
    33181 tctaacgaat ggtagttgtt cgacacaaac gcatcacggg gatcttcacg ttcacaaatc
    33241 accgcaagcc ccaagccttc gggaaagctc atcggcacat ctttcattga atgcaccgca
    33301 atatcagctc gattttctaa aagggctaat tctaactctt tcacaaacaa gccttttccg
    33361 ccaattttgg ctaatggggt gtctaaaata atatcgcctt tcgttaccat cgtaaccagt
    33421 tcgacagata attgcggaaa atgtttttct aattcgcttt ttacaaaatt tgcctgccat
    33481 aaggctaacg ggctttgacg ggttgcaatg cgtaaaatat ctttcataaa ttctaaaatt
    33541 aaaacattga gttaatgaat tatcctacca ctttttagct gaactgccaa aaataatcgt
    33601 ggatttcgct ttgcatttaa tcaaaaatcc gactttttct caaaatgtat caatgtctat
    33661 atgactaaat attttatagc atatatacaa cgttaaaaaa gttgatatag atcaaagcaa
    33721 acataaaaca ttattaattt ttaacgacaa aataactctt ttgggtaata atttcatcag
    33781 ttaaaaaaat tatcaaattt aaattttatg aggaaccaaa ctatggctaa aaatacgcaa
    33841 ccatttgatg cccaagcaga agtgaatgag cttgttgaaa aaggcttaaa agcccttgat
    33901 gagtttagaa aactcaacca agaacaagtg gattttattg tcgctaaagc ctctgttgct
    33961 gcccttgata aacacggtat tttagcaatg cacgcttacg aagaaaccgg acggggtgtg
    34021 tttgaagaca aagccactaa aaacctgttc gcctgtgagt atgttgtcaa taatatgcga
    34081 catttgaaaa ccgcaggggt cattagtgaa gatgatgtca ccggtattac cgaaattgcc
    34141 gaccctgtcg gtgttgtctg cggtatcacc ccaaccacca acccaacctc aaccaccatt
    34201 ttcaaagcgt taatcgccct taaaacccgt aaccctatcg tttttgcttt ccacccgtct
    34261 gctcaacaat cttctgccca cgctgctcaa attgtgcgtg atgctgccgt ggctgccggt
    34321 gcaccggaaa actgtattca atggattacc cagccttcaa tggaaggtac atctgcttta
    34381 atgaaacacc cgggcattgc aactatttta gccaccggcg gtaatgcaat ggttgaagcc
    34441 gcttactctt gcggcaaacc ggcattagga gttggtgcag gcaacgtacc ggcttatgta
    34501 gaaaaaaccg ctaaattaaa acaagcggtg tatgacattg taatgtcaaa atctttcgac
    34561 aacggtatga tttgtgcctc tgaacaagcg gcgattgtag ataaagaaat ttacgctgag
    34621 tttattaaag agatgcaatc ttacggcgtc tatttagtga acaaaaaaga gaaagcctta
    34681 ttggaaaaat acattttcgg tattgataaa gccaaagatg aaaactgctc aggtgcaaaa
    34741 ctcaattcag cggtggttgg caaaccggct gcgtggattg cagaacaagc cggctttaaa
    34801 gtaccggaaa aaaccaatat tctgttagcc gaatgtgcct ttgtgggcga agctgagcca
    34861 cttacccgtg aaaaactttc gcctgtactg gctctgttaa aatccgactc caccgaacac
    34921 ggtttggaat tgtctgaagc gatggtgaat ttccacggtt tagggcatag tgccgccatt
    34981 cataccgaaa acaaagcctt agccaaaacc tttggcgaac gggtaaaagc cattcgggtg
    35041 atttggaact caccatcaac ctttggcggt atcggtgatg tatataactc cttcctgcca
    35101 tcgcttacgc tgggctgtgg ttcctacggt aaaaactctg taggtaacaa cgttagtgcg
    35161 gtgaatttaa tcaatatcaa acgtgtgggc agacggagaa ataatatgca atggtttaaa
    35221 gtgccatcaa aaatctactt tgagcgtgac tcaattcaat atttgaaatc aatgcacgat
    35281 gtgcataaag taatgatcgt aaccgaccgc tcaatggttg atctcggctt tgtggataga
    35341 attaccgaac aacttcgcca acgtcgcaac caagtgatga ttcagttctt taccgatgtt
    35401 gaaccaaacc caagcctgca aaccgtacaa cgtggtacag aattaatgcg tagcttccag
    35461 cctgatacta tcatcgcact tggtggtggt tcaccaatgg atgcagccaa aattatgtgg
    35521 ttattctacg aacaaccgga agtcgatttc cgtgatttag tgcaaaaatt tatggatatc
    35581 cgcaaacgtg cattcaaatt cccacaatta ggcagaaaag cgaaatttgt cggcattcca
    35641 accacctccg gaacaggctc tgaagtcaca ccgtttgcag taattaccga tggcgatatt
    35701 aaatatccgc tcgctgacta ctcgcttacc ccaaccattg cgattgtcga tcctgcgtta
    35761 gtaatgtctg tgccgtctca cgttgctgcc gacaccggtt tagacgtatt aactcacgct
    35821 accgaggctt acacatcgat tttagccaac gactataccg acggcttagc cttgcaagcc
    35881 attaagttag tgtttgaaaa cttggaaaaa tcggtcaaag agtttgatga aaccgcccgt
    35941 gaaaaaatgc acaatgcttc cacaatggca gggatggcat ttgccaatgc cttcttaggt
    36001 atttgccact caatggcaca caaaatcggg ggtaaattcc acaccatcca cggtcgaacc
    36061 aatgcgattt tactgccaca cgttattcgc tataacggca cacgcccaac caaagtggca
    36121 acttggccaa aatacaccaa ttatgtcgca gatgtgcgtt tccaagatat tgccagaatg
    36181 cttggcttac cggcagaaac cccggaacaa gcggtggaag cttacgccca agcggtacac
    36241 gatttagccg ttcgttgcgg cgtgaaaatg tcgcttcgtg agcaaggcgt tgatgagcaa
    36301 gccttcttga atgcccgccg tgaacttgcc ctacacgcat ttgaagacca atgcacacca
    36361 gcaaacccac gtttggcaat gattgaagat atggaagcga ttatgactaa agcctactat
    36421 ggcaaggaat aaagcacaat ttaatcgtta aacttactaa atggccgctt gcaagcggtc
    36481 atttttcttg aaatttttac ttttcccttc acaaaatact ttcgctcttt tacaaagcat
    36541 agtattttta tcgctccttt tatcttacag gaaatactat gcaaattacg attttagacg
    36601 gcggaattag ccgtgaatta atgcgtcgca atgctccatt tcatcagcct gaatggtctg
    36661 ctgccgcttt gtatgaaggc ccacattttg tgcaagcggt acacgaagat tttatcgctc
    36721 acggggcaga agtgattact accgacagct atgcggttgt gccgtttcac attggcgaaa
    36781 aacgctttgc ggcagacggc aaaatgcttg ccgatttagc cggtcgcctt gccaaacaag
    36841 cggtcaaaaa ttcaggaaat attgcaactc aaattgcagg ctcacttcca ccaatgtttg
    36901 gctcttaccg tgccgattta attcaaatgg aacgctttgc tgaagtcgct cagcctttaa
    36961 ttgacgggct ttcgccttat gtggatattt ggctttgcga aacccaaagt gcgattattg
    37021 agccgatttc catcaaagca ttattgccga aagacaaccg cccgctttgg gtctctttta
    37081 ccctcaccga tgatgaacca accaccgagc cacaacttcg ctcgggcgaa agcgttaaac
    37141 aagcagtcga agaaatggtg aagttaggcg tgcaagcgat tttatttaac tgctgtcagc
    37201 ctgaagtgat cggcgaggca ttaagtgtaa cccaaaaaac tttagccgaa ttaaaagcta
    37261 cccatattcg cacaggagct tatgccaacg cctttgctcc acaaccaaaa gatgccaccg
    37321 ccaatgacgg tttagatgaa gttcgccaag atttaaccct ggaggcttat ttaggctggg
    37381 caaaaaaatg gacggaacaa ggggcaacta ttatcggtgg ctgctgcggc attggggttg
    37441 agtatattga aacgctggca aaaaatttaa aataaggaaa tcgaatgtca aataaaaaaa
    37501 taggattaat ttcactcacc gccttagtgc taagctcaat gattggctcg gggattttca
    37561 gcttaccgca aaatatggca gccgttgccg gagcagaagc cattaccatt ggctggctga
    37621 ttaccggtgt cggcattatc tttttaggtt tatcgttttt ctttatttcc cgcttgcgtc
    37681 cggatttaga cggtggcatt tacacctacg cacgggaggg ttttggcgag ctgatgggct
    37741 ttatgtcagc gtggggctat tggctctgtg ccaccattgg gattgtagga tacctcaccg
    37801 ttgcttttga aggtttgggt gtatttaccg acaacccgaa caccgtgatt ttcgggcaag
    37861 gtaacaccct cgcctctttt attggatctt caatcattgt gtggctggtt cacgccctca
    37921 tcgcaggcgg tatcaaagaa gctgcctttg taaacttaat tgccactttt gtgaaagtcg
    37981 ctccgctcat tctgtttatc gggttaggca tttggtattt cgatgtggat ctgtttaata
    38041 gcgatgttaa agccaccgca cttaataata gtgtaagcga ccaagtgaaa agcacaatgt
    38101 taatcacctt atgggtattt accggtgtgg aaggggcttc tgtgctgtcg gctcacgcga
    38161 aaaagcgttc tgacgtggga ctggcaaccg tattaggtat tattattgca cttgctcttt
    38221 atgtggcaat taccattctt tcactcggaa ttctgccacg ggaaactatt gccaatatgg
    38281 caaatccgtc aatggggccg ttgctcgatg caatgatggg cccaaccggc aaagtgatta
    38341 ttactgcttg tttaattgta tcggtgcttg cctcttacat tagctggacg atgtattcgg
    38401 cagaagtgcc ttatcgtggc tcaaaaaacg gggctttccc gaaaatttta gacaaagtga
    38461 ataaaaacgg cacgccgatt aactcactct ggtttaccgg ctttatcgtg caattttgct
    38521 tggtgttggt gtttgttttt gagcaaagct ataacacctt attgctgatt tccacctcga
    38581 tgattttaat tccctatttc ttaatcgggg cttatttatt caaattagcg attcaaacca
    38641 acgccacttg gtacattaaa ctcaccggct ttatggcagc cctttacgga ttatggattg
    38701 tctatgccgc aggactagaa tatttgctgc tttcggtggt gctttatgta cccggaattt
    38761 tactcttcct ctactccaac tataaattca acggcagatt aaccctttca accgctgaaa
    38821 aggtcatctt aatcgtgcta ctggtaattt ttggctatgc cgtgattgag ctgccagcac
    38881 tattagcagc ataattccca tcaaaaatga ccgcttgcaa gcggttattt ttctaggatc
    38941 ttctgcaaag attcattaga atagaaacaa cgtcaataat aaataaaaag aggagaaaca
    39001 atgcaaactt atcaacataa agccctttgt cgggtaagaa ccattaccct ttttctgagt
    39061 ttaaccaaag ataaattgca gtgggaaacg gcattaaatg cggcaaaagc agaatttgat
    39121 ctattagttc ccgctattca aacacaaggc tatcacatac aatcgattcg aatcgttacc
    39181 aacagtttcg gggaatatct tgatctcact aatattgaaa cagcgaaaca ggatttagcc
    39241 tatcttaaac agctattaac ccaacttaac gatagcggtt tacgcattcg ctttgccatt
    39301 ggtgaggcaa aaacacccca cgaattagca ttactacctg agctgatttt aaattatggt
    39361 gatttatcta acgcttgtgt caatattgaa cccgatgaat ttgggatttt agacaatgaa
    39421 accattttac aatctgctca aattatcaaa caaatcgctg aaattacccc aagaggtgaa
    39481 ggcaatttta attttacggt gaattttaac tgtaaacctt ttattcctta ttttccggca
    39541 agctaccatt caagcaagct ccctaacagt tttgtgatag gcctagaaac accagatcta
    39601 ttagtagcgg tgttaaaaga gctgaaagcc agcccacata acgactttta tcgccaatgc
    39661 tatgaaacga tgtctcaagc cttgcaatat cacgttgatg aagttctcga agcagtaaaa
    39721 tcggtacaac acaaattaca atttgccttt gctggcattg atagttctgc tgctccgtca
    39781 aaaaactgtg cctcaatgac agaagtttat gaattaatgg gcgtaccatt ttttggggca
    39841 gccggaacag tagaagcctc ttcacttctg acaaaagtct ttaaatctat caaacatgta
    39901 ccgcttgtcg gtttttcagg tttaatgttg gcagtaaccg aagatttagg cttagccgca
    39961 ggcacacaca aagcccaatt cgacattcgt gctttactaa cttatagtgc tgtttgtggc
    40021 attgggttag ataccgtacc gatttccaat gaagccactg ttgaacaaat tgccgcatta
    40081 atgcgagaca ccggcacaat ggcatttaga ctaaataaac cgcttacagt acgtttattt
    40141 ccaattccga ataagagtgc tggggaagtg acagaatttg aaagtgatga tttatgtaac
    40201 tgccgaattt tagctgtacc ttaaaataaa ggctgatgga tatttccatc agcctttcaa
    40261 tttacttcac cttcaatttt ttacctaccg tgatctgata atttttcaaa ttattcagct
    40321 cactgatttt ttgcggcgta gtaccgtaag ctctagcaat cgagtaaacc gtttcatctt
    40381 gttggacaat atggtagcca ctgttagaca ccttaatttc tctttgagag tctgattttt
    40441 tagactgatt tttttgatct ttctcaagag ctgttttttc ttttagttgc tgctcttttt
    40501 tcttattggt tttagccgaa tcttcttttt tatcctcttt tttgctcttt tctttcaatt
    40561 ttgtcttatc tgattgcgta ttcttctctt gtttctcaga agcaggcttt ttagttaaat
    40621 cagctttagc agttttttcc tctttcttat tttgcttatc ttctttgtcc gattttttac
    40681 tgaccgaaga actagcaact gcattttttg cccgataagc gactaatcca ttataaatgg
    40741 cccgagcaac ttgtttacga taatttgcac tggctagctt tgcttcctcg gttgaattag
    40801 ataaaaatcc cgtttccacc aatacagatg gaatatcagg tgaacgcaga acacttaagc
    40861 ttgcgtgctg aggagacgat tttgctaatg cagccacatt tgacatttta gctaaaatgc
    40921 tcttgcctaa ttcatagccg gcacgttgag agtgagagaa ctgtaaatca agcactgttt
    40981 gatttaaata acgttcattg ttgcttgaaa gcaccgaacc agccccgcca agtaattccg
    41041 actgcttctc gtggtcttcc aaccatttac ccatttcatc gctagcacgg ctattagaaa
    41101 gtacccaaac cgaagcccct ttcaaggaat cgccacgagg cgaagagtct gcgtgaatag
    41161 aaaccagcag atcggcacga tgcttacggg caatctcggt acgttgcggt aattggataa
    41221 aataatctcc cgagcgtgtc atcactgctt taaaattagg atcggcatct aacaaggctt
    41281 ttagctcttt agaaattgcg agggtaacgc ttttttccaa aatccccaga tttttaccaa
    41341 tagcccccgg atcttttccc ccgtgtccgg catcaatcgc cacaatggtt ttggcaaatg
    41401 tggaaaaact gaataaactc aatgtgctaa aaacaataaa tctgataact tgcttcatta
    41461 cctcccctac aagcggtcta tttttgatga aaatttacta atatatctac tgcagtttga
    41521 ttttgcggca acaggctaat ctgccgtccg tcattcttat aatcaatttg gatcacaaaa
    41581 tcagcctctg gaatcattcc tttaccttta actgcccatt caagcaaaca aagcgtttgt
    41641 ggtttgaaat aatcacgaat tcccataaac tccagctctt caggatcggc taagcgatac
    41701 aaatcaaaat ggtaaaggct gaaaggcgga agttggtatt cttccaccag agtataagtt
    41761 gggcttttta cattgccttg atgcccgaaa gcccgtacga tcgagcgggt taaggtggtt
    41821 ttacctgccc caagttcgcc gtttaggtaa acaaccagcg aatgagcttg gtcttgcaat
    41881 aaatatttct taagttctaa cgcgaatgat tgaccaaatt ccagcaattt agtttcatct
    41941 tcgcagtaaa aagagagaga atctgtcatt atttttggtc tagctgaata aaatgttccc
    42001 gataaaattt caattcgtta atggattcac gaatatcgtc caacgctaaa tgcgtattgc
    42061 ctttactgaa tttatctaaa atctccggtt tccaacggcg tgccagctct tttaaagtac
    42121 tcacatctaa gtggcgataa tggaaataat cggctaaatc aggcatatat ttatacaaaa
    42181 aacgtttatc ttgagcaatg ctgttgccgc aaatcggaga agcgcctttt ggcacccagc
    42241 gttttaagaa gtctaaagtt tgcaactctg ctgcccgttc agtcaatttg ctcgctttca
    42301 ctcgttcaat cagcccgtta gcggtatggg ttttgacgca ccaatcactc attttctcta
    42361 ataaatcatc ggtttggtgt accgcaagta ccggtccttc cgctaaaata tttaaatcct
    42421 tatcggtcac aatggtggcg atttcaataa tgcgttcttt ttccggatct aaccctgtca
    42481 tttcaagatc gatccaaatt aaattttgtt cgttttgagc cattttattt ccttacactt
    42541 ttgcaatttt tagggcattt ttgaccgctt gcggcacaaa ttggctgatg tcaccattgt
    42601 ggcgatagat ttcccttacc atcgttgaag aaaggtaacg ccattctatt gaagggggaa
    42661 aaaaaatagt ttctaaatcg cccgataatt tgtaatttaa ctgagcgagt tggatttcat
    42721 agtcaatatc atctgcccca cgaataccac ggattaacgc tttggcattc tgctgtttgg
    42781 caaagtctgc taacaatcca ctaaagccaa tcacctcaat attttgccac tgggtacagc
    42841 tttgtttaac aagctccact cgttcttcaa gactaaaaag cggctgcttg cttgggtttt
    42901 gagcaacggc aacaatcact tttccaaata agtgagaggc tttgcaaatt atgtccaaat
    42961 gcccattggt aatgggatca aaggtgcctg cataaattac gttataactc attttatttc
    43021 tctaaatagg aggctaataa atccaaatgg cgttttaatg ccccttgatt ttcctgtaac
    43081 acgcttaagc cggattttgc aatttcttgt ccgatttggg gctgcttaag caataattga
    43141 atgctctcgg tcaaagcctc gactgaactt tcaatttcaa tcacgccttt cacctcacgc
    43201 aatttctcaa agatttcagg gaaattatag gtgtaaagcc cagaaaccac cggaatatta
    43261 aaagcgattg gttcaagtgg attatgccca ccgtgtttga ccaaactgcc tcctacaaaa
    43321 gcaatgtcag acaacccata cagtaacatc atttccccca ttgtatcacc taacattact
    43381 tgagtatttt ggcttaacgt tttattctca gtacgtttta cataatttaa atctgatttt
    43441 tgaatcagta gctcaactaa accaaaacgc tccggatggc gaggcactaa aatcaacact
    43501 aaattcgggt aatgctctaa taagagttta tgagcatcta aaatcagctt ctcttcccct
    43561 tcgtgagtac tgccggcaat ccaaatcggt ctctctgtta aattcagact agctttagtt
    43621 ttaatcaccg attgatgaag ctgtggcgta atttctaaat caaatttcag gttaccggta
    43681 ttaaccattt ttgccggtgc ataaccgagt gctaaatagc gatctcggct tacctcatct
    43741 tgagccataa tcagactaat ttggttgagc atatccttaa tgctaccttt tacccagcca
    43801 taacgcttcg cagaacgtgg cgataagcgg gcattggcaa tcacaaatgg aattttacga
    43861 atatttactt tacgaattaa attcggccaa agttcggttt caattacaat catcaatttc
    43921 ggatcgataa aattcaaaaa ccgctcgata gcatcaggta agtcataagg caaataaaaa
    43981 tgtgaaacac tattaccaaa agcagcttgc acacgcccag agcctgttgg cgttaccgtt
    44041 gtgactatca acggaagttc aggatattgc ttgctgactg ccttaatcaa aagcgttgca
    44101 gcaatcacct caccaaccga tgccgcatgg attaccaccc cttttgcttt cggtttttcc
    44161 gattcgtcat aaatcccata acgctcccat aaacgtttcc gataagccgg ttgtttacgc
    44221 cctttgtacc acattaatag cagaaccaca ggctgtaata gataacttaa acaaatatag
    44281 agtaaacgta gcatttattt tccttatacc ataaccctca cctcttgtgg gagagagtca
    44341 aatacgccaa taaatcgttc ctctcttgtt cgagaggggg gaacaagcgg ttatttttac
    44401 caaaaatttt gcaatctata tcctcaaaga caaaaccacg gaataacctt aatccgtggt
    44461 ttatctcgca tcattacgct tgatgtggat tgcgggtatt cgtattcact aagttacgca
    44521 ttaaaagtgc aaaatccaac tcaatatctg ccggcacatc taaaaagaca aaatgcccgt
    44581 caccgagtgc tgcgtccaca ttttcatttt tgcggttaag catacgctcg attttaaata
    44641 caatgttgcc tttaggggtc atcatttcca ctgaatcgcc cactaagaat ttgtttttca
    44701 ctgccacttc cgccaagcct tctgcattgc gtttgccggt aaattcgccc acaaattgtt
    44761 ggcgttctga aatcgaatag ccatattcat agttttggta ttcatcgtga gtatgacgac
    44821 gtaagaagcc ctctgtataa ccacggtgtg caaggctttc aagagtatcc attaaacttt
    44881 cgtcaaacgg tttaccggca gcggcatcat caatcgcctt acgatacacc tgagccgttc
    44941 tcgcacagta atagaacgat ttcgtacgcc cctcaatttt cagtgaatgc acccccattt
    45001 gagttaaacg ctcaacgtgt tgtactgcac gcagatcttt agagttcata aaataggtgc
    45061 cgtgttcatc ttcaaaggcg gtcatttgct catcagggcg ttgtgattct gtataaagga
    45121 acactttatc tgttgcttcg ccattaccta gagtaggagc cacatttttg acttcaattt
    45181 ccggctcata cttaggcaca atttgcccta cctcatcaat cttaccttct tccattttat
    45241 attcccaacg gcaagcattg gtgcaagtgc cttggtttgg gtcacgctta ttgatatagc
    45301 ctgaaagcaa gcagcgacct gaatatgcca tacacaaagc accgtgaacg aagatctcaa
    45361 gctccatatc cggcacttgt tcacgaattt cttcgatctc ttcgagtgat aattcacggg
    45421 ataaaatcac acgggttagc cccatttgac gccagaattt caccgttgcc cagtttaccg
    45481 cattggcttg caccgaaaga tgaatatcca tttcagggaa attttcacgc accaacataa
    45541 ttaagcccgg atcagacata atcaaagcgt ccggcttcat atccactacc acttttagat
    45601 ctttgatgaa ggtttttaat tttgagttgt gtggcgcaat gtttaccacc acatagaatt
    45661 tttttcctaa ggcgtgggct tcatcaatcg caacttttaa attggcgtgg ttaaattcat
    45721 tattacgcac acgcaagcta taacggggct gtcctgcata aatcgcatcg gcaccataag
    45781 caaaagcgta acgcatattt tttaaagaac ctgcaggcga aagtagctca ggtttggcat
    45841 attttaaagt catattattc tcttttctga taacaagtca ggacttctcg acgtgagaag
    45901 cgtaagcggt atattttcta agaaatattg cgtgatggca agctaatcca ttacaatccg
    45961 atttttatgt ggggaacaat atgaaactta aatacctttt agcaacaaca ttactggctt
    46021 tttcaacatt taccgccgct caaagcatca agacggagat gatgcaaatg aatatgcaag
    46081 cgaataaatt gatgcgtgcc gaatcggcag aagagtttag cgaaattgcg aatgatttca
    46141 ttataattac cgagaaaacc aaagggattt ttcccaatag cgtagaaggc gataaagcag
    46201 ctcaggaaga ttaccaagcc ggtatgcaaa aattaattga tatggttaat caagccagtg
    46261 agaaagctca agcaggtgaa ttgcaagaag caaaaatgct gatttccgag cttgaaatga
    46321 tcaagcgtga atatcacaaa aaatacaaat aattcaacac attaaaaggg tgagctaaag
    46381 ctcacccttt ctattcaaat tccagttcaa ccgaattctc accaagaagt gcctttaatt
    46441 cgctaaacat tgcctcattc gggctgattc gccactctac tccgcctttg agcaataccc
    46501 taccttccgg gctttggtaa taaaaatgca gcggtaaagt gccttcttta tgtggggtga
    46561 tgatagcggt cattttttta ataaaatctg cagaaagttg ctctttgcta atcgctaacg
    46621 ctaaactttt ggcaaatcga ccccttgctt catcaaggga taacacttct cgagccgaca
    46681 ttttcagtcc accgctgaaa tcatcaaact gtaccgaacc tgttgccaca ataatttggt
    46741 cttgttgcat caaatgcccg aaattttcta aggcttccga gaaaagggta atgtccaatt
    46801 tccccgagcg atcttcaata gtcgcaatcc caatacggct tcctcgcttg gtaactgcca
    46861 ctcgagatgc cataacaatt cctgaaaccg tggtcatttg ccctcggaaa gtcggttgca
    46921 attcattcag ccgattaggg gcatagtggg ataattcttt gaggaatcta ccaatcgggt
    46981 gtccgcttaa atacagcccg agcgtggcac gctctccatc taaaatcact tgctccgacc
    47041 attttggcgt attggcgtaa gcattttgca cttcttccgg tgtctcggta agcacgccaa
    47101 acatatcgct ctgcccgagt tcctccattt tagcgtgctg atctgaggct ttaagtgcat
    47161 cttccaaatt cttcatcaag gcagctcggt gagggcctaa tttgtcaaaa gcaccggaca
    47221 taatcaggct ttcaaaggtg cggcggttga tttttttcag atcgacccga gcggttaaat
    47281 caaatagatc tttaaatttc ccctcttttt ggcgagctgc cagaattgcc tcaatcggtc
    47341 cttccccaac gcctttaatt gctcctagcc cgtaaacaat ttcgcctttt tcatttacgc
    47401 taaaacgatg tttaccgctg tttacatcag gcggcacaac ggttaagccc atattcatac
    47461 actcatcgta gaacccgaca attttatcgg tattatccat ctctgaggtc attaccgcag
    47521 ccataaattc tgccggataa tgggctttta gccaaagtgt ttggtaagaa accaacgcat
    47581 aagctgctga gtgagattta ttaaagccgt agccggcaaa cttttctacc aagtcaaaaa
    47641 tttgaccggc aagtttaccg tcaatccctt tggcttccgc ccctttttca aacacttcac
    47701 gctgtgcagc catttcctcc ggtttcttct tacccattgc acggcggagt aagtccgctc
    47761 caccgagtgt ataaccggca agctcttgtg caatttgcat aacctgttct tggtaaacaa
    47821 tgaccccata agtcggctcg agaataggtt ttaagcattc gtgttggtat tgcggatcag
    47881 gataagaaac ctcttctttg ccgtgtttac ggtcaataaa gttctgcacc atacctgatt
    47941 ccagcggccc tgggcggaat agtgccacca atgcgataat atcttcaaaa cagtccggct
    48001 tcaggcgaga aattaagtct ttcattcccc gtgattcaag ctggaatact gctgtagttt
    48061 tagctgccag caacagagca aaggattttt tatcatcaag cggaatggtt tcaatccgaa
    48121 tcggctcttt gccttcacga gccaaacgtt cgttaatcat ctccaacgcc catttgatga
    48181 tggtgagcgt acgcaagcct aagaagtcaa acttcaccaa tcctgcatat tccacgtcat
    48241 ttttatcaaa atgggtaacc gggtgtaagc cctcgctatc gcaataaagc ggcgaaaaat
    48301 cggtaatcgc agttggggcg atcaccacac caccagcgtg tttacctgca ttacgagtta
    48361 caccttcgag cttacgagcc atatcaataa ggtctttcac ctcttcatcg gcttcatata
    48421 gctcaggcaa ttttggctca gcggcaaagg ctttttcaag cgtcattcct ggatcgggcg
    48481 gaatgagttt ggagatgcga tccacaaagc tataggggtg tccaagcact cgccctacat
    48541 ctcgaatgac cgctttcgcc gccatagtac cgaatgtgat aatttgcgat accgcttgtc
    48601 gcccgtaggt ttccgcaacg tgttcaatca cacggtctcg cccgtccata cagaaatcaa
    48661 cgtcaaaatc gggcattgaa acacgctcag ggttgagaaa acgctcaaaa agcaaatcaa
    48721 attccaatgg gtcaagatcg gtaatcttca acgcataagc caccaatgag cctgcccctg
    48781 agccacgacc cggtcctacc ggaatatcat tatctttgga ccattggata aactccatca
    48841 cgatcaaaaa gtaacccggg aaccccattt ggttgatcac atctaattca acttgcaatc
    48901 tttcgtcata aaccgaccgc ttgttcgccc tttcctcagg atcagggaat agaaactcta
    48961 aacgctcttc taagccttct ttcgattttt ttaccaagaa atcttcggtg gaaagctcac
    49021 cggtcgggaa atttggcagg aaatactcgc ccaaacgcac ggtaaccgaa cagcgtttcg
    49081 caatttcaac cgtgtttgcc aatgcactcg gtaaatcggc aaacagcttg cacatttcct
    49141 cttcagtacg gaaatattgt ttcggtgagt attttttcgg gcgtttcggg tcgtctaggg
    49201 tgtagctgtc gtgaatggca acccgaattt cgtgtgcgtc aaagtcatct tctttcaaga
    49261 agacaacatc atttaccgcc actaacggaa ttgcattttt ttgtgaaaat tcgaccgctt
    49321 gtttgatata gcgttcttcg tctgcccgtc cggtacggca aacggaaagg taaaaatgat
    49381 tcgggtaata ttgctgataa aaagctaatt tttcttcagc ttcttgtcgg ttttctttga
    49441 gtaaggcttt acccacatcg cccattcgcc cgccggaaag aatgatgatg ccctcattca
    49501 gctctgctaa ccattcacgt tccaccatcg gaaattccac atagccttgc tgataggctt
    49561 tggacaaaat ttgggtaata ttatggtagc ctttgttgtt cttcgccagt aatgtcagct
    49621 caaaataatc ttcattgccg ctctcggttc taacataaac atctgccccg ataatcggct
    49681 taatccctgc tcccaatgct tcgccataga atttcaccaa cccgcaaaag tttataaaat
    49741 ccgttaagcc cattgccacc atattattag cggcagcggt tttaactaag gattttacct
    49801 tagctaaacc attaatcatt gagaaatcac tgtgaacttt taaatgaacg aaacgacaat
    49861 ctgacatagg aatataatct aagtaaagaa gtttcccctc tttagtaaag actgtcaggt
    49921 tctaaaaagt gaagccttct gtgaataatc ccgttgggcg aatgttattc gcccctacaa
    49981 acgagcatta ttcttgctca gagttacatt taaaatccga atgtaggggc gaattacatt
    50041 cgccctttca gaacctaaca accctgcttt atctaaagaa gggagttaaa attaatcacg
    50101 ttttttgctt aacagccacc aaacgatgat caaacagagt aggcttggaa ttaatgctcc
    50161 aaccggtata ggtaaccaag tggcaattaa gcttaaattg ccaaacacaa tatttgccac
    50221 atagaacata aagccggcaa caataccaat cacaattttc gcccccatcg tactactacg
    50281 aagcggcccg aaaataaagg agatcgcaag tagcatcatc accgccattg agattggttg
    50341 gaatactttt cgccagaagg tgatctcaaa acgtttcgga tcttgtccgg tatcttttaa
    50401 gaagccgaca taatctgcca agcctgaaat cgagagcgac tccggtttga gtgaaacaat
    50461 gcctaatttg ctaggggtta aactggtttg ccaaacttga tctggctgtt tagcttgctg
    50521 gatctgattt tctcccacag tcgatttttc cactttagat agcacccagc ctttttcatc
    50581 actgtaattc gcagttcggg cttttaaaac agattgcaat tcacgtttgt tttgtccttc
    50641 gccgaattga taaatcagta cgttatctaa gcttttttca tttttaatat gattaatata
    50701 gataaatgaa ttgccatctt tcgcccaaaa cccgtctttt gtggcaagca ttgagccgcc
    50761 actttgggca atcgaacgca tattacgggc aaactgctcg gtttgtggca cgccccattc
    50821 gccgataatc atcgtaaaaa tgactaacgg taaggcagtt ttcatcacgg ctaaaccaat
    50881 gcggaaacgg gaaaaaccgg aggcttgcat caccaccaat tcactaaggc tcgctaggtt
    50941 gcctaaaccg agtaatgagc caagtaatgc cgcaatcggg aaaaaggttt cgatatctcg
    51001 tggaatagtt aaaaaagtat agtatgccgc ttttaagcca tcgtaagatc cacgtcctac
    51061 atcacgaaac tcttccacaa atttaataat cgccccaagc ccaatcaaca taaacagggt
    51121 taaaaaaatc gcggataaaa tcgttttgcc gatgtagcgt tctaaaatat tcattgagaa
    51181 aaattgcatt atgccaccgc cttattggtt aatttttttg caccaaattg atagcgtaac
    51241 ttagacataa atttactatc ccacgcattt aaaataacac ctaaaactaa aaaggcaact
    51301 gataccaacg gcattaacac ttccgcattc aacttgcctg atgcccctga cgattttagc
    51361 gagctttgta gtaagaaata gattaaataa agcaataacg ccggcagtag tttagcaaaa
    51421 cgcccttgac gagggtttac actactcatt ggcaccgcta ataatgccat taacggtaca
    51481 gctaaaatca aagcaagccg ccaatgaagc tcggcttttg cttccggcgt tttggtttcc
    51541 attaatttct tgaaatcggc tcgttgcact aatttctcat cagattcaac gtcttgatag
    51601 cctaaataag cagaataatt ctcaaaatgt gaaatacgga aatcggcact ttgtggtgta
    51661 ccttcaaaac gcttgctctc tgccaaggtt aagacttgat ccccatttgg caaaccttgc
    51721 aacgtgccgg attcagcaac aaccactgaa ggtttgtttt tcttctgctg ttccggctgg
    51781 aaaacgtaga tatcatttag actgttattt tcaattttat caataaataa cacatagcca
    51841 ccggcagaca taaattgtcc ggccgaaaga gccgcaaaac gtgggttggc tttcgcttcc
    51901 gctaacattt cactctgttt attaattgcc caaggcgtaa gccaaaacac gttataaacc
    51961 gctaatgcag tggtaaaaat cgagagaaac atcgccactt taaccaatag cccttgcccg
    52021 ataccacaag cccgcattac ggtaatttca ctttcggcat aaaaccgccc gagggttaat
    52081 aacaaggcga taaacagtga gagtggcagc attaattgtg ccattgtcgg catacctaag
    52141 cctaataagc tcaccactaa atctgccggt actttaccac tcacagcaga acttagaaca
    52201 cgcactaatt gctgacaaaa aaagatcagt aataagataa acaatatcgc caattggctt
    52261 ttaaatatct ctttggttaa atatcggctt aagatcacgt tttttctcta taacatttac
    52321 aaatctgaat accgctaaac acaagcggtc tatttttgtt aattttttgc aaagagcgca
    52381 aaataactta ttcgaatcgc taataatacc tttttcatac aaaaaaatca cctatagaaa
    52441 atatcacgca cggcaaaacc gtgcgtaagt attattgttt tttcgatttt ttcgatgatg
    52501 ttgctttatg agcttcaaga attaatttct taccttggct atcttcaatt tcaatcttag
    52561 gtggtgcttc cgtattttga tgaaggatag ctataatatt ttcaccttgt gcaatatctt
    52621 caaagtttcc tttcacacgt aacttagccg catcaacact agtgtcaaat actaagaatg
    52681 tacctaatgc ggtaactcta atatttttaa gccctatatt gtccttcgtt accgttttat
    52741 attgaggtgc ttttttccct tttgcagcca taatcttctc ttgattagtc gcaatattaa
    52801 gaatattttg aactttagtc gcttctgctg tagattgtgc ctgttctgtt aaatttggtt
    52861 ctccatcaaa aataacatcc ccaacaaatt gcacctcttt aggctcattt tgcaataatg
    52921 gtgcaacgtc tttagctgaa acaaccaaaa ataaccgttc acctattttt tcaaaacgga
    52981 catcaatatt ggttaattgt gattcaattt gttcattaat tgtcttgatc gcagtttctg
    53041 tctcattttg aagcgatatt ttacgtgtaa tatcaacatc ataagcaata aaaccaactt
    53101 ttaaacgttg tgataactgc tgaagtaaat tgcccacatt tccatcataa gaaagacgta
    53161 actttg
//
LOCUS       DANLXO010000004        53163 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.004, whole genome shotgun sequence.
ACCESSION   DANLXO010000004 DANLXO010000000
VERSION     DANLXO010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 53163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 53163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..53163
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.004"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..9550)
                     /locus_tag="PXD69_000168"
     CDS             complement(<1..9550)
                     /locus_tag="PXD69_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDL6282414.1"
                     /translation="MNKHCFRTIFSKTLQRIVVVSELAKLAGKSESESMTSGAILQKI
                     CKIRPLAFSLFCALGFVTLSDNAMAETLIIQADSTAPKNQQPIILQTANGLPQINIQT
                     PNDKGLSHNKYSQFDVAEKGAILNNSRTNTATQQAGMVQGNPYLARGEAKVILNEVNS
                     SKPSVMKGYVEVAGKKAEVIIANPSGLHCDGCGIINADRATLTTGKPQINQGNLEGFV
                     VEKGKVTVAGKGLDNSRVDYTDILAREAKINAGVWSKKETKVITGKNTVKRSNSDNNL
                     QIIHTNQPLAGEEKPTVAIDVGELGGMYAGKIHLIGTEQGVGVRNAGHIGASADTLTI
                     DSQGRIVNSGTFNAQRQVQLNAQHGIDNQGKIENKQGNIQLNSKADIQNSGSIVARGG
                     NIQKKAETKIQQSGETVAKGNITYTARQIHADKNSLIAAGVDVTDTAQGEVRKLEAQS
                     VAGKTIQLTAPEKTTVQGKNIASGKINVAAAEIDANQSQNNAHTVEYSAKSGDIQANS
                     AQFSANQIKLTTPKWLSTEGSQLTAEVIEAQQANLNARGSVWKQTGEQDFRLKAESIH
                     TDSARFSVGGHFEIDGNRLTNNQGLLSSGKRLGLNLNDAVDSVDGKLVAKGELSIRAP
                     LLNNQQGLILSGEKQAITVNTLKNQSGVITSQTEQTLDITSELQNQGGRISASGVAIN
                     AQSLDNREQGEISSVKELALTVSQQVDNRHGVIQSVGNLTLNSTLLDNQGGVLKSATD
                     ITLNVPTVLNNRISENGSLIEAGGSLTMNSFEVENQGTLARQPQPIQGIIASQFVLNS
                     TKQLNNEKGGIYIGSSARFTLSDSLNNRNGEILSWGDLAIFGGKSLTMTNTEGKVSAN
                     NGLEITAKALSGDGDVQAGDIRLNLQENFDITKDINANRSMIIQTEGDILNRKKLAAN
                     DRLQLTANQITNAQNARISSADTRLTATSTVYNEGLINSRSDNDNAQTVIKAQEIHNI
                     GTGNIYGDKVALGAERILNQDKDGTSATIAARQSLGLAAKVIENNTLVYEANKKSGSL
                     IYSGGEIAIGRQLNEQDTVIGNAGQLHNRSSIIEAEGRIQLNADKVANVNSHYRSELE
                     TTDRQTVNEHFILPRDKHNRGGSDVYDNGHLPTINVNQLRKGYYRKTWSYWQKYDEAN
                     LPVITDISQLNATTVLAKPYAQSCANDESVDCTLLPAGNYKKDNPVWTWFNLTPPAED
                     APEMTPEIIQAMNEEDLANQHLSEAEQEKLQKEQGQGIAPVVPARPIEPVRGSTETEA
                     QYQKRLQTYQAELKAYEAAEAAYQRYVLLKPLIDWEAKYGANIQALDEAIAKHNKANL
                     SQEYPHFWNLWIKERMVKENITKASLPAQILAGGDLTYQSDEFINDKSWVIAGKALNP
                     IGRSRIANLDDADAVRQDWELGRRQFSFTEYHGGTRRRHSRYDENDGPLARLKEVHKD
                     MNIFVELENTSPTAYTDYVDAKAANAVKPEGNQVERGNLPDAPNPPTMAIERIPSPNA
                     AAFEVRSMTVDTRLPNQGLYRINPQADSHVLIETDPDFTDKKRWLSSDYMFNALRHDH
                     NNVHKRLGDGFYEQRLIREQINRLTGRQFLGDYTDFDSQYKALMDAGITFAQKFNLRL
                     GITLSPEQVASLTSDIVWFETQTVRLPSGETVSVLVPKVYVLARKGDIDGKGSLISAD
                     ALTINSKEIVNQGTIAGRRLAQFNAERLENSGTLSGGVLAAKVSGDLENIGGKIEADK
                     AILLDIAGNFNHTSTTRTTQIDLDGFKRAETNLDRKALLHVKDENGLLQVQAGNITSA
                     GADIINDGQGQTYLSAKNQLNLTALQVGFDEKMGGGNHYRNEALNDVVISRVQGKGDV
                     VVSGKNLYSEGADLDAKARLALLAENDMVLGSATRSRDYEEYHKTKSGGALAKKTKTT
                     YDNISETEHKGTELTGEDILVKAGHDIQGESLLAVSRSGDIDIIGGNNVTLSSATNQL
                     SEQHIRETKRSGFLNGGEIGFTIGSQKTRQENSLEGAIQSTARNTLGSEGGNIRIQAG
                     NKASVSNVDVLISNEKTAVISGKNGVRVESGKDVINSTDNYEFSQSGLSIALSTPVTD
                     AVQSARQSVQKAKATQNEKLKGVYAVKAAEDAVIAAQNAQKVAETLGNLGNALTENHA
                     AAENPAVKISVSLGTQKQQRESRSQSVTHSKSTLNGGNIALISGAGKVALEGVDTRVK
                     DTLLLDGKLGIESKGVADTYQNNTKNKNHSASVGVFIGLDRDSFGIGFEAGVSGGKGK
                     ENIETETWQNNQLQAGKIVTNSANGKLMLDATNVKANHWEGEVQDFEARSRQDISKYK
                     SEYTEGSVHGTLAVGTTGVNGHVAYNGAKLNTAQVENQTAIDIGKSGMDVKVKKNAHF
                     EGAVMTSQAEKENNRFQAGTLTTGDIENHSELKTRSVAISGGTSGVNPMSALSLLGNK
                     NESERSTTKAAIGENIAITLTEDLNAETTLNHLNRDTQNANQKVTKYDISEVKETQEL
                     VKGIGEIAEKAYQIYTHSEREKVTEAKLELGKAQAQKASKEEIGKLEANLDRLQKEFD
                     KNYGTGSKTKRAVEAVTAALQGLAAKDVGQAAVGLASPYLNAEIKKYTEGDTQANLIA
                     HALLGAVEAAATGNNVLAGAAAGAGSEAAADFIVKTLYKGKSTQDLTEAEKQNVALLS
                     QLASGLASGLIGDSTQSAAVGADIGKRAVENNYLSNWQEQKRSQELKSCHGDARCENQ
                     VRLYWGLVDIGQDVSFVSGAVAGVPENLAESVEGLISMFSSPIETIVAMKELIAREDT
                     LSYIANMTKQEYLAKLDKMQVYYEQAGAVGSFNAGKEFGNMMTDVVTALTGAGALVKT
                     GVGTTAKIVTKSGKELAIPKTRSSASLGTCSFHGDMEVKTDKGYRQISSIKVGDKVLA
                     KNERTGITTYQKVQAHYSNPYDYTVYVEVADSKGKYHTIVSNKIHPFFTQVLSGRVPI
                     SSEGHSYNGEIAKAQWVDAQHLQKGYRLLAESGEWQTVTKVKIKQERLKAYNMTVEKD
                     HTYFIRGTNADNEGVWVHNDCWHALPNDAKQVKNIDGYKAYQFTDPKDGKVVTVVQKD
                     LNRFETPNHQAGVDPHFNRLSQQIDAETGRYLSTDNPVDGLYNRAYLRSETLQKIYAN
                     YEKLPNGNYRNKLTRQEIEQPIDIGHMYGWEHRRLSLAAKELNWSQKQFNDYVNARPE
                     NFRLENM"
     gene            complement(9602..11377)
                     /locus_tag="PXD69_000169"
     CDS             complement(9602..11377)
                     /locus_tag="PXD69_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL6282415.1"
                     /translation="MKTPQNLILSTVLLSASFVAEANSSSLVQQARIDATQQQIDAAQ
                     QHRQQQYQQNQAEKFQPKADVRLETQINDTLTLSNHELPCYPIHQITLIDYSPDNSLT
                     TSQFQWAFEKAVKSFHLTLPHCFGGEGLAVLMKQIQNEIIGKGYVTTRVVTAEQDLRG
                     GKLVLTVIPGKIRNTLVVDSGKVPRFTKLHALTGFTFAEGDILNVRDIEQSLENLKRV
                     PTAEANIEILPSSSEKAEVGDSDLKISYSQAFPFRLNLGLDDAGSKSTGKLQTSATLS
                     IDNIFSANDLFYTSFTHSMKQKGDDNGRRASKNLTLYYSVPFGYWQLAFSHTHHRYHQ
                     EVFGAFDKSYLYAGESDTDKLTFSYLLYRDAKRKTSLSGSLWPRQSQNYIDGSEIEVQ
                     KRRMAGWEAGFSHKEYFPTATLELSANFKRGTAARGALSAPEEDYGEGTSRPKIITAS
                     ASLTKPFFWGKQPWQWQSSLNAQWNKTPLVPQDRFSIGGRYTIRGFDGELTLSGERGW
                     NWRNELSWQFNPNHAFYWAVDGGRVSGWATENQLGHHLMGTAIGFRGGVKGFSYDVFA
                     GRPMRKPEGFKTSDTVAGFNIGYNF"
     gene            11532..12617
                     /gene="queA"
                     /locus_tag="PXD69_000170"
     CDS             11532..12617
                     /gene="queA"
                     /locus_tag="PXD69_000170"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDL6282416.1"
                     /translation="MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETGEFADQQFV
                     DLYDHINEGDLLIFNNTRVIPARLYGRKPSGGKVEALVERVLDEHRCLAHVKASKAPK
                     EGAELIFGEDKLGEGKGFTATMVARHDTLFELVFNEEQPLFELLQQAGHMPLPPYIDR
                     PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQ
                     PVRVETIEDHKMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKD
                     GKLIAPFFSDTAIFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHA
                     VETKYRFFSYGDAMFINKNPNALSDVP"
     gene            complement(12644..13182)
                     /locus_tag="PXD69_000171"
                     /pseudo
     CDS             complement(12644..13182)
                     /locus_tag="PXD69_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13195..15477)
                     /locus_tag="PXD69_000172"
     CDS             complement(13195..15477)
                     /locus_tag="PXD69_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDL6282417.1"
                     /translation="MTLDRFCIALILFHLPILWLPKAFLFVGIVIGTLVLILSVYLRS
                     KLTAVLGLLVCIGYIQIIQVAKNAEKTTASKTPVQFEISKILKQTDYQTAIATLNTGE
                     KIYLNWQSKQPLLLNQFYQAELALRPISARSNIGNFDRQRWYFANHINMTATVRKVET
                     LAKTDYSLRTNWLNKVKAETDALPTQGFLLALAFGERAWLKTEHWGQFQQTATAHLIA
                     ISGLHIGLAMLFGVYFAKGVQWLCLKSELTALQAVGFSLYFARIVSFITAFGYSYLAG
                     FAVPTARALLAIAFVLLCQVLRRHYTPWQYWGRIVALLILIDPLSLLSDSFWLSILAV
                     ASLILWYQYFPLSRFLNDEYRKKITKFNRLWLSLLHLQIGIWLIFSPVQLYFFEGISA
                     FALLANLIIVPLYSFLLVPLILFTLLTDNLFSTWLLADYLAQFSLWLLDPFSNAWFAL
                     SHWQQWQLLSLNLLVLVLLYCKLYRLSYKKWLSAVAVSLLFNLSFYLPKLFNQTQTEW
                     IMFDVGQGLAMAFIYQQNKAVIYDTGSSWQANDGSRNSMAKMEILPYLKRNGIEVEAI
                     FLSHDDNDHSGGVVELLQAYPKARLISSSKVTYHNINPEPCIAGTSWQFGEWQLLAIY
                     PSHIAERAKNQDSCVILAKNDRLKILLTGDSGVEQERQFAHQLGKIDFLQVGHHGSKS
                     STGETLLSITQPAFAVISAGRWNPWKLPNKQIIERLNRRHINVLNTVETGMIRVKFYP
                     SSIEIEQARGAFSPWYKQFY"
     gene            complement(15619..16833)
                     /gene="sstT"
                     /locus_tag="PXD69_000173"
     CDS             complement(15619..16833)
                     /gene="sstT"
                     /locus_tag="PXD69_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDL6282418.1"
                     /translation="MSQSLSSKILGGNLVLRIAIGLVLGVLLAFINKEWATSVGVLGQ
                     FFVKSLRAIAPILVFVLVLAAIANKEVGSDSKLKPILVLYVLGTFFAALTAVVLSFMF
                     PTTLELTASPDGLTPPQGIGEILKTVIFNLVDNPLVALSNANFIGILAWSIGLGIAFR
                     HGSASSKAFLNDLANAVSFVVKVVIAFAPIGVFGLVAETVAINGIDAFEDYARLLVVL
                     VGAMLFVALVLNPLLVYWKIRRNPYPLTFTCLRESGVTAFFTRSSAANIPVNMNLAKR
                     LGVRDEIASVAIPLGASINMAGAAITVTVLTLAAAYTQGIQPDFATALLLSVVASICA
                     CGASGVAGGSLLLIPLACSLFNIPNDIAAQVIGVGFVIGVIQDSVETALNSSTDVLFT
                     AAVSYAEDQKSA"
     gene            17088..17450
                     /locus_tag="PXD69_000174"
     CDS             17088..17450
                     /locus_tag="PXD69_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDL6282419.1"
                     /translation="MKPTNKADFQRVINAAGYSMKGLKAAYINEAAFRQEIWCATILF
                     PLGLILGETNIEKALLVGTVLLVLVTELLNSAVESVVDRIGADFHELSGRAKDIGSAA
                     VFMAMVLLAITWILILFC"
     gene            17487..19130
                     /locus_tag="PXD69_000175"
     CDS             17487..19130
                     /locus_tag="PXD69_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HDL6282420.1"
                     /translation="MRLKKTLLSVALLSATSAMAYETGKTYRFTVLHTNDIHGHFWQS
                     DKGEYGLAAQKTLVDNIRKEVAEKGGSVLMLNAGDANTGVPESDMQNARPDIEGMNAI
                     GYDAMVLGNHEFDYPLQILSMQEKWAKFPFISANVINKKTDKPIVKPYVMLERGGLKI
                     AVIGLTTEDTAKLGNPDVTENAFFKNPIETAKNTLAEINQKEKPDVRIALTHMGYYFD
                     GKHGTNAPGDVTMARTLEKGAFDLIIGGHTHDTVCIDEKGQFKAKYTPGEECKPDFQN
                     GTWIVQAGEWGKFVGRADFEFKDGKATLVKYELIPVNLKKTIKKEDGTKEYRLYQPEI
                     KADEATYTLLKKYQDEGDKKLNIEVGRVKGLLDGKREHIRFQQTNLGRLIAQSQMERV
                     KADIGIMNSGGIRTSLEEGVITYKHILTVQPFGNMIATVDLKGQELLDTLTTIALKEV
                     DTGAYPQFAGISMVVDRTAKTISDVKIGGKPFDKEKTYKVSLPDYVAAGGDGYPLLKK
                     HPSYVNTGFIDAEMLKKFFEENKIIEADKYDPKNQIIFK"
     gene            complement(19337..20206)
                     /locus_tag="PXD69_000176"
     CDS             complement(19337..20206)
                     /locus_tag="PXD69_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL6282421.1"
                     /translation="MSSRGKILNTISSLQNSLTKTEKKIAAAILSQPELLSQCSLSEV
                     AKQLDVGEATFIRFCRTLGFKGYTDFKLELAIELATQNQDNRVLLDTDVSESDTSKDI
                     AEKLKVSLDNVIEETINLLDFNVLEKVVEELRKAKRIFLFGVGSSGLTAEDAKHKLMR
                     IGLQTDAVTNNHFMYMQAALVKEGDLVIGISHSGYSEEIVKSLRFSRANKATTVAITH
                     NLRSPVTEEANYVLINGNRQGHMQGDSIGTKMSQLFVLDLIYTLLVKAEPENALKQKQ
                     KTLNVILEQRVKG"
     gene            complement(20216..20680)
                     /locus_tag="PXD69_000177"
     CDS             complement(20216..20680)
                     /locus_tag="PXD69_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL6282422.1"
                     /translation="MILADLSRDDYLKSLPPVFARLCKKLKSLDLVNLELGWQELENG
                     IRMNVMSFETTPAEGKKAELHRKFIDIQLLIDGEEMIEYGLSQPDLSKYDEYRDEDDY
                     QLTAEIDDKNNLILKPNMFAIFLPYEPHKPGNSVNGNKTLKKLVVKVPVELI"
     gene            complement(20927..22429)
                     /gene="ppx"
                     /locus_tag="PXD69_000178"
     CDS             complement(20927..22429)
                     /gene="ppx"
                     /locus_tag="PXD69_000178"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDL6282423.1"
                     /translation="MSSNIAPREFAAIDLGSNSFHMIVARIVNGSIQVLSRLKRRVRL
                     ADGLDENLVLSQDAIDRGIACLALFAKRLEGFSAENVKVVGTYTLRRAINNQAFLEQA
                     KAVFPYPISIISGQQEARLIYSGVSHTQPETGRKLVVDIGGGSTEMTIGDDFTPIRAE
                     SRHMGCVSFAKRFFPQGELTIERFDSAYQLAMEKIEDLMWEYKELGWDYALGSSGTIK
                     TVHQVLIANGYRDGLITESRLQKIIDICLEFKSLNEIKLRGLLDERADVLVPGLAILL
                     ALFHTFRIDVLRYSNGALREGVMYGLEKSFQVGDIRQRTAEALAEQFALDKQQAKRVE
                     HTALILFDQIKTWKNRRQVQDLRSMLKWASLLHEIGIVVNHNNVHRHSAYLIANRDLP
                     GFDFEQQTLLSVLMRYHLKGFKRSDIRSINRYQCRDVLTLVRVFRLAVLLNRSRQATV
                     VPKQLNLVIENNAWQLTFEQGFLANNPLISIDLEEEQKILASTNLQFAVS"
     gene            22625..22954
                     /locus_tag="PXD69_000179"
     CDS             22625..22954
                     /locus_tag="PXD69_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HDL6282424.1"
                     /translation="MSEVNKSFHDMLEYVHLYRLKNKLHRETADNDRKIRDNQKRVLL
                     LDNLTQYITDEMSIEEVRAIISNMRDDYENRVDDYMIRNAELSKQRREIRQKMASHKQ
                     APTNKKA"
     gene            complement(23018..24448)
                     /locus_tag="PXD69_000180"
     CDS             complement(23018..24448)
                     /locus_tag="PXD69_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HDL6282425.1"
                     /translation="MSTLTYLQKIGRALMVPVAALPAAALLMGIGYWIDPDGWGTNSQ
                     LAALLIKSGAAIIDNMSILFAVGVAFGMSKEKDGAAALSGLVGYLVITTLLSPGTVAQ
                     LKGIAVDQVPAAFGKINNQFIGILVGVISAEIYNRFYQVELPKALSFFSGKRLVPIVV
                     SFILLYVWPVIFGALVSFGESIKDMGALGAGIYAFFNRLLIPVGLHHALNSVFWFDVA
                     GINDIPNFLGGAKSLAEGKAVIGVTGMYQAGFFPMMMFGLPAAALAIYHSAKPAKKMQ
                     VASIMFAAALASFFTGITEPLEFAFMFVAPVLYVVHALLTGLSVYIAASMEWIAGFGF
                     SAGLVDLVLSTRNPLAVQWYMLLAQGIVFAVIYYVLFRVVIQAFNLKTPGREEDSEVQ
                     TVNTVSRSEQAAKFVEALGGKENITSIDACITRLRLTLNDTAKADETKLKALGSKGNI
                     KLGENGYQVILGPEAEFVADAMKKLN"
     gene            25011..26363
                     /gene="lysC"
                     /locus_tag="PXD69_000181"
     CDS             25011..26363
                     /gene="lysC"
                     /locus_tag="PXD69_000181"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HDL6282426.1"
                     /translation="MSHLSVAKFGGTSVANFDAMTSSANIVIADANTRVVVLSASAGV
                     TNYLVELANGCEKEHRDEVIAAVRQIQYNIIEKLQHQDAVKAEIDELLERIETLAESA
                     SLATSAALSDELISHGEMMSTKIFTQLLIERGHPAVWVDVRDVVATNSHYGKAAPNDE
                     KTQQQSDNVIKPLIASGKIVITQGFIGRDDEGKTTTLGRGGSDYSAALLAEVLNANDV
                     LIWTDVPGIYTTDPRVVPNAQRIDTMAFNEAAEMATFGAKVLHPATLLPAVRSNIPVY
                     VGSSKAPEQGGTWVTRDPQPRPTFRAIALRRNQILLTLSSLSMLHAQGFLANVFAILA
                     KHKISVDVITTSEVSVALTLDKTGSASSGADMLSAELLDELNAYCNVQVESDLALVAI
                     IGNNLHAQSGVAKKLFHTLENYNIRLISYGASSNNVCTLVKNAEADDVVRSLHKGLFE
                     "
     gene            complement(26434..28680)
                     /gene="parC"
                     /locus_tag="PXD69_000182"
     CDS             complement(26434..28680)
                     /gene="parC"
                     /locus_tag="PXD69_000182"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDL6282427.1"
                     /translation="MTTEINYEGIEQMPIKRFTEDAYLNYSMYVIMDRALPFIGDGLK
                     PVQRRIIYAMSELGLNASAKYKKSARTVGDVLGKFHPHGDSACYKAMVLMAQPFSYRY
                     PLVDGQGNWGAPDDPKSFAAMRYTESKLSKIAEILLGELGQGTVDYQPNFDGSLEEPK
                     YLPARLPHILLNGTMGIAVGMATDIPPHNINELADASVMLLDNPKATLDDVLSVVQGP
                     DYPTEAEIITPKAEIARMYEQGRGSIKMRAVWKKEEGEIVISALPHQASPSKIIEQVA
                     TQMRNKKLPMVDDIRDESDHENPIRIVIVPRSNRIDFDALMDHLFATTDLEKSYRVNM
                     NMIGLDGKPAVKNLLTILNEWLSFRRTTVTRRLNYRLDKILNRLHILDGLMIAFLNID
                     EVIEIIRNEDEPKAELMARFNLTDVQAEAILNLRLRHLAKLEEHQLQAEKSELEKERD
                     ELQLILGSERRLNSLIKKEIQADAKAFASPRRSPLVERAESKAIAESDLTPTEDVTVI
                     LSEKGWVRCAKGHDIDVQALSHRAGDGYLAHARGRSNQPVVFLDSTGRAYALDPTSLP
                     SARSQGEPLTGKITLPEGAVVQQVLMASPETKVLMASDSGYGFICTFADLVSRNKAGK
                     AVISLTENAKVLPPQLLENDENLSLVAMSNVGRMLVFPVSELPQLSKGKGNKIINISA
                     AAAKSGDEYLARLLVIKPTNSLVFVSGKRKITLKPSDVDNYRGERARKGSQLVRGLST
                     NSTVEIVE"
     gene            28865..29902
                     /gene="pstS"
                     /locus_tag="PXD69_000183"
     CDS             28865..29902
                     /gene="pstS"
                     /locus_tag="PXD69_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005756281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDL6282428.1"
                     /translation="MAKRFKLLTVLGISFSLSVAANAQTITGAGASFPYPIYAKWAGL
                     YEKETGNKINYQSIGSGGGQQQIIAKTIDFGASDDPMKGETLAEHKLLQFPAIIGGTV
                     PVVNIPELKSGELKLSGKVLADIFLGKITQWNDPAIVALNQDIALPAKTILVVRRSDG
                     SGTTFGWTNYLSKVSAEWKEKVGEGKSVKWPVGQGGKGNEGVAAYVKQLKYSIGYVEY
                     AYAKQNALAWVSMQNADGKFVQPSRETFAAAAANADWSQTAGMGVILTNEAGEKAWPI
                     TAASFILIHQHSDKPEQTKGVFKFFDWAFKHGKDAAAELDYVPLPDNVVEKIQTQWKT
                     EVKDGQGNSLY"
     gene            29983..30942
                     /gene="pstC"
                     /locus_tag="PXD69_000184"
     CDS             29983..30942
                     /gene="pstC"
                     /locus_tag="PXD69_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDL6282429.1"
                     /translation="MHKHKIDNKCLNHPWVEGLFHHTTRFFALLVFALLVVVLVSLLL
                     GSWEALSRFGVSFLWENEWNPVNDRYGALVPIIGTLISAGIALVIAVPVSFGIATFLT
                     ELAPQWLKRPVGTAVEMLAAIPSIIYGMWGLFVFVPLFQEYVQPYLIDTFGQLPFIGM
                     LFSGAPFGIGLFSAGLVLAIMIIPFIASIMRDVFSVVPPLLKESAYGLGSTTWEVIWK
                     VVLPYTKTGVIGAIMLGLGRALGETMAVTFVIGNAFMLPDSVFSPSTSIASAIANEFN
                     EAGGLQKSALMSLGLILFLITSIVLAASRLLIARMGKQEGKRE"
     gene            30939..31787
                     /gene="pstA"
                     /locus_tag="PXD69_000185"
     CDS             30939..31787
                     /gene="pstA"
                     /locus_tag="PXD69_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005650601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDL6282430.1"
                     /translation="MKNYQNRRFYCRKIKNVLMLSLAYSAVLFGLFWLVWIIVTLLQK
                     GIPALSWELFTRPTPAPNETGGLRNAIVGSILIVSTATLIATPIGILAGTYLSEYGRY
                     TKLAKFTRFLNDVLLSAPSIIIGLFIYAIYVAQVKHYSGWAGSLALAVLVIPIVVRTT
                     DSMLNLVPNNLREAAAALGCPRWRVITMISYRAARSGIITGVLLAVARISGETAPLLF
                     TALSNQFASLDMNAPMANLPVVIYQYAASPFADWNTLAWAGAMLITLFVLSLNIITRL
                     YFSKTK"
     gene            31797..32567
                     /gene="pstB"
                     /locus_tag="PXD69_000186"
     CDS             31797..32567
                     /gene="pstB"
                     /locus_tag="PXD69_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HDL6282431.1"
                     /translation="MLPTDLETKLHINNLNFYYGDFHALKNINMRIAKNKVTAFIGPS
                     GCGKSTLLRTLNRMFELYPNQRATGEINLDGENLLTSDTDISIIRAKVGMVFQKPTPF
                     PMSIYDNVAFGIRLFEKLPKSELNDRVEWALTKAALWNEVKHKLNQNGDSLSGGQQQR
                     LCIARGIAVKPEVLLLDEPCSALDPISTMKIEELINELKHDYTVAIVTHNMQQAARCS
                     DYTAYMYLGELIEFGDTKQIFDKPKFRQTEDYIKGKMG"
     gene            32651..33337
                     /gene="phoB"
                     /locus_tag="PXD69_000187"
     CDS             32651..33337
                     /gene="phoB"
                     /locus_tag="PXD69_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HDL6282432.1"
                     /translation="MNNKILIVEDERAIREMLSLYLSKQYQVIEAEDYQSAINKLGEK
                     PELILLDWMMPGRSGIHLIKYLKKQPETEKIPIIMLTARSSEEDCITGLNAGADDYIT
                     KPFSPQVLLARIEAVWRRSYDPPSNLINIDGLILDQQAQRVLVAEQEVKLSGTEYKLL
                     HFLMTHPEKVYRREQLLDFIWGNDIYVEDRTVDSYIRRLRKSLEPYGFERYIQTVRGS
                     GYRFSNHFQD"
     gene            33340..34620
                     /gene="phoR"
                     /locus_tag="PXD69_000188"
     CDS             33340..34620
                     /gene="phoR"
                     /locus_tag="PXD69_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HDL6282433.1"
                     /translation="MKVKLSLKHFLLELLLAAAVAGVFNLFFPAYFFWFSFCLLVLLI
                     WHHHTESSLLQLLRPNEQSGRSKVTTMEHLSQSAAFYHERLRQDKIKTLRLLSKLNKH
                     IQYLPDAIIICQENGEISWCNNVAQELFEFYWDKKSNKSIFNVIFYPEFKSYFRQQRH
                     HRPLVLLTHNKRYIELNLNRYDSNSRLIVARDVTSFVRLMHSRQTFLANMNHELRTPL
                     TILQGYLEMLENEPHNMALQQKALNAMKEQSQRMTNLLRQLSLLVKIEHSNDSEHNEV
                     QMSALISAIQKNTEILSQNQQILFDIEPNLTVWGDQEQLQSAVSNLIYNAIRHAGEGV
                     TIQICCQRDNQEPNTAIFSVQDDGIGIDAHHITHLTERFYRVDESRSNKTGGSGLGLA
                     IVKHALEQHHSTLEIESEAGKGSRFSFKLPLIKK"
     gene            34882..37032
                     /gene="pnp"
                     /locus_tag="PXD69_000189"
     CDS             34882..37032
                     /gene="pnp"
                     /locus_tag="PXD69_000189"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDL6282434.1"
                     /translation="MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVV
                     AKKDVKEGQDFFPLTVDYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLF
                     PEGFFNEIQVIATVVSVNPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQF
                     VLNPTTSEQKISRLDLVVSGTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENI
                     KEFVKEAGKPRWDWVAPEPNTDLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAEV
                     IAQLTAEDETVSEGTIIDIITALESQIVRSRIIAGEPRIDGRTVDTVRALDICTSVLP
                     RTHGSALFTRGETQALAVATLGTERDAQIIDELTGEKSDRFLFHYNFPPYSVGETGRI
                     GSPKRREIGHGRLAKRGVLAVMPTAEEFPYVVRVVSEITESNGSSSMASVCGASLALM
                     DAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGTRTGVTALQMDI
                     KIEGITPEIMRIALNQAKGARMHILGVMEQAIPAPRADISDYAPRIHTMKIDPKKIKD
                     VIGKGGATIRALTEETNTSIDIDDDGTVKIAATDGNAAKAVMARIEEIVAEVEVNQIY
                     NGKVTRVVDFGAFVSILGGKEGLVHISQITNERVERVADYLTVGQEVQVKVVEIDRQG
                     RIRLTMKDINNTNEANAEETVAENVVETEQENNF"
     gene            37113..38036
                     /gene="nlpI"
                     /locus_tag="PXD69_000190"
     CDS             37113..38036
                     /gene="nlpI"
                     /locus_tag="PXD69_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HDL6282435.1"
                     /translation="MVQLFKLFRIRFLLLNLISVLMLSGCTSRYADLVSIKNLALAEL
                     NPQLRFEQEAMVVRLSQVLEEAPLTPSEQADLYFERGVIYDSLGLWSLARYDFAQAIS
                     LNQRMAAAYNYMGLYLLLEGDYDSSIDAFNAVLELDREYSYTYLNRGLAFYYSGRYSE
                     AQRDLLHFYEEDKKDPYRALWLYFNELEFTPTEAKNNLQKRANNLSSDYWGTNIVNYF
                     LGKLNLAQVRAIMERDAKENSSQYAEILTETYFYLAKQQLKLDHKDEAISLFRLALAN
                     QVFNFVEYRFALFELSQIRGMTQTTPVVDKE"
     gene            38238..40046
                     /locus_tag="PXD69_000191"
     CDS             38238..40046
                     /locus_tag="PXD69_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDL6282436.1"
                     /translation="MTTESLTFADLGLPQPILDAVNEMGFVNPSPIQQECIPHLLAGR
                     DVLGMAQTGSGKTAAFSLPLLAQIDPTQRHPQMLVMAPTRELAIQVADACEQFAKNMK
                     GIRVVTVYGGQRYDIQLRALKQGSQVVVGTPGRILDHIRRGTLDLSELKFIVLDEADE
                     MLRMGFIDDVETVMAELPETHQTALFSATMPEPIRRITRRFMKDPQEVKIKATERSAP
                     DIEQSYWLVNGFRKNDALLRFLEVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALN
                     GDMTQQAREQTLDKLRSGRLDILVATDVAARGIDIERISLVINYDIPLEEESYVHRIG
                     RTGRAGRSGRALLFVEPRERRLLRNIENLIKKPINEVAIPNHEILMEKRREKFKARIS
                     KQLEHHDLEKYRELLEDLFTADQDHEELAAAMMMLLQEKQKLILPPDPVVRAARSERG
                     RDRNERNDRRNGREHRENNGVAMDLYRIELGREDGVEVRHIVGAIANEGDISSRYIGH
                     IKLYDKYSTIELPQGMPNHLVQHFAHKARVLSKPMQMTLLGSANSASNANPFEGRGRR
                     GNDRNDRGGRRDGGFNKDRKGGFKEKRFSEKRGRRD"
     gene            40128..40652
                     /gene="tadA"
                     /locus_tag="PXD69_000192"
     CDS             40128..40652
                     /gene="tadA"
                     /locus_tag="PXD69_000192"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HDL6282437.1"
                     /translation="MFIKPNQTSCPLQISEQDIAFMQYALDLADLAEAKGEIPVGAVL
                     VDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQTLGNYRLLDCTLYVTLEPCPMCA
                     GAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHFLEVHGNVLGRECSQKISDFF
                     KQRRLQKKGDALIK"
     gene            complement(40690..41770)
                     /locus_tag="PXD69_000193"
                     /pseudo
     CDS             complement(40690..41770)
                     /locus_tag="PXD69_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252783.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
     gene            complement(41773..42696)
                     /gene="truB"
                     /locus_tag="PXD69_000194"
     CDS             complement(41773..42696)
                     /gene="truB"
                     /locus_tag="PXD69_000194"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDL6282438.1"
                     /translation="MSRPRKRGRDIHGVFLLDKPQGMSSNDILQKVKRIFQANKAGHT
                     GALDPLATGMLPICLGEATKFSQFLLDSDKRYLVTAKLGERTDTSDAEGQVVETKAVA
                     VTKSQILAALEKFRGDILQVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELNF
                     IEYKAPFLTLEVHCSKGTYIRTLVDDLGEELGCGAHVTMLRRTAVADYPIEKMMSYAD
                     LQNLAENQPLAELDQHLLPMDTAVSALAKINLSSEQTKAVGFGQRIRFDNLNQLYGLV
                     RLYSEDEQFLGVAEITNDTVIRPNRMINLTE"
     gene            complement(42699..43079)
                     /gene="rbfA"
                     /locus_tag="PXD69_000195"
     CDS             complement(42699..43079)
                     /gene="rbfA"
                     /locus_tag="PXD69_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDL6282439.1"
                     /translation="MSREFKRSDRVAQELQKEVAVILQREVKDPRIGMVTVSDVEVSR
                     DLAYAKIFVTFLFDNDAEAIKQGMQGLEKASPYIRTLLGKAMRLRIVPELRFIYDESL
                     VEGMRMSNLVSSVIKNDEEKHKED"
     gene            complement(43164..45731)
                     /gene="infB"
                     /locus_tag="PXD69_000196"
     CDS             complement(43164..45731)
                     /gene="infB"
                     /locus_tag="PXD69_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDL6282440.1"
                     /translation="MLVQLSKEDNKMTEEKKTLSLGGARKASKVNTTTTSGKVKAVEV
                     KEKKPKIDAKALQEKAAKEAAAAKARAEKEAAEKLAKEKAEAEAKEKAAKKAAESTAS
                     KPISVPVMPSSKAKEEKPKAQQVQPKQEKAVDPEKEAKRKEEAELRRKQEELAQQKAE
                     MEAKRAAENARRLAEIAREEAEDNGNEDFDDERFTSSYAREAERDNDRRSEGNRGRNG
                     KGNVAKAKKGGREEDKNERSADRRNHKEVKGKGKQGKKGAALQQAFTKPAQVVKADVV
                     IGETITVAELANKMAVKATEIIKMMMKMGEMVTINQVIDQETAQLVAEELGHKVILRK
                     ENELEEAVLEDRDTHAEKVTRAPVVTIMGHVDHGKTSLLDYIRKAKVAAGEAGGITQH
                     IGAYHVETDDGKMITFLDTPGHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQ
                     HAKAAGAPLVVAVNKIDKPEANPDRVEQELLQHEVISEKFGGDVQFVPVSAKKGMGID
                     DLLEAIILQSEVLELTAVKDGMASGVVIESYLDKGRGPVATILVQSGTLNKGDIVLCG
                     FEYGRVRAMRDENGKDVESAGPSIPVEVLGLSGVPAAGDEATVVRDEKKAREVALYRQ
                     GKFREVKLARQQKAKLENMFSNMAAGDVAELNIIVKADVQGSVEAISQSLMELSTDEV
                     KVKIVGSGVGGITETDATLAAASNAIMVGFNVRADASARRVIENENIDLRYYSIIYEL
                     LNDVKAAMSGMLQPEFKQEIIGLAEVRDVFRHPKFGAIAGCMVTEGIVKRNNPIRVLR
                     DNVVIFEGELESLRRFKDDVSEVRNGMECGIGVKNYNDVKVGDQIEVFEVVEVKRTI"
     gene            complement(45716..47212)
                     /gene="nusA"
                     /locus_tag="PXD69_000197"
     CDS             complement(45716..47212)
                     /gene="nusA"
                     /locus_tag="PXD69_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDL6282441.1"
                     /translation="MSKEILLAAEAVSNEKQLPKEAIFEALETALTIATKKSRDLDID
                     VRVVVDRKTGDFQTFRRWAVVENVNNMTREISLEAAQFEDPNVQLGDFIEDEVESIEF
                     GRVAIQTFGQVVKTKIREAEKTKIIDEFRSDLGKIILATVKKVTRDNIFLELQGKSED
                     IKGEAVIVREDMIPRENFRPGDRVRGVLYEIKPESKGPQLFVTRAKPVMLEELFKLEV
                     PEIGEGVIEIKGSARDVGSRAKIAVKTHDKRIDPVGACVGMRGARVQAISNELGGERV
                     DIVLWDENPAQFVINAMAPADVSSIVINDETHSMDIAVEAKNLAQAIGRNGQNVRLAT
                     QLTGWALNVMTVEELTKKSEEEDGKVINLLTSALEIDEEFAQVLIEEGFTSLEAIAYV
                     PVDTLTAIDGLEDEDLVEELQSRAKNAITKKALEEEKLLKSAQIEEKLLTLEGMDRHI
                     AFKLAEKQITTLEELAEQGVDDLADIEELSEEKAGELIMAARQICWFN"
     gene            complement(47233..47694)
                     /gene="rimP"
                     /locus_tag="PXD69_000198"
     CDS             complement(47233..47694)
                     /gene="rimP"
                     /locus_tag="PXD69_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDL6282442.1"
                     /translation="MATLEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDKE
                     GGVTIDDCSDVSRQVSAIFDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVI
                     HLRIPMFDRRKWQGKIKQVEGDFITLTVENEDRQFAFGNIQKANLVPVFNF"
     gene            complement(47921..47997)
                     /locus_tag="PXD69_000199"
     tRNA            complement(47921..47997)
                     /locus_tag="PXD69_000199"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(47961..47963),aa:Met,seq:cat)
     gene            complement(48046..50208)
                     /locus_tag="PXD69_000200"
     CDS             complement(48046..50208)
                     /locus_tag="PXD69_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDL6282443.1"
                     /translation="MWKKTLIAVFLASQYAFAVGTGKEPSKSYTETELKQLKNDWLAI
                     YQKELQYAENLRLKQRENFQQINYLADAAISQKNLSLSTEQIIQRLLLTLAGYPLEMK
                     AEWKLLNAKITLKQATESEVKAFISKYPDSLYQRQLQNLMFELLYREQKFPELLEYAQ
                     NVKQSSLADQCRLFSARYELAASKAQINPEVSQVTEQKAENAELLALVQEFDRFWLAT
                     PKLTSDCANLESYWRDQGLKTDEKMRLKAVELIKQNANAELANLAANVNNENLKIWLS
                     SVEKVANNPADLQNFIENQPLDSPFYADNKAIIQQLFAKYVRTLSENMENPSFQQYQT
                     WAEKYQLSSEEINGWKNAFITRFFDNPEPTFQFWRDEQIKLLKTDNLTERRLRMAIWQ
                     KADLNEWLVLLSQQAKEKAEWRYWAAKEEKNEAKRKVDFESLAKERGFYAMLAAQQLG
                     IVYQIPMLEVPELTQAQLELYANQLARIQELRELGQFDQARKIWIDWIKNIKPEAGEN
                     TPTKIQLALIKYAKDKNWYDLAVEGTIQTKAFDYLDLRLPNAYSDWFDLHLQDKKISK
                     TFAQAIARQESAWNAQAQSHANARGLMQLLPTTAQKTAKDNGLTFKDGNDLFQPFNNI
                     MLGTTHLMELNEKYPNNRILIASAYNAGAGRVEQWLKRSNGQLAMDEFIASIPFYETR
                     GYVQNVLAYDYYYQMLYSDINDKNGLKMFYQEELTRKY"
     gene            complement(50311..50622)
                     /gene="yciH"
                     /locus_tag="PXD69_000201"
     CDS             complement(50311..50622)
                     /gene="yciH"
                     /locus_tag="PXD69_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HDL6282444.1"
                     /translation="MTLVYSTETGRIKSEVIKEERPKGDGIVRIQRQTSGRKGKGVCL
                     ITGLDLEDKALNSLASELKRKLGCGGSFKDGVIEIQGDNRGFIKQILEQKGFKVKLAG
                     G"
     gene            complement(50705..51397)
                     /gene="pyrF"
                     /locus_tag="PXD69_000202"
     CDS             complement(50705..51397)
                     /gene="pyrF"
                     /locus_tag="PXD69_000202"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDL6282445.1"
                     /translation="MNNKVIVALDYETEREALEFVDLVDPSLCRLKVGKEMFTTLGTN
                     FVKQLHERKFDVFLDLKYHDIPNTVARAVRSAADLGVWMVDLHASGGLAMMEEAKKIL
                     EPYGKEAPLLIAVTVLTSMEDLDLLQIGINASPMEQVIRLAHLAQRAGLDGVVCSPQE
                     VEVLRTHCGQDFKLVTPGIRPKGTDFGDQRRVMTPKQAVETGSDFLVIGRPITQAQDP
                     LAVLKSINQSIS"
     gene            complement(51421..52617)
                     /gene="lapB"
                     /locus_tag="PXD69_000203"
     CDS             complement(51421..52617)
                     /gene="lapB"
                     /locus_tag="PXD69_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HDL6282446.1"
                     /translation="MLELLFLLLPIAALYGWYMGQRSAKKDQETASNKFSREYVTGLN
                     FLLSNQQEKAVDLFLSMLQKQESENHIASESQFEAELTLGNLFRSRGEVDRALRIHQT
                     LVNSPHYSFDQKLLAKQQLAKDFMVAGFYDRAENYYISLVDEPEFAKYSLSQLAVIYQ
                     KTREWKKAINVTEKRLRIEPDADKIPLSHFYCEYAQGVKFDDKAAFIESLNKALEYYP
                     QSTRASIILGDFYLEEGEYLRALSYFEQILVQDPDYISEVLGRIKQSYMALEDLNGYE
                     LFLIRANRVKHNSSVDIALTEFIEEKDGINAAHSKLYQQLSTYPNLITFHRFIRYQAD
                     FAEEGNGKESLVLLHNMVGNQIKRSFQYRCLNCGYQSYRLMWQCPSCNQWEKIKPVQS
                     IEGIIQ"
     gene            complement(52621..52908)
                     /locus_tag="PXD69_000204"
     CDS             complement(52621..52908)
                     /locus_tag="PXD69_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HDL6282447.1"
                     /translation="MIKYILGILIVIAVIIVAVTIGANNDQLITFNYIFAQSELRLST
                     LVAILFGLGLILGWLVTGIFYLKIKFQNVALNRRVKRQAQQITELTTPKAE"
     gene            complement(52945..>53163)
                     /locus_tag="PXD69_000205"
     CDS             complement(52945..>53163)
                     /locus_tag="PXD69_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HDL6282448.1"
                     /translation="VEHCVKELLEQLTATLEEGERIEVRGFGSFSLHYRQPRLGRNPK
                     TGESVLLGAKYVPHFKAGKDLKERVDLL"
BASE COUNT        14910 a        11946 c        10305 g        16002 t
ORIGIN      
        1 acatattttc taatctgaaa ttctccggtc tcgcattaac ataatcatta aattgttttt
       61 gactccaatt taattctttt gccgctaatg ataatcggcg atgttcccag ccatacatat
      121 gacctatatc aataggctgt tcaatttctt gacgggttaa tttattgcga taattaccat
      181 ttggcaattt ttcataatta gcataaattt tctgtaacgt ttccgagcgt aaataagctc
      241 ggttatatag cccatctacc ggattatctg tcgataaata gcgtcccgtt tcggcatcaa
      301 tttgctgaga caaacggtta aaatgtggat ctaccccggc ttgatggttt ggcgtttcaa
      361 aacgattgag atctttttga actactgtca ccactttccc gtctttcggg tctgtgaact
      421 gataagcttt atagccatca atatttttta cctgtttggc atcattcggt aaagcgtgcc
      481 aacaatcatt atgcacccat accccttcat tatcggcatt tgtacctcta ataaagtaag
      541 tatgatcttt ctctaccgtc atattgtagg cttttaatct ttcctgtttg atttttacct
      601 tagtgacagt ctgccactca ccactttcag caagtaagcg atagcctttt tgcaaatgtt
      661 gagcatcaac ccactgagct tttgctatct ctccgttgta agaatgcccc tccgaagaaa
      721 tcggcactct gcccgataat acttgcgtaa agaacgggtg gattttgttt gacacaatgg
      781 tgtggtattt tcctttgctg tctgcgactt ctacatacac cgtataatcg tatggattac
      841 tgtaatgagc ttggactttc tgataggtgg ttataccggt gcgttcattt ttcgccagca
      901 ccttatcgcc cactttaatg ctggaaatct gtcgataacc tttatcagtt ttgacttcca
      961 tatcaccgtg gaatgagcaa gtgcctaaac tagcgctcga tctggtctta ggaatcgcaa
     1021 gttctttacc tgatttggtg actattttcg ccgttgtccc tacacctgtt ttaacaagag
     1081 caccagcacc ggttaatgct gtcaccacat cagtcatcat attgccaaac tcttttccgg
     1141 cattaaaaga acctacagcc cctgcctgtt catagtaaac ctgcatttta tcgagtttag
     1201 ctaaatactc ctgtttagtc atattagcaa tataggagag cgtatcttct cttgcgatca
     1261 attctttcat cgccacaata gtttctattg ggcttgagaa catggagatc aatccttcaa
     1321 cgctctcagc gagattctca ggaacaccag caacggcgcc tgatacaaaa ctaacatctt
     1381 gcccaatatc aactaatccc caatataatc gaacttggtt ttcacagcgg gcatcaccat
     1441 ggcaggattt taattcttgt gagcgtttct gctcctgcca gttcgagagg tagttattct
     1501 ccactgccct tttcccaata tccgccccaa ccgctgccga ttgtgtacta tcccctatca
     1561 aacctgaagc cagtccgctt gcaagctggc ttagcaacgc cacattctgt ttctcggctt
     1621 cggttaagtc ttgcgtggat ttgcccttgt agagggtttt aactataaag tccgctgccg
     1681 cttcgctccc tgcgcctgca gcagcccctg ccagtacatt gttccctgtc gcagccgctt
     1741 ccaccgcacc cagtaaggcg tgggcaatca ggttggcttg ggtatcccct tcggtgtact
     1801 ttttgatttc tgcatttaag tatggtgagg ctaaacccac tgccgcttgt cccacgtctt
     1861 tcgccgctaa accttgcaag gctgccgtca ccgcttccac cgctcgtttg gttttactgc
     1921 ccgtgccgta gtttttatca aactcttttt gcaagcggtc taaattggct tctaatttac
     1981 caatctcttc cttgctcgct ttttgagctt gtgctttgcc caattccagc ttcgcttccg
     2041 tcactttttc acgctcacta tgcgtgtaaa tctgataagc cttttctgca atctcgccta
     2101 tgcctttcac cagctcttgt gtttctttca cctcactgat atcgtatttc gtcacttttt
     2161 gattggcgtt ttgcgtatct cggttgagat gattaagcgt agtttccgca tttaggtctt
     2221 cggtgagggt gatagcgata ttttctccaa tcgctgcctt tgttgtgctt cgctcgcttt
     2281 cgtttttatt gcccagtaag ctcagtgccg acatcgggtt caccccactt gtccctccgc
     2341 taatcgcgac acttcgggtt ttcaattcac tgtggttttc aatatcgccg gtggtcagcg
     2401 tgccggcttg gaagcggttg ttttctttct ccgcttggct agtcattacc gctccctcaa
     2461 aatgggcgtt ctttttcact ttaacgtcca ttccactctt gcctatgtcg attgcagttt
     2521 ggttttccac ctgagcagtg ttcaacttcg ctccattata tgccacatga ccatttactc
     2581 ctgttgtccc taccgccaat gtgccatgta cgctgccttc tgtgtattcg cttttatatt
     2641 tgcttatatc ttgtcgactt cttgcctcaa aatcttgtac ctcaccttcc caatgatttg
     2701 ctttgacatt ggttgcatcc agcatgagtt taccatttgc agaatttgta acaattttac
     2761 ccgcttgcag ttggttgttc tgccacgttt cagtttcgat attctccttg cctttacctc
     2821 cactcactcc tgcctcaaaa ccaataccaa aactatctct atctaaaccg ataaatacgc
     2881 ccacactcgc actgtgattc ttattcttag tgttgttttg ataagtatcc gcaacacctt
     2941 tggattcaat acccagctta ccgtcaagca gcagggtgtc tttcactcgg gtatccaccc
     3001 cttccagcgc aactttgccc gctcccgaaa tcaaggcaat attgccgccg ttcagggtgc
     3061 ttttgctgtg ggtcacgctt tgactacggc tttctctttg ctgtttttgc gtgccgagac
     3121 tgactgaaat cttcaccgcc ggattttctg ccgcagcatg gttttctgtg agtgcattgc
     3181 caagattgcc cagcgtttct gccactttct gagcattttg tgctgcaatc acggcatcct
     3241 ccgccgcttt taccgcatat acccctttga gtttctcgtt ttgtgttgcc ttcgcttttt
     3301 gcaccgattg ccgtgccgat tgcaccgcat ccgttaccgg tgtactcaac gcaatgctta
     3361 agcccgactg gctaaattca taattatcgg tgctgttaat aacatctttc cctgattcaa
     3421 cccgtacccc gtttttgcct gaaatcacgg cggttttttc gttggaaatc agcacatcga
     3481 cattgctcac gctcgcttta ttgccggctt gaatccgaat attgccccct tcactgccca
     3541 atgtattgcg tgccgtgctt tggattgccc cctctaagct gttctcttgg cgtgtttttt
     3601 ggctaccgat agtaaagccg atttcaccac cgttcaagaa accgctgcgt tttgtctcac
     3661 gaatatgctg ttctgaaagt tggtttgttg ccgaactgag cgttacatta ttaccgccga
     3721 taatatcaat atcgccactg cgtgagacgg caagaagact ttcaccttga atatcgtgac
     3781 cggctttcac taaaatgtct tcaccggtta gttcagtgcc tttgtgttcg gtttcagaaa
     3841 tattgtcata agtcgttttt gttttcttcg ctagcgcacc accacttttt gttttgtgat
     3901 actcttcata atcgcgagaa cgtgttgcgc tacccaacac catatcattt tcagccagta
     3961 acgctaaacg cgctttggca tccaaatccg ctccttcact gtaaaggttt ttccctgaaa
     4021 ccaccacatc gcctttgcct tgcacccgtg aaatgaccac atcattcaag gcttcattac
     4081 gatagtgatt gccaccgccc attttttcat caaaaccaac ctgtaaagcg gtcaaattca
     4141 actgattttt tgcagataag taggtctgcc cctgtccgtc attgatgatg tctgcgcctg
     4201 ctgaggtgat gttgcctgcc tgtacttgca gcagtccatt ttcatcttta acgtgcagta
     4261 gggctttgcg gtcaaggttg gtttcagcgc gtttgaaacc gtctaggtca atctgtgtgg
     4321 ttcgagtggt ggaggtatgg ttaaaattgc ccgcaatatc cagcaaaatc gctttatccg
     4381 cttcaatctt gccgccgata ttctctagat caccgctcac tttggcagca agcacgccac
     4441 cactgagtgt gccactattc tctaaccgtt cggcattaaa ctgtgctaaa cggcggcctg
     4501 ctatcgtgcc ttggtttaca atctctttac tgttgatggt aagcgcatcg gctgaaatca
     4561 ggctgccttt gccgtcaata tcacctttgc gtgcaaggac atacactttc ggcactaata
     4621 ccgataccgt ttcaccgctt ggcaagcgaa ccgtttgggt ttcaaaccaa acaatatcgc
     4681 tggtcaagct tgccacttgc tccggcgata aggtaatgcc taaccgaaga ttgaatttct
     4741 gcgcaaaggt gatgccggca tccatcaggg ctttatattg gctatcaaaa tccgtatagt
     4801 cgcccaaaaa ttgtctgccg gttaagcggt tgatttgctc tcgaattaag cgctgttcat
     4861 aaaaaccatc gcccaaacgt ttatgcacat tgttatggtc gtggcgtagg gcattgaaca
     4921 tataatcact gcttaaccag cgttttttat cggtgaaatc cggatcggtt tcgatcagaa
     4981 catggctatc cgcttgaggg ttaatgcgat aaagcccttg gtttggcaaa cgggtatcga
     5041 ccgtcattga gcgaacctca aatgcggctg cattcgggct tggtatgcgt tcaatcgcca
     5101 ttgttggcgg attaggggca tcgggtagat taccccgttc aacctgattg ccttccggct
     5161 tcacggcatt tgctgcttta gcgtccacat aatctgtata agcggtcggt gaagtatttt
     5221 ccagctcgac aaaaatattc atatccttat ggacttcttt taaacgagcg agaggaccat
     5281 cattttcatc gtagcgggag tggcgacgtc ttgtgcctcc gtggtactca gtaaaagaga
     5341 attggcgcct tcccagttcc caatcttggc gaacagcatc tgcatcatca aggttggcaa
     5401 ttctactgcg accaatcggg tttaacgctt tgcctgcaat aacccaactt ttatcgttga
     5461 taaattcatc gctttgataa gtgagatcgc cacctgccaa gatctgtgcc ggtaagctgg
     5521 ctttggtgat attctctttt accatacgct ctttaatcca caaattccag aaatgcgggt
     5581 attcttggct taaattcgct ttattgtgct ttgcaatcgc ttcatctaat gcttgaatat
     5641 tggcaccata ttttgcttcc caatcaatta acggttttaa tagcacataa cgctgataag
     5701 ccgcttctgc cgcttcatag gctttcagtt ccgcttgata tgtttgtagt cgtttttggt
     5761 attgggcttc cgtttccgta gagcctctaa caggttcaat cggtcttgcc ggaaccaccg
     5821 gtgcaatgcc ttgcccttgt tccttctgta atttttcctg ctctgcctca cttaaatgct
     5881 gattcgctaa atcttcttca ttcattgctt gaataatttc aggcgtcatt tccggtgcat
     5941 cttcagctgg tggtgttaaa ttaaaccacg tccatactgg gttatctttt ttataattac
     6001 ctgcaggtaa tagagtacaa tctacacttt catcattcgc acagctttga gcatagggtt
     6061 ttgccaatac ggtcgtggca ttcagctggc taatatcggt aattaccggc aagtttgctt
     6121 catcatactt ttgccaatag ctccacgttt tgcgatagta gcctttgcgg agttgattca
     6181 cattaattgt cggcaaatgc ccgttatcat atacatcact tccacctcga ttatgcttat
     6241 ctcttggcaa aataaaatgt tcgttcacag tttggcgatc agtggtctcc aattccgaac
     6301 gataatgact atttacattc gctaccttat ccgcattcaa ctgaatacgc ccttcagctt
     6361 caataatact gctgcggtta tgtagctgcc ctgcgttgcc aataacggta tcttgctcat
     6421 ttaattgacg tccaatcgct atctctcctc cgctatatat taatgaaccg cttttcttat
     6481 tcgcttcata aactagggta ttattttcaa ttactttagc cgctaaaccg agagattgac
     6541 gagcagcaat agtggcagag gtcccgtctt tatcttgatt tagtatcctc tccgcaccta
     6601 acgccacctt atcgccataa atattccctg tgccgatatt gtggatttct tgagctttaa
     6661 tcacagtttg agcgttatcg ttgtccgagc ggctattgat taagccttcg ttatagacgg
     6721 ttgaagttgc agtcaaacgg gtatctgccg agcttattcg ggcattttgt gcattggtta
     6781 tttggtttgc cgtgagctgc aagcggtcat ttgcggctaa ttttttgcga ttgagaatat
     6841 cgccctcagt ctgaataatc atcgacctat tcgcattgat atctttggta atatcaaagt
     6901 tctcttgcaa attcaggcga atatcgcctg cttgtacatc accatcaccg gataacgctt
     6961 tggcagtgat ctccaaacca ttatttgcag aaacttttcc ctcggtattc gtcattgtga
     7021 gtgattttcc gccgaaaata gccagatcgc cccaacttaa aatttcccca ttacggttat
     7081 ttaagctgtc gctgagggta aatcgtgctg atgagccgat ataaataccg cctttttcat
     7141 tattgagctg ttttgtgctg ttcagtacaa actgcgatgc aataatcccc tgtattggct
     7201 gaggttggcg tgccaaggta ccttgatttt ccacctcgaa actgttcatc gtaagtgagc
     7261 cacctgcttc aataagtgag ccattttccg agatccgatt atttaagaca gtcggtacat
     7321 tgagcgtgat atctgtggcc gatttcagta ccccaccttg gttatccaaa agcgtgctat
     7381 ttagggtgag atttcccaca ctttgaataa caccgtgccg attatctact tgttgggaaa
     7441 ccgtgagcgc taactctttt actgaactaa tttctccctg ctcacggtta tctaaggatt
     7501 gagcgttaat cgcaacaccg ctggcggaaa ttcgcccgcc ttgattttgc agttcgctag
     7561 ttatatcaag ggtttgctcc gtttgagagg tgatcacccc cgattgattt tttaacgtat
     7621 tgaccgtaat cgcctgtttt tcgccactca aaatcagacc ttgctgatta ttcagcaatg
     7681 gagcacgaat agataactcg ccttttgcaa ccaatttgcc atcgactgaa tccacagcat
     7741 catttaaatt tagccctaaa cgcttgccac tacttaatag cccttggtta tttgttaaac
     7801 gattaccgtc aatctcaaaa tgtccaccca ctgaaaagcg agccgagtca gtatggatac
     7861 tctctgcttt taggcgaaaa tcctgctcac cagtctgctt ccaaaccgag ccacgagcat
     7921 ttaaattcgc ttgttgggcc tcaatcacct ctgcggttag ctggcttcct tcagtggaaa
     7981 gccattttgg ggtggtgagc ttgatctgat ttgcactaaa ctgcgcacta ttcgcctgaa
     8041 tatcgcccga ttttgcactg tattcaacgg tatgggcatt attttggctc tgattggcat
     8101 caatctcagc tgccgccacg ttaattttcc ccgaagcgat attttttccc tgcacagtgg
     8161 ttttttctgg ggcagtgagt tgaatagttt tccctgccac agattgagct tccagcttcc
     8221 gtacttcacc ttgtgcagtg tcggttacgt ccaccccagc ggcaatcagt gagtttttgt
     8281 cggcgtgaat ttggcgggcg gtgtaggtga tattgccttt tgcgaccgtt tcgccacttt
     8341 gctggatttt agtttcggct tttttctgaa tattgccacc cctcgccacg atggaaccgc
     8401 tattttgaat atcggctttc gagttaagct gaatattgcc ctgtttattt tcaattttgc
     8461 cttggttgtc aatcccgtgt tgggcattga gttgcacttg tctttgagcg ttgaacgtgc
     8521 cgctgtttac aatccgccct tgactgtcaa tggtgagcgt atcggcactt gcaccgatat
     8581 gcccagcgtt acgcacgccc acgccctgtt ccgtaccaat caggtggatt ttgccggcat
     8641 acattccgcc cagctcaccc acatcaatcg caactgtggg cttttcttcc cctgcaagcg
     8701 gttgatttgt atgaataatt tgcaaattgt tgtccgaatt tgaccgcttg acggtgtttt
     8761 tgccggtaat gactttagtc tcttttttcg accagacacc ggcgttgatt ttcgcttctc
     8821 gggcgaggat atcggtgtaa tccactcggc tgttgtccag ccctttgcca gcaaccgtta
     8881 ccttgccttt ttccactaca aaaccttcta aattgccttg atttatctgt ggttttccgg
     8941 tggtcagcgt ggctcggtcg gcgttgataa taccgcagcc gtcacagtgc aagccgctcg
     9001 ggttggcgat aatcacttcc gcttttttgc cagccacttc cacataacct ttcattaccg
     9061 aaggcttact ggaattgact tcatttaaaa tcaccttcgc ttcgccacgg gcaagatacg
     9121 ggttgccttg caccataccg gcttgttggg tggcggtgtt ggtgcggctg ttgttgagaa
     9181 ttgccccctt ctccgctacg tcaaattggc tgtatttatt gtgggaaagc cctttatcgt
     9241 tcggggtttg aatattgatt tgtggcagcc cgttggcggt ttgcaaaata atcggttgct
     9301 gatttttcgg ggcagtgcta tcggcttgaa taatcaaagt ttccgccata gcgttgtctg
     9361 ataaggtaac gaatcccaac gcacagaaca agctgaacgc aagcggtcga attttgcaaa
     9421 ttttttgtaa aattgcaccg cttgtcatac tttcactttc tgatttacct gctaattttg
     9481 ctaattcaga taccaccaca atacgttgta aggtcttgct gaaaatagtg cgaaaacaat
     9541 gcttattcat aataattcct taatagcaca atatacttaa tacaatatgc ccaatcattc
     9601 attaaaaatt gtaaccaata ttaaaaccgg caacggtgtc tgaggtttta aacccttccg
     9661 gttttcgcat cggtctaccg gcaaacacgt cataactaaa tcctttaact ccaccccgaa
     9721 acccaatggc tgttcccatt aaatgatgtc cgagctgatt ttccgttgcc caaccggaca
     9781 ctcgaccacc atctaccgcc caataaaaag cgtggttcgg attaaattgc cagctcaact
     9841 cattacgcca gttccagccc cgctcaccgg aaagagtcag ttcaccgtca aatccacgta
     9901 tggtgtaacg cccgccaatc gaaaaacggt cttgcggaac cagaggggtt ttattccatt
     9961 gggcatttag gctactttgc cactgccatg gctgcttgcc ccaaaaaaac ggtttcgtca
    10021 ggcttgcact tgccgtgatg attttagggc gagaagtccc ttcgccataa tcttcctcgg
    10081 gagcagataa tgcccctcgt gctgccgtac ctcgtttgaa attagccgaa agctcaagcg
    10141 tagcggtcgg gaaatattct ttatgcgaaa aacccgcttc ccaacctgcc attcggcgtt
    10201 tttgtacttc aatttctgag ccgtcaatat agttttgcga ctggcgtggc caaagtgaac
    10261 cggacaagct cgttttacgt ttggcatcac gataaagcaa ataagaaaag gttaatttat
    10321 cggtatcact ttcaccggcg tagagatagc tcttgtcaaa ggcaccaaat acttcttgat
    10381 gataacgatg atgagtgtgt gaaaatgcta actgccaata gccaaacggc acggaatagt
    10441 aaagcgtgag atttttactg gcacgtctgc cgttatcatc acctttttgt ttcatcgaat
    10501 gggtaaaaga ggtatagaac aggtcatttg ccgaaaaaat attatctata gacagagtgg
    10561 cggaggtttg taatttgcct gtggatttcg agccggcatc gtccagccca agatttaagc
    10621 gaaatggaaa cgcttgcgaa tagctgattt ttaaatcact gtctcccacc tccgcttttt
    10681 cgcttgagct gggtaaaatc tcaatatttg cctccgccgt cggcacccgt tttagatttt
    10741 ccagagactg ctcaatatct cgcacattca gaatatcgcc ttcggcaaaa gtaaaaccgg
    10801 ttaaggcgtg cagcttggta aaacgcggta ctttgccgct atctaccact aaagtattgc
    10861 gtattttgcc cggaatcacg gttaaaacta attttccgcc acgtaaatct tgctccgcag
    10921 taaccactcg tgtagtgaca taacctttgc caataatttc attttggatt tgcttcatca
    10981 acacagctaa cccttcacca ccaaagcagt gaggtaatgt caaatgaaat gattttactg
    11041 ctttttcaaa cgcccattgg aattggctgg tagtcagaga attgtcagga gaatagtcaa
    11101 tgagagtgat ttgatgaatg gggtaacaag gcaattcgtg attggaaaga gtaagtgtat
    11161 cattgatttg tgtctcgagc cgtacatcag ctttcggctg gaatttttct gcttgatttt
    11221 gttggtattg ctgttggcga tgttgctggg cagcatcaat ttgttgttga gttgcatcaa
    11281 tgcgtgcttg ttgtacaagg cttgaagaat ttgcttcagc aacaaaagaa gcacttaaca
    11341 ataccgtgct taaaatcaga ttttgtgggg ttttcataag atcaaataag taagacattc
    11401 aacgttttta gtctataaaa atttatgttg ttttgcaaac tccgttttat ggagctttat
    11461 acatatctga cgactttggt tttttatgct attatctccg ccatttttat actatagaga
    11521 atagaataac cgtgttagtt tcagattttc atttcaactt acccgatgag ctgattgctc
    11581 gctacccgac tgccgaacgc tctgccagcc gtttattaca cttaaatggc gaaacaggcg
    11641 aatttgccga tcaacaattt gtggatttat acgatcatat caacgaaggc gatctattga
    11701 tcttcaataa cactcgagtg atcccggctc gcctttacgg tcgaaaacct agtggcggca
    11761 aagtagaggc attagtggaa cgggtgctag atgaacaccg ctgcttggct cacgttaaag
    11821 cctcaaaagc accgaaagaa ggggctgaat tgatctttgg ggaagataag ctaggtgaag
    11881 gcaaaggctt tacggcgaca atggtagctc gccacgatac tctgtttgaa ttggtgttta
    11941 acgaagagca accgttattc gaattgctac agcaagctgg tcatatgcct cttccacctt
    12001 atatcgaccg ccccgatgaa gatgctgacc aagagcgtta tcaaaccgtt tatagcaaag
    12061 tgttaggtgc agttgccgcc cctaccgccg gtttgcattt tgacaatgca atgcttgaaa
    12121 aactaaaagc aaaaggggtg gatactgcct tcgtaacatt gcacgttggt gccggcactt
    12181 tccagccggt acgggtagaa accattgaag atcataaaat gcacgccgaa tatgccgaag
    12241 tgagccaaga agtagtcgat aaaattctcg caacgaaagc caaaggaaaa agagtgattg
    12301 caattggtac gacatcagta cgttcggttg aaagtgccgc ccaagcggct gaaaaagatg
    12361 ggaaattgat tgctccgttc ttttctgaca ccgctatttt cctttacccg ggaaaaacct
    12421 ttaaagtcat tgatgcgtta gtcaccaatt tccatttacc ggaatccacg ctaattatgt
    12481 tagtctcagc atttgccggc tatagaaata cgatgaatgc ctacgcccac gcagtagaaa
    12541 ctaaataccg ttttttcagc tatggcgatg cgatgtttat caataaaaac ccaaatgcgt
    12601 tgagtgatgt tccttaattt atgagggtta taagggaata acattatgaa caaaaacaat
    12661 cttccaacca ttttaaggga ttgttttcaa tatattcaat aatttggaag tacgatgttt
    12721 cattacgaat aatgtgttca taataattcc tttgccaaat ttcagaaata tcggtatttt
    12781 gacgaaccca tttagttacg ccaattttaa aaccacgcac aatagagccg attgttcgtg
    12841 atgttccccg taagggcgaa acatttttcg cccttataca tggggcaaat gatgatttgc
    12901 ccctacagtt tcgacgattt caataatgcc atgtaaatga ttaggcataa tcacaaagct
    12961 atgcaagctt acatttggaa aatgatcggg tatatcttcc caacattgac gtacaatatt
    13021 ccctatctta ttaagcctca tttcatcatc aacaatctca ccgagaaaat ggtgtttatt
    13081 tttacaacaa atagtaatga aatagaatcc ttgtgatcgg taatcataat gctttagacg
    13141 aattgaacgc ctcctatgaa tctccggctg atatttctgc atttttctta ttccttaata
    13201 aaactgctta taccaagggg aaaatgcccc ccttgcctgc tcaatttcaa tagaacttgg
    13261 gtaaaatttt actcttatca ttcccgtttc tacggtattt aatacattaa tatgtcttct
    13321 gtttaatctc tcaataatct gtttattcgg taatttccat gggttccatc ttccagcaga
    13381 aatcactgca aatgctggct gggtaatcga taataaagtt tcgccagtgc tgcttttgct
    13441 accgtgatgt ccaacctgta gaaaatcaat tttgccgagc tgatgggcaa attggcgttc
    13501 ttgttccacg ccagaatccc ctgtcagtaa tatcttcaag cggtcgtttt tggctaaaat
    13561 aacgcaagag tcttggtttt tagctcgttc tgcaatgtgt gacgggtaaa ttgccaataa
    13621 ttgccattcg ccaaattgcc acgatgttcc ggcaatacaa ggctcgggat ttatattgtg
    13681 atacgtcacc ttgcttgaac taattaacct tgcttttggg tatgcttgca ataactccac
    13741 taccccacct gaatgatcat tatcatcgtg acttagaaaa atcgcctcta cctcaatgcc
    13801 atttcgcttt aaatacggca agatttccat ttttgccatt gaattgcgac taccatcatt
    13861 tgcttgccaa ctggagccgg tatcgtaaat taccgcttta ttttgttgat aaatgaacgc
    13921 cattgccagc ccttgcccaa catcaaacat aatccattct gtttgggttt gattaaagag
    13981 cttagggaga taaaaactca gattgaacaa tagggatacc gctactgcac ttaaccactt
    14041 tttataagat agccgatata atttgcaata cagcaatact aaaaccaata aattcagtga
    14101 aagtaactgc cactgttgcc aatggcttaa tgcaaaccac gcattagaaa atggatctaa
    14161 cagccatagg ctaaattgag caagatagtc cgccaacagc cacgttgaaa acagattgtc
    14221 ggtcaagagc gtaaataaaa taagcggtac aagcaaaaag ctatacaacg gcacaataat
    14281 caggttggca agcagtgcaa aagcagagat gccctcaaaa aagtagagtt gaaccggtga
    14341 gaaaatcagc caaatgccga tttgtaagtg caaaagcgat aaccacaagc ggttaaattt
    14401 tgtgattttt ttacgatatt catcgtttaa aaatcggcta agaggaaaat attgatacca
    14461 taaaattaaa cttgctaccg ctaaaattga gagccaaaaa ctatcagaaa gcaggctcaa
    14521 tgggtcaatt aaaatcagta acgccactat tctcccccaa tattgccaag gggtatagtg
    14581 tcgccgcaga acttggcaaa gcaagacaaa cgcaatcgcc agcaacgctc tggcggtcgg
    14641 cacggcaaaa ccggctaaat agctgtaacc aaatgcggtg atgaagctaa ctattcttgc
    14701 aaaataaagt gaaaatccga ccgcttgtaa tgcggtaagc tcgcttttca agcaaagcca
    14761 ttgcacgcct ttggcaaagt aaacaccaaa caacattgcc agcccgatat gcaagcctga
    14821 aatggcaatt agatgggcag tagcggtttg ttggaattgc ccccagtgtt ctgttttcag
    14881 ccacgccctt tcaccaaaag ccagagccaa taaaaagcct tgcgtaggca aagcgtccgt
    14941 ttcagctttc actttattca gccaatttgt tcgcaagcta taatcagttt tggctaatgt
    15001 ttccaccttg cgaaccgttg ctgtcatatt gatatgattg gcaaaatacc aacgctgtcg
    15061 gtcaaaatta ccgatattgc tacgagctga aataggacga agagccagtt cggcttgata
    15121 gaattgatta agtaacaacg gctgtttcga ttgccagttc aagtagatct tctcgcctgt
    15181 atttagtgtc gcaatcgctg tttgataatc ggtttgtttt aagattttac tgatttcaaa
    15241 ttgaacaggc gttttactag cagtcgtttt ttccgcattt tttgcaactt gaatgatctg
    15301 aatatagcca atacaaacca ataagccgag tacagccgtt aattttgagc gtagataaac
    15361 actcaatatc agcactaagg ttcctattac tatacccaca aatagaaacg ctttaggcaa
    15421 ccataaaata ggcagatgaa atagaatcag ggcaatacaa aaacggtcta aagtcataat
    15481 tcggcttact ttttaaagct gagtatgccg tttgtgctta atattttcag aataaatttt
    15541 cagattttcg acacagttcg caaaaatact tgaaaaaata aaggcagact ttttagcctg
    15601 ccttataaag aagagatatt atgctgattt ttgatcttca gcgtaactta ctgctgcagt
    15661 gaataatacg tctgttgatg aatttaatgc ggtttcaacc gagtcttgaa tcacaccaat
    15721 cacaaaaccc accccaatta cttgagcagc aatatcgttt ggaatattaa ataaactaca
    15781 ggctaatgga atcaataata atgaaccgcc tgccacacct gatgcgccac aagcacagat
    15841 tgatgcaact acgcttaata gtagtgctgt tgcgaaatca ggttgaatac cttgtgtata
    15901 agctgccgct agggttaata cggttacagt aatcgctgca cctgccatat taatacttgc
    15961 acctaatgga atagctacag aagcgatctc atcacgaacg cccaaacgct tggctaaatt
    16021 catattcacc ggaatgttgg ctgctgaact gcgggtaaag aatgccgtta caccactctc
    16081 tcgtaaacag gtaaatgtaa gtgggtatgg gttgcggcga attttccaat acactaataa
    16141 tggatttagt actaatgcca caaataacat tgcgccaact aagactacta ataaacgtgc
    16201 gtaatcttca aacgcatcaa taccattgat ggcaacagtt tcagctacta aaccaaatac
    16261 cccaataggc gcaaatgcaa tcacaacttt cacaacaaac gaaactgcgt tagctaaatc
    16321 atttaagaat gcttttgaac ttgccgaacc atggcggaat gcaatcccta aaccgataga
    16381 ccacgcaaga ataccgataa agtttgcatt acttaatgcg actaatggat tatcaactaa
    16441 gttaaaaata acggttttta gaatttcacc aatgccttgt ggcggggtta aaccgtctgg
    16501 gcttgcagta agctctaatg tagttgggaa cataaagctt aaaacaacag ccgttaatgc
    16561 cgcaaaaaat gtacctaata cataaagcac cagaatcggc tttaatttgc tatctgaacc
    16621 aacttcttta tttgcaatcg cagccaaaac taatacaaat actaaaatag gcgcaatggc
    16681 acgtagtgat ttcacaaaaa attgacctaa tacaccaacg ctggtagccc attctttatt
    16741 aataaatgcc agcaataccc ctagcactaa accaatggcg atacgtaata ctaaattacc
    16801 gccaagaatt tttgatgata atgattgact cataaccctt cacttctgta agacaacaaa
    16861 aaataaggat aaataaaatt tatccgcctg aaaaaatagg tttataagat tagcggaaaa
    16921 taaacaaata tggaataaac aagcggttta tttttcagat ttttttacaa aaaagtgaag
    16981 ttttttacat tccatggcta tcatattatt ttttccttag gttctttgaa catcaccatt
    17041 ctttcagtac aatagttctc taaactcttt tatttatttt atttactatg aaaccaacca
    17101 ataaagcaga ttttcaacgt gtgatcaatg cagctggcta ctctatgaag gggttaaaag
    17161 ccgcttatat taatgaagcc gcctttcgcc aagaaatttg gtgcgctact attttattcc
    17221 ctctagggct tattctaggc gaaaccaata ttgaaaaagc attattagta ggcacagttt
    17281 tacttgtttt agttacagaa ctactcaata gtgcggttga atctgttgtt gaccgcattg
    17341 gggctgattt ccacgagctt tctggtagag ctaaagatat tggctctgca gctgtattta
    17401 tggcgatggt tttactcgct ataacttgga tattaatttt gttttgttaa ctctattttt
    17461 caaccaacac tcttactgag gtatttatgc gcttaaaaaa aacattactt tcggtagcac
    17521 tacttagtgc aacatcagca atggcctacg agacaggtaa aacatatcgt tttacggttt
    17581 tacatactaa cgatatacac ggtcactttt ggcaaagtga taaaggcgaa tacggtctcg
    17641 ctgctcaaaa aacattggtt gataatattc gcaaagaggt cgcagaaaaa ggtggttcgg
    17701 tattaatgct gaatgcaggt gatgcgaata caggcgtgcc ggagtcagat atgcaaaatg
    17761 cacgtcctga tattgaagga atgaatgcga ttggttacga tgcaatggtt ctaggtaatc
    17821 acgaatttga ttacccactg caaattctct ctatgcaaga aaaatgggct aaattcccct
    17881 ttatttcggc caatgtcatt aataaaaaaa cggataaacc cattgtaaaa ccttacgtga
    17941 tgttagaacg aggcggacta aaaattgctg ttatcggatt aacaaccgaa gataccgcaa
    18001 aattaggtaa tccagatgta acggaaaatg cctttttcaa aaaccctatt gaaacagcaa
    18061 aaaacacatt agctgaaatt aatcaaaaag aaaaacccga cgtacgtatc gctttaaccc
    18121 atatgggtta ctattttgac ggtaaacatg gtactaatgc accaggtgat gtaacaatgg
    18181 cccgtacctt agaaaaagga gcgttcgatt taatcattgg cggtcatacc cacgatactg
    18241 tttgtattga tgaaaaaggt caattcaaag ccaaatatac gccgggtgag gaatgtaaac
    18301 cagacttcca aaacggtact tggattgtgc aagccggcga atggggcaaa tttgttggac
    18361 gggctgattt tgagtttaaa gatggaaaag ctaccttggt aaaatatgaa ttaattccgg
    18421 tcaacttaaa aaaaaccatt aaaaaagaag acggtactaa agaataccga ctttaccagc
    18481 ctgaaatcaa agccgatgaa gcaacctata ccttattgaa aaaatatcaa gatgagggcg
    18541 ataaaaagct taatattgaa gttggtcgtg tgaaagggtt attagacggc aaacgtgagc
    18601 atattcgctt ccaacaaacc aatctcggtc gtttaattgc acaatcgcaa atggaaaggg
    18661 taaaagccga tatcgggatt atgaactccg gcggtattcg tacctccctt gaagaaggtg
    18721 taataactta taaacatatt ctgactgttc aacctttcgg taatatgatt gcaacggtgg
    18781 atttaaaagg acaagaattg ttagataccc tcaccactat tgctctgaaa gaagttgata
    18841 ctggcgctta tcctcaattt gccggcattt caatggtagt cgaccgtaca gcaaaaacta
    18901 tttctgatgt taaaatcggt ggcaaacctt ttgataaaga gaaaacttat aaagtttctc
    18961 tgcctgacta tgttgcggct ggtggcgatg gctacccatt actgaaaaaa caccctagct
    19021 atgtcaatac aggctttatt gatgccgaaa tgctgaaaaa attcttcgaa gaaaataaaa
    19081 ttattgaggc agataaatac gatccaaaaa accagatcat tttcaaatag agctatagaa
    19141 aatgaaactc actctggcag tctctgctca aaagagctgt ggctgcctgt agattgtttt
    19201 cttactttca agtgttatag gaaatcgata aaaaatccct accaaattaa ttcatcacca
    19261 tatgatgaaa attaaaaaac ctctggcaat actttgccaa aagtctttga cttttatagg
    19321 gtaatatcac tgcttattag cctttaacac gttgttccaa aatcacattc agtgtttttt
    19381 gtttctgttt caacgcattt tcgggttcgg ctttaactag taaggtataa attaaatcaa
    19441 gaacgaaaag ttgtgacatt ttagtaccga tagaatctcc ttgcatatgc ccctgtcgat
    19501 taccattaat taacacataa ttagcctctt ccgtgacggg ggaacgtaaa ttgtgtgtaa
    19561 tcgcaaccgt tgtcgcttta tttgcacgag aaaaacgtag tgatttcaca atttcttcag
    19621 aatagcctga atgactaatc cctataacta aatccccctc tttcaccaat gccgcctgca
    19681 tatacataaa atgattattt gtgactgcat cggtttgtag cccaatacgc attaatttat
    19741 gttttgcatc ttctgcggtt aacccagaag aacccactcc aaataaaaag atccgttttg
    19801 ccttacgtaa ttcttcaaca actttttcca acacgttaaa gtcaagcaaa ttaatagtct
    19861 cttcaataac gttatctaaa ctcactttga gcttctcagc aatatctttc gatgtatccg
    19921 attctgaaac atccgtatca agcaatactc tattatcttg attttgcgta gccaactcta
    19981 ttgcaagctc taatttaaag tcggtataac ctttaaaacc taatgtacga caaaaacgaa
    20041 taaaagttgc ttcaccaaca tctaattgtt tggccacttc agataatgaa cattggctaa
    20101 gtaattccgg ctgagataaa atagcagcag ctattttctt ctctgttttg gttaaactat
    20161 tttgtagcga gctaattgta ttaagaattt ttccccgact agacatagta gcctcctaaa
    20221 tcaattcaac aggtactttc accaccagtt ttttcaatgt tttgttgcca ttcaccgaat
    20281 ttccaggctt atgtggttca taagggagga aaatagcgaa catatttggc ttgaggatca
    20341 agttattttt atcatcaatc tcagctgtta attggtagtc atcttcatct cgatattcat
    20401 catacttaga taaatctggc tggcttaacc cgtattcaat catttcttcg ccgtctatca
    20461 ataattgaat atcgataaat tttcggtgta actctgcttt tttcccctca gctggcgtag
    20521 tttcaaatga cattacattc atgcgaatac cattttctaa ttcttgccag cctaattcca
    20581 aattaactaa atctaaactt tttaattttt tacaaaggcg agcgaatact ggtggaagag
    20641 attttaaata atcatctctt gataaatcgg ctaatatcat ataattctcc taaaaataac
    20701 taattctaat aatctgctcc atactactaa aatttatgaa gatacactcc aatagaagta
    20761 ggataattcg taaaatatat aatctcaata agcaaacatc aaaaatgaga agttgatcaa
    20821 attttaaaaa atactttttg caaaaaatta gctaaatttg accgcttgtt cgcaaaaggg
    20881 aatgcaataa acgaaaaagg aagccttcgc ttccttcatt taaatgttaa gagaccgcaa
    20941 actgaagatt tgtactcgcc aatatttttt gctcttcttc taaatctatt gaaatcagtg
    21001 gattattcgc taagaagccc tgttcaaagg taagttgcca agcattattt tcaatcacca
    21061 aattcaactg tttcggcact acagtcgctt ggcgagaacg gtttaatagc accgctagcc
    21121 ggaaaacccg taccaacgtt aatacatctc tacattggta acggttgata ctacgaatat
    21181 ccgagcgttt gaatccttta aggtggtatc gcattaatac cgatagaagg gtttgctgtt
    21241 caaaatcaaa tcccggtaaa tctcggtttg caatcaaata agcagaatga cgatgcacat
    21301 tattgtggtt tacaacaata ccaatctcgt gtaataaact tgcccatttc agcattgaac
    21361 gcagatcttg cacttggcgg cggttcttcc aagttttgat ttggtcaaat aaaatcaacg
    21421 ccgtatgctc cacccttttt gcttgctgtt tatctaaagc aaattgctca gctaacgctt
    21481 ctgcagtccg ttggcgaata tccccaactt ggaaactttt ctccaaacca tacattaccc
    21541 cttctcttaa agccccgttg gaataacgta atacatcaat tctaaaagtg tgaaaaagtg
    21601 ctaaaagaat agctaagccc ggaactagca catctgctcg ttcatcaagt aagcctcgta
    21661 gcttaatctc atttaacgat ttaaactcta ggcaaatatc aataattttc tgtaggcggc
    21721 tttctgtaat taagccatca cgatagccat tggcaatcag cacttgatgg acggttttaa
    21781 tcgtaccgga agaacctaaa gcatagtccc aacctaactc tttgtactcc cacattaaat
    21841 cttcgatttt ttccattgca agctgatagg cactatcaaa acgctcaatc gttaattccc
    21901 cctgcgggaa aaagcgtttt gcaaaactca cacaacccat atgacgactt tccgctcgaa
    21961 tcggggtaaa gtcatcacca atagtcattt ccgttgaacc accgccaata tctaccacta
    22021 attttctgcc agtttcgggt tgggtatggc taacgcccga ataaatcagc ctcgcctctt
    22081 gttgtccgga aataatggaa atcgggtaag gaaatactgc tttcgcttgc tccagaaaag
    22141 cttggttatt gattgctcta cgtaaggtat aagtgccaac caccttcaca ttctctgcag
    22201 agaacccttc taaacgtttt gcaaataaag ctaaacaagc aatgcctcta tcaatcgcat
    22261 cttggcttaa tactaagttt tcatcaagcc catctgccag ccgtacacgc cgtttcaaac
    22321 gggaaagcac ttgaatggaa ccatttacga tacgggctac aatcatatga aagctgttcg
    22381 agcctaaatc aatagctgca aactctctag gagcaatatt tgatgacata atgaaaccct
    22441 gtaccaataa ctgaaataag taagatatta ccatttttga gccctagata tcactacaaa
    22501 tttagcgtta ttcgcgagaa ttaatttaaa tcataaaatg tgataaattt ttttgacgaa
    22561 ttgacggaaa aagaatagga tttacgagct tacttaattc aacactacat caagggagat
    22621 tgatatgtct gaagtgaata aatcattcca cgatatgctg gaatatgtgc atctttatcg
    22681 tctaaaaaac aaactgcacc gtgaaacggc ggataatgat cgcaaaattc gagataatca
    22741 gaagcgtgta cttttattag ataacctaac gcaatatatt accgacgaaa tgtctatcga
    22801 ggaagttcga gcgattattt ccaatatgcg tgatgactat gaaaatcgag tagatgatta
    22861 tatgatccgt aatgcggaac tttccaaaca acgccgtgaa atccgccaaa aaatggcctc
    22921 tcacaaacaa gcaccaacca ataaaaaagc ataaaaagcc aagcggtctg atttgcaaaa
    22981 aaatatgcaa atcagaccgc ttgtgattaa gcagagatta attcagcttt ttcattgcat
    23041 ctgccacaaa ttctgcttcc ggtcccaaaa tcacttggta gccattctcg cctaatttga
    23101 tattaccttt tgaccctaac gctttcaatt tggtttcgtc tgctttcgcc gtatcattta
    23161 aggttaggcg taagcgggta atacaagcat caatgctggt aatattctct ttaccaccta
    23221 atgcttcaac aaatttggca gcttgttcgc tacgagaaac agtattcact gtttgtactt
    23281 cgctatcttc ctcacgcccc ggcgttttta aattaaaggc ttggatcact actcggaaca
    23341 atacatagta aattactgcg aatacgatac cttgggccaa taacatatac cactgcactg
    23401 ccagcggatt tcgtgtcgat aacactaaat cgaccaaccc tgcactaaaa ccgaaaccgg
    23461 caatccattc cattgaggct gcaatataaa cagataatcc ggttaataat gcgtgaacca
    23521 cataaagcac aggtgcaaca aacataaagg caaattcaag cggttccgta atgccggtga
    23581 agaacgaagc taaagcagca gcaaacataa tagaggctac ttgcattttc ttagccggtt
    23641 tcgcactgtg gtaaatagct aatgctgccg caggtaagcc aaacatcatc atcgggaaga
    23701 aaccagcttg atacatacct gttactccta tcactgcttt gccctcagcc aatgattttg
    23761 ccccacctaa gaagtttgga atatcattaa tgcctgcaac atcaaaccag aaaaccgagt
    23821 ttaatgcgtg gtgtaatcca accggaatta ataaacgatt aaagaaagca taaatacctg
    23881 cccctaacgc ccccatatct ttgatagatt ccccaaaaga gactaaagca ccaaaaataa
    23941 ccggccagac ataaagcaag ataaatgaca ccacaatcgg caccaatcgt ttaccgctaa
    24001 agaaagacaa tgctttcggt aactctactt ggtagaaacg gttataaatt tcggctgaaa
    24061 taacccctac taagatcccg ataaattggt tgttgatttt accgaatgct gcaggcactt
    24121 gatcaactgc gatccctttt agctgagcaa cggtccccgg agacaacaaa gtggtaatta
    24181 ctaaataccc gactaaaccg gataatgctg ctgccccatc tttttctttt gacataccaa
    24241 atgccacacc cacggcaaat agaatagaca tattatcaat aattgccgcc ccagatttaa
    24301 tcagcaatgc cgctaattgg ctatttgttc cccagccgtc cggatcaatc caatagccta
    24361 tacccatcaa taatgctgct gctggtaatg cagcaaccgg caccattaat gcacgcccaa
    24421 ttttttgtaa ataggttaat gtactcataa aagcctccaa aaatacctca taatgagtaa
    24481 cttaagcata gaaaaaaacc gattaaagaa caatcaaata aatttggttt tgtgatccat
    24541 ttcaaaatat tttttaggag tttttattca acattagaaa tatgtttact ttttatcgct
    24601 atattttaaa taattaccta aatagcattg gattacctaa atattcattg acaaaacatt
    24661 aataaaacgg tatttctatg cacacttttc aatactgttg aaaaagagta atgggcttgc
    24721 cattacggga gaggtgcaac actcaggcaa cttgatttta ggcaactagg gccgtttgag
    24781 aattaagtga tgggagtgat tgccgaggtg tgaattcact agactggaat taacatcggc
    24841 tgaataggtt gaatcctatc agctgtcatt taataggtta tttcaccata ttaaatggag
    24901 tgctctgatt aattggttca acaataaaac cgtataatct actcaaattt cctttccgaa
    24961 tatcccctaa cacaatattt atctattttt gttttaagga aatttttatt atgtctcatc
    25021 tttctgtggc taaatttggt ggtacaagtg ttgcaaattt tgatgcaatg acctcttctg
    25081 ccaatattgt aattgctgat gcaaatactc gtgtggtggt actttctgcc tctgctggcg
    25141 taaccaatta cttagtggaa cttgctaacg gctgtgaaaa agaacaccgt gatgaagtca
    25201 tcgcagcagt ccgccaaatt caatacaata ttattgaaaa attacaacat caagatgccg
    25261 ttaaagcgga aatcgacgaa ttattagaac gtattgaaac attagcagaa tcagccagcc
    25321 ttgctacttc agctgcctta agtgatgagt taatcagcca tggggaaatg atgtccacca
    25381 aaatcttcac gcaattatta attgaacgtg gacacccggc agtatgggta gatgtgcgtg
    25441 acgttgtggc aacaaacagc cattatggaa aagcagcacc aaatgacgag aaaacccagc
    25501 aacaatcaga caatgtgatt aagccattaa tcgcatcagg caaaattgtg attacacagg
    25561 gctttattgg tcgtgatgat gaaggcaaaa ccactacttt aggacgtggc ggttcagact
    25621 actctgctgc attgttagca gaagtattaa atgctaacga tgtactcatt tggacagacg
    25681 taccggggat ttataccacc gatcctcgtg ttgtaccgaa cgctcaacgc attgacacaa
    25741 tggcatttaa cgaagcggca gaaatggcaa catttggagc gaaagtatta cacccagcaa
    25801 ccttattacc ggcagtgcgt agcaatatcc ctgtatatgt tggctcaagc aaagcaccgg
    25861 aacaaggcgg cacttgggta acccgtgatc cacaaccacg cccgactttc cgtgcgattg
    25921 cattacgccg caaccaaatt ttactcacgc tttccagcct ttcaatgcta cacgcacaag
    25981 gtttcttagc gaatgtattt gcgattttag cgaaacacaa aatttcggtt gatgtgatta
    26041 ccacttccga agtcagcgtt gcattgaccc tagataaaac gggctcagcc tcttcaggtg
    26101 cagatatgtt atcagcggaa ttactcgatg agcttaacgc atattgcaat gtgcaagtag
    26161 aaagcgacct cgctttagtc gctattatcg gcaacaactt acacgctcag tccggtgtgg
    26221 cgaaaaaatt attccacact cttgagaatt acaacattcg cctaatcagc tatggagcaa
    26281 gcagcaataa tgtttgtacc ttagtgaaaa atgcagaagc agacgatgtg gttcgttcgc
    26341 ttcacaaagg cttatttgaa taagcaataa ctccattgca agcggttatt tggggcaaaa
    26401 ttgttggatt taccccctaa ccgcttcttc tctttactca acaatctcta ccgttgaatt
    26461 ggtactaagc cctctcacta gctgtgagcc ttttcttgct cgttcgccac ggtagttatc
    26521 aacatcgctc ggttttaatg tgattttgcg tttaccggac acaaagacca gcgagttggt
    26581 tggtttgatg actaataaac gggctaaata ttcatcaccg gattttgccg ctgcggcgga
    26641 aatattgatg attttattgc ctttaccttt ggaaagttga ggtaattcac tcaccgggaa
    26701 aaccaacatt ctgccaacat tactcatcgc tacaagcgat aaattttcat cattttccaa
    26761 taattgcggc ggcagtactt ttgcattttc ggttaaagaa ataaccgctt tgccggcttt
    26821 attacgagaa actaaatctg caaaggtgca aataaagccg taacctgaat cggatgccat
    26881 tagcacttta gtttctggac ttgccattag cacttgctgc actactgcac cttccggtag
    26941 ggtgattttg cctgtaagcg gttcgccttg cgagcgtgcc gaaggcagtg aagttggatc
    27001 gagagcataa gctcgccctg tactgtctaa aaataccaca ggctgattac ttctacccct
    27061 tgcgtgggca agataaccat ctccggctcg atggcttagg gcttgaacat caatatcgtg
    27121 tcctttcgca caacgtaccc agcctttttc agacaaaatc acagtcacat cttcggttgg
    27181 agtcaagtca ctttccgcaa tcgctttaga ctccgctcgt tcaaccaatg gtgagcggcg
    27241 tgggctggca aatgctttgg catcggcttg aatctctttc ttgatcaggc tgttcaaacg
    27301 gcgttccgag cctaaaatca gttgcaattc atcacgttct ttttccagtt cggatttttc
    27361 cgcctgtaat tgatgctctt ccaatttggc taagtggcgt aaacgtaagt tcaggatcgc
    27421 ctctgcttgc acatcggtca gattaaaacg agccattaac tcggctttcg gctcatcttc
    27481 attgcgaata atctcaatca cttcatcaat attgagaaat gcaatcatca aaccgtctaa
    27541 aatatgcaag cggtttaaaa ttttatctaa tcggtaattc aggcggcgag tgacagtggt
    27601 acgtctaaaa ctcagccact cattgagaat agtcagcaaa ttcttcactg ccggcttgcc
    27661 gtctaagcca atcatattca tattgactcg gtagcttttc tccaaatcgg tcgtcgcaaa
    27721 caggtgatcc attaacgcat caaaatcaat gcgattagag cgtggcacaa tcacaatgcg
    27781 aatcgggttc tcgtggtcag attcatcacg aatatcgtcc accatcggta gttttttatt
    27841 ccgcatttgg gttgctactt gctcaataat ttttgaagga gaggcttggt gcggcaaggc
    27901 tgaaatcaca atttcaccct cttctttttt ccacaccgca cgcattttaa tagaaccacg
    27961 cccctgctca tacattctgg caatttccgc ttttggtgtg atgatttcag cctctgtcgg
    28021 gtaatccggc ccttgtacca cgcttagtac atcatcaagc gttgctttcg ggttatccag
    28081 caacatcaca ctggcatcag ccaattcatt aatattgtgt ggtggaatat cggttgccat
    28141 tcccaccgca atccccatcg tgccattcaa caaaatatgc ggtaaacgag ccggcagata
    28201 tttcggttct tccaacgagc catcaaaatt tggctgataa tccaccgttc cttgccctaa
    28261 ctcgcccaat aaaatttctg caattttaga cagtttcgat tcggtataac gcattgcagc
    28321 gaaggatttc ggatcgtccg gagcccccca gttgccttgt ccgtccacta acggatagcg
    28381 gtaagagaac ggttgagcca ttagcaccat tgctttatag caggcactat caccgtgcgg
    28441 atggaattta cctaatacat cccccacggt acgggctgat tttttatact ttgccgaggc
    28501 gtttagccca agttccgaca tcgcataaat aatacggcgt tgcaccggtt tcaagccatc
    28561 gccaataaac ggcaatgccc ggtccataat tacatacatc gaataattga ggtaagcatc
    28621 ttcggtaaaa cgcttaatcg gcatctgttc aatgccttca taattgattt ctgtggtcat
    28681 tttttatcga tatttatatt aaaaaaacga gggctatttt ctacgattta gcctgtttag
    28741 tctagcctga aacacaagcg gtcgtttttt ctgatttttt taccattgtc atcattttgt
    28801 catattcttt ttctacacta agcacgtgaa attaactcac gctaacttta aggagaacaa
    28861 tatgattgcc aaacgattta aactacttac cgttttaggc atttcttttt cactttctgt
    28921 cgcagcaaat gctcaaacca tcacaggagc cggtgcttct ttcccttatc ctatctacgc
    28981 caaatgggca ggtttatatg aaaaagagac cggtaataaa atcaattacc aatctatcgg
    29041 ttccggtggc ggtcagcaac aaattattgc caaaacaatt gatttcggtg cttctgatga
    29101 cccgatgaaa ggcgaaacat tagcagaaca caaacttttg caatttcccg ccatcattgg
    29161 gggaactgta ccggttgtca atattcctga acttaaatcg ggcgaactga aactgtccgg
    29221 taaagttctt gccgatatat tcctaggcaa aattacacaa tggaacgatc cggcaattgt
    29281 cgcacttaat caagatatcg ccctgccggc aaaaacaatt ttagtcgtac gccgctcaga
    29341 cggttcaggc acaactttcg gttggacaaa ctatctttct aaagtctctg ccgaatggaa
    29401 ggagaaagtc ggcgaaggaa aatcggtgaa atggccggtc ggacaaggcg gaaaaggaaa
    29461 tgaaggtgtc gcagcttatg tgaaacagct caagtattct attggttacg tagaatatgc
    29521 ctatgctaaa caaaatgctc tggcttgggt ttctatgcaa aatgcagatg gtaaatttgt
    29581 tcagccttcc cgtgaaacgt ttgctgctgc cgctgctaac gccgattgga gccaaacagc
    29641 cggtatgggc gttattttaa ccaacgaagc gggagaaaaa gcctggccga ttaccgccgc
    29701 cagttttatc ttgattcatc aacatagcga caaaccagag caaactaaag gggtatttaa
    29761 attcttcgac tgggcattta agcacggtaa agatgcggct gccgaactgg attatgtgcc
    29821 tctaccggat aatgtagtag agaaaatcca aactcaatgg aaaacggaag ttaaagatgg
    29881 acaaggaaat tcgctctact aatgcaaaac gaccgcttgt atggagctta actaacaaca
    29941 agcggtcgtt ttttcacaac attttgcaaa agagttgtca ctatgcataa acataaaatt
    30001 gataacaaat gcttaaacca tccttgggta gaggggttat ttcatcacac aacccgtttc
    30061 tttgctttgc tggtttttgc cttgttggtg gtggtgctgg tttcattatt gcttggcagt
    30121 tgggaagcat taagccgatt cggggtatca ttcctatggg aaaacgagtg gaaccctgtg
    30181 aatgaccgat acggtgcatt agtgccgatt atcggcacat tgatttctgc cggcattgca
    30241 ttagtcattg ccgttccggt ctcgttcggc attgcgactt tcttaaccga acttgcaccg
    30301 caatggctaa aacgccctgt cggcacagcg gtagaaatgc tagcggctat tccctctatt
    30361 atttacggta tgtgggggct gtttgtattt gtacccttat ttcaagaata tgtgcaaccg
    30421 tatttgatag atacatttgg tcagcttccc tttatcggta tgctttttag cggagctcct
    30481 ttcgggatcg ggctattcag tgccggcttg gtattggcga ttatgattat tccctttatt
    30541 gcctcaatta tgcgtgatgt tttcagtgtt gtaccgcctt tactgaaaga gtctgcttac
    30601 ggtttaggct caaccacttg ggaagttatt tggaaagtcg tgctacctta caccaaaacc
    30661 ggagtaatcg gtgcaattat gctcgggtta ggtcgagcat taggcgaaac aatggcagtt
    30721 acctttgtga tcggtaatgc ctttatgcta cctgattcgg tattttcccc ttcaacctcc
    30781 atcgcttctg ctatcgccaa tgaatttaat gaagccggcg gattacaaaa atcagcgttg
    30841 atgagcctag ggctaattct gttccttatt acttcgattg ttttagccgc ttcacgttta
    30901 ttaatcgcac gaatgggtaa acaggaagga aaacgagaat gaaaaattac caaaaccgac
    30961 gcttttattg ccgaaaaata aaaaatgtct tgatgttaag tcttgcctat tccgctgtat
    31021 tatttggctt attttggctg gtctggatta ttgttacttt actccaaaaa ggtatccctg
    31081 cactgtcttg ggaactgttt acccgcccga ctcctgcacc aaatgaaaca ggaggattac
    31141 gtaatgcaat tgtcggctct atactgattg tcagtaccgc aacactgatt gcaacaccaa
    31201 tcggtatttt agccggcact tacttgagcg aatacgggcg ttataccaaa ttggcaaaat
    31261 tcacccgttt tttgaatgat gtgttgctct ctgctccttc tattattatc ggcttattta
    31321 tttatgcgat ttatgtcgca caggttaaac actattcagg ctgggcaggc tcattagcat
    31381 tggcggtatt agtgattccg attgttgttc gaactaccga cagtatgctc aatcttgtgc
    31441 ctaataatct gcgtgaagca gctgcggctc tcggctgccc acgatggagg gtaattacaa
    31501 tgatctctta tcgtgccgcc cgctccggca ttattaccgg cgtgttgctc gctgttgccc
    31561 gtatttccgg agaaaccgca ccgctattgt ttaccgcatt atccaaccag tttgcctctt
    31621 tagatatgaa tgcaccaatg gcaaacctcc ctgtggtgat ttatcaatac gcagccagcc
    31681 cgttcgctga ctggaataca ttggcttggg caggtgcaat gcttattact ctgtttgtgc
    31741 tttctcttaa tatcatcact cgtctgtatt tcagcaaaac aaaataagga ctctatatgt
    31801 taccaacgga tttagagaca aaattacata ttaacaacct caatttttat tatggcgatt
    31861 tccacgctct gaaaaatatc aatatgcgta ttgccaaaaa taaagtgacc gcatttatcg
    31921 gtccttccgg ttgtggaaaa tcaacattac tgcgaaccct aaaccgaatg tttgagctct
    31981 acccgaatca acgtgcaacg ggggaaatca atcttgatgg agagaatcta ctcacctccg
    32041 atacggatat ttcgattatt cgagccaaag tcggtatggt tttccaaaaa ccgaccccat
    32101 tcccgatgtc catttacgat aatgttgctt ttggtattcg tctgtttgaa aaattgccga
    32161 aatccgagct aaacgatcgt gtagagtggg cattaaccaa agcggcttta tggaatgagg
    32221 taaagcataa attaaaccaa aatggtgaca gtctctccgg cgggcaacag caacggctct
    32281 gtattgcacg aggtattgca gtgaaacccg aggtgttact gctggatgag ccctgctccg
    32341 cacttgaccc gatttcgact atgaaaatcg aagaacttat caacgaactc aagcacgact
    32401 acacggtagc gatagttacc cacaatatgc agcaagcagc ccgctgttct gactataccg
    32461 cttatatgta tctaggcgag ctgattgaat tcggtgatac caaacaaatt ttcgacaaac
    32521 caaaattccg gcagacggaa gattacatta aaggtaaaat ggggtaatct gcaagcggtc
    32581 ggttttagta aaaaatttgc aaatttctgc gataaatcga ccgcttgtca caccgcatcg
    32641 gagaggaaga atgaataaca aaattctgat cgttgaagac gaacgtgcta ttcgtgaaat
    32701 gctaagtctc tatctcagca aacaatatca ggtaattgaa gcggaagact accaaagtgc
    32761 tatcaataaa ctgggcgaaa aacccgagct tattttactg gattggatga tgccggggcg
    32821 ttcgggtatc catttaatta aatacctaaa aaaacagcct gaaaccgaaa aaattccaat
    32881 cattatgcta acagcccgca gtagcgaaga agactgtatt accggtctga atgccggtgc
    32941 agacgactac attaccaaac cgttttcacc acaggtgttg cttgcccgga ttgaagcagt
    33001 atggcggcga agctatgatc cgccaagcaa tctcatcaat atagacggat tgattcttga
    33061 tcaacaggca caacgggttt tggttgccga acaggaagtg aaattaagcg gcacggaata
    33121 taaactgctt cactttttaa tgactcaccc tgaaaaagtg tatcgtcgtg aacagttgct
    33181 tgattttatt tggggtaatg atatttatgt tgaggatcgc acggtagact cttatattcg
    33241 gcgattgcgt aagagtcttg aaccctatgg ttttgagcgt tatattcaaa ccgtacgtgg
    33301 ctcgggatac cgtttttcca accattttca ggactaataa tgaaagttaa gctctcactt
    33361 aaacactttt tattggaact tttgctggca gcagccgttg ccggcgtatt caatctgttt
    33421 ttccctgctt attttttctg gtttagtttt tgtttactgg ttctacttat ttggcatcac
    33481 cacaccgaat cttctctcct tcagttactc agacctaatg agcaaagcgg caggtcaaaa
    33541 gtaacgacaa tggagcattt atctcaaagt gccgcattct atcacgaacg tttacgccaa
    33601 gataaaatca aaaccttacg tctgttatca aaattaaata agcatattca atacttaccc
    33661 gatgcgatca ttatttgcca agaaaacggg gagatttctt ggtgcaataa tgttgcacaa
    33721 gagctatttg agttttattg ggacaaaaaa tcaaataaaa gcatttttaa tgtgattttt
    33781 tatcctgaat ttaaaagcta tttccgccaa caacgacacc atcgcccatt ggtactgctg
    33841 actcataata aacgctatat tgaattgaat ctcaatcgat atgacagtaa ctccagactt
    33901 attgtcgcac gagatgtaac ctcttttgtc cgccttatgc actcacgaca aacctttttg
    33961 gcaaatatga accacgaact gcgaacacct cttaccatat tacaaggtta tttggaaatg
    34021 ctggaaaacg agccgcataa tatggcatta cagcaaaaag cgctcaatgc gatgaaagag
    34081 caaagtcaac gtatgactaa cctgcttcgc caactctcac ttttggttaa aatcgagcat
    34141 tccaatgatt ccgaacacaa tgaggtccag atgtcggcgt taatctccgc catacaaaaa
    34201 aataccgaga ttttaagcca aaatcagcaa atactgtttg atattgagcc taatttaacg
    34261 gtatggggag atcaagagca actccaaagc gctgtatcaa atttaattta caatgcaata
    34321 cggcacgccg gtgaaggagt taccattcaa atatgttgtc aacgtgataa tcaagagccg
    34381 aatactgcga ttttcagcgt gcaagatgac ggtattggta tcgatgccca tcatattacc
    34441 catctgacag aacgtttcta tcgtgtggac gaatctcgta gcaacaaaac cggcggtagc
    34501 ggtttaggtc tggctattgt caaacacgct cttgaacagc accattccac actggaaatt
    34561 gaaagtgaag ccggtaaagg aagcagattt agttttaaac tacctctaat aaaaaaatag
    34621 cgatgcaatc aaactatttt cacaaggctt ttcacaaact aatccccatt ttacactgaa
    34681 gttttgaatt tctttataac tgaggtgcaa gatcaaaata ataggcgatt ttttataaaa
    34741 atcacgctat actagacaag ttttatttct tgttattgag aggcggctat caaaaatgtt
    34801 ttacttaaaa gcctttttgc tagtcgcaat ttagagaaat aaaacgacaa taatagtaaa
    34861 ttctttaaaa ggaaaatttc aatgactcca attgtaaaac agtttaaata cggtcagcac
    34921 accgtgacct tagaaaccgg tgctatcgca cgccaagcaa cggcagcagt aatggcaagt
    34981 atggacgaca caaccgtatt tgttaccgta gtagcgaaaa aagacgtaaa agaagggcaa
    35041 gatttcttcc cattaaccgt agattatcaa gagcgtactt acgcagccgg tcgtattccg
    35101 ggcggtttct tcaaacgtga aggacgtcct agcgaaggtg aaaccttaat cgctcgcttg
    35161 atcgaccgtc ctgtgcgtcc acttttccca gaaggtttct ttaacgaaat tcaagtgatt
    35221 gcgaccgtag tatcggtaaa cccacaaatc agtcctgatc tggttgcgat gatcggtgca
    35281 tcggctgccc tttcattatc cggcgtgccg tttaacggtc caatcggtgc ggctcgtgtc
    35341 ggttttatca acgatcaatt cgtattaaac ccaaccacca gcgagcaaaa aatcagccgc
    35401 ttagatttag tggtttcagg tacagacaaa gccgtgttga tggtggaatc tgaagcggat
    35461 atcttaaccg aagagcaaat gttagcggcg gtggtgttcg gccacgagca acaacaggtt
    35521 gtaatcgaaa acatcaaaga atttgttaaa gaagcgggca aaccacgttg ggattgggtt
    35581 gcaccagagc caaatacaga tttaatcaac aaagtaaaag cattagcaga aacacgcctt
    35641 ggcgatgctt atcgtatcgt agaaaaacaa gttcgttacg agcaaatcga tgcgattaaa
    35701 gcagaggtga ttgcacaact taccgcagaa gatgaaactg tttctgaagg gactatcatc
    35761 gacatcatca ccgcattaga gagccaaatc gtgcgtagcc gtattattgc aggcgaacca
    35821 cgcattgacg gccgtacggt ggataccgtg cgtgcattgg atatttgcac cagtgtgtta
    35881 ccacgcaccc acggttctgc tcttttcacc cgtggcgaaa cccaagcatt agcagtagca
    35941 acattgggca cagagcgtga tgcccaaatc attgacgaat tgaccggcga aaaatctgac
    36001 cgtttcttat tccactacaa tttccctcca tactctgtgg gcgaaaccgg tcgtatcggc
    36061 tcgccaaaac gccgtgaaat cggtcacggt cgtttagcaa aacgtggcgt attagccgtg
    36121 atgccaaccg ctgaagagtt cccgtatgta gtgcgtgtgg tgtctgaaat cactgaatct
    36181 aacggttctt cttcaatggc atctgtgtgt ggtgcgtctc ttgcgttgat ggacgcaggt
    36241 gtgccaatca aagcagcggt tgccggtatc gcaatggggc tcgtgaaaga agacgagaaa
    36301 ttcgtggtac tttctgacat cttaggtgat gaagaccact taggcgatat ggactttaaa
    36361 gtagcgggaa cccgtaccgg tgtgactgcg ctgcaaatgg acatcaaaat cgaagggatc
    36421 acccctgaaa ttatgcgtat tgccttaaac caagctaaag gtgcaagaat gcacatttta
    36481 ggtgtaatgg aacaagccat tccggcacct cgtgcagata tttctgacta tgccccacgc
    36541 attcacacaa tgaagatcga tccgaagaaa atcaaagatg tgattggtaa aggcggtgca
    36601 acaattcgtg ctttaaccga agagaccaat acttctatcg acattgatga tgacggtacg
    36661 gtgaaaattg cggcaactga cggcaatgca gcgaaagcag taatggctcg tattgaagag
    36721 atcgttgccg aagtggaagt aaaccaaatc tacaacggta aagtaacccg tgtggtggac
    36781 ttcggtgcat tcgtttccat cttaggtggc aaagaaggtt tagtccacat ttcacaaatc
    36841 accaacgaac gtgttgagcg tgtagcggac tacttaaccg ttggtcaaga agtacaagtg
    36901 aaagtggtag aaattgaccg tcaaggacgc attcgtctga cgatgaaaga catcaataat
    36961 accaacgagg caaatgcaga agaaactgta gctgaaaatg tggtagaaac agaacaagaa
    37021 aataatttct agttcaataa taaaggcgaa taacggactt tgagtgtccg ttattcagtt
    37081 tttaattttc cttaattgag ggatatgctg taatggtaca actttttaag ttgtttcgaa
    37141 tccgtttctt attactgaat ttaatttctg ttttaatgct aagcggctgt accagtcggt
    37201 atgccgattt ggtttcaatt aaaaacttag cattggcaga acttaatcct caacttcgct
    37261 ttgaacaaga ggcaatggtg gtaagactca gccaagtatt ggaagaagcc ccattaacgc
    37321 cctctgagca agcagacctc tattttgaaa gaggcgttat ttacgacagt ttaggtttat
    37381 ggtcgttagc ccgttatgat tttgctcaag ccatttcgct caatcaacgt atggcggcag
    37441 cttataacta tatggggctg tatctgctgc tggaaggcga ttacgacagt tcgattgatg
    37501 cgtttaatgc cgtattggaa ttagatcggg aatatagcta cacctatctc aatcgaggtt
    37561 tggctttcta ttatagcggc agatattctg aagcccagcg tgatcttctc catttttatg
    37621 aagaagataa gaaagatcct tatcgagcat tatggctcta ttttaatgag ctggaattta
    37681 caccaacaga agctaaaaat aatttacaaa agcgagctaa taatctttct tcggattact
    37741 ggggaacaaa tatcgtaaat tattttttag ggaagctcaa tttagctcaa gttcgtgcta
    37801 taatggaacg tgacgctaag gaaaatagct cacaatatgc agaaatactg acagaaacgt
    37861 atttctactt agcaaaacaa caactcaaat tagatcataa agatgaggca atcagcctct
    37921 ttcgtcttgc tcttgcaaat caagtgttta acttcgttga gtatcgtttt gccctgtttg
    37981 agttatcaca aattcgtggt atgactcaaa cgactcccgt tgttgataaa gaatagggaa
    38041 agattaggac aatacaagcg gttaatttcg caaaaaattt tgtaaattta accgcttata
    38101 ctcaggggat ttttaaagca tcacttgctt tgttatttca tttcttccta aatttcaaca
    38161 atataatttt cattaatggc tgtgcagaaa aatagtcgat attttctgct ttgtgcgttc
    38221 caaacaaatg gttttttatg acaactgaat ctttaacttt cgccgattta ggcttacctc
    38281 aaccaatcct tgatgctgta aatgaaatgg gctttgtaaa cccatcaccc attcaacaag
    38341 aatgtattcc tcatttatta gccggtcgtg atgtgcttgg tatggcacaa accgggagcg
    38401 gtaaaaccgc cgcattctcg ctgccgctgt tggcacaaat tgacccaaca caacgccacc
    38461 cgcaaatgtt ggtgatggca cccacccgtg agcttgcgat tcaagtagcc gatgcttgtg
    38521 agcagtttgc aaaaaatatg aaaggcattc gtgtagtgac ggtttatggt ggacaacgtt
    38581 acgacattca attacgtgct ttaaaacaag gctcacaagt agtagtgggt acacctgggc
    38641 gtattcttga ccatatccgc cgtggcacat tagatttatc cgaattaaaa ttcatcgtgt
    38701 tagatgaagc cgatgaaatg ctgcgtatgg gctttattga cgatgttgaa acggtaatgg
    38761 ctgaattacc ggaaacacat caaactgctc tcttctctgc caccatgccg gagccgattc
    38821 gccgtattac ccgtcgtttt atgaaagatc cgcaagaggt aaaaattaag gcaaccgagc
    38881 gttcagcccc ggatattgaa caaagctact ggctggtaaa cggcttccgt aaaaacgatg
    38941 cgttattgcg tttcctagaa gtagaagaat ttgatgctgc tatcatcttt acccgcacca
    39001 aaaccggtac tattgatatt accgaattgt gtgaacgcaa cggctaccgt actgcggcat
    39061 taaacggcga tatgacccag caagcccgtg agcaaacctt agataaatta cgctccggtc
    39121 gtttagatat tttagtcgcc accgatgttg ctgcccgtgg tattgatatt gagcgaatca
    39181 gcttggttat taactacgat attccgttag aagaagaatc ttatgttcac cgcatcggac
    39241 gtaccggtcg tgccggtcgt tcaggtcgtg ccttactgtt tgttgagcct cgtgaacgcc
    39301 gcttattacg caatatcgaa aatttaatca aaaaaccaat taatgaagtg gcgattccaa
    39361 accacgaaat tttaatggaa aaacgccgtg agaaattcaa agcccgcatt tctaagcagt
    39421 tagaacatca cgatttagaa aaatatcgtg aattgttgga agatttattt actgcggatc
    39481 aagaccacga agaattagca gcggcgatga tgatgttact gcaagaaaaa caaaaactga
    39541 ttctgccacc ggatccggtt gtgcgtgctg cccgttctga acgtggacgt gaccgcaatg
    39601 agcgaaacga tcgtcgtaac ggtcgtgaac accgtgaaaa caatggtgtg gcaatggatt
    39661 tataccgcat tgaattgggg cgtgaagacg gtgtggaagt tcgtcatatt gttggagcga
    39721 ttgccaacga gggggatatc agcagccgtt acatcgggca tatcaaactt tatgataaat
    39781 actcaaccat tgagttgccg caaggaatgc caaatcatct cgtacaacat ttcgctcaca
    39841 aagcacgtgt attaagcaaa ccaatgcaga tgacattact tggctctgca aacagtgcaa
    39901 gtaatgcaaa tccatttgaa ggtcgtggtc gccgtggtaa cgatcgtaat gatcgtggtg
    39961 gtcgccgaga cgggggtttc aataaagacc gcaaaggtgg ctttaaagaa aaacgtttca
    40021 gtgaaaaacg tggtcgtcgt gactaaacga cactaagcga agtaagcgat gccccaccct
    40081 cgtggggcat tttacaagcg gtcaaaaaaa ctcaattttt tgcaactatg tttatcaaac
    40141 caaatcaaac ttcttgtcca cttcagatct ccgagcaaga catcgccttt atgcaatacg
    40201 cccttgatct cgctgattta gccgaagcaa aaggcgaaat cccggttggg gcagtactgg
    40261 ttgataaaaa ccaacagatt atcggcagag gctggaacca aaccattcaa ctctgtgatc
    40321 catctgcaca cgctgaaatg caggcaattc gtcaagcagg acaaacttta gggaattacc
    40381 gtctgttaga ttgtaccctt tatgttacgc tcgagccttg cccaatgtgt gccggtgcaa
    40441 ttttacatag tcggattaag cgattggttt ttggggcaag tgattataaa acaggtgcgg
    40501 taggttcacg ctatcatctg tttgaagatt ataaaatgaa ccatttctta gaagtgcatg
    40561 gcaatgtatt gggcagagaa tgtagccaaa agatcagtga tttttttaag caacgtcgtt
    40621 tgcagaagaa aggcgacgct ttgataaaat aaaagcatag ataggctttg ctactatgct
    40681 tttattcgat tattgaccaa ctgaagctaa aattcgatcg gcaaattttc cgatactgat
    40741 accaaggtta ttcgatttat tccaatccat taaagtacgg aaattattag aaactaaaaa
    40801 cgctcttccc gcttctttat ccggacgaat caaccaaacc tctttgccgt gtaattgagc
    40861 taattttgcc gattcttgtc cattcggata agctaaataa atacctaagg cttgccattc
    40921 cgccaatgtt ttcgctttgt tggtttcaag accggcgaaa cttaaatcca tcggtgaagc
    40981 taatttaacc tcaacacccc aaggtagttg attatcccaa cctactgttg aaagataatt
    41041 ggcaatcgag gcaaatgcat cggcttcatt ctcccaaata tcttttttac cgtcattatt
    41101 gccatcagct gcataggtta agtaagaagt tggcataaat tgagtttgtc ccatcgctcc
    41161 tgcccaagat ccaagcaatt catagcgttt aattgtgccg tcatcgagca ttttcatcgc
    41221 attcacaaat tcttgcgtaa ataacttctc acggcgacca tcaaaggcga gggttgccaa
    41281 caccgaaagt acatcaaaat ccccttggtt acgcccaaag ctgctctcca ttccccaaag
    41341 tgccaaaata tactcttttt gtaccccata tttttggctg gcatgggtaa gctggctatt
    41401 atattcatac caacgttcac ttgcctgatc caccttcgct tgagttaata ctttgtttaa
    41461 aacttggatt tggtggcgga ggcggtacat tcgggtcacg tcttcgtgca gcttgctgtt
    41521 gatctaactg caccgctctg gcgttgtaat gaatgaattt ctgagcattt aaggtttttg
    41581 cagacactcc tgcccctgct gccttctgtt tcagaaaatg cacataatca ttaaaatgac
    41641 tgaccgagcg agatttactg tatttagcat ctaagtttaa gccggcataa ctttcttgat
    41701 tatcacttga acaaccggct aaggctaaag tgataatcgc taaaggtaag gtaaaaatta
    41761 tcgatttcat tcttattccg ttaagttaat cattcggtta ggacgaatca cagtatcatt
    41821 ggtgatttct gccacaccga gaaattgttc atcttctgaa tataaacgta ccaaaccata
    41881 aagttggttc agattatcaa atctaattct ctgaccaaaa cccaccgctt tagtttgctc
    41941 tgaacttaaa tttatttttg ctaatgcaga aactgccgta tccatcggca ataagtgctg
    42001 gtctaactct gcaagcggtt gattttcggc taaattttgc aaatctgcat agctcatcat
    42061 tttttcaatc ggataatctg ccactgctgt acggcgtagc atcgtaacgt gtgcaccaca
    42121 gcccaactct tcgcctaaat catcgaccaa agttcggata taagtacctt tagaacaatg
    42181 cacctcaagg gttaaaaatg gagccttgta ttcaatgaaa tttagttcaa aaatcgtaat
    42241 cgggcgagcc tcacgctcca ccgtaatccc tgctcgggca tattcataca agggtttgcc
    42301 gttgtgtttt aaggccgaaa acattgtcgg cacttgcaaa atatcacctc taaatttctc
    42361 caaagcagcc aaaatttgag attttgtcac tgcaactgct ttggtttcca ccacttgccc
    42421 ttccgcatct gaagtatcgg ttcgctcgcc taattttgcg gtgacgagat aacgtttatc
    42481 cgaatccaac aaaaattgcg aaaatttggt cgcttcacct aaacagatcg gcagcattcc
    42541 ggttgcgaga gggtctaacg ccccggtatg tccggcttta tttgcttgga aaattcgctt
    42601 taccttttgc agaatatcgt ttgaagacat tccttgtggt ttatctaata agaaaacgcc
    42661 gtgaatatca cggccacgtt tgcgaggtct agacacaatt agtcctcttt atgtttttct
    42721 tcgtcatttt tgattacact agacacaagg ttagacatac gcataccttc gactagcgat
    42781 tcatcgtaga taaaacgcag ttcaggcaca atacgcaaac gcattgcttt acctaaaagg
    42841 gttcgaatat aggggcttgc tttctccaag ccttgcatac cttgcttaat agcttcagca
    42901 tcgttatcaa ataagaaagt cacaaaaatt ttggcatacg ccaaatctct tgatacttcc
    42961 acatcagaaa cagtcaccat accaatgcga ggatctttta cctcacgttg taaaatcacc
    43021 gccacttctt tttgtagctc ctgtgccaca cggtcactac gtttaaattc tctggacata
    43081 tttttctctt ttataggggc gtgatgcttc acgccctaaa aaatacaaag ggcgtatgca
    43141 atacgcccct acacaaaatt aggctaaata gtacgtttta cttcaaccac ttcaaacact
    43201 tcgatttggt cgccaacttt tacgtcgttg tagtttttaa cgccgatacc acattccata
    43261 ccgttacgca cctcagatac gtcatctttg aaacggcgga gagattctaa ctcgccttca
    43321 aaaattacta cgttatcacg cagaacacgg attgggttgt tacgtttaac gataccttct
    43381 gtcaccatac aaccggcaat cgccccaaat ttcgggtggc ggaacacatc gcgcacttct
    43441 gccaagccga taatttcttg tttgaattca ggctgtaaca taccgctcat tgctgctttc
    43501 acgtcattta atagctcata aatgatggag tagtaacgta aatcgatatt ttcgttttca
    43561 atcacacggc gggcagaggc atcggcacgc acgttaaagc cgaccataat agcattagaa
    43621 gctgcggcta aggttgcatc agtttcggta ataccaccta cacctgaacc aacaattttc
    43681 actttcacct catcggttga aagttccatt aaggattggc tgatcgcttc taccgagcct
    43741 tgtacgtctg ctttaacaat gatgttcaat tctgccacat caccggctgc catattactg
    43801 aacatatttt ccagtttagc tttttgctga cgagccagtt ttacttcacg gaatttacct
    43861 tggcgataaa gagccacttc tcgggctttc ttctcatcac gcacgacggt tgcctcatca
    43921 ccggcagcag gcacgcctga taagcctaat acttctaccg gaatagacgg acctgctgat
    43981 tcaacatctt taccgttttc atcacgcatt gcacgcacac gtccgtattc aaaaccacat
    44041 agaacaatgt cgcctttgtt tagcgtaccg gattgaacca agatagttgc cacagggcca
    44101 cgacctttat ctaagtaaga ttcgattacc acgccgcttg ccataccgtc ttttactgcg
    44161 gttaattcaa gcacttcgga ttgcagaata atggcttcta gtaaatcatc gatccccata
    44221 ccttttttcg cagataccgg cacgaattgc acatcgccac cgaatttctc agaaataacc
    44281 tcgtgttgta gtaactcttg ttctacacgg tcagggttcg cttccggttt atcaatttta
    44341 ttcaccgcta ccactaatgg cgcacccgct gctttggcgt gctggatagc ttcaatagtt
    44401 tgtggcatta caccgtcatc agccgcaacg acgagaacaa cgatgtcagt tgctttcgca
    44461 ccacgcgcac gcattgaggt aaaggctgca tgccccgggg tatctaagaa agtgatcatc
    44521 ttgccgtcat cggtttcaac gtggtatgca ccaatgtgct gggtaatacc acctgcttca
    44581 cctgccgcca ctttggcttt acgaatgtag tcaagtaacg aggttttacc gtggtcaacg
    44641 tggcccataa tagtcactac cggtgcacgg gttacttttt ctgcgtgagt atcacgatct
    44701 tctaaaaccg cttcttctaa ctcattttct ttacgcaaaa tcactttatg cccaagttct
    44761 tccgccacta attgtgcggt ttcttggtcg ataacttggt tgatcgtcac catttcaccc
    44821 attttcatca tcattttgat gatttcagtc gctttcactg ccattttatt agccaattca
    44881 gccacagtga tagtttcacc aatcaccaca tcagctttaa caacttgagc tggtttggta
    44941 aaggcttgtt gtaaagctgc acctttctta ccttgtttac ctttgccttt tacttcttta
    45001 tggttgcgac gatctgcact gcgttcgttt ttatcctctt cacgtccgcc ttttttcgct
    45061 ttagccacat tgcctttgcc gttacgacca cgatttccct cactacggcg gtcattatca
    45121 cgctcagcct ctctagcata agaagaagta aaacgctcat catcaaaatc ttcgttgccg
    45181 ttatcttccg cttcttcacg agcaatttct gctaaacggc gggcattttc tgcagcacgt
    45241 tttgcctcca tttccgcttt ttgctgagct aattcctctt gcttacggcg taactcagct
    45301 tcttctttgc gtttagcttc tttttcagga tcaaccgctt tctcttgttt tggctgtacc
    45361 tgttgtgctt tcggtttttc ttcttttgct ttgctgcttg gcattaccgg cacagaaatc
    45421 ggtttactag cggtcgattc tgctgctttt tttgcagctt tctctttagc ttcagcttcg
    45481 gctttttctt tggctaactt ttcagctgct tctttttcag ctctagcttt cgctgcggca
    45541 gcttcttttg ctgctttttc ttgcaatgct tttgcatcaa ttttcggttt tttctctttt
    45601 acttcaaccg cttttacttt accactggtt gtggttgtat tcactttact cgctttgcga
    45661 gcgccaccaa gcgaaagtgt ttttttctct tctgtcattt tattatcctc tttgcttagt
    45721 tgaaccaaca aatttggcgt gctgccataa ttagctcgcc agctttctct tctgaaagtt
    45781 cttcaatatc ggctaaatca tcaacacctt gctctgcaag ttcttcaaga gtcgtaatct
    45841 gtttttcagc taatttgaat gcgatatggc gatccatacc ttcaagcgtt aataattttt
    45901 cttcaatttg agctgatttt aataacttct cttcttctaa cgcttttttc gtgatcgcat
    45961 ttttggcacg agattgtaat tcttcgacta aatcttcatc ttctaaaccg tcaatcgccg
    46021 ttaaagtatc aaccggcaca taagcaatcg cttcaagaga cgtaaagccc tcttcaatta
    46081 aaacttgagc aaattcttca tcaatttcta aagcagaagt taataaattg atgactttac
    46141 catcttcttc ttcgctcttc ttcgttagct cttcaacggt cattacattt aatgcccaac
    46201 cagttaattg tgtcgccaaa cgcacgtttt gaccgttacg accgatagct tgagccagat
    46261 ttttcgcttc aaccgcaata tccattgagt gagtttcatc gttaatcaca atagagctta
    46321 catctgccgg agccattgca ttaatcacaa attgagccgg attttcgtcc caaagtacga
    46381 tatccacacg ctcgccgcct aattcattgc tgatagcttg aacacgagca ccacgcatac
    46441 ccacacaagc ccctaccggg tcaatacgtt tatcgtgggt tttcacggca atttttgcac
    46501 gagagccgac atcacgggct gaacctttga tctcaattac gccttcgcca atttcaggca
    46561 cttccaattt gaatagctct tctaacatca ccggtttagc acgggtaacg aaaagctgag
    46621 gtccttttga ttcaggcttg atttcgtata acacaccacg cacacggtca cccgggcgga
    46681 agttttcacg tgggatcata tcttcacgca caatgaccgc ttcgcctttg atatcttctg
    46741 atttaccttg taactcaagg aaaatattat cacgggttac ttttttcaca gtggcaagaa
    46801 taattttgcc taaatccgaa cggaattcat caatgatttt cgtcttctcc gcttcacgaa
    46861 ttttggtttt gactacctga ccaaaagtct gaatcgccac acgaccgaac tcgatagact
    46921 ctacttcatc ttcaataaaa tcgcctaatt gtacgtttgg atcttcaaat tgtgccgctt
    46981 ctaagctgat ttcacgggtc atattattca cattttcaac cacagcccaa cgacggaaag
    47041 tttggaaatc accggtttta cgatctacca ccacacgcac gtcaatatct aaatcacggc
    47101 tctttttggt tgcaatggtt aaagcggttt ctaaggcttc aaaaattgcc tcttttggta
    47161 attgcttttc gtttgaaact gcttccgcag ctaataaaat ctctttactc attttgtcag
    47221 tttaccttta tcttaaaaat taaaaaccgg aactaaattt gctttttgaa tattgccaaa
    47281 tgcgaactgg cgatcttcat tttctaccgt taaagtgatg aaatcacctt ctacttgttt
    47341 gattttacct tgccatttac ggcgatcgaa catcggaatg cgtaaatgaa tcactacatc
    47401 ttgcccgata aaacgctcat agtgggcaac ggtaaataat ggacgatcta accctggtga
    47461 agaaacctct aagttatatt tatcggcaat cggatcttcc acatcaaaaa tcgcactcac
    47521 ttggcggctg acatcgctac aatcatcaat cgtcacgcca ccttctttat caatatataa
    47581 acgcaccgtt aaaaaacggc ctgcacgttg gcattcaatg ccgactaatt caaagcctaa
    47641 tgcttcaata gaatcgagca ctaaatcttc taatttttgt tctaaagttg ccaagtcata
    47701 atctccaaat ataaaaaaag ccggataaac cagctttgat acgttaatgc tgtaccaatt
    47761 tccgcaaaaa agccccagac gggaaaccgt ggggctttaa gcggtttgtt ttttgctgta
    47821 gcaaccacaa caagcggtct tttttgccaa attttttgca aatttgctac agcatataaa
    47881 acaaaactca caactttaac caaagctgtg agcttaaaac tggttgcggg ggccggattt
    47941 gaaccaacga ccttcgggtt atgagcccga cgagctacca agctgctcca ccccgcgtct
    48001 gatggggtgc attatagcgg ttctacacaa aaacacaagc attttttaat attttcttgt
    48061 taattcctct tgatagaaca tttttaatcc atttttatca tttatatcgc tatagagcat
    48121 ttgataatag tagtcatacg ccagcacatt ttgtacatag cctctggttt cataaaacgg
    48181 gatactggca ataaattcat ccattgctaa ctgcccgtta ctacgtttca gccactgctc
    48241 aacacgccct gctcctgcat tataagcaga ggcaatcaga atccgattat tcggatattt
    48301 ttcgtttaac tccattaaat gggttgtgcc taacataata ttgttaaacg gttgaaagag
    48361 atcattgcca tctttgaagg ttaaaccgtt atctttagcg gttttttgtg ctgttgtcgg
    48421 taacagttgc attagccctc tcgcattagc gtgcgattga gcctgagcat tccacgcact
    48481 ttcttgacga gcaatcgcct gagcaaacgt tttgctgatt tttttatctt gcagatgtaa
    48541 atcgaaccaa tccgaatagg cattcggtaa tcgcaaatca agataatcaa aggcttttgt
    48601 ttgaattgta ccttccaccg ccaaatcata ccaattttta tccttggcat attttatcag
    48661 ggctaactgg attttagttg gtgtattttc acctgcttcc ggcttgatgt tttttatcca
    48721 gtcaatccat atttttcttg cctggtcaaa ctgccctagc tctcgcaact cttgaatacg
    48781 agctaattgg tttgcataca attcaagctg tgcttgtgtc aattcaggca cttcaagcat
    48841 cgggatttgg taaacaatgc ctaattgttg agcagccaac atagcataaa agcctctctc
    48901 tttagctaag ctttcaaaat caactttacg cttcgcttcg tttttctcct ctttcgcagc
    48961 ccaataacgc cattctgctt tttctttcgc ctgctgagat agcagaacca gccactcatt
    49021 taaatctgct ttttgccaaa ttgccattcg taaacggcgt tcagttaaat tgtctgtctt
    49081 gagcaacttg atttgctcat cacgccaaaa ttggaatgtt ggttctgggt tatcaaaaaa
    49141 tcgagtgata aaagcatttt tccagccatt gatttcctcg ctggaaagtt gatacttctc
    49201 tgcccacgtt tgatactgct ggaaactcgg gttctccata ttttccgata aagttcgcac
    49261 atatttagca aagagttgct gaataatcgc tttattatca gcataaaatg gggaatcaag
    49321 cggttgattt tcgataaaat tttgcaaatc tgccggatta ttcgctacct tttcaacgga
    49381 agatagccag attttcaaat tctcattatt tacatttgcc gccaaattcg ccaattctgc
    49441 atttgcattt tgtttaatta attcgaccgc tttcaaacgc attttttcat cggttttaag
    49501 cccctgatcc cgccaataac tttctaaatt cgcacaatca gaagttaatt tcggcgtagc
    49561 aagccaaaag cgatcaaact cttgcaccaa agcaagcagt tctgcatttt ctgctttttg
    49621 ctcagttact tgagaaactt ccggattgat ttgagcttta cttgctgcca gttcataacg
    49681 agcagaaaat aaacggcatt ggtcggcaag actactctgt tttacatttt gagcatattc
    49741 cagtaactcc ggaaatttct gttcacgata gagcagctca aacatcaagt tctgtaactg
    49801 cctttgatac aaagaatcag gatattttga aataaatgct ttaacttcac tttctgtggc
    49861 ttgttttaac gttattttag catttagcag cttccattca gctttcatct ccaacggata
    49921 acccgctaag gttagtaata aacgctgaat tatctgctcc gttgaaagtg ataaattctt
    49981 ctgactaatc gctgcatctg ccaaataatt aatttgctga aaattttctc tctgttttaa
    50041 acgcaaattt tctgcatact gtagctcttt ttgataaatc gctaaccaat cattttttaa
    50101 ttgttttaat tctgtttcag tataactttt tgatggttct ttcccggttc ctaccgcaaa
    50161 agcatattgg cttgctaaaa atacagcaat caacgttttc ttccacatta gtttttctcc
    50221 ttaatcgtga gttttaggca gaaaagtagg aatgaagttt caaataaaat gaagttattt
    50281 aaaaactgcc agctgataat tgtttaaaac tcaaccacct gccagtttca ctttgaaacc
    50341 tttctgttct aagatttgct taatgaatcc tcgattatcg ccctggattt caattactcc
    50401 atctttaaat gagccaccac aacccaattt acgtttaagc tctgaagcaa gagaatttaa
    50461 ggctttatcc tctaaatcaa gaccggtgat aaggcaaaca cctttcccct ttctaccgct
    50521 tgtttgacgt tgaatacgca caataccatc ccctttaggg cgttcttctt ttattacttc
    50581 ggactttatt ctgcctgttt ccgttgaata gactaatgtc atttacaaat ttttcctcaa
    50641 aaataaccgc ttgtttgatt aaaaaaggcg gaaatttttc cgccttcatt aaaaatgcaa
    50701 tgaattaact gatagattgg ttaatagatt ttaataccgc aagcggatct tgagcttggg
    50761 taataggacg accaataacc aaaaaatctg agcctgtttc tactgcttgt ttgggtgtca
    50821 tcactcggcg ttgatcccca aaatctgttc cttttggccg gattcctggg gtcactaatt
    50881 taaaatcttg accacaatgg gtacgtaata cctcaacttc ttgtggagaa cataccacgc
    50941 catctaaacc agcccgttgt gctaaatgtg ctaaacgaat aacttgttcc atcggcgaag
    51001 cattaatacc tatttgaagc aaatccaaat cttccatact ggttagaacc gtcactgcaa
    51061 ttaataatgg tgcctctttg ccataaggct ccaaaatttt ctttgcctct tccatcatgg
    51121 ctaaaccacc agaagcatgc aagtcaacca tccacacacc aagatcagca gcagaacgta
    51181 ctgctcgagc aaccgtattt ggaatatcat gatattttaa atcaaggaat acatcaaatt
    51241 tacgttcgtg taattgtttg acaaaatttg tgcctaaggt tgtaaacatt tctttgccta
    51301 cttttaaacg acaaagcgac ggatcgacca aatccacaaa ttctaatgct tcacgttcag
    51361 tttcatagtc taacgcaaca attactttat tgttcatttt caattcctca gattctttct
    51421 ttattgaata ataccttcga tactttgtac cggcttaatt ttttcccatt gattacaaga
    51481 aggacattgc cacattaagc gataactttg ataaccacaa tttaaacagc gatattggaa
    51541 gctgcgtttt atctgatttc ccaccatatt atgtaataaa actaagcttt ccttaccatt
    51601 tccttcctcc gcaaaatctg cttgatagcg aataaagcgg tgaaaagtaa ttaaattcgg
    51661 ataagtactc aactgctggt atagtttaga atgtgcagca ttgataccat ctttttcttc
    51721 aataaattca gttaaagcaa tatctacact actattatgt tttactcggt ttgctcgaat
    51781 gagaaataac tcatagccat ttaagtcctc aagagccata tagctttgct taattcgtcc
    51841 aagcacttcg ctaatataat cagggtcttg cacaagaatc tgttcgaaat agcttaatgc
    51901 tcttagatat tctccctctt ctaaatagaa atcacctaat attatagaag cgcgtgtgga
    51961 ttgaggataa tattctaacg ctttatttaa cgattcaata aatgccgctt tatcatcaaa
    52021 tttaacccct tgcgcatatt cacaataaaa atgtgaaagc ggtattttat ctgcatccgg
    52081 ctctattcga agccgttttt ctgtaacatt aatcgctttt ttccattctc tggttttttg
    52141 gtaaataaca gcaagctgag ataaagaata tttagcaaac tcaggttcat caactaatga
    52201 aatgtaataa ttttctgcac ggtcatagaa acctgcaacc ataaagtctt tagctaattg
    52261 ctgttttgct aataattttt gatcaaatga ataatgaggg ctattcacta atgtttggtg
    52321 aatacgtaag gcacgatcta cctcacctct tgaacggaaa agattaccta gggttaactc
    52381 cgcttcaaat tgggattcag atgcaatatg attttcggat tcttgttttt gtaacataga
    52441 gaggaaaagg tccaccgcct tttcctgctg attagataaa agaaaattta accccgtaac
    52501 atactcacga gagaacttat tactagcggt ttcttgatcc ttctttgcac tacgttgtcc
    52561 catataccag ccatatagtg ctgcaatagg caataaaagg aacaataatt caagcattga
    52621 ttattcagcc tttggagtcg ttaattcagt tatttgctga gcttggcgct ttacacgacg
    52681 atttaaagca acgttttgaa acttaatttt taagtaaaaa atacccgtta ccaaccaacc
    52741 aagaatcaat cctaagccaa ataaaatcgc aactaacgtt gataagcgta attcactctg
    52801 agcaaaaata tagttaaagg tgataagttg atcattattg gctccaatcg taacagcgac
    52861 aataataact gcaatcacaa ttaaaatacc taaaatatac ttaatcatat aatctcctta
    52921 ctacgattat tgaattaata agacttaaag cagatcaact ctctctttta gatctttacc
    52981 agctttaaaa tgtggtacat atttcgcgcc taaaagaaca ctttctcctg ttttgggatt
    53041 gcgacctaaa cgcggctgcc gataatgtag agaaaaacta ccaaatcctc ttacttctat
    53101 cctttcacct tcttctaaag tagccgttaa ctgctctaaa agctctttta cacaatgctc
    53161 cac
//
LOCUS       DANLXO010000005        49142 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.005, whole genome shotgun sequence.
ACCESSION   DANLXO010000005 DANLXO010000000
VERSION     DANLXO010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 49142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49142
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.005"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(47..1174)
                     /locus_tag="PXD69_000206"
     CDS             complement(47..1174)
                     /locus_tag="PXD69_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HDL6282449.1"
                     /translation="MADSVKSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGI
                     YAFTAKEQWTSKATVIAPKLTELGEYLNVRREYSRILRVDPVDPNALSASLFNNFNRL
                     AQSQDTKNEFFITSNVYKTLAEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRT
                     LSFSAETPMEAQDTLGKLVQFINSKAFAVELEDFLVDFQNVLTALQYEKSLIQEDLSV
                     NKSVQLENLNKAYETAQKAGIKEYSKAFNQSDASNIAAALSDTKISLSDSKLADSSYL
                     FMLGEKYLKAQIDVANEKGVVYPPRYYQIDYQLKQLEPLFEKTKTVKTQTFSYQASPD
                     YPVIKDKPKKVIILLIGAFIGLMISCLSIILTHYLLASKFK"
     gene            1323..1664
                     /gene="erpA"
                     /locus_tag="PXD69_000207"
     CDS             1323..1664
                     /gene="erpA"
                     /locus_tag="PXD69_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HDL6282450.1"
                     /translation="MSDIQIPLIFTDAAARKVKSLIEGEENPNLRLRVYITGGGCSGF
                     QYGFTFDDQVNEGDLTIENQSVGLVVDPMSLQYLIGGTVDYTEGLDGSRFVVNNPNAS
                     STCGCGSSFSI"
     gene            complement(1769..2092)
                     /gene="yidD"
                     /locus_tag="PXD69_000208"
     CDS             complement(1769..2092)
                     /gene="yidD"
                     /locus_tag="PXD69_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDL6282451.1"
                     /translation="MVKTHSPEQKAGTTESINQPPRLSLLAKILLLPIYFYRYAISPL
                     IGPRCRFYPTCSTYAVEAIKIHGAIKGGYLAFKRILRCNPLSEGGEDPVPLCCKGNCK
                     HNDKK"
     gene            complement(2041..2415)
                     /gene="rnpA"
                     /locus_tag="PXD69_000209"
     CDS             complement(2041..2415)
                     /gene="rnpA"
                     /locus_tag="PXD69_000209"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDL6282452.1"
                     /translation="MKKLNFSRELRLLAPVQFKAVFEEPLRASTPQMTLLARENNLEN
                     PRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHELPNFDFVFVAKGGIGKLDNATLF
                     ETLEKLWSRHIRLSKKPAQQNP"
     gene            complement(2451..2585)
                     /gene="rpmH"
                     /locus_tag="PXD69_000210"
     CDS             complement(2451..2585)
                     /gene="rpmH"
                     /locus_tag="PXD69_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDL6282453.1"
                     /translation="MKRTFQPSVLKRARTHGFRARMATKNGRQVLARRRAKGRKSLSA
                     "
     gene            2822..3784
                     /gene="hemH"
                     /locus_tag="PXD69_000211"
     CDS             2822..3784
                     /gene="hemH"
                     /locus_tag="PXD69_000211"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDL6282454.1"
                     /translation="MNQPQQIGILLANLGTPDEPTPSAVKRYLKQFLSDPRVIDLPKF
                     KWQAILNCIILPRRSPKVAKLYQSVWSEEGSPLLAISRQQQRAVQRYFDAKGKNVVVE
                     LGMSYGNPSIESATDNLIKQGVERIIVLPLYPQYSSTTTASVFDAFANGLKAQRKIVP
                     FDFIHSYHNDPLYIQALANSIDVKPDELLLFSFHGIPKRYETEGDFYAKHCQETAELV
                     AEKLGLPREKWYLSFQSRFGDEEWLQPYTDQTLESFPQKGIKKVAVVCPGFSADCLET
                     LEEITEENRENFEHAGGESYRYIPALNASGDHIKALVKLIEAKI"
     gene            complement(3848..4795)
                     /locus_tag="PXD69_000212"
     CDS             complement(3848..4795)
                     /locus_tag="PXD69_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL6282455.1"
                     /translation="MPTKPHKEYHELVELLISRGMLINDKSYAEKKLSQVGYYRLSGF
                     WHISRKPNQDGGLSENFLENVQFEEVYKLYIFDKKLRLLLLDIIERLEVNIRNIMAHE
                     LGRENPLAYEDYSLINQKFLKFQWKSNYAYANWLETTANKIKRSKDDSIEWHRKNEKE
                     IPFWVITETWDFGALSKFYSLLNGQHQRKIAKKFNVDENTLKNWLNEINIVRNLSAHH
                     SRIWNRKFSDIAIPKLDDPRWSKFKKMQQYFSNLSLDDKAKERIFGRVAILWFLVSQT
                     STNYHWLDKFEDLLNDFPNLPNTKVELMGFNREILEKIK"
     gene            complement(5007..7124)
                     /gene="spoT"
                     /locus_tag="PXD69_000213"
     CDS             complement(5007..7124)
                     /gene="spoT"
                     /locus_tag="PXD69_000213"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HDL6282456.1"
                     /translation="MYLFEPLDRIIQGYLPPEQIERVKRAYVIARDAHEGQTRSSGEP
                     YITHPVAVASIIAEMKLDQEAVIAALLHDVIEDTPYTEEELAAEFGQSVADIVQGVSK
                     LDKLKFRTRQEAEVANFRKMILAMTKDIRVVLIKLADRTHNMRTLGALRPDKRRRIAK
                     ETLEIYSPLAHRLGIEHIKNELEDLGFEAMHPQRYRVLKMAIASARGHRKELIQRIAD
                     DIRGRLEEVQIEARVYGREKHLYSIYQKMRQKDQHFHSILDIYAFRVVVDNVDNCYRV
                     LGQMHALYKPRPKRVKDYIAVPKPNGYQSLHTSMIGPHGVPVEVQIRTEDMDKMADMG
                     VTAHWRYKEGESHHNTTVQLKAQQWLQSIVELQNSAGNTAEFIDSVKSDLFSDDIFVF
                     TPKGRIVELPANATAIDFAYAVHSGIGDRCVGAMVDRNPYPLSEPLRTGQTVEIITEQ
                     GKRPNASWLNFVVSGKARAKIRQSLKNQQHDEAIALGRRQLVRAMNLRSLDELCSETI
                     QSVLDELRLSSFDELLAEIGLGNQMSNVIAQRLLGEPLLIDTDGNPENNQPLKIEGIE
                     NRLISFANCCLPIPGDEIIAHVSSGKGLAIHNACCGNVKDYATEPSNYLPVEWEIAKE
                     KAIQFETEIVLDIINEPGVLAGITSTLAKLNSNIGSINSEAREGNIYQVRVQISVENK
                     EHSELILRKLLSVKGVVKAARKQ"
     gene            complement(7234..7515)
                     /gene="rpoZ"
                     /locus_tag="PXD69_000214"
     CDS             complement(7234..7515)
                     /gene="rpoZ"
                     /locus_tag="PXD69_000214"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDL6282457.1"
                     /translation="MARVTVQEAAEKIGNRFDLILIAARRARQLQLHTREPLVPEEND
                     KPTVIALREIEEGLITTDIMDQLENHDSIKQEAAEQEAISFLTEMSNEA"
     gene            complement(7618..8115)
                     /locus_tag="PXD69_000215"
     CDS             complement(7618..8115)
                     /locus_tag="PXD69_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDL6282458.1"
                     /translation="MAHFYEYLEFNSDEDRENQLEVYVEVKLSTDTEEKLQAVGVQGD
                     WLVMAEPYCPDCVEIVAYFQRMAKLNPNIKVKYVARKDNQERKHFDSDEQQQAVISAQ
                     KIPTIFDIRNGKTELVLSEFPQFLKDKMAANPEQFEQLKADFRMGKFGKEVEAELLAI
                     LLNTK"
     gene            complement(8140..9162)
                     /locus_tag="PXD69_000216"
     CDS             complement(8140..9162)
                     /locus_tag="PXD69_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6282459.1"
                     /translation="MSVTKKRLTLSDIAELSGVSKTTVSMILNGRGNDFRIKSETCQK
                     VKEIAKKHGYRANVYAKSLQAQRTNVIGLVIPDLTNYGFALTSRTLEKLCRENGLQLV
                     IACSDDTFEGEKKAIERLLDRQVDLLITAPTHNEPTYYQNAAQYTPMLQLDRYISGLN
                     IPSITSNDTQSISMLVENIVRAYHLKEFFYLGGQLSLSPSQNRLKGFREGLEQSHLAL
                     DENWVLHQDYQPESGYQMFAQIVEKLGRLPEAVFTASFTLLEGVMRYLTEHQQMDKLL
                     TQELHLATFDDHHLLNALPFHIHSIKQDHQQIAERTFELIQQKLAQQKIDDVKVDCEI
                     LWRKSI"
     gene            complement(9202..10632)
                     /locus_tag="PXD69_000217"
     CDS             complement(9202..10632)
                     /locus_tag="PXD69_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HDL6282460.1"
                     /translation="MHIFNNGKYKSLHAQSEGELNALRQTVLSDPDFYPTYHLAPETG
                     LFNDPNGLIFDGEKYHIFAQWFPYGALHGMKHWQHFITTDFQTFSKGDLLIPDELFES
                     HGCYSGGAILWQDKIVAFYTGNTRRPSDNARIPHQNIAIFDKSGKLLEKRCIIDQAPA
                     GYTEHVRDPKPYLTAEGKIRFVLGAQRENLTGTALIYEMDDLNATPRLIAELEVHNFD
                     NSNVFMWECPDLFSLGGKDLFVWSPQGKLRESHQFQNNYHATYALGELNGNRLRAEHI
                     EELDYGFDFYAPQTVENSDRILFGWVGLPDLTYPTDKYQWHSMLTLPRKLSLQNGKVI
                     QNPIVNVGELQAVEMSENFAIENLDTAYLQISVENQPLVLDFFSNEQGQKLSLRFENG
                     VLSLDRSQTEQTELMEKFGSVRHCKIEQLETIEIFFDRSVVEIFVNGGEKVLTSRFFI
                     AKRENVVKSSRPIQVKVAKVLPISVE"
     gene            complement(10737..11660)
                     /locus_tag="PXD69_000218"
     CDS             complement(10737..11660)
                     /locus_tag="PXD69_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoimidazole riboside kinase"
                     /protein_id="HDL6282461.1"
                     /translation="MSKIWVTGDAVVDLIPDGEHHYLKCAGGAPANVAVGVSRLGVEA
                     GFIGRVGNDPLGKFMREVLQAENVCTKQMILDAQHRTSTVIVGLDNGERSFTFMVNPS
                     ADQFLEIGDLPEFNQGDFLHCCSIALINDPSRSTTIEGIRRVKKAGGYVSFDPNLRES
                     LWKSLDEMKTVVNSVVAMADILKFSEEELTLLTETETLEQATQAITAQYPEKLIIITL
                     GKDGAIYHFNGKSQVVAGKALKPVDTTGAGDAFVSGLLAGLAQTPNWHDETVLVEVIR
                     KANASGALATTAKGAMSALPNKAELDAFLAE"
     gene            complement(11777..13204)
                     /gene="miaB"
                     /locus_tag="PXD69_000219"
     CDS             complement(11777..13204)
                     /gene="miaB"
                     /locus_tag="PXD69_000219"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDL6282462.1"
                     /translation="MAKLHITTWGCQMNEYDSSKMADLLNSTHGFELTENPEDADVLL
                     LNTCSIREKAQEKVFSQLGRWKNWKKDKPNLIIGVGGCVASQEGEHIRDRAPYVDIVF
                     GPQTLHRLPEMINQIRGGKSSIVDISFPEIEKFDRLPEPKAEGPTAFVSIMEGCNKYC
                     SFCVVPYTRGEEVSRPVDDVLFEIAQLAAQGVREVNLLGQNVNAYRGETFDGGICTFA
                     ELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSFLHLPIQSGSDRVLTMM
                     KRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMKVIEQVNFDMSFS
                     FIYSARPGTPAADLPDNVSDDEKKERLSRLQQRINHQAMQFSRAMLGTEQRILVEGPS
                     KKDLMELTGRTETNRVVNFVGTPDMIGKFVDVKITDVYTNSLRGEVIRTEDQMGLRVV
                     ESAESVIARTRKEDDLGVGKYVVNL"
     gene            complement(13421..13921)
                     /gene="crr"
                     /locus_tag="PXD69_000220"
     CDS             complement(13421..13921)
                     /gene="crr"
                     /locus_tag="PXD69_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005702996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDL6282463.1"
                     /translation="MGLFDKLFGSKQKESQEIKIYAPLTGEIVNIEDVPDVVFSEKIV
                     GDGVAIRPSGDTIVAPVNGTIGKIFETNHAFSIESEEGVELFVHFGIDTVELKGEGFT
                     RLAQEGQTVKVGEPIIKFDLALLEGKAKSVLTPIVISNMDEISNLSKLNGQVVAGESV
                     VLTLTK"
     gene            complement(14006..15727)
                     /gene="ptsI"
                     /locus_tag="PXD69_000221"
     CDS             complement(14006..15727)
                     /gene="ptsI"
                     /locus_tag="PXD69_000221"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HDL6282464.1"
                     /translation="MITGIAASPGAVFGKALVLKEEPIVLNTRKITESEVEAEKAKFF
                     TGREKAAAQLTAIKEKARRTLGEEKEAIFEGHLMILEDEELEEEILSYLTDNLVTADV
                     AASKVIEMQASMLAEIDDEYLKERAGDIRDIGNRLVRNILNMNIVDLGDIQDEVILVA
                     YDLTPSETAQLNLDKVLGFITDVGGRTSHTSIMARSLELPAIVGTNNVTSLVKTGDFL
                     ILDAVNNEVHLNPSEEKIANFKALQEKLNAEKEELAKLKELPAQTLDGHKVDVAGNIG
                     TIRDVEGVLRNGGEAVGLYRTEFLFMDRTQLPGEEEQFQAYKEIVEAMNGQMVILRTM
                     DIGGDKELPYLDLPKEMNPFLGWRAVRIGFTRREILDTQLRAVLRASAFGNLAVMFPM
                     IISVEEIRLLKSIVAELKDQLRAEGHAFDENLKLGIMVETPSAAVNARHLAKEADFFS
                     IGTNDLTQYTLAVDRGNEIIAHLYNPLSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     VRATALLLGMGLDEFSMSGISVPHVKKLIRSINFADAKALADEALAQPTAADIERLVD
                     EFYQKLN"
     gene            complement(15849..16106)
                     /gene="ptsH"
                     /locus_tag="PXD69_000222"
     CDS             complement(15849..16106)
                     /gene="ptsH"
                     /locus_tag="PXD69_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HDL6282465.1"
                     /translation="MYSKDVVITAPNGLHTRPAAEFVKAAKGFASDITVTSGGKSASA
                     KSLFKLQTLGLTQGTTITISADGEDEQKAVDFLVDLIPTLE"
     gene            16367..17941
                     /gene="thiP"
                     /locus_tag="PXD69_000223"
     CDS             16367..17941
                     /gene="thiP"
                     /locus_tag="PXD69_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease"
                     /protein_id="HDL6282466.1"
                     /translation="MLSTLTKTTAWFIYFSIIALYVFSLWALMDYHQNDTLFVFSDIT
                     ATVAYSLLQASLSAVISLFLGSLLARSFFYLDFKGKNLLYKTISFIWALPSLVIIFAV
                     IGVFGNSGWLAKLFQQLGWNWQFNLYGLHGIILAHCLFNIPFVMKYYTGGLQLTPSSR
                     FQLAAQLNLTGWNYIQIVELPIIKTLLPYMFMTVFLVCFTSFPIVLMLGGSPKYSTLE
                     VAIYQAVTFEFDFAKALILIRVQFVVGIGLQLVMNYISTSALKKLKQQPNRVEIWKPK
                     PTGLAKLGLQAVIFLQSFAIILPLVSVIWAGLSVSKLSERLLNPTLWQATQYSLYLSL
                     IASIFVITISYLIALEARQLLYTKAKLRYSILTAITLFPLLLPIFLLSVGLFILLMNS
                     ELSSEALLLLVGICNGLTLLPFIYPMLFSAMWNSLTSHDKLAQGLGLKGLRRWWIVEK
                     NQLIRPLVTVFALAMSSSLGSFTVIAFFGNADFSSLPYLLYQQLGSYRTEDAAVTALI
                     LMLFALLPFLFSKDKL"
     gene            17938..18588
                     /gene="thiQ"
                     /locus_tag="PXD69_000224"
     CDS             17938..18588
                     /gene="thiQ"
                     /locus_tag="PXD69_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein"
                     /protein_id="HDL6282467.1"
                     /translation="MIELDLHFTYEQMNMHFQLSVKKGERIAVVGESGAGKSTLLNLI
                     AGFEKAESQQSQLWLNQKNHLDTEVAQRPVSMLFQDNNIFPHLTVEQNIGLALVPSLS
                     LNPKQKAQVKQIATQMGIETFLQRQADQLSGGQKQRVALARTLLRDKPILLLDEPFSA
                     LDPQRRAELQQIVFDICQSRNLTLLMVTHQLSESLFLFNRVITVADGEIVSDLSPL"
     gene            18895..20309
                     /locus_tag="PXD69_000225"
                     /pseudo
     CDS             18895..20309
                     /locus_tag="PXD69_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605131.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
     gene            complement(20425..21228)
                     /gene="map"
                     /locus_tag="PXD69_000226"
     CDS             complement(20425..21228)
                     /gene="map"
                     /locus_tag="PXD69_000226"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDL6282468.1"
                     /translation="MNNIPLRNEEEIQKLRVACKLASDVLVMIAPYVKEGVTTGELDK
                     ICHEYILANGATSASLGYHGFPKSVCISLNEVVCHGIPSDDKKLKKGDILNIDVTVIK
                     DGYYGDNSMMYVVGEPSVRDKRLMAVTLESLYVGIRTVKAGVRLKEIGTAIQKYVEKE
                     GFSVVREYCGHGIGTEFHCDPQVVHYATDDGGVVLKEGMVFTIEPMVNAGKKEVRLMG
                     DGWTVKTKDRSHSAQYEHQIVVTKDGCEVLTIRDEEIAEGRISRIMHNS"
     gene            complement(21314..21979)
                     /locus_tag="PXD69_000227"
     CDS             complement(21314..21979)
                     /locus_tag="PXD69_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HDL6282469.1"
                     /translation="MNFTTYFSDENKRRSLILLSLFHIFIIAISNYLVQISFEVQVPL
                     TEFSFPTTWGTLTFPFIFLATDLTVRVFGADLARKIIFVVMFPALVISYVISVLFFET
                     QFQGFSALTEFNFFVFRIALASFAAYLVGQLLDVLVFNSLRQGKRWWLAPTCSTIFGT
                     LIDTFVFFAIAFYKSSDEYMAEHWFTIGSVDYAFKLFVSLLLFLPLYGVILNFIMKKL
                     DLK"
     gene            22172..22861
                     /locus_tag="PXD69_000228"
     CDS             22172..22861
                     /locus_tag="PXD69_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDL6282470.1"
                     /translation="MLQLRKANERGDGSFSWLKSYHTFSFANYYDLKHIHFSHLRVIN
                     EDFIAPNHGFGKHPHDNMEILTYMLKGRVAHEDSMGNKTEVKAGEFQIMSAGTGVFHS
                     EINPDPNETLHLYQIWIIPNQKDVTPRYNQDRFAPKEGATLILSPNAEEGSFKIYQDM
                     KLWRYQYPTAKSEQLALEPNRSYWLQVVKGNLNINGVELSTSDALGIRQEKALEINTQ
                     DDVEFLLFDLV"
     gene            complement(22929..23720)
                     /locus_tag="PXD69_000229"
     CDS             complement(22929..23720)
                     /locus_tag="PXD69_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL6282471.1"
                     /translation="MNNLRIKMISPEIALAKYNELDVLEINHSKVKAKIALQGAQLLS
                     WQPKNTQQDVLWLSEIEPFQTGVAIRGGIPICHPWFGTDKKPAHGTARIQAWNLLEHT
                     SSADGIRVVLGLENQAKLEMILGEVCELYFTHLAPEPAQAALHTYFQVGDITKTEVQG
                     LATQCFDKLTNQEIEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETV
                     LWNPWHNTVSAMTETAYQNMVCVETARINTLLQQNETLGVRILVR"
     gene            23844..24848
                     /gene="fbp"
                     /locus_tag="PXD69_000230"
     CDS             23844..24848
                     /gene="fbp"
                     /locus_tag="PXD69_000230"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDL6282472.1"
                     /translation="MKTLGEFIIEKQAEYPGAKGELSGILSSIRLAAKIIHREINRAG
                     LSQDILGTAGSENVQGEAQMKLDVFANETMKKALLAREDVAGFASEEDDNFVAFDNER
                     GRNAKYILMTDPLDGSSNIEVNVSVGTIFSIYRRVSPIGTPVTQEDFLQEGRKQVAAG
                     YVTYGSSTMLVYTTGNGVNGFTYDPSLGLFILSHPDLKTPTEGKYYSINEGQYVTFPQ
                     GVKRFIKYCQETDEAIKRPYSSRYIGSLVSDFHRNLLKGGIYIYPTSTVYPKGKLRLL
                     YECNPIAFLAEQAGGMATDGINPILDIKPTELHQRVPFFVGSTSMVKQAGEFMQEFAK
                     "
     gene            25032..29543
                     /locus_tag="PXD69_000231"
     CDS             25032..29543
                     /locus_tag="PXD69_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6282473.1"
                     /translation="MINKNFPLSYLASFVAFAVSLSATASVFRDDIDLQYYRDFAENK
                     GKFTVGASNIEIKDKSGNTLDALFPNVPMPDFSAANRNLGIATLVAPQYLVSVAHNTQ
                     YNTVEFGAPGTNADAHHYTYKVVDRNDYGIVEGGQHQDYQVPRLNKLVTEVAPATVTD
                     LGNNASAYQDSSRFTHFARLGSGRQIVKNTEHKDNQISTSYQYLTGGVHLPIAVHNSD
                     YWLDFRGNALNNSPYGALTAFGTRGDSGSGVYGYDQKTKRWLLLATYTFGTPANNYYN
                     RAGIIRQDYHDKQFAEDIAGTLTNAQQNAVFEWSAQGKDSSIGNKGKNLTVSLADRSI
                     KDNSASPLGYGGTPQLQLPQDNTGKTLNIEGQDSTIVLKTDIDQGAGALNFNANATVR
                     PENDQSWVGAGIVVAKGKQVNWQVKNPQGDRLSKLGEGTLHINGKGENLGDISVGQGT
                     VILTQQAGENGKKSAFNQVGIVSGRSTVVLNSADQVDPNKIYFGFRGGRLDLNGNNIA
                     FNRIQNSDDGARIVNNHLQKAATLTINGPKPPEATDLKWGTWKENSADIYEYINPHAN
                     NRTDYFTLKGNPNQYMPTNGASNAHWTFLSSNKDAAVKQVLAQKGLEHRYNSFNGFIG
                     ETDNTQHNGRLNVVYDPKASTPPATASEVTWGKGLVAGADIYLFTNPKTKIREYFALK
                     GDPKQPVPRGGLSSEHWEFLAADRNQAINKVLARKNAPIEQEKLNSIYTFSGGLNLNG
                     DLTVKGGKVLLSGRPTPHAYDAINKQDVVYADDWQNRQFKADNMQLNQYAQLYVGRNV
                     SNLQANLSANDHAQLHLGFINEQTPSCYYSEYTGKTSCDTQAVVSNEIFATLPTTQIN
                     GDVSLAEQSQLHIGKANLIGTIQAAATTSIRLANQASWTNTGDSRTGNLVAENGSTIN
                     LNEKFVTGEIPTRFNTLIIDGNFQGNAKINYLTDIAAGKGDHLQVNGLAEGTFTLALR
                     NSGKEAEVVSPLSLLTLTHQAQADKAKVSLENGYVDLGAYRYVLANRSNGYRLYNPLK
                     DAKDRNQSIATAKAELDHAIAEADKQKQEISRLNAEAEKERQAEKNAKQAAANAQSQL
                     SQANSELTRLQQYADYYRRYYPTYYRQIQGQITVAKQKVTQASAALTTAENNAKASAA
                     QIANVEQAVETAQNIAKQVEAKLATLRITAGNSEAILNAEALKLCQENGANCEHLQAH
                     ADTDSSNIQQSDWVSQYANTALSELSAQANSALQIGQDLDRQLFAKHDKFHVWSSIEH
                     QKTEHQSDLYRPYEQQTNLTQLGIELPLANGINAGVMLSRNHANAEFDEGVNGKSNLL
                     MASLYGKWHSENGTFVSLDGSYGKAKNRIDLFGENRFNRHIMAIGANLGHNFDLAGVQ
                     VQPAVGTRYYRFSAQNYKLGEVEVRSPKAHFMAYQAGVKVSKAFDLSSWKVEPSLAAH
                     YVDASSKRLSVAVNDNTFSQRFGRYLKTEVGVGVTKGQWQLSSHLGLLKGNEIGKQHF
                     AGFKLGYSW"
     gene            complement(29598..30707)
                     /gene="mobA"
                     /locus_tag="PXD69_000232"
     CDS             complement(29598..30707)
                     /gene="mobA"
                     /locus_tag="PXD69_000232"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL6282474.1"
                     /translation="MEEKISAVILAGGLARRMNGAEKGLQLLDQKPLISHLLARLSPQ
                     IEDIWLNINRSVEQYQQLYPELPYYQDSLPDFQGPLSGMLSGFEQIESDYLLFVPCDT
                     PFIPTQLLHKLHTALRINQAQIAYAHDGDRPHPTVALVHRSVAENLRAYLASGERRLL
                     WFFQTQKSVAVDFSAYKAAFRNFNCLEDLTAFNPYPIKTLAITGYSGTGKTTLLEKLI
                     PKLTACGIRVGLIKHSHHNVDIDKKGKDSYRLREAGANPTMVVCDERWALMTETKQAA
                     ETKQAVEFSQLIAKFDPETVDLVLVEGFKHETMPKIQLHRKEIEKPLPALDQWTIATA
                     TDYPLERENRLDINDVEQLADFIRQWLEASKEPAN"
     gene            30799..31068
                     /locus_tag="PXD69_000233"
     CDS             30799..31068
                     /locus_tag="PXD69_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HDL6282475.1"
                     /translation="MKCKRLEELLELLGEHWRKNPDLHLIDILQQLSVEVSEPDNFHA
                     LRDEVLIYQLKMRNADKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            31112..31750
                     /locus_tag="PXD69_000234"
     CDS             31112..31750
                     /locus_tag="PXD69_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL6282476.1"
                     /translation="MKKFALKTVLVALSALFAFNATAVAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELNYKIPSQIKAKLPADSKLVQYHVNFLGRQSENLTRAWAL
                     AMALGAEDKVKTALFEAAQKDAFKSMDDIRAVFIANSISAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFSDSSSTNDFIQRYIDAVVFLSKK"
     gene            31770..32222
                     /locus_tag="PXD69_000235"
     CDS             31770..32222
                     /locus_tag="PXD69_000235"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HDL6282477.1"
                     /translation="MVLQVLNSKAIQPFLYANSENKMTNLSILNLVPIREGQTAKQAV
                     DSMVKLAKHAENIGIERYWIAEHHNMKNLASSTTQLLIQHALSHTEKLRVGSGGVMLP
                     NHSPYIVAEQYGTLETLYPNRVELGLGRAPGTDMRTASALRPEFAFPR"
     gene            32206..32868
                     /locus_tag="PXD69_000236"
     CDS             32206..32868
                     /locus_tag="PXD69_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL6282478.1"
                     /translation="MPFPDEISELKGYFDGTNPVSAYPAQGLNVPFYILGSSPESAYL
                     AAERGLPYAFASHFAPRFMDDAIRIYRSHFKPSDVLDKPYVILGVNAIVAETDEEATQ
                     LATTQTQFFLNVVTNAQQNLQPPLESDDKVWENFVKAEIVPHFGPVAFEQNALYRQEK
                     TVVRQMTECSLIGSPQSVEQQLKALKARVEIDEIMAVNYIFDEQKQHQSYTWLKQITD
                     KV"
     gene            32870..33163
                     /locus_tag="PXD69_000237"
     CDS             32870..33163
                     /locus_tag="PXD69_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL6282479.1"
                     /translation="MSKTMQQKAAEAHNMCRLKGDSMLDNADRQIAFEAVYESEELAQ
                     QAVEFFAQKAKSVETEPCEIQSEITQIAEGFLMKMWITFSCQAEVILFQMAVR"
     gene            complement(33232..34566)
                     /gene="srmB"
                     /locus_tag="PXD69_000238"
     CDS             complement(33232..34566)
                     /gene="srmB"
                     /locus_tag="PXD69_000238"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HDL6282480.1"
                     /translation="MTQLMTFEELDLSPQLLKALAHKGYNRPTAIQQATIPAALEGRD
                     LLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAQALAK
                     FTQLSIATITGGVAYQNHGEVFNKNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEA
                     DRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLEDFAERLLNDPIKVDAEPSRR
                     ERKKIQQWYYHADNVEHKTKLLARIISEFSVERAIVFVRRREDVRELSETLRKRGIRS
                     TYLEGEMAQTQRNQAINRLKEGVVNVLVATDVAARGIDIDDIDFVLNYDLPYSADTYL
                     HRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEEVLKPRIIEGLEPRTKAPKDGEL
                     NVTSKKEKARIKKKKEAKKEAAKPKVKVRHKDTKNIGKRRKPSSESAAVKQA"
     gene            34726..34989
                     /locus_tag="PXD69_000239"
     CDS             34726..34989
                     /locus_tag="PXD69_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxA family glutaredoxin"
                     /protein_id="HDL6282481.1"
                     /translation="MFVEIYGRLSCPYCVRAKTLAEKMKQELSDFDFKFIDMIAENIS
                     KQDLEPRVGKPVATVPQIFVDNNHVGGCTDFQAFVEEKFGITV"
     gene            complement(35037..35135)
                     /locus_tag="PXD69_000240"
     CDS             complement(35037..35135)
                     /locus_tag="PXD69_000240"
                     /inference="COORDINATES: protein motif:HMM:NF028261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HDL6282482.1"
                     /translation="MSSAAIITMVVAMTIIWGGLLFAIKRLPKEEQ"
     gene            complement(35135..36643)
                     /locus_tag="PXD69_000241"
     CDS             complement(35135..36643)
                     /locus_tag="PXD69_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL6282483.1"
                     /translation="MSNQSSNAPQRETFSGRGAFIMAAIGSAVGLGNIWRFPYTTYEN
                     GGGAFILPYIIALLTAGLPLLFLDYSIGHKYRGGAPLAFRRFSSKFETFGWWQVLINV
                     IIGIYYAVVLGWAASYTYFSFSGAWGDKPVDFFIGEFLKMGDITQGVSFEFVGMVTGP
                     LIAVWLIAIAVLAMGIKKGISAASNLLMPQLIVMFLVLVGYSLTLPGAAKGLDALFTP
                     NWEKLADPSVWIAAYGQIFFSLSICFGIMITYASYLKKETDLTGSGLVVGFANSGFEL
                     LAGIGVFAALGFMATAAGQEVNEVAKGGIGLAFFAFPTIINQAPMGALVGVLFFGSLT
                     FAALTSFISVIEVIISAVQDKLNSGRVKATLLVGIPMMVVSVLLFGTTTGLPMLDVMD
                     KFVNQFGIVAVAFVSLIAIVTSEKLSTLEKHLNEVSSFKVGFIWRLCIVITSGVLAFM
                     LFSEIAKVYREGYEGYPSWFVNTFGWGMAIGLVVVAYLLSKMAWKNEPKGDE"
     gene            complement(36972..38261)
                     /locus_tag="PXD69_000242"
     CDS             complement(36972..38261)
                     /locus_tag="PXD69_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDL6282484.1"
                     /translation="MDSIPLSSLFITLAILLVLSAFFSGSETGLMSLNRYKMRHLAEQ
                     GHKGAKLAEKLLARTDVLLSLILICNNLVNIAASAIATMIGMQLSGEAGVAIATGLLT
                     FVMLVFSEILPKTVAAIYPEKVGFFASFVLTPLKKLLSPIVFLMNLIIAGLMKLLRIQ
                     QKDKQGLSSEELRSVVLDAGKFIPAEHREMLVSILDMEKVTVDDIMVPRNDISGIDID
                     DDWKAIMRQLNHAPHARVIIYKGDMDNNIVGILRVREAFRLMLEKNEFTKEMLLRATD
                     EVYFIPEGTPLTTQLMNFKANKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSSAP
                     TLEQEVQQQSDGTVIIEGSANLRDLNKLFDWDLPLEEARTFNGLILEHLEKIPDEGME
                     FELYNLKVMILEVSENMVKQAKVEHLSPKIEKEQDSA"
     gene            complement(38385..39182)
                     /gene="ccsA"
                     /locus_tag="PXD69_000243"
     CDS             complement(38385..39182)
                     /gene="ccsA"
                     /locus_tag="PXD69_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDL6282485.1"
                     /translation="MLLPLLSIVAYALALLWVAPTLVNLENAATVNKKPNMMLVFGFG
                     LLATILHFSVLYNELFLIEGQNFTVTNVISLMSFIMAACVTLALLKWKTVWFPLIIVY
                     SFAICSVGVAGFVKGSFIRNVQENAGLLFHLGIALFSYALFFLALIYAFQLKWLDRKL
                     KSKTMFFCQILPPLMTVERHFFTLTLAAQAMLTLTLFSGVVYLHNFFEPEHIHKAIFS
                     FLAWLVYSIQLLGQWKLHWRGKRVLIYSISGMMLLTIGYFGSRLIVN"
     gene            39398..39922
                     /gene="yceD"
                     /locus_tag="PXD69_000244"
     CDS             39398..39922
                     /gene="yceD"
                     /locus_tag="PXD69_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HDL6282486.1"
                     /translation="MQKVKLPLTIDPYKDAQRRVDYEGYISGKLLTRLGESVCNVQSD
                     AQVTLSLYVDPQRLTVIKGTAKVDVEFDCQRCGDPFTQTLDCSFVFSPVSNMDQADIL
                     PEIYEPIEVNEFGEVNLLDMIEDEFILELPLVPMHSEEHCEVSVSEQVFGELPEELVQ
                     KPNPFAVLANLKKN"
     gene            39939..40109
                     /gene="rpmF"
                     /locus_tag="PXD69_000245"
     CDS             39939..40109
                     /gene="rpmF"
                     /locus_tag="PXD69_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006231206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDL6282487.1"
                     /translation="MAVQQNKKSRSRRDMRRSHDALTTAAVSVDKTSGETHFRHHVTA
                     DGYYRGRKVINK"
     gene            40128..41150
                     /gene="plsX"
                     /locus_tag="PXD69_000246"
     CDS             40128..41150
                     /gene="plsX"
                     /locus_tag="PXD69_000246"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDL6282488.1"
                     /translation="MVDITLAVDVMGGDFGPRVTIPALEKALKQNPSLSFLLFGDEHQ
                     IAPLLQKHTLLNHPKIQIHHTEQVIEADVPFTTAIRQSKNSSMRLAIEAVKEGKAQGC
                     VSGGNTGALMGLAKLLIEPLPNIERPALTSLIPTLNGKSSVMLDLGANIEVSNHQLQQ
                     FAEMGNLFAQVMLDLVYPRLSLLNIGTEENKGTAQLQAVHQLLKNRQDLNYTGFIESD
                     KLTSYLTDVIICDGYTGNIALKALEGAAKNIISLFKKEKADSNICRNTKRYLLKAMFY
                     RYYRKLQQINPDRHNGATLLGLSKVVVKSHGGANINAFYYAIDYAVQQIQGDIPNKIL
                     EGLTQK"
     gene            complement(41247..42530)
                     /gene="hisD"
                     /locus_tag="PXD69_000247"
     CDS             complement(41247..42530)
                     /gene="hisD"
                     /locus_tag="PXD69_000247"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDL6282489.1"
                     /translation="MQTLIWNNLTETEQQQYLARPAQVVGESIKAAVNEIKANVIANG
                     DKALFELAEKFDKVKLESLVVSEQQIQQAQSRISPELKQAIQNAKANIEAFHKAQQNQ
                     EVDIETQPGVCCQVITRPINAVGLYIPGGSAPLFSTVLMLAVPAKIAGCNKIVLCSPP
                     PIADEILYTAHLCGVETIYAVGGAQAIIAMANGTQTVAKVDKIFGPGNAFVTEAKRQV
                     VQEGTAIDMPAGPSEVLVIADEFADPAFVASDLLSQAEHGADSQVILVTPSESLARAV
                     DEELEKQVAVLPRAETARKALAHSRTFIAENLQQAVEISNKYAPEHLIVQTENARSLL
                     ADLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTP
                     QGFLALAETVERMASAELLDAHRNAVSLRVAKLKG"
     gene            complement(42542..43441)
                     /gene="hisG"
                     /locus_tag="PXD69_000248"
     CDS             complement(42542..43441)
                     /gene="hisG"
                     /locus_tag="PXD69_000248"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDL6282490.1"
                     /translation="MTTQNRLRIAMQKKGRLSQECSELLKQCGVKIIWNDQRLIAYSE
                     NMPIEILRVRDDDIPGLVFDGVVDLGIIGENVLEEVELGRLSAGENVAYKKLRQLDFG
                     GCRLSLAIDRDKNYNNIKDLEDAVIATSYPNLLKRYMKEQNVPFKSILLTGSVEVAPS
                     AGIANAICDLVSSGATLEANGLKEVEVIYRSTACLIQRQEPLSAEKQALVDKLLTRIQ
                     GVQQANESKYIMLHAPKDKLAEITALLPGVENPTILPLANDQTRVAMHVVSQENLFWE
                     TMEQLKEMGASSVLVLPIEKMLA"
     misc_feature    complement(43474..43601)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            43800..44657
                     /locus_tag="PXD69_000249"
     CDS             43800..44657
                     /locus_tag="PXD69_000249"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDL6282491.1"
                     /translation="MQISLKKIYSGKVRDLYEIDEKRMLMVATDRLSAFDVILDDPIP
                     RKGEILTQISNFWFNKLAHIMPNHFTGDSVFDVLPQEEAEAIQHRAVVCKRLIPVKIE
                     SIVRGYLTGSGLKDYQQTGTICGLTLPEGLVEASKLPQPIFTPSSKAEVGDHDINISY
                     EECERQIGQELAAKVRDAALKLYTEAANYALTKGIIICDTKFEFGLDENGELTLMDEV
                     LTPDSSRFWSVETYREGTNPPSFDKQFVRDWLENSGWNKQPPAPKIPAEVIEKTVAKY
                     QEALDLLTK"
     gene            complement(44798..46279)
                     /gene="ilvC"
                     /locus_tag="PXD69_000250"
     CDS             complement(44798..46279)
                     /gene="ilvC"
                     /locus_tag="PXD69_000250"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDL6282492.1"
                     /translation="MANYFNTLNLRQKLDQLGRCRFMDRDEFADGCNFLKGKKIVIVG
                     CGAQGLNQGLNMRDSGLDIAYALRAEAIAEKRASFKRASENGFVVGTYEQLIPEADLV
                     INLTPDKQHSKVVADVMPLMKQGAAFGYSHGFNIVEEGEQIRPDLTVVMTAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGLAIAKAWASATGGDRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSIVCYDKLVSEGKDPAYAGKLIQYGWETITEALKQGGITLMMDR
                     LSNSAKLRAFELSEQIKEELAFLFEKHMDDIISGEFSSTMMADWANGDANLLKWREET
                     GKTAFENAPQADGIKISEQEYFDNGVLMVAMVKAGVELAFDTMVSAGIYEESAYYESL
                     HELPLIANTIARKRLYEMNVVISDTAEYGNYLFSHVATPILAEKIIPTLEKGDLGEPT
                     PAVEIDNVTLRDVNDAIRNHPIELIGQELRGYMTDMKRISSQG"
     gene            46501..47736
                     /locus_tag="PXD69_000251"
     CDS             46501..47736
                     /locus_tag="PXD69_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HDL6282493.1"
                     /translation="MKINRIILQSCSECGQQVRVPLTSNGNAVCPVCHNILRKSNTWS
                     LHRSAFLALAILILLPFALTFPLMSIDLLGIKINATVWDGIWKMATEGYPYTAFMVLV
                     CAVIMPIAFVLLILTIQLQRIIRQRPRYTLIFLTKIKEWVMLDVYLVALAVAAFKIRD
                     YADLQFDINLIAFVLVTLLNTLLFIKTEPKQAWERFYPEYHALPFDHPSNPTLCPTCE
                     YCFDETILDLKGRQRCPRCESNLSISDNVKIQRVWACLIAGTIMMIPANIFPISTTEL
                     AGQVSADSLMSGVLLFMEMGSYTVAAIVFIASIAVPVSKITIIFYLLLAIHYKWKHPI
                     HWQMKLLHYVHFVGRWSMLDLFVLSLMMSLLERGQILSFSVGEAAFYFGAAVFLTMFA
                     SANLDSRMLWKIHTVQKTS"
     gene            complement(47733..48842)
                     /locus_tag="PXD69_000252"
     CDS             complement(47733..48842)
                     /locus_tag="PXD69_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282494.1"
                     /translation="MKLPKLGNFNQSEIMMRMLVFFNSIFSSTLIAFAIFFFMDNGIN
                     AHEVSFLVSVKFWAIMLFSLSIYIFNQTQIRYLFVLSGILKIIAVIIIYLEQSLISLT
                     AFILINCLGGILFSIPYKLYVQQTAKNISYEFSIRYTIHNIASALSPLLFYLFLDINS
                     YLLFMLVISILFTLFSLKVNAKIAIRKERFFISFKSFDKDFFVFVFLSYILFSMCYLL
                     YEQLIPTILKQWGNFNLYPIWVILNSIAIALLQIRLYKSVTKRITHQFSLILSFIICI
                     ILSGLFMFISQNIVTLFIVLVGVTYLEMFFSTAMDTLIASSKYSKDYFIFANFFLAIG
                     ATLSALSYSIGIEILGYVLLFLLCMLCIIYRKIFI"
     gene            complement(48814..>49142)
                     /locus_tag="PXD69_000253"
     CDS             complement(48814..>49142)
                     /locus_tag="PXD69_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282495.1"
                     /translation="CAHTALNIINATDELVTNSADERFKAPLRKDTRPMIGLFHALFV
                     LHRICSSFQKMKEKIDDVYYDEFNHRLNDNLLKLHETYQTVRENAKTTEIGEKILNEI
                     AKTWKL"
BASE COUNT        14746 a        10641 c         9334 g        14421 t
ORIGIN      
        1 gattcagcta ttttcacttg taatggagtg taacaaataa tcaaattcat ttaaatttac
       61 tcgcaagcag ataatgagtt aggataattg acaaacaaga aatcatcaaa ccaataaaag
      121 ctcctattaa taaaataatt acctttttag gtttatcttt tattacagga taatccggcg
      181 aagcttggta actaaaagtt tgtgttttaa ctgtctttgt tttttcaaat aacggctcta
      241 gctgtttaag ttggtaatca atttgataat aacgtggtgg ataaacaaca cctttctcat
      301 tagccacatc aatttgagcc tttaggtatt tttcccctaa cataaataaa tatgaactat
      361 ctgctaattt tgaatcagaa agggagattt tagtatcact taaagctgct gcaatatttg
      421 atgcatctga ttgattaaat gcttttgaat attctttaat acctgctttt tgtgcagttt
      481 cataggcttt atttaagttt tccaactgaa ccgacttatt cacagataaa tcttcctgaa
      541 ttaatgattt ttcatattgt aatgcagtaa gcacattttg gaaatcgact agaaaatctt
      601 ctaattcaac agcaaatgct ttgctattaa tgaattgaac caacttacca agggtgtcct
      661 gcgcctccat aggtgtctct gcagaaaaag atagtgtacg acctattgca ttaggatctt
      721 tctttgcatc aggaataata aagctggtat tttcattact caaattggat aaaactgtgc
      781 gttgcccctg ctcatctttt ccttcagcta acgtcttata cacattggaa gtgataaaaa
      841 attcattttt agtatcttga gattgtgcta atcggttaaa attgttgaac aaactcgcag
      901 acaatgcatt tggatcaaca ggatctacac gcaaaatccg actatattct ctgcgaacat
      961 ttaaatactc acctaactct gttaatttag gggcaataac tgttgcctta gacgtccatt
     1021 gctcttttgc agtaaatgca taaataccag caagtaatgt ggtaatgaat gttgttataa
     1081 caatccacca ttttttatcc catagagcac gaaaaatctc aattaaatca atctcatccg
     1141 agctttgctc atgacttttt actgaatctg ccatagtttc ctctaaaatt tgcatgtttc
     1201 tgtacagcat tatacataat tttcttattt ccactgcatt catttactct tttttaagat
     1261 tgcacttcct atgtaattat tagataatat ccaatcacag taaaattttg atctaaaaca
     1321 aaatgagcga tattcaaatt cctttaatct ttactgatgc ggcggctcgt aaagtaaaaa
     1381 gcttaattga gggcgaagag aacccgaatc ttcgcttgcg tgtgtatatt acgggtgggg
     1441 gctgtagtgg attccagtat gggttcacct ttgatgatca agtcaatgag ggagacctta
     1501 ccattgagaa tcaaagcgtt ggcttggtgg ttgacccgat gagcctacaa tatttaattg
     1561 gtggcacggt ggattatacc gaagggctgg acggctcacg ttttgtcgtg aataatccaa
     1621 atgcaagctc aacctgtggt tgtggttctt cctttagcat ttaattcact cgaattattg
     1681 ccttattcaa tatcagtctc acaagtaaat tttttactaa aaatgaccgt ttgtattaaa
     1741 caaaatagcc taacttattg agtttaggct attttttatc attatgtttg cagttgcctt
     1801 tacaacaaag tgggacagga tcttcgcctc cctcactcaa agggttgcaa cgcagaatac
     1861 gcttaaacgc taaataccca cctttaattg ctccgtggat tttaatcgct tcgaccgcat
     1921 aggtggagca ggttgggtaa aatcggcaac gtgggccaat caatgggctg atagcatagc
     1981 gatagaaata aatcggtagc aatagaattt tggctaatag gctgagacga ggtggctgat
     2041 ttatggattc tgttgtgccg gctttttgct caggcgaatg tgtcttgacc atagtttttc
     2101 caatgtttca aacagcgttg cgttgtctaa tttgccaatg ccgccttttg ccacaaatac
     2161 aaaatcgaaa ttcggcaatt cgtgttgctt gaggcgaaaa ctttcacgca ctatccgctt
     2221 aatgcgatta cggtcgtgag cccgttttaa atgttttttg gcaacagtta agcctagacg
     2281 aggattttct agattattct ctctagcaag aagagtcatt tggggtgtgc tggctcgaag
     2341 tggctcttca aacaccgcct taaattgaac gggagctaac aaacgtagct cccgagagaa
     2401 atttagcttc ttcacactta atcagaaagg tgttttggct ggttctgcaa ttatgcagat
     2461 aaagatttac gacctttagc acgacgacgc gctaacactt gacgaccgtt tttagtagcc
     2521 atacgagcac ggaaaccgtg agtacgagca cgttttaata ctgatggttg aaatgtacgt
     2581 ttcattgctt atctacctaa aatttaaaaa gttggcataa aatggtttct gccaaacaag
     2641 gaccataaaa aagagttgca attctacagg caattaaaat aaaaagcaag aaacaatcca
     2701 agcacaactc gggttgtttg caaaattttt gaaaaatacg accgcttgtt ataatcgcag
     2761 aaatttatat tggtttgtgg cataatcgaa aaaatattaa ctattgatga gaaatagaac
     2821 aatgaatcaa ccccaacaaa taggtatttt gctggctaat ttaggtacgc cagatgaacc
     2881 cacgccaagt gcggtgaagc gttatttaaa gcaattttta agcgatcctc gtgtgatcga
     2941 tctaccaaaa tttaaatggc aagcaatcct aaactgcatc attttgccaa gacgttcgcc
     3001 aaaagtggca aaattatatc aatcagtatg gagcgaagaa ggctcaccgt tattggcgat
     3061 ttctcggcaa caacaacgag cggtacaacg ctattttgat gccaaaggca aaaatgtggt
     3121 ggtggaattg ggaatgtctt acggcaatcc aagtattgaa agtgcgaccg ataacctcat
     3181 caagcagggg gttgagcgga ttattgtgct accgctttat ccgcaataca gtagcactac
     3241 taccgcttcg gtgtttgatg cgtttgccaa cggtttaaaa gcacagcgta aaatcgtgcc
     3301 gtttgatttt attcacagct atcataacga tccgctttat attcaagcgt tggctaactc
     3361 tattgatgtt aaacctgacg agttattact gttttcattt cacggcattc ctaaacgtta
     3421 tgaaacggaa ggtgattttt acgccaagca ttgccaagaa acagcagaat tagtggctga
     3481 aaagctaggt ctgccaagag aaaaatggta tttgtctttc cagtcccgtt ttggtgatga
     3541 agagtggcta cagccttata ccgatcaaac ccttgaaagc ttcccacaaa aagggataaa
     3601 aaaagtggct gtcgtttgcc cgggcttttc agcagattgt ttggaaacct tagaagaaat
     3661 tacagaagaa aaccgcgaga actttgaaca tgccggcgga gaatcttatc gctacattcc
     3721 agcgttaaat gcgagtggcg atcatatcaa ggcattagta aaattaatcg aagcgaaaat
     3781 ataatataat ttgggcggat aataaatccg cccattttta tctacaccct ataggaatgt
     3841 acttatttta tttaattttc tctaatattt ctctgttaaa tcccatcagt tctacttttg
     3901 tattcggtaa attagggaag tcatttaata aatcttcaaa cttatctaac caatggtaat
     3961 tagtgctggt ttgactaact aaaaaccaca gaatagctac ccttccgaaa attctctcct
     4021 ttgctttgtc atccagcgat aagtttgaaa aatactgctg cattttttta aatttcgacc
     4081 aacgaggatc atctagctta ggaatagcaa tatcgctaaa ttttctgttc caaatacgag
     4141 aatggtgagc agaaaggttt cttacaatgt ttatttcatt caaccaattc tttaacgtat
     4201 tctcatctac attaaatttc ttagcaattt tcctttggtg ttgcccattt aacaatgagt
     4261 aaaacttaga taatgcacca aaatcccagg tttcagtaat tacccaaaaa gggatttcct
     4321 tctcattttt tctatgccat tcaatagaat catctttact acgcttaatt ttattagctg
     4381 tagtttctag ccaatttgca taagcataat tagatttcca ttgaaatttt aagaactttt
     4441 gattaatcag agaataatct tcataagcca aaggattttc acgccccaat tcatgagcca
     4501 taatattacg aatattaact tctaaacgtt caataatatc caataataaa agccttagtt
     4561 ttttatcaaa aatatatagc ttataaactt cttcaaattg tacattttcg agaaaatttt
     4621 cgctaagccc accatcttga ttaggctttc tagatatatg ccaaaatcca gataaacgat
     4681 aataccctac ctgagataat tttttctctg catagctttt atcatttatg agcattcctc
     4741 tagatatgag tagttctact aattcgtgat actctttatg tggttttgta ggcataaaat
     4801 tgaaggcatt ttaagaaagg caaggacgta gcttgacact ctaagtcgat tacatttagt
     4861 aaacctcagg gacaggggct acgccacgat tgcaagggat tatacatttt agctgattaa
     4921 agtcaaaagg tttcatcaat taataatagc aatactgtac ttttaaggac tataattgca
     4981 aaaaactgat aaaattttac cgcttgttac tgcttacggg ccgcttttac aacacctttt
     5041 acacttaata gcttacggag aatcagctca gaatgctctt tattttccac agaaatttgt
     5101 actctcactt gatagatatt tccttctctt gcctcgctat taatgctgcc aatgttgcta
     5161 tttaatttgg caagcgttga tgtgatcccc gcgagtaccc ctggttcatt gataatatcc
     5221 agtacgattt ccgtttcaaa ttgaatcgct ttttctttgg caatttccca ttccacaggt
     5281 aaataattac tcggctctgt tgcgtaatct ttcacattac cacaacaagc attgtggatt
     5341 gccaatcctt tacctgaact gacgtgagca ataatttcat cacccggtat aggtaagcaa
     5401 cagtttgcaa aactgataag gcggttctca atcccttcaa ttttaagcgg ttgattattt
     5461 tctggattac catcagtatc aattaatagt ggctccccta ataagcgttg agcgataaca
     5521 ttactcattt ggttacctag accaatttca gccagtagct catcaaagct tgataaacgt
     5581 agctcgtcta atacggattg aatagtttct gaacacaatt catcaagtga gcgtaaattc
     5641 attgcccgaa ctagctgtct acgcccaagt gcaatcgcct catcgtgctg ctgattttta
     5701 agcgattgac gaattttagc cctcgcctta ccacttacta caaaatttaa ccacgatgca
     5761 tttgggcgct taccttgctc ggtaataatt tccaccgtct gtcctgttcg tagcggttct
     5821 gaaagtggat acggattgcg atcaaccatc gcacctacac aacgatcccc aatgcctgaa
     5881 tgcaccgcat aggcaaagtc aatagcggta gcattcgccg gcaattcaac aatacgccct
     5941 ttcggggtaa agacgaaaat atcgtcagag aacagatccg atttaacgct atcaataaat
     6001 tctgctgtat tgccggcact gttttgcaat tcaacaatac tttgtagcca ttgctgggct
     6061 ttgagttgaa cggtcgtgtt atggtgcgac tcgccctctt tgtaacgcca gtgagctgtt
     6121 acccccatat ccgccatttt gtccatatct tcggtgcgaa tctgtacctc caccggtaca
     6181 ccgtgcgggc caatcatcga agtgtgtaaa gattgatagc cgttcggttt tggcacggca
     6241 atataatctt tcacccgttt cggacgaggc ttatacagtg cgtgcatctg ccctaataca
     6301 cggtaacaat tatctacatt atcaaccact actcggaaag cataaatatc taaaatcgaa
     6361 tgaaaatgtt gatctttctg gcgcattttt tggtaaatgg aatagagatg tttttcacgc
     6421 ccatacacac gggcttcaat ttgcacctct tctaaccgac cacgaatatc atcggcaatg
     6481 cgttgaatta gctctttacg atgtcctctg gcactggcaa tagccatttt cagtacccga
     6541 taacgttgcg ggtgcattgc ctcgaagcct aaatcttcca actcgttttt aatatgctct
     6601 attcccaagc gatgtgccaa cgggctataa atctctaagg tttctttcgc tatacggcgg
     6661 cgtttatccg gacgcaaagc accaagcgta cgcatattat gggttcggtc ggcaagttta
     6721 attaacacaa cccgaatgtc tttggtcatt gccaaaatca ttttacggaa gtttgccact
     6781 tctgcctctt ggcgggtgcg gaattttaat ttatccagct tagaaacgcc ttgtacaata
     6841 tctgctacgc tctgtccaaa ttccgccgcc agttcttctt cggtgtaagg tgtatcttca
     6901 atcacatcgt gcaacaaagc cgcaatcacc gcttcttgat cgagcttcat ttccgcaata
     6961 atcgacgcca ctgctaccgg gtgagtaata tagggctcac cgctagagcg tgtttgtccc
     7021 tcgtgagcat cacgggctat cacataagca cgttttacac gctcaatctg ctcgggtggc
     7081 aaatagcctt gaataattcg atctaaaggt tcaaaaagat acacgttata cctcaacaac
     7141 agaaataaaa atggacaacg aatttgcaaa ttttgaggaa aatcctaccg cttgcagact
     7201 caattgtcca ttctctattt acgaaaaata aaattacgct tcgttgctca tttcagttaa
     7261 aaatgaaatc gcctcttgct ccgccgcttc ttgcttaata gagtcgtgat tttccagctg
     7321 atccataatg tcagttgtaa ttaaaccttc ttcaatttca cgtaatgcaa tcacggtcgg
     7381 cttatcgttt tcttcaggca caagtggctc acgggtgtga agttgtaatt gtcttgcacg
     7441 acgtgcagca attaagatta aatcaaaacg gttgccaatt ttctccgctg cttcttgtac
     7501 ggttacacga gccataaatt tactccaaag atttattcgg ttttattcat aaaaagattg
     7561 cgaattatac agaaattccg ccaattccgc aatgaaagcg ggctaaattc acaaaattta
     7621 tttggtattc agtaaaatcg ccaataattc agcctcaacc tctttgccga attttcccat
     7681 tctaaaatcg gcttttagtt gctcgaattg ctcagggttc gctgccattt tatcttttaa
     7741 aaattgcgga aattcagata acactaattc tgttttgcca ttacgaatat caaaaatagt
     7801 tggaattttt tgcgcagaaa tgaccgcttg ttgctgttca tcgctgtcaa aatgtttgcg
     7861 ttcctgatta tctttgcgag ccacatattt caccttaatg ttaggattga gctttgccat
     7921 tcgctggaaa taagccacaa tttccacaca atcggggcaa tatggctctg ccattaccag
     7981 ccagtcccct tgcacgccaa cagcttgcag tttttcttcc gtatctgtgg aaagcttgac
     8041 ctccacatac acttctaatt gattttcacg atcttcatcg ctgttaaatt ctaaatattc
     8101 gtaaaaatgt gccataattt tgtcttttcc tatctcatct taaatggatt tacgccataa
     8161 aatttcacaa tcaactttaa cgtcatctat tttctgttgc gctaactttt gctgaattaa
     8221 ttcaaaggta cgttcggcaa tttgttggtg gtcttgctta attgaatgaa tatgaaaagg
     8281 tagtgcattc agtaaatggt gatcatcaaa ggttgctaaa tgcagttctt gagtcaataa
     8341 tttatccatt tgttggtgtt cagtcagata gcgcattact ccctcaagta gggtaaaaga
     8401 ggctgtgaat accgcttctg ggagcctgcc aagtttttca actatctgag cgaacatttg
     8461 atagcccgat tccggctgat agtcttgatg cagaacccaa ttttcatcaa gtgccaaatg
     8521 tgactgctcc aaaccttcac ggaagccttt taaacgattt tgacttggcg agagtgaaag
     8581 ttgtccacct aagtaaaaaa actcttttaa gtgataagcc cgtacaatat tttccaccaa
     8641 catactgata ctttgtgtat cattactggt gatagaaggg atattcaacc cagaaatata
     8701 gcggtctagc tgtaacattg gggtatattg tgccgcattt tgataataag tcggctcatt
     8761 atgtgtcgga gcagtaatca gtaaatctac ctgtctgtct aataaacgct ctatcgcttt
     8821 cttctcacct tcaaaggtat catccgagca agcgatcact agctgtaacc cgttttcacg
     8881 gcataatttc tctaaggttc ttgaggtcag agcaaagcca taattcgtta aatcgggaat
     8941 gactaaaccg atcacattcg tgcgttgagc ctgtaatgat tttgcatata cattagcacg
     9001 ataaccgtgt tttttagcga tctctttcac tttttggcag gtttcggatt tgattctaaa
     9061 atcattgccc cgcccattta aaatcatact gactgttgtt ttagatacgc cgctgagttc
     9121 cgcaatatca ctgagcgtta ggcgtttttt agtcacactt atctcctttt agcataaaaa
     9181 tgggcattac tgcccattgc tttattctac gctaattggc aatacttttg ctactttcac
     9241 ttgaatcgga cgagagcttt ttacgacatt ttcacgctta gcgataaaaa agcgtgaagt
     9301 cagcactttt tccccgccgt ttacgaaaat ttccaccaca gaacggtcaa agaaaatctc
     9361 gattgtctct aattgttcaa ttttgcaatg acgaaccgag ccaaattttt ccatcaattc
     9421 tgtttgttcg gtttggctac gatctaagct caacacccca ttttcaaaac gtaagctgag
     9481 cttttgcccc tgttcattgc tgaaaaaatc caacacaagc ggttgatttt ccacagaaat
     9541 ttgcaagtag gcagtatcca aattctcgat tgcaaaattt tctgacattt cgaccgcttg
     9601 taattcgcct acattcacga ttgggttttg tatcactttg ccgttttgca gggaaagttt
     9661 acgaggcaat gtcagcattg aatgccactg atatttatca gttgggtaag tgagatcagg
     9721 caagccgacc cagccaaaca aaatgcgatc ggaattttcc accgtttgcg gtgcgtaaaa
     9781 gtcaaagccg tagtccagct cttcaatatg ctctgcccgt aatctgttgc cgtttagctc
     9841 gccaagtgcg taagtggcgt ggtagttatt ttggaattga tggctttcac gcagtttgcc
     9901 ttgtggcgac cacacaaaca gatctttacc accaagtgag aacagatccg gacactccca
     9961 cataaacaca ttgctgttat caaaattgtg gacttccagt tctgcgatta aacggggtgt
    10021 ggcatttaaa tcgtccattt cataaattaa cgccgtgccg gtcaagtttt cacgctgagc
    10081 ccccaacaca aaacgaattt tgccctctgc ggtaaggtaa ggtttcgggt cacgcacgtg
    10141 ttcggtgtag cctgccggtg cttggtcgat aatgcaacgc ttttccaata atttgcccga
    10201 tttatcaaaa atcgcgatat tttggtgagg aatgcgggca ttatctgatg ggcggcgtgt
    10261 attgccggtg taaaaagcga caatcttatc ttgccataaa atcgccccac ctgaataaca
    10321 gccgtgggat tcaaacagct catcgggaat cagcaaatcc cctttactga acgtttgaaa
    10381 atcggtagtg atgaaatgct gccaatgttt cattccatgt aatgccccat aaggaaacca
    10441 ttgggcgaaa atatggtatt tttcaccatc gaaaatcaag ccgtttgggt cattaaataa
    10501 gcctgtttcg ggagcgagat gataggttgg gtaaaaatcg ggatcagata aaacggtttg
    10561 gcgaagagcg tttaattcgc cctcgctttg tgcgtgcagg cttttgtatt tgccgttgtt
    10621 gaaaatgtgc atagagtgtt cctgtcattt cagaaattac gatggtgcaa gcgtccacgc
    10681 ttgtaccctt ttgtaaaaaa tgaggcacaa gcgtggacac ttgcgccatc attacattat
    10741 tccgccaaaa atgcgtctaa ctccgcttta ttcggtaatg ccgacatcgc cccttttgct
    10801 gtggtggcta acgcaccgga agcatttgct ttgcggatca cttcaactaa cacagtttca
    10861 tcgtgccaat tcggcgtttg agcaagaccg gctaataatc cgctgacaaa ggcatctccg
    10921 gcaccggtgg tatccacagg tttcaaggct ttgccggcaa cgacttggct ttttccgttg
    10981 aaatggtaga ttgcaccgtc tttgccaagg gtgataataa tcaatttctc cggatactga
    11041 gcggtaatag cttgtgtggc ttgttccaaa gtttctgtct cggttaataa ggtcagctct
    11101 tcttcggaaa atttgagaat atccgccatc gccaccacag aatttaccac tgttttcatt
    11161 tcatcaaggc tcttccagag cgattcacgc aagtttggat caaacgaaac atagccaccc
    11221 gcctttttca ctcggcgaat cccttcaatg gtagtggaac gggatgggtc gttaatcaag
    11281 gcaatagaac agcagtgtaa gaaatcacct tggttaaatt caggtaaatc gccgatttct
    11341 aaaaattggt cggcactcgg atttaccata aaagtaaaac tacgctcacc gttatctaag
    11401 ccaacaatca cggtggaagt gcggtgctga gcgtctaaaa tcatctgttt ggtgcaaaca
    11461 ttttctgcct gtaacacttc tcgcataaat ttacccagag ggtcgttacc cacacgcccg
    11521 ataaatcctg cctcaacccc taaacgagaa acgcctactg caacattcgc cggagcacca
    11581 ccggcacatt ttaaatagtg atgttcgccg tcgggaatta aatccaccac cgcatcgcct
    11641 gttacccaaa tcttactcat ctcatacacc tttaattagt cacaaaacac caagctaaaa
    11701 cgatttagca tttattcgat tatatactaa aagaccgctt gtacatacct acaagcggtc
    11761 attttttctt taatttttac agattaacca cgtatttacc tacacctaaa tcatcttctt
    11821 tacgagtgcg ggcaatcacg ctttctgccg attccaccac acgtaatccc atttggtctt
    11881 cggtacgaat cacttcgcca cggagtgagt tggtataaac atcggtgatt ttcacatcga
    11941 caaatttgcc aatcatatcc ggtgtgccaa caaagtttac tacacggtta gtttcggttc
    12001 tgccggttaa ttccatcaag tctttcttag acgggccttc aaccaaaatg cgttgttctg
    12061 taccgagcat tgcacggcta aattgcattg cttggtggtt gatgcgttgt tgtaaacggg
    12121 ataatcgctc ttttttctca tcatcggaga cattatcagg cagatctgcc gctggtgtac
    12181 ccggtcgagc cgagtagata aagctaaagc tcatatcaaa gttcacttgc tcgatcactt
    12241 tcattgtttg ctcgaaatcc tctgcggttt cgcccgggaa gcctacaata aagtccgaac
    12301 taatttgaat ctcaggtcga acagcacgca atttacggat aatcgctttg tattccaacg
    12361 ctgtgtggtt acgcttcatc attgttaata cacggtctga accactttga atcggtaaat
    12421 gtaagaaact gaccaattca ggtgtatcac gataaacttc gataatatca tcggtaaatt
    12481 caatcgggtg gctggtggtg taacgtaagc ggtcaatacc gtcaatcgct gccactaagc
    12541 gtaataattc ggcaaaggta caaatgccgc catcaaaagt ttcaccacgg taagcattta
    12601 cgttttgacc gagtaaatta acctcacgca caccttgtgc cgcaagttgg gcgatttcaa
    12661 ataatacgtc atccaccggg cgggaaacct cttcgccacg agtgtaaggc acaacgcaga
    12721 acgaacaata tttattgcag ccttccataa ttgaaacgaa tgctgtaggg ccttcggctt
    12781 ttggctccgg caagcggtca aatttttcaa tttccgggaa agaaatatcg acaatcgagc
    12841 ttttaccgcc acggatttgg ttgatcattt caggcaaacg gtgcaaagtt tgtggcccga
    12901 aaacaatatc tacataaggg gcacgatcac ggatatgctc cccttcttgt gaagccacac
    12961 aaccgccaac accgataatc aggttcggtt tatctttttt ccagtttttc caacgcccga
    13021 gttgcgagaa tactttttct tgtgcttttt cacggataga acaagtgttt agcagcaaca
    13081 cgtctgcatc ttcagggttt tcagtcagtt caaaaccgtg agtagagttt aggagatccg
    13141 ccatttttga tgagtcgtac tcattcattt ggcagcccca agtggtaata tgtaatttag
    13201 ccataacgtt taaaattaat aaataattca ataacttaga aaagaaaagc gtaaagcaat
    13261 ttattatttt tgacttaaaa taaacccttt acgcaaaatt tgtggcgtta ttttaccttg
    13321 ttgcctattt tttatctata aataatcgcc atttatccga ttttacctaa aacaaaaaag
    13381 ccacgatctt ccatcgtggc ttccagctaa gtaggaggta ttatttggtt aaggttaaaa
    13441 ccacgctttc accggcaaca acttggccat ttaatttaga taagttgctg atttcatcca
    13501 tatttgaaat cacgattggt gttaatactg atttggcttt gccttcaagt agagctaaat
    13561 caaatttaat gatcggctcg cccactttta cggtttgacc ttcctgtgca aggcgagtaa
    13621 agccttcgcc ttttaattca acagtatcaa taccgaagtg aacaaataat tccacgcctt
    13681 cttcagattc aatcgaaaaa gcgtggttgg tttcaaaaat tttgccgata gtcccattta
    13741 ctggagcaac gatagtgtct ccactcgggc gaattgccac accgtcacct acaatttttt
    13801 cagagaaaac aacatcaggc acatcttcaa tatttacgat ttcacctgtt aatggcgcat
    13861 agattttgat ttcttgactc tctttttgtt ttgagccgaa taatttatca aataaaccca
    13921 tcttaaaatc tcccttagat attagataca aaattctcgt acattttata cgagaatttt
    13981 gtatttgtat gctaaataat taaaattagt ttaatttctg ataaaactca tctactaagc
    14041 gttcaatatc tgcagcagtt ggctgagcaa gcgcctcatc agctaatgct ttagcatcgg
    14101 caaaattaat tgagcgaatg agttttttaa cgtgtggcac agagataccg ctcatactaa
    14161 attcatctaa tcccataccg agcaacaacg cagttgcacg cacgtcaccg gctaattcac
    14221 cacacatacc tgtccatttg ccttcagcgt gtgaagcatc aataacttgc ttgattaagt
    14281 ttaagactga tgggcttaat gggttatata aatgagcaat aatttcatta ccacgatcta
    14341 ccgcaagtgt atattgggtt aagtcattag taccaatact aaagaagtcg gcttcttttg
    14401 caagatgacg tgcatttacc gctgctgatg gggtttccac cataatacct agttttaagt
    14461 tctcatcaaa agcgtgacct tctgcacgta attgatcttt caattccgca acgatggatt
    14521 ttaataaacg gatttcttcc accgaaataa tcatcgggaa cattaccgct aaattaccga
    14581 acgcagaagc acgtaatacc gcacgtaact gagtatctaa aatttcacgg cgggtgaaac
    14641 cgatacgcac cgcgcgccaa cctaagaatg ggttcatttc tttcggtaaa tcaaggtatg
    14701 gtaactcttt atcacctccg atatccatcg tacgcagaat gaccatttga ccattcattg
    14761 cttcaacaat ctctttgtag gcttgaaatt gctcttcttc tcccggtaat tgagtacgat
    14821 ccataaacaa aaactcagta cggtataaac caaccgcttc accaccgttg cgtaatacac
    14881 cttccacatc acggatagta ccgatattcc ctgccacatc aactttatgg ccatctaatg
    14941 tttgagcagg caactctttt aatttggcta attcttcttt ttccgcattt aatttctctt
    15001 gtaatgcttt gaaattagcg attttttctt ccgatggatt taaatgtact tcattgttca
    15061 ctgcatctaa aatcagaaaa tcaccagttt taactaggga agtaacattg ttagtaccaa
    15121 caatggcagg aagctctagg gaacgagcca taatagaagt gtgagaagta cgaccaccga
    15181 catcggtaat aaagcctaat actttatcta aatttaattg agctgtttcg gaaggggtta
    15241 agtcataagc gactaaaata acttcatctt gaatatcacc aagatctacg atattcatat
    15301 ttaaaatatt gcgtaccaag cggttaccaa tatcacgaat atcacctgca cgttctttta
    15361 aatattcatc gtcaatttcc gcaagcattg aagcctgcat ctcaatcact ttacttgctg
    15421 caacatccgc agtcacaaga ttatcagtaa ggtaactcaa aatttcttct tcaagctctt
    15481 catcttctaa gatcatcaag tggccttcga aaatcgcctc tttttcctca cctaatgtac
    15541 ggcgagcttt ttctttaatc gcggttaatt gagcagctgc tttttcgcgg cctgtaaaga
    15601 attttgcttt ttctgcctca acttcgcttt cagtaatttt gcgagtattt agtacaatcg
    15661 gctcttcttt taaaaccaat gcttttccaa atactgcacc aggggaagct gcgatacctg
    15721 taatcataat tgtgtcctta atttaagatg atgtaaaaat catctggatg ttacatagca
    15781 aaacacttta ttgtagctta ttaagctaca ataaagtgac ataaatctta aatccgagaa
    15841 tagaaaaatt attctaaagt aggaatcaaa tcaactaaga aatcaactgc tttttgctca
    15901 tcttcgccgt ccgcagaaat tgtaattgtt gtgccttgag tcaaacctaa tgtttgtaat
    15961 ttgaataagc tttttgcact tgcactttta ccacctgaag tcacagtgat atcagaagca
    16021 aaacctttag ctgcttttac aaattcagcc gctgggcgag tgtgtaaacc atttggagcg
    16081 gtaataacaa catcttttga gtacataaaa tcttcctctt aaatttgaaa gttaaaaaaa
    16141 tttgttttaa tccatttatt ttgcgcacgc aactttacta caaattcaaa ttaaaaacac
    16201 gctaaaaagc gcaaaaactc gtcgtatcac cctgctaaat agggtgtttt ttaagctaac
    16261 ttaaaaatca tttgtcgaat atcaagattc tagcacacac ttaagcggaa atgttacaat
    16321 aatttcgcta ccacttcttt cacttatatt ctaaatttgg agcaatatgc ttagcacatt
    16381 aaccaaaaca accgcatggt ttatctactt tagtattatt gctctctatg tttttagtct
    16441 atgggcgtta atggactatc accaaaatga taccttattt gttttttccg atataacggc
    16501 cacggtcgct tatagcctac ttcaagccag cctctctgcg gtaatttcac tatttttagg
    16561 cagcctactg gcaagatctt tcttttattt ggactttaaa ggaaaaaatt tactctataa
    16621 aaccatttcg tttatctggg cattaccctc actagtaatt atttttgcgg taattggcgt
    16681 atttggtaac tcaggctggc tagccaaact tttccaacaa ctcggttgga attggcaatt
    16741 taatttatac ggcttgcacg gcatcatttt ggctcactgc ctgtttaaca ttccgtttgt
    16801 gatgaaatat tataccggag ggcttcaatt gactccaagc agtcgctttc agcttgcggc
    16861 tcaattaaac ctaacaggtt ggaattatat ccaaattgtg gaactaccga taatcaaaac
    16921 tttgctgcct tatatgttta tgactgtttt tctggtctgc tttaccagtt ttccaatcgt
    16981 attaatgtta ggcggtagcc caaaatacag cacgcttgaa gttgccattt atcaagcggt
    17041 cacttttgaa tttgattttg caaaagccct catcttaatt agggtacaat ttgtagtggg
    17101 cattggctta caattagtaa tgaattatat ctcgacttct gcactcaaaa agctaaaaca
    17161 gcaacctaac cgagtagaaa tttggaaacc aaagcctacc ggactggcta aactcggctt
    17221 acaagcggtt atttttttgc aaagttttgc aataattcta ccgcttgtca gcgtcatttg
    17281 ggcaggacta agcgtgtcaa aactcagtga gcgtttgctc aaccctactt tatggcaagc
    17341 tactcagtat tctttatact taagtttaat tgcttctata ttcgtaatca caatcagcta
    17401 tttgattgca cttgaagctc gccaattact ctatacaaaa gccaagctca gatatagcat
    17461 tctcaccgca atcaccctat tccccttact tctgccgatc tttttattat cggttggttt
    17521 gtttatttta ttaatgaata gtgaactctc aagcgaggca ttactgctac tggtcgggat
    17581 atgcaacggc ttaacattac tgccatttat ttacccaatg cttttctccg caatgtggaa
    17641 tagcctcacc tcgcacgaca aattagcaca aggacttggg ctaaaggggc ttcgccgttg
    17701 gtggattgtg gaaaaaaatc aactaattcg accgcttgtt accgtatttg cgttagcaat
    17761 gtcatcgagc ttaggcagtt tcaccgtcat tgcttttttc ggcaacgctg atttcagctc
    17821 actcccttat ttactctacc aacaacttgg tagctataga accgaagatg ctgccgttac
    17881 cgcactcatt ctgatgttat ttgcgttact accattctta ttcagcaagg ataaactatg
    17941 atcgaactgg atctccattt cacttacgaa caaatgaata tgcactttca gctttctgtc
    18001 aaaaaaggcg aacgtattgc agtggttggc gaaagtggcg caggcaaaag cacattactt
    18061 aatctaattg ccggttttga aaaggcagaa agtcagcaaa gccagctgtg gctaaatcag
    18121 aaaaatcatc ttgataccga agttgcacaa cgtcctgttt caatgctatt ccaagataac
    18181 aatattttcc cgcacttaac ggtagaacaa aacatcggct tagctttagt accaagtttg
    18241 tcgctcaatc cgaaacaaaa agcacaggtt aaacaaattg ccacacaaat ggggattgaa
    18301 accttccttc agcgtcaagc cgatcagcta tcgggcggac aaaaacagcg agtggcatta
    18361 gctcgtactt tgttgcggga taagccgatt ttattattgg acgaaccctt ctccgccctc
    18421 gacccgcaac gccgagccga attacagcaa atcgtgtttg acatttgcca aagcagaaat
    18481 ctaaccctgt taatggtaac tcaccaacta tccgaaagcc tatttctatt taatcgggtg
    18541 ataacggtag cagatgggga gattgtttct gatctctccc ctctttagca aagcagatct
    18601 gctaggttct aaatgtaggg acgccacgct ggcgtacgca acgatgtcaa ttccaacaat
    18661 ctaacggtga atgatgttcc gcacggatac tagcgttatt catttttttc agaactcgcc
    18721 ccctacttta gcaaagaggg gaactgtaac taatattacc tccctattcc gctattctct
    18781 tccccaaaat gtgatctact tcacaaattt ggaaatattt taaatcttct cttttttagc
    18841 taaaccgatt tagttaaaat gcaaccgatt attttttatg aaaggtaaat tcaaatgaac
    18901 tatccaaaaa ttgcagaaca aacgattgca aaattaggtg gcaaagaaaa cattaccaca
    18961 cttgcccact gtgcaacccg tttacgctta accattgctg atgaatccaa aattgataaa
    19021 gaggcgattg aaaatattga aggcgtgaaa ggtcaattct ctactcccgg tcaataccaa
    19081 attatttttg gatcaggcac ggtaaatgaa gtgtatgccc aaatgcaaaa acaaatgggt
    19141 atggcagata tgtccacctc tgaagtagcg gctgccggtg cagcaaatca gccattacta
    19201 caacgtttgg taaaaggctt agccgatatt ttcgtgccga tcattccggc tattgtggct
    19261 ggcggtttgt taatgggtat tcactcaatg ctaacggcag tcggtttctt ctgggaaggt
    19321 gaatctgttg ttagccgtta tccgaatatt tccgatttag ttgatttcat caacactatt
    19381 gctaacgcac catttgtatt cttacctgta ttactcggtt tctcagctac acgcaaattt
    19441 ggcggtaatc cattcttagg tgcggcactt ggtatgttat tggttcaccc ggcacttgca
    19501 gacggttgga actatgccaa aaccttaatg gaaggtaaca tcaaatactg gaatattttc
    19561 ggcttagaaa ttgaaaaagt gggttatcaa ggcacggtta ttccaactat cgtttcggct
    19621 tgggtgttag caacccttga gaaaactttc cgtaaatttg tgccaagcta tttagataac
    19681 ttggtgacgc caatgatgtc attatttatc gccggtattt tagctttcac tgtaatcgga
    19741 ccattgggtc gtgaagcagg ttcagcgatt tcagcaggct taacgtggtt atatgacagc
    19801 ttaggcttta tcggtggagc aattttcggt acattctacg ctccaatcgt gattaccggt
    19861 atgcaccaaa cctttattgc ggttgaaacc caattattag ctgaagtagc acaaaccggc
    19921 ggtacattta tcttcccgat tgcagcaatg tctaacattg cacaaggtgc agcctgttta
    19981 ggtgtagctt ttgcaatgaa agatgccaaa gtgcgtggtt tagccgtgcc gtcaggtatt
    20041 tcagccctgt taggtatcaa ccggcaatgt tcggagtaaa tttacgctac cgccaagcct
    20101 ttattgcggc gatgatcggt tcaggtttag ccagtgcatt tatcgctttc tttaatgtga
    20161 aagcaattgc cttaggtgca gccggtttct taggtattcc gtcgattaaa cctgacagcc
    20221 ttgcaatgta ttctgtcggt atggtaattt catttgtagt tgcatttacc atttcagcca
    20281 tttgggtgaa aaaagcacaa gcgaaataat caaaaataga tcacaaaaaa gggattaagt
    20341 gttagcttaa tcccttttgt ttttaaacgc cttagcttaa caatgagttt cgcaagcggt
    20401 catttttcgc taaaaatttg caaattagct gttgtgcata attcgagaaa tacgcccttc
    20461 ggcaatctct tcatcacgaa ttgtcagcac ttcacagccg tctttggtaa ctacaatttg
    20521 atgctcatat tgtgcggagt ggctgcggtc tttggttttc actgtccaac cgtcacccat
    20581 taagcggact tcttttttgc cggcattcac cattggctca atcgtaaaca ccattccttc
    20641 ttttaacact acaccgccat catcggtagc ataatgcact acttgtgggt cgcaatggaa
    20701 ttcagtacca ataccgtgtc cgcaatattc tcgtactacc gaaaagcctt ctttttccac
    20761 atatttttga atcgctgtac caatttcttt taaacgcacc cccgctttca cggtgcgaat
    20821 cccgacataa agggactcta gcgtaaccgc cattaagcgt ttatcccgca cacttggctc
    20881 accgactaca tacatcatcg agttatcgcc atagtagcca tctttgataa ccgtcacatc
    20941 gatgtttaaa atatcgcctt ttttcagctt tttgtcatca cttggaatac cgtgacaaac
    21001 gacctcattt aacgaaatgc acaccgattt tgggaagccg tgatagccca aactggctga
    21061 agttgcccca tttgccaaaa tgtattcgtg acaaatttta tctaattcac cagttgttac
    21121 gccctctttc acataagggg cgatcattac taaaacatct gaagccagtt tacaggctac
    21181 tcgtagtttt tgaatttctt cttcgtttct taatggaata ttattcatta cattgctctc
    21241 tgctatatct gccataaaaa gtaaggggat tatacctttt ttcagcacaa tccccaaacc
    21301 tcagtttaga tttctacttt aaatcaagtt tcttcataat gaaatttaat atcacaccat
    21361 aaagcggtag aaatagcagt aggctcacaa agagtttaaa cgcataatcg accgaaccaa
    21421 tagtaaacca atgctctgcc atatattcat cgctactttt ataaaaggcg atagcaaaga
    21481 atacaaaagt atcgattaaa gtaccaaaaa tggttgaaca ggttggagca agccaccaac
    21541 gcttaccttg tcttaaacta ttaaatacta gaacgtctaa taattgccca actaaataag
    21601 ctgcaaagct agccagtgca atacggaaaa caaaaaagtt gaactcagtt aatgcactaa
    21661 agccttgaaa ttgggtttca aagaataaaa cggaaatcac atagcttatg acaagtgccg
    21721 gaaacatcac aacaaaaata atttttctag caagatctgc accaaataca cgcacggtta
    21781 aatcggtcgc taagaaaata aatgggaatg ttaacgttcc ccaagttgtc ggaaagctaa
    21841 attctgttag tggtacttga acttcaaagc taatttgcac taaatagttg ctaattgcga
    21901 tgataaaaat atggaaaagt gaaagtaaaa ttagagaacg acgtttgttc tcatccgaaa
    21961 aataagtagt aaagttcata ttgtatcctt tttcgttaaa tgaaaacttg aggtaaggga
    22021 actcaagggg gcattattct atacattttc ccataaaaat caagctcata ttatttcaaa
    22081 aaatgaaaca attaatctat taaattaggg tttatctatt tttgacataa agtaaaatgg
    22141 cacaacttaa cacttacata aggaatagat aatgttacaa ctgagaaaag ccaatgaacg
    22201 aggcgatggt tcttttagct ggcttaaaag ctaccacact ttttcctttg ccaattatta
    22261 cgacctaaaa catatccatt tttcacattt acgggtaatt aacgaagatt tcattgcacc
    22321 taatcacggt tttggcaagc acccgcacga taatatggaa attttaactt atatgttaaa
    22381 aggacgtgtg gctcacgaag acagtatggg taataaaacc gaagtaaaag ctggcgaatt
    22441 tcaaattatg tctgccggaa ccggggtttt ccattcagaa attaatccag atccgaatga
    22501 aaccttacac ctttaccaga tttggattat cccaaaccaa aaagatgtga cccctcgcta
    22561 caaccaagat agatttgccc cgaaagaggg agcaaccttg attctttcgc caaacgcaga
    22621 agaaggttca tttaaaattt accaagatat gaagctgtgg cgttatcaat acccaacagc
    22681 caaatcagag caactggcat tagagccaaa ccgcagttac tggctacaag tggtgaaagg
    22741 gaatctaaac atcaatggcg ttgaactttc caccagcgat gccttaggca ttcgtcaaga
    22801 gaaagcactt gaaataaaca ctcaagatga cgtggaattt ttactgtttg atctagtgta
    22861 aatacaagag acaagcggtt aaatttgtaa aaaatattac taattcagct gcttgctctc
    22921 attaaacatt atcgcaccaa aattctcact cctagcgttt cattttgttg aagtaaggta
    22981 tttatccgtg ctgtttccac acataccata ttttgatacg ccgtttctgt catcgcacta
    23041 acggtattat gccaaggatt ccaaagtacg gtttcggtag cattaatatg ctcaacttta
    23101 atggtgcgct gatttgcaaa atcttgaata aaattcaccg cttgtgccgg ataaatacaa
    23161 tccacatttt cacttatctt gcgaggtgat ggcacttcaa tttcttgatt tgtcaattta
    23221 tcaaaacatt gtgttgctaa gccttgtact tccgttttcg taatatcacc gacctgaaaa
    23281 taagtatgca atgcagcctg tgccggctcc ggtgctaagt gagtaaaata caactcacag
    23341 acttcgccta gtatcatctc gagttttgcc tgattttcta accccaaaac aacacgaatc
    23401 ccatctgctg aggaagtatg ttccagcaaa ttccacgctt gaatacgggc tgtgccgtga
    23461 gcaggctttt tgtctgtacc aaaccaaggg tggcaaatcg gaatgccgcc acgaatcgcc
    23521 acacctgttt ggaaaggttc aatttcactt aaccataata catcttgctg agtattttta
    23581 ggttgccaac tcagtaactg cgcaccttgc aatgcaattt tagccttcac tttggagtga
    23641 ttaatctcta aaacatccaa ttcattatat tttgctaatg ctatttcagg gctgatcatt
    23701 ttgattcgta gattattcat cgtattgctc ctcatcttga aagataaaat gtgaagtgga
    23761 tcacagaatt aaagcttaaa ccgctacctc tttaaaggta atcgttataa taagggcatt
    23821 ctaacatagc gaaggagaaa aaaatgaaaa cactcggcga atttattatt gaaaaacaag
    23881 cagaataccc aggggcaaaa ggggaattaa gtgggatttt atcttctatt cgtttagccg
    23941 ctaaaattat tcatcgagaa atcaaccgtg ccggtttaag tcaagatatt ttaggtactg
    24001 caggttctga aaatgtacag ggtgaagccc aaatgaaact tgatgtattc gccaacgaaa
    24061 cgatgaaaaa agcgttactt gcacgtgaag atgttgccgg ctttgcatcg gaagaagatg
    24121 ataattttgt tgcctttgat aatgagcgtg ggagaaatgc aaaatatatt ttaatgaccg
    24181 atccgcttga tggctcctcc aatattgaag tgaatgtttc tgtgggaaca atcttctcta
    24241 tttaccgccg tgtctcccct atcggcaccc cagtaacaca agaagatttc ttgcaggaag
    24301 ggcgtaaaca agttgccgcc ggttatgtta cttatggttc ttcaaccatg ctggtttaca
    24361 ccacaggcaa tggcgtgaac ggttttacct atgatccgtc attaggctta tttattcttt
    24421 cacaccctga tctaaaaacc cctaccgaag gaaaatatta ctccatcaat gaagggcagt
    24481 atgttacttt cccacaaggt gtgaaacgct ttattaagta ttgccaagaa accgatgaag
    24541 ccatcaaacg tccatactct tcacgctata tcggctcgct ggtgtccgat ttccaccgca
    24601 atttattaaa aggcggtatt tatatttacc caacctccac cgtatatcca aaagggaaat
    24661 tgcgtttact ctatgaatgc aacccgattg cgtttcttgc cgaacaagcc ggaggaatgg
    24721 cgacagatgg tattaatccg attttagata ttaagccaac agagctacac cagcgtgtac
    24781 cgttctttgt cggttcaacc tcaatggtca aacaagcggg cgaatttatg caagaatttg
    24841 caaaataatg ctcctgctta tcactcaata aaactttcaa caaagcagct gcgtattccg
    24901 tagctgcttt tgcctatctt aagattgtaa atttgtataa aaaacaggta agacctcttg
    24961 ccaaataaat aattatctat agaatacccc acctttttac tccattaata ttagcaattt
    25021 attaacattt tatgataaat aaaaactttc cactttctta ccttgccagc tttgtggcat
    25081 ttgctgttag tttatctgca acagcctctg ttttcagaga tgatatcgat cttcaatact
    25141 accgtgattt tgcggagaat aagggtaaat tcaccgtagg tgcaagcaat attgaaatta
    25201 aagataaaag tggcaataca ttagatgcac tcttcccaaa tgtaccgatg ccagatttta
    25261 gtgctgcaaa ccgtaactta gggatagcaa ctctagttgc accgcaatat ttagtcagcg
    25321 ttgcccataa tacacaatac aatactgtgg aatttggcgc cccaggcact aatgccgatg
    25381 cacaccacta cacttacaaa gtcgttgatc gtaacgacta tggaattgtt gaaggtgggc
    25441 aacatcaaga ttatcaagtg ccacgtctca ataaattagt cactgaggtc gcacctgcaa
    25501 cagtgactga tctgggtaat aatgcttcag cctaccaaga tagtagtcgt tttactcact
    25561 ttgctcgctt aggctctggt cgtcaaatag tcaaaaatac cgagcataaa gacaaccaaa
    25621 tttcaacatc ttaccaatat ttaaccgggg gagttcattt accaatcgcg gtacataatt
    25681 ccgattactg gctagatttt agaggaaatg cattaaacaa tagcccatat ggagcattaa
    25741 ctgcatttgg tactcgtggt gatagcggtt caggtgtgta tggctacgat cagaaaacga
    25801 aacgctggct actactggct acttacacct ttggtacgcc tgcaaacaac tactacaacc
    25861 gtgccggtat tatccgtcag gattatcacg ataaacaatt tgccgaagat attgccggca
    25921 cattaaccaa tgcgcaacaa aatgccgttt ttgaatggtc tgcacagggt aaagacagta
    25981 gcattggtaa taaagggaaa aacttaacgg tttcgcttgc tgatcgttca attaaagaca
    26041 atagcgcttc tccattaggc tatggtggca cacctcagct acaacttccg caagataaca
    26101 ccggaaaaac cctaaacatt gaaggacaag atagcactat cgtattaaaa accgatattg
    26161 accaaggtgc tggcgcatta aatttcaatg ctaatgcaac agttcgccct gaaaatgatc
    26221 aaagctgggt aggagctgga attgtagtgg caaaaggtaa acaagttaat tggcaagtca
    26281 aaaacccaca aggtgaccgt ttatctaaat tgggcgaagg gacactacat attaacggta
    26341 aaggcgaaaa ccttggtgac attagtgttg gacaaggcac tgtcattttg acccaacaag
    26401 cgggtgaaaa tggcaaaaaa tctgcattta accaagttgg tattgtgagc ggccgttcaa
    26461 ccgttgtatt aaacagtgct gatcaagtcg atccaaataa gatttacttt ggcttccgtg
    26521 gtggtcgttt agatctcaac ggcaacaaca ttgcgtttaa tcgtattcaa aatagtgatg
    26581 atggtgcgcg tattgttaat aatcacctac aaaaagctgc aacactcacc attaatggcc
    26641 cgaagccccc tgaagcaacg gacttaaaat ggggaacgtg gaaagaaaac agtgctgata
    26701 tttatgaata tatcaaccca catgctaata accgtaccga ttactttacg ctcaaaggca
    26761 atccaaacca atatatgcca acgaatggcg caagtaatgc ccattggacc ttcctgtctt
    26821 ctaacaagga tgcagcagta aaacaagtac tcgcgcaaaa aggtctggag catcgctaca
    26881 atagctttaa tggttttatt ggcgaaacag ataacaccca gcataacggt cgtttgaatg
    26941 tggtgtatga tccaaaagcc tctacaccac cggcaactgc ctctgaagta acttggggta
    27001 aggggctagt agctggtgca gatatttatc tgttcaccaa tccgaaaacg aaaattcggg
    27061 aatactttgc attaaaaggt gatccaaaac aacctgttcc tcgcggtggc ttaagcagcg
    27121 agcattggga atttttagct gcagatcgca atcaagcgat caacaaagta ttagcccgta
    27181 aaaacgcacc aatagagcaa gaaaagctca atagtattta taccttctct ggtggtttga
    27241 acttaaacgg cgatctaact gtgaaaggag gtaaagtgct actttccggc agaccgaccc
    27301 ctcacgctta tgatgcgatc aataagcaag atgtagttta tgccgatgat tggcaaaatc
    27361 gtcaatttaa ggctgataat atgcagctaa accaatacgc tcagctttat gttggtcgta
    27421 atgtctcaaa cctgcaagca aacttgtcag cgaatgacca tgctcagcta catttaggct
    27481 ttatcaacga gcaaactcca agttgctact attctgagta cactggtaaa acaagctgtg
    27541 atacacaagc ggtcgtttct aatgaaattt ttgcaacact gcccacaaca caaattaatg
    27601 gtgatgtcag cttggcagaa cagagccaat tacacatcgg caaagcgaac ctgattggca
    27661 ccattcaagc agcagcaaca acgagcattc gtttagctaa ccaagcaagc tggacaaaca
    27721 ctggggatag ccgtactggc aatttagtgg cagaaaacgg ttcaaccatc aacctgaatg
    27781 aaaaatttgt aacaggcgag ataccgactc gttttaatac gttgattatt gacggtaatt
    27841 tccaaggtaa tgccaaaatc aactacttaa ccgatattgc tgctggcaaa ggcgatcacc
    27901 tacaagtaaa tggtctcgcc gaggggactt tcactcttgc attacgcaac agtggcaaag
    27961 aagctgaagt ggttagcccg ttaagtttat taaccttaac ccatcaggct caggctgata
    28021 aagctaaagt ttcactggaa aacggttatg ttgatttagg tgcatatcgt tatgtgctgg
    28081 caaatcgaag caacggctat cgcttataca atccgttaaa agatgctaaa gatcggaatc
    28141 agtcgattgc aacggcgaaa gcggaattag accatgctat tgcagaagcg gataaacaaa
    28201 aacaggaaat cagccgtttg aacgcagaag ccgagaaaga gcgccaagca gagaaaaatg
    28261 ctaaacaagc cgctgcaaac gcacaatctc agcttagcca agcaaatagc gaattaaccc
    28321 gtttgcaaca atatgctgat tactaccgcc gttactatcc aacgtattac cgccaaatcc
    28381 aagggcaaat tacggtagca aaacagaaag tcacacaagc gagtgctgca ctcactacag
    28441 cagaaaacaa tgctaaagca tccgctgcgc aaattgctaa cgtagaacaa gcggttgaaa
    28501 ctgcacaaaa tattgcaaaa caagtagaag caaaattagc taccttacgt ataactgctg
    28561 gaaatagtga agcaatttta aacgctgagg cactaaaact ttgccaagag aatggtgcaa
    28621 attgtgagca tctacaagca cacgcagaca ctgacagtag taatattcaa caaagcgact
    28681 gggtaagcca atatgccaat accgctcttt ccgagctatc ggcacaggca aattctgcgt
    28741 tgcaaatcgg gcaagactta gatcgccaac tgttcgcaaa acacgataaa ttccacgttt
    28801 ggagcagtat cgaacatcaa aaaaccgaac accaatcgga tttatatcgc ccgtatgagc
    28861 aacaaaccaa cctcactcag ttaggcatag aattaccgct tgcaaacggt atcaatgccg
    28921 gtgtgatgct atcccgcaac cacgctaatg cggaatttga tgagggagtg aacggtaaat
    28981 ccaacttact gatggcaagc ctatatggta aatggcattc ggaaaacggc actttcgtca
    29041 gcctagacgg tagctacggt aaagcgaaaa accgtatcga cctgttcggg gagaaccgct
    29101 ttaaccgtca tattatggcg attggggcaa atcttggaca taacttcgac ttagccggcg
    29161 tacaagttca gcctgctgtt ggtacacgtt actatcgctt cagcgcacaa aattacaaac
    29221 tgggtgaagt agaagtccgc agcccgaaag cacactttat ggcctaccaa gcaggtgtga
    29281 aagtcagcaa ggcctttgac ctctccagct ggaaagttga gcctagcctt gccgcacatt
    29341 atgtcgatgc cagcagcaaa cgcttgagtg tggcagtcaa tgacaatacc tttagccaac
    29401 gtttcggacg ttatctgaaa actgaagtgg gcgtgggtgt tacaaaaggt caatggcaat
    29461 taagctctca ccttggtcta ttgaaaggta acgaaatcgg caaacaacat tttgccggct
    29521 tcaaactggg atatagctgg taattgctat tagcccctaa actaagcaat cgcttacttt
    29581 aggggctttt tagtcaatta attagccggc tctttgcttg cctctagcca ctgccgaata
    29641 aaatcagcaa gctgttcaac atcattaata tccaaccgat tttcccgctc aagcggataa
    29701 tcggttgcgg tcgcgattgt ccactggtct aacgccggca acggtttttc aatttcttta
    29761 cggtgtagtt gaattttcgg cattgtttcg tgcttaaagc cttccactaa aactaaatct
    29821 accgtctctg ggtcaaattt tgcaattaat tgtgaaaatt cgaccgcttg tttagtttct
    29881 gctgcctgct tagtttccgt cattaatgcc caacgttcat cacacacgac catagtcggg
    29941 tttgctcctg cttctcgcaa gcgatagctg tcttttcctt ttttatcaat atcaacattg
    30001 tggtgggaat gcttaatcaa gccaacccga ataccgcaag cggtcaattt tgggattaat
    30061 ttttccaata aggtggtttt gcctgtgccg ctatagccag taatcgccag ggttttgatg
    30121 ggatatggat tgaaagccgt taaatcttct aaacaattaa aattgcgaaa tgcggcttta
    30181 tatgccgaga aatccactgc cacacttttt tgggtttgaa aaaaccacaa taatcggcgt
    30241 tcgccggagg ctaaatacgc tcttaaattt tccgccaccg aacgatgcac caaggcaacc
    30301 gttgggtgtg ggcggtcgcc atcgtgagca taggcaattt gagcctgatt aatgcgtaat
    30361 gccgtgtgta acttgtgcaa tagttgggtt ggaataaacg gcgtgtcaca aggcacaaac
    30421 agtaaatagt cgctctcaat ctgctcgaac ccggaaagca ttccacttag tgggccttga
    30481 aaatcgggca agctgtcttg gtaataaggt aattcagggt aaagttgttg atattgttcc
    30541 accgaacgat tgatattgag ccaaatatcc tcgatttgtg gcgaaagtcg ggctaacagg
    30601 tgcgaaatca acggtttttg atctaacagt tgcaaccctt tttccgctcc attcattcgc
    30661 cgagccaaac ctccggctaa aattaccgct gaaattttct cttccatttc cctctccaaa
    30721 cctgaatttt tttgccaaat gagggctaaa agtatattat tccgcttact attcaacaag
    30781 ttttttaaga ggcatactat gaaatgcaaa cgtttagaag agctattgga actgcttggc
    30841 gaacattggc ggaaaaaccc cgatcttcac ttaattgata ttctgcaaca gctttcggtg
    30901 gaagtaagcg agccggataa ttttcatgcc ctgcgtgacg aggttttgat ttatcagctc
    30961 aaaatgcgaa acgccgataa atttgagccg attccgggca ttaaaaaaga ttatgaagat
    31021 gattttaaaa ccgcattgct ccgagctcgt ggaattttaa acgattaagt ttgtcttatt
    31081 tctcacttat catatttttg aaggaatcat tatgaaaaaa tttgcattaa aaaccgtact
    31141 ggttgctctt tctgcccttt ttgcatttaa cgcaaccgca gttgcagcag atccaactgc
    31201 cggcaaagag tatattgagg tgcgtaaagc cccatcggct caaaaagaag tggtggaatt
    31261 tttctcattc tactgccccc actgttacga ttttgagcta aattacaaaa ttccaagcca
    31321 aatcaaagcg aaattgcctg cagacagcaa attagtgcaa tatcacgtca atttcttagg
    31381 tcgccaatct gaaaacttaa cccgtgcttg ggcattggca atggcattag gagcggaaga
    31441 taaagtaaaa accgccttgt ttgaagccgc tcaaaaagat gcgtttaaat caatggacga
    31501 tattcgtgcg gtcttcatcg ctaacagcat tagtgcagaa cagtttgaca gcggtatcaa
    31561 cagctttgca gtaaacggtt tagtcaataa acaagttcaa ttagctgaag acttccaaat
    31621 tcgtggtgta ccggcgtttt tcgtgaatgg tcaataccag cttaatctag aaggattttc
    31681 cgattcaagc tcgaccaatg attttatcca acgctatatt gacgctgtgg tcttcttgag
    31741 taagaaataa tcgtccccat attaaggaga tggttttaca agtgctgaat agtaaagcta
    31801 ttcagccttt tttatatgca aactcggaga acaaaatgac aaacttatcc attctcaacc
    31861 ttgtgccgat tcgtgaaggg caaactgcca aacaagcggt cgattctatg gtgaaattag
    31921 caaaacacgc agaaaatatc ggcattgaac gctattggat tgccgaacac cataatatga
    31981 aaaatcttgc cagttccacc acgcaattat tgattcaaca cgccctctcc cacaccgaaa
    32041 aattaagagt cggctccggt ggcgtgatgt tacccaacca cagcccttat attgtggcag
    32101 aacaatacgg cacgcttgaa acactctacc caaaccgagt agaactgggg cttgggcgag
    32161 cccccggcac cgatatgcga accgcctctg ccttacgccc agagtttgcc tttccccgat
    32221 gaaatcagcg aattaaaagg ctactttgac ggtacaaacc ctgtttccgc ctatccggca
    32281 caagggctaa atgtgccgtt ttatattcta ggctcaagcc ctgaaagtgc ctatttagcg
    32341 gctgaacgag gcttgcctta cgccttcgct tcacactttg cccctcgctt tatggacgat
    32401 gcaatccgca tttaccgctc acattttaag ccctctgatg tgttagataa accttatgtg
    32461 attttaggtg tgaatgccat tgtggcagaa accgatgaag aagcaacaca actggcgacc
    32521 acccaaaccc agtttttctt aaatgtagtg accaatgccc aacaaaatct gcaaccaccg
    32581 ctcgaatctg acgacaaagt gtgggaaaat tttgtgaaag cagaaattgt gccgcatttc
    32641 gggccggttg cctttgagca aaatgctcta taccgacaag agaaaaccgt tgtccgccaa
    32701 atgaccgaat gctccttaat tggtagcccg caaagcgttg aacaacaact taaagcccta
    32761 aaagcacgag tggaaattga tgaaattatg gcggtaaact acattttcga tgagcaaaaa
    32821 cagcatcaat cctacacttg gttaaaacaa attacggata aggtgtaata tgagcaaaac
    32881 gatgcaacaa aaagcggctg aggcacataa tatgtgccgg ctaaaaggcg attctatgtt
    32941 ggataatgca gaccgccaaa ttgcctttga agcggtgtat gagagcgaag aactggctca
    33001 acaagcggtc gaatttttcg cacaaaaagc aaaatcggtc gaaaccgaac cttgtgaaat
    33061 tcaaagcgaa attacacaaa ttgcagaagg gtttctgatg aaaatgtgga tcactttcag
    33121 ctgccaagca gaagtgattc tgttccaaat ggcagtaagg tagatataaa caagcggtta
    33181 tttttgatga aatttttgca aaaaatcttc agaaaataac cgcttgtatc attatgcctg
    33241 tttaaccgca gccgattcac tacttggttt acgccgttta ccgatatttt tggtatcttt
    33301 gtggcggact tttacttttg gttttgccgc ttcttttttc gcctcttttt tcttcttaat
    33361 gcgtgctttt tctttcttgc tggtcacatt tagctcgcca tctttcgggg ctttggtgcg
    33421 aggctctaag ccctcgataa tgcgaggttt tagtacttct tcggtgtaac gtttaatttt
    33481 gccgagtaat ttataatcgt gagcttccac caatgaaatt gccgaacctt ttttgccagc
    33541 acgagcggta cgcccaatac ggtgcaagta agtatccgca ctataaggta aatcgtagtt
    33601 cagcacgaaa tcaatatcgt ctatatcaat gcctcgagcc gccacatcgg ttgccactaa
    33661 cacattcact acgccttctt ttaaacggtt aatagcttgg ttacgttggg tctgagccat
    33721 ttcaccttcg agataagtag aacgaattcc ccgcttacgc aaggtttcgc tgagttctcg
    33781 cacatcttct cggcggcgga caaacacaat cgctctttcc accgaaaatt cgctgataat
    33841 acgagctaat aatttggttt tatgctctac attatcggcg tggtaatacc attgctgaat
    33901 ttttttacgc tcacggcgac ttggttcggc atcgacttta atcggatcat ttaataatcg
    33961 ctcggcaaaa tcctctaata actcgccctc gagggtcgct gaaaacaacc aagtatgctt
    34021 acgccaacgg gtttctgccg caattttctc cgcatcttgc ccgaagccca tttgcaacat
    34081 tctatctgct tcatcaaaaa tcagcacttc caccgctcgg cagtcaaaat tttcctcttt
    34141 aatgtattgc attaaacgac ccggggtagc aaccacaata tcttgatttt tattaaagac
    34201 ttcaccgtga ttttgatacg ccaccccacc ggtaatagtc gcaatgctca actgagtaaa
    34261 tttagccagt gcttgggctt gctccgccac ctgcattgcc agctctcggg ttggggtaag
    34321 aattaaaatg cgaggagccc ctggtttgcg gcgaggataa tctaataaat gctgaattgc
    34381 cggcagtaaa aaagcggcgg ttttgccggt accggtaggg gctgaaccga gcagatcacg
    34441 tccttctaac gcagccggaa tcgtggcttg ttgaatagcg gttgggcggt tatagccttt
    34501 gtgtgctaag gctttaagta attgagggct taaatcaagc tcctcaaacg tcattaattg
    34561 ggtcatctct gtttctctac ttgtaaattt gccccagtat atcacattaa ctgcttgccg
    34621 tgatggtgaa gaaatttatc ctaaaaggtt gaaaaaattg ttacacttac acagagccgt
    34681 ttaacggaca attcgctcac ttttacttta tagaaggaac attatatgtt tgttgaaatt
    34741 tatggacgtt tatcttgccc atactgcgtg cgtgcaaaaa cattagccga gaaaatgaaa
    34801 caagaattaa gcgattttga ttttaaattt attgatatga tcgctgaaaa tatttcaaaa
    34861 caagacctag agcctcgtgt tggcaagccg gttgcaactg taccacaaat ttttgtggat
    34921 aataaccacg ttggcggttg caccgatttc caagcctttg tggaagagaa atttgggatt
    34981 accgtatagc caaaagcccg ctaacaagcg ggctttttta tacaaaaatt tgcaaattat
    35041 tgttcttctt tcggcagacg tttaatcgca aaaagtaaac cgccccagat aatcgtcatt
    35101 gccaccacca tggtaataat tgctgctgaa ctcattactc atctcctttt ggttcatttt
    35161 tccacgccat ttttgatagc aaataagcca ccaccactaa gccgattgcc attccccagc
    35221 cgaaggtgtt tacaaaccag cttgggtagc cttcataacc ttcacgatac actttggcga
    35281 tttcgctgaa taacataaat gccagtacgc cggaggtaat aacgatacat aaacgccaga
    35341 taaagccgac tttgaatgaa gaaacttcgt tcaggtgttt ttcaagggtg cttaatttct
    35401 cgctggtgac aatcgcaatc aaggaaacaa acgccaccgc aacaataccg aattggttta
    35461 cgaatttatc catcacatca agcattggta aaccggtggt tgtaccgaat agcaagacag
    35521 ataccaccat catcggaatg ccgactagta gcgtggcttt cacacgacct gaattgagtt
    35581 tgtcttgcac cgctgaaata atcacttcaa ttaccgagat aaatgaggtt aatgccgcaa
    35641 aggtgagtga accaaagaac agcacgccaa ctaatgcccc cattggtgct tggttaataa
    35701 tggttgggaa agcgaagaat gccaagccga taccgccttt tgctacctcg ttcacttctt
    35761 gccctgcagc cgttgccata aagccgagtg ccgcaaatac gccaataccc gctaataatt
    35821 caaaaccact gttcgcaaaa cccaccacta agcctgaacc ggttaaatcg gtttcttttt
    35881 tcaggtatga agcataggta atcataatcc cgaagcagat agagagtgag aagaagattt
    35941 gaccgtaagc ggcaatccac acacttggat cagccaattt ttcccagttt ggggtaaata
    36001 acgcatctaa gcctttcgca gcacccggta gggttaatga atagccgacc aacactaaga
    36061 acatcacgat caactgcggc attagcaggt ttgaggcagc agaaatccct tttttgatcc
    36121 ccatagccaa cacagcaata gcaatcagcc ataccgcaat taacggccct gtaaccatac
    36181 cgacaaattc aaagctcacg ccttgagtaa tatcgcccat ttttaagaat tcaccgataa
    36241 agaaatccac cggtttatcg ccccacgctc cgctgaatga gaagtaggtg taacttgctg
    36301 cccagccgag taccaccgca taataaatcc cgatgatcac gttgatcagc acttgccacc
    36361 aaccgaaggt ttcaaatttc gagctgaaac ggcggaaagc gagcggtgca ccaccacgat
    36421 atttatgccc gatagaataa tctaagaaca gcagcggtaa acctgcggtc aaaagggcaa
    36481 tgatatacgg cagaataaaa gccccaccgc cgttttcata agtagtataa gggaaacgcc
    36541 agatgttccc taagccgaca gcggaaccaa tagccgccat aataaatgca ccacgtccgg
    36601 agaacgtttc tctttgcggt gcgtttgatg attgattaga cacggtaaat acctcaaact
    36661 gataaagttt tatataaaaa agaattgagt taaatgtaaa ttaatcacac tttaagtgcg
    36721 gaatatgccc aatttcaggt tgaatgtaaa gtagaaaaat atagaaaaac agataaaaaa
    36781 cgctcaattt tcaatataaa actccaaata aaaacaaaaa ttcaaacaaa aaaactaaaa
    36841 acaagacatc ttcagttaaa tataaataaa aacctaaaag ctaccagcat aattatttat
    36901 attaaaatta acaaaaaaat aacacattat ttgtacaaat aatgtgttat ttactttctt
    36961 ttttcttaaa attaggctga atcttgctct ttttcaattt tcggtgaaag atgttcaact
    37021 ttcgcttgtt taaccatatt ttcactcact tcaagaatca tcactttcaa gttgtagagt
    37081 tcaaattcca ttccttcatc aggaattttt tctaaatgct ctaaaatcaa gccgttaaag
    37141 gttctggctt cctcaagcgg taaatcccaa tcaaatagtt tgttcagatc acgcaggttg
    37201 gctgagcctt caataatcac cgtaccatct gattgttgct gaacttcttg ctcaagggtc
    37261 ggtgctgatg aagtcgtaaa ttcacccaca atttcttcta aaatatcttc aagagtgact
    37321 agccctttaa tatcaccata ctcatcaacc actaaaccaa tacgctcttt attcgcttta
    37381 aagttcatta attgtgtagt gagtggtgtg ccttcaggaa taaaatagac ttcatctgtt
    37441 gcacgcagta gcatttcttt ggtaaattcg tttttctcca acattaaacg aaaggcttca
    37501 cgcacccgca aaatcccaac aatattgttg tccatatccc ctttgtagat aatcacccga
    37561 gcgtgagggg cgtgattaag ctgacgcata atcgctttcc agtcatcatc aatatcaatg
    37621 ccgctgatgt cgttgcgagg caccataatg tcatcaaccg tcactttttc catatctaaa
    37681 atagagacca acatttcacg gtgttcggca ggaataaatt taccggcatc aagcactaca
    37741 ctacgcagct cttcggagct taagccttgt ttatcttttt gttgaatccg caataatttc
    37801 atcagcccgg caataatcaa attcattaaa aatacaatcg ggctgagtaa ttttttaagc
    37861 ggtgttagca caaagctggc gaaaaaaccg actttttcag ggtaaattgc cgctactgtt
    37921 ttaggtagga tttccgaaaa aaccaacatt acaaaagtta gcaaaccggt tgcaattgcc
    37981 acaccggctt caccggataa ctgcataccg atcatcgttg caatcgcaga ggcggcaatg
    38041 ttgactaagt tattacaaat taagataagg ctaagtagca catcggtgcg tgccaagagt
    38101 ttttccgcca gtttcgcccc tttatgccct tgctcggcaa ggtgacgcat tttgtagcgg
    38161 tttaaagaca tcaagccggt ttccgagcct gaaaaaaatg cagagagtac taaaagaata
    38221 gctaaggtaa taaataaact actcagggga atactgtcca aaattcaatt cctatgtaaa
    38281 ttaatcataa aaggtagcgt aacactaaaa gcgttgtcac tacctcactt tgtcggttca
    38341 gccgacttgc aaaaaatttt gcttttttga ccgcttgtag atcattaatt gacgatcaaa
    38401 cgactaccga aatagccgat ggtgagcaac atcatacccg aaatcgaata aataagcacc
    38461 cgttttccac gccaatgtaa tttccactgt ccaagtaact gaatgctata aacaagccaa
    38521 gctaaaaagg agaaaattgc tttatgaata tgctccggct cgaaaaagtt atgcaaataa
    38581 accacaccgg aaaataaagt gagcgtcagc atagcttgtg cagctaaggt taaagtaaag
    38641 aaatggcgtt caaccgtcat tagcggtggt agaatctggc aaaagaacat tgttttgctc
    38701 tttagttttc tatccagcca tttgagttga aaagcataaa ttaatgctaa aaagaagaga
    38761 gcataagaaa ataatgcaat ccctaaatgg aaaagcagtc ccgcattttc ttgcacatta
    38821 cggataaaac taccttttac aaatccagcc acccccacac tacaaatggc gaaagagtac
    38881 acaataatta aaggaaacca aaccgttttc cattttaaca acgcaagtgt gacacaagcc
    38941 gccataatga aactcatcaa agagattaca tttgttaccg taaaattctg cccttcgatt
    39001 aaaaataatt cattatataa cacagaaaaa tgcaaaatcg tggcaagtaa cccaaaccca
    39061 aagactaaca tcatattagg ctttttatta actgttgcgg cattttctaa attcactaga
    39121 gtaggggcaa cccaaagtag cgctagagcg taagcaacaa tggataaaag aggaagtaac
    39181 atattgtctc gaatctcgtc aaataagaat aactatcaga attttaatca aaagtaaccg
    39241 ttttagctag tttttgctgt tgctagatca aaaattatcc taaaaaatgt gcttttcgcc
    39301 ttaaattgaa ccctaccttt tctcggtaag attatctcac tgaaaacaat aattttcctt
    39361 tgactaattt gctttctatc tgtaatatgc acaccctatg caaaaggtaa aactacccct
    39421 tacgattgac ccttacaaag atgctcagcg tcgcgttgat tatgaaggct acatttcagg
    39481 taaacttcta acacgcttgg gtgaatcagt atgtaatgtg caaagtgatg cacaagtcac
    39541 tctctcgtta tatgtcgatc cacaacgcct aactgtgatt aaaggcacag caaaagtaga
    39601 tgtggaattt gattgccaac gatgtggtga cccgtttaca caaacgctcg actgttcatt
    39661 tgttttcagt ccggtgtcta acatggatca ggcggacatc ttgcccgaaa tttatgaacc
    39721 tatcgaagta aacgagttcg gtgaagtaaa tttactagat atgattgaag atgaatttat
    39781 tcttgaatta cctctagtcc cgatgcatag tgaagaacac tgtgaagtgt ccgtaagtga
    39841 acaggtattt ggcgagttgc cggaagaact ggtacaaaaa ccaaacccgt tcgcagtatt
    39901 agctaattta aagaaaaact agatctagga gaaagcccgt ggctgttcaa caaaataaga
    39961 aatctcgttc acgtcgtgat atgcgtcgtt cacacgatgc attaacaact gcagcagttt
    40021 cagtagataa aaccagtggt gaaactcact ttcgccacca cgtaactgca gacggttact
    40081 accgtggtcg taaagtaatc aacaagtaat tcctttcgag gtttatcttg gttgatatca
    40141 ctcttgcagt agatgtgatg ggcggggact ttggtccccg cgttactatt cctgcactgg
    40201 aaaaagcctt aaaacaaaat ccaagccttt cttttttatt atttggtgat gaacaccaaa
    40261 tagccccttt attacaaaaa cacacactac tcaaccaccc caaaatccaa attcatcata
    40321 ccgaacaagt gattgaagct gatgttccgt tcactactgc aatccgccaa agcaaaaaca
    40381 gctctatgcg gttagcgatt gaggcagtaa aagagggcaa agcacaaggt tgtgttagtg
    40441 gcggtaacac tggtgcgtta atgggattgg caaaattatt gattgaacca ttaccaaata
    40501 ttgaacgccc tgcactcact tcgctaattc ctaccctcaa cggcaaatcc agcgtaatgt
    40561 tagatttagg ggcaaatatt gaagtaagca atcaccagct acaacaattt gcagaaatgg
    40621 gaaacctgtt tgctcaagta atgcttgatt tagtttaccc tcgcctgtct ttattgaata
    40681 ttggtacaga agaaaataaa ggcacggcac aacttcaggc agtgcatcaa ctgctgaaaa
    40741 acagacaaga cttaaattac accggcttta ttgaaagcga taaattaacc agctatctca
    40801 ctgatgtgat tatttgtgac ggctacaccg gcaatatcgc gttaaaagcg ttggaagggg
    40861 cagctaaaaa tattatttct ctctttaaaa aagagaaagc cgattccaat atttgccgta
    40921 acaccaaacg atatttactg aaagcgatgt tctaccgtta ctaccgcaaa ttgcaacaaa
    40981 ttaaccctga ccgccataac ggtgcgacct tgctcggctt atctaaagta gtcgtgaaaa
    41041 gccacggcgg ggcaaatatc aatgcctttt attacgctat tgattatgcg gtgcaacaaa
    41101 ttcaaggcga cattccaaat aaaatcctag agggtttaac ccaaaaataa gcgaactcaa
    41161 ctgttcgctt attttcattt cttgtttcac ttaaagatac aagcggtcaa atttgcaaaa
    41221 aaatttaccc attcaaccgc ttgtgtttag ccttttaatt ttgccactcg taaactaacc
    41281 gcattgcggt gtgcatctag caattctgca cttgccattc gttccaccgt ttcggccaag
    41341 gctagaaagc cttgtggtgt cagctcctgc accgtcattc gcttgctaaa atcagctaaa
    41401 cctaagctcg aataggtttt agtgtagccg taagtcggta aaacgtggtt agtgccgcta
    41461 gcataatccc ccatactttc cggcgaatac gcccctaaga aaatcgagcc ggcattatct
    41521 aaatccgcca acaacgagcg agcattttca gtttgcacaa ttaaatgctc gggtgcatat
    41581 ttattactaa tttcgaccgc ttgttgcagg ttttccgcaa taaaagtgcg actgtgagcc
    41641 aatgctttac gggcagtttc ggcacgaggt aaaaccgcca cctgcttttc taattcttca
    41701 tcgactgccc ttgccaagct ctcacttggt gtgactaaaa tcacttggga atcggctcca
    41761 tgttctgctt gagagagtaa atcgctcgcc acaaatgcag ggtcagcaaa ctcatcggca
    41821 atcaccaaca cttccgacgg gcctgccggc atatcaatcg ccgtgccttc ttgcacaact
    41881 tggcgtttcg cctccgtcac aaacgcattg cccgggccga aaattttatc cactttcgct
    41941 accgtttgtg tgccatttgc catcgcaata atcgcttgag cccccccaac tgcgtaaatc
    42001 gtttccaccc cacacaaatg ggcggtgtag agaatttcat cggcaatcgg cggtggtgag
    42061 caaagcacaa tcttgttaca accggcaatt tttgccggca ctgcaagcat taacacggta
    42121 gagaaaagcg gggctgaacc gcccggaata taaagcccca ccgcattaat cgggcgagtg
    42181 atgacttggc aacacacccc cggctgggtt tcaatatcca cctcttgatt ttgctgtgcc
    42241 ttgtggaaag cctcgatatt cgctttcgca ttttgaatcg cttgcttaag ctctggtgaa
    42301 atacggctct gtgcttgctg aatctgctgt tctgatacaa ctaagctctc taattttact
    42361 ttatcgaact tttcagctaa ttcaaataat gccttatcgc cgttggcaat tacattcgct
    42421 ttaatttcat taactgccgc tttaatactc tcgccaacca cctgtgccgg acgggcaaga
    42481 tattgctgct gctcagtttc tgttaaattg ttccaaatta gggtttgcat atttattcct
    42541 tttacgccaa cattttctca atcggtaaaa ccaatacgga acttgcgccc atttctttta
    42601 gctgctccat tgtttcccag aacaggtttt cttggctgac aacgtgcatt gccacacggg
    42661 tttggtcgtt agctaacggt aaaatagtcg ggttttccac accgggtaat aaagcggtaa
    42721 tttccgccag tttgtctttg ggggcgtgca gcataatata cttagattcg ttcgcctgtt
    42781 gcacaccttg aatgcgggtt aataatttat ccactaacgc ttgtttttcc gctgaaagtg
    42841 gttcttggcg ttgaattagg caagcagttg aacggtaaat cacttcaacc tcttttaatc
    42901 cgttcgcctc taatgttgca cctgaagaaa ccaagtcaca aatcgcattc gcaattccgg
    42961 cacttggagc aacttcaacc gaaccggtga gtaaaatact tttaaacggc acattttgct
    43021 ctttcatata ccgctttaat aaattggggt aagaagtggc aatcacagca tcttctaaat
    43081 ctttgatatt gttataattt ttatcacgat caatagctaa cgataaacgg cagccaccaa
    43141 aatctaactg acgaagtttt ttataggcaa cattctcacc agcacttaat cgccctaatt
    43201 ccacttcctc taatacattt tcaccgataa tcccaagatc aactacgccg tcaaaaacta
    43261 agcctggaat gtcgtcatca cgcacccgta aaatttcaat cggcatattt tctgaatagg
    43321 caatcaggcg ttgatcgttc caaatgattt tcacgccaca ttgtttaagc aactcactac
    43381 attcttggct taagcgacct tttttctgca tcgcaattct taatcgattt tgtgttgtca
    43441 ttgttgtttc cttcttatgt tttaaattgt aaaaataaaa aaacctctcg aaatcacttc
    43501 cgagagggtt aaatttatgc tgcgtttagg cgtactcgga agtcttatct tccgcacata
    43561 ccaaatgccc gaaagattat tcaggtaaat gatggtggtg atgagtacga ataaaagcca
    43621 ttttgttgtt ctccaaacta aattgcttta aaagatacgc ttaaattttg gcaatgacaa
    43681 gtgttttttg cgaaaaaatt gctatttttc atctctctaa aacaactatc gcaaacgttt
    43741 gcgtaaagcg gtataatttg cctgattttt tgcaaattca acaaagtagg aataacacta
    43801 tgcaaatcag cctcaaaaag atctactccg gcaaagtccg tgatctctac gaaatcgatg
    43861 aaaaacgtat gcttatggtt gccaccgacc gattatctgc ctttgatgtt attttagacg
    43921 atcctattcc tcgtaaaggc gaaatcctca cccaaatctc caacttctgg ttcaacaaat
    43981 tagcccacat tatgccaaac cacttcaccg gcgacagtgt gtttgacgtg ttaccgcaag
    44041 aagaggcaga agctattcaa catcgtgcgg tggtttgcaa acgcttaata ccggtgaaaa
    44101 ttgaatcgat tgtgcggggt tatttaaccg gctccgggct gaaagattac caacaaaccg
    44161 gcacgatctg cggcttaaca ttgccggaag gcttggttga ggccagcaaa ttaccgcaac
    44221 cgatcttcac accgtccagc aaagccgagg tgggcgatca cgatattaat atcagctacg
    44281 aagagtgtga acgccagatc ggtcaagaac ttgccgccaa agtgcgtgat gccgctctaa
    44341 aactctacac tgaagcggca aactatgccc tgaccaaagg aattattatt tgcgacacca
    44401 aattcgaatt cggcttagac gaaaacggtg aactaacgct aatggacgaa gtcctaaccc
    44461 cggattccag ccgtttttgg tcagttgaaa cctaccgaga aggcacaaat ccaccttcat
    44521 ttgataaaca attcgtgcgt gactggctgg aaaatagcgg ttggaacaaa caacccccag
    44581 ccccgaaaat accggcagag gtaattgaaa aaaccgtagc gaaatatcaa gaagcattgg
    44641 atttattaac caaataacac cacaagcggt caaatttacg ctattttttg caaaacaaaa
    44701 acctgtaagc caacacttac aggtttttta gttagtggta aaaagtgcgg ttattctacc
    44761 gcacttttgc aaaattttgt gtaaatctga ccgcttgtta gccttgcgaa gaaatacgtt
    44821 tcatatctgt catataacca cgtaattctt gaccgattaa ctcgattggg tggttacgga
    44881 ttgcgtcatt cacatcacgt aaggtaacgt tgtcgatttc cactgccgga gttggttcac
    44941 ctaaatcgcc tttctctaac gttgggataa ttttctccgc taaaatcggg gttgcaacgt
    45001 gagagaataa gtagttaccg tattctgcgg tatctgaaat taccacgttc atttcatata
    45061 aacgcttacg agcgattgta tttgcgatta acggtaactc gtgtagagac tcgtagtaag
    45121 ccgattcttc ataaataccg gctgaaacca ttgtatcaaa ggctaattca acccctgctt
    45181 tcaccattgc aaccattaac acaccgttat caaagtattc ttgctcagaa attttaatac
    45241 cgtctgcttg tggtgcgttt tcaaaggctg ttttacctgt ttcttcacgc cattttaata
    45301 agttggcatc gccgtttgcc cagtctgcca tcatcgttga tgagaactca ccactgatga
    45361 tgtcgtccat atgtttttca aataagaacg ctaattcttc tttgatttgc tcagaaagct
    45421 cgaacgcacg caatttggca ctgtttgata agcgatccat cattaaggtg ataccgcctt
    45481 gttttaacgc ttcggtaatg gtttcccaac cgtattggat caatttacct gcgtaagccg
    45541 gatctttacc ttccgacact aatttgtcgt agcacacgat tgaacctgct tgtaacatac
    45601 cgcaaagaat ggtttgttca cccattaaat cagatttcac ttctgctacg aatgaagatt
    45661 ctaatacgcc cgcacggtca ccaccggtag cacttgccca cgctttcgca atggctaaac
    45721 cttcgccttt agggtcattt tccgggtgaa cggcaattaa ggttggcaca ccgaaaccac
    45781 gtttgtactc ttcacgcact tccgtgcccg ggcatttcgg agcggtcatc acaaccgtta
    45841 aatccggacg aatttgctca ccttcttcca caatgttgaa accgtgtgaa taaccaaatg
    45901 ccgcaccttg tttcattaac ggcattacat cggcaactac tttagagtgc tgtttgtccg
    45961 gcgttaagtt aatgactaaa tccgcttcag gaattaattg ctcgtaagta cccaccacaa
    46021 agccgttttc agaagcacgt ttaaatgaag cacgtttttc agcaatcgct tcggcacgta
    46081 aagcgtaagc aatatctaag cctgaatcac gcatatttaa accttggttt aaaccttgag
    46141 caccacaacc cacaatcacg atttttttgc cttttaagaa attgcagcca tctgcaaatt
    46201 catcacgatc cataaagcgg caacgaccta actggtctaa tttttgacgt aaatttaaag
    46261 tgttgaaata gttagccatt ttttaatcct tatttgaatt aatgagattg atatgatgtt
    46321 ttgtttgcac attgttatag tttgatttga ttatacctta acctaacatt gcgtaaattg
    46381 aaaatattaa tatttcatat tgcataaaat gcaacttgca aaaattttgc caaatttaac
    46441 cacttgcaat ctctacgata aagtagaaaa taaccaccta atttaataga agatcaaaaa
    46501 atgaaaataa acagaatcat tttacaaagc tgtagcgaat gtgggcaaca agtgcgagtc
    46561 ccgctcacgt caaatggcaa tgccgtttgc ccggtctgcc ataatatatt acgcaaaagc
    46621 aatacttgga gcttgcaccg tagtgctttt ttggcattag ccattttaat tttgcttccc
    46681 ttcgcactta cttttccctt gatgagcatt gacttactcg gcatcaaaat taatgctacc
    46741 gtatgggacg gtatttggaa gatggcaacg gagggctacc cttacaccgc ttttatggtg
    46801 ctagtctgcg cggtaataat gccgattgca tttgtattgc taattttaac cattcagcta
    46861 caacgtatta ttcgccaacg cccccgttac acgctgattt tcttaactaa aataaaagaa
    46921 tgggtaatgc ttgatgtcta tttagttgct cttgcggttg ccgcttttaa aattcgagat
    46981 tatgccgatc tacaattcga tatcaactta atcgcctttg tgttggtaac actcttaaac
    47041 accctacttt ttattaaaac cgagccaaaa caagcatggg aacgttttta cccagaatat
    47101 cacgccttgc cgtttgatca cccaagcaat ccaacacttt gcccgacctg tgaatattgc
    47161 tttgatgaaa ctattttaga cttaaaagga cggcaacgct gccctcgttg tgaaagcaat
    47221 ttatctattt ccgacaacgt aaaaatacaa cgggtttggg cttgcttaat tgcagggact
    47281 attatgatga ttccggcaaa tattttcccg atttcgacaa ctgaactggc aggtcaggtt
    47341 tcggcagatt cattaatgtc cggcgtgctt ctgtttatgg aaatgggtag ctacaccgtg
    47401 gcagcgattg tgtttatcgc tagtattgcg gtgccggtga gcaaaattac cattattttt
    47461 tatctcttgc tggcaattca ttacaagtgg aaacacccga ttcattggca aatgaaacta
    47521 ctacactacg tccattttgt cggacgctgg tcaatgctgg atttattcgt gttatcattg
    47581 atgatgtcgc tactcgaacg agggcagatt ctcagtttct cggtagggga agccgctttc
    47641 tattttggag cagccgtatt cttaacgatg tttgcctctg caaatttaga ttccagaatg
    47701 ttgtggaaga ttcatactgt ccagaaaaca tcctaaataa agattttccg ataaataata
    47761 cataacatgc aaagtaagaa aagtagtacg taacccaaaa tctcaatccc tattgagtaa
    47821 gaaagagccg ataatgtagc accgatagcc agaaagaaat tagcaaatat aaaatagtct
    47881 ttactatatt tacttgaggc aattagggta tccattgcag tactaaagaa catttccaaa
    47941 tacgtgacac ccactaatac aataaataat gttactatat tttgtgaaat aaacataaat
    48001 aagccactta atataataca aataataaaa gataaaatta gagaaaattg atgtgttatc
    48061 ctttttgtta cagatttata taatcttatt tgtaatagag cgatagcaat actatttaaa
    48121 ataacccaaa taggatataa attaaaatta ccccattgtt ttaagatagt tggtatcagt
    48181 tgctcataca acaaataaca catactgaat aatatatagg aaagaaatac aaaaacaaag
    48241 aaatctttat caaaactctt aaatgatata aaaaaccttt cctttctaat tgctatctta
    48301 gcatttactt taagtgaaaa taatgtaaat aagatagata tcaccagcat aaaaagaaga
    48361 taactattaa tatctaagaa taaataaaat aataacggtg ataaagcaga ggctatatta
    48421 tgtatagtat atctaattga gaattcataa gaaatatttt ttgctgtttg ttgaacatat
    48481 aatttataag gtatagagaa aagtatgccc cctagacaat ttatcaaaat aaatgccgtt
    48541 aaagatatga ggctctgttc caaataaata ataataactg caataatctt taatataccc
    48601 gacaatacaa ataagtacct tatttgagtc tggttaaaaa tataaataga caatgaaaaa
    48661 agcataatcg cccaaaattt aacagatacc aagaatgata cctcatgagc atttatacca
    48721 ttatccataa aaaagaaaat agcaaaagca attaatgtag atgagaatat tgaattaaag
    48781 aaaactaaca ttctcatcat aatttcagat tgattaaagt ttccaagttt tggcaatttc
    48841 atttaaaatt ttctcaccaa tctctgtcgt ttttgcattt tctctaacag tctggtatgt
    48901 ttcatgtaac ttcaacaggt tatcatttaa tctatggtta aattcatcat aataaacatc
    48961 atctatcttt tctttcattt tttgaaagga ggaacatatt ctatggagta caaacaacgc
    49021 atgaaatagc ccaatcatag gacgagtatc ctttcttaaa ggtgctttaa aacgttcatc
    49081 agctgaattt gttactaatt catcagttgc atttataatg ttaagagctg tatgagcaca
    49141 tt
//
LOCUS       DANLXO010000006        44952 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.006, whole genome shotgun sequence.
ACCESSION   DANLXO010000006 DANLXO010000000
VERSION     DANLXO010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 44952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44952
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.006"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            25..918
                     /locus_tag="PXD69_000254"
     CDS             25..918
                     /locus_tag="PXD69_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HDL6282496.1"
                     /translation="MNKKLPPLNALKAFESAARHLNFTKAAEDLFVTQAAVSHQIKLL
                     EDFLGASLFHRRNRLLELTELGAQYFYEVQPLLEQIALATDKIRQQSSRQILTISVPQ
                     TFGMHWLVPRLADFHEKYPEVEVRIKGVDQDEGLLGKETDVAIYYGKGDWQGLESIRL
                     TESRIVILASPEYLSQNTIHLPADLAGKHLLHSSTHNKWKRMVEHLHIEDIVDAETGS
                     IFSHTFMVLQAAMHQQGIAIANQLLAQHEIEKGTLIEPFPTTLFDEKSFYVVYPSQSA
                     QVQKVQFFVEWIQQKMKECCA"
     gene            994..1677
                     /gene="yjjG"
                     /locus_tag="PXD69_000255"
     CDS             994..1677
                     /gene="yjjG"
                     /locus_tag="PXD69_000255"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HDL6282497.1"
                     /translation="MKYQWVLFDADETLFSFNSYLGLKAMLARYQIDFSEQDYQDFQA
                     VNKPLWVAYQNNEITAQDIQTRRFVKLSAQTGVDPLQLNQELMAEMAFVSQPLEGVMD
                     MLNALYGKVKMGIITNGFTDLQQKRLDNTQTSHFFDIVVISEQIGAAKPDRQVFDYAF
                     ALMDEFDRTKVLMVGDTLASDILGGNNAGIDTCWLNLLSKENDTDIKPTYEVHTMQQI
                     IAIVEGKSL"
     gene            1674..2657
                     /gene="cysB"
                     /locus_tag="PXD69_000256"
     CDS             1674..2657
                     /gene="cysB"
                     /locus_tag="PXD69_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HDL6282498.1"
                     /translation="MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESEL
                     GINIFERNGKHVKGLTPAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGILRIATTNT
                     QARYMLPSVIEKFKARYPEVSLHLHQGSPNQIYDALVAGEVDLAITTEAQYLFDEAVL
                     LPCYWWNRSVIVKPEHPLAAFVNQSKNLTVEQLGRYDLITYTFGFTGQSDLDHAFNKE
                     GILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTETDKDLVAINASHLFQPSMTQIA
                     FKRGTFLRNYMYDFINYFSPHLTRVQVEKAEQLRDNNAISRLFESISLEEK"
     gene            2658..3302
                     /locus_tag="PXD69_000257"
     CDS             2658..3302
                     /locus_tag="PXD69_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282499.1"
                     /translation="MRIWQKLASVIVVTLGLISNASAENFKLKYSSNYLMPAYINFNN
                     GGGQYNIQAKINVPLYNIVFSAKGTEKNEQFHMLSYRDTRNGKTYAMAEIDSKTVKYG
                     KVKEPLKEEALTMPTYDLFTTAFQLSYYDKLPSSFQTTNGKKLYPTPNVQLRKAQKEV
                     KVGGKTYQEITYKFRTSDKKDITVKKFEGEKFPRYIAYSRDGDNYELTFDSFVK"
     gene            complement(3376..4425)
                     /gene="ansB"
                     /locus_tag="PXD69_000258"
     CDS             complement(3376..4425)
                     /gene="ansB"
                     /locus_tag="PXD69_000258"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HDL6282500.1"
                     /translation="MKIKKLLLPTLLSIATMPIQAADLPNITILATGGTIAGSQKNTA
                     TSAYQAGQLNIETLIEAVPDIKKLANIKGEQIVKIGSQDMSDEVWLKLAKAINQQCPN
                     TDGFVITHGTDTMEETVYFLDMTVKCEKPVVLVGAMRPATEKSADGVLNLYNSVVVAK
                     DSKSSGRGVLVAMNDIVLGARDVTKTSTTSVQTFNSPNFGALGYIHNSKVDYERSPES
                     KHTVNTPFKVDELTELPKVGIIYAYSNMPTEPLQALLDASYQGIVVAGVGNGNMNAAN
                     LALLEEAAKKGITVVRSSRVPTGYTTRDAEIDDSKYGFIASGTLNPQKARVLLQLALT
                     QTNDIKTIQQYFEDF"
     gene            4689..6326
                     /gene="pyrG"
                     /locus_tag="PXD69_000259"
     CDS             4689..6326
                     /gene="pyrG"
                     /locus_tag="PXD69_000259"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HDL6282501.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLASILEARGLNVTIMKLDPY
                     INVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRSKMSKANNFTSGKIYSEVLRK
                     ERRGDYLGATIQVIPHITNEIKARVLEGGKGRDVAIVEVGGTVGDIESLPFLEALRQL
                     AVDIGREKTLFMHLTLVPYIPTAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAIPE
                     NEKKKIALFCNVPERAVISLKDVDSIYRIPELLKSQGLDSFVCDRFRLDCKEADLSEW
                     EQVLYCQANPTGEVTIGMVGKYVELPDAYKSVNEALKHAGLTHRLTVNIKYIDSQDIE
                     TKGTELLAGLDGILVPGGFGYRGVEGKIRTAQYARENKIPYLGICLGMQIALIEYARN
                     VAGLTEANSSEFDKDCSQPVIGLITEWQDAEGNVETRSDESDLGGTMRLGSQQCHLIE
                     GSKARELYGAETIVERHRHRYEVNNKLLPQIEAAGLKVSGLSADRKLVEIIEVPNHPW
                     FIAAQFHPEFTSTPRDGHPLFAGFVKAAKDHQESRKA"
     gene            complement(6494..7090)
                     /gene="nfuA"
                     /locus_tag="PXD69_000260"
     CDS             complement(6494..7090)
                     /gene="nfuA"
                     /locus_tag="PXD69_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HDL6282502.1"
                     /translation="MEEQTIHISISDAAQAHFARLLEQQEEGTNIRIFVVNPGTPGAE
                     CGVSYCPPNAVEETDTEFKFNRFSAFVDDISLPFLDEAEIDYVTDPMGSQLTLKAPNA
                     KMRKVADDAPFIERLDYVIQTQVNPQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSM
                     VDVTLKEGIEKQLLAMFPDELVGVKDITEHQHGEHSYY"
     gene            7537..8895
                     /locus_tag="PXD69_000261"
     CDS             7537..8895
                     /locus_tag="PXD69_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HDL6282503.1"
                     /translation="MITIKKGLDLPIAGKPEQVIHNGNTVTEVAMLGEEYVGMRPSMK
                     VREGDVVKKGQVLFEDKKNPGVVFTAPASGTVTAINRGEKRVLQSVVIKVEGDEQITF
                     ARYEASQLASLTSEQVKQNLVESGLWTAFRTRPFSKVPALDAEPSSIFVNAMDTNPLA
                     ANPEVIIAEHQQAFFDGLTVLSRLFESKKVIHLCGSADSNILNAAQSRQINNVETNRF
                     KGPHPAGLSGTHIHFIDPVGATKQVWYLNYQDVIAIGKLFTTGELFTDRVVALAGPQV
                     KNPRLVRTRLGANLSQLTANELNAGENRVISGSVLSGAIATGVHDYLGRYALQVSALL
                     EGREKAFFGMIAPYSDKYSITRTTLGHFAKKLFNFTTAVHGSERAMVPTGAYERVMPL
                     DIIPTLLLRDLAAGDTDSAQALGCLELDEEDLALCTFVCSGKNNWGPLLRQALDKIEK
                     DG"
     gene            8898..10133
                     /locus_tag="PXD69_000262"
     CDS             8898..10133
                     /locus_tag="PXD69_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HDL6282504.1"
                     /translation="MGLKNLFEKMEPAFHKGGKYEKWYTLFEAAYTIFYTPGTVTRKD
                     AHVRDAIDSKRMMLIVWLALFPAMFYGMYNVGAQGILAALKMGTLTDLVANNWHYSLA
                     DSLGSVADAGWGTKMLLGATYFLPIYLTVFAVGGFWEVVFAMVRKHEINEGFFVTSIL
                     LALIVPPTLPLWQAALATTFGVVVAKEVFGGVGKNFMNPALAGRAFLFFAYPGQISGD
                     AVWVAADGFSGATALSQWAVGGQGALQHVATGETITWMDAFLGNIPGSIGETSTLMLI
                     IGAAIIVFARIASWRIIAGVMIGMAATATLFNVIGSDTNPLFSMPWHWHLVLGGFAIG
                     MFFMATDPVSAAFTNKGKWAYGILIGFMCVLIRVVNPAYPEGMMLAILFANLFAPIFD
                     YLVVQGNIKRRLARVANNG"
     gene            10126..10899
                     /locus_tag="PXD69_000263"
     CDS             10126..10899
                     /locus_tag="PXD69_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HDL6282505.1"
                     /translation="MAKFNKDSVGGTLTVVVLLSLICSLIVAGAAVMLKPTQDIQKQL
                     DKQKNILQAAGLLQKDTNVQETYTKFIEPKIVDLATGDYVEGVTGFDARAAAKDPAQN
                     VVIAPEDDKANIKTRAKYAEVYLVKDESGKTTQVVLPMHGNGLWSIMYGFVAVQPDAN
                     TVNGITYYEQGETAGLGGEIANPNWQKNFVGKKLYNEQNQVALRVGKGASADKDHGVD
                     GLSGATLTSNGVDGSFKYWFGQNGFGPYLAKFKAAAGAN"
     gene            10899..11525
                     /locus_tag="PXD69_000264"
     CDS             10899..11525
                     /locus_tag="PXD69_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005717817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HDL6282506.1"
                     /translation="MADNNNLKKLLLSPIVDNNPIALQILGICSALAVTTQLQTAVVM
                     AIAVSLVTAFSSMFISMIRNYIPNSIRIIVQMAIIASLVILVDQILRAYAYDLSKQLS
                     VFVGLIITNCIVMGRAEAFAMKSGPVESFVDGIGNGLGYGAMLIIVAFLRELIGSGKI
                     FGITILETVQNGGWYQANGLFLLAPSAFFIIGFVIWAIRTWKPEQVEK"
     gene            11527..12123
                     /gene="nqrE"
                     /locus_tag="PXD69_000265"
     CDS             11527..12123
                     /gene="nqrE"
                     /locus_tag="PXD69_000265"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005529392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HDL6282507.1"
                     /translation="MEHLLSIFVKSIFIENMALSFFLGMCTFLAVSKKVSTAFGLGIA
                     VIVVLGIAVPANQLVYTHVLKEGALVEGVDLSFLNFITFIGVIAALVQILEMILDKFF
                     PALYSALGIFLPLITVNCAIFGGVSFMVQREYNFVESVVYGVGAGTGWMLAIVALAGL
                     TEKMKYSDVPAGLRGLGITFITVGLMALGFMSFSGIQL"
     gene            12134..13363
                     /gene="nqrF"
                     /locus_tag="PXD69_000266"
     CDS             12134..13363
                     /gene="nqrF"
                     /locus_tag="PXD69_000266"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HDL6282508.1"
                     /translation="MDSNFIFGIIAFTALVLVLAVIILFAKSKLVDSGDITISINNDP
                     EKGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVKSGGGEILPTELSHISKK
                     EAKEGWRLACQVNVKSSMDVELPEEIFGVKKWECTVISNDNKATFIKELKLQIPEGEE
                     VPFRAGGYIQIEAEPHTVHYKDFDIPKEYHEDWDKFDLWRYTSKVDEHIIRAYSMASY
                     PEEKGIIMLNVRIATPPPRNPDVPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAE
                     MVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSEREMFYVEDFDGLQAENDNF
                     KWYVALSDPLPGDREDYFRGFIHNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGML
                     KSLGVEDENILLDDFGG"
     gene            13475..13909
                     /locus_tag="PXD69_000267"
     CDS             13475..13909
                     /locus_tag="PXD69_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL6282509.1"
                     /translation="MEQLDITVLENAFNSLEKTIVSLENQAWFNRQEAIIQDTLIAGA
                     IQKFEFVYELSIKMLKRQLKNIESNDTDIDSTEFRDILRMAAQYGLIESPEVWLDYRK
                     MRNITSHTYDQNKAQQVYNGISNFLESTYFLVKQLQKRNSYD"
     gene            13902..14195
                     /locus_tag="PXD69_000268"
     CDS             13902..14195
                     /locus_tag="PXD69_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL6282510.1"
                     /translation="MIDLTESQRQQVLDIFKKYLPDTPVWVFGSRIKGTAKAYSDLDL
                     ALITKQPLTIRQQTELELAFTDSDLPFTVDLIDWASCNESFKQIILQRYEVLI"
     gene            14244..15278
                     /locus_tag="PXD69_000269"
     CDS             14244..15278
                     /locus_tag="PXD69_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HDL6282511.1"
                     /translation="MKKFFLLLIAFFTLSACEKAPEQITLSGKTMGTTYTVKYIDNGE
                     VENLISPEKMKNELDGLLIEVNNQMSTYQQDSEISRFNQAKQANQAVEISQDFAKVVQ
                     EAIRLNKVTEGALDVTVGPLVNLWGFGPDKRLNKVPSDEQIAERSAYVGIDKILLEMS
                     SKPKLTKSAANLYLDLSSIAKGFGVDKLAEHLETIGVSNYLVEIGGELRGKGKNLQGL
                     DWRIAIEKPVMTQGQAAQITVPLHNLAMATSGNYRNYFEDEKGNRLSHIIDPKQLRPV
                     NHNLASITVFAPTTMTADGLSTGLFVLGAEKALAVAEREKLAIFLIVKNGDKFETQMS
                     SEFSKLIQSQ"
     gene            15291..15536
                     /gene="nqrM"
                     /locus_tag="PXD69_000270"
     CDS             15291..15536
                     /gene="nqrM"
                     /locus_tag="PXD69_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HDL6282512.1"
                     /translation="METVLLTFGFFVAVIFAMSIGFIVKGKTIKGSCGGITALGMKKM
                     CDCEEPCDNLKSKIADGTADPEEVARFNKEPQFYEVK"
     gene            15538..15954
                     /locus_tag="PXD69_000271"
     CDS             15538..15954
                     /locus_tag="PXD69_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL6282513.1"
                     /translation="MNRDIRWKQRFDNYKKSVSYLQAEAEKYADTDIDVIKKGIIQSF
                     EITHELAWKLMQDILKWEGEVDIYGSKTASRLAFNRGLITQGEVWLEMIKSRNITVHT
                     DDETILTEEFNKIIKAYLPLFIEFEQRVETLCQTLD"
     gene            15936..16247
                     /locus_tag="PXD69_000272"
     CDS             15936..16247
                     /locus_tag="PXD69_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL6282514.1"
                     /translation="MPNFGLSERATKTITDILAKYPEVEQAIIYGSRAKGNYREGSDV
                     DLTFKGKDLTYDIVKRIWGDLDDSDSPYLFDLSIYHQLTNANFIEHIDRVGKVFYQRE
                     L"
     gene            16358..17521
                     /gene="mnmA"
                     /locus_tag="PXD69_000273"
     CDS             16358..17521
                     /gene="mnmA"
                     /locus_tag="PXD69_000273"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDL6282515.1"
                     /translation="MTTQLTSKTYDTHFPKLTPEQLAENSKKKVIIGMSGGVDSSVSA
                     FILQQQGYQVEGLFMKNWEEDDDTDYCTAAAELADAQAVADKLGMKLHKINFAAEYWD
                     NVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLGADYIATGHYVRRTSDDQD
                     AKLLRGLDENKDQSYFLYALNKKQIGQSLFPVGEIEKPIVRAIAEDLGLATAKKKDST
                     GICFIGERKFKDFLARFLPAQPGEIRTVEGKLVGRHDGLMYHTLGQRKGLGIGGVKGL
                     SEDPFYVVEKDLINNVLIVAQGHDNSALLSSGLIAKQLTWVDMQPLRENLRCTVKTRY
                     RQADIACEIQVIDDETIRVMFDEPQIAVTPGQSAVFYLGEVCLGGGIIESQLK"
     gene            17638..19017
                     /gene="argH"
                     /locus_tag="PXD69_000274"
     CDS             17638..19017
                     /gene="argH"
                     /locus_tag="PXD69_000274"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDL6282516.1"
                     /translation="MALWGGRFTQQADAKFKYFNDSLRFDYRLAIQDIEGSIGWAKAI
                     TSVGILTVAELEQLIAALKEVRAEVESNLTIILKDDAEDIHSWVESKLIEKVGDLGKK
                     LHTGRSRNDQVAVDIKMWCKVQAVALQERIRALQERLVSVAEENQESVMPGYTHLQRA
                     QPVTFAHWCMAYYEMLERDFSRLSDANKRMSTCPLGSGALAGTAYGIDRDLLARDLGF
                     EEATRNSLDSVSDRDHILELLSTASISMMHLSRFAEDLIIFNSGESGFLEMSDRVTSG
                     SSLMPQKKNPDACELIRGKSGRVFGALNGLLTTLKGLPLAYNKDMQEDKEGIFDALET
                     WQACLEIAELVLVDIQVNTERTREAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VYAISKKEPLEALSINEFQQFHHSIGDDVYPILSLESCLEKRCAKGGVNPQRVAEAIA
                     VAKANLASK"
     gene            19185..20183
                     /locus_tag="PXD69_000275"
     CDS             19185..20183
                     /locus_tag="PXD69_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4115 domain-containing protein"
                     /protein_id="HDL6282517.1"
                     /translation="MTESVNSTQAGTALSLGQQLKAAREALNLSITDVAQKTNLKKSH
                     IESLENDIFILQNVAPTFVRGYVRNYVKFLRLPESLISSVNYGEVTIPKEVTKVSSVK
                     PSSNSQGKTLKYLTVLVLLAALGMTLLWWWQGYQKEQENREQFVSSAPVAEVANTATN
                     NDASAQTSVPVQQPIQVSEQPAQVAETVVAAEPALTEKVEPTQAASSPVTQEDVKVVE
                     EVKQADATTAQVEAVNVLQQSQSEQAPTEQPVAVTNDELRIEITGSQSWITVRGAKNK
                     RLAEKLYNNGETLSFNENEQYRLTIGAPANVKVYYKGQEVPLKIDGRVARIHLPLQ"
     gene            20284..21396
                     /gene="ispG"
                     /locus_tag="PXD69_000276"
                     /gene_synonym="gcpE"
     CDS             20284..21396
                     /gene="ispG"
                     /locus_tag="PXD69_000276"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDL6282518.1"
                     /translation="MIHQSPIKRRVSKKIYVGNVPVGGDAPITVQSMTNTRTTDVEAT
                     VAQIKSLERVGADIVRVSVPTMDAAEAFKAIKQQVSVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRTVVDCARDKNIPIRIGVNAGSLERDLQEKYGEPTPQALLES
                     ALRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARAGSV
                     KSAVGLGLLLAEGIGDTLRVSLAADPVEEVKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EIDVIATVNELEQRLEDIITPMDVSIIGCVVNGPGEALVSDLGVTGSNKMSGFYLDGV
                     RQKERFDNAKLIDQLEAKIRARVAQQHNRIDIEQIG"
     gene            21402..22673
                     /gene="hisS"
                     /locus_tag="PXD69_000277"
     CDS             21402..22673
                     /gene="hisS"
                     /locus_tag="PXD69_000277"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDL6282519.1"
                     /translation="MAKTIQAIRGMNDCSPSESPLWQWVEQKVRNVLASYGYSEVRMP
                     IVESTPLFARAIGEVTDVVSKEMYTFWDNDEQLTLRPEGTAGCVRAAIERGWIYNNEQ
                     RLWYMGPMFRHERPQKGRYRQFHQAGVEVFGIANPEIDAELIILTARLWKELGIDQHV
                     SLQLNSIGSLEARANYRSALVKFLENHTALMNEEEKERLVKNPLRILDTKNEALQNVL
                     NDAPKLLDYLDDDSREHFTQLCALLDAMGIRYEVNPKLVRGLDYYNKTVFEWVTSALG
                     SQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVNKEIDLPKTVDVYIVF
                     SGEGATLNAFQLAEQIRSELPHVGVMTHCSGGKFQKQFKRADKVEAQIALVIGESEVA
                     EKQVVIKDLRSGAEQITIAQSELIAELSKRF"
     gene            22683..23303
                     /locus_tag="PXD69_000278"
     CDS             22683..23303
                     /locus_tag="PXD69_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDL6282520.1"
                     /translation="MSNEYLNKTEEQQFEDAKNWFKENGTPILVAIILACAATAGWNF
                     WKNHQLETAQKTSASYQSVMESYLQNPSKNQPLVEKFIADNKDSSYAAFAQFEVAKQA
                     VEKGNFSAAKTALQSVLTYSDSTLQSIARFRLAQIDFQLKSYDEALASLAQIQDKAWE
                     LRKQILTGDILAAKGDIPAAKSAYEQAKTTANPQEQTLIDVRLNNL"
     gene            complement(23366..24469)
                     /gene="dnaN"
                     /locus_tag="PXD69_000279"
     CDS             complement(23366..24469)
                     /gene="dnaN"
                     /locus_tag="PXD69_000279"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDL6282521.1"
                     /translation="MQITITREQLLKPLQQVCGVLSSRPTLPVINNLLLEIEGNRLSL
                     TGTDLEVELTTQAQLLQAVDFAGKFTIPAKKFLDISKSLPDDSVISVQFEEDKAIIKA
                     GRSKFSLATLPASDYPNLMDWKPEVDFSIDQSTLARLIDATQFSMANQDARYFLNGMK
                     FETEGNLLRTVATDGHRLAVCTMVLNQELLTHSVIVPRKAVLELSRLVASNDETVRLE
                     IGSSNIRITMNGIVFTSKLIDGRFPDYRRVLPRNADRILEAETETLKRALMRAAILSN
                     EKFRGVRLTLSNNLLKITANNPEQEEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKC
                     QRVRFSLVDSSSSCLIEDCDNSSAEYVIMPMRL"
     gene            complement(24488..25837)
                     /gene="dnaA"
                     /locus_tag="PXD69_000280"
     CDS             complement(24488..25837)
                     /gene="dnaA"
                     /locus_tag="PXD69_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDL6282522.1"
                     /translation="MEQIVSSLWSDCLNHLQTKVSPTDYSTWLRPLQASSENGELTLY
                     AQNQFVENWVKDKFLSEITELARFLAKNDNLVVTLKVGIKPTEQPKVSPNLKNESSEF
                     SNTGFKTGLNPNQTFDNFVQGRSNQLAKLVAQQVVDNLGESHCNPLSFYAGTGLGKTH
                     LLHAIGNELVKRTPGTRVLYIHLERFYRDIIKAINSSNNDAEKIKKFYRSLDVLMIDD
                     IQFLANKPKVQEEFLHLLNALFEQRKQIILTSDVLPKNIDKIDTAIKSRLSGGISATI
                     EPPELETRVAILRQKALERGADLQEDAAYLMGQKLRTNVRELEGALNRVIAWQKLTLR
                     PITVDAVRETLQDLFASFDYLITIENIQRIVAEYYGIKVADIKSKSRARSIARPRQMA
                     MALAKELTNHSLPEIGREFGGRDHTTVMHACKTINELRDTESGIQEDYIHLTRKLSS"
     gene            complement(26024..27871)
                     /locus_tag="PXD69_000281"
     CDS             complement(26024..27871)
                     /locus_tag="PXD69_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6282523.1"
                     /translation="MFEKLFKWFEARVETYPNEMPKTPKSGLIPFIYDATKGMRFYIL
                     LLTVLVAAVGIIEAVLFRFMGDLVDWVNKYSPTELWAEKGWTIIGMFFIALLAVVFVY
                     LASSIRFQSLQGVFPMRLRWNFHRLMLGQSLGFYQDEFAGRVSAKVMQTALSVRDVIM
                     TCADMLVYVLVYFTTSSVILLQLDGWLFVPFILWVISLAATIIYFVPKLAQAAQEQSD
                     ARSLMTGRITDAYANIATVKLFSHGNRESAYAKESMEGFMVTVHKQMRLVTVIETVTN
                     LTSMALIISTAGIGLWLWGSSVVTAGAIATSTALALRIKGLSQWIMWEFARLFENLGT
                     VQDGMITLSKPHNVVDKIDAKPLNVTKGEIKFENVDFAYDPKKPLLKDFDLTIKPGEK
                     VGLVGRSGAGKSTLTNLLLRFYDIQDGSITIDGQNIRDITQESLRSQIGLVTQDTSLL
                     HRSVRENLMYGRPNATEEEMIKAVEQAAASEFIPNLQDAKGRTGFDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQENLTQLMEGKTVVAIAHRLST
                     IMAMDRLIVLDKGEIVEQGTHEELLAQNGVYARLWAHQSGGFLPENTDI"
     gene            complement(27940..28449)
                     /gene="luxS"
                     /locus_tag="PXD69_000282"
     CDS             complement(27940..28449)
                     /gene="luxS"
                     /locus_tag="PXD69_000282"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDL6282524.1"
                     /translation="MPLLDSFKVDHTKMNAPAVRVAKTMTTPKGDTITVFDLRFCRPN
                     IDILPVRGIHTMEHLFAGFMRDHLNSEQVEIIDISPMGCRTGFYMSLIGSPSAEEVVK
                     AWTASMEDALHKIPDVSAIPELNEYQCGSYKEHSLKEAHQIARNVLAAGIGINRNEDL
                     ALDEKLLNP"
     gene            complement(28467..31133)
                     /locus_tag="PXD69_000283"
     CDS             complement(28467..31133)
                     /locus_tag="PXD69_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDL6282525.1"
                     /translation="MTMEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLFFQILK
                     EQGETITIRFSKGDGITAGKTAIRYQGLQIGQVKRVYFVDNLKEVEVQAEINPEAKSI
                     LRKQTKFWLVQPSASLAGVSGLDAIVSGNYITLLPGEGDFVDEFIAEEDPPAITVSDG
                     DLLIRLISDDIGSITVGASVYFRKVPVGNIADYRFTKDQKKIEIDVVINQKYAHLVKK
                     ESRFWNISGISADVNLQGIKINMDSLASVVQGAVAFDSPDNMEIAEQGQKFELYPDLK
                     SAKRGIEINVKLPLTHNLKINETGVFHQNVQIGMLSQLKLPQVKDNGVPQQESGQHKQ
                     IDGVLLIDPSYENLLRSQTKILLKEPKFSLNTEQLTKVGELLRGVYFEVHPGEGEPQS
                     EFVVQNEADYLLSLPNLLSFSLIAPQAYGVDTNQGIYYSDVQIGEIVKRSLELDKVRF
                     DVIIYPPYRNLIGSNSKFVAISNIDMSVGLDGLRVHAGSPSEWLKGGVRLINGKNDGS
                     PKKQYALYKDIESAESGMATLDKKATTTLSADSLSGISEGSLVLYRDFQVGEVLKITP
                     KQQKFEVELFIQPNYRHLLTEKSRFWIEPATSVDVSLKGVNITTAPLMRTLKGAISFD
                     DGGSKGNKTLYASKEKATSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQNA
                     KKQIKATAYIQRKYYPLIAKAGSKFNVISPEISTSGFKNLDAALQNYITVDVGSGQAQ
                     NQFVLADTDTVKTTYANGFPIIVETTNANGIQPEAPVLYRGMQVGIVSRLGLSELGDR
                     VLIYVNIQDKYKHLVRTNTQFWQASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYT
                     KVVKPQAQPNRRFFLQRKLPDEAPAWDQGIAE"
     gene            complement(31216..31656)
                     /gene="fur"
                     /locus_tag="PXD69_000284"
     CDS             complement(31216..31656)
                     /gene="fur"
                     /locus_tag="PXD69_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HDL6282526.1"
                     /translation="MSEANIKRLKEVGLKVTEPRLTILALMQDIRDEMQHFAAEDIYK
                     ILLEKGSDIGLATVYRVLNQFEEAGILTRHNFDANKAVFELNMNHEHDHIICMDCGKV
                     FEFKDPDMERRQREISEKHGMELTNHSLYLYGKCSNLTNCDEKK"
     gene            complement(31692..32216)
                     /gene="fldA"
                     /locus_tag="PXD69_000285"
     CDS             complement(31692..32216)
                     /gene="fldA"
                     /locus_tag="PXD69_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDL6282527.1"
                     /translation="MAVVGLFYGSDTGNTENISKMIQKKLGAELIDIRDIAKSTKEDI
                     EAYDFLMFGIPTWYYGESQADWDDFMPTLKEIDFNGKVVAIFGCGDQEDYAEYFCDAM
                     GTVRDVVEPNGGVIVGHWPTAGYTFEVSQALVDDDTFVGLCIDEDRQPELTTERVNKW
                     CEQLKEEMCLDQLA"
     gene            complement(32222..32497)
                     /gene="ybfE"
                     /locus_tag="PXD69_000286"
     CDS             complement(32222..32497)
                     /gene="ybfE"
                     /locus_tag="PXD69_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HDL6282528.1"
                     /translation="MAKQDSDCITLDLFATVPKVGRPRTNPLDREQQLRINKRNQLKR
                     DKSSGLKRVELKLHSNLVKLLEEQASEQGVSRGQLIETILNNYLTNR"
     gene            32738..33724
                     /locus_tag="PXD69_000287"
     CDS             32738..33724
                     /locus_tag="PXD69_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL6282529.1"
                     /translation="MSNIHLAIAADFTLAEKLLEALANQDLGIENISAVELEPFGEEQ
                     NLRFGAKAVAQYALDEVNWAEFSHVLFAGKMAQAEVLAEAVKAGCVILDLYGITALIG
                     DVPVVVPSVNDENVANLRERNIVALANPQISQLALALKPLLNELLKQVWVTSLLPSAY
                     FGDEKVKELAGQTARLLNGIPFDENAERIAFDVVPANVQGEEKSLPFSKAFELQIAKV
                     LPNLTACTTFHSVQVPVFYGVSQMVSVQSEYQLDANALSEAWKAENWLNFNENSVITA
                     VKNGENEEQNALEISQLLAKSEQEVQFWTVADEQRFSLAFLAVKLLKLVLAY"
     gene            33821..35116
                     /locus_tag="PXD69_000288"
     CDS             33821..35116
                     /locus_tag="PXD69_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL6282530.1"
                     /translation="MLEKLFQLKAKGSNVKTEIIAGITTFFTMVYIVFVNPSILGVAG
                     MDTQVVFVTTCLIAAFGTIAMGLFSNLPIALAPAMGLNAFFAFVVVQKLGYSWQVGMG
                     AIFLGSVGLFLLTVLQVRYWFMSAIPLGLRVGIGAGIGLFIALIGFKNMGLVVPNPAT
                     LVALGDLHDPKVLMGILGFFIIVVLAAKGIHSGVLISIVIVTALALAFDPAVSFNGIM
                     SMPPSLGAVVGQVDIAGAFDVALLGMIFSFMLVNLFDSSGTLIAVTTKAGFADEQGRF
                     PKMKQALLVDSTAAMAGSYMGTSAISTYIESGSGVSVGGRTGLTAVVVGILFLLTIFF
                     SPLAGLVPAYATAGALVFVGILMASSLIEVKWDDLTEATPAFITTAMMPFTYSITEGI
                     AFGFISYCVMKAFTGRWKEINLSVLVVSLLFIAKFVWVG"
     gene            35236..35604
                     /locus_tag="PXD69_000289"
     CDS             35236..35604
                     /locus_tag="PXD69_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/TusD sulfur relay family protein"
                     /protein_id="HDL6282531.1"
                     /translation="MSNSVQKLLFIINSAPYGNETFFSALRLALQIQEQHKANTEIKL
                     FLMSDAVTAGLAKQNPAEGYHIQQMLEILTAQGANVKLCKTCTNARGITDLPLADGVE
                     IGTLIELADWTIQADKVLNF"
     gene            35604..36797
                     /locus_tag="PXD69_000290"
     CDS             35604..36797
                     /locus_tag="PXD69_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL6282532.1"
                     /translation="MQNIDVVVIGAGAAGLFCAAQLGQAGKKVVVLDSGKKVGRKILM
                     SGGGFCNFTNLDVSAGNYLSQNRHFVKSALSRYTQWDFISLVSHYGISYHEKELGQLF
                     CDESSQQIVDLLQAECNKGKVEILLRQAVISVEKVANFFEISTACGKFQSEHLVIATG
                     GLSMPALGASPFGYQLAEQFGIPVVPPRASLVPFTWKESDKYFAELSGIALPITVSAN
                     GKSFSNQMLFTHRGLSGPAILQISNYWELGETVEIDLLPSQSITDILSELRQSSPKLQ
                     LKTVLSRYLPKKLVEVWLEQKLLTDKVIADLSKKDLTLLEQFIHHWHFLPNGTEGYRT
                     AEVTKGGVDTDYISSKTMEAKNTAGLYFIGEVLDVTGWLGGYNFQWAWSSAFACAEGI
                     IEKSK"
     gene            complement(36868..37086)
                     /gene="infA"
                     /locus_tag="PXD69_000291"
     CDS             complement(36868..37086)
                     /gene="infA"
                     /locus_tag="PXD69_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDL6282533.1"
                     /translation="MAKEDCIEMQGTILETLPNTMFRVELENGHIVTAHISGKMRKNY
                     IRILTGDKVTVEMTPYDLSKARIIFRAR"
     gene            complement(37196..37855)
                     /locus_tag="PXD69_000292"
     CDS             complement(37196..37855)
                     /locus_tag="PXD69_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HDL6282534.1"
                     /translation="MYISREKITKTLLLAGITLLCCGIVAVILMGVNQFKLGSQLASI
                     NQVSNLSHLLVRQQANIFSFLLVKNAKTDELVDALDSFAKEDFIIDANIYSPNGVLLA
                     QSQNAKDLKVLLDSEQSAKTQQIVEPIFSQQALVGFLRVTFDAEYGQTTKARVEQQFH
                     QLYGEIIILLLTGILLASSINYYFRRKIHHVQISPKPLMSQVKTQTQRFHSRRRWIKR
                     K"
     gene            37941..38804
                     /gene="serB"
                     /locus_tag="PXD69_000293"
     CDS             37941..38804
                     /gene="serB"
                     /locus_tag="PXD69_000293"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDL6282535.1"
                     /translation="MTNTIFIYSKTLNEREIEQFSQQTAAILLKQAVYLDYKIAFFST
                     NLTACELRETAQKINADISDLTIIPTLNQGGLLLMDMDSTAIKIECIDDIAKLAGTGE
                     VVSAITASAMRGELDFEQSLRKRVGTLENASESILQKVRENLPLMDGFEQMVAILKEH
                     GWKLAIASGGFDYFADYLKQKYGLNFAVSNQLEIIDGKLTGKVLGKVVDAQHKADTLQ
                     NLATTFNIPPNQWVAVGDGANDLPMLKTASLGVALHAKPKVQAQADFVVNFGDLTALC
                     LLLNANHLFQH"
     gene            38820..39311
                     /locus_tag="PXD69_000294"
     CDS             38820..39311
                     /locus_tag="PXD69_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDL6282536.1"
                     /translation="MPSFDIVSEITMHEVRNAVENANRVLSTRYDFRGVEAVIELNEK
                     NESIKLTTESDFQLEQLIEILIGSCVKRGIEHSSLDIPTESEHHGKLYSKEIKLKQGI
                     ESDMAKKITKLIKDSKIKVQAQIQGEQVRVTGKSRDDLQAAIQLVKGADLGQPFQFNN
                     FRD"
     gene            39396..39572
                     /locus_tag="PXD69_000295"
     CDS             39396..39572
                     /locus_tag="PXD69_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5363 domain-containing protein"
                     /protein_id="HDL6282537.1"
                     /translation="MMSEQTEKKGWFKKALEKYDAFCDELGVNQGACRGCVPVVKFDP
                     EPEKEQPEKSENKT"
     gene            complement(39620..39916)
                     /locus_tag="PXD69_000296"
     CDS             complement(39620..39916)
                     /locus_tag="PXD69_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282538.1"
                     /translation="MKKHHIIILTLASASVVACSSNTPVQVVNGDKNIDYSQPKTIYI
                     SETNTQPPALTKQEKIKPSNATALCFNGSYSTDIQNPCKKDGGVKQYFAHHHAN"
     gene            complement(39993..40961)
                     /gene="mdh"
                     /locus_tag="PXD69_000297"
     CDS             complement(39993..40961)
                     /gene="mdh"
                     /locus_tag="PXD69_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDL6282539.1"
                     /translation="MCQSKKVALLGAAGGIGQSLALLLKLNLPAKSELSLYDISPVTP
                     GIAVDLSHIPTDVKVTGFAGEDPTEALKDADVVVISAGVARKPGMTRADLFNTNATIV
                     HNLVEKAAKVCPKACIAIITNPVNTIIPIAAEVLKKAGVYDKNKLFGVTTLDVIRANT
                     FVAEAKDVNVKYVRVPVIGGHSGTTILPLLSQATVNGLKLEFTQEQIEQLTHRIQNAG
                     TEVVEAKAGGGSATLSMAQAGAEFALGLVRALIGEDVIRYAYVDNANGETSPAFFAYP
                     IRLGTNGVEKVLPIGNLSEFEKDQLEQLIPVLNDEIQLGQTFNKNA"
     gene            41157..41618
                     /gene="argR"
                     /locus_tag="PXD69_000298"
     CDS             41157..41618
                     /gene="argR"
                     /locus_tag="PXD69_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDL6282540.1"
                     /translation="MDKIDSLSEAFKSLLKEEKFGSQSEIVAALQEMGFDNINQSKVS
                     RMLSKFGAVRTRNPKMEMVYQLPVELSVPTTSSPLKNLVVDIDHNDALIVVKTSPGAA
                     QLIARLLDSMGKAEGILGTIAGDDTIFITPVRNVQIEKLVKNVTQLFETSL"
     gene            41668..42564
                     /locus_tag="PXD69_000299"
     CDS             41668..42564
                     /locus_tag="PXD69_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDL6282541.1"
                     /translation="MHIFITGGTGFIGRELIQQLKSENHHFTLLTRDTEAKSDDLQIN
                     YCYSLDELVDLNDFDAVINLAGEPIFDKRWTDEQKQKLIESRVNLTNKLSQLMNASSN
                     PPHTFLSGSAIGIYGDLPPSANFYTESTACYQDCFTNRLCQQWEAAALKAASDKTRVC
                     LIRTGTVFSPEGGALKKILPLYRCGLGGKLGSGKQYWAWISRRDHVQAVIFLLKNANC
                     SGAYNFVAPNPVRNEEFNRILANAVNRPAFFTVPEFALKLGLGERACLVLDNQQLIPE
                     KLLAASFVFQDPILTENVFLNP"
     gene            42609..44807
                     /gene="uvrD"
                     /locus_tag="PXD69_000300"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             42609..44807
                     /gene="uvrD"
                     /locus_tag="PXD69_000300"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HDL6282542.1"
                     /translation="MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIA
                     WLIGVENVPESNILAVTFTNKAAAEMRHRIEYTLSQSGDNRLFGMWVGTFHSIANRLL
                     RSHYLDADLPQDFQIMDTEDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRA
                     KDIDHYNDPNEKKLVEIYQIYQDACDRAGLLDFAELLIRAYELFKTKSTILQRYQQRF
                     QQILIDEFQDTNNIQYDLIRLLAGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYD
                     NAQTIRLEQNYRSTGNILSCANELIANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEA
                     RFVASQIKQWKEDEGDLAECAVLYRSNSQSRVIEEALIQANIPYRIYGGMRFFERQEI
                     KDALAYLRLIANRQDDAAFERVINTPTRGIGDRTLDTLRQITRGRQITLWQAIQVAVQ
                     EEQLSGRATSSLLRFVELINALDQETEQMSLAEQTDFVIKKSGLYEMYKQEKGEKGEV
                     RIENLEELVTATKQFVKPDEAEELTDLTAFLTHASLEAGEAQASQHEDYVELMTLHSA
                     KGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERRLAYVGITRAKKKLTISYAESRRLY
                     GKEERHVPSRFIAELPEEHIREVRLRGSINRAASFNQANSFAKNPTKTTASFLNDDTW
                     KMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNGIKWLIAKMANLERI"
BASE COUNT        13309 a         8551 c         9763 g        13329 t
ORIGIN      
        1 agtaatctat tagattgaaa aattatgaac aaaaaacttc caccactcaa tgcattgaaa
       61 gcatttgaat ctgctgcacg ccatttaaat tttactaaag cggcagaaga tctcttcgtc
      121 acacaagctg cagtgagcca ccaaattaaa ctattagaag attttttagg tgcttccctg
      181 ttccatcgcc gtaaccgttt gctggaatta actgagttag gcgcacaata tttctatgaa
      241 gttcagccat tattagaaca aattgctctc gcaacagata aaattaggca gcaaagtagt
      301 cgtcaaattc tgactattag cgtaccacaa acatttggta tgcattggtt agtcccacgt
      361 ttggcggatt tccacgaaaa atatccagaa gtggaagtac gtattaaggg tgttgatcaa
      421 gatgagggat tattaggtaa agaaacagat gttgctattt attatggtaa gggggattgg
      481 caaggtctgg aatctatccg tttgacggaa tcccgtattg ttattttagc ttcgcctgag
      541 tatttatcgc aaaataccat tcatttaccg gcggatttag caggtaagca tttattacat
      601 tcctccaccc ataataagtg gaaaagaatg gttgaacatt tgcatataga agatatagta
      661 gatgcggaaa ctggctcaat ttttagccat acttttatgg tgcttcaagc tgcaatgcac
      721 caacaaggca ttgcgattgc caaccagttg ttggcacagc acgaaattga aaaaggtact
      781 ttaatagagc ctttcccaac cacattgttt gatgaaaaat cgttctatgt tgtctatcct
      841 tcgcaatcag cccaagttca gaaagtacaa ttttttgttg agtggattca gcaaaaaatg
      901 aaagagtgtt gtgcttaagc gtggctttat cagcggtatg cgaaaaatta gaaaaatttg
      961 accgcttgtt atctaagtta aaaaaggaat attatgaaat atcaatgggt attatttgat
     1021 gctgatgaaa ccttgttttc atttaattct tatcttggtt taaaagcgat gctggctcgt
     1081 taccaaattg attttagtga acaagattat caagactttc aagcggtaaa taaaccactt
     1141 tgggtggctt accaaaataa tgagatcact gctcaagata ttcaaaccag acgttttgta
     1201 aaattatctg ctcaaacagg cgtagatccg ctacaactta atcaagagtt aatggcggag
     1261 atggcattcg tcagtcagcc tttagaaggt gtaatggata tgttaaatgc tttatatggt
     1321 aaagtaaaaa tgggcattat caccaatggt tttaccgatt tgcagcaaaa acgtttagat
     1381 aatactcaaa cttcacattt ttttgatatt gtagtgatat cagaacaaat tggtgccgca
     1441 aagcctgatc gccaagtgtt tgattacgct tttgcattaa tggacgaatt tgatcgtact
     1501 aaagtgctta tggtaggcga taccctcgct tctgatattt taggaggtaa taatgctgga
     1561 attgatactt gttggttaaa tttgcttagt aaagagaatg atacggatat taagccaact
     1621 tacgaagtgc atacgatgca acagattatt gcgattgtag aggggaaatc attatgaagc
     1681 tacaacagtt acgttatatc gttgaaatag taaaccagaa cttgaatatt accgaggccg
     1741 cagaggtgct ttacacttct caaccgggga ttagcaaaca agttcgtttg ttggaaagtg
     1801 agttgggaat taatattttt gagcgtaacg gtaagcacgt taaggggcta acgcctgctg
     1861 gtgaaaaaat tgtggcgatt gctcgtgaat tattggtaaa agcccagagc attaaatcgg
     1921 ttgctgaaga acaaactcga cccaacaaag gcatcttacg cattgcgacc accaataccc
     1981 aagcccgtta tatgctaccg agtgtaattg agaagtttaa ggctcgctat cctgaagtaa
     2041 gtttgcattt gcaccaaggc tccccgaatc aaatttatga tgctttggtg gctggagaag
     2101 tggatttagc cattaccaca gaagctcaat atttatttga tgaagcggtt ttattgccgt
     2161 gttattggtg gaatcgttca gttattgtca aaccagagca tcctcttgcg gcttttgtga
     2221 accaaagtaa aaatttgact gtcgaacaat taggtagata tgatttgata acctatactt
     2281 ttggttttac agggcaatcg gatttagatc atgccttcaa taaggaaggt attttgccta
     2341 atatcgtatt tacggcgaca gatgctgatg taatcaaaac ttatgtacgc ttaggcttag
     2401 gggttggtat tatggcatca atggcacata cggaaacgga taaagactta gtcgctatca
     2461 atgcaagtca cctgtttcaa ccgagtatga cgcaaatcgc ctttaaacga ggaacttttc
     2521 ttcgtaacta tatgtatgat tttattaatt atttttcgcc acatttaaca cgggtacaag
     2581 tggagaaagc ggaacaatta cgagataaca atgcaatttc aaggttgttc gaaagtatat
     2641 ctttagagga gaaatagatg agaatttggc agaagttagc gagcgtaatc gtggtcactt
     2701 tgggcttgat ttcaaacgcc agtgcggaga attttaagtt gaaatacagc tcaaattatt
     2761 taatgccagc ctacattaac tttaataacg gtggtggcca atataatatt caggcaaaaa
     2821 ttaatgtgcc tttatataat attgtctttt ctgcgaaggg aacagaaaaa aacgaacaat
     2881 ttcatatgtt gagctaccga gatacccgta acggcaaaac ttatgcgatg gcagaaattg
     2941 attctaaaac ggtaaaatat ggcaaagtga aagagccact aaaagaagaa gcgctgacta
     3001 tgccaactta tgatttgttc accacagcct ttcagttgag ctattacgat aaattaccga
     3061 gcagttttca aactactaac ggtaaaaaac tttacccaac accgaatgtg cagctacgca
     3121 aagcccaaaa agaggtaaaa gtaggcggca aaacctacca agaaattacc tacaagttta
     3181 gaaccagtga taaaaaagac attacggtga aaaaatttga aggtgaaaaa ttccctcgct
     3241 atatcgccta tagtcgtgat ggcgacaatt atgagctaac ttttgatagc tttgtaaaat
     3301 aataaagatt agtaatgaga caagcggtct attttgtgat ttgttttgca aaatagaccg
     3361 cttgttattt actttttaga aatcttcaaa atattgttga atagttttta tatcatttgt
     3421 ttgtgttaag gcgagctgca gtaatactcg agctttttga ggatttaatg tgccggaagc
     3481 aataaaacca tacttgctat catcaatttc tgcatctcgg gtagtatatc cggttggcac
     3541 tcgagacgag cgaaccacgg taattccttt tttagctgct tcttcaagta aagccaaatt
     3601 agccgcattc atattgccat tgccaactcc tgcaaccacg atgccttgat aactcgcatc
     3661 taataatgct tgaagcggtt cggttggcat atttgaataa gcataaataa tgccgacttt
     3721 tggcaattcc gttaattcat ctactttgaa aggggtgttt acggtgtgtt tactttcagg
     3781 agagcgctca taatcaactt tgctattatg gatatagcct agtgcgccaa agtttggtga
     3841 gttaaatgtt tgcactgatg tagtactggt ttttgtaaca tcgcgagcgc ccaatacaat
     3901 atcattcatt gcaaccaaca cccctctgcc actagattta gaatctttgg cgacaacaac
     3961 tgagttatat aaatttaata cgccgtcggc acttttttca gttgctggtc gcatggcccc
     4021 cactaatact acgggttttt cgcattttac agtcatatca aggaagtata cggtttcctc
     4081 catagtgtct gtgccgtgcg taataacgaa gccatctgtg tttgggcatt gttgattaat
     4141 tgcttttgcc agttttagcc atacttcatc agacatatcc tgagatccga ttttaacgat
     4201 ttgttctcct ttgatatttg ctaatttttt aatatccggg acggcttcta tgagtgtttc
     4261 aatatttagc tgcccagctt gataagctga ggttgccgta tttttttggc taccggcaat
     4321 tgtccctcca gttgcaagaa ttgtaatatt aggtaggtcg gctgcttgaa ttggcatagt
     4381 agcaatgctt aacagagttg gcagtagtaa ttttttgatt ttcattgtat cgtctccagt
     4441 attagaaaaa caggtattat gatatctata aacatgtagg ttaattctga tctatcgcaa
     4501 ataatagtgt attaattaag attagtcggc attattgaaa aaagaattaa tctgactgct
     4561 tgccgatttt ccattagcaa aaaaatgtaa tttgatgtaa actactttcc cgtcctgata
     4621 gtttcttttt tacgaagtaa actgatattc tgaatttcca acctaatcaa tcagcaaagg
     4681 caatcacaat gacaacgaat tatattttcg tcacaggcgg tgttgtatct tctttaggga
     4741 agggtattgc ggcagcctct ttagcatcta ttctggaagc tcgtggttta aatgtaacca
     4801 ttatgaagct tgatccttat atcaatgtcg atccgggtac aatgagtcca actcagcacg
     4861 gggaggtatt tgtgaccgaa gacggtgcgg aaaccgattt ggatttaggt cactacgagc
     4921 gttttatccg ttcaaaaatg agcaaagcca acaactttac cagcggtaaa atttactctg
     4981 aagtgttgcg taaagaacgc cgtggcgact atttaggtgc aaccattcag gttattccgc
     5041 atattaccaa cgagattaaa gcccgtgtgt tagaaggcgg taaagggcgt gatgtcgcca
     5101 ttgtagaagt aggtggcacg gtgggggata ttgaatcact gccattctta gaagcactcc
     5161 gccaattagc ggtggatatc ggtcgtgaaa aaaccttgtt tatgcattta accttagtgc
     5221 cttatattcc aaccgcaggg gaagtgaaaa ctaagccgac tcagcattca gtaaaagagt
     5281 tgctttcaat cggtattcag ccggatgtgt taatttgccg ttcagatcgt gctattccgg
     5341 aaaatgagaa gaaaaaaatc gcccttttct gtaatgtgcc ggagcgtgcg gttatttcgc
     5401 ttaaagatgt agattcgatt tatcgcattc cggaattatt gaaatcgcaa gggttagatt
     5461 cctttgtgtg cgatcgtttc cgtttagatt gcaaagaagc cgatctttca gagtgggaac
     5521 aagtgctata ctgccaagca aacccaaccg gcgaagtgac tatcggtatg gtcggaaaat
     5581 atgtggaatt acctgatgcg tataaatcgg tgaatgaggc tttgaaacac gcaggtttaa
     5641 cgcatcgttt aacagtgaat attaaataca ttgattcaca agatattgaa accaaaggca
     5701 cagagttatt ggcaggctta gacggcattc ttgtgccggg cggctttggc tatcgtggcg
     5761 tggaaggcaa aattcgaacc gcacaatatg cccgtgaaaa caagattcct tacttaggta
     5821 tctgtttagg tatgcagatc gccctaattg aatatgcccg taatgtggca ggtttaaccg
     5881 aggcaaattc ttctgaattt gataaagatt gctcacagcc ggtgattggc ttaattaccg
     5941 aatggcaaga tgcggaaggg aatgtggaaa cccgcagcga tgagtcagat ttaggtggta
     6001 caatgcgttt aggctcacaa caatgccatt taattgaagg ctcaaaagct cgtgagttat
     6061 atggtgcgga aacgattgtt gaacgtcatc gccaccgtta cgaagtaaac aataagctgt
     6121 taccacaaat tgaagcggca ggcttaaaag tgagcggttt atcggcagat cgtaaattag
     6181 tggaaattat tgaagtgcca aatcaccctt ggtttatagc agcacaattc catccggaat
     6241 ttacctcaac tccgcgtgat ggtcatccat tatttgcagg ttttgtgaaa gctgcgaaag
     6301 atcaccaaga gagtcgtaag gcttaatcaa acttaacaag cggtcgaatt tactcatttt
     6361 tttgtacaaa cgcttgcgtt tgaacatcgg ctttgctgat ggcacgaagt gcgagcgaaa
     6421 gcgagtaaat ttgaccgctt gctcattaat tataagaaag ggataaatca atgatttatc
     6481 ccttttagta tttttaatag taagaatgtt caccgtgttg gtgttcggta atatctttca
     6541 caccaactaa ttcatcaggg aacattgcca gaagctgttt ctcaattccc tcttttaagg
     6601 tcacatccac cattgagcaa ccgttacaac caccgccgaa ttgtagcacg gcatatttat
     6661 cttcggtgat ttcaattaag gtcactttac cgccgtggct ggcaagttgt ggattgactt
     6721 gggtttgaat cacataatct aaacgctcga taaacggtgc atcatcagcc actttacgca
     6781 ttttggcgtt aggggctttg agggtaagtt gtgaacccat tgggtcggtt acataatcaa
     6841 tttccgcttc gtctaaaaac ggtaagctaa tatcatcgac aaatgcagag aaacggttaa
     6901 atttaaattc ggtatccgtc tcttcaactg cattgggtgg gcagtaagag acaccgcatt
     6961 ctgcccccgg tgtgccggga ttgaccacaa aaatacggat attagttccc tcttcttgct
     7021 gttctaatag tctggcaaaa tgggcttgtg ctgcatctga tattgaaata tgaatggttt
     7081 gttcttccat ttaaattatc ctgtttttta atattttaca aaatttatca actattttac
     7141 gcctgaattt caaaattgcc tagctaaaaa aatttttgca aattgttaat aaaatttaac
     7201 cgcttgaagg gaaattggat taactaatta tggttaattt atgttaagag ggaattgaaa
     7261 tcttgattta tttcaaattt taccgcggga atatgcaaaa aatagggggt tttcctagcc
     7321 agaaggggag ctttttaggt aaaataagaa gattattttt agttaacctt ttgttaagaa
     7381 aagataaagg ttgatcacag atttgagaac ttaatgtggc ttttaaaaat aggtggggga
     7441 ccattgttta tttttaagta aagctgcggc tcaatagaag cgattgcgtt agcgcaatca
     7501 tattttttaa cccaaaagaa aagtagtgca aacaatatga ttacaatcaa aaaaggctta
     7561 gatcttccga ttgcgggaaa acctgagcaa gtaatccata acggtaatac cgttactgaa
     7621 gttgctatgc ttggtgaaga atatgtgggt atgcgtcctt caatgaaagt gcgtgaaggc
     7681 gatgtagtaa agaaaggtca ggttcttttt gaagataaaa agaatccggg cgtggtattt
     7741 actgcccctg caagtggtac cgtaacggca attaaccgtg gcgagaagcg tgttcttcaa
     7801 tcggtagtaa ttaaagttga gggtgatgag caaattacct ttgctcgtta tgaagccagc
     7861 caattagctt cattaacttc agagcaagta aaacaaaacc ttgtagagtc aggcttatgg
     7921 acggctttcc gtacacgtcc gtttagcaaa gtgcctgcat tagatgcaga accttcctct
     7981 atttttgtca atgcgatgga taccaatcca cttgcagcaa atccggaagt gattattgca
     8041 gaacaccaac aagctttctt tgatggctta actgtattaa gtcgtttatt tgaaagtaaa
     8101 aaagtgattc atctctgtgg cagtgcagac tcaaatattt taaatgcggc acaaagccgt
     8161 cagatcaata atgtggaaac taaccgcttt aaaggtccgc accctgcagg tctttctggt
     8221 acgcatattc actttattga cccggtaggt gcaactaaac aagtttggta tttaaattac
     8281 caagatgtaa ttgctatcgg taaattattt acgaccggtg agctatttac tgaccgtgta
     8341 gtcgcattag ccgggccaca agtgaaaaat ccacgtttgg tgcgtactcg tttaggggcg
     8401 aatctttcac aattaacagc caacgaatta aatgcgggtg aaaaccgtgt catttcaggt
     8461 tctgtgttaa gtggtgctat cgcaacggga gtacacgact atttaggtcg ttacgcatta
     8521 caagtgtctg ctttattaga agggcgtgag aaagcgttct tcggtatgat tgctccttac
     8581 tctgataagt attcaattac gcgtactact ttagggcatt ttgcgaagaa attatttaac
     8641 ttcacaacag cagttcacgg tagtgagcgt gcaatggtac caacaggggc ttatgagcgt
     8701 gtaatgccgt tggatatcat tccaacactc ttattgcgtg atttagcagc tggagataca
     8761 gactccgctc aagctttagg ctgcttagag ttagacgaag aagatttagc gttatgtact
     8821 tttgtgtgtt ccggtaaaaa caactgggga ccattattac gtcaagcgtt agataagatc
     8881 gagaaggacg gttaaaaatg ggtttgaaaa atctttttga aaaaatggaa cccgctttcc
     8941 ataaaggtgg aaagtatgag aaatggtaca cgctatttga agctgcctat acgattttct
     9001 atacaccggg tacggtcact cgtaaagatg ctcacgtgcg tgatgcgatt gactctaagc
     9061 gtatgatgtt aattgtatgg ttagcgttat tccctgcgat gttctacgga atgtacaatg
     9121 ttggtgcaca gggtattcta gcggcactca aaatgggaac attaacggat ttagttgcta
     9181 acaactggca ctacagctta gccgatagtt taggctctgt agctgatgca ggctggggaa
     9241 ctaaaatgtt gctgggggca acctatttcc taccaatcta cttaacagta tttgcagtgg
     9301 gcggtttctg ggaagtggtg tttgcaatgg tgcgtaagca cgagatcaac gaaggtttct
     9361 ttgtaacctc tatcttacta gcattaattg ttcctccaac attaccgtta tggcaagcag
     9421 cccttgcaac tacctttggt gttgtggtcg caaaagaagt gttcggtggc gtgggtaaaa
     9481 actttatgaa ccctgcgtta gccggtcgtg ctttcttgtt ctttgcttac ccgggtcaaa
     9541 tttcaggtga tgcagtatgg gttgccgcag acggcttctc aggtgcaact gcactttctc
     9601 aatgggcagt tggtggtcaa ggtgcattac agcacgttgc aaccggtgaa accattactt
     9661 ggatggatgc gttcttaggt aatattccgg gttctatcgg cgagacctct accttaatgt
     9721 tgattattgg tgctgcaatc attgtatttg cccgaattgc ttcttggcga attattgccg
     9781 gtgtaatgat tggtatggcg gcaactgcga cattatttaa tgtaatcggt tctgatacca
     9841 acccattatt ctctatgcct tggcattggc atttagtatt aggcggtttt gcgatcggta
     9901 tgttctttat ggcaaccgac ccggtatcag ctgcatttac caacaaaggt aaatgggcat
     9961 acggtatctt aatcggcttt atgtgtgtat taatccgtgt ggtaaaccca gcataccctg
    10021 aaggtatgat gttagcgatc ttatttgcta acttatttgc tccaatcttt gactatttag
    10081 tagttcaagg gaatatcaaa cgcagattag cgagggtagc aaacaatggc taaatttaat
    10141 aaagatagcg ttggcggaac gctaaccgtt gtagttttat taagtttaat ttgttctttg
    10201 attgtggcag gtgcggcagt aatgcttaaa ccaacacaag atattcagaa acaacttgat
    10261 aaacagaaaa acatcttaca agcggccggt ttattgcaaa aagataccaa tgtgcaagaa
    10321 acctatacca aatttattga gccgaaaatt gtcgatttag caacaggtga ttacgttgag
    10381 ggtgtaaccg gttttgatgc tcgtgcagca gctaaagatc ctgctcaaaa tgtagttatc
    10441 gcacctgaag atgataaggc gaatatcaaa acgcgtgcta aatatgctga agtttattta
    10501 gtaaaagatg aatctggcaa aacgactcaa gtagtattac caatgcacgg taacggctta
    10561 tggtcaatta tgtacggttt cgttgcggta caacctgatg caaataccgt taacggtatt
    10621 acttactatg aacaaggtga aacggcaggc ttaggtggcg aaattgcaaa cccgaactgg
    10681 cagaaaaact ttgtaggtaa aaaactgtat aacgagcaaa accaagttgc gttaagagtg
    10741 ggtaaagggg catctgcaga taaagatcac ggtgttgatg gtttatctgg tgcaacatta
    10801 acctcgaacg gtgttgatgg ttcattcaaa tactggtttg gtcaaaatgg ttttggtcca
    10861 tatttagcaa aatttaaagc agcggcagga gctaactaat ggcagacaat aacaatctta
    10921 aaaaattatt gttatcgcca attgtcgata acaacccgat cgcattacag atcttaggta
    10981 tttgttctgc gttagcggta acgactcaat tacaaacagc agtagtaatg gcgattgcgg
    11041 taagtttagt tactgcattc tcaagtatgt tcatttcaat gattcgtaac tatattccaa
    11101 atagtatccg tatcattgtg caaatggcga ttattgcatc attagtaatt ttggttgacc
    11161 aaatcttacg cgcttatgct tacgatctgt caaaacaatt atcggtattc gtaggcctta
    11221 ttattaccaa ctgtatcgta atggggcgtg cagaagcatt cgcgatgaaa tcaggcccgg
    11281 ttgaaagttt tgttgatggt atcggtaacg gtttaggcta cggtgcaatg ttaattatcg
    11341 ttgccttttt acgtgaactt atcggttcag gtaaaatttt cggtatcacc attcttgaaa
    11401 ctgttcaaaa tggcggttgg tatcaagcaa acggtttatt cttattagca ccaagtgcgt
    11461 tctttattat cggatttgtg atctgggcga ttagaacgtg gaaaccggaa caagtggaga
    11521 aataagatgg aacatcttct gagtatcttt gttaagtcca tatttattga aaatatggca
    11581 ctttctttct tccttggtat gtgtacattc cttgcggtgt ctaagaaagt ttcaactgct
    11641 tttggtttag gtattgcggt aattgtagta cttggcattg cagttccagc taaccaatta
    11701 gtttataccc acgtattaaa agagggtgca ttagtagaag gtgtggattt aagcttctta
    11761 aactttatca ctttcatcgg ggttattgcg gcacttgttc aaattctgga aatgatttta
    11821 gacaagtttt tcccggcact ttatagtgca ttaggtatct tcttaccact tatcaccgta
    11881 aactgtgcga tttttggtgg tgtatcgttt atggtacaac gtgagtataa ctttgtagaa
    11941 tctgtggttt atggcgtagg tgcaggtaca ggctggatgt tagccatcgt tgcccttgca
    12001 ggtttaaccg agaaaatgaa atattccgac gtgccggcag gcttacgtgg tttaggtatt
    12061 acctttatta cggtaggctt aatggcgtta ggctttatgt cattctcagg cattcaatta
    12121 taaggagcat atcgtggata gtaattttat tttcggtatt atcgcattta cggctctggt
    12181 attagtgctt gcggtgatca ttcttttcgc taaatcaaaa ttagttgatt caggtgatat
    12241 taccatctca atcaacaacg atccggaaaa aggcattacg ctaccggctg gtggaaaatt
    12301 actcggtgct ttagcaagta aagggatttt cgtttcgtca gcttgtgggg gcggtggctc
    12361 ttgcggtcaa tgtaaagtac aagtgaaatc aggcggtggt gaaattcttc caactgagtt
    12421 atcgcacatt tctaagaaag aagcgaaaga aggctggcgt ttagcttgtc aggtaaacgt
    12481 gaaatcttca atggacgttg aacttccgga agagatcttt ggtgtgaaaa aatgggaatg
    12541 taccgttatc tcaaacgata acaaagcaac cttcatcaaa gagcttaaac ttcaaattcc
    12601 tgaaggcgaa gaagtaccgt tccgtgcggg tggttatatc caaattgaag ctgaacctca
    12661 taccgttcat tataaagact tcgatattcc aaaagagtac cacgaagact gggataaatt
    12721 tgacttatgg cgttatactt caaaagtgga cgagcatatt attcgtgcat actcaatggc
    12781 ttcatatccg gaagagaaag gcattattat gcttaacgtg cgtattgcta cacctccacc
    12841 acgcaatccg gacgtaccgc cgggtcaaat gtcttcctac atttggtcat taaaaccggg
    12901 tgataaagta acaatttcag gtccattcgg tgagttcttc gctaaagata ccgatgcgga
    12961 aatggtcttt atcggtggtg gtgcaggtat ggcaccaatg cgttcacata tcttcgacca
    13021 attaaaacgt ttaaaatcta aacgtaaaat gtcattctgg tatggtgctc gttctgagcg
    13081 tgaaatgttc tatgtggaag attttgatgg tcttcaagca gaaaacgata acttcaaatg
    13141 gtatgtggca ctttctgatc cattaccggg cgacagagaa gattacttcc gtggctttat
    13201 tcataacgtg ctttatgaga actacctcaa aaaccacgaa gcacctgaag actgcgaata
    13261 ctatatgtgt ggtccaccgg tgatgaatgc tgcggtaatc ggtatgctga agagtttagg
    13321 tgtagaagac gaaaacatct tattagatga ctttggtggt tgataaacct taacttctga
    13381 ctacaagcgg tcaaatttgc aaaattgacc gcttgattta atttatatta ttaagttttg
    13441 gtaatttaat aatgtgaatt ttaaggggaa gcaaatggaa caactggata ttacggtact
    13501 tgaaaatgcc ttcaattccc ttgagaaaac gattgtcagc cttgagaatc aagcgtggtt
    13561 taaccggcaa gaagcaatta ttcaagacac tttgattgca ggagcaatcc aaaaatttga
    13621 atttgtttac gaattgtcga taaaaatgct caagcgtcag ctcaaaaaca ttgagtcaaa
    13681 tgacactgat attgatagca ccgagttccg tgatattttg cgaatggctg ctcaatatgg
    13741 gctgattgaa tcaccggaag tttggctgga ttatcgcaaa atgcgaaata ttacttcgca
    13801 tacttatgat caaaataaag cacagcaggt ttataacgga atttcaaact ttctggaaag
    13861 tacgtatttt ttagttaaac agctccaaaa acgcaatagc tatgattgat ttaactgagt
    13921 cacaacgcca acaggtgttg gatattttca aaaaatactt gcctgataca cccgtttggg
    13981 tttttggctc tcgcattaaa ggcacagcca aagcctattc ggatcttgat ttagcattaa
    14041 tcaccaaaca accgctcaca attcggcaac aaacagagtt agagcttgcg tttacggatt
    14101 ctgacctacc tttcacagta gatctgattg actgggcaag ttgcaacgaa tcgtttaaac
    14161 aaattatttt acagcgatat gaagtgctta tttaatcgct aaatatgcta taatttcccc
    14221 aatttttaac ttttgtgaca ccaatgaaaa aattttttct tcttttaatt gcttttttta
    14281 ctttaagtgc ttgtgaaaaa gcccctgagc aaattacgct gtcaggcaaa accatgggaa
    14341 cgacttacac cgtaaaatat attgataatg gtgaagtgga gaatttgatt tcgcctgaaa
    14401 aaatgaaaaa tgagctggat ggcttattga ttgaggtgaa taatcagatg tccacctacc
    14461 aacaagattc ggaaattagc cgttttaatc aagcaaagca ggcaaatcaa gcggtcgaaa
    14521 tttcgcagga ttttgcaaaa gtggtacaag aggcaatccg tttaaataaa gtaaccgaag
    14581 gggctttaga tgtaaccgtt ggtccattgg tgaacttgtg gggcttcggg ccggataaac
    14641 gcttaaataa agtgccgtct gatgaacaaa ttgcagagcg ttctgcttat gtcggcattg
    14701 ataaaatttt gcttgaaatg agtagtaaac ccaagctcac caagtcagca gctaatcttt
    14761 atctagattt atcgtctatt gcaaagggtt tcggtgtaga taaattagcc gagcatcttg
    14821 aaactatagg tgtgagcaac tatttagttg aaattggtgg cgaattacga ggcaaaggaa
    14881 aaaatttaca aggcttagat tggcggattg caatcgagaa gccggtaatg acacaaggtc
    14941 aagccgcaca aattaccgtg ccgttgcaca atttggcgat ggcaacttcg ggcaattatc
    15001 gtaattattt tgaagatgaa aaaggcaacc gtctttcaca tattatcgac ccaaaacagt
    15061 tacgtccggt aaaccataat ttagcctcta tcaccgtatt tgccccaact acaatgacgg
    15121 cagacggctt atcaaccggt ttatttgttt taggagcgga aaaagcatta gcagtggcag
    15181 agcgtgaaaa attagctatt tttttaattg ttaaaaacgg cgataaattt gagacacaaa
    15241 tgtcgagcga atttagcaaa cttattcaat cacaatagtt ggagtgaaaa atggaaactg
    15301 tattattaac ctttggcttt tttgtagccg taatttttgc gatgtcgatt ggttttatcg
    15361 tgaaaggcaa aaccatcaaa ggcagctgtg gcggtatcac cgctttaggt atgaaaaaaa
    15421 tgtgcgactg cgaagaacct tgcgataacc taaaatctaa aatcgcagac ggcacagccg
    15481 accctgaaga agtggcacgt tttaataaag agccacaatt ttatgaagtg aaataatatg
    15541 aatagagata ttcgctggaa acagcggttt gataactata aaaaatcagt aagttacctt
    15601 caagcagaag cagaaaaata cgctgatacc gacattgatg taattaaaaa aggaattatc
    15661 cagagttttg agattacaca cgagttagcg tggaagttaa tgcaagatat tttaaaatgg
    15721 gaaggtgaag ttgatattta tggttcaaaa acggcttctc gtttggcttt taatcgtggg
    15781 ctaatcactc agggcgaagt ttggctagaa atgataaaaa gccgcaatat aacagttcat
    15841 actgacgatg aaactatttt aactgaagaa tttaataaaa ttatcaaggc gtatctgcct
    15901 ttatttattg aatttgaaca gcgagtagaa acactatgcc aaactttgga ctaagcgaac
    15961 gagcgacgaa aactattacc gatattcttg cgaaataccc tgaagtggag caagccatta
    16021 tttacggctc gcgtgctaaa ggtaattatc gtgaaggctc agatgtagat cttactttta
    16081 aaggaaaaga tcttacttac gatattgtca aacgcatttg gggtgattta gacgattccg
    16141 actcgcccta tttatttgac ttgtcgattt atcatcaatt aaccaatgcc aactttattg
    16201 aacatattga tagagtagga aaagtctttt accaaagaga actctaattt cttaataggc
    16261 aagcggttca ttttgcaaaa ttttttgcaa atttcaccgc ttgttgtttt tattattaac
    16321 caatgtgctt cgccttaacc gaagttacgg gagatttatg acaactcaat taacctcaaa
    16381 aacctacgac actcatttcc ctaaattaac cccagaacaa cttgctgaaa acagcaagaa
    16441 aaaagtcatt atcggtatgt ccggtggggt ggattcctcg gtttccgctt ttattcttca
    16501 acagcagggc taccaagtgg aaggcttgtt tatgaaaaac tgggaagaag atgatgatac
    16561 ggattattgt accgccgccg ccgagcttgc cgatgctcaa gcggttgccg ataaactggg
    16621 tatgaaactg cataaaatta attttgcagc ggaatattgg gataatgtat ttgaatattt
    16681 cttggcagaa tacaaggcag gaagaacgcc aaatccggat attttgtgta ataaagagat
    16741 caaatttaaa gcctttttgg aatatgcggc agaagatctt ggtgcggatt atattgcgac
    16801 cgggcattac gtccgccgta cgagcgatga tcaagatgcg aaacttttgc gtggcttaga
    16861 tgaaaacaaa gatcagagtt actttttata tgcgttaaat aaaaagcaga tcgggcagag
    16921 tttattccca gtgggtgaaa ttgagaagcc gattgtgcga gccattgccg aagacctagg
    16981 attagcaacc gcaaagaaaa aagattctac cggcatttgt tttatcggtg agcgtaaatt
    17041 taaagatttc ttagctcgtt ttctaccggc tcaaccgggg gaaatccgca ccgttgaggg
    17101 caaattagtc ggtcgccatg atgggctgat gtatcacacg cttgggcaac gcaaaggctt
    17161 gggtatcggt ggggtgaaag ggctaagtga agatccgttt tatgtggtgg agaaagactt
    17221 aattaacaat gtattgattg tggcacaagg acacgataat tcagccctgc tttcaagtgg
    17281 cttaattgcg aaacagctca cttgggtgga tatgcagccg ttgcgtgaaa atttacgctg
    17341 cacggtaaaa acccgttatc gtcaagcaga tattgcgtgt gaaatccaag tgattgatga
    17401 tgaaaccatt cgagtgatgt ttgatgaacc gcaaattgcc gtgacgccgg ggcagtctgc
    17461 cgtgttttac ttaggtgaag tttgcttagg cggtggcatt attgagtcac aattaaaata
    17521 gttataaata aatattgaaa tattttgcat atttatgcaa aataagcgaa aagttaaggc
    17581 ggtaaaacgc ctttttcatt ttgatcgata caaagaataa tatacaagga acagactgtg
    17641 gcactttggg gtggacgctt tacacaacaa gcagacgcaa aatttaaata ttttaacgat
    17701 tcattacgtt ttgattaccg cttggcgatt caagatattg aaggctcaat cggctgggca
    17761 aaagccatta cttcggtagg tattttaacg gtagcagaat tagaacaact aatcgcagca
    17821 ttaaaagagg tgagagcaga ggtagaatct aaccttacca tcatcttaaa agatgatgcg
    17881 gaagacattc acagctgggt tgaatctaag ctgattgaaa aagtgggcga tttaggtaaa
    17941 aaattgcaca ccgggcgtag ccgtaatgac caagtagcgg tggatattaa aatgtggtgc
    18001 aaggtgcaag cggtggcatt gcaagaaaga atccgagctt tgcaagagcg tttggtttcc
    18061 gttgccgaag aaaatcaaga gtcggtgatg ccgggctata cccatttaca acgagctcag
    18121 cctgtgacct tcgctcattg gtgtatggcg tattatgaaa tgctagaacg ggatttcagc
    18181 cgtttgagtg atgctaataa acgtatgagc acttgcccgc ttggttcagg ggcattggct
    18241 ggtacggctt acggcattga tcgtgactta ttagcccgtg atttaggctt tgaagaagcc
    18301 acacgcaaca gtttagacag cgtgtcagat cgtgaccata ttttagagct gctctctact
    18361 gcctcgatca gtatgatgca cctctctcgc tttgctgaag atttaatcat ttttaatagt
    18421 ggcgaatcag gcttccttga aatgtcggat cgtgtgacct caggctcatc acttatgcca
    18481 cagaagaaaa accctgatgc ttgtgagctg attcgtggga aatccggtcg ggtatttggg
    18541 gcattaaacg gtttattaac tacactcaaa gggttaccac ttgcttataa taaagatatg
    18601 caagaggaca aagagggtat ttttgatgcg ttggaaactt ggcaggcttg tttagaaatt
    18661 gcagaacttg tactggttga tattcaagtg aataccgaac gcacccgaga agccgctcag
    18721 caaggttatg cgaatgcgac cgagttggca gattatttag tggcgaaagg cgtgccattc
    18781 cgtgaagctc atcatattgt tggcgaagcg gtggtttacg caatcagcaa aaaagagcca
    18841 cttgaagcat taagcattaa cgaattccag caattccatc attcgattgg cgatgatgtt
    18901 tacccaattc tctcgttaga atcttgctta gaaaaacgtt gtgccaaagg tggagtgaac
    18961 ccacaacgtg tggcagaggc gattgcggta gccaaagcca atttagcttc aaagtaaaac
    19021 cggatacaag cggtcatatt ttgcaaaaaa attgaaaaat atgaccgctt gccgattaaa
    19081 ttttcaattt tttacgcatt aagattgcaa aataggcatt acctctttaa acttccgaat
    19141 aatttttgaa ttttatttct actactttct ttaaagagtt ttatatgacg gaatcagtta
    19201 attctactca agctggtaca gcactttctt tagggcaaca attaaaagcg gctcgtgaag
    19261 cgttaaatct ctctattaca gatgttgctc aaaaaaccaa cttaaaaaaa tcacatattg
    19321 aatcacttga aaatgatatc tttattctac aaaatgttgc cccaactttt gtgcgtggct
    19381 atgtgcgtaa ttatgtgaaa tttttgcgtt tacctgaatc ccttatttcg agcgttaatt
    19441 atggtgaagt cactattcca aaagaagtca ctaaagtttc ttcagtaaaa ccttcatcaa
    19501 attcacaagg taaaacctta aagtatttaa cggtattagt attgcttgcg gcattaggaa
    19561 tgacattact ttggtggtgg caagggtatc aaaaagaaca ggaaaatcgc gagcaatttg
    19621 ttagctctgc accagttgct gaagtggcga ataccgctac aaataatgat gcttcagcac
    19681 aaacttccgt gcctgttcag caacctattc aggtttcaga gcagcctgct caagtagcag
    19741 aaacggtagt tgcagcagaa ccggcattaa ctgaaaaagt agagcctaca caagcagcat
    19801 catcacctgt aacacaagaa gatgttaaag tggtagaaga agttaaacaa gctgatgcca
    19861 ccactgcaca ggttgaggca gttaatgttt tacagcaatc tcaatcggaa caagccccta
    19921 cagaacagcc tgttgcggta acgaatgatg agcttcgtat cgaaattacc ggttcacaaa
    19981 gctggattac agtgcggggt gctaaaaata aacgtttagc agaaaaatta tataacaatg
    20041 gtgagacttt aagtttcaat gagaatgagc aatatcgttt aaccattggt gcgcctgcca
    20101 atgtaaaagt gtactataaa ggtcaagaag taccattgaa aattgatggg cgtgtagctc
    20161 gtattcattt accgttacag taagcttgat ttaacgatga aacgcacgta aagctagcat
    20221 ttaacgatag ctgtctttac gagcgttttc tgtttttata aattttcaca attagctaaa
    20281 aatatgatac atcaatcacc tattaaacgt cgggtatcga agaaaatcta tgtgggtaat
    20341 gtgcctgtag gcggcgatgc accgattacg gttcagtcaa tgaccaacac ccgcacaacc
    20401 gatgtggaag ccaccgttgc tcaaattaaa tcgctggaac gggtcggggc tgatattgtg
    20461 cgtgtgtctg tgccgacaat ggacgctgct gaggcattta aagcgattaa acaacaagtg
    20521 agtgtgccat tggtggcgga tatccacttc gattaccgca ttgcgttgaa agttgccgaa
    20581 tatggggtgg attgcttgcg gattaacccg ggtaatatcg ggaatgaaga gcggatccgc
    20641 acggtggtag attgtgccag agataaaaac attccgatcc gaatcggggt aaatgccgga
    20701 tcattagagc gtgatttgca ggaaaaatat ggcgagccga caccacaggc attattagaa
    20761 tcggcattac gccacgttga tcacttagat cgccttaact ttgatcaatt caaagtcagc
    20821 gtgaaagcct cagatgtatt tctagcggtt gaatcttacc gacttcttgc aaaacagatt
    20881 gatcagcccc tgcatttagg tattactgaa gcaggcggag cgagagccgg ttcggtgaaa
    20941 tcggcggtag gcttaggtct gttgctagcg gaagggattg gtgatacctt gcgtgtgtca
    21001 ttagcggctg atcctgttga agaggtgaaa gtcggttttg atattttgaa atcgctgcgt
    21061 attcgctctc gtgggatcaa ctttattgct tgcccaacct gctcccgcca agaaattgat
    21121 gtgattgcga cggtaaacga gctagaacaa cgtttagaag acattatcac gccgatggac
    21181 gtttcgatta tcggctgtgt ggtaaacggt ccaggagagg cgttggtgtc tgatttaggg
    21241 gtaaccggca gcaataaaat gagcggcttt tatttagatg gcgttcgtca aaaagagcgt
    21301 tttgacaacg caaaattaat cgaccaatta gaagctaaaa ttcgtgccag agttgcacaa
    21361 caacataatc gtatagatat tgaacaaata ggataaatat agtggcaaaa acaattcaag
    21421 caattcgagg aatgaacgac tgctcaccaa gtgagtctcc attatggcaa tgggttgaac
    21481 agaaagtgcg taatgtgctg gcaagttacg gctattcgga agtacgtatg ccgattgtag
    21541 aaagcactcc gttatttgcc cgtgccattg gcgaagtaac cgatgtggtg tcgaaagaga
    21601 tgtacacgtt ctgggataac gatgagcaat taacgctccg cccggaaggt acagccggtt
    21661 gtgtgcgtgc agcgattgag cgtggttgga tctacaataa tgagcaacgc ttatggtata
    21721 tggggccgat gttccgccac gaacgtccac agaaagggcg ttaccgccaa ttccaccaag
    21781 ccggtgttga agtgtttggc attgcaaatc cggaaattga tgcggagttg attattctca
    21841 ccgcacgcct atggaaagag ttaggcatcg atcaacatgt ttctttgcaa cttaactcta
    21901 tcggctcgtt agaagctcgt gcaaattatc gctcagcatt agtaaaattt ttagaaaatc
    21961 acaccgcttt aatgaacgaa gaagagaaag agcgtttggt gaaaaacccg ctacggattt
    22021 tagataccaa aaacgaagca ctacaaaatg tattaaacga tgccccaaaa ctgctcgatt
    22081 atttagatga tgacagccgt gaacatttta cccaactttg tgccttactt gatgcaatgg
    22141 gaatccgtta cgaagtcaat ccaaaattgg tgcgtggttt agactattac aataaaaccg
    22201 tgtttgaatg ggtcacttca gccttaggct cacaaggcac cgtatgtggc ggtgggcgtt
    22261 atgacggctt agtcgaacaa ctcggtggac acgcaaccca aggcgttggc tttgcaatgg
    22321 gcttagagcg tttagtgctg ttggtacaag aggtgaataa agagattgat ttaccaaaaa
    22381 cggtggatgt gtatatcgta ttctccggtg aaggggcaac actaaatgcc ttccaacttg
    22441 cagagcagat tcgtagcgaa ttgccacacg ttggcgtaat gacacactgt tccggcggta
    22501 aattccaaaa acaatttaag cgtgcagata aagtagaagc gcaaattgcg ttagtgattg
    22561 gcgaaagcga agtggctgaa aagcaagttg ttatcaaaga tttacgttca ggagcagaac
    22621 aaatcacgat tgctcaatca gagctgattg ctgagctatc taaacgattt taggagaaaa
    22681 agatgagtaa cgaatattta aataaaaccg aagagcagca atttgaagat gccaaaaatt
    22741 ggtttaaaga gaacgggaca ccgattttgg tggcgattat tttagcttgt gcggcaactg
    22801 ccggctggaa tttttggaaa aatcaccagc ttgaaacggc acaaaaaaca tccgcttcat
    22861 accaaagcgt gatggagagt tatttgcaaa atccaagcaa aaatcaaccg cttgttgaga
    22921 aatttattgc cgataataaa gattcaagct atgccgcttt tgcccaattt gaagtagcta
    22981 aacaagcggt cgaaaaaggg aatttttctg cggcaaaaac agcgttacag tcagttttga
    23041 cttattcgga ttcaacctta caatctatcg ctcgttttcg tttggctcaa attgacttcc
    23101 aactaaaatc ttacgatgaa gcactggcaa gtctggctca aattcaagat aaagcgtggg
    23161 aattgcgtaa gcaaattcta acaggcgata ttcttgcagc aaaaggcgat attcctgcgg
    23221 cgaaaagtgc ttatgagcaa gctaaaacga ccgcaaatcc tcaggaacaa accttaattg
    23281 atgtacgttt gaataactta taaaaacaaa gcctgattga aataaaatca atcaggcttt
    23341 tttgttggtt tagtgttgct gtgaattata aacgcattgg cataatcaca tattcggcag
    23401 agctgttgtc gcaatcttca attaagcaac tagaacttga atcaactaag ctaaaacgca
    23461 cacgttggca ttttaaggtg tttaacacat ctaatacata gctaacgtta aagccgactt
    23521 ccatttccgg gctgtcgtag gcaacatcaa tgatctcttc cgcctcttct tgctccggat
    23581 tgtttgcggt aattttgagt aaattattgc ttaaggttaa acgcacccct ctaaatttct
    23641 cattagaaag aatcgctgca cgcattaatg cccgtttaag ggtttcggtt tccgcttcta
    23701 gaatgcgatc tgcattgcga ggcagaactc ggcggtaatc cgggaatctg ccatcaatca
    23761 gtttagaggt aaatacaatg ccgttcattg taatacggat attgcttgaa ccgatttcca
    23821 aacgcacggt ttcatcgttg ctggcaacca agcgggaaag ctcaagtacg gctttgcgtg
    23881 gcacgataac cgaatgagtc aaaagctctt gatttagcac cattgtgcaa accgctaaac
    23941 ggtgcccatc tgtggcaacg gtgcgtaata aattgccttc ggtttcaaat ttcattccgt
    24001 ttaagaaata acgggcgtct tggtttgcca ttgagaattg ggtggcatca atcagacggg
    24061 caagggtaga ttgatcaatc gagaaatcca cttccggttt ccaatccatc aaattcgggt
    24121 aatcacttgc cggtaatgta gctaaactaa atttactacg tcctgctttg ataatggctt
    24181 tatcttcttc aaattgtacc gaaatcacgc tgtcatcagg taggctttta ctgatatcta
    24241 ggaatttttt agctggaatg gtaaattttc cggcaaaatc gaccgcttgt agcagttgtg
    24301 cttgggtggt taattccact tctaaatcgg taccggttaa agatagacga ttaccttcaa
    24361 tttctaataa aagattgtta ataacaggca aagtcggacg gctacttaat acgccacaca
    24421 cctgttgtaa aggcttaagt aattgttctc tggtaatggt aatttgcata atcattcctt
    24481 catcgggcta agatgataat ttgcgtgtta aatggatata atcttcttgg ataccgcttt
    24541 cggtatcgcg taattcatta atggttttgc aggcgtgcat cacggtagta tgatcccgac
    24601 cgccaaattc ccgaccaatt tccggcaagc tgtggttggt tagctctttt gccagtgcca
    24661 ttgccatttg gcgaggacgg gcaatgcttc ttgcccgact tttcgattta atatcggcaa
    24721 cttttatgcc gtaatattcg gccacaatgc gttgaatatt ttcaatcgta atcaagtaat
    24781 caaaagaggc aaacagatct tgcaaggttt cacgcaccgc atcaaccgta atcgggcgaa
    24841 gggtcaattt ttgccacgca atcacacggt ttaatgctcc ctccaattca cgcacattgg
    24901 ttcggagttt ttgccccatt aaataggcgg catcttcttg caaatctgct ccacgttcta
    24961 aggctttttg gcgaagaatt gccactcggg tttccaattc aggtggctca atggtcgcac
    25021 taataccgcc gcttaaacgg gatttaatcg ctgtgtcaat tttatcgata ttttttggca
    25081 aaacgtcaga ggttagaata atctgctttc tctgctcaaa taaagcattg agtagatgta
    25141 aaaactcttc ttgtactttc ggtttattgg caagaaattg aatatcgtca atcattaaca
    25201 catcaagcga gcggtagaat tttttgattt tttccgcatc gttattggaa ctgttgatcg
    25261 ccttaataat atcacgataa aaacgttcca aatgaatata tagcacccga gtacccggtg
    25321 tgcgtttaac taattcattg ccgatagcgt gtaataagtg ggttttgccc aaaccggtgc
    25381 cggcataaaa cgagagtggg ttgcaatggc tttcgcctaa attatccacc acttgttgag
    25441 ccactaattt agctaattgg tttgagcgac cttgtacaaa attatcaaag gtttgatttg
    25501 gatttagccc ggttttaaag ccggtattgc tgaattctga actctcgttt tttagatttg
    25561 ggctgacctt tggctgttct gtcggtttaa tcccaacttt taacgtaacc accaaattat
    25621 catttttcgc caaaaaacgg gcaagctcgg taatttccga taaaaattta tcttttaccc
    25681 agttttcaac aaattgattt tgtgcataaa gtgtaagttc cccattctca gaactcgctt
    25741 gcagaggacg cagccaagtg ctgtaatcag ttggtgagac tttcgtttgt aagtgattaa
    25801 ggcaatcaga ccaaagggaa gacacaattt gctccaaaat tattgttatt aaaggtcata
    25861 atgatacctg aaaaaagggg agaaatcttg caaatttttg agagatttta tgggggcttg
    25921 gaagcgattt taattggcga acaagcggtc gttttttgtt gaaatcttgc aaattgctaa
    25981 caaaaaatga ccgcttgctt agtatgatgt gtgatggagt tgattaaata tccgtattct
    26041 ccggcaagaa cccaccgctt tggtgagccc aaagtctggc gtaaacaccg ttttgagcaa
    26101 gcaattcttc gtgcgtgcct tgttcaacga tttcgccttt atctaacacg ataagtctgt
    26161 ccattgccat aatggtagag aggcggtggg caatcgcaac cacggtttta ccttccatta
    26221 attgcgtgag attttcttga attgccactt ctacttcaga gtctaacgca ctggttgcct
    26281 catcgagtaa taaaatcgga gcgtctttta gcatcactcg ggcaatcgca atccgttggc
    26341 gttgtccgcc ggaaagtttt acccctcgtt cgccaacgtg tgcatcaaaa ccggttctgc
    26401 ctttggcatc ttgcaggttt ggaataaatt cactggcggc agcttgttca acggctttga
    26461 tcatctcttc ttcagtggcg tttgggcgac cgtacatcaa gttttcacgc acagagcggt
    26521 gtaacagcga ggtgtcttga gttactaaac caatttgtga gcgaaggctt tcttgggtaa
    26581 tatcacggat attttgcccg tcaatcgtga ttgaaccgtc ttgaatatcg taaaaacgca
    26641 ataataaatt ggtgagcgtt gatttacctg caccactacg cccgactaag ccgacttttt
    26701 cccccggttt tatagtgagg tcaaaatctt tcagtagcgg ttttttcgga tcgtaggcaa
    26761 aatccacatt ctcaaattta atttcgcctt tggttacatt taacggtttc gcatcgattt
    26821 tatctaccac attgtgtggt ttggaaagcg taatcatacc gtcttgtacc gtacctaaat
    26881 tttcaaatag acgagcaaat tcccacataa tccattgtga taagccttta atgcgtaaag
    26941 ccaaagcggt tgaggtggca atcgcccctg cagttactac gcttgaaccc caaagccata
    27001 aaccgatacc cgcagttgaa attattaatg ccatcgaggt tagattagtt acggtttcaa
    27061 ttacagtcac taaacgcatc tgtttatgca ctgtcaccat aaatccttcc atcgactctt
    27121 tcgcataggc agattcacgg ttgccgtgcg agaagagttt gacggtggca atgttagcgt
    27181 aagcatcggt aattcgaccg gtcattaaac ttctggcatc cgattgctct tgagcagctt
    27241 gggctaattt cgggacaaag tagataatgg ttgccgctaa tgagatgacc cataaaataa
    27301 acggcacgaa taaccagccg tcaagttgta ataaaatcac gctggaggtg gtgaagtaaa
    27361 ccagcacata caccaacata tcggcacaag tcataatcac atcacgcacg gaaagggcgg
    27421 tttgcattac ttttgcagac actcttcctg caaattcgtc ttgatagaaa cctaaacttt
    27481 gcccaagcat taagcggtgg aagttccaac gcaaacgcat tggaaatacc ccttgcagag
    27541 attgaaagcg aatgctgctg gcaaggtaaa caaacaccac tgcaagtagg gcaataaaaa
    27601 acataccgat aatcgtccag cctttttctg cccaaagttc tgttggcgag tatttattga
    27661 cccaatcgac taaatcgccc ataaagcgaa acagaaccgc ttcgataata ccgacagctg
    27721 caactaatac ggtcagtagt aagatataaa accgcattcc tttagtggca tcgtaaataa
    27781 aaggaatgag acctgatttt ggagttttcg gcatttcatt tggataggtt tccacccttg
    27841 cctcaaacca tttaaacagt ttttcaaaca taaatttgtg atttccgaat aaaaatgcag
    27901 gggcaaatag ccatttgccc ccgaaaaaat gtgaaaaaat tatggattaa gtaatttttc
    27961 gtctaaggct aaatcttcgt tgcgatttat accaatgccg gcagctaata cgttgcgggc
    28021 aatttgatgt gcttctttta aagaatgctc tttgtaagag ccacattgat attcattcag
    28081 ctcagggatt gccgatacat caggaatttt atgtaacgca tcttccattg atgccgtcca
    28141 agctttgaca acttcttctg ctgaaggcga tccaatcagt gacatataaa aaccggtacg
    28201 acaacccatt ggtgaaatat caatgatctc cacttgttcg ctattgaggt gatcacgcat
    28261 aaaaccggca aaaagatgtt ccatcgtgtg aatcccacgc accggtagaa tatcaatatt
    28321 cggacgacag aaacggagat cgaacacggt aatggtatcg cctttcggtg tggtcattgt
    28381 ttttgcaaca cgcacggctg gtgcgttcat tttggtgtga tctactttaa aactatctaa
    28441 taaaggcatt ttttactcca tcaatattat tccgcaattc cttgatccca agccggggct
    28501 tcatcaggta gtttgcgctg taagaaaaat cgtctgtttg gctgggcttg aggcttcacc
    28561 actttagtgt aaggggtaga gaactcaata ccgccattta ataactgcga cattgtgccg
    28621 gagttcatac ttacaccttg caggctcacg tccatagtgt aacctgaagc ttgccagaat
    28681 tgggtattgg ttctgactaa gtgcttgtat ttatcttgaa tattgacata aataagcact
    28741 cgatcgccta actcacttag ccctaaacgg ctgactattc ccacctgcat tccacggtaa
    28801 agcaccggtg cttccggctg aataccgtta gcattggtgg tttcgacaat aatggggaaa
    28861 ccgttggcat aggtggtttt taccgtatcg gtatctgcaa gaacaaattg gttttgagct
    28921 tgccctgaac cgacatcaac cgtaatgtaa ttttgtagtg ctgcatctaa atttttaaag
    28981 ccggaggtac tgatttcagg cgagataaca ttaaatttac tgccggcttt tgcaattaac
    29041 ggatagtatt tcctttgaat gtaagcggtc gcttttatct gtttttttgc attttgtagc
    29101 tcaagttttt caatttgacc tacggttaag cccatatatt taatgtccat tccttcgctt
    29161 aacttactcg catcttttgc aatcagcgtg agataagtat tgcccgaagt ggctttctcc
    29221 ttacttgcat aaagcgtttt attgcctttt gaaccgccat catcaaagct gatcgcccct
    29281 tttaaggtac gcattaatgg agctgtagtg atattcacgc ctttgagtga cacatcaaca
    29341 ctcgttgccg gctcaatcca gaaacggctt ttctcggtta atagatgacg ataatttggc
    29401 tggataaata gctcaacctc aaatttttgt tgtttcgggg ttatttttaa cacctcgccg
    29461 acctgaaaat cacgatatag caccaaagag ccttcgctga taccagataa tgaatctgcc
    29521 gaaagggtag tggtggcttt tttatctaag gtagccatgc ctgattccgc actttctata
    29581 tctttataaa gtgcatattg ttttttcggg ctaccgtcat ttttaccgtt aattaagcga
    29641 acaccgcctt ttaaccattc agatggtgaa ccggcgtgaa ctcttaaccc atctagcccc
    29701 accgacatat caatgttgga tatcgcaaca aatttgctgt tactcccaat caggttgcga
    29761 taaggcggat aaataatgac atcaaaacgt actttgtcta actctaggct acgtttgacg
    29821 atttctccga tttgcacatc gctatagtaa atcccctgat tggtatctac cccataggct
    29881 tgaggagcaa ttaagctaaa gctaagtaaa ttcggtaaac ttaatagata atcggcttcg
    29941 ttttgtacca caaattccga ttgaggttct ccttcccccg ggtgaacctc aaaatagaca
    30001 ccacgcagca gctcacctac tttcgtcagc tgctctgtgt ttaaggagaa tttcggctct
    30061 ttgagcaaga ttttagtttg ggaacgtagt aaattttcat aacttgggtc aattaataaa
    30121 accccatcaa tctgtttatg ctgccctgat tcttgctgtg gcacaccgtt gtcttttact
    30181 tgcggtaatt ttagctgcga aagcatacca atttgcacat tttggtgaaa aacaccagtc
    30241 tcattaattt ttaaattatg tgtaagcggt agttttacgt tgatttcaat tccacgttta
    30301 gctgatttca aatccggata tagctcaaat ttctgtcctt gctcggcaat ttccatatta
    30361 tcaggcgaat caaaagcaac cgcaccttgt actaccgagg caaggctgtc catattgatt
    30421 ttaatacctt gtaaatttac atcagcgcta ataccgctaa tattccaaaa tcggctctct
    30481 ttttttacta aatgagcgta tttttgatta atgacgacat caatttcgat ttttttctgg
    30541 tctttggtaa aacgataatc ggcaatatta cccactggca ctttacggaa ataaacactc
    30601 gctccgacag taatagagcc tatgtcatca gagattaaac ggatcagtaa atcgccatcg
    30661 ctcacggtaa tagccggagg atcttcttct gcaataaatt catcaacgaa atcgccttca
    30721 ccgggaagta gggtaatata gttaccagaa acaatcgcat ctaagcctga aacgccagcc
    30781 aaagaagcac ttggttgcac taaccaaaat ttagtctgtt tgcgtaaaat acttttggct
    30841 tcagggttta tttctgcttg cacttccact tcttttaaat tatcgacaaa ataaacacgc
    30901 ttaacctgac caatctgcaa gccttggtaa cgaatagcgg tttttccggc agtaatgcca
    30961 tcacctttac taaatcgaat cgtgattgtt tcaccttgct cttttaaaat ttggaaaaat
    31021 agcaaagcac caataataaa agcaactatt ggtaacagcc aaaaaggaga aattttgcga
    31081 ggctgccgga tttgggcatc tacaacagtg tgggtatttt cttccatcgt cattttaaat
    31141 tagggaaacc tatatagaac aataccgaag acccaaaggg acttcggtaa tagaaataag
    31201 tcaaaataag aaatattatt ttttctcatc acagttggtt aaattactgc atttaccata
    31261 cagatataaa ctgtggttag tcaattccat tccgtgtttt tcactgattt cacgttggcg
    31321 acgctccata tcaggatctt taaattcgaa caccttacca caatccatac aaataatatg
    31381 gtcgtgttcg tggttcatat ttaattcgaa tactgcttta ttcgcatcga aattatggcg
    31441 ggttaaaatg ccggcttctt caaattggtt taagacacga taaaccgttg ctaaaccaat
    31501 gtctgagcct ttttctaaca gaatcttata aatatcttct gctgcaaaat gttgcatttc
    31561 atcacgaata tcttgcatta atgcaaggat agtcaaacga ggctcggtta cttttaagcc
    31621 tacctctttt aaacgtttaa tatttgcttc agacatatat gccacttatt tatctttatc
    31681 caaaatagtt attatgcgag ttggtctaag cacatttctt ctttcaactg ctcgcaccat
    31741 ttattaacac gttcagtggt taattcaggc tgacgatctt catcaataca taagccgaca
    31801 aaagtatcat catcaactaa ggcctgagaa acctcgaaag tgtaaccggc agttggccaa
    31861 tgaccaacaa tcacaccacc atttggctct accacatcac gcacagtacc cattgcatca
    31921 cagaaatatt ctgcataatc ttcctgatca ccgcaaccaa aaattgcaac gactttgccg
    31981 ttaaaatcaa tctcttttag ggtaggcata aaatcgtccc aatcggcttg cgattcacca
    32041 taataccaag ttgggatccc aaacatcaga aaatcgtatg cttcaatatc ttcttttgtg
    32101 cttttggcaa tgtctcgaat atcaattaat tcagccccta attttttctg aatcattttt
    32161 gaaatatttt ctgtattgcc tgtatcgcta ccgtaaaata aacctacaac tgccattgct
    32221 actacctatt tgtgagataa ttatttagaa ttgtttcaat taactgcccg cgtgaaacac
    32281 cttgttcaga cgcctgttcc tctaataact ttactaaatt cgaatgcagt tttaattcta
    32341 cccgttttaa accggaagat ttatctcgtt ttagttggtt acgtttattg attcgaagtt
    32401 gttgttctct atcaagagga tttgtacgag gacgcccaac ttttggtaca gtcgcaaaca
    32461 gatctaaggt tatacaatct gaatcttgtt ttgccatttt gttttactat tgggctttag
    32521 ctaatcctca gttttaatga gaatgataag ctacttttaa agtgtgaact atatcaaaag
    32581 ttcaatcatt tgaaaagtaa attacaggca aaacaagcgg tgtttttagg tttaaaattt
    32641 gcaaaaacca taaattacac attatgagtt atgatttttc tgaagcgtga aattagctta
    32701 taatgaaacc gaataacgtt atgaaaaagg agatagtgtg tcgaatatcc atttagcgat
    32761 tgccgctgat tttacgctgg cagaaaaatt acttgaagca ttagcaaatc aagatttagg
    32821 gattgaaaat atttcagccg ttgagcttga gccgtttggt gaagagcaga atttacgctt
    32881 tggggcaaaa gcagtcgcac aatatgcgtt agatgaagta aattgggcgg aatttagcca
    32941 tgttctattt gccggcaaaa tggcacaagc ggaagtgttg gcagaagcgg tgaaagccgg
    33001 ctgtgtgatt ttagatttat acggcattac cgcactcatc ggcgatgtac cggtagttgt
    33061 gccaagtgta aatgatgaaa atgtcgcaaa tttgcgtgag cgaaatatcg ttgctttagc
    33121 caatccgcaa atttcacaac tggcgttagc cttaaagcca ttgttgaacg agctgttaaa
    33181 acaggtgtgg gtaacctcac ttttaccgtc tgcctatttt ggcgatgaaa aagtcaagga
    33241 gcttgccgga caaactgccc gtttgttaaa cggcattccg tttgatgaaa atgcggaacg
    33301 cattgccttt gatgttgtgc cggctaatgt gcaaggagaa gagaaaagtc tgccgttctc
    33361 aaaagccttt gaactgcaaa ttgcaaaagt tttaccaaat ttgaccgctt gtactacctt
    33421 ccacagcgtg caagtgccgg tcttttatgg ggtttcccaa atggtgtcgg tgcagtctga
    33481 atatcagtta gatgctaatg cgttaagtga agcttggaaa gccgaaaatt ggctgaattt
    33541 taatgaaaat tcagtgatta cagcggtgaa aaatggcgaa aacgaagagc aaaatgcgtt
    33601 agaaatcagt cagttattgg cgaaatccga acaggaagtg cagttctgga cggtcgccga
    33661 tgaacagcgt ttcagtctgg catttttagc ggtgaaatta ctaaaattag ttttagcgta
    33721 ttaagtgctt gcaaaagtat ttattccgtg ataaaaatcg tcaacgcccg agcaaccgat
    33781 tgcttgggcg ttgtcatttt gtttaaacac cgaaggtctt atgttagaaa aattatttca
    33841 gctcaaagca aaaggcagta atgtaaaaac cgaaattatc gccggtatta ctaccttttt
    33901 cacaatggtt tatattgttt tcgtcaatcc gtctatttta ggcgtggcgg gaatggacac
    33961 ccaagtagtg ttcgtgacta cttgtttaat tgccgctttt ggtactatcg caatggggtt
    34021 attcagtaat ttaccgattg ctcttgcacc ggcaatgggc ttaaatgcct tttttgcatt
    34081 cgtagtggtg caaaaattag gttactcgtg gcaagtgggt atgggggcga ttttcttagg
    34141 ctctgtcggc ttattcctat taactgtatt acaagttcgt tactggttta tgtctgcgat
    34201 tccacttggt ttacgtgtag gtattggtgc cggtatcggt ttattcattg ccctaatcgg
    34261 ttttaaaaat atgggcttgg tggtgccaaa tccggcaacg cttgtggcac taggtgattt
    34321 gcacgacccg aaagtgttaa tggggatttt aggctttttc atcattgttg tattagcggc
    34381 gaaaggtatt cactcaggcg tgttaatttc aattgtgatt gttaccgctc ttgccttagc
    34441 ctttgacccg gcggtgagct ttaacggcat aatgtctatg ccaccaagcc ttggggcagt
    34501 tgtggggcag gttgatattg ccggtgcttt tgatgttgcc ttactcggga tgattttctc
    34561 ctttatgttg gtaaacctgt ttgactcttc cggcacctta attgcggtga ctaccaaagc
    34621 aggctttgcg gatgaacaag ggcgtttccc gaaaatgaaa caagctctgc tagtagatag
    34681 taccgctgca atggcaggct cttatatggg aacttcagcg atttctacct atattgaaag
    34741 tggctccggc gtttcagttg gcggtcgtac cggcttaact gcggtggtag ttgggatctt
    34801 attcctatta accattttct tctcaccact tgcagggtta gtacctgcct atgcaactgc
    34861 gggggcattg gtatttgtag gaattttaat ggcatctagc ttaattgaag taaaatggga
    34921 cgatttaact gaagctacgc cggcatttat tactaccgca atgatgccgt ttacttactc
    34981 catcactgaa gggattgcat tcggctttat cagctactgc gtaatgaaag cctttacagg
    35041 gcgttggaaa gaaatcaacc tttctgtttt agtggtttca cttctcttta ttgctaaatt
    35101 tgtgtgggtg ggttaagctc tacccccctc tccctgattt ttcttctaaa cgaagaaaaa
    35161 tctatccctc tcccacaaag gggagagggt atttgattca ttatctatgt gtttcgtgta
    35221 ttccgaggta aaacaatgtc taattcagtt caaaaacttc tttttatcat caattctgct
    35281 ccttacggca atgaaacgtt tttcagtgcg ttgcgtttgg cattacaaat tcaagaacaa
    35341 cataaagcca atacggaaat taaacttttc ttaatgtcgg atgcagtcac cgcagggctg
    35401 gcaaagcaaa atccggcaga gggttatcat attcagcaaa tgctggaaat tttaaccgcc
    35461 caaggggcaa acgtaaaatt atgcaaaacc tgtactaatg ctcgagggat tacagatttg
    35521 cctttagccg atggggtaga gattggcaca ttaattgaac tggcagattg gacaattcaa
    35581 gcagataagg tactgaattt ttaatgcaaa atattgatgt tgtggtgatt ggtgccggtg
    35641 cggcagggct gttttgtgct gcccaactgg ggcaagctgg caaaaaagtg gtggtgttag
    35701 acagcggtaa gaaagtcgga cgtaaaattt taatgtctgg cggtggtttt tgcaatttta
    35761 cgaatttaga cgtaagtgcc ggaaattacc ttagccaaaa ccgccatttt gtgaaatccg
    35821 ccctttcacg ttatacccaa tgggatttta tttcgcttgt cagccactat ggcattagct
    35881 atcacgaaaa agagctaggg cagttgtttt gtgatgaaag ctcgcaacaa attgtcgatt
    35941 tactacaagc agaatgcaac aaaggcaagg ttgagattct gttacggcaa gcggtcattt
    36001 ctgtggaaaa agttgcaaat ttttttgaaa tttcgaccgc ttgtggcaag ttccaatccg
    36061 aacacttagt gattgcaacc ggagggcttt caatgccggc tctcggggca agcccttttg
    36121 gctatcaact tgccgagcag tttggtattc ctgttgtgcc accacgtgca agccttgtgc
    36181 cttttacttg gaaagagagc gataaatatt ttgccgagct ttccggcatt gcactgccga
    36241 ttactgtttc cgccaatggc aaaagtttta gcaatcagat gttgtttacg cacagaggct
    36301 tatccggccc ggcaattttg cagatttcca attattggga attgggggaa acggtagaga
    36361 ttgatctgct accttcgcag tccattaccg atatattgag cgaactacgc caatcttcgc
    36421 cgaaattaca gctaaaaacc gtattatctc gttatttacc taaaaaattg gttgaagttt
    36481 ggctggaaca gaaattgctg accgataaag tgattgccga tttgagtaaa aaagatctga
    36541 ccttattaga gcaatttatc caccattggc atttcttgcc aaacggcacg gaaggctatc
    36601 gtacagcgga agtaaccaaa ggcggtgttg ataccgacta tatttcatct aaaacgatgg
    36661 aagcgaaaaa tacagcaggg ctttatttta tcggcgaagt gctggatgtt accggctggc
    36721 ttggtggtta taatttccaa tgggcgtggt catctgcttt tgcctgtgca gaagggatta
    36781 ttgaaaaaag caaataacta aaaaagcaaa taactaaaaa accaaacaaa aaggcgaaca
    36841 caattgttcg ccttatttta tgctgaatta tcttgcacgg aaaataatgc gtgctttgct
    36901 taaatcgtat ggagtcattt caaccgttac tttatcaccg gttaaaatac gaatgtagtt
    36961 tttacgcatt ttgcctgaaa tatgtgcggt aacaatatga ccgttttcta attccacacg
    37021 gaacattgta tttggtaagg tttctaaaat cgtaccttgc atctcaatgc aatcttcttt
    37081 agccatttat tcctctttaa agttttaatt tttatatgat gccattcggc gaaaaacggc
    37141 ggatattata cgcttattcg ctcaaattac aatcgtttat ccatttgagt gtaaactatt
    37201 tacgcttaat ccaacggcga cgtgagtgaa aacgctgggt ttgggttttt acttgactca
    37261 taagtggttt tgggcttatc tgtacatgat gaattttacg acgaaaatag tagttaatgc
    37321 tacttgccaa caatatacct gtgagtagca aaataattat ttccccataa agttgatgaa
    37381 attgttgctc tactcgtgct ttagtagttt gcccatattc tgcatcaaac gtgacgcgta
    37441 aaaagccaac caacgcctgt tgagaaaata ttggctcaac aatttgctga gttttggcag
    37501 attgctctga atcgagcaat acttttaaat ctttcgcatt ttggctttga gccagtagca
    37561 cgccatttgg tgaatagata ttggcatcaa taataaaatc ttctttggca aaactatcca
    37621 acgcatcaac cagctcatcg gttttggcat ttttaactaa caaaaacgaa aaaatatttg
    37681 cttgctggcg aaccaatagg tgtgaaaggt ttgatacttg attaatgctg gccaattgtg
    37741 agcctagctt aaattggttt acgcccatta aaataaccgc cacgatccca cagcagagta
    37801 gcgtaatccc tgccagcaaa agcgttttcg ttattttttc acgactaatg tacatcgaaa
    37861 ttccctcaaa atgatgcgtg attgtagcac gcttttctgt tagattagtg cagtaaattt
    37921 aaacaaccta aaataagaca atgacaaaca caatttttat ctattcaaaa accttaaacg
    37981 agcgtgaaat tgaacagttt tcacaacaaa cggcagcaat tttgctgaaa caagcggtct
    38041 atttagacta caaaattgca tttttttcca caaatttaac cgcttgcgag ctgcgtgaaa
    38101 cggcacagaa aatcaatgcg gatattagcg atctcactat tattccaacc ttaaaccaag
    38161 gcggtttgct attaatggat atggattcca ccgctattaa aattgaatgt attgatgata
    38221 ttgccaaact tgccggcacc ggcgaggtgg tgtccgccat tactgccagt gcaatgcggg
    38281 gcgagctgga tttcgagcaa agtttacgca agcgagtcgg cacgttggaa aatgcatcgg
    38341 aaagcatttt gcaaaaagtg cgggaaaatc taccgcttat ggacggcttt gagcagatgg
    38401 ttgctattct taaggaacac ggctggaaat tagcgattgc gtccggtgga tttgattact
    38461 tcgccgatta cttaaaacaa aaatacgggt tgaattttgc ggtctctaac caactggaaa
    38521 ttattgacgg taaattaacc ggcaaggtgt taggcaaagt agtggatgct caacataaag
    38581 ccgatacctt acagaattta gcgacaacct ttaatattcc accaaatcaa tgggtggcag
    38641 tcggcgatgg ggcaaatgac ttaccaatgt taaaaaccgc cagtttaggc gttgctttgc
    38701 acgctaaacc aaaagtgcaa gcacaagctg attttgtggt aaacttcggg gacttaacgg
    38761 cattatgttt attacttaat gccaatcatt tatttcaaca ttaattgaga ggaacaacaa
    38821 tgccatcatt tgatattgta tctgaaatca cgatgcacga agtgcgtaat gcggtagaaa
    38881 atgccaatcg tgtattaagc acccgctacg atttccgtgg ggtggaagcc gttattgagt
    38941 taaatgaaaa aaatgaaagc attaagctca cgaccgaatc ggatttccaa ttagagcagt
    39001 taattgagat tttaatcggc tcttgtgtaa aacgtgggat cgagcatagt tcattagata
    39061 tccctacaga aagtgagcat cacggtaaac tctattccaa agaaattaag ctcaagcaag
    39121 ggattgagtc agatatggcg aagaaaatta ccaagctgat taaggattct aaaatcaagg
    39181 ttcaagccca aattcaaggc gagcaagtgc gtgtaacggg caaatctcgt gatgatttac
    39241 aagccgcaat tcagctagtg aaaggggcag atttagggca gccattccaa tttaataatt
    39301 tccgtgatta gcaattcctg caattaatga tgacaagtgg aaaaattcag caaaatttga
    39361 ccgcttgcat taataattca acataaaagg aagagatgat gagcgagcaa acagaaaaga
    39421 aaggctggtt taaaaaagcc cttgagaaat atgatgcctt ttgcgatgag ctaggggtaa
    39481 atcaaggtgc ttgccgaggt tgtgtccctg tggtgaagtt tgaccctgaa ccggaaaaag
    39541 agcagccaga aaaatcagaa aataaaacat agaaaaaatg cacaatggta agatacattg
    39601 tgcatttttt ataggatttt taattggcgt gatgatgggc aaaatattgc ttaactccgc
    39661 catctttctt gcaaggattc tgaatatcag tagagtaact accgttaaaa caaagagcag
    39721 tagcattcga tggtttaatc ttttcctgtt tagttagggc tggcggttga gtattggttt
    39781 cactaatata gatcgtttta ggttgagaat agtctatatt tttgtcgcca tttacgactt
    39841 gaacgggggt gttcgagctg caagctacaa ccgatgctga agccaatgta agtataatga
    39901 tatggtgttt tttcatgggt aatttccgtt tttatatttt taattgagag aatgttaaaa
    39961 agggctgatt tctcaaccct taaagttatg ccttaagcat ttttattaaa agtttgtcct
    40021 aactgaattt catcatttaa tacaggaatt aactgctcta gttgatcttt ttcaaattcg
    40081 ctgagattgc cgataggtag aactttttcc acaccatttg tacctaaacg aatcgggtaa
    40141 gcaaagaatg ccggagaggt ttcgccattg gcattatcta cataagcata acgaatgaca
    40201 tcttccccga ttaaggctct cactaaacca agtgcaaatt ctgctcctgc ttgagccata
    40261 gataaggttg ctgagccacc acctgctttt gcctcaacca cttcagtacc ggcgttttgg
    40321 atacgatgag ttaattgctc gatttgttct tgagtgaact caagttttaa gccatttact
    40381 gttgcttgtg aaagcagtgg aagaatagtt gtgccggaat gtccgccaat cacaggcact
    40441 cttacatatt tcacatttac gtctttcgct tcagccacaa aggtattcgc tcgaataaca
    40501 tctaatgttg taacaccgaa aagtttattt ttgtcataca caccggcttt tttcaatact
    40561 tctgccgcaa tcggaataat ggtgtttacc gggttagtaa taattgcaat gcaagcttta
    40621 gggcaaactt tcgctgcttt ttcgactaag ttatgcacga tagtggcatt cgtattgaat
    40681 aaatcggcac gtgtcatccc cggcttacgg gcaacaccag cagaaataac gaccacatcg
    40741 gcatctttta gtgcctcagt cggatcttca cctgcaaaac cggttacttt tacatcagtt
    40801 ggaatatggc ttaaatccac tgcaattcct ggagtaacag gggaaatatc gtaaagagat
    40861 aattcagatt tagccggtaa attgagtttt aataataagg cgagtgattg accgattcca
    40921 cctgcagcac ctaaaagggc aactttttta ctttgacaca taaaatttct cctaaatgtt
    40981 atggaagttt agaccaattt agtctaagcc aattttttgg gcgattcaaa cggcaaatct
    41041 catttttgag acatagagca aatttttagc tgatttttat gggttttatt gatttatttg
    41101 cataaataag caagaattat gaatattttt aagtttttgt gaataagagt gtgaaagtgg
    41161 acaagataga tagtttatca gaagcgttta aatcgctgtt aaaggaagaa aaattcggct
    41221 cgcaaagtga aattgttgcc gcactacaag agatgggctt tgataatatc aaccaatcca
    41281 aagtttctcg aatgttatca aaatttggtg cagtcagaac ccgtaatcct aaaatggaaa
    41341 tggtgtatca gctaccagtc gaattaagtg taccgactac ctccagccca cttaaaaatt
    41401 tggtggtaga tattgatcat aatgatgcgt taattgtggt caaaaccagc cccggtgcgg
    41461 ctcaactgat tgcacgtttg ctcgattcaa tgggtaaagc cgaaggtatt ttaggcacta
    41521 ttgctggcga tgatacgatt tttataacgc cggtacgcaa tgtgcaaatt gaaaaattgg
    41581 tgaagaatgt gacacagtta tttgaaacat cattatagaa taagtaaagg aggacttaat
    41641 gttctcctta ttttttagga gattattatg cacattttta taacaggtgg tacgggtttt
    41701 attgggcgtg aattaatcca gcaattaaaa tctgaaaatc accactttac acttcttact
    41761 agagatacag aagcgaaaag tgatgattta cagattaatt attgctattc acttgatgaa
    41821 cttgttgatt taaatgattt tgatgcagta attaaccttg ccggtgagcc gatttttgat
    41881 aaacgttgga cagacgaaca aaaacagaaa ttgattgaaa gccgggttaa cctaacgaat
    41941 aagctcagtc aattaatgaa tgcaagctct aaccctccgc atacttttct ctccggttcg
    42001 gcaatcggga tttatggcga tttgcctcct tctgcaaatt tttatacaga atcgaccgct
    42061 tgttatcaag attgctttac caaccggctt tgccaacagt gggaagccgc tgcactaaaa
    42121 gccgcaagtg ataaaacccg agtgtgttta attcgtaccg gcacggtatt ttcgcccgaa
    42181 ggcggagcat taaagaaaat tttaccgctt tatcgatgcg gattaggcgg aaaacttggt
    42241 tcaggcaaac aatattgggc gtggatcagc cgccgggatc acgtacaagc ggtcattttt
    42301 ctgctcaaaa atgcaaattg ttcgggtgct tataattttg ttgcaccaaa tccggtgaga
    42361 aatgaagaat ttaatcgtat tttagcgaat gctgttaatc gcccggcatt ctttactgtg
    42421 cctgaatttg ccttgaaatt aggcttaggc gaacgagctt gtttagtctt agataatcaa
    42481 cagctcattc cggaaaaact actcgcagcc agttttgtat tccaagatcc gattttaacc
    42541 gagaacgttt tcttaaaccc ataatttagg ctataatgct gtataaaagc acagattaaa
    42601 aggtgattat ggatttctca ttattattag acggtttaaa tgacaagcag agggaggcgg
    42661 ttgctgcccc gattggtaat tatttagtgt tagccggggc gggttcgggc aaaactcggg
    42721 ttttaaccca tcgcattgcg tggctgattg gggtggaaaa tgtgccggaa tccaatattc
    42781 tggctgttac ctttaccaat aaagcggcgg cggaaatgcg acatcggatt gagtacactc
    42841 tttcccaatc gggcgataat cgattgttcg gaatgtgggt tggtactttc cacagcattg
    42901 ccaaccgctt acttcgttcc cactatttag atgcggattt accgcaagat ttccaaatta
    42961 tggataccga agatcagcaa cgtttactca aacgtttact gaaactgcat aatattgatg
    43021 agaaacattt tccgccaaaa cacgttgcgt ggtatatcaa cgcccaaaaa gataaaggca
    43081 aacgggcaaa agatattgat cactataacg atccgaatga aaaaaaattg gtggagattt
    43141 accaaatcta tcaagatgcc tgcgaccgag ccggtttgtt agattttgcc gagctgttga
    43201 ttcgggctta tgaactattc aaaaccaaat caaccatttt gcaacgttat caacaacgtt
    43261 ttcagcaaat tttgattgat gagtttcaag acaccaacaa tattcagtac gacttaattc
    43321 gtttgcttgc cggcgatgtc ggcaaagtga tgattgtcgg cgatgatgat cagtctattt
    43381 atggttggcg tggggcacag gttgagaata tccaacgttt cttaaatgat tatgacaacg
    43441 ctcaaaccat tcgcttagag caaaattacc gctctaccgg caacatttta agctgtgcca
    43501 atgaattaat tgccaataac gataaccgct taggcaaaaa tttatggaca gatagcggtg
    43561 atggcgagcc tgtggatatt tactgtgcct tcaacgaact tgatgaagct cgctttgttg
    43621 cctcgcaaat caagcaatgg aaagaagacg agggtgattt ggcggaatgt gcggtgttgt
    43681 atcgcagcaa cagccaatct cgtgtgattg aggaagcttt aattcaagcg aatattcctt
    43741 atcgcattta cggtggaatg cgattctttg aacgccaaga aattaaagat gctctggctt
    43801 atttacgctt aatcgccaat cgtcaagacg atgcggcgtt tgaacgggtg atcaacacgc
    43861 caaccagagg cattggcgat cgtaccttag acacactccg tcaaattacc cgtggtcgcc
    43921 aaattacgct gtggcaagca attcaagtgg cggtgcaaga agaacaactt tcagggcgtg
    43981 ccacttcttc cttattgcgt tttgtagagc tgattaatgc tcttgatcaa gaaaccgagc
    44041 agatgtcgct tgccgaacaa accgattttg tgattaaaaa atcgggttta tatgaaatgt
    44101 ataagcaaga aaaaggcgaa aagggcgaag ttcggattga aaacttagaa gagttagtta
    44161 ccgcaactaa gcagtttgtg aaacctgacg aagcggaaga gctgaccgat cttaccgcat
    44221 ttttaaccca cgcctcactt gaggctggag aagcccaagc ctcgcaacac gaagattatg
    44281 tcgaactgat gacgctacat tccgccaaag gattggagtt tccccgtgtg tttattgtgg
    44341 gcgtggaaga agggattttc ccaagcggaa tgagctttga tgaaggcagg ttgcaagaag
    44401 aacgccgttt ggcttatgtc ggcataaccc gagctaagaa aaaactgacg attagctatg
    44461 ccgaatcaag acggctttat ggtaaagaag aacgccacgt tccgtctcgc tttattgctg
    44521 aattacctga agagcatatt cgagaagtga gattgagagg ctcaattaac cgagcggcaa
    44581 gttttaacca agctaattca tttgcaaaaa atccgacaaa aacgaccgct tcctttttaa
    44641 acgatgatac ttggaaaatg gggcagaaag tgaaccacgc taaatttgga caaggcacga
    44701 ttattaatgt ggagggctca ggtgaagcca cccgtttgca agttgccttt gtcggcaacg
    44761 gcattaaatg gctgattgcc aaaatggcaa atttagagag gatttaggcg aataaaaagt
    44821 tttttgcagg aatatagatg gcgagatata ttgcccctta accttaaact aagggtaaat
    44881 aaaattaaat aatgcaagct agatataatg taaagtatca gaaataagat attaatttaa
    44941 gataaagaat ag
//
LOCUS       DANLXO010000007        42973 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.007, whole genome shotgun sequence.
ACCESSION   DANLXO010000007 DANLXO010000000
VERSION     DANLXO010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 42973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42973
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.007"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            32..751
                     /locus_tag="PXD69_000301"
                     /pseudo
     CDS             32..751
                     /locus_tag="PXD69_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            811..1260
                     /locus_tag="PXD69_000302"
     CDS             811..1260
                     /locus_tag="PXD69_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudoazurin"
                     /protein_id="HDL6282543.1"
                     /translation="MLAKLKWNQLACVTLAFCSASVFSAHHEIKMLDNNAEGSMVFEP
                     GYVKAEVGDTVTFIPSHKGHWVESRSIPEGAEKFLSKEDEEFTITLTHEGVYVYYCPP
                     HRTMNMAGIIQVGQALNLEATQKEVEKIEKRTKENKGRLFEYLEQVK"
     gene            1361..1882
                     /locus_tag="PXD69_000303"
     CDS             1361..1882
                     /locus_tag="PXD69_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type II secretory pathway, pseudopilin PulG"
                     /protein_id="HDL6282544.1"
                     /translation="MYKAITLIEILTTITIMVIAVYFISPVIFTLQDRIALHSEIENI
                     QSFIQQIQTKARYTKRNYTLTLSQRNNQWCMIAVIKPINTSKQIICDCLNKHFCDLGK
                     EYHLYTPTHQQIVLKNKSLYPKSFINVDGVSGQLESKCIKLSLNKENEILQFEQLGRV
                     YVAAKNKRSTCKD"
     gene            1914..2540
                     /locus_tag="PXD69_000304"
     CDS             1914..2540
                     /locus_tag="PXD69_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282545.1"
                     /translation="MASALGAFLLLLVASSYADFYYTQTKQKEQLYLQAEAHQLLNYF
                     QQHFQHIGYQGSHRTDSNFDLFQQAGKSLNIVHKNCIIGFYDLNQDGCLGKRKTKTAA
                     CKLGTVNNTREVLKEIVGFKVENNEIYTFSSQLDNCVKEQCQTLLENCDGNWSKFTEA
                     NNFKTKKLDFSWRQEDNLLKIELEIESPKQKGLIYTAVRYVFILNNTR"
     gene            2543..3226
                     /locus_tag="PXD69_000305"
     CDS             2543..3226
                     /locus_tag="PXD69_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2572 family protein"
                     /protein_id="HDL6282546.1"
                     /translation="MNKYKNASALLVSLILISTILSVLFLSKEKWLGQQNITHFYREK
                     YLSDQYNFLALYPQDKTQICQKFQKEQISQADLSDKQFRFLQYQFACQFHSLFKDKKP
                     TKEKYIHFTHLADYLDLSNVPNQEIYTIHSLAELPSSSEREPKIVLAKNAINENLPQE
                     FYGIVITDYLFDITGKKMYGTLYSSYDNAREERNLTFKKEVLAELEARYSAWRYLPYS
                     EHLMGAVDD"
     gene            3219..3512
                     /locus_tag="PXD69_000306"
     CDS             3219..3512
                     /locus_tag="PXD69_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5374 domain-containing protein"
                     /protein_id="HDL6282547.1"
                     /translation="MIKYKAETALSLLVAITLFAIVVLSFSQWQSAQNHRLNQHFQQQ
                     QAVMILENQLALKLAGLDCESSITQNQIRYQIQCSGNRLTIRFPLGKIELNND"
     gene            3561..6851
                     /gene="recC"
                     /locus_tag="PXD69_000307"
     CDS             3561..6851
                     /gene="recC"
                     /locus_tag="PXD69_000307"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HDL6282548.1"
                     /translation="MFTLYQSNQISSLAEMLVKIQQVNPLEDPFEPETILIQSQGMAQ
                     WLQMQIAELNGVMGNCDFLYPTTFLWQQYRLLFPELPKENIFERSSLVWRIMRLLPSC
                     LTLSEFAPLKRYLGDQPNKEQYQLKLYQLSAKIAELFDQYLVYRPHWLVSWEEGNLQA
                     IENEIKIATAAKPIDFDLIRADMKWQSHLWQQIVSDLQSESDEQVFTTSHRAYLQQNY
                     FAKLDDLTETEKAKLPKRIFIFGISSFSPLQLAVFKKLSEHCDIHLFFFNPSEKYWGD
                     SVEEKVWQKLALSHKISQDDLDNLLAEQRNKLLNLWGKQGRDFLAQLIEFEPNTMDVF
                     VEPEENSNLNKLKKQIFSLENDATITDLTADNSLQIHSCHSPMREVEVLHNQLLNLFE
                     QDSTLLPKDIIVMSPDINKYAPYIDAVFSRYNTGNRDPRYIPFSLSDQAFTQVDPIIH
                     SFLQLLAMKESPFNAEELFDLLEVNAIQTRFGFSTEDIHTLRVWVRNAGVRSGVEIEQ
                     PHWQNYNSWENGLNRLLLGSSLKEEQGIWENTLAFGDSYGLNAELVGRLASFIEALLA
                     WVNFLQTPQPLAAWQQAIKNLTADLYQENAENAASILLLNNVNDQIIEQISATHFSDD
                     LQIEVLALLFEQQLSQHSQQLNFLVGRVNFATLLPMRAIPFKVICLLGMNEADFPRQQ
                     QINSFDLMQYAPKKGDRAKRDDDRYLFLEALLSAQQMFYISYIGQSQKDGKEMLPSIL
                     VSQLLDAMNEALTPECKQQLSDEVEVLVRKQPLSVFSKKNFTHPRDHAYNAEWIIKPT
                     VAVQDFLSEPLTNESVASLELDELISFVQNPIRFFFLKVLGISFNTYDDTIDESEIFE
                     MSGLDNYRILNELLTINLAQQQRFFAEEQLKGNLPASYFAQIATQDLIGKITEMQAAL
                     SHYLASESRILSVNREVELERQTLTLNGNIANLYQNEVVLWRVGHLRDKDKIQTWIYH
                     LLLCAYFPEKTVKFYYREGEQVGVLSFETVSQIEALSQLSIYLNAYLDGLSQAQLVIY
                     DRIEEYLKGDGTNSEQVLIDLAEKDERDGSYLHRLLAQTKELDSQAIHQRTQSWFSLM
                     NQKIAKGD"
     gene            6987..9932
                     /gene="ptrA"
                     /locus_tag="PXD69_000308"
     CDS             6987..9932
                     /gene="ptrA"
                     /locus_tag="PXD69_000308"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HDL6282549.1"
                     /translation="MKLSFLTQFVAAAFALNVMTYPAFAEVAKNSEKTTASQPQSQLG
                     FELIKQSINKSPNDKAIYQGIKLDNGMEVLLISDSQANKSLMSAIIPIGSMDDPISQQ
                     GLAHYLEHMILMGSKNYPETNSLDGFLTKNGGMNNASTASHRTAYYLQVNNEAFSEAV
                     TRLADTLAFPLLLETNAKKEVNAVNAEMVRAKSHDGHLLHSVNLATANPAHPATKFAV
                     GNKETLSDKPDSKLQTELEQFYKQHYSANLFKVVLYSNQSIEQMAKLAANTLGKMENK
                     HFSIPQTAEPRYRDEDKSVFIQYKPVKSNKMLVIGFDFPNDEMQFKHKTGKYIAYMLN
                     NNTDGTLSDYLIKQGLSDGGIEAVSSANIGRDRGSFDIYIELTDKGLSEQDQIISLVF
                     QQIEKIKQEGIQESYFSEVKESLKQDFQHLQVEKNMDFVEFIADQMLHFPLEHVIDQP
                     YLTETMDNEAIKAKLAAMNIDNARIMLVSDTAKTDKKTPYFEAGYSVAKITQEQKQKW
                     LDFSKNPQLNLPELNPYFTTDFTLNKVETGLTKPKLINDQAGNLIYTMPSVYFTNEPK
                     AKIGVGFNIRPRKDDLKSLTAASILGYMNNLAQTKLDFQSSVAGMNLSLAPAANGLAL
                     SAEGYTQNLAKLMLDSVKQFSRFEFNEDVLAQAKQRLHQELDRNEKENSLNQANAALS
                     RFASYPYFDVPKQREMIDSITLADIEQLRQRILQQSSGFKLLSVGNLSAEQVSALAED
                     LQAVIKNQKSANATGQYVDVSTSQRKINVIKSVPNEDNALLMAFMPNGYNELESLTRA
                     KLLRSIISRWYFDDLRTDKQLGYVVYATDNIIGKTAGIQFMVQSPNTTPAGILEHNER
                     FFTQSFERLKNLSDEEFGKYRDSLVEKLQYKPESLAEEFSEFGSDFSRNNPKFDRLQQ
                     VIELTKALTKADIVAFYQKAVIEKQGFVFVSQAVGTKTKAEDVAKFDGFEQIESIEKL
                     QREFEIKDY"
     gene            complement(9981..11627)
                     /locus_tag="PXD69_000309"
     CDS             complement(9981..11627)
                     /locus_tag="PXD69_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6282550.1"
                     /translation="MKFPTLTKISASVLAVLALAACDDKSNENKPTAAAAKPQTEKTF
                     VNCVSRSPTGFSPILMMDGLSYNASSQQIYNRLVEFVPGTTDIEPALAESWEISEDGL
                     TYTFKLRKGVKFHSNKDFTPSRELNADDVVFSFNRQLDKNHPYHTVSNGTYPYFNAMK
                     FPTLLKSVEKVDDSTVRITLTKRDASFLSSLGMDFTSIYSAEYADKMMKAGIPEAVDT
                     TPIGTGPFVFSGYVLDQASRYVANKEYWKGKPDIDRLIFEIVPDATTRYAKLQSGQCD
                     LMDFPNATDIEKMKNDPKINLLSQPGLNIAYVAFNTEKAPFDNVKVRQALNLAVDKKA
                     IIDVVYQGNGFAAKNPLPPTIWGYNDSLADSEYNVEKAKQLLAEAGFPNGFETELWVQ
                     PVVRASNPNPRRMSEIIQADWEKIGVKAKLVTYEWGDYIKRTKAGELTAGTYGWSGDN
                     GDPDNFLSPLFGTPNIGNSNYARFTNPELDALLEKALGSSDKAERTKLYEQAQVILRE
                     QAPWINVAHSINFAPTSKRVEGYKQSPFGYTYLYPVKIVD"
     gene            11703..13793
                     /locus_tag="PXD69_000310"
     CDS             11703..13793
                     /locus_tag="PXD69_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL6282551.1"
                     /translation="MIFANQSIELDTVNVIATRDPSKFADTPQKQTKDALLVKQATSV
                     AAALKALPNVDVQGGARAIVQKPSIRGLSDNRIVQVIDGVRQNFDLAHRGSYFVPMSL
                     IQEIEVIKGPSSSLWGSGALGGVVAMRTPNALDLLKNNDKFGAKIRQGYQTANNLSET
                     EASVFAANDRFDALLSGFYNNADNLRSGEGKELNNTGYKQAGGLVKFGWQINDTHRLE
                     LSHRHSQFKQTAPGNNEVENQFTDNDVSAQISAWHAANPGNPSNPVYLAKMLAFYGQL
                     HSSLGSVSYLSDQKITDKSTSLNYYFNPSNPYLSTQVTLYSNSTTENEHRKISGVEDQ
                     TKLSTRGVNIRNHSELSWFSLVYGVDYMLDKVATQRGRNNTDAQYRANPYDAKSKTTG
                     AYLIAHIPLFDEKVVFSPSVRYDRFDTSSETVKYKDSHWSPAAKLTWKATNWLDLTAK
                     YNEAFRAPSMQERFVSGSHFGTTVRGLPINNIFLTNPNLRPETAKNKEVTFNVHFDNV
                     ISQGDKFNFEATYFRNDVKDLINLQVFKANPTSPMEFIPTRSQYQNIANARLSGIELQ
                     TRYQTERLAVFANYGSTKGKDKDSGEALSNIAASKIGFGVNYAVVQDKFTVGANVTRY
                     QAQHRVPKNHGVTYQGYTLTDLHATYAPLKGEWKNLRLDVAVENLFDKKYQPAFSLME
                     GSGRNVKLSAAYSF"
     gene            13864..15552
                     /locus_tag="PXD69_000311"
     CDS             13864..15552
                     /locus_tag="PXD69_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL6282552.1"
                     /translation="MKFYPSLIASAVSFAVVLSGQAAVNVPDAGSLQRELDQRQAQQK
                     VKPSGEWFNQAAKAPYTATDGQELTFPLTQVQVFDRTNQEISTPELAPILANYVGKAV
                     SLTDLSNLANEITEFYRSHNYLVAKAILPPQEIEQGKVKILLFKGNVGEVRLQNQSAL
                     SDKFVARLANTTVNGSEFILKDELEKFALTMNDVPGVNTGLELSAGKQAGEANLLIKL
                     QNAERFSGYVSADNQGNKNTGRYRLATGIKANNLIGWGDELKVDLMSSNNANLKNARL
                     DYSSLIDGYATRLGLTANYLDYELGGNFKALQSQGHTHNLGAYVLHPTIRLPDFRLNT
                     KVSFNHQRLTDKQQAVNVAQKRQVNSLTVGINGSWNSLKDGTSYFSLSALFGNLANHT
                     NEQAHYVATDFQPKSRFTVYQYSLSHEQALPKSFAFNLGVNGQFADKTLDSSQKMLLG
                     GLYGVRGHQAGVASVDEGHLVQTELKHYLPLFSKSLLTSSVFYDYGWGKYYKHSGFLA
                     RGVNNSVKLQSIGAGLSLSEAGSYAINASVAKPLGKKIENADKHQFWFSAIKTF"
     gene            15564..18380
                     /locus_tag="PXD69_000312"
     CDS             15564..18380
                     /locus_tag="PXD69_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDL6282553.1"
                     /translation="MFKRNAISLCILTACSGLAYANTADLPQGERVRVGTATIERTTD
                     KMTVNQSSNKVQIDWNSFDIGKNKEVEFKQPTEMAVAYNRVTGGNASQIQGKLTANGK
                     VYLANPNGVLITKDAEVNVGGLLVTTKDLEKISENGTKDKFSRKLAKEGKILNQGKIT
                     AKGERAFVVLVGDDVANEGEINAKNYYHKETKKVTECYDDSWSLVKQCYDFDKEIVKS
                     TSGEVHLSSGENVTFTLSDRYIDVALDDNTVNSIIKNDGAIIANGDITLTAKGRNQAL
                     DSLIINNGVLQANKVQNKNGTIILSAGETQLHEKSQIKGEKVSFAEASYYGPTEDIKV
                     VSKTGSKVTAPVIDFKGKTVNIQGEFGREDSTDLYNDELQILKTTVNIEVPNTEDIRI
                     ADTDNGGSGSFIQAGALASLLANNGRVNVQGKGFDVSGKLNVNAFKQTDSVLKFINQA
                     GINIHNADIHANGRLFFVTNLPNDTDFQSNIRITDSKINLGNGSMGFGRSSKRWEMHD
                     VVRRADTELRKKFNLDMKNVELNQVDDFVVAGGFQQVNLDNVKARGKTNFYLDSGNSR
                     MFVGEQIYEYGVTDIEKRTQLANLDQRRKRWNSDNYDETDLNWEYNQRFDGFAAKHNH
                     RAPIADTEINIANSDISLDNGFVHLMAEKINLDDSKINITFNQDNSLDESTQINRLGL
                     NGKVSMKNSHINVVGDEKDGISPARHYATMFLVGELLGEKSSIFLKSHQGAVLRTDSN
                     VTIAGKNSKDDLKITAITTGKKMGNEIIGPDGLPTSEDNDANASNTAFAIGYEPNATA
                     IVENASITALAPNGGLAYTGTSKTQIDAKDNATFTFFEKPRAGYDKLLGDIKGNPDKL
                     TPRDFARLYDNIKGIKASSLSEQQLGLADTAKKTSEHTLANSLDVENLVSVTVCDEQN
                     KCEERMLGNKNTNAKVIVGDIKFE"
     gene            18503..18634
                     /locus_tag="PXD69_000313"
                     /pseudo
     CDS             18503..18634
                     /locus_tag="PXD69_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(18689..19450)
                     /locus_tag="PXD69_000314"
     CDS             complement(18689..19450)
                     /locus_tag="PXD69_000314"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDL6282554.1"
                     /translation="MKLNQAQIQNALICGQAVVFDEIDSTNEYLLTHHQRLENGTVCL
                     AEKQTAGRGRRGRTWYSPESENLYFSILWHYPMEQAADLPPLSLVVALIIAESLTVQN
                     VKDIQIKWPNDIYYQGKKMGGILLETQANRNGLDVVIGIGLNLGMAKVDENIVTQAWA
                     DLSQYHFNRNELVCRLAYELQKNLKIYPLVGFAHYAERWQSFDLFRHKAVKLITEAEE
                     IHGISQGINEQGELILKQGDNLRYFGIGEISLRAD"
     gene            complement(19462..20493)
                     /gene="murB"
                     /locus_tag="PXD69_000315"
     CDS             complement(19462..20493)
                     /gene="murB"
                     /locus_tag="PXD69_000315"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDL6282555.1"
                     /translation="MMKHSLTPFHTFHLPAKATQIIEFTTVEQLLSEWQKAFNAQLPI
                     LILGQGSNVLFLEDFDGVVLVNKLKGITHHEDEHFHYLHVQGGENWHELVKWTLAHNI
                     AGIENLALIPGVASSAPIQNIGAYGVEFEQVCDFVEVLNLRSGELFKLSKSECEFGYR
                     ESVFKHQYRDEFAIISVGLKLAKAWKPVLSYGSLAQLNPETVTPIQIFDEVCAVRSSK
                     LPNPDEFGNAGSFFKNPVISNEQFAPIQAKFPAIPHYPQADGTVKLAAGWLIDQTGLK
                     DLQIGGAAVHTQQALVLINKENATGQDVLALAKTVRQRVKEKFGVEIQPEVRFIGKNG
                     EVDSEKITR"
     gene            complement(20597..21271)
                     /gene="crp"
                     /locus_tag="PXD69_000316"
     CDS             complement(20597..21271)
                     /gene="crp"
                     /locus_tag="PXD69_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010787261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HDL6282556.1"
                     /translation="MQDMTLSTAPLENVTPPPSIHDPAVEWFLTHCHIHRYPAKYTLI
                     HAGEDAESLFYIVNGSVSVYIKDDETKEMLLTNLGTGEFVGELSLFEEKVQQRTAYVR
                     TKGPCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRQTSRQVGNLAFLDVAGRIAQ
                     TLLNLAKMPDAMTHPEGMQIKITRQEIGQMVGCSRETVGRIIKMLEDEGLISAHGKTI
                     VVYGAR"
     gene            complement(21333..21551)
                     /locus_tag="PXD69_000317"
     CDS             complement(21333..21551)
                     /locus_tag="PXD69_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HDL6282557.1"
                     /translation="MIIPWQELEESTLHNILDSFILREGTDYGERELSLAEKRERLLT
                     QLKADKVVIVWSELHESLDIKDKKSFLG"
     gene            complement(21554..22159)
                     /gene="slmA"
                     /locus_tag="PXD69_000318"
     CDS             complement(21554..22159)
                     /gene="slmA"
                     /locus_tag="PXD69_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HDL6282558.1"
                     /translation="MTEPKIKMPKKSVVERRQQVLEVLISLLNSEEGMQRITTERLAA
                     AVGVSEGALYRYFPSKTKMFEALIEKIEQTLTSYIHANKRQDSSANSVRAILYVILEF
                     ARKNPGVTRILTGHALMFEEELLKARVAKFFDNLELQFANILQLSKLRERKSFEDERA
                     LAGYLVNFCEGQFLRLVRSNFSYNQHQHFEKQWAFIKPLFD"
     gene            complement(22171..22626)
                     /gene="dut"
                     /locus_tag="PXD69_000319"
     CDS             complement(22171..22626)
                     /gene="dut"
                     /locus_tag="PXD69_000319"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDL6282559.1"
                     /translation="MKQIDLKILDSRIGNEFPLPAYATEGSAGLDLRAMLNEPLTVKA
                     GETVLIPTGISIYIADPNLAAVILPRSGLGHKNGIVLGNLVGLIDSDYQGELKVSLWN
                     RSQADFTVNVGDRIAQLVFVPVVQASFNIVQEFEQTDRGEGGFGHSGKQ"
     gene            complement(22660..23499)
                     /locus_tag="PXD69_000320"
     CDS             complement(22660..23499)
                     /locus_tag="PXD69_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL6282560.1"
                     /translation="MKKYNIVFSADKNYLPYLEIALKSLLAHHNHLSIFILSTGDISH
                     HWIETLRPYLENRYSTLRLGYLDSNNLANFNSNGYITNSTYLRYYIEELFEHSDSPYW
                     IYLDCDLVVNGNITDPFTNLDFSFGSIAAIADPYVNKLKNHPYIYKNYFNAGVFYLNA
                     KHFSKQPFIQLTERFKENLPFGDQDILNYCFQYNWIELDRKYNYQTEHLLDDIAQQKI
                     SPNYIPHIIHFTGGIKPLEGKFNSSYVENVASLFRFYHNTSWEILTELPLGTIQLKPF
                     ITE"
     gene            complement(23486..23668)
                     /locus_tag="PXD69_000321"
     CDS             complement(23486..23668)
                     /locus_tag="PXD69_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL6282561.1"
                     /translation="MKIMQLTSNQYINDIKHILLSARQKAYQAVNSAMVEAYWKIGER
                     IVQEEKNMVKDQNEKV"
     gene            complement(23665..23982)
                     /locus_tag="PXD69_000322"
     CDS             complement(23665..23982)
                     /locus_tag="PXD69_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282562.1"
                     /translation="MKLLVSHFHQGEGKFPTFSAGTAVRLGSECVNYPNWFACEIDGW
                     KTFVPSHFISEDKLICDYNPTELVAAQGERVEFLELHYQWAIVKRENEIGWLPCEILR
                     VIG"
     gene            complement(23982..25184)
                     /gene="coaBC"
                     /locus_tag="PXD69_000323"
     CDS             complement(23982..25184)
                     /gene="coaBC"
                     /locus_tag="PXD69_000323"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDL6282563.1"
                     /translation="MLQNKKILVGISGGIAAYKTIEFIRHLKKANAEVRVVLTPAAEA
                     FVTPLTLQAISGNAVSTSLLDPQAELAMGHIELAKWADLIVIAPASADFIARLRMGMG
                     NDLLSTLCLATASPILLAPAMNQQMYKQIAVQENLSVLVNRGVQLIGPNSGFQACGDV
                     GAGRMSEPEEIYQAVLAHFSNNQDLEGLNVTITAGPTREAIDPVRYISNHSSGKMGYA
                     IANAFAERGAKVTLISGPVNLPTPKNVERINVESAVEMEQQAVKFAQKSAIFIGCAAV
                     ADYRMAAVSDQKIKKTDANDELTLKLVKNPDIIANVANLAENRPFVVGFAAETQNVAE
                     YAKSKLERKNLDMICANDVSGGQVFGQDQNALHLFWKNGEKTLPLADKSKLAESLVQE
                     IVKHYREK"
     gene            25334..26071
                     /gene="radC"
                     /locus_tag="PXD69_000324"
     CDS             25334..26071
                     /gene="radC"
                     /locus_tag="PXD69_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDL6282564.1"
                     /translation="MEEKMNDFFDEDSQEPTMMPREKLLTQGAASLTDSELLAIFLRT
                     GTKAVPVLALAESVLMAFGSLRQLLNANIDDFCKIYGLGKTKYIQLQASKEMTKRYLA
                     QQMEFSEMIQAPYMAIMYFQTELEEEEREVFMVLFLDNQNRLIYKEKMFFGTINQTAV
                     HPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDRSLTKKIEMACELVDIRFVDHIIV
                     GKGDYFSFEEEKLEMKEHSFLQISDRK"
     gene            26303..26539
                     /gene="rpmB"
                     /locus_tag="PXD69_000325"
     CDS             26303..26539
                     /gene="rpmB"
                     /locus_tag="PXD69_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDL6282565.1"
                     /translation="MSRVCQVTGKRPAVGNNRSHAMNATKRRFLPNLHTHRFWVESEN
                     RFVTLRLTAKGMRIIDKKGIDAVLAEIRARGEKI"
     gene            26551..26721
                     /gene="rpmG"
                     /locus_tag="PXD69_000326"
     CDS             26551..26721
                     /gene="rpmG"
                     /locus_tag="PXD69_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDL6282566.1"
                     /translation="MAAKGAREKIRLVSTAETGHFYTTDKNKRNMPEKMEIKKFDPVV
                     RKHVIYKEAKIK"
     gene            complement(26802..27557)
                     /locus_tag="PXD69_000327"
     CDS             complement(26802..27557)
                     /locus_tag="PXD69_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL6282567.1"
                     /translation="MSKNRLEQILLFLKNHNIATVEQLVKVTEASPATIRRDLIKLDE
                     EGVVIRTHGGVSLNQFIPFQPTTNEKQFKQIVEKERIAEYAVSLISPGNSILLDAGTT
                     TLCIAKKIAHMPLRVITTDLHIALLLSEYKQIELIITGGRVDNSSQSCIGNHSLTLLE
                     NINPDIAFVSCNSWSLEKGVTAPTEEKANLKRMLQQNAKQKVLVADSSKYGKYSLFRA
                     TQLDNFTQIITDKGLPIEYSQALSSNDFKLSLV"
     gene            complement(27665..28891)
                     /locus_tag="PXD69_000328"
     CDS             complement(27665..28891)
                     /locus_tag="PXD69_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL6282568.1"
                     /translation="MKETLLVIADDLTGANDTAVMFAESGFDTVLKTKVSALAQIHPD
                     KAQVISVSTDSRAIGEKAKELTQIAISNAIQNSIGQIYLKIDSTMRGSVKYQIEGAIK
                     AWAGLYPDVKAIICPAYPEMGRTIEAGHLYVNGVPVNETASGKDPICPVHSSSMQKLL
                     PDAQVIPCDTVDNLQASIENSEYKQIVIDAKTHEDLSMIAQVINHIGNKIIPVGSAGL
                     AQKLKNIQNQQQPERNLKLGRALIVVTSIHETSQLQVDEYISTLGGKSIVFNPSPSQL
                     INYSQSEHSLKLQLNALIRFSRDHVIIRANPAKVVNAKSANITETSKEISQHLADLSK
                     FCLDNEKFDSLILFGGDGAAALLDQMNVTEMNVQYAVVPGVPLCSIEKGNYSGITVMT
                     KSGGFGNNTLLSNIMN"
     gene            complement(28888..29886)
                     /locus_tag="PXD69_000329"
     CDS             complement(28888..29886)
                     /locus_tag="PXD69_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease"
                     /protein_id="HDL6282569.1"
                     /translation="MSTQTSKSIVPIYDGMNKIPGGAMVIPLILGSIIGTFFPEFLNL
                     GSFTTALFKSSAGPLIALLIFATGMQITVRSSGPVLAHTGVVLLFKTIIPALLVVILG
                     LWVGNDGVMGVSLLAMLTVVANSNGGIWLAFTGKYGDYRDKGAYVASAVNDGPFFVLL
                     FLGVSGLADIPLSLMLAAVIPLIIGMVIGNLDPKWTELMKPTGAIVIPFFAFALGTGI
                     NLQSIITGGATGIILGIVASLFTGFLVFIGYKTILRRGNQSGIGFAAGTTAGNAIITP
                     EIVAQADPTLAPFVQTATAQIAAAVLVSAILAPLFAAWVLKRQGGLEQDTIKGENL"
     gene            complement(29897..30898)
                     /gene="pdxA"
                     /locus_tag="PXD69_000330"
     CDS             complement(29897..30898)
                     /gene="pdxA"
                     /locus_tag="PXD69_000330"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HDL6282570.1"
                     /translation="MKPILGITMGDAAGIGPEVIIKALANQRIYELAHPVVIGDRKII
                     QRALPIVHSELKLRILNNLDNFVAEYGVIDILDLNNLPEDLPFAQVDPRAGKAAYEYI
                     EEAVNLAMGGKIHAIVTAPLNKEALHAGGKPFPGHTEILATLSNTKDYSMMLTSEKLN
                     VIHVTTHVQLRKACDLITKERVATVIDLAEENARILGFKEPRIAVAGLNPHSGENGMF
                     GDEDQKEIVPAIQEAQAKGFNVTGPVPPDTLFHRAANLNEFDIVVVMYHDQGHIPIKL
                     LGFDTGVNVTVGLPFIRTSVDHGTAFPIAGKGTADSRSMTEALYLGAKMANIKYATH"
     gene            31332..32696
                     /locus_tag="PXD69_000331"
     CDS             31332..32696
                     /locus_tag="PXD69_000331"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005820549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HDL6282571.1"
                     /translation="MTIKTPIQAVLASNQYFLDRQDAMESNVRSYPRKLPFAYQKAQG
                     VWVTDVEGNEYLDFLAGAGTLALGHNHPKLIQAVKDVLDSGLPLHSLDITTPLKDAFT
                     EELLSFFPKDKYILQFTGPSGADANEAAIKLAKTYTGRGNVIAFSGGFHGMTHGALSL
                     TGNLSAKNAVQGLMPGVQFMPYPHEYRCPFGIGGEAGAKAVEHYFENFIEDVESGVVK
                     PAAVILEAIQGEGGVVPAPISFLQKVREVTQKHGILMIVDEVQAGFCRSGKMFAFEHA
                     GIEPDIVVMSKAIGGSLPLAVLAIKKEFDAWQPAGHTGTFRGNQLAMATGYVSLKIMR
                     EENLAKNAQERGEYLTNALRELSKELPCIGNVRGKGLMMGIDIVDERQPKDATGAYPR
                     DCDLAVAIQKYCFKNKLLLERGGRGGNVVRVLCAVNITQAECEEFIKRFKQSVAEAVK
                     AVRG"
     gene            32786..34321
                     /gene="ddc"
                     /locus_tag="PXD69_000332"
     CDS             32786..34321
                     /gene="ddc"
                     /locus_tag="PXD69_000332"
                     /EC_number="4.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,4-diaminobutyrate decarboxylase"
                     /protein_id="HDL6282572.1"
                     /translation="MSNLEKHRQSLFCSDPKSIADYESAMNNAVKAVSDWLKEEKMYT
                     GGSIKELRAKINGFNPTQAGVGVQKSLEHLVEIFLKPSLKVHHPHSLAHLHCPTMVTS
                     QIAEVLINATNQSMDSWDQSPAGSIMEEHLIDWLRQKVGYGKGTSGVFTSGGTQSNLM
                     GVLLARDWAIANHWKKADGSEWSVQADGIPADAMQKVKVVCSENAHFSVQKNMAMMGM
                     GFQSVVTVPSNANAQMDVEALAKTLADLKAEGKIVACIVATAGTTDAGAIDDLKAIRK
                     LADEHQAWVHVDAAWGGALLLSKDFRHFLDGIELTDSITLDFHKHFFQSISCGAFLLK
                     DEANYRFIDYKADYLNSEYDEEHGVPNLVSKSLQTTRRFDALKLWFTVEALGEELYAS
                     MIDHGVYLSKEVEAYINATDGLEMLVPAQFASVLFRVVPQGYPAEFVDTLNQNVADEL
                     FARGEANIGVTKVGEHQSLKMTTLSPIATLENVRALLAQVLAEADRIKDSIVNGTYVP
                     PID"
     gene            34424..34786
                     /locus_tag="PXD69_000333"
     CDS             34424..34786
                     /locus_tag="PXD69_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirD/YgiW/YdeI family stress tolerance protein"
                     /protein_id="HDL6282573.1"
                     /translation="MKKVLGLTLMAMALSACNSTASNGSSQANTGVAPANVISVKQVL
                     AAADDSYVTVEGTLLNKVGDETYLFKDATGQIRVEIDDEVWAGQHVGSEGNKVRLYGE
                     IDKGFNKTELDVKTLTVL"
     gene            complement(34876..35463)
                     /locus_tag="PXD69_000334"
     CDS             complement(34876..35463)
                     /locus_tag="PXD69_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6282574.1"
                     /translation="MNHLIIYAHPNPSSFNHAILEKTIAASVPNKVVVRDLYQLNFKP
                     ILDWAEFQGTLSKHYEADVAIEHQYWLEADVITLIYPLWWMGFPAILKGYLDRVLSYD
                     FAYRNGEIESIGLLTGKKMQQFVTLGNSNEKYERKGFLAAFEHTLGKGLFEFCGIRDV
                     KMHYFGNIGLKETDYTAILQQITASCSTILKEQAV"
     gene            35639..36187
                     /gene="napF"
                     /locus_tag="PXD69_000335"
     CDS             35639..36187
                     /gene="napF"
                     /locus_tag="PXD69_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HDL6282575.1"
                     /translation="MTDYPNQSLPRRSFLRGQFLDSLKSQKVSQQGYEPIRPPWANLA
                     NFLEKCTACGNCIQACETQIIVKGAAGYPEIDFSRGECTFCEKCVHSCEAEVFRAVSE
                     QPWSHKIEIQAGCLLKLGTECRSCGDSCEMRVIRFRPSLGGIAEMVLNLESCNGCGAC
                     LSVCPTSAIKIQPLQTQANRDE"
     gene            36180..36446
                     /locus_tag="PXD69_000336"
     CDS             36180..36446
                     /locus_tag="PXD69_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDL6282576.1"
                     /translation="MSEKLSEQENWYVCSLVVQAKPEKLEEVKAEILKIPHTEIHGEK
                     TDEGKLVVTIESNVHLALSDRIDQVRDIKGVIVVSLISNYIDEQ"
     gene            36485..38983
                     /gene="napA"
                     /locus_tag="PXD69_000337"
     CDS             36485..38983
                     /gene="napA"
                     /locus_tag="PXD69_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase catalytic subunit NapA"
                     /protein_id="HDL6282577.1"
                     /translation="MELNRRDFMKANAAVAAAAAAGIMIPVKNVQADDTGIRWDKAPC
                     RYCGTGCSVLVGTKDGKVVATQGDPDAEVNRGLNCIKGYFLSKMMYGADRMQEPMLRM
                     KDGKFDKNGDFTPVSWDQAFSIMAEKIKTTIKNDGPNAVGMFSSGQTTIFEGYAKVKL
                     WKGGFRSNTIDPNARHCMASAAVAFMRTFGMDEPMGCYNDIEKTDAFVLWGSNMAEMH
                     PILWSRISDRRLSDNKVKVVVMSTYEHRSFELADTPIIFKPHSDLAILNYIANYIIQN
                     DKVNWDFVNKHTKFKRGETNIGYGLRPEHKLQQNTNAKTAGKMYDSDFEEFKKIVAPY
                     TLEEAHRISGVPKDQLETLAKLYADPNQKLVSFWTMGFNQHTRGVWVNHMMYNVHLLT
                     GKIALEGCGPFSLTGQPSACGTAREVGTFIHRLPADMVVTNPKHREIVENSWKLPAGA
                     IPDVPGFHATAQSRALKDGKMKFLWQMCTNNMQGGPNINEEIFPGWRNPETFIVVSDP
                     YPSVSAVAADLILPTCMWVEKEGAYGNAERRTQFWRQQVKGPANARSDTWQLVEFSKY
                     FKVEEVWPEELLAKAPELRGKTLYEILYRNGKVDSYQVPTNIPGYMNDEADHFGYYIQ
                     KGLFEEYAEFGRGHGHDLADFDTYHKVRGLRWPVVKDEKTGEYKETLWRYREGYDPYV
                     KAGEEVAFYGNADKKAVILGVPYEPPAEAPDEEYDLWFCTGRVLEHWHTGTMTRRVPE
                     LHKAFPTNLVWMHPNDAKKRGLRHGDKVKVISRRGEYVSNLDTRGRNKCPEGLIYSTF
                     FDAGQLINKVTLDATDPISFETDFKKCAVKVVKA"
     gene            39072..39977
                     /gene="napG"
                     /locus_tag="PXD69_000338"
     CDS             39072..39977
                     /gene="napG"
                     /locus_tag="PXD69_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDL6282578.1"
                     /translation="MKMDPNRRQFLKNATRTAAGVCGVGMILGLQQQQSFARQGVALR
                     PPGALPEQDFLSACTRCGQCVQACPYDMLHLASLISPVEAGTPYFIARDKPCEMCLDI
                     PCMNACPTGALSEELKDIDDARMGLAVLLDHETCLNWQGLRCDVCYRVCPLIDKAITL
                     EKVHNDRTSIHAKLIPTVHSDACTGCGKCEQACVLEEAAIKVLPMDLAKGLLGRHYRL
                     GWQEKQNAGKSLIEDVHPEGLRPAYDARMPEGLHEPVYQHMEVKPDVKVATPSRATQN
                     YVPNSTTVEAPEHFPDLDLNLKGVK"
     gene            39977..40855
                     /gene="napH"
                     /locus_tag="PXD69_000339"
     CDS             39977..40855
                     /gene="napH"
                     /locus_tag="PXD69_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDL6282579.1"
                     /translation="MAANSPKNAGLEARQKLGWWHAYRFLILRRLSQLSIILMFLSGP
                     LWNVWILKGNYSGSLLLDTVPMTDPLMTAEVLATGYRPEWTVLVGALIMVAFYGIVGS
                     KLFCSWVCPMNMVTDTAAWLRRKLGIRQTAKIPRNLRYVILAVILVGSAISGTLLWEW
                     INPVAALGRVFVFGLGATLWLVLVVFLFDLLVAEHGWCGHLCPIGATYALIGAKSLIK
                     VKVVDRNRCDNCMDCYNVCPEPQVLRVPLHGKPEESTVILSKDCITCGRCIDVCAENV
                     FAFGMRFQGSIDVKNI"
     gene            40901..41329
                     /locus_tag="PXD69_000340"
     CDS             40901..41329
                     /locus_tag="PXD69_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDL6282580.1"
                     /translation="MRKYLAFILAVMSGFAMAEAPKLSGSIDETTESVAPGFHNPQKD
                     VGTIPTTFPFQPPLVPHSIRGLQVSKNVNHCLGCHAIEPSKTTGATRLPPSHFTDRDG
                     KVYENESPRRYFCLQCHVQQTDVNPIIQNKFESVRESQAK"
     gene            41340..41948
                     /locus_tag="PXD69_000341"
     CDS             41340..41948
                     /locus_tag="PXD69_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL6282581.1"
                     /translation="MLRRFCNWLRSPSKMAIGAVILISALGGIFAWSGFNAGLAMTNT
                     EEFCSDCHMNDVVPEYRASAHYSNRSGVKAICSDCHVPHEFFPKWQRKIIAAKEVYAH
                     FTGKVDTKEKFEAHRGEMAEREWARMKANSSQECRNCHNFDDMDFTQQKNIAQQMHAL
                     AQEQGKTCIDCHKGIAHNLPHMEAIQKNFIPDDLLKKAEEKK"
     gene            complement(42010..42829)
                     /gene="cpdA"
                     /locus_tag="PXD69_000342"
                     /pseudo
     CDS             complement(42010..42829)
                     /gene="cpdA"
                     /locus_tag="PXD69_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253466.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
BASE COUNT        12963 a         8542 c         9214 g        12254 t
ORIGIN      
        1 gttttagtcg ttatctagga cagcccctac ttttaatact cgtaagcccc cttttgataa
       61 ccctaaagtt cgtcaagcat tgaattatgc ggtgaataaa actgaaattt taacttccgt
      121 ttaccaaggc tctgcaacgc cagctaaaaa cccaatgcct tctacgattt ggggatataa
      181 caacgaagta gccggttatg aatttaatcc ggaaaaggcg aagagcttgc ttaaagaggc
      241 cggattagaa aatggctttg aaacagaaat ttgggcaatg cctgtttctc gcccttacaa
      301 tccaaatgcc cgtagaatgg ctgaaatgat tcaagaggat tggaaagcaa taggggtaga
      361 ggcaaagata gtgagctatg aatggggaga atatcttaaa cgaatgggaa acggcgagca
      421 cgctaccgga atgattggtt ggaccggaga taacggcgat ccagataatt tcctcaatgc
      481 cctactcagt tgtaatgcgg tagaacaagg ctcaaactat gcagggtttt gtaatccaga
      541 gtttgaccgt ttaattaatg aggctgcgac tatcagtgat caaaacaagc ggtcagattt
      601 atataaaaaa gcgcaattca tctttaatga gcaagcacct tggttaccga ttgcacattc
      661 aacggtgtat tttccggtaa ggaaagaggt aaaaggctat gttgtcagcc cgtttattgc
      721 tcataatttt tatggtgttg agctggaata acctaaggta taatgaattg aactcatttt
      781 gtgcctcata aatttaggag caataaatat atgttagcga aacttaagtg gaatcaatta
      841 gcttgtgtaa cattggcatt ttgttcagcc tcagtatttt cagcccatca cgaaatcaaa
      901 atgttagata acaatgcgga aggatcaatg gtatttgagc ccggttatgt aaaagcagag
      961 gtgggcgata cggtaacatt tattccgtct cataaagggc attgggttga aagccgctcg
     1021 attccggaag gtgcggagaa gttcttatct aaagaagatg aggaatttac tattaccctt
     1081 actcacgaag gtgtttatgt ttactactgt ccgccacacc gaaccatgaa tatggccgga
     1141 attatccaag taggacaagc tctcaatctt gaggccacac aaaaagaagt ggaaaaaatt
     1201 gaaaaacgca cgaaagaaaa taaaggacgt ttatttgaat atttagagca agttaagtag
     1261 aagtgattta attttgcgat ctgcatcgaa aaatcaatat ttaatagttt acaaatgatg
     1321 cttaaattct aagataccct ctatcaatga gggtattttt atgtataaag ccatcacatt
     1381 aattgaaata ctaaccacta tcactattat ggtgatcgct gtttatttta tctcgccggt
     1441 tatttttaca ctgcaagatc gaattgcact tcatagtgaa attgaaaata tccaatcttt
     1501 tattcagcaa atccaaacta aagcacgtta taccaaacgt aattatacct taaccctttc
     1561 tcagcggaat aatcagtggt gtatgattgc ggtaattaag ccaatcaata ctagcaaaca
     1621 aattatttgt gattgtttga ataaacattt ttgtgattta ggaaaagaat atcatcttta
     1681 tacgccgact catcagcaga ttgtattaaa aaataaaagt ttatatccga aatcctttat
     1741 taatgttgat ggggtaagtg gtcaattaga atcaaaatgt attaagctca gtttaaataa
     1801 agaaaatgaa attttgcaat ttgaacaatt aggacgggtt tatgtggcag caaaaaataa
     1861 acgtagcacc tgcaaagatt agtttatctg cttttagcct aattgaagta ttaatggcta
     1921 gtgcattagg ggcgttttta ttattgcttg ttgcttcaag ttatgccgat ttctattaca
     1981 cacaaaccaa acaaaaagaa cagctctact tgcaagcaga agctcaccag ttactaaact
     2041 acttccaaca gcattttcaa cacattggct atcaaggctc tcacagaaca gacagtaatt
     2101 ttgatttatt tcagcaagca gggaaaagcc tgaatattgt gcataaaaat tgcattattg
     2161 gattttacga tttaaaccaa gatggctgtt tgggaaaacg taagacaaaa acggccgctt
     2221 gtaagttagg aacagtgaat aataccagag aggtgttaaa agaaattgtt ggctttaaag
     2281 tagaaaataa tgaaatttat actttttcat cgcaattaga taattgtgtg aaagaacaat
     2341 gccaaacatt attggaaaat tgcgatggaa attggagtaa atttaccgaa gcaaataatt
     2401 tcaaaactaa gaaactggat tttagttgga gacaggaaga taacttatta aaaattgagt
     2461 tagaaataga atcacctaaa caaaaaggat tgatttatac ggcagtacgt tatgttttta
     2521 tcttaaataa tacgaggtaa aagtgaataa atataaaaat gccagtgcat tattggtttc
     2581 attaatactt atttctacaa ttttgtcggt tttattttta agtaaagaaa aatggcttgg
     2641 acaacaaaac attacccatt tttatagaga gaaatacctt tccgatcaat ataatttttt
     2701 agcgttatat ccacaagata aaacgcaaat atgccaaaaa tttcaaaaag agcagatcag
     2761 ccaagcggat ttatccgata aacaattcag gtttttacag tatcaatttg cctgccaatt
     2821 ccatagttta tttaaagata aaaaaccgac taaagagaaa tatattcact ttacccattt
     2881 ggcggattat ttagatttat caaatgtgcc aaaccaagag atttatacta ttcattcttt
     2941 agctgaatta cctagtagca gtgaacgtga gcctaaaatt gtgcttgcta aaaacgcaat
     3001 taatgaaaac ttaccgcaag agttttacgg cattgtgata accgactatc tgtttgatat
     3061 taccggcaaa aaaatgtacg gcacgcttta ttcctcttat gataatgccc gagaggagcg
     3121 aaatttaacg tttaaaaaag aggtactggc agagcttgag gcgaggtatt ccgcttggcg
     3181 atatttgcca tattccgaac atttgatggg agcggttgat gattaaatat aaagcagaaa
     3241 cggctttgtc gcttttggtt gccatcacgc tatttgcgat tgtggtgttg agtttcagcc
     3301 agtggcaatc ggcacaaaac cacaggctaa atcaacattt ccaacagcaa caagcggtta
     3361 tgattttaga aaatcagctt gccctcaaat tagccgggtt agattgtgaa tcaagtatta
     3421 ctcaaaatca gattcgctat cagattcaat gctctggcaa tcgcttaacc attcgctttc
     3481 cgttaggcaa aattgagctg aataatgatt gaatcgtccc tcgctttgga ggacaataat
     3541 tcaattagcg aggcgttatt atgtttacac tttaccaatc caaccaaatt tcatcactgg
     3601 cggagatgct ggtgaaaatc cagcaggtaa acccacttga agatccgttt gagccggaaa
     3661 ccattttgat ccaaagtcag ggaatggcac agtggctaca aatgcagatt gctgaattaa
     3721 acggtgtgat ggggaattgc gattttctct accctactac atttttatgg caacagtatc
     3781 ggctgttgtt cccggagctg ccgaaagaga atatttttga gcgtagttcg ttggtttggc
     3841 ggattatgcg gttattgccg agttgcttga cactatcgga gtttgctccg ctaaagcgtt
     3901 atttaggtga tcaacctaat aaagaacagt atcagcttaa gctctatcaa ctttctgcca
     3961 aaattgccga attgttcgac caatatttgg tgtatcgccc ccattggctg gttagctggg
     4021 aagagggcaa cttacaagcg atcgaaaatg agataaaaat tgcaactgcc gctaagccga
     4081 ttgattttga cttaattcga gccgatatga aatggcaaag ccatttatgg caacagattg
     4141 tatctgatct gcaatcggaa tctgatgagc aggtttttac tacctcccac cgtgcctatt
     4201 tgcaacaaaa ttacttcgct aagttagatg accttactga aacggaaaaa gccaaattgc
     4261 caaaacgcat tttcattttt gggatttcgt ccttctcgcc attacagtta gcggtgttta
     4321 agaaactcag cgagcattgc gatattcacc tgttcttttt taacccaagc gaaaaatatt
     4381 ggggcgacag tgtggaagaa aaagtgtggc aaaaattggc gttaagccac aagatttcgc
     4441 aagacgatct ggataactta ttggcggagc aaagaaataa actactgaat ctttggggca
     4501 aacaagggcg ggatttctta gctcaattaa tcgaatttga gccgaatacc atggatgtct
     4561 ttgtcgaacc agaggaaaac agcaacctca ataaactcaa aaaacagatt ttcagcttag
     4621 aaaatgacgc cactattacc gatttaaccg ccgataattc actccaaatt cattcgtgcc
     4681 acagcccaat gcgggaagtg gaagtgttgc ataaccagct cctgaatttg tttgagcaag
     4741 atagcacttt gctgccgaaa gatattattg tgatgtcgcc ggatattaat aaatacgctc
     4801 cttacattga tgcggtgttt tctcgctaca atacgggtaa tcgggatcct cgctatattc
     4861 ctttttcatt atccgaccaa gcatttacgc aggttgatcc gattatccac agtttcctgc
     4921 aactgctggc aatgaaagaa agcccgttta atgccgaaga actgtttgat ttactggaag
     4981 tgaatgcgat ccaaacccgt tttggcttta gtacggaaga tattcatacc ctgcgggttt
     5041 gggtgagaaa tgccggcgta cgttcgggtg tagaaatcga gcaacctcac tggcaaaact
     5101 acaattcgtg ggaaaacggg ctaaaccgtt tattgcttgg ctcaagcctg aaagaagagc
     5161 aggggatttg ggaaaacacc cttgcctttg gggatagcta tggcttaaat gccgagctgg
     5221 tggggcgact tgcctctttt attgaggctt tattagcgtg ggtaaacttt ctgcaaacgc
     5281 cacagccgtt ggcagcgtgg cagcaggcaa taaaaaattt gactgctgat ctgtatcaag
     5341 aaaatgccga aaatgctgca tcaattttat tgttgaataa tgtgaatgat cagattatcg
     5401 agcaaatttc cgcaacccat ttttcagacg atctgcaaat tgaggtttta gccttattgt
     5461 ttgagcagca gctcagccaa cattcacagc agcttaattt cttggtcgga cgggtgaatt
     5521 ttgccacctt gcttccgatg cgggcgattc cgtttaaggt aatttgcttg ctgggtatga
     5581 atgaggcaga tttccctcgc caacaacaaa tcaatagctt tgatttaatg cagtacgccc
     5641 cgaaaaaggg agaccgtgcc aaacgtgatg atgaccgcta cttgttctta gaagccttac
     5701 tttccgctca gcaaatgttt tacatcagct atatcgggca gtcgcaaaaa gacggcaaag
     5761 agatgctacc gtcgattttg gtttcccaac tgttagatgc aatgaatgaa gctttaacgc
     5821 ctgaatgcaa gcaacaatta agcgatgaag tggaagtttt ggtcagaaaa caacctttaa
     5881 gtgtgtttag caaaaagaat tttacccacc cacgagatca cgcttataac gcagagtgga
     5941 ttatcaagcc gactgttgcc gtacaagatt ttcttagtga gcctttaacc aatgaaagcg
     6001 tggcttcgct agaacttgat gaattaatct cttttgtaca aaacccgatt aggtttttct
     6061 ttctaaaagt gttggggatt tcgtttaaca cttatgatga caccattgat gaaagcgaaa
     6121 tttttgagat gtcggggctg gataactacc ggattttaaa cgaattatta acgataaatt
     6181 tagcacaaca gcaacgtttt tttgccgaag agcaactcaa aggcaattta cctgcttctt
     6241 attttgctca aattgccaca caagatttga tcggcaaaat taccgaaatg caagcggcgt
     6301 taagccacta tttagccagc gaaagccgta ttttgagtgt taatcgggag gttgagctgg
     6361 aacgccaaac cctcacccta aacggcaata ttgccaacct atatcagaat gaagtggtgc
     6421 tatggcgagt agggcattta cgagataaag acaagattca gacttggatc taccatttat
     6481 tattgtgtgc ctatttccct gaaaaaacgg tgaaattcta ttaccgagag ggtgagcaag
     6541 ttggtgtgtt gagctttgaa accgtctcgc agatagaggc attatcgcaa ttaagcattt
     6601 atttgaatgc ttatttggac ggattatcgc aagcccagtt agtgatctac gaccgaattg
     6661 aggaatatct caaaggtgat ggcacaaaca gcgaacaagt tcttatcgat ttagcagaga
     6721 aagatgagcg agacggcagc tatctccatc ggcttctcgc tcaaactaaa gagctggatt
     6781 ctcaagcgat tcaccaacgt actcaaagct ggtttagctt aatgaatcag aaaatagcga
     6841 aaggcgatta actacaagcg gtcgtttttg gctgaaaatt tgcaaaatga gaaggcgaat
     6901 aataattcgc ctacctataa aaatagaatt ttttccgtat tttactgtca atttattact
     6961 acaatgctaa tttcaaaagg agatgtatga aattatcttt tcttacccaa ttcgttgcag
     7021 cggcttttgc cctcaatgtg atgacttacc ctgcatttgc ggaagttgca aaaaattctg
     7081 aaaaaacgac cgctagtcaa ccccaatccc aactcggttt tgagctgatt aaacagagca
     7141 ttaacaaaag cccgaatgat aaagcgattt atcaaggtat taaacttgat aatggaatgg
     7201 aagtgctact gatttccgac agtcaagcga ataaatcgtt gatgtctgcc attattccga
     7261 ttggctcaat ggatgacccg atttctcagc aaggtttagc ccactatctt gagcatatga
     7321 tcttgatggg ctcgaaaaac tatccggaaa ccaacagctt agacggtttt ttaaccaaaa
     7381 atggcggtat gaataatgcc tcgactgctt ctcaccgcac ggcgtattat ctacaagtca
     7441 ataacgaagc ctttagcgaa gcggtaacac gactggcgga tacgttagct ttcccgttat
     7501 tgctggaaac caacgccaag aaagaggtta atgcggtcaa tgcggagatg gtgcgagcta
     7561 aatcgcacga tgggcattta ttgcacagtg ttaatttagc caccgcaaac ccggctcatc
     7621 ctgctaccaa atttgcggta ggcaataaag agacgttatc tgacaagccg gatagcaaat
     7681 tacaaaccga gttggagcaa ttttataaac agcattattc tgcgaatctg tttaaagtgg
     7741 tgctttattc caatcaatcg attgagcaga tggcaaaatt ggcagccaac actttaggca
     7801 aaatggaaaa caaacatttc agcataccgc aaaccgctga gccacgttat cgtgatgagg
     7861 acaaatcggt atttattcaa tataagccgg tgaaatccaa caaaatgtta gtcattggct
     7921 ttgattttcc gaatgacgaa atgcagttta agcacaaaac cggtaaatat attgcttata
     7981 tgttaaacaa taatactgac ggcacgcttt cggattactt gattaaacag gggttgtctg
     8041 acggcggtat tgaggcggtt agcagtgcca atatcgggcg ggatcgaggc tcgtttgaca
     8101 tctatattga actgacagac aaaggtttga gcgagcaaga tcaaattatt tcattggttt
     8161 tccaacaaat tgagaagatc aaacaagaag gcattcaaga gagctatttt agcgaagtga
     8221 aagagagcct gaagcaggat ttccaacatt tgcaagtgga aaaaaatatg gatttcgtgg
     8281 aatttattgc cgatcaaatg ctccatttcc cgttagaaca cgttatcgat cagccttatc
     8341 tgaccgaaac aatggataac gaggcaatta aagcaaaatt ggcggcaatg aatattgata
     8401 atgcccgcat tatgttagtc agcgatactg ccaaaaccga caagaaaacc ccttattttg
     8461 aagcaggtta ttcggtggca aaaatcacgc aagaacaaaa gcaaaaatgg ctggatttca
     8521 gtaaaaatcc acagctcaat ttgcctgaat tgaacccgta tttcactacc gattttacct
     8581 taaacaaggt cgaaaccggc ttaactaaac cgaaattgat taacgaccaa gcggggaatt
     8641 taatctatac aatgccgagc gtgtatttta ccaatgaacc gaaggctaaa atcggcgttg
     8701 gctttaatat tcgcccgaga aaagatgact taaagagcct gaccgcagcg tctattttgg
     8761 gttatatgaa caatttagcc caaaccaagt tagattttca gtcttcggtg gcgggtatga
     8821 atttaagttt agctccggcg gcaaacggtt tagccttaag tgcagagggt tatacccaaa
     8881 atctggctaa attaatgcta gacagcgtaa aacagttcag ccgctttgag tttaacgaag
     8941 acgtgttggc acaggctaaa caacgtttgc accaagagct ggatcgtaac gaaaaagaaa
     9001 acagccttaa tcaagctaat gcagcattaa gccgttttgc ctcttaccct tattttgatg
     9061 tgccgaaaca gcgtgagatg attgatagca ttacccttgc ggatattgag caactacgcc
     9121 agcgaatttt gcagcagagc agcggcttta agttgttatc ggtggggaat ttgtcggctg
     9181 agcaggtttc tgctctggca gaggatttac aagcggtcat aaaaaaccaa aaatctgcaa
     9241 atgctaccgg acagtatgtg gatgtgagta ccagtcagcg taagattaat gtgattaaaa
     9301 gcgtgccgaa tgaagataat gcgttgctaa tggcatttat gccgaacggc tataacgagc
     9361 tggaaagcct tactcgagcc aaattgctca gaagcattat ttcccgttgg tattttgatg
     9421 atttgcgtac tgataagcaa ctaggctatg tggtttatgc gacagataat atcatcggga
     9481 aaaccgccgg tatccagttt atggtacaaa gcccgaatac cacaccggca gggattttag
     9541 agcataacga acgtttcttt acacaaagtt tcgaacgttt aaaaaatcta tctgatgagg
     9601 aatttggaaa atatcgtgat agcctagtgg aaaaactgca atataaaccg gagtctttag
     9661 cggaagagtt ttctgagttc ggttcagact ttagcagaaa taacccgaaa tttgaccgct
     9721 tgcaacaggt gatcgaatta accaaagcac tcaccaaagc agatattgtg gcattttacc
     9781 aaaaagctgt gattgaaaag caaggcttcg tgtttgtcag ccaagctgtc ggcaccaaaa
     9841 ccaaagctga agacgttgcg aaatttgacg gttttgaaca gatcgaaagc attgaaaagc
     9901 tacaacgaga gtttgagatt aaggattatt agagagttat tagagagagt taggggcgaa
     9961 aaattttcgc ccctcatttt ttaatccaca attttcaccg gatataagta agtatatccg
    10021 aacggacttt gtttgtagcc ttcaacacgt ttgctggttg gggcaaagtt aattgagtga
    10081 gccacgttaa tccacggagc ttgctctctt aagataacct gtgcctgctc gtataactta
    10141 gtacgttctg ctttatcaga tgagcctaat gctttttcta ataacgcatc taactcaggg
    10201 ttagtaaagc gagcatagtt actgttgccg atatttggcg tgccgaatag tggcgataag
    10261 aagttatccg gatcgccgtt atcgcccgac caaccgtaag ttccggcggt taattcaccg
    10321 gctttggtac gcttgatgta atcaccccat tcataggtga ctaattttgc ttttacgccg
    10381 attttttccc agtcggcttg aataatttca gacatacggc gtgggttcgg gttagaagca
    10441 cgcaccacag gctgcaccca taattcggtt tcaaaaccgt tcgggaagcc tgcttcagct
    10501 aatagttgct tcgctttttc cacgttatat tctgaatccg ctaagctgtc gttatagccc
    10561 caaatggttg gcggaagtgg gtttttcgcc gcaaaaccgt taccttggta aactacatca
    10621 ataatcgctt ttttatccac tgctaagttt aacgcttggc gaactttcac gttatcaaac
    10681 ggagcttttt cggtattgaa tgccacataa gcaatgttca aacccggttg agaaagtaaa
    10741 ttgattttcg gatcattttt cattttctca atgtcggttg catttgggaa gtccattaaa
    10801 tcacattgac cggattgtaa tttcgcataa cgggttgttg catccggcac gatctcaaaa
    10861 atcaaacggt caatgtcagg cttacctttc caatactctt tgtttgctac ataacgactg
    10921 gcttggtcta gcacataacc gctaaacaca aacggacctg tgccgattgg cgtggtatct
    10981 accgcttcag gtatgccggc tttcatcatt ttatccgcat attccgccga ataaatggag
    11041 gtgaaatcca taccaaggct ggataagaat gacgcatcac gtttggttaa ggtaatacga
    11101 acggtgctgt cgtccacttt ttccaccgat ttcaataatg tcgggaattt cattgcgttg
    11161 aaatacggat aagtgccgtt agagacggtg tgatacggat gatttttatc taactgacgg
    11221 ttaaatgaaa atactacatc gtccgcattc aattcacggc ttggagtgaa gtctttgttt
    11281 gaatggaatt tcacgccttt gcgtaattta aaggtgtaag ttaagccgtc ttcgctgatt
    11341 tcccagcttt ctgccaatgc cggttcaata tcggttgtac ccggcacaaa ttccaccaag
    11401 cggttgtaaa tttgttgcga gctggcgtta taagataaac cgtccatcat taaaatcggg
    11461 ctaaaaccgg ttggcgaacg gctaacgcag tttacaaagg ttttctcggt ttgcggtttt
    11521 gctgctgccg cagtaggttt attttcgttg cttttatcat cgcaagccgc tagagctaat
    11581 accgctaaaa cgcttgcact aattttggtt aacgttggaa atttcatatt attctccgct
    11641 taatcttagg attaacttac gaagattacc ttttccacaa tgaggagtaa agaacaaaaa
    11701 gcattatttt tgcaaatcaa tccatagaat tagataccgt caacgtcatt gccacccgtg
    11761 atccaagtaa atttgccgat acgccacaaa aacaaactaa agatgcactt ttggtaaaac
    11821 aagcgacgag tgtggcggcg gcattaaaag cgttgccgaa tgtggatgtg caaggagggg
    11881 cccgtgcgat tgtgcagaag ccgtctattc gtgggttgag cgataatcgt attgtgcagg
    11941 tgattgacgg agtgcgtcag aattttgatt tggctcaccg tggttcttat tttgtgccga
    12001 tgtcattgat tcaagaaatt gaagtaatca aaggtccaag cagctcgttg tgggggagcg
    12061 gtgccttagg tggggtggtg gcaatgcgca caccgaatgc gttggattta ttgaaaaata
    12121 atgacaaatt cggggcaaaa atccgtcaag gttatcaaac ggcgaataat ctttccgaaa
    12181 ccgaagcctc ggtgtttgca gcaaatgatc ggtttgatgc cctgctgagt ggtttctaca
    12241 ataatgctga caatttgcgt agcggtgaag gcaaggaact gaataacacg ggctataagc
    12301 aagccggcgg tttagtaaaa ttcggctggc aaattaacga tactcatcgt ttggaattat
    12361 cccatcgtca tagccaattt aaacaaactg caccgggtaa taacgaggta gaaaatcaat
    12421 ttaccgataa tgatgttagt gcacaaatta gtgcttggca tgcggctaat cctggaaatc
    12481 caagtaatcc agtatatctt gcgaaaatgt tagcctttta cggtcaatta cattcaagtc
    12541 ttggtagtgt gagttattta agtgatcaaa aaattaccga taaaagcacc tcacttaact
    12601 actatttcaa cccaagcaat ccttatttga gcacacaagt gacattatat agcaatagta
    12661 ccactgaaaa cgaacatcga aaaataagtg gtgtggaaga tcaaactaaa ctaagcactc
    12721 gtggtgtgaa tatccgtaat cattccgaat tgtcttggtt ctccttggtg tatggcgtgg
    12781 attatatgtt ggataaagta gccactcagc gtgggagaaa taatacggac gcacaatacc
    12841 gtgctaatcc ttatgatgct aaatctaaaa ctacaggtgc ttatttaatt gcacatattc
    12901 cgctgtttga tgaaaaagtg gtcttttctc cgagcgtgcg ttacgaccgt ttcgatactt
    12961 caagtgaaac ggtgaaatat aaagacagcc attggtctcc tgctgcaaaa cttacttgga
    13021 aagcgacaaa ttggttggat ttaaccgcga aatataacga agctttcaga gccccttcta
    13081 tgcaagaacg atttgtgagc gggtctcatt ttggtaccac agtgagagga ttacctatta
    13141 ataatatttt cttaactaac cctaatttac gcccggaaac ggcaaaaaat aaggaagtaa
    13201 ccttcaatgt acattttgat aatgtcatct cgcaaggaga taaatttaac tttgaagcga
    13261 cttatttccg taatgatgtg aaggatttga ttaatcttca agtattcaaa gcaaatccta
    13321 caagcccaat ggaatttatt cccactcgtt cccaatatca aaatattgcg aatgcacgtt
    13381 tgagtggtat tgaattacaa actcgttatc aaactgaacg tttggcagtt tttgctaact
    13441 acggtagtac aaaaggtaaa gataaagaca gcggggaagc cttgtcgaac attgctgcaa
    13501 gcaaaatcgg cttcggggtc aattatgccg tggtgcaaga caaattcacg gtgggggcaa
    13561 acgtaacccg ttatcaagca caacatcgtg tgccgaaaaa ccacggcgtg acttaccaag
    13621 gctatacgct gaccgatcta cacgccactt acgccccatt aaaaggcgaa tggaaaaacc
    13681 tgcgtttaga cgtggcggtt gaaaacctat tcgataaaaa ataccaaccg gcattcagct
    13741 taatggaagg cagcggtcgt aatgtgaaac tcagtgcggc ttacagcttc taatgtcttt
    13801 aacggaagac ggcacaagcg gtcgttttcc ggttattttt tgcaatatta aaagggagtt
    13861 actatgaaat tttatccgtc gctgatcgca agtgcggtca gttttgccgt tgttttgagt
    13921 ggacaagcgg cagtgaatgt gccggatgcc ggctcgttac agcgtgaatt agaccaacgt
    13981 caagctcaac aaaaagtcaa accgagtggc gaatggttta atcaagcggc aaaagcacct
    14041 tataccgcaa cggacggtca agaactgaca tttccattaa ctcaggtaca agtttttgat
    14101 cgaaccaacc aagaaatctc taccccggaa ttagccccga ttttggcaaa ctatgtgggt
    14161 aaagcggttt cgctgaccga tttaagcaac ttggcaaatg agatcaccga gttttatcgt
    14221 agccacaatt atctggtggc aaaagccatt ttaccgccac aggaaattga acaaggtaag
    14281 gtgaaaatcc tgttgtttaa aggcaatgtc ggtgaagtgc ggttacaaaa tcagagtgct
    14341 ttaagcgata aatttgttgc acgccttgcc aacaccacag tgaatggttc ggaatttatc
    14401 ctaaaagacg aattggaaaa atttgccctc acgatgaatg atgttcccgg ggtgaatacc
    14461 ggcttggagc tttctgccgg taagcaagca ggcgaggcga atttgctgat taagctccaa
    14521 aatgccgagc gtttctcagg ctatgtatcg gcagataacc aaggcaataa aaataccgga
    14581 cgttaccgtt tagccacagg gataaaagcc aataatctga taggttgggg cgatgagttg
    14641 aaagtggatt tgatgagttc caacaacgct aatttaaaaa atgcgcgttt ggattattcg
    14701 agcttgattg acggctacgc tacccgtttg ggcttaacgg cgaattatct cgactacgaa
    14761 ttaggcggta actttaaagc cctgcaatcc caagggcata ctcacaatct tggggcttat
    14821 gtgttgcacc cgacaatccg cttgccggat tttcggttaa acaccaaagt cagctttaat
    14881 catcaacgtt taaccgacaa acaacaagcg gtcaatgtgg cacaaaaacg ccaagtaaac
    14941 agcttaacgg tgggcattaa cgggtcgtgg aattcgctta aagacggcac aagctatttc
    15001 tctctgtctg ccttgttcgg caatttagct aaccacacca acgagcaagc gcattatgtg
    15061 gcaacagatt ttcagcccaa atcccgtttt acggtctatc aatacagcct gtctcacgaa
    15121 caagcgctgc caaaatcctt tgccttcaac cttggcgtga acgggcagtt tgcggataaa
    15181 accctcgaca gctcacaaaa aatgttactg ggcggtttat acggcgtgcg tggtcatcaa
    15241 gccggtgtcg cttcggtgga tgaggggcat ttagtgcaaa ccgaactcaa gcattattta
    15301 ccgctctttt ccaaaagcct gctgaccagc tcggtcttct atgattatgg ttggggaaaa
    15361 tactataaac acagcggatt tttggcgcgt ggtgtaaaca atagcgtgaa attacagagt
    15421 atcggagcag ggctttcgct ctctgaagca ggcagttatg ccattaacgc cagtgttgcc
    15481 aaaccgctgg gtaaaaaaat cgagaatgca gataaacacc aattctggtt ctccgccatc
    15541 aaaaccttct aaggagacaa actatgttta aacgtaatgc aatttctctc tgcattttga
    15601 ccgcttgcag cggtttagcc tatgccaata cagcagattt gccgcaaggt gaaagggtgc
    15661 gtgtcgggac ggcaacgatt gagcgcacaa ccgataaaat gaccgtgaat caatccagca
    15721 ataaagtaca aattgattgg aacagctttg atattggtaa gaataaagaa gtggaattca
    15781 aacagccgac agagatggcg gtggcatata accgtgttac cggcggaaac gccagtcaaa
    15841 ttcaaggcaa gctgaccgca aacggcaaag tgtatttagc caacccgaac ggtgtactca
    15901 tcaccaaaga tgcggaagtg aatgtgggcg gtttgttagt gaccacaaaa gatttagaaa
    15961 aaatcagcga aaacggcaca aaagataaat tcagtcgcaa attagcgaaa gaaggcaaaa
    16021 ttcttaacca aggtaaaatt acggccaaag gcgagcgggc ttttgtggta ttggtgggcg
    16081 acgatgtggc taatgaaggg gaaattaacg ccaaaaatta ttaccacaaa gaaacgaaaa
    16141 aagtcaccga atgttatgac gattcttgga gcttggtaaa acaatgctac gattttgata
    16201 aagaaatcgt gaaaagtacc agtggagaag tgcatttatc ctccggagaa aatgtcacct
    16261 ttactttaag cgaccgctat attgatgtgg cgttagacga taatacggtc aatagcatta
    16321 tcaaaaatga cggggcaatc atcgccaatg gtgacattac cctcactgcc aaagggcgaa
    16381 atcaagcctt agacagctta attatcaata acggcgtatt gcaagccaat aaggtgcaaa
    16441 ataaaaacgg tacgatcatt ttatctgccg gtgaaaccca attacacgaa aaaagccaaa
    16501 ttaaaggcga gaaagtgagc tttgccgaag cttcttatta cggtccgaca gaagacatta
    16561 aagtggtttc caaaaccggc tcaaaagtga ccgcacctgt gatcgatttc aaaggtaaaa
    16621 ccgtgaatat tcaaggggaa tttgggcgtg aagacagcac cgatctctat aacgatgaac
    16681 tacaaatcct caaaaccacg gtgaatattg aagtcccgaa tacggaagat attcgcattg
    16741 cagataccga caacggaggt agcggttcct ttatacaagc gggtgcttta gcctcattac
    16801 ttgcaaataa cggacgggtt aatgtacagg gcaaaggttt tgatgtctca ggcaagttga
    16861 atgtgaatgc ctttaaacaa acggattccg tgctgaaatt tatcaatcag gcgggcatca
    16921 atatccacaa tgccgatatt cacgcaaacg ggcgtttatt ctttgtgaca aacttgccga
    16981 atgacaccga tttccaatcg aatatccgca ttaccgacag caaaatcaac ttaggcaacg
    17041 gctcaatggg ctttggtcgc agtagcaaac gttgggaaat gcacgatgtg gttcgacgtg
    17101 ccgatacgga actgcgtaaa aaattcaatc tggatatgaa aaacgtggaa ttaaaccaag
    17161 tggatgattt tgtggtagcg ggcggtttcc aacaagttaa tttggataac gtgaaagccc
    17221 gtggcaaaac caacttctat ctggattccg gcaactcccg catgtttgtc ggtgagcaga
    17281 tttatgaata tggcgtaacc gatattgaaa aacgcaccca attggcgaat ttagaccagc
    17341 gtagaaaacg ttggaattcg gataactatg atgagaccga tctcaactgg gaatacaacc
    17401 aacgctttga cggctttgca gcaaaacaca atcaccgcgc gccgattgcc gatacggaaa
    17461 tcaatattgc caatagtgat atcagcttag ataacggttt tgtgcattta atggcagaaa
    17521 aaatcaatct ggacgacagc aaaatcaata tcaccttcaa ccaagacaac agcttggatg
    17581 aaagtaccca aatcaaccgc ttaggactaa acggcaaagt gtcgatgaaa aacagccata
    17641 ttaacgtagt gggcgatgaa aaagacggta tctcaccggc tcgccattat gccacgatgt
    17701 tcttagtggg ggagctgctt ggtgaaaaga gttctatttt cctcaaatcc caccaaggtg
    17761 cagtattgag aaccgacagc aatgttacaa ttgccggtaa aaacagcaaa gacgacctca
    17821 aaattaccgc cattaccacc ggtaaaaaaa tgggcaatga aatcatcgga ccggacggct
    17881 tgccaacctc ggaagataac gatgccaacg ccagcaacac cgcctttgcc atcggctatg
    17941 aacctaacgc tacggctatc gtcgaaaatg caagcattac cgcattagca ccaaacggcg
    18001 gcttggcata caccggcacg tctaaaaccc aaattgacgc gaaggataat gctaccttta
    18061 ccttctttga aaaacctcga gccggctatg acaaattgct tggcgacatc aaaggtaacc
    18121 ccgataaatt aaccccacgc gatttcgccc gtttatacga caacattaaa ggcatcaaag
    18181 ccagcagcct atccgaacaa cagcttggcc tagcagacac cgcgaagaaa accagcgaac
    18241 acaccttagc aaacagccta gacgtagaaa atttggtttc agtgacagtg tgtgatgagc
    18301 agaataagtg tgaggagcgt atgttaggta acaaaaatac caatgctaaa gttattgtcg
    18361 gagatatcaa atttgagtag cgttgaagaa agtggtagaa gctcagactt gatctgataa
    18421 agcactataa aaagtgagag tttcccgttt agaatatgag tgtcaaaatt caatctaaac
    18481 aaaaaggaaa ctctcatgtt ttattactta caatcccctc attaaacaca agaccggttt
    18541 attaaattta gcagaagaac cgggcaatat ctctcaagcc tgcaatgtgg tgggtatgag
    18601 cctagataca ttctattgct atcaacaagc ggttattttt ggcaactaat ttgcaaaaaa
    18661 acaataaaat ccgaccgctt gtagagggtt aatccgccct tagtgaaatt tcaccgatgc
    18721 cgaaatagcg gaggttgtcg ccctgtttta gaatgagttc gccctgctcg ttaatgcctt
    18781 gcgaaatgcc gtggatttct tcggcttcgg taatgagctt aaccgcttta tggcggaaaa
    18841 ggtcgaaact ttgccagcgt tcggcataat gagcgaagcc gacaagcgga taaattttga
    18901 gatttttttg caattcatag gctaaacggc aaaccaattc gttgcggttg aaatgatatt
    18961 gcgataaatc tgcccacgct tgcgtcacaa tattttcatc cacttttgcc attcctaggt
    19021 tcagcccaat gccgataacc acatctaaac cattgcgatt ggcttgggtt tccaacaaaa
    19081 tgccccccat ttttttgcct tggtaataaa tgtcattcgg ccatttaatt tgaatatctt
    19141 ttacattttg aacagtaagg ctttccgcaa tgatcaaggc taccactaaa cttaagggcg
    19201 gtaaatctgc cgcctgctcc atcgggtaat gccataaaat cgagaaatag agattttcac
    19261 tctcgggcga ataccaagtt cgacctcgtc tgccacgtcc ggcagtttgt ttttcagcga
    19321 ggcaaaccgt gccgttttcc aaacgttggt gatgagtgag caaatattca ttggttgaat
    19381 caatttcatc gaacacaacg gcttgcccgc aaattaaagc attttggatt tgagcttggt
    19441 taagtttcat tatttcccca cttagcgagt gattttttcg ctatcgacct caccgttttt
    19501 accgataaaa cgcacttcag gctgaatttc taccccaaat ttttctttca ctctctggcg
    19561 aacggttttg gctagagcca agacatcttg ccctgttgca ttttctttat taatcagcac
    19621 taaggcttgc tgggtatgta ccgccgctcc gccaatttgt aagtctttca gcccggtttg
    19681 gtcaattaac caacctgcgg ctaattttac cgttccatca gcttgagggt agtgaggaat
    19741 ggctgggaat ttggcttgta ttggtgcaaa ttgttcgttt gaaatcaccg gatttttaaa
    19801 aaagctgccg gcattgccaa attcgtcagg gtttggcaat ttggaggagc gaaccgcaca
    19861 gacttcatca aaaatctgta ttggcgtaac ggtttccgga ttgagttggg ctaatgatcc
    19921 gtaacttagc accggtttcc acgctttggc taactttaag cctaccgaga taatcgcaaa
    19981 ttcatcacgg tattggtgtt taaacacact ttcacgatag ccaaattcgc actcggattt
    20041 ggatagctta aagagttctc cggaacgtaa atttaacact tccacgaaat cacatacctg
    20101 ttcaaattca accccataag ctcctatatt ttgaatggga gcagagctgg cgacacccgg
    20161 aattaacgcc agattttcaa tgccggcaat attgtgtgcc aacgtccatt taaccaattc
    20221 gtgccagttt tccccacctt gaacgtgcaa atagtggaaa tgttcgtctt cgtggtgcgt
    20281 aatccctttg agtttattta ctaacaccac accgtcaaaa tcctctaaaa acaaaacgtt
    20341 agagccttgc ccgagaatca agattggcag ttgagcgtta aaggcttttt gccattcgct
    20401 caatagctgt tcgactgtgg taaattcaat aatttgggtc gcttttgcag gcaaatggaa
    20461 agtgtgaaaa ggggttaagc tatgtttcat catcaaatta gttagttaag aagtggaaat
    20521 aacaagcggt gatattttta caaaattttg caattaagat tttgggcagg cacaggatct
    20581 gcccctacat tcagaattac cttgccccat ataccacaat ggttttgccg tgagcagaaa
    20641 ttaagccttc gtcttccaac atttttataa tgcgtccaac ggtttcacgg gaacaaccga
    20701 ccatttgccc gatttcttgg cgggtaattt tgatctgcat accttccggg tgagtcattg
    20761 catccggcat tttagctaag ttgagcaagg tttgagcaat gcgaccggca acgtctaaaa
    20821 aggcaagatt accgacttgg cgtgaagttt gacgtaaacg gcgagccatt tgtgccgata
    20881 aatacattaa aatatcgggg tttaaatgga ctagttgttt gaatttttta taggaaattt
    20941 ccgcaatttc acaaggacct ttagtgcgga cgtaagcggt acgttgttgg actttttctt
    21001 caaataaact taattcaccg acaaactcac ctgtgcctaa gttagttaag agcatctctt
    21061 tggtttcatc atctttgatg taaaccgaca ctgagccatt cacgatgtag aaaagtgatt
    21121 ctgcatcttc accggcgtga atgagtgtat atttcgccgg ataacgatgg atatgacaat
    21181 gggttaaaaa ccactccacc gcagggtcgt gaatagaggg cggaggagtt acattttcca
    21241 gaggagctgt tgaaagtgtc atatcttgca tagtatttcc tataactctt atactaggtt
    21301 aaatttttag aattttaaca cgaaattaaa ggttagccta aaaaagattt tttgtcttta
    21361 atatcaaggc tttcgtgtaa ttccgaccaa acaatcacca ctttatctgc cttaagttgt
    21421 gtgagtaatc gttctctttt ttctgccaga gaaagttccc tttccccgta gtctgtgcct
    21481 tctcgtaaaa tgaaggaatc taaaatatta tgtaaggttg attcttcgag ttcttgccaa
    21541 ggtataatca taattaatca aataaaggct taataaatgc ccactgtttt tcaaaatgtt
    21601 ggtgttggtt atagctgaaa ttagaacgaa ccaagcgtaa aaattgccct tcgcagaaat
    21661 tcactaaata accggctaag gctctttcgt cttcaaagct cttgcgttca cgcagtttac
    21721 taagttgcaa aatattggca aattgtaact ccaagttatc aaagaatttt gccactcgag
    21781 ctttgagcaa ctcctcttca aacatcaagg cgtgtccggt caggatgcgg gtaacgcccg
    21841 ggtttttgcg agcaaattct aaaatcacat ataaaattgc tcgcaccgaa ttggcactgc
    21901 tgtcttggcg tttattggcg tgaatatagc tggtgagggt ctgctcgatt ttctcgatta
    21961 acgcttcaaa catcttggtt ttacttggga aatagcgata caacgccccc tccgacaccc
    22021 ccaccgcagc ggctaaacgc tcggtagtga tacgctgcat tccctcttca gaatttaaca
    22081 agctgattaa cacttccaac acttgttggc ggcgttccac cactgatttt ttcggcattt
    22141 taattttagg ttctgtcatt gccaatccta ttattgctta cctgaatgcc caaaaccgcc
    22201 ttcgccacgg tcggtctgct caaactcttg cacaatgtta aaacttgcct gaaccaccgg
    22261 cacaaagact aactgagcaa tacggtcgcc cacgttcacg gtaaaatcag cttggctacg
    22321 gttccaaagc gacactttca gctcgccttg gtaatcgcta tcgatcaagc cgactaagtt
    22381 gcctagcacg atcccgtttt tatgccctaa acctgatctt ggtaagatca ccgctgccaa
    22441 attcggatcg gcgatataaa ttgaaatccc cgttgggatc aacaccgttt cacccgcttt
    22501 taccgtcagc ggctcgttga gcatcgcccg tagatccaag cctgccgagc cttcggtcgc
    22561 atacgcaggt aatggaaatt cattgccgat acggctatct aaaattttta aatcaatttg
    22621 tttcattctt tttccttttt gtaaattttt aaaactatat tattcagtta taaaaggttt
    22681 taattgtatc gttccaagtg gaagttcagt caatatttcc cagcttgtgt tgtggtaaaa
    22741 tcgaaataaa cttgcaacgt tttcaacgta gcttgaatta aatttacctt ctaatggctt
    22801 tattcctcca gtaaaatgaa ttatatgtgg aatataattt ggcgaaattt tttgctgggc
    22861 aatatcatct aataaatgtt ctgtctgata attatatttt cgatctaact caatccaatt
    22921 atattgaaag cagtaattaa gaatatcttg atccccaaat ggtaaatttt ctttaaatct
    22981 ctcagtaagc tgtataaatg gttgcttact aaaatgcttt gcatttagat aaaatacacc
    23041 agcattgaaa tagtttttgt aaatataggg atgatttttt agtttgttta cataaggatc
    23101 agcaattgca gcaatacttc caaaagaaaa atctaggttt gtaaatggat ccgtaatatt
    23161 tccattaacc acaagatcgc aatctaaata aatccaatat gggctatcgc tgtgttcaaa
    23221 tagttcttca atataatatc gtaggtaagt tgaattagta atatagccgt tggagttaaa
    23281 atttgctaaa ttatttgaat ctaaatagcc aagtcttaat gtggaatatc tattttctaa
    23341 ataggggcgt aatgtttcta tccagtggtg agaaatatcg ccagtactca atataaaaat
    23401 agataaatga ttatgatgag ctaatagtga ttttaaggca atctctaaat atggcaggta
    23461 gtttttatct gctgaaaata caatattata ctttttcatt ttgatctttg accatatttt
    23521 tctcttcttg cacaattcgt tcaccgattt tccaataggc ttcgaccatt gccgaattca
    23581 cggcttgata cgccttttgg cgagcagata aaagaatatg tttaatgtcg ttgatatact
    23641 gatttgacgt aagttgcata attttcatcc tattaccctt aagatttcac aaggtagcca
    23701 gccaatttcg ttttctcttt tgacaattgc ccattggtaa tgtagttcaa ggaattctac
    23761 tctctcgcct tgtgctgcaa caagttccgt tgggttataa tcgcatatca atttatcttc
    23821 gctaataaaa tggcttggca caaaggtttt ccaaccgtca atttcacagg caaaccagtt
    23881 tgggtagttt acacattcac tccctaatcg aacggcagta ccagctgaga atgtaggaaa
    23941 tttcccttcg ccttgatgaa aatggctaac cagtaatttc attatttttc tcgataatgt
    24001 tttacaattt cctgtaccaa actttctgcc aatttgcttt tatccgccag aggaagcgtt
    24061 ttttcaccat ttttccagaa caaatgcaac gcattttgat cctgcccgaa cacttgtccg
    24121 cctgagacat cattggcaca aatcatatcc agatttttgc gttcgagttt cgatttagcg
    24181 tactccgcca cattttgcgt ttctgcggca aaaccaacca caaaagggcg gttttcggca
    24241 agattggcga cgttagcgat aatatcgggg ttttttacca attttagcgt gagttcatca
    24301 ttggcatcgg ttttcttaat tttttggtca gagactgccg ccattcggta atcggcaacc
    24361 gctgcacagc caataaaaat cgcagatttt tgggcaaatt tgaccgcttg ttgctccatc
    24421 tcaaccgcag attccacatt aattcgttcc acatttttcg gcgttggtaa attcaccgga
    24481 ccgctaatca acgtaacctt tgctccacgt tcggcaaagg cattagcaat cgcgtagccc
    24541 attttgccgg agctgtggtt gctgatataa cgcacagggt caatcgcctc acgagtcggt
    24601 ccggcggtaa tggttacatt taagccctct aaatcttgat tgttggagaa atgagccaac
    24661 accgcttggt aaatttcttc aggctcagac attctgccag cccccacatc accacaggct
    24721 tggaagccac tattcgggcc gatgagctga acgccacgat tgactaaaac agacagattt
    24781 tcttgcaccg caatctgttt gtacatttgt tgattcattg ccggtgcaag caaaatcggg
    24841 cttgcagtcg caaggcagag agtggaaagt aaatcgttgc ccattcccat acgcaggcga
    24901 gcaataaaat cggcacttgc cggggcgata acgattaaat ccgcccattt tgccagctca
    24961 atatgcccca tcgccagttc ggcttgtggg tcgagtagtg aagtggaaac cgcattgccg
    25021 gaaatcgctt gtaaggtcaa aggcgttaca aaggcttctg ctgctggggt tagcactaca
    25081 cgcacttccg catttgcctt ttttaagtgg cggataaatt caatggtttt gtaggctgca
    25141 atcccaccgg aaatgccgac taaaattttt ttgttttgta acatctttac tatccttaaa
    25201 gcgtggattt attttgcata ttttagcgga ataaggagtt gctcacaact tcactatttt
    25261 tgcgatcttg ctcgaaaaat tgaataaatc cctttgtctg caaaggttgg ctcttttatg
    25321 cttaactaaa ttgatggagg aaaaaatgaa cgattttttt gatgaagatt ctcaagagcc
    25381 aacaatgatg ccgcgtgaga aattattaac acagggggca gcctcattaa ccgattccga
    25441 attattagcg atatttttac ggactggtac gaaagctgtg cctgtgctgg cattggcaga
    25501 gagtgtgttg atggcatttg gctcgttacg ccaattactg aatgcaaata ttgatgattt
    25561 ttgcaaaatt tacggtttag gcaaaaccaa atacattcag ttacaagcct ctaaagagat
    25621 gaccaaacgc tatctggctc aacaaatgga atttagcgag atgattcaag ccccttatat
    25681 ggcgattatg tatttccaaa ccgagttgga ggaagaagaa cgggaagttt ttatggtgct
    25741 gtttttggac aaccaaaacc gattgattta taaagaaaaa atgttcttcg gcaccattaa
    25801 tcaaactgct gttcaccccc gagaaattat taaaagagcg ttaaaatata atgccgcggc
    25861 gattattgtg gctcataatc acccctcagg ttcttgtctg ccgagtgagt cggacagaag
    25921 tttaactaaa aagatcgaaa tggcgtgcga attggttgat attcgctttg tggatcatat
    25981 tattgtcggc aaaggggact atttttcgtt cgaggaagag aaattagaga tgaaggagca
    26041 ttcatttttg caaatttctg atagaaaatg accgcttgct ttatgtaacc tttaacattt
    26101 ctcctgaaac agtaaaagat acgcatataa attctacttg aatataacaa atgaaatcgg
    26161 tataatcggc agtctttatt acatagactg tggtcgggtt aatgcctgac gaggcaatca
    26221 aaatcggagg ggttggttga gcaacgcctt ttgtgagatc gcccgaacca tttttaagct
    26281 taaaattatt ggagaaattc aaatgtcaag agtttgccaa gtaaccggca agcgtccagc
    26341 agttggtaac aaccgctcac acgcaatgaa tgcgactaaa cgtcgtttct taccaaacct
    26401 tcacactcac cgtttctggg ttgagagcga aaaccgtttc gtaaccttac gtttaactgc
    26461 gaaaggtatg cgtattattg ataaaaaagg cattgatgca gtattagctg aaatccgtgc
    26521 tcgtggcgaa aaaatctaag gagctaaaaa atggcagcta aaggcgctcg tgagaaaatc
    26581 cgtttagttt ctacagcaga aactggtcac ttctacacaa cagataaaaa caaacgtaat
    26641 atgcctgaaa aaatggaaat caaaaaattt gatccagttg tgcgtaaaca cgttatctac
    26701 aaagaagcaa aaattaaata attttgtttt aagatttaaa acccagcgaa tgctgggttt
    26761 ttcatataca aaaaattagt gaaaaaagac cgcttgtatg attaaactaa tgatagctta
    26821 aaatcattac ttgacaaggc ttggctatat tcaataggta gtcctttatc tgtgataatt
    26881 tgtgtaaagt tatcgagttg agttgcacga aataaagagt attttccata tttgctgcta
    26941 tcggcaacca gtactttttg tttggcgttt tgttggagca ttctttttaa attagctttc
    27001 tcttctgtag gtgctgtaac tcctttttct aagctccaag aattacagct cacaaaagca
    27061 atatcaggat taatattttc taataaagtt aaactatgat taccaataca agattgacta
    27121 ctattatcta ctcgtccccc tgtaataatt aattctattt gcttatattc agagagtaat
    27181 aaagcaatat gtagatcagt tgtaatcact cgaagtggca tatgagcgat ttttttcgca
    27241 atgcatagcg ttgtagtgcc agcatctaat aaaatagaat ttcccggtga aataagcgaa
    27301 acggcatatt cagctatgcg ttctttttcg acaatttgct taaattgctt ctcatttgtt
    27361 gttggttgaa acggtataaa ttggtttaag ctgacccctc cgtgtgtgcg aatcacgacg
    27421 ccttcttcat ctaattttat taaatcacgg cggatagttg caggagaagc ctcagtcact
    27481 tttaccagtt gctctacggt agcaatattg tggtttttta ggaatagtaa aatttgttct
    27541 agacggtttt tagacatata aactctctaa tttttaactg cttttactat aagtaatttt
    27601 ttaaaaataa gatagttaaa attaaagaac ctaaaacatt gttgctttag gttctttgtt
    27661 gttactagtt cattatattg cttaagagtg tgttgtttcc aaatcctcca gatttagtca
    27721 ttacagtgat gcctgagtag ttgccctttt caatggagca taaaggaacg cccggtacta
    27781 ccgcatattg tacattcatc tctgttacat tcatttgatc taataatgct gctgcaccat
    27841 ctccaccaaa taatataagg ctatcaaatt tttcattatc aaggcagaat ttacttaaat
    27901 cagctaaatg ttgagaaatt tctttagaag tttccgtgat attggcagat tttgcattta
    27961 caacttttgc agggtttgcc cgaataataa catgatctct actaaaacgt attagagcgt
    28021 ttaattgtag tttcagtgaa tgttctgatt gcgagtagtt aatcaactgt gaaggcgaag
    28081 gattaaatac aatagatttt cctcctaaag ttgaaatata ttcatcaact tgcagttggc
    28141 ttgtttcgtg aattgaggtt acgacaatta atgctctacc taatttaaga tttcgctctg
    28201 gttgttgttg attttggata tttttcaact tctgtgccaa tccggctgag ccaacaggaa
    28261 taattttatt acctatgtga tttatgactt gggcaatcat tgagagatct tcgtgcgttt
    28321 tagcatcaat aacgatctgt ttatattcac tattttcaat agatgcctgc aaattatcga
    28381 ccgtatcaca cgggattact tgagcatcag gcaatagttt ttgcatagaa gatgaatgca
    28441 cagggcagat aggatctttt cctgaagcag tttcatttac aggaacacca ttaacatata
    28501 aatgaccagc ttctatagtt cttcccattt ctggatatgc aggacaaata attgctttaa
    28561 catcgggata taaaccagcc caagctttaa tagcaccttc aatctgatat ttaacagagc
    28621 ctctcattgt ggaatcaatt ttaaggtaaa tttgcccgat actattttga atagcattgc
    28681 taattgcaat ttgagtcagc tcttttgctt tctctccaat tgctcttgaa tctgtagaaa
    28741 cagaaattac ttgggcttta tcaggatgaa tttgggctaa tgccgaaact ttagttttta
    28801 agacagtgtc aaatcctgat tcagcaaaca taaccgcggt atcatttgca ccagtaaggt
    28861 catcagcaat aactaagagt gtctctttca tagattttct ccttttatag tgtcttgttc
    28921 taagccacct tgacgtttta aaacccacgc tgcaaataat ggagctaaga ttgctgaaac
    28981 taatacagct gcggcaatct gtgcagtcgc agtttgaaca aaaggtgcta atgtagggtc
    29041 tgcttgagca acaatttcag gtgtaataat ggcatttcca gcagtagttc ctgctgcaaa
    29101 cccgattcct gattgattac cacgtcttaa aattgttttg taaccgataa atacaagaaa
    29161 acctgtaaag agagaagcta cgatacctaa aataattcct gttgctcctc cagtaataat
    29221 agattgcaga ttgattcctg ttcctaatgc aaaagcaaag aaaggaatga ctattgcacc
    29281 tgttggtttc attaactctg tccatttagg atctaagtta ccaataacca taccaataat
    29341 aagaggaata acagctgcaa gcattaatga aagaggaata tctgctaatc ctgatacacc
    29401 taaaaatagt aaaacaaaga aaggtccatc attaacagcc gaagcgacat aagctccttt
    29461 atctctataa tcaccatatt tccctgtaaa cgctaaccaa ataccaccat ttgaatttgc
    29521 aacaacagtt agcatagcta ataaagaaac gcccataaca ccatcattac ctacccataa
    29581 tcctaaaatc acaactaaaa gagcgggaat aatagtttta aatagtaata caacaccggt
    29641 atgggcaagt acaggtccag aacttctcac ggtaatttgc atacctgtag cgaaaattaa
    29701 tagtgcaata agtggtcctg ctgatgattt gaataaagcc gtcgtaaatg aacctaaatt
    29761 taaaaattca ggaaagaatg taccaataat agaaccaaga attagcggta ttaccattgc
    29821 accgccagga attttattca taccatcata tatcgggacg atggatttag atgtttgagt
    29881 agacatatta atctccttag tgtgtcgcat atttgatatt tgccattttt gcacccaaat
    29941 agagtgcttc agtcatacta cgactatctg ctgttccttt gcctgctatt gggaaagcag
    30001 ttccgtgatc gacagatgtt cgaataaatg gaagaccgac agtaacgttt acacctgtat
    30061 caaagcctaa taatttgata gggatatgcc cttgatcgtg atacatcaca acaacaatat
    30121 cgaattcatt taggttagct gcacggtgaa ataaagtatc cggagggaca ggccctgtaa
    30181 cattaaaccc tttggcttga gcctcttgaa ttgcgggaac aatttctttt tgatcttcat
    30241 cgccaaacat tccattttca cctgaatgag gatttaaacc agcgactgca atacgaggtt
    30301 ctttaaaccc aagaatgcga gcattttctt ctgctaaatc aataactgta gcaactcgtt
    30361 ctttggtaat taaatcacag gctttacgaa gttggacgtg agtagtaacg tgaataacat
    30421 tgagtttttc actggttagc atcattgagt aatctttagt attactgagg gttgcaagga
    30481 tctctgtatg gccaggaaat ggtttaccac ctgcgtgtag ggcttcttta ttcagtggtg
    30541 ctgtaacaat agcgtggatt tttcctccca ttgctaaatt aactgcctct tcaatatatt
    30601 cataagctgc ttttccagca cgcggatcaa cttgagcaaa aggcaaatct tcaggcaggt
    30661 tattcaaatc taaaatatca ataacgccat attcggctac aaagttatct agattattga
    30721 gaattcttaa tttcaattct gaatgaacaa taggtaaggc tcgttgtata atttttcgat
    30781 caccgatcac aacagggtgt gctaactcat aaatccgttg attagctaat gctttaataa
    30841 taacttctgg tccgataccg gcggcatctc ccatcgtaat tcccaatata ggtttcatat
    30901 ttactccttg attgaaatta atcattttga acgaagtata gcttatatga aatcataaaa
    30961 gtgtgataaa catcacaaaa gtgaactttt ttaatcttat tgatttaatt taatcaattt
    31021 taaggtggta aattggatag ggtatgaaag tgaaaggcat ttattgctag ataaaagctt
    31081 cccttttcaa taaaaaagag tatcatacgc tctcttaaac gtaaccctac atttaagtct
    31141 gtttccaacc tatcccaatt tctttattcc ttaggggcat atagggtaaa aacaaaaaag
    31201 ctgaaacgct ttttttaata agtagcgagt caaatgcccc atggcatcta ttcttttagg
    31261 aatagaaagc ttaggctttc cgcaaggcac ccgacttatt tttttcacct cttgtagaag
    31321 gtttattttc aatgacaatt aaaactccta ttcaagccgt tcttgcttca aaccaatatt
    31381 ttttagatcg ccaagatgca atggaatcaa acgtgcgtag ctacccacgt aaattacctt
    31441 ttgcttacca aaaagcacaa ggcgtttggg taactgatgt tgaaggcaat gaatacctcg
    31501 atttcctagc aggtgcagga acgcttgcat taggtcataa ccaccctaaa ttaatccaag
    31561 cagttaaaga tgtattagac agtggtttac ctttacactc gttagatatt acgactccgt
    31621 taaaagatgc ttttacggaa gaattactct ctttctttcc aaaagataaa tatatcctcc
    31681 aatttactgg cccgtctggt gcagatgcta acgaagcggc aattaaatta gccaaaacct
    31741 acactggtcg tggcaacgta attgctttct ccggtggttt ccacggaatg acccatggtg
    31801 cgttatcgct caccggtaat ttaagtgcga aaaatgcagt acaaggctta atgccgggcg
    31861 tacagtttat gccttatccg cacgaatacc gctgtccgtt tggcattggt ggcgaagccg
    31921 gtgcaaaagc agttgaacat tattttgaga actttattga agatgttgaa agtggtgtgg
    31981 taaaaccggc agcggtgatc cttgaagcca ttcaaggtga aggcggtgtg gttccggctc
    32041 caatcagctt cttacaaaaa gtgcgtgaag tcactcaaaa acacggcatc ttaatgattg
    32101 tggacgaagt tcaagctggt ttctgccgtt cagggaaaat gtttgccttt gaacacgcag
    32161 gcattgagcc ggatatcgta gtaatgtcaa aagcgattgg tggtagctta ccgcttgcgg
    32221 tattagcgat caaaaaagag tttgacgctt ggcaaccggc aggtcatacc ggtacattcc
    32281 gtggtaacca attagcaatg gcaaccggct atgtatcgct taaaattatg cgtgaagaga
    32341 atttagcgaa aaacgcacaa gagcgtggcg aatacttaac taacgcatta cgtgaattaa
    32401 gcaaagaatt accttgtatt ggcaatgtgc gtggtaaagg cttaatgatg ggaattgata
    32461 ttgttgatga acgtcagcca aaagatgcaa caggtgcata cccgcgtgat tgcgatttag
    32521 ccgttgcaat tcaaaaatac tgctttaaaa acaaattgtt attagagcgt ggcggacgtg
    32581 gcggtaatgt ggtgcgtgtt ctttgtgccg tgaatattac ccaagcagaa tgtgaagagt
    32641 ttattaaacg ctttaaacaa tctgttgctg aagcagtgaa agcggtgcgt ggttaatagt
    32701 tagaatggta ggagcgaaac atttttcgcc ctaatgtaaa aaggggcgaa tatttattcg
    32761 cccctacacc aataggatag aaataatgtc aaacctagaa aaacacagac aatccctgtt
    32821 ttgtagcgat ccaaaatcga ttgcggatta tgaatcggca atgaataacg ctgtgaaagc
    32881 ggtttcagac tggctgaaag aagaaaaaat gtacaccggt ggctcaatta aagagttgcg
    32941 tgccaaaatc aacggtttta acccaaccca agctggtgtg ggcgtgcaaa aatcactgga
    33001 gcatttggtg gaaattttct taaagccaag cctcaaagtt caccaccctc attctttggc
    33061 ccacttacat tgcccgacaa tggtaaccag ccaaattgca gaagtgttaa ttaatgccac
    33121 caaccaatca atggactctt gggatcaaag cccggcaggt tcgattatgg aagagcattt
    33181 aattgactgg ctacgtcaaa aagtcggcta tggcaaagga acttcaggag tctttacctc
    33241 aggtggtacg caatcaaacc tgatgggcgt attattggct cgtgactggg cgatagcgaa
    33301 ccattggaaa aaggcagacg gttcagagtg gtcggtgcaa gccgacggta ttcctgccga
    33361 tgcaatgcaa aaagtgaaag tggtttgttc cgaaaacgct cacttctcgg tgcagaaaaa
    33421 tatggcaatg atgggaatgg gtttccaatc ggtagtgact gtaccgtcaa atgccaatgc
    33481 acaaatggac gttgaagctc ttgcgaaaac gttggcggat ttaaaagccg aaggcaaaat
    33541 tgtggcttgt atcgtcgcaa ccgcagggac gaccgatgcc ggtgcgattg atgatttaaa
    33601 agcgatccgt aaattagccg atgaacatca ggcttgggtt cacgttgatg ctgcttgggg
    33661 tggtgcatta ttactgtcga aagatttccg ccacttctta gacggcattg aattaaccga
    33721 ttccattacc cttgatttcc acaagcattt cttccaatca atttcgtgtg gggcattctt
    33781 gctaaaagat gaagcgaatt accgctttat tgattacaag gcagactacc tgaattcaga
    33841 atatgacgaa gaacacggcg tgccgaattt agtgtcaaaa tcattgcaaa ctacccgccg
    33901 ttttgatgcg ttaaaattat ggtttaccgt tgaagccttg ggtgaggagc tatacgcttc
    33961 aatgatcgac cacggggttt atctttctaa agaagtggaa gcctacatta atgccaccga
    34021 tggcttggaa atgttagtgc cggcacaatt tgcctcagtc ttattccgtg tcgtaccaca
    34081 aggttacccg gcagaatttg tggatacctt aaaccaaaat gtggcagatg agttatttgc
    34141 tcgtggcgaa gctaacattg gtgtgaccaa agtcggtgag catcaatcac tgaaaatgac
    34201 tactttaagc ccgattgcaa cgcttgaaaa cgtaagagca ttattagctc aggtgttggc
    34261 agaagcagat cggattaaag attcgattgt aaatggaact tatgttccgc caattgatta
    34321 aactgcgtta aaaataaaaa ggtgttttcg acatttattt gtgttttaat gtttgcattc
    34381 ggtagtcttt atcgaatgca aattttttta acaaggagtt tttatgaaaa aagtcctggg
    34441 tttaacattg atggcaatgg cgttatcggc gtgtaattca actgcttcca acggttcttc
    34501 acaagcaaat acaggtgttg caccggcgaa tgtgattagc gtgaaacagg tgttagcggc
    34561 agcagatgac agctacgtga cggtagaagg cacactctta aacaaagtcg gtgacgaaac
    34621 ttacttattt aaagatgcga cagggcaaat ccgtgttgag attgacgatg aagtatgggc
    34681 aggtcagcac gttggtagcg aaggcaataa agtccgttta tacggagaga ttgacaaagg
    34741 tttcaataaa accgagttag atgttaaaac actcactgtt ctgtagaaga tcaaacctta
    34801 atttggttcc ccgccttgtt tggcggggtt tttacgttaa ttaatcaaac catccttttg
    34861 caaaaaaacg caaaattata ccgcttgttc cttcaatatt gtgctacaag atgctgtgat
    34921 ttgctgcaaa atagcggtgt aatcagtctc ttttaaacca atattaccga aatagtgcat
    34981 ttttacatca cgaatcccac agaactcaaa cagccctttt cccagcgtat gttcaaatgc
    35041 tgctaaaaag ccttttcgtt catatttttc attggaatta ccgagcgtta caaattgttg
    35101 catttttttg ccggtcagca agccgatact ttcaatttcc ccgttacgat aggcaaaatc
    35161 ataacttaac accctgtcta aatagccttt taaaattgcc ggaaagccca tccaccaaag
    35221 cgggtaaatt aacgtaatca catcagcttc aagccaatat tgatgctcaa ttgccacatc
    35281 tgcttcatag tgtttactga gtgtgccttg aaattccgcc cagtctaata tcggcttgaa
    35341 gttgagttgg tagagatctc gtacaaccac cttatttgga acggaagctg ctatcgtttt
    35401 ttccaaaatc gcatggttaa agctggaggg attcgggtgt gcgtaaataa tcaggtgatt
    35461 catagcgttt tcctttactg tgtcgaggca gctactagaa gattttagcg aaactttctt
    35521 tgatgaaaat caatattttg gcgaatatac cggcaaatac cccgtttgag gaatgaacgg
    35581 ttttaagtga acattagata atttagccta ttatagtgat gagtaaaaag gtgttttctt
    35641 gactgattat cctaatcaat cacttcctcg ccgtagcttt ttgcgagggc aatttttaga
    35701 ctcgttaaaa agccaaaaag tcagtcagca agggtatgag ccgattcgtc cgccttgggc
    35761 taatttagca aattttttag aaaaatgcac cgcttgcggt aactgcattc aggcttgcga
    35821 aacccagatt attgtaaaag gtgctgcggg ctaccctgaa attgatttta gccgtggtga
    35881 atgcactttt tgtgaaaaat gtgtgcattc ttgcgaggca gaggtattcc gagcagtttc
    35941 agaacagcct tggagccata aaattgagat tcaagccggc tgtttattaa agctcggaac
    36001 ggaatgccga agctgtggcg atagctgtga gatgagagtg attcgtttcc gcccgagttt
    36061 aggtggcatt gccgaaatgg tattaaattt ggaaagctgt aatggctgtg gggcttgttt
    36121 gagcgtttgt ccgacaagtg cgataaaaat tcagccatta caaacacagg caaacagaga
    36181 tgagtgaaaa attatccgaa caggaaaact ggtatgtgtg cagtctcgtg gtgcaagcaa
    36241 aaccggaaaa attggaagaa gtaaaagccg agattctgaa gattcctcat accgaaattc
    36301 acggtgagaa aacagatgaa ggcaaattgg tcgtgacgat tgaaagcaat gtgcatttag
    36361 ccctttccga tcgaatcgat caagtaagag atattaaagg cgtgattgtg gtgtctttaa
    36421 tttctaatta cattgatgaa cagtgattaa tgattatttt tgaagccaaa cgtgggacat
    36481 agttatggaa ctcaatcgta gagattttat gaaagcgaac gccgctgtgg cagctgctgc
    36541 agccgcagga attatgattc ctgtgaaaaa cgttcaggca gatgacaccg gtattcgttg
    36601 ggataaagcc ccttgtcgtt actgtggtac aggttgtagc gtgctagtcg gtactaaaga
    36661 cggtaaagta gtggcaaccc aaggtgaccc ggatgcagaa gtaaaccgtg gtttaaactg
    36721 tattaaaggt tatttcttat ccaaaatgat gtacggtgca gaccgtatgc aagagccaat
    36781 gttgcgtatg aaagacggta agttcgacaa gaacggcgat ttcacgccgg tttcttggga
    36841 tcaagccttt agcattatgg cggagaagat taaaaccact attaaaaatg acggcccgaa
    36901 tgctgtaggt atgttctcat caggtcaaac aaccattttt gaaggttatg cgaaagtgaa
    36961 actttggaaa ggtggtttcc gttcaaatac gattgacccg aatgcccgcc actgtatggc
    37021 gtccgctgcg gttgccttta tgcgtacctt tggtatggac gagccgatgg gctgctataa
    37081 cgacatcgaa aaaaccgatg cgttcgtgct ttggggttca aatatggcag aaatgcaccc
    37141 gattttatgg tctcgtattt ctgatcgccg tttatcagac aataaagtga aagtggtggt
    37201 aatgtccact tacgaacacc gttcgtttga attagccgat acaccgatta tcttcaaacc
    37261 acactcagat ttagcaattt taaactacat tgcgaactac attatccaaa acgataaagt
    37321 aaattgggat tttgttaaca aacacaccaa atttaaacgg ggtgaaacca atatcggtta
    37381 cggtttacgt cctgaacaca aattacaaca aaataccaat gcgaaaactg ccggtaaaat
    37441 gtatgacagc gattttgaag agtttaagaa aatcgttgcc ccttatacat tagaagaagc
    37501 tcaccgtatt tcaggcgtgc cgaaagatca gcttgaaaca ttagcgaaat tatatgcaga
    37561 tcctaaccaa aaattagtgt cgttctggac gatgggcttt aaccaacata cccgtggtgt
    37621 gtgggtaaac catatgatgt acaacgtcca tttattaacc ggtaagatcg cattagaagg
    37681 ttgtgggccg ttctcactca cgggtcagcc gtccgcttgt ggtactgccc gtgaagtggg
    37741 tacatttatt caccgcttac cggcagatat ggtggtcaca aatccgaaac accgtgagat
    37801 tgtagagaat tcttggaaat taccggctgg agcaattcct gatgtaccgg gctttcacgc
    37861 tacagctcaa agccgtgcct taaaagacgg caaaatgaaa ttcttatggc agatgtgtac
    37921 caacaatatg cagggcggcc cgaatatcaa tgaagagatc ttcccgggct ggcgtaatcc
    37981 tgaaaccttt attgtggttt cagatccgta cccatctgtt tcagcagtgg ctgctgactt
    38041 aattcttcca acctgtatgt gggtggaaaa agaaggggct tacggtaacg cagaacgccg
    38101 tacccaattc tggcgtcagc aagttaaagg gccggcaaat gcccgttcag atacttggca
    38161 gttagtagag ttctctaaat acttcaaagt agaagaagta tggccggaag agttattagc
    38221 taaagcaccg gaattgcgtg gtaaaactct atacgaaatc ctttaccgca acggcaaagt
    38281 agatagctac caagtgccaa ctaacattcc gggctatatg aatgacgaag cagatcactt
    38341 cggttactac attcaaaaag gcttatttga agagtatgcg gaatttggcc gtggtcacgg
    38401 tcacgattta gccgactttg acacctacca caaagtacgt ggcttacgtt ggccggtggt
    38461 aaaagacgag aaaaccggcg aatacaaaga aactttatgg cgttaccgtg aaggctatga
    38521 cccatacgtt aaagccggtg aagaagtggc attctatggc aatgcggaca aaaaagcagt
    38581 gattttaggt gtgccatacg aaccacctgc ggaagcaccg gacgaagaat atgacttatg
    38641 gttctgtacc ggtcgtgtac tagaacattg gcacaccggt acgatgaccc gccgtgtgcc
    38701 ggagttacat aaagcattcc caaccaactt ggtttggatg cacccgaatg atgcgaaaaa
    38761 acgaggctta cgtcacggtg ataaagtgaa agtgatttca cgccgtggtg aatatgtatc
    38821 gaacttagat acccgtggac gtaataaatg tccggaaggt ttgatttact cgactttctt
    38881 cgatgccggt cagttaatca acaaagtgac acttgatgcg actgatccaa tttcatttga
    38941 aaccgacttc aaaaaatgtg cggttaaagt ggtgaaagct taattgtagg ggcaaattat
    39001 ttgcctcaga caagcggtca aatttgcaaa tttttttaca aaaacgaccg cttacctaag
    39061 aggaacccac aatgaaaatg gatccaaatc gtcgccagtt tttaaaaaat gcaacccgta
    39121 ccgcagccgg tgtttgcggt gtaggaatga ttttagggct acagcaacaa caaagttttg
    39181 cccgtcaagg ggtagcacta cgcccaccgg gtgcattgcc ggagcaagat ttcctgagtg
    39241 cttgcacccg ttgcggacaa tgtgtgcagg cttgtcctta cgatatgttg catttggcat
    39301 cgcttatttc accagtggaa gccggcacgc catactttat tgcacgggat aaaccttgcg
    39361 aaatgtgctt ggatattccc tgtatgaatg cttgcccaac cggggcatta agcgaagagc
    39421 taaaagacat tgacgatgca cgaatggggc ttgcggtgtt gctcgaccac gaaacttgtc
    39481 ttaactggca aggcttgcgt tgtgacgtgt gttaccgtgt ttgtccgtta atcgacaaag
    39541 cgattactct tgagaaagtg cataacgacc gtacctcgat tcacgccaaa ctgattccga
    39601 ccgtgcattc tgatgcttgc accggttgcg gtaaatgtga acaggcttgc gtattggaag
    39661 aggcagcgat caaagtgtta ccgatggatt tagccaaagg cttgctcggt cgtcactatc
    39721 gtttaggctg gcaagagaaa caaaatgccg gtaaatcgct gattgaagat gttcacccag
    39781 agggtttacg cccagcttat gatgccagaa tgccggaagg cttacacgag ccggtgtatc
    39841 agcatatgga agtaaaacct gatgtgaaag tggctacgcc aagtcgggcg acacaaaact
    39901 atgtgccgaa ctctacgacg gtggaagctc cggagcattt ccctgattta gacttgaatc
    39961 tcaagggggt gaaataatgg cagccaattc tccaaaaaat gcgggcttag aggctcgtca
    40021 gaaactaggt tggtggcacg cttaccgctt tttgatttta agacgcttaa gccaactcag
    40081 cattattttg atgtttttaa gcggcccact ttggaatgtc tggattttaa aaggaaacta
    40141 cagcggtagc ttattactag ataccgtgcc gatgacagac ccattaatga ccgctgaagt
    40201 gctggcaacc ggctatcgcc ctgaatggac ggtattggtt ggggcgttaa ttatggtggc
    40261 gttttacggc attgtcggca gcaagctgtt ttgtagttgg gtctgcccga tgaatatggt
    40321 aacagatact gctgcttggt taagacgcaa actcggtatt cgccaaactg ctaaaattcc
    40381 acgcaattta cgctatgtga ttttggcggt gattttagtc ggtagtgcga tttccggaac
    40441 actattgtgg gagtggatca acccggttgc ggctctcggt cgggtgtttg tattcggttt
    40501 aggggcaacg ctttggctgg ttttagtggt gttcttgttt gacttattgg tggcagaaca
    40561 tggctggtgt ggtcatcttt gcccgattgg tgcaacgtat gccttaattg gggcgaaaag
    40621 cctgattaaa gtcaaagtgg tagatcgtaa ccgttgcgat aattgtatgg attgttacaa
    40681 cgtttgtccg gaacctcaag tgttgcgtgt gccgctacac ggtaaaccgg aggaaagcac
    40741 ggttatctta tctaaagatt gcattacctg cggacgttgt attgacgttt gtgccgaaaa
    40801 tgtatttgcc ttcggaatgc gttttcaagg cagtattgat gtgaaaaata tttaattttt
    40861 atctttttga aaacaagaat tttaatggag tgaacctcaa atgagaaaat atctcgcctt
    40921 cattttagcc gtgatgtccg gctttgcaat ggcggaagcc cctaagttat ccggatcaat
    40981 tgatgagaca accgaaagtg ttgcaccggg atttcataac ccacaaaaag atgtgggcac
    41041 gattccaacc actttccctt tccaaccacc gcttgttcca catagtattc gtggcttaca
    41101 agtgagcaaa aacgtaaacc attgtttagg ttgccacgct attgaaccat ctaaaaccac
    41161 aggtgcgacc cgtttaccgc caagccattt taccgaccgt gatggcaagg tgtacgaaaa
    41221 cgaatctcct cgtcgttatt tctgtttgca atgccacgtg caacaaactg atgtaaaccc
    41281 gattattcaa aataaatttg aatctgtacg tgaatctcaa gctaaataag gagtaagtaa
    41341 tgttgagaag attttgtaac tggttacgta gcccaagcaa aatggcaatt ggtgctgtaa
    41401 tccttatttc tgcattaggt ggtattttcg cttggagtgg ttttaatgca gggttagcaa
    41461 tgacaaatac tgaagagttt tgttcagatt gccatatgaa cgatgttgtg ccggaatacc
    41521 gtgcctctgc tcactattca aaccgcagcg gtgtgaaagc gatttgttca gattgccacg
    41581 taccgcacga attctttcca aaatggcaac gtaaaatcat agccgcaaaa gaagtttatg
    41641 cacactttac cggtaaagta gataccaaag agaaatttga agctcatcgt ggcgaaatgg
    41701 cagaacgtga atgggcacgt atgaaagcga acagctctca agagtgccgt aactgtcata
    41761 attttgatga tatggacttc actcaacaaa aaaacattgc gcagcaaatg cacgcattgg
    41821 cacaagagca aggtaaaacc tgtattgact gccacaaagg gattgcacac aatctcccac
    41881 atatggaagc gatccagaaa aactttatcc ctgatgattt gctgaaaaaa gcagaagaga
    41941 agaaataact taacgtgttt caatagaaaa ccctcaattt ccattgaggg tttcttttta
    42001 gtagccaagt tagtaaccaa tggcattgac atttggtaaa aaatcgttgg aatttaaccg
    42061 cttgacgacc gtttctatcg tgccgttttc gtgcaattca atttcacgcc agccttgtgg
    42121 ttgtaagtct aaggtaaact ggtcgcaatt cggcttaaat tgaatgcaag tagatggggt
    42181 ggcataaatc ggaataccat gccaaatatc atcaacctgc tgatgaatat gaccatgcac
    42241 aatcgctttt acattcttaa attttgcgaa aatctcggat aattcattgc tgttttttaa
    42301 gctatgctga tccagccacg ctgagtttgt cggcaaaata ttgtggtgca gagcaacacc
    42361 gttgcggata ttgtgccaat ttttcttcta accatttaag ctgtgagtaa gagagttcgc
    42421 cataaggcat acctaccacc tgggtattta gcatcagaag ctgccattgc tcaccgagta
    42481 aaatttgttt atggggaagg atatgtttat attgcgccaa aatttctgac atactcggct
    42541 gaacatcgtg attcccctct agccacacta tcggcgagtt tagcgaatta gttatctgtg
    42601 caaaatagtg ataaccagca atattgttat cttgaatcaa atcacctgtg gcaagaacta
    42661 gatcaaaata ttgcttcgct tgtttgttta tttgctcaat aactgccgaa aaacttttta
    42721 ctgttttgac attaagtaga gtttcctccg gattggagaa aaggtgaggg tcagttattt
    42781 gtaataactt aattacccct gttacgggta acttaatata ttcgtgcatt cgttttgcat
    42841 ccattcaaat tctagtaatt tttaactggt gagattctat cagtaagcta aaagtaaaaa
    42901 tgtggactat gccgcatttt tgaaaaaaag tgagattaat caaaaaaaat ttattatttt
    42961 cgatagctaa gac
//
LOCUS       DANLXO010000008        40027 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.008, whole genome shotgun sequence.
ACCESSION   DANLXO010000008 DANLXO010000000
VERSION     DANLXO010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 40027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40027
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.008"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(55..930)
                     /locus_tag="PXD69_000343"
     CDS             complement(55..930)
                     /locus_tag="PXD69_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6282582.1"
                     /translation="MWIWFTLLAAVAQAGRNAFQKQLSVNVPVLGVTLARFFYAVPLA
                     SGYLYFLYQYDDNLNIPHFPPLFFVYAIGAGLAQILATSLMVQLFHLKNYAIGVGLAK
                     SEAVWAALLGVLFFGVTISGIGWLGVVLGGVAIFLMTGSGNLRQLSWKTLFLGIASGL
                     CFALTSLWVREASLQLNSHYLLSAAWVLFSVISFEAVILVIYLALLQKETLIKFFRFP
                     KLGMLTSLFSFLGSFGWFNAMSLNHVAFVKTLGQVEIFFILGISYFVFKERLKIQDFI
                     GLILVVIAAILVVLG"
     gene            1038..1874
                     /locus_tag="PXD69_000344"
     CDS             1038..1874
                     /locus_tag="PXD69_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDL6282583.1"
                     /translation="MLPHIYIGTGGYADTDLIGTLYPFGTAKEDFLFVYSQHYDTLEI
                     NSTFHAPIGQKAFEGMVQKAEGRLNFSVKLHQDFSHQRTATLDQAQLFLNALAPFTAE
                     GLLANLFVQFPTQFERMPLNRRYLAELCQWFADYPLAIEFRHPSWHIPAVFDTFAKSS
                     NLIWCNVDYPQNIGLPAFHFFANQRTAYLRLHGRNPNWWKGQSAAERHDYRYSDEELK
                     GLAELLFSRRTEFDRLYLYFENTTKSHAFYNIQTLKGFLAEKGFQIKPVPENLLGQQS
                     LF"
     gene            complement(1949..4801)
                     /locus_tag="PXD69_000345"
     CDS             complement(1949..4801)
                     /locus_tag="PXD69_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6282584.1"
                     /translation="MVQAVSFSHFFAIHYFYFFLHKTKGQCTAKPLFSILLFHLFPKN
                     SAKFLLFFYFLVLMVLYSNEVANGKLLITGGTNLNGTLSAEGTSEIILSGRPTPHAYD
                     KVANKEVLIEGDWINRSFNATIFAAKDNGKLEISRNVANINGNFNLTDNATAQIGFTQ
                     GTSQACIRSDRTGVATCNINATLSETDLNSWERTKVAGNVSLADNSTFSLGSKADLTG
                     SITAQESTKVQLNDGSIANLTGLSTTGIFNGANGSTVNLSGVWTTLTNTVVDVLNVAN
                     GSQIHLNTPTATKQNTLTANTLTGNGIFKFVADLTKTASDIVTIKDTASGQFSIEIST
                     NGSAHSAQKIKLFETTNEEDFSLNLANEVRSGEYRYHLLKEGNVYYLNPEKEEEPKIT
                     QKGPSETADPLPEYTGDIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNG
                     NAHLIASELTAQTNAVLGVTTVLDHVIHSEGTQKQNTLTANTLTGNGIFKFVADLTKT
                     ASDIVTIKDTASGQFSIEISTNGSAHSAQKIKLFETTNEEDFSLNLANEVHSGEYRYH
                     LLKEGNVYYLNPEKEEEPKITQKGPSETADPLPEYTGDIEYSEKGPGETADPLPEYTG
                     DIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNGNAHLIASELTAQTNAV
                     LGVTTALDHVIHSEGTQNWKVWSKTDYQTTEHRSAGYGFNQDANVIHLGLEKALDNQV
                     TLGMILSQSKARNNFDHYYSGKGRLTMLSMYAKKTWQNGVFVAIDTGFGKASNRLTYQ
                     ANTVKLDRSVFVTGLSIGKAWESANVNIIPSFSARYHHLSSAGNQLVDAKIETNAVDL
                     LALQAGLSINKTLELNGLQIKPEIGSYFVDASHGKLRTRFNNLQIEQQMGRYFKQEAG
                     ISANYRNINAGIQAGFLTGNTLNKQRYISFKVTYEW"
     gene            complement(4849..5526)
                     /locus_tag="PXD69_000346"
     CDS             complement(4849..5526)
                     /locus_tag="PXD69_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6282585.1"
                     /translation="MNSIIRKEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEG
                     KRGVAFEYHYSSLPISVQQELGFAQTAVKEEPRTLVAAQTADEMERVPFYNVQASAGF
                     GAFNSEVYAPDDYIGLSKRWLDVRGFYLSYLAFITASGDSMYPTISDGDMLLVNRATT
                     QPKDGKIYVFRQGEQLWVKRVQGIMGGIRLISDNKELYSPIDVIFDETLDFEVIGQVV
                     YIGHEMI"
     gene            5740..5958
                     /locus_tag="PXD69_000347"
     CDS             5740..5958
                     /locus_tag="PXD69_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6282586.1"
                     /translation="MARNKRVRDMSNFEIRGELMKIGKSLSQLGIENGLAKTTVRNAL
                     DKPYPKGEQIIAKAIGKTPQEIWPSRYE"
     gene            5968..7938
                     /locus_tag="PXD69_000348"
     CDS             5968..7938
                     /locus_tag="PXD69_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HDL6282587.1"
                     /translation="MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVT
                     YEYHLTSLPIETQQQLRLNAALAVIPQAAELQPKRDDPALIARLNNATDKGRDKAKGK
                     AEACMQLQAFLDQGFSYTQAEAGAATAKNVSQGSLKNWYYKVKGHPVHLWQAILISES
                     GRSKKPQLKAKITEEAWDCFLADYLRPEKPDLRASYRRTQAIAKQYGWQIASLQTFQR
                     RVLAEVPYEVILLKREGANAVAKLVPALQRTVKDILAGEWINGDGYQHNVFVKWHTGE
                     IVRPKTWFWQDVRTRKILGYRTSISENTDSIRHALMDVIFNVGIPKTLTLDNTRAAAN
                     KAMTGGIENRYRFKHTELDPKGIMPILGIDVHFTSILYGEGHGQAKPIERAFGRGGIG
                     EKIDKRPELSGFYTGRNAQETPDNYNGGKDGVDYNTFLKAIAAGIEEYNSQTERHTEM
                     CRGELSFNQVWERDYHPSNVRQASPEQLRLLFLQAETVSIKRNGSFTLKAAGKLYGLT
                     NVYWAESLIGITDKKVVARFDPDDLHGNVYVYNLEGQFLAEAVCREAKGFGDTSASRE
                     QGRLYQKVVKSAKAQAEALELLEAHELASLAPQVDVPEPIEKKVKEVLVKEDFIVDFN
                     TVRKATVVEETEEISIFDEVLLKQEKQLRIVE"
     gene            complement(8118..8606)
                     /locus_tag="PXD69_000349"
     CDS             complement(8118..8606)
                     /locus_tag="PXD69_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282588.1"
                     /translation="MLFRSLTDDEIHQIALDSARATFSGFKLKRANAIVMKNCITLFK
                     LSTINFCLAEYHSSFHHLTSIDDLDGIMPTVKKVAQMLSLQESKALIWLLYLKWLFVM
                     RQRSLQVLLENSADLIQGEVIAQPLPTFVKAVLAFQLETYHGLPEWIPEFDSAEFWQS
                     LS"
     gene            8638..9579
                     /locus_tag="PXD69_000350"
     CDS             8638..9579
                     /locus_tag="PXD69_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6282589.1"
                     /translation="MTLIDQIKQHIAESGSSQGKVAKEAGINAGALSAYLNENYKGNN
                     EELEAKLIAYLERIEAKKREFVEAPSFIETKTANQIFGSLRFAQNTGVLAIIHGASGV
                     GKTQAAREYRKRYANVWLVTASPSRSSLSEVLYEIALELGMNDAPRRKGTLARLIVRK
                     MKGTAGLLIIDEADHLPYEALEELRLLQEEVVNESDIGAGVGLVLIGNDKVYTRMKGG
                     INPAHEYGRLWSRSAKRTSIQKTKKEDTQAVAKAWGLSENQEALKVMQAITETGGGLR
                     ILTHTLRLAAMVAKDRMIPLTADLIQLARKDLLSTGD"
     gene            9582..9896
                     /locus_tag="PXD69_000351"
     CDS             9582..9896
                     /locus_tag="PXD69_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282590.1"
                     /translation="MRTPKPKHSFNRTNQAACRFLKQTQKAIIRLNSLGFTVLNIDFT
                     RIKPRIEVEIGNNKHIAQGLIYEGKAYRYSFGKSEDLGRWEGYYTMLEGIRVWWRQAA
                     IH"
     gene            9908..10144
                     /locus_tag="PXD69_000352"
     CDS             9908..10144
                     /locus_tag="PXD69_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282591.1"
                     /translation="MKTLALLTALLGLVGCDLVQSKQAKNYIGNNLTEICIDNVVYLI
                     YSGDKKGGITPKVNKDFYPYTCTNKEERQNGKTR"
     gene            10128..10421
                     /locus_tag="PXD69_000353"
     CDS             10128..10421
                     /locus_tag="PXD69_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282592.1"
                     /translation="MAKPDETPITKAECQSQLAELGVQYKKLPMAITRHICNATTNIH
                     GKVIKVSVVERVGYGVQITAQGNEKSCLVTYEAMLGMAEAMGLFDEVKEQNND"
     gene            10543..10761
                     /locus_tag="PXD69_000354"
     CDS             10543..10761
                     /locus_tag="PXD69_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL6282593.1"
                     /translation="MNDELAAISASYAQHNRYQHYAEKAAEAERKGNYKEAQDHWEVA
                     KLSAKKTANRDWAEQRAEFCKRMHNKPF"
     gene            10771..10953
                     /locus_tag="PXD69_000355"
     CDS             10771..10953
                     /locus_tag="PXD69_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282594.1"
                     /translation="MTETVKAQLNSQLNEAIIQLIQAQKYLNQDDAIRSGVYIGTVQD
                     LLPKVHLKLLTANRKH"
     gene            10970..11359
                     /locus_tag="PXD69_000356"
     CDS             10970..11359
                     /locus_tag="PXD69_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282595.1"
                     /translation="MAITEEQWKEIKQKLDSIIGRVKFRYKEHLLTVDVVQIKRSLKL
                     AVYVDGEIDGAWTKEGHEIRPYLEEVWYRKERPFFNAKEKKEYRGLMSKKKLNEKIVT
                     YSPMFPSPTALTRQYKKLDGLELIEVI"
     gene            11408..11695
                     /locus_tag="PXD69_000357"
     CDS             11408..11695
                     /locus_tag="PXD69_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282596.1"
                     /translation="MNKNEFFKKYHLEGSLAILDLDANDDQSQFCYQALLEYRELPLD
                     TFLAEYSDDEDMTESEFIELMLDELEWIIRRAKNAKRFVKKRQKTMREEIM"
     gene            11814..12359
                     /locus_tag="PXD69_000358"
     CDS             11814..12359
                     /locus_tag="PXD69_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HDL6282597.1"
                     /translation="MTDKAKLIQLIHIAKSQLAMDDLSYREMLKRLTNKTSSTKCTVV
                     ELHKVLHELQTKGAKVKYFAKRSKKPTAYSPATGETAVKSQIAHKIRAVWITMGKHGF
                     LNDPSEKALNAYMRKVINNKTRPTILLNVSALEAGDASYMLEILKKWHKRVMIKALSK
                     SCTVDPKISYDELVEWYNEVM"
     gene            12346..12879
                     /locus_tag="PXD69_000359"
     CDS             12346..12879
                     /locus_tag="PXD69_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282598.1"
                     /translation="MKLCRCPICHSDIHLEALVEDEAGRELLGKISQLTHGVAQPMVA
                     YLGLFKPQKSNLNNSRALKILNDVLALYPCSLLLAQALSETVVSIRKKRQQAMENGQK
                     IEPLPNHNYLKSVYETQKVHFAVVRTGKTERETMKAELEKTRNAIAYVQRFVDLGREE
                     VVKNSPEYQIWLAHKPK"
     gene            13044..13403
                     /locus_tag="PXD69_000360"
     CDS             13044..13403
                     /locus_tag="PXD69_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6282599.1"
                     /translation="MELVDIFEEKAPEVLTDLAKHIEVALEEKCQFSPEKAKQIGIDI
                     AQQMAQNWGGEVIYIPRNLLMALNERDMKIYEEFNGNNHRELARKYNVSMQWVYKIVK
                     KVHKDEVARRQMSMFEM"
     gene            13539..14048
                     /locus_tag="PXD69_000361"
     CDS             13539..14048
                     /locus_tag="PXD69_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL6282600.1"
                     /translation="MSQNLTFRQIFDRLIGHEGGYVNHPQDPGGETHWGITKRTAVAN
                     GYMYAMKNMTREQAYQIYEKAFWQRYRCAELKPAVAYQFFDAVVNHGFGNASRMLQRA
                     VGVADDGIIGNITLQAINAKSESDLLMLFNAERLKFYTKLRNFPTFGKGWVNRVAGNL
                     EYAAQDNEV"
     gene            14051..14320
                     /locus_tag="PXD69_000362"
     CDS             14051..14320
                     /locus_tag="PXD69_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL6282601.1"
                     /translation="MAKLFKELLSTNGTLSTTSTVQFFGTLCVFGLMVYAVITQQPYA
                     ESLLNNVLIYLFGATTAKGVVTSYQAKIKGGIHKQQSTFKEEEGC"
     gene            14314..14661
                     /locus_tag="PXD69_000363"
     CDS             14314..14661
                     /locus_tag="PXD69_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL6282602.1"
                     /translation="MLMQQILGVIGVIAAILSYALFKSWQLKRERKKNAILQAEKQQQ
                     AVEIEQKKAEVKYVYISKKNNEKVTRSSASDIDDKLQQHGYFRDNNRLHGVQSDLSEP
                     CGYAGNETSDSCS"
     gene            14688..14840
                     /locus_tag="PXD69_000364"
     CDS             14688..14840
                     /locus_tag="PXD69_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282603.1"
                     /translation="MKYIKKLRKRWQIWRFLKNHPEVAQRRDLLAIAIKQGVENPVGR
                     ARRREP"
     gene            14840..15175
                     /locus_tag="PXD69_000365"
     CDS             14840..15175
                     /locus_tag="PXD69_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2730 domain-containing protein"
                     /protein_id="HDL6282604.1"
                     /translation="MDLFTVFWESIRANFGFISALLTIVVTAFWLKLDSKYAKKNDLG
                     ELLEIAKSHDNRLTTLETKVENLPSAVDVEKLKTLVTDVKGDTKATSKQVDSISHQLG
                     LLLEAKLKE"
     gene            15177..15473
                     /locus_tag="PXD69_000366"
     CDS             15177..15473
                     /locus_tag="PXD69_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282605.1"
                     /translation="MSLRDLLTQDQRLVILRSLAEAGYDANESIISDCLDLYGHDISR
                     DLVRTHLSWLEEQGLLTLERLRDGYMVASITQRGLDVAQGRVVVSGVKRPRPKI"
     gene            15496..16068
                     /locus_tag="PXD69_000367"
     CDS             15496..16068
                     /locus_tag="PXD69_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3486 family protein"
                     /protein_id="HDL6282606.1"
                     /translation="MSEKNTRGRASKVDLLPPNIKTQLAMMLRDKQYSQSQILEEIND
                     LIRDCGLPDEMLLSKTGLNRYASRMERLGAKIRNAREVAEIWTKQFGEMPQTDIGKTL
                     MEMVKQIAFETSLKLGEQEGGIEPKQLALLSSAIQRLEQAESLSFKREQAIRKEVAQQ
                     AAETAEKVVVQAGLSAETVRTIKEQILGIA"
     gene            16068..17624
                     /locus_tag="PXD69_000368"
     CDS             16068..17624
                     /locus_tag="PXD69_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDL6282607.1"
                     /translation="MALLNNRPLNELAPECRSFLESIHAFNPNELLLGYQKRWIADDS
                     QLKIAEKTRRCGLTWAEAADNALIASTRKSDGGSDVFYIGSNKEMAREYIDAVAMWAK
                     AFNRVAGEIQEEIFEDEDKDILTYVIYFSSGFKVKALSSNPKNLRGMQGVVVIDEAAF
                     HEYLAEVLKAALALTMWGAKVRIISTHNGSENLFNELITDSRAGRKRYSVHTITIEDA
                     CRDGLYQRICQVVTKKTWSPEAEKEWIENLLNDTASEEDALEEYFCVPKFGSGLWLSR
                     ALIERQMSEATPVIRFTAKDGFSLVAEPTRYAEIAEWCELELEPILATLNPDLLHFMG
                     EDFARSGDMTSLVVLAQQQNLVRKVAFIVELGNMPYKQQEQIVMFMLKRLPHFAGGAF
                     DARGNGGYLAEAARDEFSTLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILA
                     DLRSFQVVKGVPRIPDKRTKSADGKSKRHGDTAISLLLAHYASRQLVQMPVEPVSRRP
                     RHSQQLTEGY"
     gene            17743..19197
                     /locus_tag="PXD69_000369"
     CDS             17743..19197
                     /locus_tag="PXD69_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HDL6282608.1"
                     /translation="MAKKNNLISEIATRARSIDYWAFGYYLPNPDPILKRMGKDISVY
                     RELLSDGQVRSGVRRRKAAIKGLEWRITTTNNEKVDEQIYQIFNRLPMNNLITEMLNA
                     ALYGYHISEVIWAKEGELFVPTEIIGKKPEWFMFDDENLLRFRTKENWADGELLPDDK
                     FLLTTQEATQDNPYGLGDLSLCFWAATFKKGGFKYWLEFTEKYGSPWLIGKHPRQAHN
                     TDKERLADALEGMISSAIAVIPEDSSVEIKDAAGKSASTDAFEKFLNFCKAEINIALL
                     GQNQTTEQESNRASAQVGLEVMEDIRSDDQAMIEATFNTLLQWIVKYNFNVEQLPKFE
                     FYEQEAINTDQVERDSKLHAMGVRFSKAYFEREYGFEAGDIEVQAVEKAEKSANTTEF
                     SEGQRRTQVPMPVPILEQLEHEGEAMVDDWLQGVRDKLAQADSLEDFQSQLDSLIPEL
                     SFAEYGELLALGSTVAELAGRQSVNDEIKAKRNA"
     gene            19190..20467
                     /locus_tag="PXD69_000370"
     CDS             19190..20467
                     /locus_tag="PXD69_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL6282609.1"
                     /translation="MRKFTFKQQAQYFEKKLNLRTNSYLDILGEEHDYFFVVAGANRN
                     EVLSEFRKAVDEAIHNGETLENFRKRFDEVVAKTGWEYNGGRNWRTRIIYDTNVYGAY
                     NRGRLQQHLELAEDMPYWEYQHNDNAHPRPQHVAWDGLVLRYDDPFWKYHYPIKAYGC
                     HCTVQALDDFDLKHDGKTVSPPPEIEFEQKTVGVRTGNSRVVTVPKGVDVGFTPHNFD
                     NLKAGRAANVDKLLMQKMVTADPIFASKAVSDLLAKEPVAKLHNQAFKNWVNDVANAK
                     GSALSQVENMQLLGVLPVAVIERLQQINLAPQSAIIAITKGDMVHALRELKQNTGIAV
                     PLEFWEKLPAKLQYPNAILLEKQQAETTLLFIYDVAQTKIAVKVNYDATLQDRHGAKG
                     RQKVLLNRAVTGSLFQDTTGLKSSKYEVLLGEM"
     gene            complement(20669..21013)
                     /locus_tag="PXD69_000371"
     CDS             complement(20669..21013)
                     /locus_tag="PXD69_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282610.1"
                     /translation="MMVNAEQAIELVYDLLLSRQWLVTKAEKLPLDPLSEKEAVMFLY
                     TLDQQTEASWLQLTPEQRATANGLIMDFIAKCLTSTKQWLVSDNIVPELQAIEIIKHE
                     IFLSHNSLVMPN"
     gene            21077..21541
                     /locus_tag="PXD69_000372"
     CDS             21077..21541
                     /locus_tag="PXD69_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL6282611.1"
                     /translation="MIKITLNNTQAVKSLQQIANQLEQPRRLYGILGETLKKIHTARF
                     KAEQDPDGNNWKPLASSTLALKRKRGKSTKILRQDGYLADKTAYNVTSDNVEFGSQEV
                     YARLHQFGGKAGRGKKVTVPARPWLGVGDKDEQLLLRKAEWHLGQIIGRMGK"
     gene            21776..22891
                     /locus_tag="PXD69_000373"
     CDS             21776..22891
                     /locus_tag="PXD69_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDL6282612.1"
                     /translation="MTQIEIFKAGKRYDANGTLIDITPEMLQQTVAAYNPEFHEAPLV
                     IGHPKSNNPAWGWVKALSLEGDVLKAEVDQLDAEFSEMVASGKFKKVSAAFYLPDSPN
                     NPHKGVLSLRHVGFLGAMPPAVKGLKQVEFAEDDDFVVFSEWGVASLFSRFRDWLVSE
                     FGLEKADKALPPHEIDWLKEEAMRSQISKQVHAEQATPEPIFNEPAQPEGEPEMSAEE
                     KEELERLKAENEQLKAEKAQAEAEKMEAELEAEKAGNAEFCEGLVKQGKLAPVAKAAF
                     VQALNNLSVLKAGREPEFNEGEDVVSQFKSAMSQSPQIIQFGEYATADKANPQEAEAV
                     EYAEGTDPVSIEADQKVRAYMKAHNVGYAAAFNAIYR"
     gene            22922..23848
                     /locus_tag="PXD69_000374"
     CDS             22922..23848
                     /locus_tag="PXD69_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDL6282613.1"
                     /translation="MTTHNLQKLRVQDPVLTELAQGYHNNELVAETLMPTVEIEKEAG
                     KIPTFGRLAFRLPSTVRNLRGSSNRLDPEDIGAIDVALEEHDVEYAIDYREENEAIFS
                     LRQFALNTTQDVIALGREKAVATLALDESRYETDNKVTLSGTSQFSHKDADVFKVFDT
                     AIRAVKRAIGRKPNVCVISGDVWAALKEHPAVVEKLKYSQVAIVTPEVFAKLIGIETV
                     KIGEAVYEESGQLKDIWSKDIVVAYVAPRSTGGKGTVYEPSYGYTVRRQKGLFVDTYK
                     ESGGKIEVVRTTDIHKPHLVGAAAGYLIKAAV"
     gene            23917..24198
                     /locus_tag="PXD69_000375"
     CDS             23917..24198
                     /locus_tag="PXD69_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282614.1"
                     /translation="MAKFIVLHTPILHDGKRYEVGAEIELTAEQAENNAINLKAVEAV
                     PKPPKNASKPEDEPKPEGEPKPEDAVTEDDVKLAEAKIAEAEQPKGNKK"
     gene            24198..24632
                     /locus_tag="PXD69_000376"
     CDS             24198..24632
                     /locus_tag="PXD69_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL6282615.1"
                     /translation="MYVQIDELLTAFSRKIVVQLSNDEPTATEPDLKMLETAVKVANE
                     RIDAALRSRYTLPLADVPTLINQHALTLARYWLYARRPETKMPDTVKETYQQAVKELE
                     QIATGKLHLGIAESSQILEDDVLADNSEYEVRANARIDTSRY"
     gene            24638..25135
                     /locus_tag="PXD69_000377"
     CDS             24638..25135
                     /locus_tag="PXD69_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gp37 family protein"
                     /protein_id="HDL6282616.1"
                     /translation="MSATQPILEDICQHLRQALPEWEVELFPNDPSTYHLSHINGAVL
                     ISYLASKFEKPRTTQAVLQVRHVQIALTVLTRDLHNDVGALDLLDKLRLLVVGFKPQN
                     CGECWLIDEFFNGSSEETGLWQYQLILQTETQQVQHQAVENLPKFVTAHLRRQDQPGS
                     PGLKT"
     gene            25220..26605
                     /locus_tag="PXD69_000378"
     CDS             25220..26605
                     /locus_tag="PXD69_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HDL6282617.1"
                     /translation="MTFHHGSETERVNGGSVPVSVVDSAIIGIVGTAPIGAVNELTVC
                     LTKKDFAKFGTILNQGFTLPDAFDILARYAAGKVYVVNVLDPSRHRTTVTDEVLTLDR
                     NTLTAQTAKTGIIAVTRVKDGANVLNADRYSVDLQTGVVTFVSAPSAPKISYIYADPS
                     KVTEEDIKGGVDSLTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCAAALATLAD
                     QLHAKAYIQLPKGTSLSKAIQGRGPAGTINASASNENVRHFFPYALGSSNTLESLATH
                     AAGLRMLIDVEKGYWFSTSNKELKGVIGLEIPLTARVDDKQSETNLLNAVGITTIFNS
                     FGTGFRLWGNRSSNFPTVTHISNFEVASRTGDIIDESIRQAELQFIDLPIDDALLDSF
                     LETIDTFLRTQKSLVGYSVSLDYEYDLVDAFSRGQVPIVYEYTPKIPGERISNKSVMT
                     RKYLANLVSQR"
     gene            26616..27131
                     /locus_tag="PXD69_000379"
     CDS             26616..27131
                     /locus_tag="PXD69_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL6282618.1"
                     /translation="MSIAINQIVNGNVYINGNSQMGRVNEVKIPDIEFEFIEHKGLGM
                     HGVIKLPAGTNAIEAEITWDSFYPEVRAVMLNPYKYTQLQIRSNLQVFNSQGLAAEEP
                     MVTIMNVSAGKIGGTGHKNKENAEFADTLNVHSIKQTVAGRELLFIDVLANIYRVNGV
                     DVLQKFRTNIG"
     gene            27227..27541
                     /locus_tag="PXD69_000380"
     CDS             27227..27541
                     /locus_tag="PXD69_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL6282619.1"
                     /translation="MANAAQQVLTNLRVQTTYKLQYPIALPDGRVIETLDVRRPKGKD
                     FRLLDEKGFDPEKDGVKILRFYIQQLTTLVPEDIDELDAADIKGLNNLLEDMLIEGKS
                     DK"
     gene            27538..27690
                     /locus_tag="PXD69_000381"
     CDS             27538..27690
                     /locus_tag="PXD69_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005658873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL6282620.1"
                     /translation="MSELDTVYADLAWWFKFSPSELLELDLVDIPKWVEQMNRQIKAG
                     YGQILR"
     gene            complement(27669..27972)
                     /locus_tag="PXD69_000382"
                     /pseudo
     CDS             complement(27669..27972)
                     /locus_tag="PXD69_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249646.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            28020..30677
                     /locus_tag="PXD69_000383"
     CDS             28020..30677
                     /locus_tag="PXD69_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6282621.1"
                     /translation="MANNLAIGMVIGASLSSGFHGAFSGAKKKLEQLEQAVAKNQQSH
                     SKLGSELTALRSKQATLYAEMSRASSKGGAGLALMQQEYKKIGKEIANISREQRKWST
                     ELEKSIAKQTKLRNAMERHTQAKENRDELKGKIIGTVASAAMGVGVMKTYMEQEEAAN
                     NLKISMLKADGSFGKFEEIGKIADTLGTDLPGTKKDFYKLAMALKKQGVSDDVLTGGA
                     LKTSAELNVLLDMDQESGGEFLAKFMESHRLNENELPQAADYLQRAMFAGGLSKEQMY
                     ESMKYYAPKLNSMKLTGAENTEKVLAIEAMAGQQGLEGSTFGTGLNMMLSRMNKGPEM
                     LKAAAKGMKAEAREMMEAVGVEFNFWDKNGSFKGIDGMLAEMTKFEKIRKKFGDKGVG
                     LVAEELFGIEGGRLADILAMKGQKGLDEMLSKMREQASLQDRINLKTNTLGAALESLG
                     GAWETFVGDIGSVFAEDIKGFSKGLQSAVEWLVPFVSKHKEAIKFVGGLVAGLVILRG
                     VLQAGSFVIQTVTMAMNALKIAAMTNPIVLVIGAIAAGAYLIYSHWDSIAPWFANLWQ
                     NVTAYFNQFWTWVKGVWSGVTDWVSSVWNGVATFFGQLWTTITSLFSVAWTNIQTIWG
                     GATAWFSGLWDGIKSAAFGMFDSISQKVSSVVASIKSFLGFGDDVDKMGAKIGNVATQ
                     VISKEHSGQLSKTADMAANTGFSSGGFTGQGGKYTPAGIVHKGEYVMTKEATSRLGVG
                     MLDSLNYGGAMGFTQPVLQPILGKQKGFFGSLWDDVKFGANFVGNLLGLNQGSLKTPD
                     FNPNATNASGQNSSIFSNYEPLNRNAVTQQESSQAPQIVVNFNPTINVNGNATQEAQS
                     QIMQQLQMSAYEFEKLLNRVLDQRSRRAY"
     gene            30687..31610
                     /locus_tag="PXD69_000384"
     CDS             30687..31610
                     /locus_tag="PXD69_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6282622.1"
                     /translation="MYFMLGNIAFEPVNLTEFSEQHTAEFAEHAVLKGKPRLQAMGEK
                     LNELNFSLRLHHTIGGVESRYQALLEAKAKQAALALIWGSRYKGDYVIVDISSTTLFT
                     DGRGNALAREMQISLKEFVGDNDGGVLGEALNFGGGSLLGSILPSGAVTTLSQIKTAV
                     SRGVELYNSGKRLVDEVQNTVAIIRQLKNDPATALAYLPAALANLDGALGHFGNLTGS
                     SATLGGLQEKLPAAVVFSEEIGEIYQSLQTMRSSLGNASANSWDNWFTPAESALTEVT
                     DSFDHLAKPVAKMTAWIVLRTDEEAENDTVA"
     gene            31594..31821
                     /locus_tag="PXD69_000385"
     CDS             31594..31821
                     /locus_tag="PXD69_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL6282623.1"
                     /translation="MTQLLKHIVKQGERWDNLSYQYYGNAFEYGRIIDANPHIGFCEV
                     LPIGVTIYIPVLNVKPTNNENMPPWLRGRDA"
     gene            31814..32878
                     /locus_tag="PXD69_000386"
     CDS             31814..32878
                     /locus_tag="PXD69_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282624.1"
                     /translation="MRNVPKPDFSLFYEKTNITAEIEPHLVQLTYIDHLEGQSDELTV
                     EFEDIQGKWIRQWFPTQGDKLKAAIGYQGEFLTDIGEFEIDEVEYSYKPSTINLKALS
                     TGISKANRTLKPKAYENTTLAQVVAKVADNLKLKVVGKIKAIPIKRITQYQERDVEFL
                     ARLAREYHHSFKIVGNQLVFTDKSELGQSEPVLMLEERDTISLRLRDRIKDTAKAVEI
                     SGYDTSGKKVVKKRKKAKALRPNIKQAKSASEDTLKIITRGESQEQIDARGEAALATQ
                     NEDQAAGDIELIGNPKLVAGATILLRNFGVFSGKYLIKSSRHTISRSGGYTTHIEVRM
                     LEFIADDLITLGMEAGNANA"
     gene            32865..33401
                     /locus_tag="PXD69_000387"
     CDS             32865..33401
                     /locus_tag="PXD69_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL6282625.1"
                     /translation="MQTHNFGATYQEGIVSAVDPKTHKVRCKIPALEDLETAWLSFLT
                     PNAGGNQFYCLPDVGELVAMLLDAQGEGGCVFGAIYNEQDPTPVADSDMWVKKFSNGT
                     EISHNRKTGDVVVKTNGHLTATAQGGATINANTVVNGTLHATGKITSDEEVSAPVVKQ
                     GTVELGTHKHGGSPEPNK"
     gene            33456..33818
                     /locus_tag="PXD69_000388"
     CDS             33456..33818
                     /locus_tag="PXD69_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL6282626.1"
                     /translation="MNRQTSIQLTHWQLAPSTDTVEVVQGIDDIHLCIVNILSTQKGT
                     DILRPEFGSDHFRYIDYPEDVAIPNFVREITTALQKWEKRIEVEEVLVDGSAPHFIFT
                     VMWHLTDDVYREIYRTTV"
     gene            33828..34931
                     /locus_tag="PXD69_000389"
     CDS             33828..34931
                     /locus_tag="PXD69_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL6282627.1"
                     /translation="MTEAIKIIDDDVKTVLAEAIADYEKRTGKILQPAHIERSIIQTY
                     AYREQLLRKGINHAFLQTFPQFATGIALDLCGETFGCYRLRDKPARTLLRFSVSGEHT
                     AIVIPKGTQVAINDELYFSTLNDDVITPLITYVEIDAECNQVGVIGNGWESGRVSKLK
                     TALATNYKVTVENIDITSGGLMQEEDEPYRKRILAAPEAFSNCGSIAAYDYHVRSVSQ
                     DIADVNISTPRGGLVRIAVLTQKGLPDTRLLDDIKKHVSAERLRPLCDMVEVIKPTER
                     RYQITARLILLDGYREDLVKAKAREALQLYLSDKTKKLGLDIVPSAIISALRVEGVYD
                     VNLIQPVKTIINETEWANCTAISVEVEEERRDG"
     gene            34924..35490
                     /locus_tag="PXD69_000390"
     CDS             34924..35490
                     /locus_tag="PXD69_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6282628.1"
                     /translation="MASLHYADIIVRDPKYKALADLSKRLNLLDTSQIMTTLVDLLGD
                     ECIPLLAEKWSVTGYDGLLVADSENSKRALIKRAIELHQLKGTPWSIREVLRRLGFGE
                     VEIDEGLKNRLYESTYVSGIPENERWAHYAIRLSNPITNEQARNIRKVLRNFAPARCS
                     LAVLDYKADPIRYNNKATYNGTYNHGSS"
     gene            35500..37779
                     /locus_tag="PXD69_000391"
     CDS             35500..37779
                     /locus_tag="PXD69_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDL6282629.1"
                     /translation="MAGVQETAQWENHVYRIEENDPVHGGENGVTNKPIKHLANRTLY
                     LRRLLTEAGQRINPKKITATSKNSNDLTGHTHEIDHASLTQKGIVQLNASIQSTSTTE
                     SATPSAVKAAYDKAATAEQKATLANEKVEAIKVGGRNLLIQSNTPHNGNAYSVRYALA
                     EAPKVGEEIVVTLWGELGSQRTGIGVYNSQGATELAKLVKIRDGVYQGKGIWRKPMSE
                     GRERTPNDTHLNVYFYPKTATDNNRIERIQLERGSIGTDWTPNEADLKAEISAIRTKL
                     IPVRGGNVATTLNAAKRSDWFREMQIPYQSGWGYYTQAFHNSGTQHNYSNLPLTGRYY
                     FIAELYHNSGYSHLRITYPSLKRTFESAINLNNEDLILDWREVVFLKDGLYQGTFKTT
                     GTLESAYRLRAARDDERYQPYLQMVDMGYDLANPPVGKNKIIGSVDYYVKNGTSESSK
                     ATMMAAAMPDKNVFWEVALWNAAQQRNVLFKGYSKTNNLSIGKTTDNERDRVQVNGTI
                     QATAPADNANNDQVPTTAWVRKMAKILADGKVSKAGDTMTGHLFIKNGEYSAVHTYNT
                     SGWFAKWEAAPLSDSHFAAIVYANDRETVINRVLIPKKNGTVALINDIADTVRAAVSR
                     SDKSRSRTFPLQTGKKYTTTGSVTIYPDGRIVQIFHLKNIKAAWFDYEASAVGDRHRV
                     VNIPLWTAMPNKIFDVDVKTVRPSNNASTYYIEAAEWLSAWQIYGNDTNKSSVNINLS
                     RFRGGKDEDMDLYVTVEGY"
     gene            37780..38382
                     /locus_tag="PXD69_000392"
     CDS             37780..38382
                     /locus_tag="PXD69_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282630.1"
                     /translation="MAYFVNVIDEQGNYELIDDEFIGLYPDLDFNTLPKLTDKQYQTY
                     LAKANGKERFVNGEFVYEQIKVDMQAVISAEKSAKLAEINQKAQAFINDLAKYNETPK
                     FERDTWLEQAKEAKAWVADPTVQTPTLELIAQMRGIPLDTLRQKAYEKAMAYQTVAAI
                     VAGQRQGYEDRLEQAETLEQIQAIEPMYQLPQGANNEQTD"
     gene            38366..38641
                     /locus_tag="PXD69_000393"
     CDS             38366..38641
                     /locus_tag="PXD69_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282631.1"
                     /translation="MSKLTKLKSWSYHVLIAIDQLFNALTGGAADETFSSRCYRGAVL
                     AENPKKRWRFWHSFLNCLFLDPKHCYAAYKAEVHRKQYPKAFRLGGI"
     gene            38641..38928
                     /locus_tag="PXD69_000394"
     CDS             38641..38928
                     /locus_tag="PXD69_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282632.1"
                     /translation="MKKQNLKLVRGDDVSFRFSIKDSTGQPLALKDLWFDLHLVSYQG
                     EVLIALSTDDGSIETAEAGQMVLHFSHQQTARAEWTSANYDLQLTHDYTRV"
     gene            38938..39102
                     /locus_tag="PXD69_000395"
     CDS             38938..39102
                     /locus_tag="PXD69_000395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282633.1"
                     /translation="MTSIIELDLTDDLIIEVQLDSTIITGDSFLANLPDLLQIYNQAK
                     SDSSKELNND"
     gene            39095..39799
                     /locus_tag="PXD69_000396"
     CDS             39095..39799
                     /locus_tag="PXD69_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282634.1"
                     /translation="MTKHKNHENHPIAITFYQLGKDVGDINRRLAVIEQREQSAQPSQ
                     PQAEAVTMPQQDAVAINNINAVLEAVEKYKTFEKYNTQWQERFEKFLSRNPNDYELSE
                     EQRQKLYHTMCQHLWQVNFTEINSKQYELPIPQQFQGKFGYIVKTSGGSTEISFELLS
                     ETHSTYLYPDSYIPEGGGDVMLKPAYIYLVIPDLVAMREPEVVGVSPLKLNILQKHLL
                     TPQKLQEQKPLNTKAN"
BASE COUNT        12451 a         8070 c         9222 g        10284 t
ORIGIN      
        1 tgcgtgggct tacgcccacc ctacaaagct agataaaaaa cgtaaaaatc cgatctagcc
       61 cagcaccacc aagattgcgg caatcactac taaaatcagc cctataaaat cttgaatttt
      121 aagccgttct ttaaacacaa aataggaaat accgagaata aagaaaattt ccacttgtcc
      181 aagcgttttt acaaaggcaa cgtggttcag gctcattgca ttgaaccaac cgaatgagcc
      241 gagaaatgaa aacaggctgg tcaacatacc taattttgga aaacgaaaga atttaatcag
      301 tgtctctttt tggagaagag ctaggtatat aaccaatatc actgcctcaa agctaatcac
      361 gctaaaaagt acccacgccg ctgaaagcaa atagtggctg ttgagttgca ggcttgcctc
      421 tcgcacccaa agtgatgtga gggcgaaaca taaaccgctg gctatgccga gaaagagtgt
      481 tttccacgaa agttggcgta gattaccgct gccggtcatt aagaaaatcg ccactccacc
      541 tagtaccacg ccaagccagc caatgccact gatggttaca ccaaaaaata acacgcccag
      601 taaagccgcc catactgcct cgcttttcgc cagcccgaca cctattgcat aattttttaa
      661 gtgaaaaagt tgcaccatta gcgaagttgc cagaatttga gccaacccag ccccgatagc
      721 atatacaaaa aacagcggtg gaaaatgggg aatgttgagg ttatcgtcat attggtataa
      781 aaaatagaga taaccgcttg ccaacggcac agcatagaaa aagcgggcga gcgttacccc
      841 caatacaggc acattgacgc ttaattgctt ttgaaaggca ttgcgaccgg cttgagccac
      901 ggctgccagc agagtaaacc aaatccacat aatgatgatg aaataagaaa agatagccaa
      961 atcttactct tttattctca gtttgcaagc ggttaaaaaa ccattaaaat ttgcaaaaaa
     1021 ttgaaagaat aaacacaatg ctccctcata tttatattgg caccggcggc tatgccgaca
     1081 cagatttaat cggcacgctt tacccattcg gcactgcaaa agaggatttt ctctttgtct
     1141 atagccaaca ttacgacacg ctggaaatta acagcacatt ccacgccccc atcgggcaga
     1201 aagcctttga aggaatggtg cagaaagcgg aaggtcggct gaatttttcg gtgaaactgc
     1261 atcaagattt cagccatcaa cgcacggcga ctttagatca agcacaatta tttcttaatg
     1321 cgttagctcc gttcaccgct gaagggttat tggcaaattt atttgttcag ttcccaactc
     1381 aatttgaacg tatgccactt aaccgccgtt accttgccga gttgtgccaa tggtttgcgg
     1441 attatccgtt agcgattgaa tttcgccacc caagctggca tattccggcg gtgtttgata
     1501 cctttgcgaa aagctctaat ctgatttggt gtaatgtgga ttacccacaa aatatcggct
     1561 taccggcatt tcactttttt gccaaccaac gtactgctta tttacgctta catggtcgta
     1621 acccgaattg gtggaaaggg cagagtgcgg cagaacgcca cgattaccgc tattcagacg
     1681 aggaattaaa aggcttggca gaattgcttt ttagccgcag aacggaattt gacaggctct
     1741 atctctactt tgaaaacacc actaaaagcc acgcctttta taatattcaa accctaaaag
     1801 gctttttggc ggaaaaagga tttcaaatca aacctgtgcc ggagaatttg cttgggcagc
     1861 agagtttgtt ttgatgggta atttacattg ttgaggagta aataaagggc catgccattt
     1921 agtaatggat agcccttaat ctcaatattt accattcata tgtaactttg aacgagatat
     1981 aacgctgttt atttagcgta ttccccgtta agaaacctgc ctgaattcct gcgtttatat
     2041 tgcgataatt agcggatata cctgcttctt gtttaaaata acgccccatt tgctgctcta
     2101 tttgtaaatt attgaaacgt gttcttaatt tcccatggct tgcatcaaca aaatagctac
     2161 ctatttccgg ttttatttgc aggccattta gttcaagcgt tttattaatt gacagaccag
     2221 cttgaagagc gagaagatca acagcgtttg tttcgatttt tgcatctaca agttgattac
     2281 ctgctgaaga taaatgatga taacgggcgc taaatgatgg gattatattc acgtttgcag
     2341 attcccatgc tttaccgata ctaagccctg ttacaaatac tgaacgatct aattttactg
     2401 tatttgcttg ataagttaag cgattgcttg ctttcccaaa accggtatct atcgcaacaa
     2461 aaacaccatt ttgccatgtt ttcttcgcat acattgatag cattgttaag cgacctttac
     2521 cgctataata atggtcaaaa ttatttctcg cttttgattg agataatatc ataccaagtg
     2581 tgacctgatt atctaaggct ttctctaatc ctagatggat aacgttcgca tcttggttaa
     2641 atccatatcc ggcagagcga tgctctgtcg tttgataatc tgttttagac catactttcc
     2701 aattttgggt cccttccgaa tgaattacat gatctaatgc tgtagttaca cctaatacag
     2761 cattagtttg cgcagttaac tcggatgcga tcaaatgtgc atttccattg tatttaggta
     2821 atggctcagc ggtttcaccc gatccttttt ctgaatgctc aatgtctcct gtgtattcag
     2881 gtaacggatc agcagtttca cccggccctt tttccgaatg ctcaatgtct cctgtgtatt
     2941 caggtaacgg atcagcagtt tcacccggcc ctttttcaga atactcaata tccccggtgt
     3001 attcaggtaa tgggtcagcg gtttcacttg gccctttttg agtaatttta ggttcttcct
     3061 ctttctctgg attgaggtaa tacacattcc cttctttgag taaatggtag cgatattcgc
     3121 ctgagtgcac ttcatttgct aaattaagag aaaagtcttc ttcatttgtt gtttcaaata
     3181 atttaatctt ttgggctgaa tgggcgctac catttgtgct aatttctatc gaaaattgac
     3241 cgcttgcggt gtctttaatt gtgactatat cgctcgctgt tttcgtcaga tcagcgacaa
     3301 atttaaatat gccgttccct gtgagggtat tagcggtaag cgtattctgt ttttgggtcc
     3361 cttccgaatg aattacatga tctaatactg tagttacacc taatacagca ttagtttgcg
     3421 cagttaactc ggatgcgatc aaatgtgcat ttccattgta tttaggtaat ggctcagcgg
     3481 tttcacccga tcctttttct gaatgctcaa tgtcgcctgt gtattcaggt aacggatcag
     3541 cagtttcacc cggccctttt tcagaatgct caatatcccc ggtgtattca ggtaatgggt
     3601 cagcggtttc acttggccct ttttgagtaa ttttaggttc ttcctctttc tctggattga
     3661 ggtaatacac attcccttct ttgagtaaat ggtagcgata ttcgcctgag cgcacttcat
     3721 ttgctaaatt aagagaaaag tcttcttcat ttgttgtttc aaataattta atcttttggg
     3781 ctgaatgggc gctaccattt gtgctaattt ctatcgaaaa ttgaccgctt gcggtgtctt
     3841 taattgtgac tatatcgctc gctgttttcg tcagatcagc gacaaattta aagatgccgt
     3901 tccctgtgag ggtattagcg gtaagcgtat tctgttttgt tgcagttgga gtgtttaaat
     3961 ggatttggct accatttgcg acattcaaga catctacaac agtgttggtt aaggttgtcc
     4021 ataccccaga aagattaacg gttgaaccat tggcgccatt aaatattcct gttgtactca
     4081 agccggttaa attagcaata cttccatcat taagttgaac cttagtggac tcctgagctg
     4141 taattgagcc agttaagtct gctttactgc ctaacgaaaa tgttgaattg tcagctaaag
     4201 agacattgcc agccactttg gttctctccc agctgtttaa atcagtctct gataaagtag
     4261 cgttaatatt acaggttgct acgcctgtgc ggtcagagcg aatacatgct tgtgaggtac
     4321 cttgggtaaa accaatttga gcggtagcat tatctgttaa attaaaatta ccgttaatat
     4381 tggcaacatt acggctgatt tcaagcttgc cattgtcttt agctgcaaag attgttgcgt
     4441 tgaacgatcg gttgatccag tcgccttcaa tcaggacttc tttattcgct actttatcat
     4501 aggcatgagg tgttggacgg cccgataaaa tgatttcgct tgtaccttct gcagaaagcg
     4561 taccgttgag gttcgttccc ccagtgataa gcaatttgcc gtttgctact tcattactgt
     4621 atagaaccat taaaactaag aaataaaaga ataataggaa tttggcggaa tttttcggga
     4681 ataagtgaaa cagaagtatt gaaaacaggg gctttgcggt gcattgcccc tttgttttat
     4741 gtagaaaaaa gtaaaaataa tgaattgcga aaaaatggct aaaactaacc gcttgtacca
     4801 ttaaaacaac gaaaaagtaa aaatgattta agtagcttta aatggcgttt aaatcatctc
     4861 gtgtccaatg tacacaacct gcccgataac ctcaaaatct aacgtttcat caaaaatcac
     4921 atcaataggg ctgtatagct ctttattatc gctgattaag cgaataccgc ccataatgcc
     4981 ttgcacacgt ttaacccaaa gctgctcgcc ttggcggaac acataaattt taccgtcttt
     5041 aggctgggtg gtggctcggt ttaccaatag catatcgcca tcactgatgg ttgggtacat
     5101 tgaatcacct gaagcggtaa taaatgcaag atagctcaaa tagaagccac gcacatctag
     5161 ccatcgttta cttagcccaa tatagtcatc aggggcatac acctcgctat tgaaagcacc
     5221 aaagcctgct gaagcctgta cattataaaa cggcacacgt tccatttcat ctgcagtttg
     5281 ggctgccact aatgttctag gctcttcttt tactgccgtt tgagcaaagc ctaactcttg
     5341 ctgcacgctt attgggagag agctgtagtg gtattcaaaa gcaacccccc tttttccctc
     5401 tatttgtctt ttgagccaat tatttttggt agctcttctt gttacatttg atggttgttc
     5461 aggtaaattt cccattccag ctacttcaga tgccgtaaac cattcctttc taattataga
     5521 attcataaaa ccccttttga attcaagtgg aattcaaaaa aatttacaaa caaattctct
     5581 tgaaaatcaa ttagttaatt aaataaaacc gaaaaacact aaattctttt gaattctctt
     5641 attgaattca tttggaattc actatattat tcgttctgta gttaaatgat ttacatcatt
     5701 taagtagttt ctaaaactaa ctttcaagga tctcacaaaa tggcaagaaa taaaagagtt
     5761 cgagatatga gtaatttcga aattcgtggt gagctgatga aaatcggtaa gtccttatct
     5821 cagttaggta ttgagaatgg attagcaaaa accacagttc gtaatgcgtt agataagcca
     5881 tatcccaaag gggagcaaat tattgcaaaa gcgattggta aaacaccgca ggaaatttgg
     5941 ccctctcgtt acgaataagg agcttttatg aaggaatggt ttttagccaa agaaatcgca
     6001 ggattatctg gagttccaga attaccgaat agcgtttcaa gattggcaac caaagaagga
     6061 tggcaaaaac gacaaattca aggtgtaaga ggtgttactt acgaatacca cctcaccagc
     6121 ctacccattg aaacccaaca acaacttaga ctaaacgccg cccttgcggt aataccgcaa
     6181 gcggcagaac tacaacccaa acgagacgac cccgcactta tcgcaaggct caataatgcc
     6241 accgataaag gcagggataa agcaaaaggc aaggcagaag cctgtatgca gttgcaagcc
     6301 tttctcgacc aagggtttag ttatacgcag gcagaagcgg gagcggcaac cgctaaaaat
     6361 gtgtcgcaag gttctttaaa aaattggtac tacaaagtga aaggtcaccc cgtccattta
     6421 tggcaggcga tcttaatttc cgaaagcggt aggagtaaaa agccgcagct gaaagccaag
     6481 attactgaag aagcgtggga ctgctttttg gcggattacc tccgccctga aaagccggat
     6541 ttacgggcaa gttaccgccg aacccaagcc atcgccaagc aatacggctg gcaaatagca
     6601 agtttacaga ctttccaacg ccgagtgttg gcggaagtgc cttacgaggt gattttgctc
     6661 aaacgggaag gagcaaatgc ggttgccaag ttagtgccgg cactacaacg cacggtgaaa
     6721 gatattctcg caggagaatg gattaacggc gatggctatc aacacaatgt gtttgtgaaa
     6781 tggcacaccg gcgagattgt ccgccctaaa acgtggtttt ggcaagatgt tcgcacccgc
     6841 aagattttag gttatcgaac atcgatttcg gagaatactg acagcatacg ccacgcatta
     6901 atggatgtga tttttaacgt aggcataccg aaaacgctca cgctggataa cacccgagca
     6961 gcagcgaata aggcaatgac cggtggtatt gaaaaccgct accgctttaa acataccgag
     7021 ttagacccga aaggcattat gccgatttta gggattgatg tgcattttac ctcaattctt
     7081 tatggtgaag gacacgggca agccaagccg attgaacgtg ctttcgggcg aggcggaatt
     7141 ggcgagaaaa tagataaacg ccctgaatta agtggtttct atacgggcag aaatgcacaa
     7201 gaaacccctg ataactataa cggcggtaaa gacggtgtgg attacaacac attcttgaaa
     7261 gccatagcag cagggataga agagtacaac tctcaaaccg aacgccatac cgaaatgtgc
     7321 cgaggagaat tgagttttaa ccaagtttgg gagcgggatt accacccaag caacgtaaga
     7381 caagccagcc ctgaacagtt gcggttactg ttcttacagg cagaaacggt cagcattaaa
     7441 cgcaacggca gttttacgct gaaagcagcc ggcaaacttt acggcttaac taacgtttac
     7501 tgggcagaaa gcctgatagg gataacggat aagaaagtag tggcacggtt cgaccccgat
     7561 gacttacacg gcaacgtgta tgtgtacaac ctagaggggc aattcttagc cgaagcggtt
     7621 tgccgagagg cgaaaggatt tggtgatacc agtgcaagcc gtgagcaagg tcgcttatat
     7681 cagaaagtag tgaaaagtgc caaagctcaa gccgaagccc ttgaattact ggaagctcac
     7741 gaactggcaa gcctcgcccc acaagtggac gtgcctgagc cgatagagaa gaaggtaaaa
     7801 gaggtgctgg tgaaagaaga ttttatcgtg gatttcaaca ctgtgcgtaa agcaacggtg
     7861 gtggaagaaa ccgaagagat cagtattttt gatgaagtgt tactgaaaca agagaaacaa
     7921 cttcgcatag tggaataact agcggtcagt ttttgcaaaa aatttgcaaa tttttctaaa
     7981 aaaacgaccg cttgaaatga gatttaaaca gggtttaaac gcctttaagg agtaaaaaat
     8041 gacattaaca gggcaagctt accgagtgat tttcaaggaa ctcaaagagc aacaagagag
     8101 tgaatttgaa caggctttca agaaagggat tgccaaaatt cagcagaatc aaactcagga
     8161 atccattctg gtaaaccgtg atatgtttca agctgaaaag ctaacactgc tttcacaaaa
     8221 gttggaagcg gttgagcaat tacttcgcct tgaattaaat cagccgaatt ttcaagcaaa
     8281 acttgaagac tacgctgacg cattacgaac aaccatttta agtaaagtag ccaaataaga
     8341 gctttagact cttgaaggct taacatctga gccacttttt ttactgtcgg cattataccg
     8401 tcaagatcat caatagaagt taaatgatga aaagaggaat ggtattcagc taaacaaaaa
     8461 ttgattgtac taagtttaaa caaagtaatg caatttttca tcacgatggc atttgctcgt
     8521 tttaacttaa aaccagagaa ggttgcacga gcagaatcaa gggctatttg atgaatttca
     8581 tcatctgtta aagaacgaaa gagcataaaa acctccaaac aaaaacagga caccattatg
     8641 acattaatcg accaaattaa acaacacatc gccgaaagcg gcagttctca ggggaaagtt
     8701 gccaaagaag ccgggattaa tgccggggcg ttatcggctt acctgaatga aaattacaaa
     8761 ggcaataatg aagaacttga agcaaagctg attgcttatt tagagcgtat tgaggcgaag
     8821 aaaagagagt ttgtcgaagc tccgagtttt attgaaacca aaaccgcaaa ccaaattttc
     8881 ggttcgttac gatttgctca aaatactggc gtgcttgcca ttattcacgg tgcgagtggc
     8941 gtgggtaaaa cacaagcggc tagagagtat cgtaaacgct atgcgaatgt atggttggtt
     9001 accgcaagcc cttctcgttc ctcattaagt gaggtgttat atgaaattgc tcttgaactt
     9061 ggaatgaacg atgcaccacg ccgcaaaggg acattggctc gtttaattgt tcgcaaaatg
     9121 aaaggcacag caggtttatt aattattgat gaagcagacc atttacctta cgaagcctta
     9181 gaagaattaa ggctgttaca agaagaagta gtgaatgaaa gtgacatcgg agctggtgtt
     9241 ggcttagtgc tgattggcaa tgacaaagtc tacacccgaa tgaaaggcgg aattaaccct
     9301 gctcacgaat atgggcgact ttggtcacgc agtgccaaac gcaccagtat tcagaaaacc
     9361 aaaaaagaag atacccaagc ggtagccaaa gcgtgggggt tgagtgaaaa ccaagaagca
     9421 ctcaaggtaa tgcaagccat tactgaaact ggtggcggat tacggattct gacacacacc
     9481 ttacgattag cagcgatggt agcaaaagac cgaatgattc ccttaactgc cgatttaatt
     9541 cagctcgcac gtaaagattt actctcaaca ggagattaac aatgagaacc ccaaaaccca
     9601 aacacagttt taaccgcacc aaccaagcag cgtgccgttt tttaaaacaa acccaaaagg
     9661 caattatccg cttaaacagt cttggcttta cggtgctgaa tattgatttt acccgtatta
     9721 agccccgcat tgaggtggaa atcggcaata acaagcacat tgctcaaggc ttgatttatg
     9781 agggtaaagc ctaccgctac agcttcggta aaagcgaaga tttaggcaga tgggaaggct
     9841 actacaccat gctggaaggt atcagagtgt ggtggcgaca agcagcaatt cactaggaga
     9901 aaaacagatg aaaaccttag cactattaac cgccctttta gggcttgtag ggtgtgattt
     9961 agtccaaagc aaacaagcta aaaattacat cggcaacaat ttaactgaaa tctgtataga
    10021 taacgtggtg tacctgattt attccggtga taaaaaaggc ggaattaccc cgaaagtaaa
    10081 taaagatttt tacccttata cctgtacaaa caaagaggaa agacaaaatg gcaaaacccg
    10141 atgaaacacc cattacaaaa gcagaatgtc aatctcagct tgcagagttg ggggtgcaat
    10201 ataaaaaact gccaatggca attacaagac atatttgtaa tgccacaacc aatatacacg
    10261 gcaaagttat aaaggtcagt gtggtagaga gagttggata tggcgtccag attaccgcac
    10321 aaggtaacga gaaatcttgc ttagtaacct atgaagcaat gttaggtatg gcagaagcaa
    10381 tgggattatt tgatgaagtt aaggagcaaa ataatgacta aaaaaacaac cagagtaaaa
    10441 agtgcaaccc aaagtgcgat ttatcaaagc cgagatgaag tgcaagtggc tataaaaatc
    10501 attggtgata aacagcgtga attgcaacgt ttagctacgg caatgaatga tgaattagct
    10561 gctattagtg ccagttatgc tcaacataac cgctaccaac attatgccga gaaagcggct
    10621 gaagcagaac gcaaaggcaa ctataaggaa gctcaagacc attgggaagt tgcaaaatta
    10681 tcagcaaaaa agaccgctaa ccgagactgg gcggaacaac gagcggaatt ttgtaaacgt
    10741 atgcacaata aaccgtttta gggggaagtg atgacagaaa ccgtaaaagc acaacttaac
    10801 agccaattaa atgaggcaat tatccagttg atacaagctc aaaagtattt aaaccaagat
    10861 gatgccattc gcagtggagt gtatatcggt acggtgcagg atttattgcc aaaggtgcat
    10921 ttaaagttat taacggcaaa tcgtaaacat tgatagagat gaggtaaaaa tggctattac
    10981 agaagaacaa tggaaagaaa ttaagcaaaa gctagatagt atcataggga gagttaaatt
    11041 tagatacaaa gagcatttac tcacggtaga tgttgtacaa attaagcgat ctttaaaatt
    11101 ggctgtgtat gttgatgggg aaattgatgg agcttggaca aaagaaggac acgaaattcg
    11161 cccttattta gaagaagttt ggtatcgcaa agaacgccct ttttttaatg ctaaggagaa
    11221 gaaagagtat agaggtttaa tgagcaaaaa aaaactgaat gaaaaaatag taacctactc
    11281 acctatgttt ccatcaccaa ctgcactgac tcgtcaatat aagaaactag atggcttaga
    11341 gttgattgaa gtgatttaaa acccatttac agcccattta accccgagtt atttaaagga
    11401 caacaaaatg aataaaaacg aattttttaa gaaataccac ctagagggtt cactagctat
    11461 tttggatttg gatgcaaatg acgatcaaag ccaattctgt taccaagcat tgttggagta
    11521 tagagaactc ccgttagaca catttcttgc agagtactca gatgatgagg atatgacaga
    11581 gtcagagttt attgagttaa tgcttgatga attagagtgg attatccgca gagctaagaa
    11641 tgctaaacgg tttgttaaaa aacgacaaaa aacgatgagg gaggaaatta tgtaacagct
    11701 caacccaacc aacgccacat catccgtcta gctgagaaac aggtgtggcg tttgttttaa
    11761 gtgggcaatc aaaagcgata acgtttttaa ttgtttattt atcggagtaa caaatgacag
    11821 acaaagccaa gctaatccag cttatccata ttgccaagtc gcaactagca atggacgatt
    11881 taagctaccg tgaaatgctg aaacggctca ccaataaaac cagctcgacc aaatgcacgg
    11941 tggtcgagtt gcacaaagtc ttacacgaac tgcaaaccaa aggagcaaaa gtaaaatatt
    12001 ttgccaaacg cagcaaaaaa ccgaccgctt acagcccggc aacaggggaa acagcggtaa
    12061 aaagccaaat tgctcataaa atccgagcgg tatggataac aatgggcaaa cacggatttt
    12121 taaacgaccc aagcgaaaaa gcattaaatg cttatatgcg taaggttatc aataataaaa
    12181 ctagaccaac aatattatta aatgtctctg cattagaggc tggagatgca agttatatgc
    12241 ttgaaatcct caaaaaatgg cataaacgtg tgatgattaa agccctaagc aaaagttgca
    12301 cagttgatcc aaagataagc tacgatgaat tagtggagtg gtacaatgaa gttatgtaga
    12361 tgcccgattt gccacagtga tatacaccta gaagctctcg tagaagatga agccgggcgt
    12421 gaactactcg gcaaaatcag ccaattaaca cacggtgttg ctcaaccgat ggttgcttat
    12481 ttaggcttat ttaaaccgca aaaaagtaac cttaataact caagagcctt gaaaatactc
    12541 aatgatgtat tagcactcta cccttgctca ttgctactgg ctcaagccct atctgaaacg
    12601 gtagtaagca tacgcaaaaa acgtcagcaa gcaatggaaa acgggcagaa aattgaaccg
    12661 ctaccgaacc ataactattt aaaatcggtg tatgaaacgc aaaaagtcca ttttgctgtg
    12721 gtgagaaccg gcaaaaccga acgcgaaaca atgaaagccg aactggaaaa aacacgcaat
    12781 gcgattgcct atgtgcaacg gtttgttgat ttaggacgtg aagaggttgt taaaaatagc
    12841 cctgagtatc agatttggtt agctcataaa cccaaataac acaagccacc aaaaggtggc
    12901 tttttaactt tttgaaagtg cgataaaacc tgatttaaac aggctttaaa cgggttttaa
    12961 gattgagttt aaaaaaatat ttcacaaaat aagaatggtt ttttatacaa taaccgaaac
    13021 ggtttttgga taggaaatag acaatggaat tagtggatat ttttgaagaa aaagccccgg
    13081 aagtgttaac cgatttagcc aaacatattg aagtcgcatt agaagaaaaa tgccaattta
    13141 gccccgaaaa ggcaaagcaa atcggtattg atattgccca acaaatggct caaaactggg
    13201 gtggcgaggt aatttatatt cctcgcaatt tgttgatggc tcttaatgag cgagatatga
    13261 aaatttacga agagtttaac ggtaacaatc accgtgaatt ggctcgtaag tacaatgtat
    13321 caatgcagtg ggtatataaa attgtgaaga aagtccataa ggacgaagtt gcccgcaggc
    13381 agatgagtat gtttgagatg taaatcattt tttcccagcc ctgatcattt tcagggcttt
    13441 ttgtgtatta aaagaacgca gtctttaaac ccgtttaaaa tcaatttttc agcaaattct
    13501 ttaaactcct tttaaagcaa ttttaatagg agtgtgctat gtctcaaaat cttacctttc
    13561 gccaaatttt tgaccgttta atcggacacg agggcggcta tgtcaatcac ccacaagacc
    13621 cgggcggaga aacccactgg ggaattacca aacgtaccgc ggttgctaat ggttatatgt
    13681 atgcaatgaa gaatatgacc cgtgagcaag cctaccaaat ctacgaaaaa gccttctggc
    13741 aacgttatcg ttgtgcagag cttaagccag cagttgctta tcaatttttc gacgcagtgg
    13801 ttaatcacgg ttttggtaat gctagtcgta tgttacagcg tgcagtaggc gtagcggatg
    13861 atggcattat tggcaatatt accctgcagg caattaatgc aaaatctgaa agcgatctct
    13921 taatgctatt taatgccgaa cgtctgaagt tttacacaaa attacgcaac ttccccactt
    13981 ttggtaaggg ttgggtcaat cgtgtggcag gcaatttaga atacgcagca caagataatg
    14041 aggtttaaaa atggcaaaac tatttaaaga actactctca accaatggca cattatccac
    14101 cactagcacc gtgcagtttt ttggcacatt gtgtgtattt ggtttaatgg tttatgcagt
    14161 aattacccaa caaccttatg ccgaaagcct attaaataat gtgttgattt atctttttgg
    14221 ggcaactacc gctaagggtg tagtaaccag ctatcaagcc aaaattaaag ggggtatcca
    14281 taaacaacaa agtacattta aagaggagga gggatgttaa tgcaacaaat tttaggcgtg
    14341 attggcgtca tcgcagcaat attgtcttat gctttgttta aaagctggca actaaaacgt
    14401 gagcgtaaaa agaatgccat attacaagct gaaaaacagc aacaagcggt tgaaattgag
    14461 caaaaaaaag cagaggtaaa atatgtgtat atatcaaaga aaaacaatga aaaagttact
    14521 cgcagctctg ctagcgatat tgatgacaag ttgcagcaac acggttactt ccgtgacaac
    14581 aacaggttgc acggcgttca gtctgattta tccgaaccgt gcggatacgc tggaaacgaa
    14641 acgtcagatt cttgctcata atctgacttt tgaggaaatt tgccaaaatg aaatacatta
    14701 aaaaattacg taaacgctgg caaatttggc gttttttaaa aaatcatcct gaggttgcac
    14761 aacgccgaga tttattagcg attgccatta aacagggcgt agaaaaccct gtagggcgtg
    14821 caagacggag ggagccataa tggatttatt tacagtcttt tgggagtcta tccgtgctaa
    14881 ctttggtttt atttctgcgt tactcaccat tgttgttacg gcattttggc tcaagctaga
    14941 tagcaaatac gccaagaaaa atgatcttgg tgaattgctg gaaattgcca aaagccacga
    15001 taaccgctta accaccttag aaaccaaggt agaaaacctg ccaagtgcgg tggacgtgga
    15061 aaagctgaaa accttagtca ctgatgtaaa aggcgatacc aaagccacct caaagcaggt
    15121 ggatagtatc agccaccaac tcggcttgtt attagaagca aaattaaagg aatgatatgt
    15181 cgttaagaga tttactcact caagaccaac ggctggtgat tttacgctca ttagcggaag
    15241 ccggctatga tgccaatgag tcaattatta gtgattgcct agatttatac ggtcacgata
    15301 ttagccgtga tttagttcgc acccatttaa gttggcttga agagcaaggc ttacttacct
    15361 tagaacgttt gcgagatggc tatatggtgg caagcattac ccagcgtggc ttagatgttg
    15421 ctcaagggcg tgttgtggta agtggcgtta aacgccctcg ccctaaaatt taaacggtat
    15481 ttaaggagcg tttaaatgag cgagaaaaat actcgtggtc gagcatcaaa agtcgattta
    15541 ctgccgccga atattaaaac ccaactggcg atgatgttgc gtgataagca gtactctcag
    15601 tcacaaattt tagaagaaat taatgactta attcgggatt gtggcttgcc tgatgaaatg
    15661 ctgttaagca aaaccggatt aaaccgctac gcaagccgta tggaacgctt aggggcaaaa
    15721 atccgtaatg cccgggaagt tgccgaaatt tggactaagc aattcggcga aatgccacaa
    15781 accgatattg gcaaaaccct aatggaaatg gtcaagcaaa ttgcctttga aacctcattg
    15841 aaattaggcg aacaagaagg cggtattgag ccaaaacagc ttgctttgct ctcgtctgct
    15901 attcaacgtt tagaacaagc cgaaagtttg agttttaaac gggaacaggc aatccgtaaa
    15961 gaggtcgcac aacaagccgc tgaaaccgct gaaaaagtgg tggtgcaagc gggtttatcc
    16021 gctgaaaccg tccgtacgat taaagagcaa attttaggaa ttgcataatg gcactactca
    16081 ataacagacc gctgaatgaa ttagcccctg aatgccgttc gtttttagag agcattcacg
    16141 cttttaatcc taacgaactg ttattgggct atcaaaagcg gtggattgcg gacgacagcc
    16201 aactcaaaat tgccgaaaaa acccgccgtt gcggtttaac gtgggcagaa gcagcagata
    16261 acgccttaat cgcaagcacc cgcaaatcag acggtggctc tgatgtattt tacattggct
    16321 caaataaaga gatggcacgt gaatatatcg atgctgtcgc aatgtgggca aaagccttta
    16381 atcgtgtggc tggagaaatc caagaagaga tctttgaaga cgaagataaa gacatcttaa
    16441 cctatgtaat ctacttctca tcgggtttta aggtcaaggc attatccagt aatccgaaaa
    16501 acctgcgtgg tatgcagggc gtggtggtga ttgatgaggc ggcattccac gaatacttag
    16561 cggaagtctt gaaggcggcg ttagctctca caatgtgggg ggcgaaagtc cgtattattt
    16621 cgacccacaa cggctcggaa aatctgttta atgaactgat taccgatagc cgtgccggcc
    16681 gcaaacgcta ctctgtgcat acgattacga ttgaagatgc ctgccgtgat gggctatatc
    16741 aacgtatctg ccaagtagtg acgaaaaaaa cgtggtcacc ggaagcagaa aaagagtgga
    16801 ttgaaaacct actcaacgac accgccagcg aagaagacgc attggaagaa tacttctgcg
    16861 taccgaagtt cggctcaggc ttatggctct ctcgtgcttt gattgaacgg cagatgagcg
    16921 aagccacgcc tgttatccgc tttacggcaa aagatggttt cagccttgtg gctgaaccga
    16981 cacgctatgc ggagattgcc gaatggtgtg aattagaact tgagccgata ttggcaaccc
    17041 ttaaccctga tttgttgcat tttatgggcg aagactttgc acgcagcggc gatatgacct
    17101 ctctggtggt gcttgctcag caacaaaacc ttgttcgtaa agtcgccttt attgttgagc
    17161 ttggcaatat gccctacaag caacaagagc aaatcgtgat gtttatgctt aaacgcttac
    17221 cgcattttgc cggtggggct tttgacgccc gaggcaatgg tggctattta gccgaagctg
    17281 cacgagatga atttagcacc ttgattgact gcgtgcagtt atcggaaaaa tggtatcggg
    17341 aacacaccgc cccctttaaa gcggcattgg aagacggcga gctggaagct attccaaaag
    17401 atgcggatat tttggctgat ttgcgttcat ttcaggtggt gaaaggcgta ccacgcatac
    17461 cggataaacg cactaaaagt gcagatggga aaagcaaacg acacggtgat accgcaattt
    17521 ctttgctgtt ggctcattat gccagccgac aattagtgca aatgccagtt gagccggtat
    17581 cacgccgtcc acgccatagc caacaattaa cagaaggata ttaacaaatg agatatgtac
    17641 cactttgttt aatgatgtgt gcctcattct acctatttat taacaacatt gacggctggg
    17701 gttggggaat tcttttatct tttattttag cgagtgcagc ttatggcaaa gaagaataat
    17761 ttaattagtg aaattgccac ccgtgccaga agtattgatt actgggcatt tggctattat
    17821 ctgccgaacc ctgacccgat tttaaaacga atggggaaag atatttccgt ttaccgtgag
    17881 ttgttatcag acgggcaagt tcgctcaggc gtacgccgtc gaaaagcggc gattaaaggc
    17941 ttagagtggc gaattaccac cactaacaat gagaaagtgg acgagcagat ttatcaaata
    18001 tttaaccgct tgccgatgaa taacctgatt accgaaatgc tcaatgcagc actctatggc
    18061 taccatatca gcgaggttat ttgggcaaaa gagggtgagt tatttgtgcc aacagaaatc
    18121 attggtaaaa agcctgaatg gtttatgttt gacgacgaaa acctactgcg tttccgtacc
    18181 aaagaaaact gggcggacgg cgaattatta ccagatgata agttcttgct tactacgcaa
    18241 gaagccaccc aagataatcc ctacggttta ggcgatttat ccctctgctt ttgggcggcg
    18301 acctttaaaa aaggcggttt caaatactgg ttggaattta ccgaaaaata cggctcaccg
    18361 tggttgattg gcaaacaccc tcgccaagct cacaatacag ataaagagcg actagctgat
    18421 gccctagagg gaatgattag ctcagcgatt gcggttatcc ctgaagatag ttcggtcgaa
    18481 atcaaagatg cagcgggcaa atctgccagc accgatgcct ttgaaaagtt cctcaatttt
    18541 tgcaaggcag agatcaatat cgccctactt gggcaaaacc aaaccaccga gcaagaaagc
    18601 aaccgtgcca gtgcacaagt aggcttggaa gttatggaag atattcgctc ggacgaccaa
    18661 gcgatgattg aagccacctt caacaccttg ttgcagtgga ttgtgaaata taacttcaat
    18721 gtggaacaac tgccgaagtt tgaattttac gagcaagaag ccatcaacac cgaccaagtt
    18781 gaacgagaca gtaaactcca cgcaatgggc gtgcgttttt ccaaagccta ctttgagcgt
    18841 gaatatggct ttgaggcggg tgatattgag gtgcaagcgg tcgaaaaagc ggaaaaatct
    18901 gcaaatacca cagaatttag cgaaggacaa cgccgaaccc aagtgccaat gcctgtgcca
    18961 attttggaac agctagaaca cgagggagaa gcaatggtgg acgattggct acaaggggtg
    19021 agagataaac tcgctcaagc agatagtctg gaggatttcc aaagtcagct agatagcctt
    19081 atccctgaat taagctttgc cgaatatggc gagctgttgg cgttaggctc aacggtggca
    19141 gagcttgcag gcagacaatc ggtaaacgat gaaattaagg caaaacgcaa tgcgtaaatt
    19201 tacctttaaa cagcaagccc aatattttga gaaaaaactc aatctccgca cgaatagcta
    19261 ccttgatatt ctgggcgaag agcacgacta ttttttcgtg gtggctgggg cgaatcgtaa
    19321 tgaagtgttg agtgagtttc gcaaggcggt ggatgaggct attcacaacg gcgaaacctt
    19381 agagaacttt cgcaagcggt ttgatgaggt tgtggcaaaa acaggctggg agtacaacgg
    19441 cggacgaaat tggcgaacac ggattattta cgataccaat gtttacgggg cgtataaccg
    19501 tggacgtttg caacaacatt tagagcttgc ggaggatatg ccttattggg aatatcaaca
    19561 caacgacaac gcccaccctc gcccacagca cgtggcgtgg gacggcttgg tgctgcgtta
    19621 tgacgatccg ttttggaaat atcactatcc aataaaagcc tacggttgcc actgcaccgt
    19681 gcaagcgtta gatgattttg acctcaagca cgatggtaaa accgtcagcc caccacctga
    19741 aattgagttt gaacaaaaaa cggtaggcgt gcggacaggc aattcacgag tcgtaactgt
    19801 gccgaaaggg gttgatgtgg gttttacacc gcataatttt gataatctca aagccgggag
    19861 agcagcaaat gtagataagt tgctaatgca aaaaatggtt accgccgatc ctatatttgc
    19921 ctccaaagca gtcagtgatt tattggcaaa agagccggtt gcaaagttac ataaccaagc
    19981 ctttaaaaat tgggtaaatg atgttgccaa tgctaaagga agtgcattat cccaagtaga
    20041 gaatatgcag ttgttagggg tactacctgt tgcggtgatt gaacggttac agcagatcaa
    20101 tttagctccg caatctgcaa ttattgcaat aacaaaaggc gatatggtac acgctctacg
    20161 agagctaaaa caaaataccg gtattgccgt accgttggaa ttttgggaaa agttgcctgc
    20221 aaagttacaa tacccaaatg ccatcttgtt ggaaaaacaa caagcagaaa ctacattgct
    20281 ctttatctat gacgtagctc aaaccaaaat tgccgtaaaa gtcaattatg atgcaacttt
    20341 acaagataga cacggagcaa aaggacggca gaaagtctta ctgaatcgag cggttacagg
    20401 tagtttattc caagatacaa ctggattgaa aagttcaaag tatgaagtgc tattgggaga
    20461 aatgtagcgg cgaaggactc gaaccttata atgtaggtta aacctacaac ctttaccaat
    20521 taggaaacta ccgctacatt gtgtaaattc actatacccc taaattattt tttaatcaat
    20581 aggagaaaca aaatggcaga aaaacaactt tcctttaaag tagccgaaat agtgccaatg
    20641 tcagctatta acactatgcg gcacttaatt agtttggcat tacaagcgaa ttatgagaga
    20701 gaaaaatctc gtgcttgata atttcaatgg cttgtagttc gggaactata ttatctgaaa
    20761 caagccattg ttttgttgat gtcagacatt tagcgatgaa atccataatt aaaccattag
    20821 cagtagctcg ttgttccgga gtaagttgta accacgacgc ctctgtttgt tggtctaatg
    20881 tataaagaaa cataacggct tctttttctg ataatgggtc aagtggtaat ttttcagctt
    20941 ttgtgactaa ccattgacgg gaaagcaata aatcataaac cagttctatt gcttgttctg
    21001 catttaccat catattctaa ttccttaata tatcagggca acattaccca atctatattt
    21061 tactgagatt tgcttaatga tcaaaatcac cctcaacaac acccaagcgg tcaaatcgtt
    21121 acaacaaatt gcaaatcagc tggaacaacc tcgccgactg tatggcattt taggggaaac
    21181 cctaaagaaa attcacactg cacgctttaa agcggaacaa gaccccgatg gcaacaattg
    21241 gaaaccgtta gccagtagca cgcttgcttt aaaacgtaaa cgaggtaagt ccactaaaat
    21301 cttacggcaa gacggctacc ttgccgataa aacggcttac aatgttacaa gtgataatgt
    21361 tgagtttggc tcgcaggaag tgtatgcacg gttgcatcaa ttcggcggta aagccggacg
    21421 aggcaaaaaa gtgactgtac cggctcgccc gtggttaggc gtaggcgata aagatgagca
    21481 gttactttta cgcaaagctg agtggcattt agggcaaatt atcggtcgta tgggaaaata
    21541 accgcttaaa atcaaattta acgcataaaa acgcctctgt gcgtttttat tttttattcg
    21601 cctgattatt cgactcaaaa aatttaaacg ctgttaaacg catttaaacg gtatttaaac
    21661 ggtattgccg attgtgataa atcctcttta ttaaaacacc ctcgaaaaat ctttaaacca
    21721 gtttaaaagc taatttctct ccaaatcctt attattgccc catcacggag gcaatatgac
    21781 ccaaattgaa atttttaaag ccggtaagcg ttatgacgcc aacggcacgt taattgacat
    21841 tacccctgaa atgttgcaac agaccgttgc tgcctataac cccgaatttc acgaagctcc
    21901 gctggtgatc ggacacccga aatccaacaa ccctgcgtgg gggtgggtaa aagccctttc
    21961 ccttgagggc gatgtactaa aagcagaagt agatcagcta gacgctgagt tttcagaaat
    22021 ggtggcaagc ggcaaattca aaaaagtctc ggctgctttt tacttacctg atagcccgaa
    22081 taacccacat aaaggcgtgt tatcgctacg ccacgtgggg tttttagggg caatgccacc
    22141 ggcggttaaa ggcttaaagc aggtggaatt tgcagaagat gatgattttg tcgtcttttc
    22201 tgaatggggg gttgcaagtc tatttagtcg ttttcgtgat tggttggtga gtgagttcgg
    22261 gcttgaaaaa gccgataaag ctcttccccc acacgaaatt gattggctga aagaagaggc
    22321 aatgcgaagc caaattagca aacaggtaca cgccgaacag gcaacacctg aaccgatttt
    22381 taatgaaccc gcacaaccag aaggagaacc tgaaatgagt gcagaagaga aggaagagct
    22441 tgaacgctta aaagcggaaa acgagcagtt gaaagccgaa aaagcccaag ccgaagcaga
    22501 gaaaatggaa gcagagctgg aagctgaaaa agctggtaat gcagagtttt gtgaaggttt
    22561 agtcaagcaa ggcaaacttg ccccggtggc aaaagcggcg tttgtgcagg ctttaaataa
    22621 cctttcagta ttaaaagccg gtcgtgagcc ggaatttaat gagggcgaag atgtggtttc
    22681 acagtttaag tctgcaatgt cgcaatcacc acagattatc caatttggag aatatgccac
    22741 agcagataaa gccaacccac aagaagcgga agcagtggaa tatgctgaag gcacagatcc
    22801 agtttcgatt gaagccgacc aaaaagtgcg agcttatatg aaagcccaca atgtaggcta
    22861 cgctgcggca tttaatgcga tttatcgcta atgtttaacc cacaactgaa aaggaatact
    22921 aatgacaact cataacttac aaaaactgcg tgtacaagac cccgttttaa ccgagctggc
    22981 acaaggctat cacaataacg agctggttgc cgagacctta atgccgactg tcgaaatcga
    23041 aaaggaagca ggcaaaatcc caactttcgg gcgtttagct ttccgattgc cttctaccgt
    23101 gcgtaacttg cgtggttcat ctaaccgttt agatccagaa gatattgggg cgattgatgt
    23161 ggcgttagaa gaacacgatg tggaatatgc cattgattat cgtgaagaga acgaagccat
    23221 tttttcttta cgtcaatttg ccttaaatac cacccaagat gtgattgcgt taggtcgtga
    23281 aaaagcggtt gcaaccctcg ccttagatga aagccgttat gaaacagaca ataaagtcac
    23341 gctgtccggc accagtcaat tcagccataa agatgctgat gtgtttaagg tatttgatac
    23401 cgctattcgt gccgtgaagc gggctatcgg tcgtaaaccg aatgtgtgtg tgatttccgg
    23461 tgatgtgtgg gcagcgttaa aagaacatcc ggcagtggtt gaaaagctca aatacagtca
    23521 agtagcgatt gttacccctg aggtgtttgc caaactgatc ggcattgaga ccgtaaaaat
    23581 cggtgaagcg gtgtatgaag aaagcggtca gctcaaagat atttggagca aagatattgt
    23641 ggtggcgtat gttgctcctc gttcgaccgg aggcaaaggc acggtttacg agccgtctta
    23701 tggttacacg gttcgccgtc aaaaaggctt atttgttgat acttataaag agagtggcgg
    23761 caaaattgaa gtggtacgca cgaccgatat tcacaaacct catttagtgg gtgcggcagc
    23821 aggctattta attaaagctg ccgtataagc cacataccat agggtgcgtt tactaacgca
    23881 ccattatctc aaacacatta catagaggaa aaaacgatgg ctaaatttat tgttttacat
    23941 accccaattt tacacgatgg caaacgctat gaggtggggg cagaaattga actcaccgct
    24001 gaacaagctg agaacaatgc gatcaactta aaagcggtag aagctgttcc aaaaccacct
    24061 aaaaatgcct caaaacctga agatgagcca aaacccgaag gtgaacctaa gcctgaagat
    24121 gcagtgacgg aagatgatgt gaagctggct gaagcaaaaa ttgcagaagc agagcaacca
    24181 aaagggaata aaaaataatg tatgtgcaga ttgatgagct actcacggcg tttagtcgca
    24241 agattgtggt gcagctcagt aatgatgaac cgacagcgac cgagcctgat ttaaagatgc
    24301 ttgaaacggc agttaaagtg gcaaatgagc gaattgatgc agcgttacgc tctcgctata
    24361 ccttgccgct ggctgatgtg cctacgctta ttaatcagca cgcattaacc cttgcccgtt
    24421 attggcttta tgcccgccgt cctgaaacca aaatgccgga caccgtgaag gaaacctacc
    24481 aacaagcggt gaaagagttg gaacagattg caacaggcaa actgcattta ggcattgctg
    24541 aaagcagtca aattttagaa gacgatgttt tagccgataa cagtgaatat gaagttcggg
    24601 cgaacgctcg cattgatacc agtcgttatt aaagattatg tcagccacac aaccgatttt
    24661 agaagatatt tgccaacact tgcggcaagc attgcccgag tgggaggtgg aactcttccc
    24721 gaatgaccca agcacctatc atctctcgca cattaacggt gcggtgttga ttagctattt
    24781 ggcaagcaaa tttgagaaac ctcgcactac acaagcggtg ctgcaggttc gccacgttca
    24841 gattgcttta acggtgctga cccgtgattt gcataatgat gtcggggcgt tggatttgct
    24901 ggataaattg cggttattgg ttgtggggtt taagcctcaa aactgcggtg agtgttggtt
    24961 gattgatgaa ttttttaatg gctcaagcga agaaaccggg ctttggcaat atcagttgat
    25021 tttgcaaacc gaaactcagc aggtgcaaca ccaagcggtc gaaaatctgc caaaatttgt
    25081 aaccgctcat cttcgccgtc aagaccagcc tggttcgccc ggacttaaaa cttaaatcgt
    25141 agggtgcgtt tgctaacgca ccatcaacat cacctgattt tacggtgcgt tggcaaacgc
    25201 accctacaag gagaatatta tgacgtttca ccacggttct gaaaccgaac gagtaaacgg
    25261 tggctctgtg ccggtatcgg tggttgatag tgccattatc ggcattgtcg gtactgcccc
    25321 aatcggcgca gttaatgaat tgaccgtctg tttaaccaaa aaagattttg ccaaattcgg
    25381 cacgatttta aaccaaggct tcaccttacc tgatgccttt gatattttag ctcgttacgc
    25441 agcgggtaaa gtgtatgtgg tgaatgtgct tgacccttcc cgccaccgta ctaccgtgac
    25501 cgatgaagtc ctcacactgg atcgcaatac gctgaccgct caaacagcga aaaccggcat
    25561 tattgcggtg acgagagtga aagacggtgc aaacgtgctg aatgctgatc ggtattcggt
    25621 cgatctgcaa accggcgtgg tgacctttgt ctctgcaccg tctgccccga aaattagcta
    25681 tatctatgct gacccgagca aagtgaccga agaggacatt aaaggcgggg tggatagctt
    25741 aaccggtaaa cgcaaaggtt ttgaactatt gcgtgatggt tttaaccttt acggtgcgga
    25801 tgccaaaatc ttaatctgtc cggaatttga taaaaccgca agctgtgccg ctgcccttgc
    25861 cacccttgcc gaccaactgc acgctaaggc gtatattcaa ctgccgaaag ggacgagctt
    25921 atcaaaagct attcaaggac gtggcccggc agggacgatt aacgcctcgg caagcaatga
    25981 gaacgtacgc catttcttcc cgtatgcgtt ggggtcaagc aatactcttg aaagccttgc
    26041 gacccacgcc gccggtttgc gtatgttgat tgatgtggag aagggctact ggttcagcac
    26101 ttccaataaa gagctgaaag gggtgatcgg gttggaaatt ccgctgacgg ctcgggtgga
    26161 cgataagcaa agcgaaacta atctgctcaa tgcggtaggg attaccacca ttttcaatag
    26221 ttttggcaca ggcttccgct tatggggcaa ccgttcgtct aacttcccga ctgtgaccca
    26281 tatcagcaac tttgaagtcg cctctcgcac aggcgatatt attgatgaaa gcattcgcca
    26341 agccgaattg cagtttattg atttaccgat tgatgatgcg ttgctggata gcttccttga
    26401 aaccatcgac actttcctgc gtacgcagaa atcgttggta ggttattcgg tgagcttaga
    26461 ctatgaatat gacttggttg atgcattcag ccgtgggcaa gtcccgattg tgtatgaata
    26521 cactcctaaa attccgggtg aacgtatcag caataaatct gtgatgaccc gtaaatactt
    26581 ggcaaacttg gtgtcgcaac gataagggga aataaatgag tattgcaatt aaccaaattg
    26641 taaacggaaa tgtttacatt aacggcaaca gccaaatggg gcgagtgaat gaggtcaaaa
    26701 tccccgatat tgagtttgaa tttatcgaac acaaaggcct tggaatgcac ggtgtgatta
    26761 aattacctgc cggcacgaat gcgattgaag cagaaatcac ttgggacagt ttttatccgg
    26821 aagtgcgtgc ggtaatgctt aatccgtata aatacactca gttgcaaatc cgctctaacc
    26881 tgcaagtgtt taactcgcag ggcttggcag ccgaagagcc gatggtcacc attatgaatg
    26941 tgtctgccgg taaaatcggc ggcacagggc ataaaaacaa agaaaatgcc gaatttgccg
    27001 acacgttaaa tgtacattca attaaacaga ccgttgccgg tcgtgagctg ttatttattg
    27061 atgtgctggc gaatatctac cgtgtgaacg gggtggatgt gttgcaaaaa ttccgcacca
    27121 atatcggtta gtaaaatctt taaagccgtt taaaatcaat ttaaacaccg tttaagtaaa
    27181 ctcctttgtg aagttaaaca acaaccactc acaaaggagt ttttttatgg ctaacgcagc
    27241 tcaacaagta ttaaccaatc ttcgtgtaca aaccacttat aaattgcaat accctatcgc
    27301 tttaccagat ggtagagtta ttgaaacctt agatgtacgt cgtccaaaag gtaaagattt
    27361 tcgtttgctt gatgaaaaag ggtttgaccc tgaaaaagat ggcgtaaaaa ttctacgctt
    27421 ctatattcaa cagctcacca cacttgtgcc ggaagatatt gatgaactcg atgctgccga
    27481 tattaagggc ttaaataacc tattggaaga tatgcttatt gagggaaagt ccgacaaata
    27541 agtgaactag ataccgttta tgctgatctc gcttggtggt ttaagttttc accaagcgag
    27601 cttttagaat tggatttagt ggatattccg aaatgggtag aacagatgaa caggcaaata
    27661 aaagccggtt atgggcagat tttacggtag agccaaataa agggttcggt ggctaaagta
    27721 agtaaaatgg cgacgcccca agctagatac acaccaaccc acgccaagat tgtcaaaatc
    27781 aatccataaa tgagtacaaa actaacgccc tcgcttaggc tttgtataga ttgaatcgca
    27841 tcataaccag tagaagatac tccaaccgac taatgctacc gctaacaacc atttagcggt
    27901 gcattctgtt cttgttacac aagcctcgaa accagcccac tcagtaattc gattatttaa
    27961 tttagtcagc atacaccacc tccttaaact ttccctattt tacgctaagg atttaaccaa
    28021 tggcaaataa tttagctatc ggaatggtaa ttggtgcaag cctatcatca ggttttcacg
    28081 gtgctttttc aggagcaaag aaaaagctag aacaattaga acaggctgtc gctaaaaatc
    28141 agcaaagcca ttctaaatta ggttctgagc ttactgcatt gcgtagtaaa caagctactc
    28201 tctatgcaga aatgagccga gccagtagta aaggtggtgc tgggcttgct cttatgcaac
    28261 aggaatataa aaaaattggc aaagaaattg ccaatattag ccgagagcaa cgcaaatgga
    28321 gtacagaatt agaaaaatct attgctaagc aaactaaatt acgcaatgca atggaacgtc
    28381 atacacaagc taaagaaaac cgagacgagc ttaaagggaa aataattgga acggtagctt
    28441 ctgcggcaat gggtgtcggc gtgatgaaaa cctatatgga gcaagaagaa gctgcgaata
    28501 atcttaaaat ttcaatgctg aaagcagatg gttctttcgg gaaatttgaa gagattggca
    28561 agattgctga cacattaggg acagatttac cgggaacaaa aaaagatttc tacaagctcg
    28621 caatggcatt aaagaaacaa ggtgtttctg atgatgtgct gaccggaggg gcattaaaaa
    28681 cttctgccga actgaatgtc ttgcttgata tggatcagga aagtggtgga gagtttttag
    28741 cgaagtttat ggaatctcac cggctcaatg aaaatgagtt accacaagca gccgattatc
    28801 tgcaacgagc aatgtttgcc ggcggtttaa gtaaagagca gatgtatgaa tcgatgaaat
    28861 actatgctcc aaaactgaac tcaatgaaac ttacaggggc tgagaatacc gaaaaagtgc
    28921 tggcgattga agcaatggca ggtcagcaag gcttagaggg ttcaaccttt ggtacgggct
    28981 taaatatgat gttaagccgt atgaataaag gaccggaaat gctcaaggca gcagccaaag
    29041 gaatgaaagc cgaagctcga gagatgatgg aggctgtcgg agtagaattt aatttctggg
    29101 ataaaaacgg ctcattcaaa ggcattgatg gaatgctggc tgaaatgacg aaatttgaaa
    29161 aaatccgcaa aaaattcggt gacaaaggtg taggtttagt tgcagaagag ctgtttggca
    29221 ttgaaggtgg gcgtcttgct gatattttgg ctatgaaagg tcaaaaaggc ttagatgaaa
    29281 tgctgagtaa aatgcgtgaa caagccagcc ttcaagatcg cattaacctt aaaacaaata
    29341 cattaggtgc tgccctagaa tctttaggag gagcgtggga aacctttgtg ggggatattg
    29401 gctctgtctt tgccgaagat ataaaagggt tttcaaaagg cttgcaatct gcggtggaat
    29461 ggcttgtgcc atttgtatca aaacataaag aggcgattaa atttgtaggt ggtttggttg
    29521 ctggacttgt tattttacga ggcgttttac aagctggttc ttttgttatt caaacggtaa
    29581 ctatggcaat gaacgccctc aaaattgcag caatgaccaa tcctattgtc ttagtcattg
    29641 gagcaatcgc agcgggtgct tacttgattt atagccattg ggatagcatt gccccttggt
    29701 ttgcaaatct ttggcaaaat gtgaccgctt acttcaatca attttggact tgggtaaaag
    29761 gtgtttggtc gggcgtgacg gactgggtgt cttctgtgtg gaatggtgta gccacttttt
    29821 tcgggcagtt atggactacg attactagct tatttagtgt agcttggaca aatatccaaa
    29881 caatatgggg aggagcaaca gcttggttct ctggtttatg ggatgggatt aagtctgcgg
    29941 cttttggtat gttcgacagt attagccaaa aagtcagctc tgttgtagca agcattaaga
    30001 gctttttagg ctttggcgat gatgtggata aaatgggggc aaaaattggc aatgtagcta
    30061 cccaagtcat cagcaaagaa cactcaggac aactcagcaa aaccgcagat atggcagcca
    30121 atacagggtt ctctagcggt ggtttcaccg ggcaaggcgg taaatatacc cctgccggta
    30181 ttgtgcataa gggcgaatat gtgatgacga aagaagcgac ctctcgtttg ggtgttggaa
    30241 tgctggatag cttaaactat ggcggtgcta tgggtttcac tcaacctgtt ttgcaaccga
    30301 ttttaggtaa gcaaaaaggc ttttttggct cactttggga cgatgtgaaa ttcggggcaa
    30361 actttgtcgg caatctgctt ggcttaaatc aaggcagcct gaaaacgcct gattttaacc
    30421 caaatgcgac caatgcaagc ggtcaaaatt cgtcgatttt tagcaattat gaaccactca
    30481 accgaaatgc ggtaacacag caggaaagct cgcaagcacc gcagatagtc gtgaacttta
    30541 acccgacaat caatgtaaac ggtaatgcta cgcaagaggc tcaatcgcaa attatgcagc
    30601 agttgcaaat gagtgcttat gagtttgaga aattgctcaa tcgtgtgcta gaccaacgaa
    30661 gccgtagagc ctattaggag tgatttatgt attttatgtt aggcaatatt gcctttgagc
    30721 cggtgaattt aactgaattt agcgagcaac ataccgccga atttgccgaa cacgctgtgc
    30781 taaaaggcaa acctcgttta caagcgatgg gcgaaaagct aaatgaactt aatttttctc
    30841 ttcggttgca ccataccata ggcggtgtag agagccgtta tcaagccttg cttgaagcca
    30901 aagcgaagca agcggcattg gcgttaattt ggggcagtcg ttataaggga gattatgtaa
    30961 ttgtcgatat ttcatcgacc acattgttca ccgatggcag aggcaatgcc ctcgctcgtg
    31021 aaatgcaaat cagcctgaaa gagtttgtgg gcgataatga cggtggtgtg ttgggtgagg
    31081 cgttaaattt tggtggtggc tcactgcttg gctctatttt gccaagcggt gcggtaacta
    31141 ccctatctca aatcaaaaca gcagtcagcc gaggtgtgga gctttataac agcggcaaac
    31201 gcttagttga cgaagtgcaa aataccgtgg cgattattcg gcagttgaaa aatgacccgg
    31261 caactgcatt ggcatattta cccgctgcat tagcgaattt agacggggca ttggggcatt
    31321 ttggtaattt gaccggctca tcggcgacct tgggcggttt gcaggagaaa ctaccggcag
    31381 cagtggtctt tagcgaggaa atcggcgaga tttatcagag tttgcaaaca atgcgaagca
    31441 gtttgggtaa tgcctcggca aatagctggg ataattggtt tacaccggca gagagtgcat
    31501 tgacagaggt cacagacagc tttgaccatc tagcaaaacc ggtggcaaaa atgaccgctt
    31561 ggattgtgct gcgtaccgat gaggaggcag aaaatgacac agttgcttaa acatatcgtc
    31621 aaacagggtg agcgttggga taacttgagc tatcaatact acggcaatgc gtttgaatat
    31681 ggtcgaatta ttgatgccaa tccgcatatc ggtttttgcg aggtgttgcc gataggggta
    31741 acaatttata tccctgtact taacgttaag ccaacgaata atgaaaatat gccaccgtgg
    31801 ctaagggggc gtgatgcgta atgtaccgaa gcccgatttt tcactgtttt atgaaaaaac
    31861 caatatcact gccgagattg agccacattt ggtgcaactg acctatatcg accatttgga
    31921 aggtcaatcg gacgaactca ctgtggaatt tgaagacatt caaggcaaat ggatacgcca
    31981 atggttcccg actcaggggg ataagctcaa agcggcgatt ggctatcagg gcgaatttct
    32041 gacggacatc ggtgagtttg aaattgatga agtggaatat agttataagc cttccactat
    32101 taacttaaaa gctctaagca ccggtatcag caaagccaac cgtactttaa aaccgaaagc
    32161 ctatgagaat acgactcttg ctcaggtggt ggcaaaggta gcagataacc tgaaattaaa
    32221 ggtagtcggt aagattaagg ctatcccgat taaacggatc acccaatatc aagagcggga
    32281 cgtggagttt ttggcacgcc ttgcccgaga gtatcatcac agctttaaaa tcgtgggcaa
    32341 tcagctggtc tttaccgata aaagcgaact ggggcaaagt gagccggtgt taatgttgga
    32401 agaacgggat actatttccc tacgtttgcg agatcggatt aaagacactg caaaggcagt
    32461 ggaaatcagc ggctatgata caagcggtaa aaaagtggtg aaaaaacgca aaaaggcaaa
    32521 agccttacgc ccgaatataa aacaagctaa atcagccagt gaagatacgc tgaaaatcat
    32581 cacacgaggc gaaagtcaag aacagattga tgcacggggt gaggctgcgt tggctacgca
    32641 aaatgaagat caggcggctg gtgatattga gcttatcggc aatcctaaat tggttgccgg
    32701 agcaacgatt ttattgcgta actttggcgt gtttagtggc aagtatctga ttaaatcatc
    32761 acgccatacg attagccgta gcggtggtta tactactcat attgaggtca gaatgttgga
    32821 gtttattgcc gatgatttaa tcacattagg tatggaggct ggcaatgcaa acgcataatt
    32881 ttggggcgac ttatcaagaa gggattgtat ccgctgttga tccgaaaacg cacaaagtgc
    32941 ggtgtaaaat ccctgcgctg gaagatttag aaactgcttg gctgtcgttt ttgaccccga
    33001 acgccggtgg caatcagttt tactgtttgc ccgatgtggg cgagctggtg gcaatgctac
    33061 ttgatgcaca aggcgaaggt ggctgtgtgt ttggggcaat ttataacgag caagacccga
    33121 caccggttgc cgatagcgat atgtgggtta agaaattcag caatggcacg gagatttcgc
    33181 ataatcgcaa aaccggcgat gtggtagtga agactaacgg gcatttaacc gcaacggctc
    33241 aaggtggggc tacgattaat gcaaacaccg tagtcaatgg cacattgcac gctaccggta
    33301 aaatcacctc tgacgaagaa gtctctgctc ctgttgtgaa acaaggcacg gtagagcttg
    33361 gcacacataa acacggcggt agccctgaac ctaataagta attctttaaa ccagtttaaa
    33421 atccctttta aagatagccc tgtatcatca gggctatgaa cagacaaact tccattcaat
    33481 taacccactg gcaacttgca ccctcaaccg atacagttga ggtggtgcaa ggtattgatg
    33541 atattcatct ttgtattgtc aatatccttt caacccaaaa aggcacggat attttacgcc
    33601 ctgaatttgg ctctgaccac tttcgctaca ttgactaccc tgaagatgtg gctatcccga
    33661 attttgtacg ggaaattaca accgccttgc aaaaatggga aaaacgcatt gaggttgaag
    33721 aagtattggt ggacggttca gctccgcatt ttatttttac tgtgatgtgg cacttaaccg
    33781 atgatgttta tcgtgaaatt taccgaacaa cggtataagg ataggcaatg acagaagcga
    33841 ttaaaatcat tgatgacgat gtaaaaaccg tacttgccga agcgattgcc gattatgaaa
    33901 aacgcaccgg taaaatctta caacctgcac atattgagcg ttccattatt caaacctacg
    33961 cttaccgtga gcagttatta cgcaaaggca ttaatcacgc ctttttacaa acctttccgc
    34021 agtttgcgac ggggattgcg ttggatttgt gcggggaaac ttttggttgt tatcggctta
    34081 gagataaacc tgcccgtact ttactacgct tttcagtaag tggtgaacat acagctatag
    34141 ttatccctaa aggaacgcag gtggcaatta atgacgagct atacttttca acgctcaatg
    34201 acgatgttat tactccatta attacctatg tggaaattga tgcagagtgt aatcaggttg
    34261 gtgttatcgg taatggttgg gaatcaggaa gagtcagtaa actaaaaaca gcactggcaa
    34321 ctaattataa agtaacagtt gaaaacattg atattacgag cggtgggttg atgcaggaag
    34381 aagatgaacc ttaccgtaag cgaattttag ccgcaccgga agcctttagt aactgtggct
    34441 ctatcgctgc atatgattac cacgtccgct ctgtatccca agatattgca gatgtgaata
    34501 tctctacgcc taggggtggc ttggtaagaa ttgcggtatt gacccaaaaa gggttaccgg
    34561 atacccgatt acttgatgat attaaaaaac acgttagtgc cgaacggcta cgcccacttt
    34621 gcgatatggt cgaggttatt aagcccacag aacgccgtta tcaaattacg gcacgtttaa
    34681 tattgttaga tggctaccgt gaggatttgg taaaagcaaa agcccgagag gcattacaac
    34741 tctatttgtc agacaagact aaaaaactcg gtttagacat tgtgccgtcg gccatcattt
    34801 cagctttaag agttgagggt gtttacgatg tgaatttaat tcagccagtc aaaactatta
    34861 tcaacgaaac agaatgggcg aactgcacag caatcagcgt agaagtcgaa gaggagcgta
    34921 gagatggcta gcttgcacta tgcggacatt attgtgcgag accctaaata taaagcatta
    34981 gcggatttaa gcaagcggtt aaatttgctc gatacttcgc aaattatgac tacgctggtg
    35041 gatttattgg gcgacgaatg tatcccattg ctggcagaaa aatggtcggt aaccggctat
    35101 gacggcttat tggttgcaga tagcgaaaac tcaaagcgag ccttaattaa aagagcaatc
    35161 gaactacatc aactaaaagg cacgccttgg tcaattcgtg aagtattacg cagactaggt
    35221 ttcggagagg ttgagattga cgagggactg aaaaatcggc tgtatgaaag cacttatgtg
    35281 agcggaatcc ccgaaaacga acgctgggcg cactatgcga ttaggttgag taacccgatt
    35341 accaatgagc aagctcgcaa tatccgtaag gtcttacgca attttgctcc ggctcgttgc
    35401 tctcttgcag ttttggatta taaagcagat ccaattcgat ataacaataa agcaacctac
    35461 aacggcacat ataaccacgg ttcaagttaa ggataaatta tggcaggtgt acaagaaacc
    35521 gcacagtggg aaaaccacgt ttacagaatt gaagaaaatg acccagtcca cggaggagaa
    35581 aacggtgtaa ccaataagcc aattaagcac ctagcaaacc gcacgctcta tctgcgtaga
    35641 ttgctcaccg aggcaggaca acgcattaac ccgaaaaaaa tcacagctac cagcaaaaat
    35701 agtaatgatt taactgggca tactcacgag attgaccacg caagcctaac gcaaaaaggc
    35761 attgtgcagt taaatgcgag tatccaatca actagcacaa ctgagtctgc aaccccttca
    35821 gcagttaaag cagcctatga taaagcagca acagcagaac aaaaagcgac attggcaaat
    35881 gagaaagtcg aggcgattaa agtaggcgga cgaaacctcc tcattcaatc caacactcca
    35941 cacaacggga atgcgtactc agtcagatac gcattggctg aggctccgaa agtaggcgaa
    36001 gagattgtag tcactctatg gggtgaactc ggctctcaac gtactggaat tggcgtttac
    36061 aactctcaag gtgctacgga gttggcaaaa ctggtcaaaa ttcgtgatgg agtttatcaa
    36121 ggtaaaggca tttggcgtaa gccgatgagt gagggacgag agcgaacgcc taacgacacg
    36181 cacctgaatg tgtattttta cccgaaaacc gcaacagata ataaccgtat tgagcgaatc
    36241 cagcttgagc gaggctcaat cggtacagat tggacgccaa acgaggcaga cttaaaggca
    36301 gagattagtg caatccgcac taaactaatc cctgtacggg gtggcaatgt tgctacaacc
    36361 ttaaatgcgg ctaagcggtc ggattggttt agagaaatgc aaatccctta tcaaagtggt
    36421 tgggggtatt acacccaagc atttcataac tcagggacgc aacacaacta cagcaattta
    36481 ccgctgacag gtcgttatta ttttatcgcc gaactctatc ataactctgg ttattctcac
    36541 ttgcgtatca cctatccaag tttaaaacgc acctttgaga gtgctatcaa ccttaacaat
    36601 gaggatttga ttctagattg gcgtgaggtg gtgtttttaa aagatggatt gtatcaaggc
    36661 acttttaaaa caacaggcac actagagtct gcttatcgtc taagagcggc tcgtgatgat
    36721 gaacgttatc agccatacct gcaaatggtc gatatgggct atgaccttgc caatcccccg
    36781 gtaggaaaaa acaaaattat tggcagtgtt gattattacg ttaaaaacgg cacaagcgag
    36841 tcttccaaag cgacgatgat ggcagcggca atgcctgaca agaacgtatt ttgggaagta
    36901 gcattgtgga atgcagcaca gcaacggaat gtattgttta aggggtatag caagactaac
    36961 aatttgagta ttggtaaaac caccgacaat gagcgagacc gagtacaagt caatggcaca
    37021 atccaagcca ccgcaccggc tgataacgcc aataacgacc aagtgccgac tacggcttgg
    37081 gtgcgtaaga tggcaaagat tttagctgat ggcaaggtga gtaaagccgg tgacacaatg
    37141 actgggcatt tattcatcaa gaatggggaa tactctgcgg tacataccta taacacaagt
    37201 ggttggttcg caaaatggga ggcggcccca ttatctgatt cgcactttgc tgccattgta
    37261 tatgccaacg acagagagac agttatcaat cgggtgttaa ttcccaagaa gaatggcaca
    37321 gtcgctttaa ttaatgatat tgccgatacc gttagagccg ctgtgagtcg tagtgataaa
    37381 tcccgtagta gaacttttcc tctgcaaacg gggaaaaaat atacaaccac agggagcgtt
    37441 acgatttatc cagatggccg aattgtgcag attttccact taaaaaatat taaagcggcg
    37501 tggtttgatt atgaggcaag tgcggtagga gataggcata gagttgtcaa tatccctctt
    37561 tggactgcga tgccaaataa aatttttgat gtcgatgtta aaactgttcg cccctcaaat
    37621 aatgcctcaa cttactacat agaagcggct gaatggctga gtgcgtggca gatttacggt
    37681 aatgacacga acaaatcaag tgtcaatatt aatctatctc gattcagagg tggaaaggat
    37741 gaagatatgg acttgtatgt aacagttgag ggatattaaa tggcatattt tgtgaatgtg
    37801 attgatgagc aaggcaatta tgagctaatt gatgatgagt ttattgggct gtatccggat
    37861 ttggatttta acacattacc caaactcacg gataagcaat atcagaccta ccttgccaaa
    37921 gcaaacggca aagagcgatt tgtaaatggc gaatttgtgt atgagcaaat taaggtggat
    37981 atgcaagcgg tcatttccgc tgaaaaatct gcaaagttag cagagattaa ccaaaaagca
    38041 caagccttta tcaatgattt agccaaatac aacgaaacgc ctaagtttga gcgtgatact
    38101 tggcttgagc aagcgaaaga ggcaaaagcg tgggtggctg acccaaccgt acaaacgcca
    38161 acccttgagt taattgcgca aatgcgaggc ataccgctcg acacgctacg ccaaaaagcc
    38221 tacgaaaaag cgatggcgta tcaaacggtg gctgctattg tagcagggca acggcaagga
    38281 tacgaagacc gcctagaaca agcggaaacc ttagagcaaa tacaggcgat tgagccgatg
    38341 tatcaattac cgcaaggagc aaacaatgag caaactgact aaattaaaat cgtggagcta
    38401 ccacgtctta attgcaatag atcaactctt taacgctctc accggtggag cagcggacga
    38461 aacattttct agccgttgct accgtggtgc agtgcttgcg gaaaatccga aaaaacgttg
    38521 gcgtttttgg cactcttttt tgaattgctt atttttagac ccaaagcact gctacgccgc
    38581 ttataaagcg gaggtacacc gcaagcagta tccgaaggca tttagacttg gggggattta
    38641 atgaaaaagc aaaacttaaa attagtgcgg ggcgatgatg tgagttttag attcagcatt
    38701 aaagacagca ccggacaacc tcttgcgtta aaggatttgt ggtttgattt gcacttagtc
    38761 agctatcaag gtgaggtgct gattgctctc tctactgatg atggcagtat tgagacagca
    38821 gaggctggtc agatggtgtt acattttagt caccagcaaa ctgctcgagc tgaatggaca
    38881 agtgccaatt atgacttgca actcacgcac gactatacaa gagtctagga ggtggagatg
    38941 acctctatca ttgaactaga cctgactgat gacctcatca ttgaggtgca gttagatagc
    39001 acaatcatta ccggcgatag ctttttagcc aacctgccgg atttactcca aatttacaac
    39061 caagcaaagt cagatagcag taaggagctt aacaatgact aaacacaaaa accacgaaaa
    39121 ccacccgatt gctataacat tctaccaact tggcaaagat gtcggcgaca ttaaccgccg
    39181 gctagcggtt attgagcaac gtgagcaatc agcacagcca agccaaccac aagctgaggc
    39241 ggttacaatg ccacagcaag atgctgttgc cattaataac atcaatgccg ttttggaggc
    39301 ggtcgaaaaa tacaaaactt ttgaaaaata caacactcag tggcaagagc gttttgaaaa
    39361 attcctgtct cgtaacccga atgattacga gttaagtgaa gagcaacgcc aaaaacttta
    39421 ccacacgatg tgccagcatt tgtggcaggt gaactttact gaaatcaata gtaaacagta
    39481 tgaattaccg atcccgcaac aattccaggg taagtttggc tatattgtca aaacctcggg
    39541 cggtagcaca gaaattagtt ttgagttgct atctgaaact cacagcactt atctttatcc
    39601 ggatagctat attcccgagg gcggtggcga tgtaatgctc aagccggctt atatttattt
    39661 agtgattccg gacttagtgg caatgcgtga gccggaggtg gtgggggttt caccgctgaa
    39721 actgaacatt ctgcagaaac acctgctgac acctcagaaa ctacaggagc agaagccctt
    39781 gaacacgaag gcaaactgat tgatggcgta tggcattttg agcgagagcc ggtaaatcca
    39841 ccgagagatc agaattatta tgtggcaggt aacctgttct acaacggcat accggattga
    39901 taaattgatg tttcagtaaa cctaattagg ggggaatccc ccttttttat tattataagg
    39961 aaagaaaatg aataaatctt tagtagcgtt agctgttgca gcgatggcat cgaaagcaca
    40021 aactaaa
//
LOCUS       DANLXO010000009        39254 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.009, whole genome shotgun sequence.
ACCESSION   DANLXO010000009 DANLXO010000000
VERSION     DANLXO010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 39254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39254
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.009"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            24..1829
                     /locus_tag="PXD69_000397"
     CDS             24..1829
                     /locus_tag="PXD69_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HDL6282635.1"
                     /translation="MLSKLQRFTLMIKSTIIKHPLEILFVTYVTILLINNVSDYELIK
                     RFQNLIALFPICFILLYLIRDTKAYWLFAPIPIAIVFFFGQINLTLLEDSRYWATIFC
                     VFLCLISQYWYKNNHYFVAGTTNKLVNIVFATVLSGIIFATLSAITIAIIALFDLNKQ
                     NNFHIFEKFGIFSSFWAFPVLFLTLEQQTTNDSRYLNRISEMLLNWILSPALIIYTAI
                     IYAYVIFIAAKGQMPDGVVANVALPYLAFGLAIQAVQLLLKNAKWQWFYSHFTYLALL
                     PLTLIWYAIYIRFSHYGLTEARIYLVIGTITLSICYTLLLFKQLAQYRLFSAVSIAII
                     LISVFILDPKTVALKDQTKRLDNYLLKHKLLDVNNKISTKAVLKYQESLNENRDEAEY
                     FYSMLHYVARGMPAAQFKEKYGVNSSYDLMSEIRERNTDPRYFEATNSELVRLTKADM
                     ANAREYITFSSQLYRPNSFSHQKIENKLCQKLLSQGYYFEGNILNIEYQYSETAQDCS
                     SITQDPTEFVIYFKGLGTTIEFNINDILKKIFAKHQLSITQQHKNEVLEKIKGDLLKM
                     DLGNSVLGLKHIELRFEDNIGYIVESISTQYIMLK"
     gene            complement(1872..4901)
                     /locus_tag="PXD69_000398"
     CDS             complement(1872..4901)
                     /locus_tag="PXD69_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4981 domain-containing protein"
                     /protein_id="HDL6282636.1"
                     /translation="MSLPNYYQDPSVLHLNTTLHHAYFIPFAKGQTPNQLEREQSELF
                     TLLNGDWKFNFYPSPHDLPEDFLNTKFTHQIPVPSNWQTQGFDAHQYTNINYPIPFDP
                     PYVPHQNPCGVYQREITFNPKPNKRYLLNFEGVDSCLFVYVNGEFVGYGQISHSTNEF
                     DITKQLKQGKNSLVVVVLKWCDGSYLEDQDKFRMSGIFRDVYILEREQNYLQDFFIRY
                     QLNADLSKAELKVETQFSTYTEAVHFQLFDPENRLVCEQTSGDFCQEICNLCLWNAED
                     PTLYTLCLSYQNEIIEQKIGFRQIRVENGVMLFNNAPIKFKGVNRHDSDPKTGYSISR
                     EQALVDLRLMKAHNINAIRTAHYPNAPWFSELCDQLGFYLIAESDLESHGSSAVYIES
                     PENSIFLNVPNPNKQEEIRQQAVDNFCYFARDPLFKQAILDRNIANVERDKNRTSVII
                     WSLGNESGFGENFEVAARWVKQRDPSRLTHYEGSIYQHSAHQNDLSNLDLYSEMYPST
                     ERLEEYFSDSANHKPFILCEYSHAMGNSSGDMEDYWQTFQRYSGACGGFVWEWCDHAP
                     LLPNSELSAEQKTEKYGYGGDFGETLHDGNFCMDGLVSQQRVPHSNLLEVKNVNRPVR
                     AELKAGKIWLKNQLDFSDLADYLTVHYCFSENGETTLQGQCLVNCQPNQTACLPLTLP
                     EPNGKLQLLTLDYSLNESTALLEKGHHLGFDQITLHQAMVTPALNPRPQAVIFVQDFA
                     NEWRIQQGDYRYTFDKLKGIFSRIEKNGEAVIEQPLDFNIWRAPTDNDRLIREFWKKA
                     GYDNCYTRAYHTELMQDKNGVNITAECGIVATAQSRILTLKVNYHLAPNGEMTIQVQA
                     TRPAHLPFLPRFGLRFFLNKRNNQVSYFGYGEQESYIDKYHLAKLGAYQTSARENHTD
                     YLKPQENGSHFGTHYVQANGITVTSPQPFSFNLSPYTQEELTTKSHSYDLVESPSTVL
                     CVDYKMSGIGSNSCGPNLKPQYRLNETNFEWLLKLSF"
     gene            5079..5936
                     /gene="menB"
                     /locus_tag="PXD69_000399"
     CDS             5079..5936
                     /gene="menB"
                     /locus_tag="PXD69_000399"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005723289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDL6282637.1"
                     /translation="MLYPSEEFLYAPVEWVDHSEGYTDIRYHKSKDGIAKITINRPEV
                     RNAFRPQTVKEMIEAFSDARFDEKIGVIVLTGEGEYAFCAGGDQKVRGDYGGYKDESG
                     VHHLNVLDFQRDIRTCPKPVVAMVAGYAIGGGHVLHMLCDLTIAADNAKFGQTGPKVG
                     SFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLINTVVPYADLEKETVRWC
                     REMLQNSPIALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKREP
                     DFSKFRRNP"
     gene            6019..8421
                     /gene="mrcB"
                     /locus_tag="PXD69_000400"
     CDS             6019..8421
                     /gene="mrcB"
                     /locus_tag="PXD69_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1B"
                     /protein_id="HDL6282638.1"
                     /translation="MSDVELNEQSEQEPEQKPKKRNYFLSTLFKIGVIGACSMAFYGI
                     YLDGKIRSKMDGQIWELPAEVYARIESIKIEDNLTLEQTKQALLDNGYRQVSQVATPG
                     DFKIEENQLVLLRRAFPFPETPESQRVLRLTFKQDKLTYIEDLVQGKLIEEFRLDPKL
                     LALLHSDSDEERQALRLQQYPRLLIESLILTEDRRFYQHDGISPIGIARALITNYQAG
                     RTVQGGSTLTQQLVKNLFLSNERSLVRKVNEALMSVILDFRYDKNRILETYLNEIYLG
                     QNGSYQIHGFALASQFYFGRPIQEISLDQIALLVGMVKGPSLYNPWRNPQGAVERRNV
                     VLRLLLDHQVINQELYALLSSRPLNIREKGTIYREQPAFMQALTIDLKNELGEIKSAQ
                     LSGTKIFTTLDRKQQRSAEQAVITGLEDLESKNKKVSDLQSAIVVAEYRTGKVRAIVG
                     DRLTQFAGFNRAIQSKRQIGSLVKPSVYAIALAQPELFRLNTPIQNKQISIKVGSTYW
                     TPRNYDRSFSGSVMLMDALVRSLNIPTVNIGMKVGLKKVIAKQKEMGWDNAEIPPYPS
                     TLLGSYSISPYDVTRSYQVIANEGLKTPLTTIEAIISHNGEMFYQRDSGKVSEQVLPP
                     EAAVQTMYAMQQVVERGTARSLQNDFAKLKLAGKTGTTNNARDTWFVGIDGEHVTTVW
                     LGKDNNGDTNLTGSSGALYVYKQYLERALPQAYRLPKLNTMQWVGINSYGSWNCDSGR
                     QIPVWRDKGQRYCTSAGNVVATEKPSVWDALSLKKENIEAKAEEAEGKQPIPTEEVAP
                     IE"
     gene            8596..9102
                     /locus_tag="PXD69_000401"
     CDS             8596..9102
                     /locus_tag="PXD69_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDL6282639.1"
                     /translation="MAMSNIGLDKEIAKKLADELNGLLATYQVFYTNVRGYHWNVRGV
                     NFFELHAKFEEIYDDLVTKVDEIAERILTLGHTPQNAFSQYLTKSQIQEHIGVSAAQE
                     CLRGTLNGFKTLLGQQREILALANDANDEGTASQMSDYIKEQEKLVWMFTAACAECSD
                     YAQGCSCN"
     gene            9161..9874
                     /locus_tag="PXD69_000402"
     CDS             9161..9874
                     /locus_tag="PXD69_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDL6282640.1"
                     /translation="MAMSQGFQFKQFFIRHDRCAMKVNTDGILLGAIAHIKDCQNILD
                     LGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQGDVMQQ
                     AFEQKFDLIVSNPPYFADSLAARTTERDLARSISHYSHLNWLAKAKPWLAENGKITLI
                     LPIAAAEKLVDQSEQIGLYCVEQWLIFTKSGKLAKRSIVSFSLNKQKREHKELIIYDL
                     DNCYTTEFKRLTQDFYLNF"
     gene            complement(9985..10989)
                     /locus_tag="PXD69_000403"
     CDS             complement(9985..10989)
                     /locus_tag="PXD69_000403"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005651072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDL6282641.1"
                     /translation="MAFNLKNRHLLSLVNHTEREIRFLLDLARDLKRAKYAGTEQQKL
                     KGKNIALIFEKTSTRTRCAFEVAAYDQGAHVTYIDPNSSQIGHKESMKDTARVLGRMY
                     DAIQYRGFKQSVVQELADYAGVPVFNGLTDEFHPTQMLADVLTMIENCEKPLSQISYV
                     YIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEDAFVKMCEKFAAESGARMTVTED
                     IETAIKGVDFVHTDVWVSMGEPLESWTERIDLLMPYRVTPELMQATDNPKVKFMHCLP
                     AFHNSETKVGKEIAEKYPALANGIEVTEEVFESPMNVAFEQAENRMHTIKAVMVASLA
                     "
     gene            complement(11077..11916)
                     /locus_tag="PXD69_000404"
     CDS             complement(11077..11916)
                     /locus_tag="PXD69_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HDL6282642.1"
                     /translation="MQSYPYLLVNVFATSHFGGNPLAVFYEADGLTDLQMQLIARQFN
                     LSEVVFIQSSTDSQAVKKLKIFTPDYEMPFAGHPTVGAAFVLHSAFDFPTTYRLQTNA
                     GLVAIQHQHNVTTFALTNGVNLENTPLSRAECASILGLNVADIASEPCYVNTGVEQLL
                     VELASQQAVEKCKINANLAEKAFLKDSVYVWCREGNEAKVRLFFQSQGSIVEDPGTGS
                     AAANLGGWHIAQGKIPIQLQISQGDEIQRPNRLLLKVDQNGKIFVGGEVILVGKGEFY
                     LPE"
     gene            12106..13440
                     /locus_tag="PXD69_000405"
     CDS             12106..13440
                     /locus_tag="PXD69_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL6282643.1"
                     /translation="MLYAEFLLLLAFLYAGSRYGGIGLGVVSGIGLFVEVFFLGMPLS
                     APPISVMLVILAVVTCASILEAAGGLKFMLQVAERILRSNPKRITFLGPLVTYLMTLM
                     LGTGHSVYSIMPIIGDIALKNKIRPERPMAAASVASQLGITGSPLSAAVAYYLTEIVK
                     LPGFEGVTLLNVVGVTITATFCGVIAMSLYSLRRGKELEDDPEYQRRMQDPELRKQIE
                     QTSATSLDEKLPASAKNSVYLFLAAIATIVIIAMIPAIKPTVAATGKVAGMDQIIQIV
                     MLTFGGLILILTKTDPKKVPNGIVFKSGMVATIAIFGIAWMSDTYFTHAMPAFKEGVT
                     EMVRAQPWTFAFALFAVSVVVNSQAVTAKMLLPVGIAMGLPAPLLVGLMPATYAYFFI
                     PNYPSDIATVNFDVTGTTKIGKYYFNHSFMAPGLVGVITACIVGIAVANVLI"
     gene            complement(13520..13930)
                     /locus_tag="PXD69_000406"
     CDS             complement(13520..13930)
                     /locus_tag="PXD69_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL6282644.1"
                     /translation="MNSTLTNLQPLAFLITRVVAGYMFLLHGTAKFFEFPMSMTNGNG
                     SVPLASIYGVGGILEIVGGIFFILGLFTRQTAFILSGMMAYAFFIAHGAQGNVLLPLL
                     NGGELAGVYSVLFLTYIFIGGGKYSLDAKLFNKA"
     gene            complement(14053..14730)
                     /locus_tag="PXD69_000407"
     CDS             complement(14053..14730)
                     /locus_tag="PXD69_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL6282645.1"
                     /translation="MNLFGFRCFHCNHPLAIGVQGICSHCQKLLKPTPYCRHCGMSAV
                     EFRNACGYCLKNEPKWHKLVRVNEYRAPLSHWVHQFKFQQQYWWDQALARQLLLAIKQ
                     AQREQVLSLPEVIMPVPLFWHRHWKRGFNQSELLCDWLSKWLQIPLDTQSLQRVRATV
                     SQRELTAAERRKNLRGAFFYQPLKAYKRVAIVDDVLTTGSTLNVICAELLKAGVVEIQ
                     VWVLARA"
     gene            14848..15660
                     /locus_tag="PXD69_000408"
     CDS             14848..15660
                     /locus_tag="PXD69_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL6282646.1"
                     /translation="MKSLQKPIKIVFFDIDDTLYVKHKAYIPKSITEQVLPRLKAKGI
                     IPAIATGRNHGCFPEALKPYLNPEIGFELFVTINGQYNFYKDQIISDYSLSREQIERI
                     IEKANALGILYAFITPMTIAVSETNPIVHEAVLPITPNYLIDPHYYEKEKIVQMLLFY
                     TEEQKQAVENSGIFANDLKEARWHPNAVDILRKENSKARGIQDVLATLNIEIESAMAF
                     GDGINDLEMLPTVGVGVAMGNGVPELKAVADFITKPLEEDGILYALETLEVI"
     gene            complement(15708..15977)
                     /locus_tag="PXD69_000409"
     CDS             complement(15708..15977)
                     /locus_tag="PXD69_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL6282647.1"
                     /translation="MGLLYLLLLNTLIGYGSYGEALNHWDTSKVSIVTTMLPIFTMIF
                     SNLSYYFYPHIFAKPDMNWISYLGALVVVSGAILAIAGDKLFRRN"
     gene            complement(15950..16627)
                     /locus_tag="PXD69_000410"
     CDS             complement(15950..16627)
                     /locus_tag="PXD69_000410"
                     /inference="COORDINATES: protein motif:HMM:NF013088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6282648.1"
                     /translation="MKQRPLLGFSLALTAAMTWGTLPIAAQQVLKVIDAQTLVWVRFV
                     VASVGLLLILGFAKRLPKLTACSKKELGLILLGVCGLSANFFLFAEALHYVSPTINQV
                     LWQLAPFSMILLGVLLFKEKFGLFQKIGFVLLIAGLVAFFNDKFAEILQLNTYALGVL
                     LSAGASLIWVLYGVAQKLLLAKFNSQQVLFIIYIGCSLLMLPFASPAQLGNLEDGFLW
                     GCFIYCC"
     gene            complement(16729..16986)
                     /gene="rpmA"
                     /locus_tag="PXD69_000411"
     CDS             complement(16729..16986)
                     /gene="rpmA"
                     /locus_tag="PXD69_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDL6282649.1"
                     /translation="MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSIIAD"
     gene            complement(17007..17318)
                     /gene="rplU"
                     /locus_tag="PXD69_000412"
     CDS             complement(17007..17318)
                     /gene="rplU"
                     /locus_tag="PXD69_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDL6282650.1"
                     /translation="MYAVFQSGGKQHRVSEGQVVRLEKLELATGEKVEFDSVLMVVNG
                     EDVKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGIQ
                     A"
     gene            17596..18594
                     /gene="ispB"
                     /locus_tag="PXD69_000413"
     CDS             17596..18594
                     /gene="ispB"
                     /locus_tag="PXD69_000413"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HDL6282651.1"
                     /translation="MAVQLFSLEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYI
                     IAGGGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRP
                     TANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVLKVMSAATNALAEGEVQQLMNVND
                     PNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDI
                     LDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGKTTQAELIRNAIENGGELEQ
                     IPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEYKQALVSLAYLSVDRSY"
     gene            18697..19443
                     /locus_tag="PXD69_000414"
     CDS             18697..19443
                     /locus_tag="PXD69_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDL6282652.1"
                     /translation="MTEQNQRPQEHIESVRARRRAQNQKKGPNAPFVREKLTLPNGHN
                     KLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEENIRFAEKWGIP
                     FIDLDDDYENDRKEWFKKAKGMEWEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSC
                     LGISRWKDMNQINDCGHRAAAKFDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCG
                     CVYSLRDSNKWRLETGRQRIEIGKLYYSPD"
     gene            19860..20795
                     /gene="fabD"
                     /locus_tag="PXD69_000415"
     CDS             19860..20795
                     /gene="fabD"
                     /locus_tag="PXD69_000415"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDL6282653.1"
                     /translation="MSKFAMVFPGQGSQAVGMLADLAPQYPIVEETFKQASDVLGYDL
                     WDLVQNGTAEELGQTHRTQPALLASSVALFRIWQQKFPEQKPAVMAGHSLGEYSALVC
                     AGVLDFQDAIKLVELRGRAMQEAVPAGSGAMFAIIGLDNESIIKACEQAASETGEIVS
                     AVNFNSPGQVVIAGTKAAAEKAGELCKAAGAKRALPLAVSVPSHCALMKPAAEKLAEA
                     LQNIELNQPLVPVINNVDVAVETDADTIRNALVRQLYSPVRWTETVEKMAQDGITTLY
                     EIGPNKVLTGLAGRIVKELSAKAVNDVASFEAVEA"
     gene            20812..21276
                     /locus_tag="PXD69_000416"
     CDS             20812..21276
                     /locus_tag="PXD69_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282654.1"
                     /translation="MSKETLFMLISALIALVILPLAYTVGIAKETLGGNMGMLSIAAG
                     CSFLAYFLSLNPKIRHAFIGGSAITAAAIQAWVLYGVLLSENDPKSAVVLFQIYLFSS
                     LGPLFFSAIWAFTRPRWIYPKQGSAVKYALFGGLTTVINYLITLFIFYILTL"
     gene            21297..22019
                     /gene="fabG"
                     /locus_tag="PXD69_000417"
     CDS             21297..22019
                     /gene="fabG"
                     /locus_tag="PXD69_000417"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL6282655.1"
                     /translation="MSKIALVTGATRGIGKAIAEELVAKGYIVVGTATSEKGAESISA
                     YLGENGKGLVLNVADAESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFD
                     IIQTNLTSVYRLSKAVLRPMMKKGGRIITIGSVVGSMGNPGQTNYCAAKAGLVGFSKS
                     LAKEVASRGITVNVVAPGFIATDMTDELTEDQKNAILSQIPAGELGSPQDIAKAVAFL
                     ASDDARYINGETIHVNGGLYMS"
     gene            22138..23436
                     /gene="brnQ"
                     /locus_tag="PXD69_000418"
     CDS             22138..23436
                     /gene="brnQ"
                     /locus_tag="PXD69_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDL6282656.1"
                     /translation="MTRNTLVVGFLLFAIFFGAGNLIFPPKLGYESSTEFFSAISGFV
                     LTGVGLPLLGIIVSAFYNGGYKSALDKIHPWFSLAFLTSIYLAIGPFFAGPRTAATAY
                     EMAIMPFLGDSSQVSMLIFTLIYFAFTLWLALNPNKMVDRIGAILTPILLITIIGLVI
                     RAGFILDTDPQITTPNTNEQSYFFKGMVDGYLTMDALASLAYSVIVLNAIRGKGVSQA
                     ALQRQTVSAGLVAAVALAVIYISLGWIGNNMPISANTLSMLSERKLDLGTYILNTVTT
                     QAFGELGRSVLGVIVSLACLTTAVGLAVSVSEYFNEIFPKISYKVYAILFTVISFTVA
                     NQGLKEVISKSIPVLLVLYPIAMTVILMLLINLVIKLPLSAQRLSLLLVTIVAIASVA
                     GVGFTENLPLKSYSMEWLPFAIIGAIIGAIIHPLTGRKHK"
     gene            23482..24306
                     /gene="mutM"
                     /locus_tag="PXD69_000419"
     CDS             23482..24306
                     /gene="mutM"
                     /locus_tag="PXD69_000419"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDL6282657.1"
                     /translation="MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQM
                     AGAKITAVERRAKYLIIRTDKGDILVHLGMSGSLGILQERQQKEIGKHDHVDLITQNG
                     TILRYNDPRKFGCWLWAEKAEDHELLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFI
                     MTNEVVVGVGNIYACESLFMAGIHPELAAQNLTKKQCERLVKTIKEVLTKAIIQGGTT
                     LKDFIQPDGKPGYFAQVLQVYGRKGETCNDCGKPIETKVIGQRNTYFCPKCQRLPK"
     gene            complement(24389..24823)
                     /gene="dtd"
                     /locus_tag="PXD69_000420"
     CDS             complement(24389..24823)
                     /gene="dtd"
                     /locus_tag="PXD69_000420"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDL6282658.1"
                     /translation="MIGLIQRVKFAKVEVEGQVVGEIASGLLVLLGVEKDDDEAKADK
                     LLEKVLNYRVFSDSEGKMNLNVQQAGGSLLVVSQFTLAADTNKGLRPSFSKGASPVDA
                     ERLYAYFHQQAATKIHTQTGQFAADMQVSLQNDGPVTFWLQV"
     gene            complement(24798..25643)
                     /locus_tag="PXD69_000421"
     CDS             complement(24798..25643)
                     /locus_tag="PXD69_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HDL6282659.1"
                     /translation="MLNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLF
                     SIFTFFPIFHEANEQLKAFIYDNFAPSASEMVSEYIELFVSNAKQMGLVSFIGLFVVT
                     IMLIKSIDEALNTIWHDNRQRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFN
                     GNGALSLGQHLLELMPFLLIWLLFTLVYKFIPIRKVKFQHAAIGALMAAIFFTLGKKA
                     FIWYITAFPSYQAIYGALAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDKGSINDR
                     LNSAG"
     gene            complement(25645..26883)
                     /gene="proA"
                     /locus_tag="PXD69_000422"
     CDS             complement(25645..26883)
                     /gene="proA"
                     /locus_tag="PXD69_000422"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDL6282660.1"
                     /translation="MQMIELAQQAKQASFELAQFGNLQKNQALLTIADSLEQRAEEIL
                     YANAKDIEFAQAQGISLAIIDRLLLNEDRLKDIANDVRNVAKLADPVGQVMDGGVLDS
                     GLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVDVV
                     QDALEKAGLPKLAVQAVTDPDRALLLELLKLDRYIDMVIPRGGAGLHQFCKENSTIPV
                     IVGGIGVCHLFVEKTADQEKSLEVIANAKTQRPSTCNTLETLLVEKAIAVEFLPKLVA
                     KMQQLGVTIHSNDLQKIEGIEPLDQAKLSQEWLSLDLNVVVVNDLQQAVEHIRHYGSQ
                     HSEGILTSDYQLARQFVQQVDAAAVYINASTRFTDGGEFGLGAEVAVSTQKLHARGPM
                     GLEALTTYKWVCEGDYLVRG"
     gene            27167..29050
                     /gene="mutL"
                     /locus_tag="PXD69_000423"
     CDS             27167..29050
                     /gene="mutL"
                     /locus_tag="PXD69_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDL6282661.1"
                     /translation="MINTTPKQLIHILPPQLANQIAAGEVVERPASVVKELVENSLDA
                     GANTIQIDIEKGGSQLIRIRDNGCGISKQDLPLALARHATSKISSLEDLEAILSLGFR
                     GEALASISSVSRLTLTSRTAEQTEAWQAYAQGREMAVEIQPASHPIGTTIEVANLFFN
                     TPARRKFLRTDKTEFAHIDEVVRRIALAKPNISFSLSHNGKIVRQYRKVQDNSVEQQQ
                     KRVAAICGDEFIQHSTYIDRQHGDLHLHGWVGSPALARLQNDLCYSYVNGRMMRDKTI
                     NHAIRQAYGDSIASGYYPAFVIFLDLDPTMVDVNVHPAKHEVRFHQGRLVHDFILQGV
                     LNSLQQTQPTLELRNEVNEPLPSYVQDTNRQAAGQNIFVSQTAPQAAEFTQKNASRSS
                     YTPKFERSNSVSSSAQKWYKELVGGDLHQTTPTIKTQSTLVEPKTEPQTEHKTEAVSQ
                     KITQIAPLASHHSQALAIVKNQAVLIKEEENFYLLPLATLAELKLKLQLEKGQSQALL
                     IPLNLSLDQQQTERWQQTKEELTKLGFSISEKQWQAQTRLTVLSVPQAVREQNLQQLL
                     FALFNQTQAVNLAEFFAKKCEKPTACTLSDVIALLSEIELYANGKKELEGIRKEVDFS
                     KFL"
     gene            complement(29069..29338)
                     /locus_tag="PXD69_000424"
     CDS             complement(29069..29338)
                     /locus_tag="PXD69_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL6282662.1"
                     /translation="MREIEYSNAFKRDYKKCAVESLSSSLIEALYFLINDKPLPEKYC
                     DHALTGEWKGFRDCHIQPDLVLIYRKVEDDKLELLRIGSHSHLFG"
     gene            complement(29325..29591)
                     /locus_tag="PXD69_000425"
     CDS             complement(29325..29591)
                     /locus_tag="PXD69_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL6282663.1"
                     /translation="MANSALVSVRISPEIKEQASEVLAGIGLTVSDVMRMTLAKIATE
                     KRFQFDYQPNFETAEVLRAVKNGEEKLHSANSIADLMEQLNARD"
     gene            30031..30984
                     /gene="miaA"
                     /locus_tag="PXD69_000426"
     CDS             30031..30984
                     /gene="miaA"
                     /locus_tag="PXD69_000426"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDL6282664.1"
                     /translation="MNKKPLALFLMGPTASGKTDLAIALRQELPVEVISVDSALIYKG
                     MDIGTAKPSKEELALAPHRLIDILDPAESYSAMNFHADALREMADITSQGKIPLLVGG
                     TMLYYKALLEGLSPLPSADPAIRAEIESRAAQHGWATLHQELVKIDPIAGARINPNDS
                     QRINRALEVFYITGKTMTELTAQQGEALPYNILQFAIAPQDRAVLHQRIEQRFHKMIE
                     LGFEEEVKRLFLRKDLHINLPSIRCVGYRQMWEYLQGDISLDEAIFKGICATRQLAKR
                     QITWLRGWQGELTWLDSLAPTSSKAKMVEKIDHYLKNCDNI"
     gene            31053..31325
                     /gene="hfq"
                     /locus_tag="PXD69_000427"
     CDS             31053..31325
                     /gene="hfq"
                     /locus_tag="PXD69_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDL6282665.1"
                     /translation="MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPARALSHNNNNQAQHAQPAAEVTEQAE"
     gene            31345..32730
                     /gene="hflX"
                     /locus_tag="PXD69_000428"
     CDS             31345..32730
                     /gene="hflX"
                     /locus_tag="PXD69_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDL6282666.1"
                     /translation="MLNESLPNSEENSAFGFALSEASQTTEAASPTDPENQDKAILVH
                     LYLGQHKDVENLLEFKTLAESAGVEVLATLTTSRQSSHIKYYVGQGKAEGIAEAVERL
                     GATVVLVNHQLSPAQTRNLQSLCGCRVVDRTGLILDIFAQRARSHEGKLQVELAQLRH
                     LSTRLVRRVTNQDQQKGGAVGLRGPGETQLETDRRLIKVRIQQLLNRLEKVSKQRNQN
                     RKTRQKADIPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRIQVQDVGT
                     TILADTVGFIRFLPHDLVSAFKSTLQETTEATLLLHVIDGSDERKNENIDAVNQVLDE
                     IGALDIPTLLVFNKIDKLEGVEPHIERNADGTPVAVYLSAQENSGIELLFQAIQERLR
                     SNLVCENLLLPVTAGAIYAQFKAENCIKTEHFNEFGERIISIEINEVQWNKWVKQFPD
                     LAEYIELAKWG"
     gene            complement(32952..39023)
                     /locus_tag="PXD69_000429"
     CDS             complement(32952..39023)
                     /locus_tag="PXD69_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL6282667.1"
                     /translation="MNKIFKVIFNQTTQKMEVVSELARSQGKAASSTDKRGTIKLAAA
                     SILGGATLISGMAAFMLSATPAEAAVIIDRIEVQQKAPKKVVNGGIDIYTNTSLATDS
                     ITNPYNYFNPGSLSYADRTKLQESNNSVNKEKDSRLLYKSNTTSAIVIGHNAVALDNN
                     RKSRGKPKASGIAIGDYSYSGGGLSIAIGSFSRTASIGSVALGTSARAEGFNSFAAMR
                     QSAAIADYSTAIGSTSWANATASFAIGASATALGDRSFAIGSGTPQTVDGSYGHENRR
                     SIYDGQNNTLAFGTDAFSIGTKAKTNGNHSFAIGTNAWSGGFKLENSNISELGQVINP
                     DTAKVANNAFALGTNTRANSNDTLAFSTNASATGDGSIAFGVNSNTTGIGAIAFGNAS
                     KAWKSNAISIGWNANSHAEKVISIGSHSNASKDGAMAIGDTANSSGNNSVAIGYSANV
                     SKANATAVGTRANITHEGGTAIGFEAKSKGNYATAIAYNSTAKGKNSIAAGVNSTVSG
                     IRAAALGYNNTVSGKDTFVLGSNVTVKTKGSVILGSDSTEATATKEDTATVGTLKYSS
                     FAGDENVVDGDYVSVGNATNARQIKFVAPGKIASNSTDAINGSQLYAVADTLVKTGFN
                     ITADHSGLGGGAKEDNVKLGETVKYTSTDKNVVTTVTNNTIDFGLSDNISVGGKPGKD
                     GSVGVKGADGKDGVTIKPEAIVFHGVDGVNGKDGKDGKASIKVEKGAKGLDGNDGKDG
                     ESKTRIVYEKPNGDKEEVATLNDGLKFGANDGKVHDAKLNTQVDIKGATTNTDWAKFD
                     AGKNIMTQVVGNTITVALAKDLAGLDSATFGTQGDSTVINKDGVTIAKKDPNDATKSN
                     VTLTEDGLSNGGNQITNVDSGLKGKDGQPVKLTEAAGDVLNNAVNVGDLKNTVTETVT
                     EVTTDAFGLKDENNKEFKQNLGTTAKIIGDGNVKTNVVEKDGGHALEVSLVNNITVGK
                     DGEPGKVGIAGKDGKDAIALDGKDGAITVGRPGKDGIDGTIGVNGKDGSAVVLNGKDG
                     SIGLNGTNGKDGLTIKGTEGKPGLVGKDGLPGKDGVTRIQYQPTDGNGDPIGEPEQVA
                     TLNDGLHFKGDDATLVSKKLNETLEIIGGADKDKLTANNIGVNSKDGKLSVQLAKDLK
                     DLNSATFKPQDGENGQEGKGPTTVVNNNGVTITPKDGTDGKAVKLTEDGLDNGGNQIV
                     NVKSGIDGLAGKDGINGKDGKPITSVNDLTDDQLKEVGTNAANINDVVNASNDIIEKG
                     FSIAADNGETDHVKLGETVKYTSKDKNIITTVSDNVIDFTLNNDFTIGGPGKDGSIGV
                     KGADGTVGVTLNGKDGSIGLTGPKGADGKDGASATISVKDGAKGLDGNDGKDGESKTR
                     IVYEKPDGTTEEVATLNDGLRFVGDDGKEIVKKLNETLKISGGDTDLTNLSDNNIGVV
                     NNNGALTVKLAKDIDLTKDGSVTIGDTTVNNDGLTIKDGPSVTKAGINAGDKKIINVQ
                     DGEISATSKDAVNGSQLYQVQEVANAGWNLTANGKDKGNVKPGATVDLNNKDGNIIIT
                     KEGNNVTFGLKNNLTIGGKDGKDGQIGIAGKDGKDGVTIKGDGTITAGRDGKDGVDGS
                     IGATGKDGASVVLNGKDGSIGLTGPKGADGKDGASANIAVKDGAEGVDGTNGKDGLPG
                     ENGKTRIVYETKDKDGKTVTEQVATLNDGLIFSGNNEDVKNRQKLNTEVKVKGEGVDK
                     TASENFKSASGNINVKANGTDTLEVQLAKAIDLTEDGSVTTGDTTVNNNGLTIKDGPS
                     VTKGGIDAKGTKITNVKDGDVTATSKDVVSGSQLYNAMQNTGWYLTVDGNVAETSEKG
                     AQRVNNNGKVAVSGGKNIVVSRKGSTVEVATSSNLEFDSVKVGGTTISSTVAKDGVNE
                     LNIAGSKNAQTRITNVAPGVKGTDAVNVNQLKGAENRLNNRISNVDKDLRAGIAGALA
                     AGNLYHVTQPGKSMVSAGVGAYRGQGAIAVGYSRLSDNGKVGIKFSVNSNSRGDTGAA
                     ASVGYQW"
BASE COUNT        11521 a         8524 c         7832 g        11377 t
ORIGIN      
        1 ttttcatagg caggagatct attatgctaa gtaagctaca acgctttacc ttaatgataa
       61 aaagcaccat cattaagcat ccactggaaa ttttattcgt tacttacgtc acgattttac
      121 ttatcaataa tgtgagcgac tacgaattaa tcaaacgctt tcaaaatcta attgctcttt
      181 ttcctatttg ctttattttg ctttacctga tacgcgatac caaagcttat tggctattcg
      241 ctccgattcc gatagcaatc gtctttttct ttggtcaaat taatttaaca ttattggaag
      301 attctcgtta ttgggctacc atattttgtg tattcctttg tttgatcagt caatattggt
      361 acaaaaacaa ccattatttt gtagccggaa caactaataa attagttaac attgtctttg
      421 ctacagtttt atctggcatt atttttgcaa cattaagcgc tattaccata gccattattg
      481 ctttatttga tttaaataaa caaaacaact ttcatatttt tgaaaaattt ggcatttttt
      541 ctagtttttg ggcattccct gttttatttt taactcttga acaacagact accaatgatt
      601 ctagatatct aaaccgcatt agtgaaatgt tactaaactg gattttgtct ccggcattaa
      661 ttatctatac tgcaattatt tatgcttatg taatttttat tgcggctaag gggcaaatgc
      721 cagatggggt tgttgcaaac gtagcgcttc cctatttagc tttcggccta gctatacaag
      781 cggtgcaatt attactaaaa aatgcaaaat ggcagtggtt ttattctcac tttacctatt
      841 tagcactttt gccgttaaca ttaatttggt atgccatcta tattcgtttc agccattatg
      901 gcttaactga agcccgtatt tatttagtga ttggcacaat aaccttatct atttgctata
      961 ccttattact atttaaacag ttggcgcaat atcgtctctt ttctgcagtg tcgatagcaa
     1021 ttattttaat ttcagtgttt attttagatc cgaaaacagt tgcgcttaaa gatcaaacca
     1081 agcggttgga caactatttg ctaaaacaca aattattaga tgtaaataac aaaatcagca
     1141 caaaagctgt acttaaatac caagaatcat taaatgaaaa ccgagatgaa gccgaatatt
     1201 tttattcaat gctccactat gttgccagag gaatgcctgc tgcacaattt aaagagaaat
     1261 atggcgtaaa ttcaagctac gatttaatga gtgaaataag agaaagaaat actgacccac
     1321 gttattttga agctactaat tctgagctgg ttcgcttaac taaagcagat atggcaaatg
     1381 ctcgtgaata tattacattt agtagccaat tatatcggcc taattcattt tcccatcaaa
     1441 aaatagaaaa taagctatgc caaaaactcc tttctcaagg ttactatttt gagggaaata
     1501 tattaaatat tgagtatcaa tactcagaaa cggctcaaga ctgctcttca ataacacaag
     1561 atcctactga atttgttatc tactttaaag gacttgggac tactattgaa tttaacatta
     1621 acgatatttt gaaaaaaatc tttgctaaac atcagttatc tattacccag caacacaaaa
     1681 atgaggtttt agaaaagatt aaaggcgatt tactcaaaat ggatttagga aattcagtac
     1741 ttgggcttaa gcatattgag ttaagatttg aagacaatat cggctatata gtagaaagta
     1801 ttagtacaca atatattatg ctgaaataaa aggagatgct cgttcaatta aatttgaacg
     1861 agcatttttc gttaaaaact caatttaagc agccactcaa aattagtctc atttaaccga
     1921 tattgcggtt tcaaattcgg gccgcaagag tttgagccaa tgccgctcat tttgtaatcg
     1981 acacacagca cggtggaagg gctttctacc aaatcataac tgtggctttt agtggttagc
     2041 tcttcctgtg tgtaaggcga aagattaaaa ctaaacggct gtggagaagt aacagttatc
     2101 ccatttgctt gcacataatg cgtaccgaaa tggctgccgt tttcctgcgg tttgagataa
     2161 tcggtatgat tttctcgggc gctggtttga taagctccga gtttcgccaa atggtatttg
     2221 tcgatataac tctcctgctc gccatagcca aaatagctca cttggttatt ccgtttattc
     2281 aagaaaaacc gcaagccaaa gcgaggtaaa aacggcaaat gagcggggcg ggttgcctga
     2341 acctgaatcg tcatttcgcc attcggggca agatgataat tcactttcag ggttaaaatc
     2401 cgactttgag cggttgccac aatgccacat tcggcagtaa tgtttacgcc gtttttatct
     2461 tgcatcagtt cggtatgata cgccctggtg taacagttat cgtagccggc ttttttccaa
     2521 aactcacgaa ttaagcggtc gttatcggtt ggggctcgcc aaatattgaa atccaacggt
     2581 tgctcaatta ctgcctcgcc gtttttctca atccggctga aaatgccttt gagtttatcg
     2641 aaagtgtagc gatagtcgcc ctgttgaatc cgccattcat ttgcaaaatc ttgcacaaaa
     2701 atgaccgctt gcgggcgtgg attaagtgct ggagtgacca tcgcttgatg cagcgtgatt
     2761 tggtcaaagc ctaagtgatg ccctttttcc aacagagccg tgctttcatt taaagaataa
     2821 tcaagggtta aaagttgcaa tttgccgttt ggttcgggca gcgttagcgg caaacaagcg
     2881 gtctgatttg gctgacaatt taccaaacat tgtccctgca gggtggtttc gccgttttcg
     2941 ctgaaacagt aatgcacggt cagataatca gctaagtcgc tgaaatccaa ctgatttttc
     3001 agccaaattt tgcccgcttt taactcagct cgcaccgggc gattcacatt tttcacttct
     3061 aacaaattag agtgtggcac acgctgttgg gaaaccaagc cgtccataca gaaattgcca
     3121 tcgtgcaagg tttcgccgaa atcaccgcca tagccgtatt tttcggtctt ctgttcggca
     3181 cttagctcag agttggggag cagaggagca tggtcgcacc attcccacac aaagccaccg
     3241 cacgcaccgc tgtagcgttg gaaggtttgc caataatctt ccatatcacc actcgaattg
     3301 cccatcgcgt gagaatattc acacaaaata aaaggtttgt ggttggcaga gtcggaaaaa
     3361 tattcctcta accgctcggt gcttgggtac atctcgctgt ataaatcgag gtttgaaaga
     3421 tcgttttgat gtgccgaatg ttggtaaatc gaaccttcgt agtgagttaa acggcttgga
     3481 tcccgttgtt ttacccaacg ggctgcgact tcaaaatttt caccaaagcc ggattcgtta
     3541 ccaagtgacc aaataatgac cgaagtgcgg tttttgtctc gctccacatt ggcaatgttg
     3601 cgatctaaaa tcgcctgttt gaacagcgga tctcttgcaa aataacagaa attatcgacc
     3661 gcttgttggc gaatttcttc ctgtttgttc gggtttggca cattcaggaa aatgctgttt
     3721 tccggacttt caatatacac tgcactggag ccgtgagatt caagatcact ttcggcaatc
     3781 agataaaaac cgagctgatc gcacaattca ctaaaccacg gagcgttcgg gtaatgggcg
     3841 gtgcgaatag cgttgatgtt atgggctttc attaagcgta aatccaccaa cgcttgctca
     3901 cggctaatgc tgtagccggt tttcgggtcg gaatcgtggc ggtttacccc tttaaattta
     3961 atcggggcgt tgttgaatag catcacgcca ttttccacac gaatctgacg aaagccgatt
     4021 ttttgctcaa taatttcgtt ttggtagctc aagcatagcg tgtagagtgt cggatcttcc
     4081 gcattccaca aacacaaatt gcaaatttct tggcaaaaat caccgcttgt ttgctcgcag
     4141 actaagcggt tttcagggtc gaaaagttga aaatgcacag cttcggtgta ggtggaaaat
     4201 tgtgtttcca ccttgagttc tgcctttgaa agatcagcgt ttaactggta gcggataaag
     4261 aaatcttgca ggtagttttg ctcacgttcc aaaatataaa catcacggaa aatgcctgac
     4321 attcggaatt tgtcttgatc ttccaaataa ctgccgtcac accattttag caccaccacg
     4381 acgaggctgt ttttgccctg tttaagctgt ttggtgatgt caaattcatt ggtgctgtgg
     4441 ctgatttgcc cgtagccgac aaattcgccg tttacataaa caaacaggca cgaatctacg
     4501 ccctcaaaat ttagcaaata gcgtttgtta ggcttggggt taaacgtgat ttcacgctga
     4561 tacaccccgc aagggttttg gtgtggcaca taaggcggat caaacggaat cgggtagttg
     4621 atgttagtgt attgatgggc atcaaagcct tgagtttgcc agttagacgg cacggggatt
     4681 tggtgggtaa atttggtgtt gaggaaatcc tccggcagat cgtgcggact tggatagaaa
     4741 ttaaacttcc aatcgccatt tagcaaagta aataactcag attgttcccg ttccaactga
     4801 ttcggcgttt gccctttagc aaaaggaata aaataagcgt ggtgtagcgt ggtattaagg
     4861 tgcaacacac tcgggtcttg gtagtaattc ggtaacgaca taaaagccct atgatcaaaa
     4921 agatataaat acgaatacac tttaattctc ttataaaata gggcaatcaa ctatgtgaaa
     4981 aattgtgagg cggatcacaa aataatttcc tcaccttttt ccttcgattc cgttataatc
     5041 acaagaattt tttatgtcat ttttcaagga atttaccaat gttatatcca agcgaagaat
     5101 ttttatatgc accggttgag tgggttgatc acagcgaagg ttacaccgat attcgttacc
     5161 ataaatcaaa agacggtatc gctaaaatca ccattaatcg tccggaagtg cgtaatgctt
     5221 tccgtccgca aacggtaaaa gagatgattg aagccttttc tgatgcccgt tttgatgaaa
     5281 aaatcggcgt catcgtatta accggtgaag gcgaatatgc gttctgtgcc ggcggcgacc
     5341 aaaaagtgcg tggcgattac ggcggctaca aagatgaaag cggtgtgcat cacttaaatg
     5401 tgttggattt ccaacgtgat attcgtacct gcccgaaacc ggtggtggca atggttgccg
     5461 gctatgcgat tggtggtgga cacgttttac atatgttatg tgatttaacc attgccgctg
     5521 acaatgcaaa attcggtcaa accggcccga aagtggggtc atttgacggc ggttggggtg
     5581 caagctatat ggcacgttta gtcggtcaga aaaaagcgcg tgaaatttgg ttcttatgcc
     5641 gtcaatataa tgcacaagaa gcgttagata tgggcttaat caataccgtt gtgccttatg
     5701 ctgatttaga aaaagagact gtgcgttggt gtcgcgaaat gctacaaaac agcccgattg
     5761 ccttacgttg cttaaaagca gcattgaatg cagattgtga cggtcaggct ggcctgcaag
     5821 agcttgctgg taatgcaaca atgttgttct atatgacaga agaagggcaa gaaggacgca
     5881 atgcgttcaa cgagaaacgt gagccggact tcagcaaatt ccgccgcaat ccataattga
     5941 cggcaaatac aagcggttcg attttgcaaa aaatttgcaa aaatcgaccg cttacctttt
     6001 ctaatttaag ttaattttat gtcagatgtt gagttaaacg agcagagcga gcaagagcct
     6061 gagcaaaaac cgaaaaagcg aaactatttc ctttcaacct tattcaaaat cggggtgata
     6121 ggagcttgca gtatggcttt ttacggcatt tatttagacg gtaaaatccg tagcaaaatg
     6181 gatgggcaga tatgggaatt accagctgag gtgtatgctc gtattgaaag cattaaaatt
     6241 gaagacaact taacgcttga gcaaactaaa caagcgttgc tggataacgg ctatcgtcaa
     6301 gtttctcaag ttgcgacacc aggcgatttc aaaattgaag aaaatcagct ggtgttgcta
     6361 cgccgagctt tcccgtttcc agaaacaccg gaatcgcaac gagtgcttcg tttaactttc
     6421 aaacaagata aattaactta tattgaagat ttggtgcagg gtaagttgat cgaggagttc
     6481 cgcttggatc cgaaattact ggcgttactg cattccgata gcgatgaaga acgtcaagca
     6541 ttacgcttac aacaataccc tcgcttgtta attgagtcac tgattttaac cgaagatcgc
     6601 cgcttttatc agcacgatgg gattagccca atcggtattg cccgtgcttt aatcactaac
     6661 taccaagctg gcagaacagt gcagggtggc agtaccttaa cgcaacagtt agtgaaaaac
     6721 ttgttcttaa gtaatgaaag atcgttggtg cgtaaggtaa atgaagcgtt aatgtcggtg
     6781 attttagact tccgttacga taaaaaccgc attttagaaa cctatctcaa cgaaatttat
     6841 ttagggcaga acggtagcta ccaaattcac ggttttgcat tggcaagcca attctatttt
     6901 ggtcgtccga tccaagagat tagcttagac caaattgcgt tattggtggg aatggtaaaa
     6961 ggtccatcac tgtataaccc gtggcgaaat ccgcaaggtg cggtagagcg acgtaatgtg
     7021 gtgttgcgat tattgctgga tcatcaagtg atcaatcaag aactttacgc tctgttaagc
     7081 tcccgcccgc ttaatattcg tgaaaaaggc acgatttacc gtgagcaacc tgcctttatg
     7141 caggcattaa ccattgattt gaaaaatgag ttaggcgaaa ttaagtcagc tcaactttcc
     7201 ggtactaaaa tttttacgac ccttgaccgt aaacagcaac gttcagccga acaagcagtg
     7261 attaccggtt tggaagatct ggaaagtaaa aataaaaaag tcagcgattt gcaatcggct
     7321 attgtcgtgg cggaataccg cacaggtaaa gtgagggcga tagtaggaga ccgcttaacc
     7381 caatttgccg gctttaaccg tgcgattcag tcaaaacgcc aaatcggttc tttagtcaaa
     7441 ccatcggttt atgcgattgc cttggcacag cctgaattat tccgtttaaa tacaccgatc
     7501 caaaataaac aaatttcaat taaggttggt tcaacctact ggacaccccg taactacgac
     7561 cgcagtttta gtggctcggt gatgttaatg gacgccttag tccgctctct gaatattcca
     7621 acggtgaata ttggtatgaa agttggctta aaaaaagtca ttgccaaaca aaaagagatg
     7681 ggctgggata atgcggaaat tccgccttac ccatcaacct tgctaggttc atattcgatc
     7741 tcgccttacg atgtaacccg ctcttatcaa gtaattgcca acgaagggct gaaaacacca
     7801 ttaaccacca ttgaggcgat tatttcgcac aatggcgaaa tgttctatca gcgagatagc
     7861 ggcaaagtga gcgagcaggt gcttccaccg gaagctgcgg ttcaaacaat gtatgcgatg
     7921 caacaggttg tggaacgagg tacggctcgt agcttacaaa acgattttgc caaactgaaa
     7981 ttagccggca aaaccggtac aaccaataac gctcgagata cttggtttgt gggaattgat
     8041 ggcgaacacg tcacaaccgt ctggctgggt aaagataaca atggggatac caacctcacc
     8101 ggttcaagtg gtgcattgta tgtgtataag caatatcttg agagagcctt gcctcaggcg
     8161 tatagattac cgaaacttaa tacgatgcaa tgggtgggga ttaatagcta tggtagctgg
     8221 aattgcgata gtggcagaca aattccagtt tggcgagata aagggcaacg ttattgtacc
     8281 agtgcaggta atgtagtggc tacagaaaaa ccaagtgttt gggatgcact ttcgctgaaa
     8341 aaagaaaata tcgaggctaa agcagaagaa gctgaaggga agcaaccaat ccctactgaa
     8401 gaagttgcac caattgaata aaaataaatt tgatagccat tatcattcaa gatacacaag
     8461 ctgatagatt ctacctataa aaagtatata ttataactat ttgctagttt tcattttgga
     8521 ttgtaatata gtaataaatt aaataagcag tatctaattt aattttttaa gattaacaat
     8581 taagaggagc atattatggc aatgtcaaat atcggtttag ataaagaaat cgcaaaaaaa
     8641 ttagcagatg agttaaatgg tttattagct acttaccaag tgttttacac taatgtacgt
     8701 ggctaccatt ggaatgtacg tggtgtgaac ttctttgaat tacatgcaaa atttgaagaa
     8761 atctacgatg atttagtgac aaaagtagat gaaattgcag aacgtatttt aaccttaggt
     8821 cacacacctc aaaatgcgtt cagccaatat ttaaccaagt cacaaattca agaacatatt
     8881 ggtgtttcag ctgcacaaga atgtttacgt ggtactttaa atggtttcaa aacattactg
     8941 ggacaacaac gtgaaattct tgctctagca aatgatgcaa acgatgaagg tactgcttct
     9001 caaatgagtg attacatcaa agaacaagaa aaattagtat ggatgttcac tgcagcttgt
     9061 gctgaatgtt cagactacgc acaaggttgt tcttgtaact aagttgcaat aatataatta
     9121 acccccgata atgaaagatt atcgggggtt actttttcag atagctatgt cgcaaggatt
     9181 tcaatttaaa cagtttttta ttcggcacga cagatgtgca atgaaagtca atacagatgg
     9241 tattctattg ggagcgattg ctcacataaa agattgtcag aatattttag atctgggtat
     9301 aggttctggt ttagtagcac ttatgcttgc tcagagaaca gatgattgtt gtcacattac
     9361 tgcgttggaa cttgaaccaa atgcctacca acaagcggtc gaaaatgccc aaaattctgc
     9421 atgggcaaat cggatttccg ttttgcaagg tgatgtgatg cagcaggcat ttgaacagaa
     9481 atttgacttg attgttagta acccacctta ttttgcagat tcacttgcag ctcgaaccac
     9541 agagagagat ttagctcgct caattagcca ttacagccac ttgaattggc tggcaaaagc
     9601 aaaaccatgg ttagcagaga acgggaaaat tacactgatt ttacctatag cagctgcaga
     9661 aaaattagtt gaccaaagtg aacaaattgg attgtattgt gttgaacaat ggttaatttt
     9721 taccaagagc ggcaaattgg ctaaacgcag tatagtgagt tttagtttaa acaagcaaaa
     9781 gcgtgaacat aaagagctga tcatctatga tctagataat tgttacacta ctgagtttaa
     9841 aagacttacc caagattttt atttgaattt ttaatttact ccccgggtta gtgttttcca
     9901 caaatcttct tcagctacga tgatctagcc ttaagctaaa aagcagatta ccacccaaga
     9961 taatccgctt tttagactta gctattatgc caaacttgct accattaccg ctttaatagt
    10021 gtgcattcga ttttctgctt gctcgaatgc cacattcatt ggcgattcaa acacctcttc
    10081 ggttacttca atgccgtttg ccagtgccgg atatttttcg gcgatctctt taccgacttt
    10141 agtttcactg ttgtggaacg ccggtaagca gtgcataaat ttcactttcg ggttgtcggt
    10201 tgcttgcatt aattcaggcg ttactcggta aggcattaat aaatctatac gttcagtcca
    10261 gctctctagc ggttcaccca ttgaaaccca aacatcagta tgcacaaaat cgacaccttt
    10321 aattgcagtc tcaatatctt cggttaccgt cattcttgcc cccgattcag ctgcaaattt
    10381 ttcacacatt ttcacgaatg catcttccgg taataaggct ttcggggcac aaattcgcac
    10441 gtccatcccc aatttcgccc caatcaacag gagtgaatta cccatattat tgcgagcatc
    10501 gccgatatag acataactga tttggctaag cggtttttcg caattttcga tcatcgttag
    10561 cacgtcagcc aacatttggg ttgggtggaa ttcatcggtt aagccgttaa acaccggcac
    10621 gccggcataa tcggcaagct cttgtactac cgattgttta aagccgcgat attgaatcgc
    10681 atcatacatt ctgcctagca ctcgggcggt atctttcatt gattctttat gcccgatttg
    10741 cgaggagttc gggtcaatat aggtaacgtg agccccttga tcgtaagctg ctacttcaaa
    10801 ggcacaacga gtacgggtcg aggttttctc aaaaattaag gcaatatttt tgccctttaa
    10861 tttttgctgc tcagtgccgg catatttcgc ccgttttaaa tctcttgcta aatccaacaa
    10921 aaagcgaatt tcacgctcag tgtggtttac taaactgagt aaatgtctgt tttttaagtt
    10981 aaatgccatt ttgtttctcc ctgtaaacat taaaatttat tttatgcaaa ataattgcat
    11041 aaaaattcac ttatagcaaa cagaatttgc ttaccctcat tcgggtaaat aaaactcgcc
    11101 tttgccgact aaaataacct ctccgccaac aaaaatcttc ccgttttgat cgacttttaa
    11161 taacaggcga ttcggccgtt gaatttcatc accttgtgag atctgaagct ggattggtat
    11221 tttgccttgt gcaatgtgcc aaccgcctaa atttgccgct gccgaaccgg tgccggggtc
    11281 ttcgacaatc gaaccttgcg attgaaaaaa cagtcgcact ttcgcctcat ttccctcacg
    11341 acaccaaaca tatacactgt ctttcaaaaa tgctttttca gccagatttg catttatttt
    11401 gcacttttcg accgcttgtt gagaagctaa ctcaaccaat aactgctcca cgccggtgtt
    11461 tacataacaa ggctcggacg caatatccgc aacattcagc cccaatattg aggcacattc
    11521 tgcacggctt agcggtgtgt tttccaggtt cacaccattg gttaaagcaa aagtagtcac
    11581 attatgttga tgttgaatcg ctaccaatcc ggcattagtt tgcaagcgat aggttgttgg
    11641 aaaatcaaag gcggaatgca acacaaaagc cgctccaaca gttgggtggc cggcgaacgg
    11701 catttcataa tcaggcgtaa aaattttgag ttttttgacc gcttgtgaat cggtggaaga
    11761 ttgaataaat accacttcag aaaggttaaa ttggcgagca ataagttgca tttgtaagtc
    11821 ggttaatccg tccgcttcat aaaatactgc aagcgggttg ccgccaaaat ggcttgttgc
    11881 aaacacattc accagcaaat aaggatagct ctgcatttat cactccttac ataaacttaa
    11941 agccacattg ggcgaaaatt ctaccatttt ggtggcgaat cgtaaaattg gaaaatttat
    12001 cggtatccct ctttagagtt aactattttt gatttatctc aaagttttaa aaaaaagatt
    12061 aggtcatact tctttctagt gattattttt taatttgagg ttcttatgct ttatgcagaa
    12121 tttttacttt tattagcctt tttatatgca ggtagccgtt acggtggcat cggtttaggt
    12181 gtggtttccg gcatcggctt atttgttgaa gtgttcttct taggaatgcc gctttccgct
    12241 ccgccaatta gcgtgatgct cgtgattttg gctgtagtta cttgtgcctc cattctagaa
    12301 gccgctggcg gtttgaaatt tatgttgcaa gttgccgaac gcattttgcg tagcaaccca
    12361 aaacgtatta cctttcttgg cccacttgtc acttatctga tgaccttaat gctcggcaca
    12421 gggcattcgg tttactctat tatgccgatt atcggtgata ttgccttaaa aaataaaatt
    12481 cgcccggaac gcccgatggc agcagcctct gttgcttcac aattaggtat taccggtagc
    12541 ccactttctg ctgcagttgc ctattactta accgaaatcg ttaaattacc gggctttgaa
    12601 ggggtgactt tattgaatgt agtcggcgta accatcaccg caaccttctg tggtgtgatt
    12661 gcgatgtcat tatatagctt acgtcgtggt aaagagttgg aagacgatcc tgagtatcaa
    12721 cgccgtatgc aagaccctga gctacgcaaa caaatcgagc aaacgagtgc aacgtcttta
    12781 gacgaaaaac taccggcaag tgcgaaaaac tcggtttatc tgttcctagc cgctattgca
    12841 accattgtga ttattgcaat gattccggct attaaaccaa cggttgctgc tacaggaaaa
    12901 gttgccggta tggatcaaat cattcaaatc gtgatgctaa ctttcggggg tttaatctta
    12961 attttaacta aaaccgaccc gaaaaaagta ccaaacggca tcgttttcaa atccggtatg
    13021 gtagcaacca ttgcgatttt cgggattgct tggatgagtg atacttactt cacccatgca
    13081 atgccagcgt tcaaagaagg ggtaacagaa atggttcgag cccaaccttg gacattcgcc
    13141 ttcgccttgt ttgcggtatc tgtagtagta aacagccaag ccgtaaccgc aaaaatgtta
    13201 ttaccggtag gcattgcaat gggcttgcct gctccattat tagttggttt aatgccggca
    13261 acttatgctt acttctttat tccgaattat ccgtctgata tcgcaaccgt taactttgac
    13321 gtaaccggta caactaaaat cggtaaatat tacttcaacc acagctttat ggctccgggt
    13381 ttagttggcg taattactgc ctgtattgtc ggtatcgccg ttgcaaatgt gctaatttaa
    13441 ttttaacaaa aaaacaagcg gtcagattaa gtaaattttt taccaaatct gaccgcttga
    13501 ttatttactg caaaaccaat taggctttgt taaagagttt tgcatctaac gagtattttc
    13561 cgccaccgat aaaaatatag gttaagaata ataccgaata cacgcctgct aattcaccgc
    13621 cgtttaataa aggtaatagc acattgcctt gagctccgtg agcaataaag aacgcgtatg
    13681 ccatcatacc tgaaaggata aacgctgttt ggcgggtaaa tagacctaaa ataaagaaaa
    13741 ttccgcccac aatttccaaa ataccgccta caccataaat ggaggcaagg ggtacactgc
    13801 cgtttccgtt ggtcatcgac attggaaatt caaaaaattt cgctgtgccg tgtaataaaa
    13861 acatataacc ggcaacaaca cgggtgatta aaaacgctaa aggttgtaaa tttgttaaag
    13921 tagagttcat ttgctttcct taaaataaat tgtgatataa aggtcaattg attgaggcag
    13981 gcattctatt ttaaaaacct atacttcaca atccagccgt catgaaatag attatttacc
    14041 attaataaac aattaggctc tcgctaacac ccaaacctga atttctacta ctccagcttt
    14101 gagtaactcg gcacaaatta catttaaggt ggaacctgtg gtgagcacat catcaacaat
    14161 cgccactcgt ttataggctt ttaacggttg atagaaaaat gccccacgca gatttttccg
    14221 ccgttcagca gcggtcaatt ctctttgtga gacggttgct ctcacacgtt gtaaactctg
    14281 ggtatccagc ggaatctgta accacttcga taaccaatca cacaataatt cgctttgatt
    14341 aaaccctctt ttccaatgtc tgtgccaaaa aagtggtaca ggcataatca cttcaggcaa
    14401 gctcagaacc tgttcccttt gagcttgttt gattgccagc agcaattgtc gggcaagggc
    14461 ttgatcccac caatattgct gctggaactt aaattgatgt acccaatgtg aaagtggcgc
    14521 tcggtattca tttaccctca ctaatttatg ccacttcggt tcatttttca aacaatagcc
    14581 acaagcgttt cgaaactcca ccgcactcat tccacaatga cgacaataag gggttggttt
    14641 tagcaatttt tggcaatggc tgcaaatgcc ttgcacgcca atagcgagtg gatgattaca
    14701 atgaaagcaa cggaagccga ataaattcac atttcctcct tttatttgca gattatcaaa
    14761 tttagcctta ttttttccgg ctatttttgt gacatcgctc gaaaaaagag taaaatctca
    14821 ttatcagtaa ataaaaagga aaccgagatg aaatccctcc aaaaaccgat caaaattgtc
    14881 tttttcgata ttgatgacac cctctatgta aaacataaag cctatattcc aaaatcaatt
    14941 accgagcagg tattacctcg tttaaaagcc aaaggcatta ttccggccat tgccaccggc
    15001 agaaatcacg gctgttttcc tgaagctctc aaaccttatt taaaccctga aatcggtttt
    15061 gagctgtttg ttaccattaa cgggcaatat aatttctata aagatcaaat aattagtgat
    15121 tattcgttaa gccgtgagca aattgaacgt attatcgaaa aagcgaatgc tttgggtatt
    15181 ctgtatgcct ttattacgcc aatgacgatt gcagtttccg aaaccaatcc gattgtgcac
    15241 gaagcggttt taccgatcac accgaattat ttgatcgatc cacactacta cgaaaaagag
    15301 aaaattgtgc aaatgttact gttctacacc gaagagcaga aacaagcggt cgaaaatagt
    15361 ggcatttttg caaatgattt aaaagaggct cgctggcacc ccaatgcggt agatattctg
    15421 cgaaaagaaa attcgaaagc tcgtggcatt caagatgtat tagcaacctt gaatattgag
    15481 attgaaagtg cgatggcatt tggcgatggt attaacgact tggaaatgct cccgaccgta
    15541 ggtgttggtg tggcaatggg taatggcgtg ccggaattaa aagcggtggc agatttcatc
    15601 accaagccgc ttgaggaaga cggcattcta tacgctcttg aaactcttga ggtgatttaa
    15661 aagcaagcgg ttgtaagttt ttctccattt acaaccgctt gtagtttcta attacgccta
    15721 aatagcttat cgcctgcaat cgctaaaatc gccccactga cgaccaccaa cgccccaaga
    15781 taactgatcc aattcatatc cggcttggca aaaatatgcg gataaaaata gtagctaagg
    15841 ttggaaaaga tcatcgtaaa aatcggcaac atcgtggtta caatgctaac ctttgaagta
    15901 tcccaatgat tcaacgcctc accgtatgaa ccgtagccaa ttaaggtgtt caacagcaat
    15961 aaataaagca accccacaga aaaccatcct caagattgcc taactgtgcc ggtgaggcaa
    16021 acggtaacat cagcagagaa cagccgatgt aaataataaa cagcacttgc tgagagttaa
    16081 atttcgctaa taataatttt tgagccacgc cgtatagcac ccaaatcaag ctggctccgg
    16141 cactcaataa cactccgaga gcgtaggtgt tgagctgtaa aatttcagca aatttatcgt
    16201 taaaaaatgc gacaagccct gcaatcaata acacaaatcc aatcttttga aacaagccga
    16261 acttttcctt aaacaataat acgcctagta gaatcatcga aaatggagct aactgccaca
    16321 atacttggtt aatggtgggc gaaacatagt gtagagcctc tgcaaacaaa aagaaatttg
    16381 ccgacagacc acacacccct aacaaaatta aaccgagttc ttttttgcta caagcggtca
    16441 atttgggtaa acgttttgca aatcctagaa tcagcaatag ccctactgat gccacaacga
    16501 acctaaccca aactaaagtt tgggcatcta tcactttcaa tacttgctgg gcggcaatcg
    16561 gtagcgttcc ccaggtcatt gctgcggtta atgcaagtga aaagccaagt aaggggcgtt
    16621 gtttcatcgt ggaaattcct ttttctattc tatgtttcta tattttagaa agattgagat
    16681 acaaaaaaac cccgccattg gcgaggtctc ttattgattt tgaaatgatt agtcagcaat
    16741 gatgcttaca tatttacggc ttttctcgcc tttcacttca aatttaactt taccgtcagc
    16801 agttgcaaat aaagtgtggt ctttacccat acctacattt gaacctgcgt ggaatttagt
    16861 accacgttga cgaacgataa tgctacctgc taatacagat tcaccaccga aacgtttaac
    16921 accaaggcgt ttagcttcag aatcacgacc gttacgagtt gaaccaccag cttttttagt
    16981 tgccatcttc tagatctcct ctgaaattat gcttgaatcc cagtgatttt cacttctgtg
    17041 aaccactgac gatgaccttg ttgtttacgg ctgtgtttac gacgacggaa cttaacgatt
    17101 ttaactttct cgccacgacc ttgtgctaca acttcagcca ctacttttgc acctgctaca
    17161 accggtgcac cgattttaac atcttcaccg ttaacgacca ttaacactga gtcaaattca
    17221 actttctcac cagttgcaag ttcaagtttt tctaaacgaa ctacttgacc ttcacttact
    17281 cggtgttgtt tgccgccact ttggaaaact gcgtacatat ttactccgct atgtgccaac
    17341 tgcttttgct tttaggcact aaattaattc ataaaaatag ggttgcaatt ctacggaaaa
    17401 agattcgaaa gagcaagagc gattttgaga attttttgaa atttgcaaaa aatggtaaaa
    17461 atactaccgc ttgtttcaac tgcgactaaa aaacaataga ctgctccgat tttacaacaa
    17521 aatcataatt cttttttgaa cacaggctaa attaaggtag aatctactca attttcgtct
    17581 tactttatgg attcgatggc tgtgcaactt ttttctttag aacaaattca agcccttgcg
    17641 aatgaagata tgcaagcggt aaatgccgaa attttagctc aacttaattc cgaagtgcta
    17701 ctgattaacc agctcggaca ttatatcatc gcaggcggtg ggaaacgtat tcgcccgtta
    17761 attgcggtgc ttgcggctcg tgccttgggt tatcgtggta aaaagcatat cacggcggct
    17821 gcttttattg agtttgtgca tactgctaca cttttgcacg atgatgtagt cgatgaatcc
    17881 gatatgcgtc gtggcagacc aaccgcaaac gcccattttg gcaatgcggc tagtgtattg
    17941 gtaggggatt tcatctatac ccgttcgttc cagatgatga cggatttaga ctctctgcgt
    18001 gtgttaaaag tgatgtctgc cgccaccaat gcgttggcag aaggggaagt tcagcaatta
    18061 atgaacgtga acgacccaaa caccactgaa gcgaactata tgcgggtcat ttacaataaa
    18121 accgcccgct tgtttgaagc cgccactcaa tgcgtggcga ttgcggctga tgcttctgag
    18181 gaaattgaaa ccgcattaaa aaattacggt tgctacttag gcacggcatt ccagctgatt
    18241 gacgatattt tagactactc cgctcaaagc gaaagtttag gcaaaaacgt aggcgatgac
    18301 tttgtggaag gtaagccaac cttgccattg ctccacgcaa tgcacgctgc cgacaaagca
    18361 ggcaaaacta ctcaagcaga gctgattcgc aatgctatcg aaaacggcgg cgaattggaa
    18421 caaattccac aagtattggc aattatgcaa gaacatcaat ctctggatta tgccatgcaa
    18481 aaagcccgtg aagaagccca aaaagcggtg gattcattag gggttttacc ggaaagcgag
    18541 tacaaacaag ccttggtttc attggcgtat ttatcggtgg atcgctctta ttaatttgca
    18601 aaaaatcata taaatttaac cacttgtagg ggcaaatgat atttgcccca taacctataa
    18661 ttcttttggg caaatgttat ttgccccaac ataacaatga ctgaacaaaa ccaacgaccc
    18721 caagaacata ttgaaagcgt acgagcgaga cgccgtgctc aaaatcagaa aaaaggcccg
    18781 aatgccccgt ttgtgcgtga gaaattaacg ctgccaaacg gacataacaa attactgctg
    18841 cactcttgct gtgccccttg ctcgggtgag gtaatggagg ctattcacgc ctccggcatt
    18901 gagtttacga tctattttta taacccgaac attcacccgc tgaaagagta tttgatccgc
    18961 aaggaagaga atattcgctt tgccgaaaag tggggtattc cgtttatcga tttagacgat
    19021 gactacgaaa acgaccgcaa agagtggttc aaaaaagcca aaggaatgga atgggagccg
    19081 gaacgaggca ttcgttgcac aatgtgcttt gatatgcggt ttgaaaaagc agcggaatac
    19141 gctcacaaca acggtttccc tgtatttacc agttgcttag gcatttcccg atggaaagat
    19201 atgaaccaaa tcaacgactg tggtcaccgt gcagcagcca aatttgatga cgtggtttac
    19261 tgggactaca actggcgtaa aggcggcggc tcacaacgaa tgatcgaaat cagcaaacgt
    19321 gaacgtttct accagcaaga atactgcggt tgcgtctatt cgttaagaga tagcaacaaa
    19381 tggcggttgg aaacagggcg tcagcggatt gaaatcggta agctctatta ctcacccgat
    19441 taaatgttac ttttctttgc ttcgccaaag aaaagtaacc aaaagaaagg cgacccgaac
    19501 ttcgcttagt tacgatttcc ttaacggaaa atttgtaaac tcgctacgct caaacagtac
    19561 aaattttcct agaaatcgca agtcgctcag acgggacaag cggtacatta ttcaaaattt
    19621 tttacaaaat atagtgatgt actcttccct tctgaaccgc ccgaacgtgt ttgaattggt
    19681 aggaaaattt actctgagcg aagcgaatgt aaattttccg tgaaaccaat tcaaactaag
    19741 tgaggataag cggtgaagta ggggtgtttc tttggttact ttctttgcac atgcaaagaa
    19801 agtaacgaaa actcagatat agatttcaac ttaaaaattt acagaaggaa taataacaaa
    19861 tgtcaaaatt cgctatggtt ttccccggtc aaggctcaca agcggttgga atgcttgccg
    19921 accttgcgcc acaatatcca atcgtggaag aaaccttcaa acaagcaagt gatgtgcttg
    19981 gctatgactt atgggattta gtgcaaaacg gtactgccga agagttaggg caaacccacc
    20041 gcactcaacc tgcgttgctt gcctcaagcg tggcactttt ccgcatttgg caacaaaaat
    20101 tccctgagca aaaaccagcc gtgatggcag ggcatagttt gggtgaatac tcagcgttgg
    20161 tgtgtgccgg tgtgttggat ttccaagatg cgattaaatt ggtcgagttg cgtggtcgtg
    20221 caatgcaaga agccgtgccg gcaggcagcg gtgcgatgtt tgcgattatc ggtttagata
    20281 acgaaagcat tattaaagcg tgcgagcaag cagcaagcga gaccggtgaa attgtctctg
    20341 cggtaaactt taacagcccg gggcaagttg tgattgccgg cacaaaagca gcggcagaaa
    20401 aagcaggaga attgtgtaaa gccgcaggtg caaaacgtgc gttaccatta gcggtgagcg
    20461 taccttcaca ctgtgcttta atgaaaccgg cggcagaaaa attagccgaa gccttgcaaa
    20521 atattgagct aaatcaaccg cttgtccctg ttatcaacaa cgtggatgtg gcagtggaaa
    20581 cagatgccga taccattcgt aatgcacttg ttcgccaact ttacagccct gttcgttgga
    20641 cggaaaccgt tgaaaaaatg gcacaagatg gcatcactac tttatatgaa atcgggccaa
    20701 acaaagtcct aaccggttta gcaggtcgta ttgtaaaaga attatcagcc aaagcggtaa
    20761 atgatgttgc cagctttgag gcggttgagg cttaattttc gggagcgtaa aatgagtaaa
    20821 gaaaccctat ttatgctaat aagtgcattg attgccttag tgattttacc tttagcttat
    20881 actgttggta tcgctaaaga aacattaggc ggaaatatgg gaatgttatc cattgctgcc
    20941 ggttgctcat ttttagccta ttttttaagt ctaaacccga aaattcgcca cgcctttatc
    21001 ggaggttcag ctattacagc tgctgctatt caagcttggg tattatatgg tgtgctatta
    21061 agcgaaaatg accccaaaag tgcggtcgtt ttatttcaaa tttatctgtt tagtagttta
    21121 gggccactgt ttttttcagc tatttgggca tttactcgcc cacgttggat ttaccctaaa
    21181 caaggtagtg cggtgaaata tgccttattt ggtggcttaa cgaccgtgat aaactacttg
    21241 attacccttt ttatttttta tattctgacg ttataacgtc atactaagga gaatttatga
    21301 gcaaaatcgc attagttaca ggggcaaccc gtggaatcgg caaagcgatt gccgaagaat
    21361 tggtagcaaa aggctacatc gtagtcggca ccgcaacctc tgaaaaaggg gcggaatcta
    21421 tttcagctta tttaggcgag aacggcaaag gcttagtgct aaatgttgcc gatgcagagt
    21481 cgattgagag cgtattaaag cagatcaaag agacctttgg cgatgtggac gtgttagtca
    21541 ataacgccgg cattacccgt gacggcttat taatgcgtat gaaagatgag gattggttcg
    21601 acatcattca aactaactta acttcggttt atcgtttatc caaagcggta ttacgcccga
    21661 tgatgaaaaa aggcggacgc attatcacga tcggttctgt ggtcggctca atgggcaacc
    21721 cggggcaaac caactactgt gctgccaaag caggcttagt tggtttttct aaatctttag
    21781 cgaaagaagt agcaagccgc ggcattacgg taaacgtggt tgctccgggc tttatcgcca
    21841 ctgatatgac cgatgagcta accgaagatc agaaaaatgc gattttaagc caaattcctg
    21901 ccggtgaact cggttctcca caagatattg ccaaagcagt cgctttctta gccagcgatg
    21961 atgcccgtta tatcaacggt gaaaccattc acgttaatgg cggtttatat atgagctaat
    22021 ccgctacaag cggtcttttt tcaaccgagc tttgtaaatt cagagttcgg ttttgttatt
    22081 tgttattttg tgttatcacc tgctttatag gtataggtga aaaagtgtga atatgttatg
    22141 actagaaata cattagtagt aggcttttta ttgtttgcta ttttctttgg tgccggcaat
    22201 ctgattttcc caccaaaatt aggttatgaa agtagtacag aatttttctc agccatttca
    22261 ggctttgttt taactggagt agggcttcct ctactcggta ttatcgtcag tgcattttat
    22321 aatggaggct ataaatctgc attagacaaa atccaccctt ggttttcttt agcattccta
    22381 acttctatct atttagcgat cggtccattc tttgccggtc cgcgcacggc agcaactgcc
    22441 tatgaaatgg cgataatgcc gtttttaggg gattccagcc aagtgtcaat gttaattttt
    22501 accttaattt actttgcctt taccctatgg ttagcgctaa atccaaataa aatggttgat
    22561 cgcattggtg caattcttac cccgatcttg cttataacca tcattggatt agttattcga
    22621 gccggcttta ttttagatac cgatccacaa atcactacgc ctaatacgaa tgaacaatct
    22681 tactttttta aaggtatggt tgatggctat ctaactatgg atgcacttgc ttcgttagcc
    22741 tattcggtaa ttgtattaaa tgctattcgt gggaaagggg taagccaagc cgcattacaa
    22801 cgccaaacag tttctgccgg cttagttgca gcagttgctc tagctgtaat ttatatttca
    22861 ttgggttgga ttggtaataa tatgccaatt agtgcaaaca cactttcgat gttatcagaa
    22921 agaaaattgg atctaggtac ttacattctt aacactgtga ctacccaagc cttcggtgaa
    22981 ctcggacgta gtgtcttagg agtgattgtt tcacttgcct gtttaaccac tgctgtcggt
    23041 ttagccgtat cagtcagtga atactttaat gaaattttcc cgaaaatttc atataaagtt
    23101 tatgctatct tatttactgt gattagtttt actgttgcta accaaggatt aaaagaagtt
    23161 attagcaaat ccattccggt attattagtt ctctacccaa tagcaatgac tgtcatttta
    23221 atgttgctga ttaatttagt gattaaactt ccgttgtctg cacaacgtct atcactccta
    23281 ttagtgacaa ttgtagcgat agcttcagtt gccggtgtcg ggtttaccga aaacttgcct
    23341 ctaaaatcct actcgatgga atggctacct ttcgctatca ttggagctat tattggagca
    23401 attatccacc cgcttaccgg tcgaaagcat aaataaagta aaggcagtga gcattcactg
    23461 cctctttttt aggagagaat aatgcctgaa ttacccgaag ttgaaaccag cgttcgtggt
    23521 gtatcgccct atttggttgg gcaaactatt gaacaaatca tcgttcgtca gccaaagtta
    23581 cgttggacgg tgagtcctga attaagccaa atggcagggg caaaaattac cgcagtagaa
    23641 agacgtgcca aatatctgat tatccgcacc gacaaaggcg atattttggt gcatctggga
    23701 atgtccggct cgctcgggat tttgcaagaa cgtcaacaaa aagaaattgg caaacacgac
    23761 cacgtcgatc ttattaccca aaacggcaca attttacgct ataacgaccc tcgcaaattc
    23821 ggctgttggc tatgggcaga aaaagcagaa gatcacgaac tgttgcgtaa actcgggcct
    23881 gaaccgcttt caaacgattt cacagcagat tacttatttg caaaaagccg caaaaaaacg
    23941 accgcttgta aaacctttat tatgaccaat gaagtggttg ttggggtggg gaatatctat
    24001 gcgtgcgaaa gtttatttat ggcaggcatt caccctgagc ttgcagcaca aaacctgact
    24061 aaaaaacagt gcgaacgttt agtaaaaacc atcaaagaag tgctgactaa agcgattatt
    24121 caaggcggca caacactgaa agattttatc caacctgacg gcaaaccagg ctattttgct
    24181 caagtgttgc aagtgtatgg aagaaaaggg gaaacctgta atgactgcgg aaagccgatt
    24241 gaaactaaag taatcgggca acgtaatacc tatttttgcc cgaagtgtca gagattgccg
    24301 aagtaatcta ataataaact ctctccccct gagggagaga gacagcttgt tgaaacgtta
    24361 agtgaaacaa gcagagagag ggtaaaacct aaacctgcaa ccaaaaggta acaggcccgt
    24421 cattttgtag gctgacttgc atatcggctg caaattgccc ggtttgggta tgaatcttag
    24481 tggcggcttg ttgatgaaag taggcataca aacgttcggc atcaaccggg cttgctcctt
    24541 ttgagaaact aggacgcaag cctttattgg tatccgccgc aagggtaaac tgtgaaacca
    24601 ctaacaaact gccacctgct tgctgtacgt ttaagttcat tttcccctcg ctatccgaaa
    24661 acacccgata attcagcact ttttccagta gcttatctgc tttcgcttca tcatcgtctt
    24721 tttccacacc gagcagcacc aacaaaccgc ttgcaatttc gccaacgact tgcccttcaa
    24781 cctccacttt tgcgaattta acccgctgaa ttaagcctat cattaatgct ccccttgtct
    24841 gtttccattt cgtctaaaac cgccgcaaat tgcccgccaa gtaataccac ctgccaactt
    24901 aactgaatcc ataacagcat aatcggtaac accgctaatg ctccataaat tgcctgataa
    24961 gacgggaagg cagtaatata ccaaataaag gctttcttcc ctaaagtaaa gaaaatcgct
    25021 gccattaatg ccccgatagc agcgtgttga aattttacct ttctaattgg aataaattta
    25081 tacactaagg taaaaagtag ccaaattagc aaaaacggca tcaattctaa taaatgctgc
    25141 ccgagcgata acgctccatt tccattaaaa atagaaagcg acattacata ggtgctaatc
    25201 gcaatgctag caccggcaag cagcgggcca aacagcaaaa tgagaaagta aagcaagaaa
    25261 gagaaccaca tcggacgctg acgattatcg tgccaaatgg tattcaatgc ctcatcaata
    25321 ctcttaatca gcataatagt aaccacaaat aagccgataa aacttaccag ccccatttgt
    25381 ttggcattac tgacaaacaa ctcaatgtat tccgacacca tctcgctcgc actcggggca
    25441 aagttgtcat aaatgaacgc ttttaactgc tcgtttgctt cgtggaaaat cggaaaaaag
    25501 gtaaaaatgg aaaacagcac gacaataaac ggcactatcg ccagcattgt gctataagtg
    25561 agataaccgg ctgaaatcgc aatgttattt tcattgtaac gcttggcaaa gagcttaata
    25621 aatctccaca gtcgatttaa catcttaacc tctcaccaaa taatcgcctt cacacaccca
    25681 tttgtaggtg gttaaggctt ctaatcccat cgggcctcgt gcgtgtaatt tctgcgtgct
    25741 aactgccact tctgccccta aaccaaactc accaccatcg gtaaaacggg tgctggcatt
    25801 aatataaacc gccgcggcat caacctgttg tacaaattga cgggcaagtt gataatcgga
    25861 ggttaaaatc ccctctgaat gctgcgaacc ataatggcgg atatgctcta ccgcttgttg
    25921 caggtcattc accaccacca cgttaagatc aagcgataac cactcttggc tcaattttgc
    25981 ttgatcaagc ggttcaattc cttcaatttt ttgcaaatcg ttactgtgaa tagtaacgcc
    26041 aagctgttgc attttggcga ccaatttcgg caaaaattcc accgcaatcg ctttttccac
    26101 caacagcgtt tccagcgtat tgcaagtgct tgggcgttgc gttttggcat tagcgatgac
    26161 ctctagagat ttctcctgat ccgctgtttt ttccacaaac agatgacaaa ccccaatccc
    26221 ccccacaatc accggaatgg tcgaattttc tttacagaat tgatgtaaac ctgcaccgcc
    26281 tcgagggatc accatatcaa tgtagcgatc tagcttcaat agttccaata ataaggctcg
    26341 atccggatcc gtcaccgctt gcactgccaa tttcggcaag ccggcttttt ctaacgcatc
    26401 ttgcactaca tcaaccaaca cagcattggt aaatttggtc tctttaccgc cacgcaaaat
    26461 cactgcattg ccggttttta ggcataatga tgccacatca atggtcacat tcgggcgagc
    26521 ttcgtaaatg gttaaaatca ccccgagcgg cacacgctgg cgttcgattt tcaaaccgct
    26581 gtctaacacg ccaccgtcca tcacctgccc caccggatcc gctaatttgg caacatttcg
    26641 cacatcgtta gcaatgtctt ttagccgatc ttcattcaat aataagcggt caataatcgc
    26701 caatgaaatc ccttgtgctt gagcaaattc aatatctttg gcattagcgt ataaaatttc
    26761 ttctgcacgt tgctcaaggc tatcggcaat cgtgagtaag gcttggtttt tctgtaggtt
    26821 gccaaattga gccagctcaa aactagcttg tttggcttgc tgggcaagtt ctatcatctg
    26881 cataaattag gtctcattta atcaatattc tccataatct aacacgttct tttatgtgaa
    26941 gaaatatgca aaagccaaga aaattggata aaatggggga attttaaaac attacgcaat
    27001 tcccctctcc ctgatttttc tcctgaacgg agaaaaatct atccctctcc tacaagggga
    27061 gagggtagaa tttaactctc tccccttgtg ggagagagac cgcctacaga ttcgttcaga
    27121 atctgtaggc agagagaggg gtaaaaacag ataaaactta aacaaaatga taaacactac
    27181 ccctaaacag ctaatccaca ttcttccgcc tcaactggca aaccaaattg ctgccggcga
    27241 ggtggtggaa cgccctgcgt ctgtggtaaa ggagctagtg gaaaacagtt tagatgccgg
    27301 agccaatact attcaaatcg acattgaaaa aggcggctct cagcttatcc gcattcgaga
    27361 taacggttgt ggtatcagca agcaagattt accgctggca cttgctcgcc acgctacgag
    27421 caaaatcagc agcttggaag atttagaagc cattttaagt ttaggctttc ggggcgaagc
    27481 attggcaagt atcagctcgg tttcacgttt aacactgacc tctcgtaccg cagagcaaac
    27541 cgaagcatgg caagcctatg cacaagggcg ggaaatggcg gtggaaattc agcctgcctc
    27601 acacccgatt ggcacaacca ttgaagtagc aaatctgttt tttaacacac cggcacggcg
    27661 taaatttcta cgcaccgata aaaccgaatt tgcccatatt gacgaggtgg ttcgccgcat
    27721 tgcccttgcc aagccgaata tcagtttcag cttaagccat aatggtaaaa tcgtccgcca
    27781 atatcgcaaa gtgcaagaca attcggtaga gcagcaacaa aaacgggttg cagccatttg
    27841 cggtgatgag tttattcaac attcaactta tattgacagg caacacgggg atctgcacct
    27901 acacggctgg gttggctcac cggctcttgc ccgtctgcaa aacgaccttt gctacagcta
    27961 tgtgaacggg cgaatgatgc gggataaaac catcaatcac gccattcgcc aagcctacgg
    28021 cgacagcatt gcaagtggtt actatccggc ttttgtgatc tttttggatt tagatccgac
    28081 aatggttgat gtaaacgttc acccggctaa acacgaggtg cgctttcatc aaggaagact
    28141 ggtacacgac tttattttgc aaggcgtact caacagcctg caacaaaccc aacctacgct
    28201 tgaactgcga aatgaagtga acgagccgtt accgagctat gttcaagaca ctaaccgcca
    28261 agctgcgggg caaaatattt ttgtgtcgca aaccgctcca caagcggccg aatttacgca
    28321 aaaaaatgca agtcgatcaa gctatacgcc taaatttgaa cgaagcaaca gtgtgagttc
    28381 gtccgctcaa aaatggtata aggaattggt tggtggcgat ttgcaccaaa caacgccaac
    28441 tatcaaaacg caaagcacgc ttgttgagcc aaaaacagaa ccccaaactg aacataaaac
    28501 agaagccgtt tcgcaaaaaa ttacgcaaat tgcaccgctt gcaagccacc attcacaagc
    28561 cttagcgatt gtaaaaaacc aagcggtgtt aattaaagaa gaggaaaatt tttacctgct
    28621 tccactggca acattagccg agcttaaact caagctacaa ctggaaaaag ggcaatctca
    28681 agcgttgttg atcccactga atctcagttt agatcaacaa caaaccgaac gctggcaaca
    28741 aaccaaagaa gaactaacta agcttggctt ttcgatcagc gaaaaacagt ggcaagccca
    28801 aacacggctc acagtgcttt ccgtaccaca ggctgtcaga gaacaaaacc tgcaacagct
    28861 tttatttgct ctgttcaacc aaacacaagc ggtcaattta gccgaatttt ttgcaaaaaa
    28921 atgcgaaaaa cccaccgctt gtacgctaag tgacgtgatt gctctactct cagaaattga
    28981 gctttatgcc aatgggaaaa aagagctgga gggaataagg aaggaagtgg atttttccaa
    29041 gtttttatag tctaaagggc aatacccttt agccaaataa atgagagtgg ctgccaattc
    29101 gcagcagctc tagcttatca tcttccactt ttcgatagat aagaaccaaa tcaggttgga
    29161 tatggcaatc cctaaagcct ttccattcgc cggttaaagc gtgatcgcag tatttctcag
    29221 gtaatggctt gtcattaatc agaaaataca acgcctcaat taatgaagag gataaagact
    29281 caaccgcaca ttttttatag tcacgtttaa aagcattact atactcaatc tctcgcattg
    29341 agttgctcca ttaaatccgc aatactattt gctgaatgta gcttttcctc gccattctta
    29401 acagccctta atacttctgc tgtctcaaaa ttaggctgat aatcaaactg aaaacgtttt
    29461 tctgttgcga ttttcgctaa tgtcattcgc atcacatcag agacagtcaa gccgataccg
    29521 gctaacacct cacttgcttg ctctttaatt tcagggctga ttcttacgct tactaatgca
    29581 ctatttgcca tcaaaaactc cttttgtata tcaaatgata tacaaaataa catttaacaa
    29641 aaaattgtgc aataaaaaag aaattcaaag aaaagaaatg aatagttaaa attagctcgt
    29701 tacaagaaat cattgagtta ctcaagaaat caaggtaata taaagaagtc tgggcggaac
    29761 acgaacccgc ccctagcatc tagccgctta caagaacaga tagattagtt gaaagagcgt
    29821 gaaaatttca actgctgcac acagaaaccc aagtgcaact aaaatcaata gtagttcttt
    29881 cattgtaagc ctccttagtg ctactaagga tgatttaggc tcaggctact gcgaatagcc
    29941 ctaacgagcc taccagtagc acaatcagga ttgtaacaaa aaagctgtga atttcacggc
    30001 tttttttgta tctatataca gtatattaat atgaataaaa aaccccttgc ccttttttta
    30061 atggggccga ctgcctccgg gaaaaccgat ttagctattg ctttacgcca agaattgccg
    30121 gttgaggtaa tcagtgttga ttctgcctta atttacaaag gaatggatat tggcacggca
    30181 aagccaagca aggaagagct tgcccttgca ccgcatcgct tgattgatat tttagaccct
    30241 gccgagagct attcggcgat gaatttccac gctgatgcgt tgcgtgaaat ggcagatatt
    30301 acctcacagg gtaaaattcc gctcttggtg ggtggcacaa tgctttatta caaggcattg
    30361 cttgaagggt tatctcccct gccctctgcc gatccagcca ttcgggctga aatcgaaagc
    30421 cgagcggcac aacacggctg ggcaacattg catcaagaat tagtgaaaat cgacccgatt
    30481 gccggtgcaa gaattaaccc aaatgacagc caacggatca accgagcgtt agaagttttt
    30541 tacattaccg gcaaaacgat gaccgaactc actgctcagc aaggtgaggc tctaccttat
    30601 aatatcttac aatttgcaat cgctcctcaa gatcgtgcag ttctacacca acggattgaa
    30661 caacgctttc acaaaatgat tgagctaggc tttgaagagg aggtcaagcg gttattttta
    30721 cgcaaagatt tgcatattaa tttgccctcg attcgctgtg tgggctaccg ccaaatgtgg
    30781 gaatatttgc aaggcgatat ttcgctcgat gaggcgatct ttaaaggcat ttgtgccacc
    30841 cgccagctgg caaaacggca gattacttgg ctgcgtggct ggcaaggcga actgacttgg
    30901 ttagatagtt tagctccgac cagttctaaa gcaaaaatgg tggaaaagat cgatcattat
    30961 ttaaagaatt gtgataatat ctaaacgcct ttggcactta tcgcattatt tggtgtctta
    31021 aaaatcacac aactataaaa aggaaaataa caatggcaaa aggtcaatct ttacaagatc
    31081 catatttgaa tgcacttcgt cgtgagcgta ttcctgtttc aatttattta gttaacggca
    31141 ttaaattaca aggtcagatc gagtcgttcg accaatttgt gattttatta aaaaacactg
    31201 taagccaaat ggtgtataaa cacgctattt caacggttgt tcctgcccgt gcgttatcgc
    31261 ataacaataa caaccaagcc caacacgctc agcctgctgc cgaagtaact gaacaagcgg
    31321 aataataaca ttattactca accaatgtta aacgaatcat tgccaaactc agaagaaaat
    31381 tctgcgtttg gctttgcttt atctgaagca agccaaacta cagaagccgc ctcgcctacc
    31441 gatccagaaa atcaagataa agccattttg gtgcatctct atctcgggca acataaagat
    31501 gttgaaaatt tgctggaatt taaaacgctg gcagaatctg ccggtgtcga agtgctggca
    31561 acgcttacca ccagccgcca aagttcgcat atcaaatatt atgtggggca aggcaaagcg
    31621 gagggaattg ccgaagcggt agaacgactc ggggcaacag tagtgctggt gaaccatcaa
    31681 cttagcccgg ctcagacccg taatttgcaa tcgttatgcg gctgccgtgt ggtggataga
    31741 accggcttga ttttggatat tttcgctcaa cgggcaagat cgcacgaagg caaactacaa
    31801 gtcgagctgg cacaacttcg ccatttatcg acccgtttgg ttcgccgagt tactaatcaa
    31861 gaccaacaaa aaggcggagc agttggcttg cgtggtccag gtgaaacaca gctcgaaacc
    31921 gatcgccgtt tgattaaagt gcgaatccaa cagttactca accgcttgga aaaagtcagc
    31981 aagcaacgca atcaaaatcg aaaaaccaga caaaaagccg atattccaac agtatcctta
    32041 gtgggctata ccaatgccgg caaatctacc ctgtttaatg cgattaccca agctggtgtt
    32101 tatgctgccg atcaactttt tgcgaccctt gacccgactt tacgccggat tcaggtgcaa
    32161 gatgtcggca cgacaattct tgccgatacg gtaggtttta tccgttttct accgcacgat
    32221 ttagtttcag cctttaaatc taccctgcaa gaaaccaccg aagctacttt actgctccac
    32281 gtcattgacg gctcagacga acgcaaaaac gaaaatattg atgcggtaaa tcaagtgttg
    32341 gacgaaatcg gagcgttaga tattcctact ttattggtat tcaataaaat tgataaatta
    32401 gaaggtgtag aaccgcatat tgaacgcaat gccgatggca cgccagttgc cgtgtatctt
    32461 tccgcccaag aaaatagcgg cattgagctg ttattccaag ccattcaaga aaggcttcgc
    32521 agtaacttag tgtgtgaaaa cttgctcctc ccggttactg ccggtgcaat ttacgcacaa
    32581 tttaaagcag aaaactgcat taaaaccgag cattttaatg agttcggtga acggattatc
    32641 tctattgaaa ttaacgaagt gcaatggaac aaatgggtga aacaatttcc ggatctagcc
    32701 gaatatattg agctggcaaa atgggggtaa ttaatctcac ttctgagtaa gttatattta
    32761 aattatgcaa gcggtcaatt ctttacgttt ttttgcaaaa aagtgtaaag aattgaccgc
    32821 ttgttttatc cattaaatcc aatttagcca ataaaaaaat ccctcaaata aaccagattt
    32881 ccccgttcta tttgaaggat tttatttatt cttccccaaa agtggggaag aaaagcttaa
    32941 tcaagcagtt actaccactg ataacctacg cttgcagcag cacctgtatc accacggctg
    33001 ttagagttaa cactgaattt gatacccact ttaccattat ctgataaacg agaataacct
    33061 acagcaatag ctccttgacc acggtaagca cctacaccgg ctgaaaccat cgatttacca
    33121 ggttgtgtta cgtgatataa attacctgcg gctaatgcac ctgcaatacc tgcacgtaag
    33181 tctttatcta cgttactgat acgattgttc agacgatttt ctgcaccttt caactgattc
    33241 acattaacag catcagtgcc tttcacaccc ggagcaacgt tcgtaatacg tgtttgcgca
    33301 ttcttgctac ctgcaatgtt aagctcattt acgccatctt ttgcaacagt tgaactgata
    33361 gttgtaccac caactttcac tgaatcaaat tcaagattgc ttgaggttgc cacttcaaca
    33421 gttgaacctt tacgtgaaac aacgatgttt ttgccacctg aaacggccac tttaccattg
    33481 ttattaacac gttgagcacc tttctctgaa gtttcagcta cattaccatc aacagtgaga
    33541 taccagcctg tattctgcat tgcattatac aactggctac cgctcacaac atctttactt
    33601 gttgccgtta catcaccatc tttaacgtta gtgatcttcg tgcctttcgc atcaataccg
    33661 cctttagtta cacttgggcc gtctttaatg gttaaaccat tgttatttac ggttgtgtcg
    33721 ccagttgtta cagaaccatc ttccgttaaa tcaattgctt tcgctaattg tacctctaat
    33781 gtgtctgtac cattcgcttt cacattgatg ttgcctgatg ctgacttaaa gttttcagaa
    33841 gctgttttat ccacaccttc acctttcact ttaacttcag tattcagttt ctgacggttc
    33901 ttcacatctt cattgttacc agagaagatt aaaccatcat ttaaggttgc aacttgttct
    33961 gtgacagttt taccgtcttt atctttggtc tcataaacga tacgagtctt accgttctca
    34021 cccggtaatc catctttacc atttgtacca tcaacacctt cagcaccatc tttcactgca
    34081 atatttgcac ttgcaccatc tttaccgtca gcgcctttcg gaccggttaa gccgatagag
    34141 ccatctttac cgtttaatac aacagaagcg ccatctttac ctgtagctcc aattgaacca
    34201 tcaacaccgt ctttaccgtc acggcctgca gtaattgtgc cgtcaccttt aatggttacg
    34261 ccatctttac cgtctttgcc agcaataccg atttgaccgt ctttaccatc tttaccacca
    34321 atggttaagt tgtttttcaa gccgaaggtc acgttattac cttctttagt aataataatg
    34381 ttaccgtctt tgttgtttag atcaactgtt gctcctggtt taacgttgcc tttgtcttta
    34441 ccatttgctg ttaagttcca acctgcgtta gcaacttctt gcacttgata taactggcta
    34501 ccatttaccg catctttgct ggttgcagaa atttcaccgt cttgaacgtt aatgattttc
    34561 ttatcgcctg cattgatacc ggctttagtt acacttgggc catctttgat agttaaacca
    34621 tcattattta ccgtagtatc accaatagtt acagaaccat ctttcgttaa atcaatgtct
    34681 ttcgctaatt taactgttaa cgcaccattg ttgtttacaa caccgatatt gttatcggac
    34741 aggttcgtta aatcagtatc accgcctgag atttttaacg tctcattaag tttcttaacg
    34801 atttctttac cgtcatcacc tacgaatctt aagccatcgt tcagtgttgc aacttcctca
    34861 gttgtaccgt ctggtttctc ataaacgata cgggttttgc tttcgccatc tttaccgtcg
    34921 ttaccgtcaa ggcctttagc accgtctttt acagagatag ttgcacttgc accatcttta
    34981 ccgtcagcgc ctttcggacc ggttaagccg atagagccat ctttaccgtt taaagtaaca
    35041 ccaactgtac catctgcacc tttaacaccg attgaaccat ctttacctgg accgccaatg
    35101 gtaaaatcgt tatttaacgt aaagtcaatc acattatcac ttactgttgt gatgatgttt
    35161 ttgtctttag aggtgtactt aacagtttca cctagtttaa cgtgatcagt ttcaccatta
    35221 tccgctgcaa tgctaaagcc tttctcgata atatcgttgc ttgcatttac aacatcatta
    35281 atattcgcag cgttagtacc aacttctttt aattgatcgt ctgttaagtc gttcactgaa
    35341 gtgattggct taccatcttt accgttaatg ccgtctttac ctgctaaacc gtcaataccg
    35401 ctcttcacgt taacaatttg gttgccgcca ttgtctagac cgtcttcagt aagcttaact
    35461 gctttaccat ctgtgccatc ttttggcgtg atagttacgc cattattatt tactactgtt
    35521 gttggacctt taccttcttg accattctct ccatcttgtg gtttgaatgt agctgagttc
    35581 aagtctttaa gatctttagc taattgaaca gataatttac catctttgct gtttacgccg
    35641 atgttatttg cagttagctt atctttatca gctccaccaa tgatttctaa ggtttcattc
    35701 aatttcttag atactagtgt tgcatcatca cctttaaagt gtaaaccatc atttaaagta
    35761 gctacttgct ctggttcacc tataggatca ccattgccat ctgttggctg atattggata
    35821 cgagttacac catctttacc tggtaaacca tctttaccaa caagccctgg tttgccctca
    35881 gtacctttaa tggttaaacc atctttacca tttgtaccgt tcaagccgat tgaaccatct
    35941 ttaccgttaa gaacaactgc agaaccgtct ttaccgttta caccgatagt accatcaata
    36001 ccatctttgc cagggcgacc tacagtgata gctccatctt taccatctaa agcaatagca
    36061 tctttaccgt ctttaccagc aataccaact ttacctggtt caccatcttt accaacagta
    36121 atattattca ctaggctaac ttctaatgca tggccaccat ctttctcaac aacgtttgtt
    36181 ttaacattgc catcaccaat gatcttagct gtcgtaccta agttttgctt aaactccttg
    36241 ttgttctcat cttttagacc aaacgcatct gttgtcacct cagtaacagt ctcagtaaca
    36301 gtatttttca agtcaccgac gttaaccgca ttgttaagaa catcacctgc tgcctcagta
    36361 agtttaacag gttgaccatc tttacctttt aagccgctat caacattggt gatttggtta
    36421 ccaccgttgc ttaagccatc ctctgttaag gtaacattag atttagttgc atcattagga
    36481 tctttcttag caatcgttac accatcttta ttgataactg tagaatcacc ttgtgtgccg
    36541 aatgttgcac tatctaagcc tgctagatct tttgctaacg ccacagtaat ggtattgcca
    36601 acaacctgtg tcatgatatt tttaccagca tcaaacttag cccaatcagt gtttgttgta
    36661 gcacctttaa tatccacctg cgtatttaat ttcgcatcgt gaactttgcc atcattcgca
    36721 ccgaatttta agccatcgtt aagtgttgca acttcttctt tatcaccatt tggtttttcg
    36781 taaacaatac gagttttgct ttcgccgtct ttaccgtcgt tgccgtcaag acctttagca
    36841 cctttctcaa ctttaattga tgctttacca tcttttccat cttttccatt tacgccatca
    36901 acgccgtgga atacgatggc ttctggttta attgttacac catctttacc atcagcacct
    36961 ttaacaccaa ctgaaccatc tttacctggt ttaccaccaa cagagatgtt atcggataag
    37021 ccaaaatcga tggtattatt tgttacggtt gtaacaacat tcttatcggt tgaggtgtac
    37081 ttaacagttt cacctaactt cacattgtct tctttagcac cacctcctaa gccagagtga
    37141 tccgctgtaa tgttaaagcc agttttaact aaagtgtcag ctactgcgta aagttgtgaa
    37201 ccgttaatcg catctgttga attggaagca attttacccg gtgcaacaaa cttaatttgg
    37261 cgagcattgg ttgcattacc cacactcaca taatcaccat caacaacatt ttcatcgcca
    37321 gcaaagctgc tatattttaa tgtgccaaca gttgcagtat cttctttagt tgcggttgct
    37381 tcagtagagt cagaacctag aattacagaa ccctttgtct taacagtaac attagaacct
    37441 aatacgaaag tatctttacc tgaaactgta ttgttataac ctaaagccgc agcacgaata
    37501 cccgaaacag tactatttac accggctgca attgagtttt taccctttgc ggttgagttg
    37561 taagcaatag cagttgcata attacctttt gatttggcct caaaaccaat tgctgtgcca
    37621 ccttcatgcg taatattggc acgtgtacct actgctgtcg cattcgcctt acttacatta
    37681 gcactataac ctatcgcaac agaattatta ccacttgaat tagccgtatc accaattgcc
    37741 attgcaccat ctttgctcgc gttagaatgc gaaccaatac tgatcacttt ttctgcatga
    37801 gagtttgcat tccaaccaat gctaatagca ttacttttcc aggctttaga agcattacca
    37861 aaagcaatcg caccgattcc tgttgtattc gaatttacac caaaggcgat agaaccatca
    37921 cctgttgcac ttgcatttgt tgaaaacgcc aaagtatcat tcgaatttgc acgagtattc
    37981 gtacccaaag caaatgcatt atttgctact ttcgctgtat caggattaat tacctgtcct
    38041 aattcagaaa tatttgaatt ctctaattta aagccaccgg accaagcgtt agtaccaatg
    38101 gcaaatgaat ggttaccatt agttttcgct ttagtaccga ttgagaatgc atctgttcca
    38161 aatgctaaag tattattttg cccatcataa attgaacgtc tattttcatg accgtaactt
    38221 ccatccactg tctgtggagt accactacca atcgcaaaag aacggtcacc tagcgctgta
    38281 gccgaagcac caatggcgaa gctagctgta gcatttgccc aagatgttga accaattgca
    38341 gtagaataat ctgcaattgc agcagattga cgcattgcag caaatgagtt aaatccttcc
    38401 gcacgtgcag aggtacctaa tgctacagaa ccaatacttg cagtacgaga aaaagaacca
    38461 attgcaatag acaatccccc tccagaatat gaataatcac caatggctat gcctgacgct
    38521 ttcggttttc ctctactttt tctgttattg tctaaagcta cagcattgtg tccaattaca
    38581 attgctgagg tagtattaga cttatacaat aatctagaat ccttctcctt attaacagag
    38641 ttattagatt cttgaagctt agttctgtct gcataggata agctacctgg gttaaagtag
    38701 ttatatggat tcgtaataga atctgtagcc aaactagtgt ttgtataaat atctatacca
    38761 ccattaacaa ctttttttgg tgctttttgt tgtacttcta ttctatcaat aatcaccgcc
    38821 gcttctgccg gtgtagcaga aagcataaag gctgccattc cactgataag ggttgctccc
    38881 cctagaatgc tagccgctgc taatttaata gtaccgcgct tatcagtaga agaagcggct
    38941 ttaccttgcg atcgagcaag ttcagacaca acttccattt tttgcgtcgt ttggttaaaa
    39001 ataaccttaa atattttgtt cataatttta tacctttaga attattataa agcttacttc
    39061 gtaaataatt cggcaattac aacccaccga ataaacaacc ttactactct taatttagta
    39121 agaggaaagt catatcgata atagtaagat tttcacttca aaagtgaaac aagcttttca
    39181 cttctttaca attctcttat tatcaagata ataaaattaa caaaacccct tataaatcaa
    39241 acaaacacac agta
//
LOCUS       DANLXO010000010        39113 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.010, whole genome shotgun sequence.
ACCESSION   DANLXO010000010 DANLXO010000000
VERSION     DANLXO010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 39113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39113
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.010"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..804
                     /locus_tag="PXD69_000430"
     CDS             <1..804
                     /locus_tag="PXD69_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL6282668.1"
                     /translation="LFEQKSVRSHYDEEKDKWYFSIIDVIAILTESLDPSAYWRKLKQ
                     RLKAEGNETVTNCHGLKMPSADGKMRLTDVADTEQLFRLIQSIPSPKAEPFKQWLAKV
                     GYERLQEINDPSQSLDRARENWQKMGRSEKWIQQRMMGQETRNKLTDYWKSSGVEQPQ
                     DFAFLTNVIHQEWSGLSVQKHKSLKGLKSQNLRDHMSEAELLFTALAELSSRQIAESM
                     QAVGVDENAQAGKQGGNIAKNARQELENKTGKSVVTGENFLPPAKNEEE"
     gene            complement(898..1377)
                     /gene="trmL"
                     /locus_tag="PXD69_000431"
     CDS             complement(898..1377)
                     /gene="trmL"
                     /locus_tag="PXD69_000431"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDL6282669.1"
                     /translation="MLDIVLYEPEIPQNSGNIIRLCANCGFRLHMIEPFGFGWDDKKL
                     RRSGLDYHEFVDIQKYKNFEDFLERAKPKRLFALTTRGEQNHSDVKYELGDFLMFGPE
                     SRGIPKPLLAEMPMSQKIRIPMCKDSRSMNLSNSVAVVVYEAWRQFGYQNAVAAQSI"
     gene            complement(1554..3713)
                     /gene="rlmKL"
                     /locus_tag="PXD69_000432"
     CDS             complement(1554..3713)
                     /gene="rlmKL"
                     /locus_tag="PXD69_000432"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HDL6282670.1"
                     /translation="MTNQTTYFATAARGFEEILKTELEQICAAECKVAQGGVHFTTTQ
                     KGAYQALLHSRLASRILLPLISTKIFSDSDLYASIVSFNWADLFDPRDTFYIDFSGTN
                     REIRNTQFGAMRVKDGIVDYFERKGFARPTVDKDNPDVRIHVYLDRENVVVSLDLSGD
                     ALHIRGYREETGKAPLRETLAAAIILRSGWKVGTPLVDPMCGSGTLLIEAAQMAANIA
                     PQLHRKHWGFNAWKGHQQAMWKAVLDEAFRNVELGAVGENCNSSLQKMFFGFDLDHRV
                     LTKAKQNAKNAGVDHLIQWQQGDVAALKNPIPEKIGTVVCNPPYGERLGTTPALIALY
                     SVFGQRLKQQFAGWNASIFSGEPELLNCLRLRSARQFKAKNGPLDCVQKNYSISEHNK
                     RSDLDENLQFEQNAQVAPDFANRLTKNIKKIEKWAKQQGIDAYRLYDADLPEYNLAVD
                     RYGDHIVVQEYQAPKNIDEQKARQRLLDAVSATLYVTGVETNKLVLKVRQKQKGTNQY
                     EKLANKGEYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMVGEMAKGKTFLNLFAYT
                     GSATVHAALNGAKSTTTVDMSNTYLNWAEQNLELNNLSLRHHRLFQADCLQWLAECRE
                     RFELIFVDPPTFSNSKRMENSWDVQRDHIELMKQLKRILTADGTIVFSNNKRGFKMDF
                     DGLAALGLTAENISHKTLPLDFERNPQIHNCWIVKNV"
     gene            3911..4540
                     /locus_tag="PXD69_000433"
     CDS             3911..4540
                     /locus_tag="PXD69_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL6282671.1"
                     /translation="MTAPTQILLIDDHPLMRQGMRQLLELDHQFSVVGEASNGTDGIK
                     LALRLEPDVIILDLNMKGLSGLDTLRSLRAQGIDARIIVLTVSDEQSDVFALMDAGVD
                     GYLLKDTDTPELLDNIRKAAAGEVVLSETVRQHLLNRQPENDPLSCLTDRELDVLQWL
                     ATGMSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLYLEQQKG"
     gene            complement(4576..5586)
                     /locus_tag="PXD69_000434"
     CDS             complement(4576..5586)
                     /locus_tag="PXD69_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL6282672.1"
                     /translation="MATMKDIARLAQVSTSTVSHVINNSRFVSEEIRERVQRVVKELN
                     YTPSALARSLKVNETKTIGMLVTATGNPFFAEVMAGVEQYCQQHQYNLIIATTNGDTE
                     RLQHHLQMLMQRKVDGLLLMCGDTRLNADESLNIPLPLVVLDWWFTELNADKIFENSI
                     SGGYLATKTLIEAGHSKIAIITGNLKKSLAKNRLEGYKKALAEANIPLNPNWVFESHF
                     DFAGGVNGMNALLAQSEKPTAVFACSDTIALGAYQAIWQQGLRIPQDISIIGYDDIEL
                     AKYLSPPLSTISQPKAELGRLAVETLLKRIRFKSTDFQTIMLEPELVLRHSIQTINKN
                     AE"
     gene            complement(5600..6529)
                     /gene="rbsK"
                     /locus_tag="PXD69_000435"
     CDS             complement(5600..6529)
                     /gene="rbsK"
                     /locus_tag="PXD69_000435"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDL6282673.1"
                     /translation="MKKLTVLGSINADHVISVPYFAKPGETLTGHSCHIAYGGKGANQ
                     AVAAARLGAKVSFIGCIGSDDIGKAMKSAFEQDGIDTRSIKTIPNEMTGIAMIQVAES
                     GENSIVISAGANGHLDETVVAKCAAEITQADYLLMQLETPLPAIVQAAKLAQQNGTKV
                     ILNPAPARALPDELLNLLDMITPNETEAEILTGVKVVDEASAIQAAQVFHQKGIEKVL
                     ITLGSKGVFVSENGVGKIVAGFRVQAVDTTAAGDTFNGALVTAMLEDKPLDQAIRFAH
                     AAAAISVTRKGAQPSIPTRQETLDFLSQQAVSF"
     gene            complement(6650..7528)
                     /gene="rbsB"
                     /locus_tag="PXD69_000436"
     CDS             complement(6650..7528)
                     /gene="rbsB"
                     /locus_tag="PXD69_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
                     /protein_id="HDL6282674.1"
                     /translation="MKKLTTIASAVMLSLSVAATASAKETIALAVSTLDNPFFVSLKD
                     GAQKKADELGYKLVVLDSQNDPAKELSNVEDLTVRGAKVLLINPTDSEAVGNAVAIAN
                     RNKIPVITLDRGAAKGEVVSHIASDNVAGGKMAGDFIAQKLGSGAKVIQLEGIAGTSA
                     ARERGEGFKQAIEAHKFNVLASQPADFDRTKGLNVTENLLSSKGDVQAIFAQNDEMAL
                     GALRAVSSAKKEVVIVGFDGTDDGVKAVESGKLAATIAQQPELIGSLGVETADKVLKG
                     EKVEAKIPVDLKVISK"
     gene            complement(7551..8519)
                     /gene="rbsC"
                     /locus_tag="PXD69_000437"
     CDS             complement(7551..8519)
                     /gene="rbsC"
                     /locus_tag="PXD69_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HDL6282675.1"
                     /translation="MATQTKQFQLGRFLIEQRSFVALFILIVSVSMINPDFFSVDNIL
                     NILRQTSVNAIIAVGMTFVILIAGIDLSVGSVLALTGAVAATLVGSELPILLVIPLVL
                     LLGTAFGGISGAIVAKGKVQAFIATLVTMTLLRGITMVYTDGRPISTGFSDQADAFAF
                     IGTGYLFGIPVPIWIMAVVFGLAWYILKHTPIGRYIYALGGNESATQLSGINVNKIKI
                     FVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTL
                     VGALIIGFLNNALNLLDISSYYQMIAKALVILAAVLADNYLGTKKV"
     gene            complement(8529..10025)
                     /gene="rbsA"
                     /locus_tag="PXD69_000438"
     CDS             complement(8529..10025)
                     /gene="rbsA"
                     /locus_tag="PXD69_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
                     /protein_id="HDL6282676.1"
                     /translation="METLLKMSGIDKEFPGVKALSNACLSVYGGRVMALMGENGAGKS
                     TLMKVLTGIYSKDAGSISYLGKEVTFKGPKDSQEAGISIIHQELNLVGNLTIAENIFL
                     GRESKTAWGAIDWKKMYAEADKLLARLGVKHSSHQLCAELSIGEQQMVEIAKALSFES
                     QVIIMDEPTDALTDTETASLFKVIRELKAENRGIVYISHRLKEIFEICDDVTVLRDGQ
                     FIGERVIADIDEDQLIEMMVGRRLEEQYPHLHQERGELLLEVKNLSGSGVNNVSFQLH
                     KGEIVGISGLMGAGRTELMKVLYGALPKTAGSIELNGKAISNHCPQDGLNNGIVYISE
                     DRKGDGLILGMSVKENMSLTSLDHFSKAGSIRHDAEKLAVDDFIEMFNIKTPSREQQI
                     GLLSGGNQQKVAIAKGLMTRPNVLILDEPTRGVDVGAKKEIYQLINEFKKDGLSILMV
                     SSDMPEVLGMSDRILVMHEGQISAEFSRAEATQEKLLAAAIGKSTGLN"
     gene            complement(10035..10454)
                     /gene="rbsD"
                     /locus_tag="PXD69_000439"
     CDS             complement(10035..10454)
                     /gene="rbsD"
                     /locus_tag="PXD69_000439"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDL6282677.1"
                     /translation="MKKTLNLNAQLSHSIATLGHTDSLTVCDAGLPIPNTIERIDLAL
                     TAGVPSFLQTFDVVVSELFVERVLLAEEIKHKNPQVLAALLERLTQLEQTQQNKIQID
                     YVNHEIFKEQTHYSKAVVRSGECSPYANIILYSGVPF"
     gene            10684..10944
                     /locus_tag="PXD69_000440"
     CDS             10684..10944
                     /locus_tag="PXD69_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001196283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDL6282678.1"
                     /translation="MALLITHKCTNCDMCLPECPNEAISVGDDIYIIDPVLCTECVGH
                     YEKPTCQKVCPITNCIIKDPDNIETEEQLWERFVMIHHPDQI"
     gene            complement(10976..11866)
                     /locus_tag="PXD69_000441"
     CDS             complement(10976..11866)
                     /locus_tag="PXD69_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HDL6282679.1"
                     /translation="MAMNFKQVSQSYPNLCVPLSQYCLIEIAGVDAEKYLQGQLTCDV
                     AKISVGEHTLTSHCDPKGKMSALLRLYRAENEKFMAIIHRSLLPEALTQLKKYAVFSK
                     VTFTELDTPLYGMAGEAAFAKLSENMTALRLTTGQPRAIVWGEELETTADEQLWTLMD
                     IQDGIPVLLQQNQFELIPQATNLQALESAISFTKGCYIGQETVARAKYRGANKRALFT
                     LAGNFESEISLPEVASAIEMQLGENWRATGTVLTSATDENTLWVQVVLNKDVEPNTKF
                     RANGVALEMVELPYSLAENE"
     gene            complement(11875..12738)
                     /locus_tag="PXD69_000442"
     CDS             complement(11875..12738)
                     /locus_tag="PXD69_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HDL6282680.1"
                     /translation="MIYSMTAFAHLEMKKEWGNAVWEIRSVNQRFLETYFRLPEQFRN
                     LEMTLRERLRSALTRGKVECSLRIDLSKTQNSEIALNKEYAAQVVQSLKWLKETANEG
                     EINLVDVLRFPGVVDNESQDLDQIAQDLLAGFEQILADFIAMRAREGENVQALILQRL
                     EAISVEAAKVQAQMPEILQWQKDRLQQRFDELNLQLDPQRLEQEMVLLAQRVDVAEEL
                     DRLQLHVKETTNILKKGGAVGRKLDFMMQELNRESNTLASKSINADVTNSAVELKVLI
                     EQMREQIQNLE"
     gene            13019..13735
                     /gene="rph"
                     /locus_tag="PXD69_000443"
     CDS             13019..13735
                     /gene="rph"
                     /locus_tag="PXD69_000443"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001261764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HDL6282681.1"
                     /translation="MRPNNRANNQVREIKITRNYTRYAEGSVLIEFGETKVLCNATVE
                     ESVPRFLKGQQQGWVTAEYGMLPRATHSRTQREAAKGKQGGRTMEIQRLIARSLRAVV
                     DLKALGERTVTVDCDVIQADGGTRTASITGACVALYDAMNKLVANGTLKTNPMKGLVA
                     AISVGIVAGEAVCDLEYLEDSNAETDMNVVMVEDGRLVEVQGTAEGEPFSHQELLTLL
                     DLAKQGISQLVEAQRKALAE"
     gene            13959..16258
                     /locus_tag="PXD69_000444"
                     /pseudo
     CDS             13959..16258
                     /locus_tag="PXD69_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759321.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(16336..17037)
                     /locus_tag="PXD69_000445"
     CDS             complement(16336..17037)
                     /locus_tag="PXD69_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDL6282682.1"
                     /translation="MDLQNRENFLNKLAQRMGRPRQNVPEPIPVLENNHAITRLTDRP
                     QPQLCQEFIDFARVMMADVVEAKEADLPQAIIDICEKYGGASVIVNNDQRLKDLGITA
                     AIQAKYEDSYVWDFNQAETNFEKARTANIGVVYGEYGLAESGGIVLFSDKEFGRSVSL
                     LPEKSVVVLRKSTVLPRVAQLAQILHEKAQRGERMPSCVNIISGPSATADIELIKVVG
                     VHGPVNKIYLVIDDL"
     gene            complement(17042..18451)
                     /locus_tag="PXD69_000446"
     CDS             complement(17042..18451)
                     /locus_tag="PXD69_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDL6282683.1"
                     /translation="MSYLQTNTLPFKQRVEQQVNNEIVRKALVKAQETIGANRQRMVD
                     ELGNWEEWRDDAKAIRNHVLANLDAYLYQLSEKVTQNGGHVFFAETAEEATDYIKNVA
                     KAKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYLLQIVGDKPSHIVVPAIH
                     KDRHRIRQEMHDVLGYQGSETPEEMTAFVRQKIREDFLEADIGISGCNFAVPETGSVC
                     LVTNEGNLRMATTVPKTHIAVMGMERIAPTFKEVDVLITMLARSAVGAKLTAYNTWLT
                     GPRLEGETDGPEEFHLVIVDNGRSKILESEFQEVLRCIRCGACLNTCPAYRQIGGHGY
                     GSIYPGPIGSVISPLLGGYEEFKELPYACSLCTACNSVCPVKIPLAQLILKHREKIAD
                     AGLTPMAERLSIFGFNFANSHPTLWKVGVKVGAKVASKLIKNGKAPVNFGALGEWTKA
                     RDLPTAEGESFREWFNNRG"
     gene            complement(18453..19184)
                     /locus_tag="PXD69_000447"
     CDS             complement(18453..19184)
                     /locus_tag="PXD69_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDL6282684.1"
                     /translation="MNVNFYVTCIADVMKAGVAKNTVLLLEKLGCKITFLEKQGCCGQ
                     PAINSGYTKQALAGMKNLVETFEANDYPIVAPAGSCVYAIKTYPDHFERFGEKEWAER
                     AKKVADRFYDLTDFIVNKLGVKDVGAYLPGKAVYHPSCSLFRKLGIKDEPIALLQHVK
                     GLELLPIKNQETCCGFGGTFSVKMAEISGEMVKEKVANVDTDEPDYLIGADVSCLMNI
                     GGRLSREGKPIKVMHIAEVLMQGGK"
     gene            complement(19328..20932)
                     /locus_tag="PXD69_000448"
     CDS             complement(19328..20932)
                     /locus_tag="PXD69_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDL6282685.1"
                     /translation="MALFLSVFPIVLLIYLMVKRNALPSYVALPLTALLIFVLQLTYF
                     GNDTTLIFANIIAGLGDVLTPITVIFGAILFNRFSEVSGATNTMRKWLGTINPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILVGLGFKPLQVAMLALVMNSVPVSFGAVGT
                     PTWFGMGPLLKDGLLTDAQVLEIGSITALIHSIAAFIIPVMALRLIVSWKEIRQNIVF
                     IYISIFACVIPYFIIAQFNYEFPSLVAGAIGLLVSVWVANMGIGLAKSENHLDGDKAT
                     FGEVAKALLPTGLLIFILVITRIQQLPLKAMLNDATAWIVSSLGFANFEISQGLIFAL
                     KNILGTNVATSYKLLYVPALIPFVVTVLICLPIFSVSGKNTQEIFGTSFKQVKKPFLA
                     LLGAIVMVKLMLIGGVDSMVQIIGKNFAEFTGQSWTLFASFLGAIGAFFSGSNTVSNL
                     TFGTVQYATAQQVGLSVTLILALQSVGGAMGNMVCINNIVAVCSVTGIEKQEGNIIKK
                     TAVPMFVYGVIAAISALFIVPMFYNL"
     gene            complement(21222..22313)
                     /gene="ychF"
                     /locus_tag="PXD69_000449"
     CDS             complement(21222..22313)
                     /gene="ychF"
                     /locus_tag="PXD69_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDL6282686.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVV
                     PMPDPRLDALAEIVKPERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGH
                     VVRCFENDDIVHVAGKIDPADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKF
                     ELSIMEKILPVLENAGMIRSVDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPY
                     LDRVREIAEKEGAVVVPVCAAIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRL
                     LNLQTYFTAGVKEVRAWTVSVGATAPKAAAVIHTDFEKGFIRAEVIAYQDFIDNKGEA
                     GAKEAGKWRLEGKDYIVQDGDVMHFRFNV"
     gene            complement(22499..23086)
                     /gene="pth"
                     /locus_tag="PXD69_000450"
     CDS             complement(22499..23086)
                     /gene="pth"
                     /locus_tag="PXD69_000450"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDL6282687.1"
                     /translation="MSEIKLIVGLANPGVKYEETRHNAGEWLINELARIYNVSLKEEP
                     KYFGKVAKINTAQGEVRLLVPTTFMNLSGKAVGALANFYRIKPEEILVAHDELDLPPG
                     SVKLKKGGGHGGHNGLKDIIAALGNNKEFYRVRIGIGHPGHKDLVANYVLGKPSPSDQ
                     TLLNSAVDEAARCVEVLFKDGMVKATNRLNSFKAN"
     gene            complement(23159..24034)
                     /locus_tag="PXD69_000451"
     CDS             complement(23159..24034)
                     /locus_tag="PXD69_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HDL6282688.1"
                     /translation="MMKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSA
                     YVVFDLNQKKFLEGKNFNLVRPIASVTKLMTAVVFLEENRYGASCQTQILPSDADFLK
                     GTTSPLPKNLNIACSELLKAMLVRSDNYAAHALAHATHLNKAQFLARMNSKAREIGMT
                     QTYFGDSSGLSSDNVSTVVDLAKLAGYAASKPEIQQLSNSPLVSVYAGGRYFSMKNTN
                     SMVRSQSYQALVSKTGYTREAGYNLAFIAKGDCRGKRIGVVSLNNDNAASRTDFTESM
                     LAKYQCVPNPYRQYD"
     gene            24256..25836
                     /gene="prfC"
                     /locus_tag="PXD69_000452"
     CDS             24256..25836
                     /gene="prfC"
                     /locus_tag="PXD69_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDL6282689.1"
                     /translation="MSYPQEVNKRRTFAIISHPDAGKTTITEKVLLYGNAIQTAGSVK
                     GKGSAQHAKSDWMEMEKQRGISITTSVMQFPYNDCLVNLLDTPGHEDFSEDTYRTLTA
                     VDSCLMVIDSAKGVEERTIKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVESVLK
                     IKCAPITWPIGCGKLFKGVYHLYKDETYLYQTGQGHTIQEVRVVKGLNNPELDQAVGD
                     DLAQQLRDELELVQGASHEFDHTEFIKGELTPVFFGTALGNFGVNHFLDGLTEWAPAP
                     QARQSDEREVSPSEEKFSGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLKHVRIG
                     KDVVISDALTFMAGDRSQAEEAYAGDIIGLHNHGTIQIGDTFTQGENFKFTGIPNFAP
                     ELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLINNDLIVGAVGVLQFDVVVSRL
                     KTEYGVEAIYETVNVATARWVEGKDAKKFEEFKRKNEANLALDGGDNLTYIAPTMVNL
                     NLAQERYPDVQFFKTREH"
     gene            26095..27669
                     /locus_tag="PXD69_000453"
     CDS             26095..27669
                     /locus_tag="PXD69_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6282690.1"
                     /translation="MKKWLIPLTVAAFCVSACDDKNSTQATAEKPQVENTQSQKNAEI
                     LPLATVVAPWEINSLDPNQSGVIFQRMNLAETLVEADLNGNLIPALATDWRSNEEGTI
                     WRFTLREGVKFHNDQVLTAQAVVNSLNIAKSKPGVLAKAFIKEIRAVDNKVEIELTKA
                     FVPFPPFLTHYTALILAPESYNEKGEVTQIIGTGAFKPTKIEAPQKLEAVQFEGYWGK
                     KPQVQQANYLASSRSETRMLMAQSEPSSLVFNLDTASVARLKADPNLQLVSGSIARTI
                     QLKMDVAKPFFNDLAIRQALSQAINRKAIAEQVLKIENGAADQILPKAFADWRVDTAE
                     QVVDIAKIKQNLTASGYTFDEQGRLTKDGKPFSFTMRTFSDRPELPVIATILQAQWKQ
                     IGVEVNVSVGNFSEIPAGHQDGSLEMALYALNYGKTLDPYGVIASDFANGGSDWGVMN
                     WQNTEVDNAVKSLETERDPQKAKALKQTVSKIIYNDLPIIPVVYYQQNVVAHKEVKNV
                     TLDPFERRFFLELLSK"
     gene            27889..28821
                     /locus_tag="PXD69_000454"
     CDS             27889..28821
                     /locus_tag="PXD69_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6282691.1"
                     /translation="MHKILFRRLIQILLVIWSVGTLTFILTRQLSGDMAYRIAASRYG
                     YDQADSAAAEAVRAELGLDQPWWQSYFSWLSDLAQFNLGKSLVTGDPVWSEIQHQFGH
                     TLSLAIVALILAILIGPPLGLLAARKPNGFFDRLTLVFSTLFRSVPAFIIAIGLITLF
                     SAQLKWLPAGGYGCWQHFILPALTLAIGLSTVSVRVTRSAMVQVKGSEFYQFSQLKGL
                     SRWHTFLRHGLPNIAVPVIAYHAVQLVYLIEGVVVVESLFAWPGSGHALVHAIIARDV
                     PMIQGTTLVMGGLFVVLNTIADLLSAWIDPRIKR"
     gene            28831..29613
                     /locus_tag="PXD69_000455"
     CDS             28831..29613
                     /locus_tag="PXD69_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6282692.1"
                     /translation="MKISISQYLGGTILLAMLGFAFLQPYFYPMDIGFQDLTNILSNP
                     NEIAWFGTDHLGRDMLARLASAIRLSFGLSLFSVICALIAGLITGIMAGFFGGWIDRI
                     FSFICDLVMALPGLLLVLLFAALSPGSFWTLYLGISLVMWVEFFRVIRSISSTMANSS
                     EIQASRLMGMGWFYSFKRHLLPRLLPMIATLSAFSLGNAILALATLGFVSVGLRPPTA
                     ELGLMMTELFPYYYEAPLIFLQPVVAVFLMVLSLQLLSRKIK"
     gene            29702..31114
                     /locus_tag="PXD69_000456"
     CDS             29702..31114
                     /locus_tag="PXD69_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6282693.1"
                     /translation="MKLLDIQNLSVETENRLQLVEPISLQLKAGKNITILGETGSGKS
                     LLIQAIMGALPDGLIASGEISVKNCKISTESDRLQTLWGKTLVMLPQEPRRSLNPIMA
                     IGKQLWESFHYVAGKPSSQAKTESKAYLAKLGLGESVENYPHQLSGGMAQRASFAIAT
                     AAGGKILLADEPTKGLDPISKGKVIELLKSAYQNGGGLLTITHDIEVAEQLGGTILVM
                     KKGELLEQGEAKALLNNPQHPYTKALISADPKHWQPLQDLQNLSQKQPLVSVKNLSIA
                     RGKKTLFSNLSFDLHKGEVLGIVGHSGIGKSSLADVLCGLLKPKSGEVVWHSHSHKKH
                     QVLKLYQDPPEAFAPNVSLKTLLDDVINKHQLDRLPIPSLLQQLSLNPEILQRNAENV
                     SGGELQRVAILRALLLEPVLLFADEVTSRLDPITQQETIELLINQCRARNCSLILVSH
                     DPYLIEKSCDKVINLEEYVG"
     gene            complement(31201..31944)
                     /gene="rlmB"
                     /locus_tag="PXD69_000457"
     CDS             complement(31201..31944)
                     /gene="rlmB"
                     /locus_tag="PXD69_000457"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDL6282694.1"
                     /translation="MSEQIYGIHAVKAFLDNAPERLIEVLVLKGREDKRLMPLLNELQ
                     RLGVAIQQVNRQTLDNKSQGEVHQGIIARVVPQKELNEHDLEAILSQKKNPLLLILDG
                     VTDPHNLGACLRTADAAGVDAVIVPKDKSAQLTPTARKVACGAAEVMPLIRVTNLART
                     MRDLQERHNVWIVGTAGEAESGIYEAKLTGSIALVMGAEGDGMRRLTREHCDQLISIP
                     MAGSVSSLNVSVATGVCLFEIVRQKLAGQ"
     gene            complement(31999..33366)
                     /gene="pssA"
                     /locus_tag="PXD69_000458"
     CDS             complement(31999..33366)
                     /gene="pssA"
                     /locus_tag="PXD69_000458"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDL6282695.1"
                     /translation="MLILNKQRKAEYLLKSLPYLPQVAEQVQFLASSKAFKQQILQLI
                     QTAKKRIYITALYFEKDEAGQEVLAALYQAKRNNPELEINILVDWHRAQRGRIGEAEN
                     LSNADWYAKVKYEQGLPAGQEIAFYGVSINGREVFGVLHLKGFVFDDTILYSGASINN
                     VYLHQFERYRYDRYHVIENKVLADSWVTFIQQHLLTNEAVKRLDTENRPKTAEIRAQI
                     KHFRKQLSREAYLFNGVAENGRLAVSPLVGLGRRKNQLNKVIEALFYQTEQKLTICTP
                     YFNFPHSLRTRIEWLLANGKSVEIIVGDKTANDFYTKPDEKFTMASALPYLYEKNLRA
                     FAKRLDGYVQNKQLTIRLWKDGENSYHLKGVWVDNRYILLTGNNLNPRAWRLDAENAI
                     LISDPQHQLSEKAETELNQICQHTQILTHYSDLEVLTDYPENVRKLLKKFGRVKLDKI
                     VKMLL"
     gene            complement(33436..34983)
                     /locus_tag="PXD69_000459"
     CDS             complement(33436..34983)
                     /locus_tag="PXD69_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HDL6282696.1"
                     /translation="MMKIIAFLFIFLSVFSHTALANSMAEQCVALKSNSPEKTAIYKA
                     EWVEKSAELPAYCLVQGEIGKRVEVDNVPYGIQFELRLPEQWNEKFLFQGAGGVGGVI
                     FPAIGKLYPHGASGANGLNRGYAVVSNDSGHATRDLVFTADPEARSNYAYASIGKVTT
                     VAKQLIAEFYRKPSKHNYIMGCSNGGREAMMAAMRYPQEFDGVIAGSPGFRVSRSVLA
                     EVWDNRALLAVAPKNGDGDKILSQALTQQDLDVIANGVLTRCDKLDGLADGLINAWEQ
                     CDFQPEMVAKQLGQKKVALIKTIFEGAKNSRGELIYSPWAYDSGINAKGWRDWKLGDS
                     QTAQPNSISFKMGLKSLTHYYLAPRVPSRDPLSVDLDQASEQVKAVGSIHDTDQVDLS
                     AFKQNGGKMLIYQGVSDPIFSAVDLKNWYQSLQQAVENPQHFAKLFFVSAMNHCGRGA
                     TVNDFDMLTALENWVEKGLEPESIAAKAGELYPNKAKQIPLCAYPKVAIYQTGEDPNR
                     LTSYQCR"
     gene            complement(35108..37924)
                     /gene="ileS"
                     /locus_tag="PXD69_000460"
     CDS             complement(35108..37924)
                     /gene="ileS"
                     /locus_tag="PXD69_000460"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDL6282697.1"
                     /translation="MTIDYKNTLNLPETGFPMRGDLAKREPDMLKNWYDKNLYQKIRT
                     ASKGKKTFILHDGPPYANGNIHLGHAVNKILKDMILKSKTALGFDTPYVPGWDCHGLP
                     IELKVEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNF
                     NTEANIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFNAV
                     DVNAVEEKFNAQGKGRGALSAVIWTTTPWTIPSNRAIAINPELDYALVQLGDERVLLA
                     VDLVEDVAKAAGVESAEILATTKGENLELLRFNHPFYDYSVPFIFGDHVTTDGGTGLV
                     HTAPDHGADDFVVARKYNIEMAGLISNDGKFKADTPFFAGLGVFESNDKVVEKLQEVG
                     ALLKLSRIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKSVRWIPSWGE
                     ARIDTMVANRPDWCISRQRTWGVPMAMFVHNETEELHPRTLELIEEVAKRVEEKGIQA
                     WWDLDPAELLGEEAKDYRKVPDTLDVWFDSGSTYASVVEQRPEFNGNSADMYLEGSDQ
                     HRGWFMSSLMLSTATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGAD
                     ILRLWVASTDYTGEITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKSDLVQPQEM
                     IALDRWAVACALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTK
                     ADSLARRSCQTALWHIAEALVRWIAPILSFTADEIWGYLPQVEGRSEFVFTEEFYTGL
                     FGLTEQDKLDDAYWQQILKVRAEVNRVLEQARKDKVIGAGLEAKVTVFANDEIRPLLE
                     QLGNELRFVLITSQAIVKPLAEADIAEGELAGLAVKVENADGEKCPRCWHYATDIGSH
                     SGHEEVCGRCVENVAGEGEKRLFA"
     gene            complement(38027..38989)
                     /gene="ribF"
                     /locus_tag="PXD69_000461"
     CDS             complement(38027..38989)
                     /gene="ribF"
                     /locus_tag="PXD69_000461"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDL6282698.1"
                     /translation="MQLIRGFHNLDKHIALNQGCVLSIGNFDGVHLGHQNILARLCDR
                     ALDLGLPSVVMLFEPQPREFFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCV
                     RFSEKFAQISADDFISDLLAKRLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAV
                     EESHTHSLNEERISSSLVREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPT
                     ANIMLNRLVTPIQGVFAVKVKTKQGSFNGIANVGNRPTINGTKPLLEVHIFDFNASIY
                     GEAIEVIFLKKLRNEIKFPDFEALKAQIEKDRLQAVEFFKEFAR"
BASE COUNT        11127 a         8985 c         7748 g        11253 t
ORIGIN      
        1 ctttttgaac agaaatctgt acgcagtcat tacgatgaag aaaaagataa atggtatttt
       61 tctattattg atgtgattgc tattttaacc gaaagcctag atccctctgc ttattggcgt
      121 aagctaaaac agaggctaaa ggcagaaggc aatgaaaccg tgacaaattg tcacgggttg
      181 aaaatgccct ctgctgacgg aaaaatgcgt ttgactgatg tagcagatac cgaacaactt
      241 ttccgactta ttcaatctat ccctagtccg aaagcagagc ccttcaaaca atggttagca
      301 aaagtaggtt atgaacgctt acaggaaata aacgatccaa gtcaaagtct agatcgagca
      361 agggagaatt ggcagaagat gggacgaagt gaaaaatgga ttcagcaaag aatgatggga
      421 caagaaaccc gaaataaact gaccgattat tggaaatcgt caggggttga acagccacaa
      481 gattttgcat ttttaaccaa tgtgattcat caagaatgga gcggactatc tgtacaaaag
      541 cataaatcgc ttaaaggttt aaaaagccaa aatctgcgag atcatatgag cgaagctgaa
      601 ttgttattta cagcacttgc tgaactttcc agtcggcaaa ttgcagaaag tatgcaggca
      661 gttggggttg atgaaaatgc ccaagcagga aaacaaggtg gcaatattgc caaaaatgcc
      721 cgtcaggaat tggagaataa aacaggtaaa tcagttgtta ccggagagaa ttttttacct
      781 ccagctaaaa atgaagaaga atagacacaa tagatgttct taattagtca aggtcgagcc
      841 tcccccaacc ttgaccacaa acttgcaaaa aatagccaaa atcacaccgc ttgcaagtta
      901 aatagattgt gccgctaccg cattttggta gccgaattgt cgccacgcct catacacaac
      961 caccgccacc gagttagata aattcatact gcggctgtct ttgcacatcg gaatgcggat
     1021 tttttgcgac atcggcattt ccgctaataa tggctttgga atgcctctgc tttccggccc
     1081 gaacattaaa aaatcgccaa gttcatattt cacatcactg tggttctgct cccctctggt
     1141 ggttaaggcg aacaagcgtt taggcttagc acgctcaagg aaatcttcaa aatttttata
     1201 tttttgaata tccacaaatt cgtgataatc cagccccgaa cggcggagct ttttatcgtc
     1261 ccaaccaaag ccgaacggtt caatcatatg caaacgaaag ccacagttgg cacaaaggcg
     1321 gataatattt ccgctgtttt gcggaatttc aggttcgtat aaaacaatat ctaacatttt
     1381 ttagccttac tctctcccct tgtgggagag agaccgaaaa atatttcgtt cagaaatatt
     1441 tttcagagag agggggaaat aactctttca tcagtaactt cttaccctct ccctgatttt
     1501 tcttctgaac gaagaaaaat ctatccctct cccacaaggg tcgagggtat tatctataca
     1561 ttcttcacaa tccaacaatt atggatttgc ggattgcgtt caaaatccaa cggtaaggtt
     1621 ttatgcgaaa tattttccgc cgttaagcct aatgctgcca aaccgtcaaa atccatttta
     1681 aagccacgct tattgttcga gaacacaatg gtaccatcag cggttaaaat acgtttaagc
     1741 tgtttcatta actcaatatg gtctcgttgc acgtcccaac tgttttccat tcgttttgag
     1801 ttggagaaag tcggcggatc gacaaaaatc agctcaaatc gctcacggca ttctgccagc
     1861 cattgcaagc aatcggcttg gaacaaacga tgatggcgaa gtgataaatt attcagctct
     1921 aaattttgct ccgcccagtt caaataggtg ttcgacatat ccactgtagt ggtcgatttt
     1981 gccccattaa gagcagcgtg aaccgtagct gaacccgtgt aggcaaacag attcaggaat
     2041 gttttgcctt ttgccatttc gcccaccatt ttacgggtta agcgatggtc taggaacaaa
     2101 cccgtatcca agtaatcggt taaattcacc cacagtttcg ccccatactc gttcacatag
     2161 aaatactcgc ctttattggc aagtttttcg tactgattcg tgcctttttg tttttggcga
     2221 actttcaaca ctaatttatt agtttcaaca cctgtcacat aaagcgtagc agagactgca
     2281 tctaacaagc gttggcgggc tttttgctca tcaatatttt tcggggcttg gtattcctgc
     2341 acaacaatgt ggtcgccata tctgtccacc gctaaattat attcaggcag atcggcatcg
     2401 tataaacggt aggcatcaat gccttgttgt ttcgcccatt tttcgatctt tttgatattt
     2461 ttggttaagc gatttgcaaa atccggagcg acttgagcat tctgttcaaa ttgtaaattt
     2521 tcatctaaat ctgaccgctt gttatgctcg ctgatggagt aatttttctg cacacaatcc
     2581 aacggaccgt ttttcgcttt gaattgacgg gctgaacgta aacgcaggca atttaacaat
     2641 tcaggctcgc cgctaaaaat tgaggcattc caaccggcaa attgctgttt taggcgttgc
     2701 ccgaacaccg aataaagagc aattaacgcc ggcgttgtgc ctaaacgttc accataaggg
     2761 gggttacaca ccaccgtgcc gattttttcc ggaatcggat tttttaacgc agccacatca
     2821 ccttgttgcc attgaatgag atgatctacc cctgcatttt tcgcattttg ctttgcttta
     2881 gtcagcacac gatgatcgag atcaaaaccg aagaacattt tttgtaggga cgaattgcaa
     2941 ttctccccta ccgcacccaa ttcaacattt cggaatgcct catctaacac ggctttccac
     3001 atcgcttgtt gatgcccttt ccacgcatta aagccccaat gtttacggtg aagttgaggg
     3061 gcaatattcg ctgccatttg tgctgcttca atcagtaacg tgcctgaacc acacatcgga
     3121 tcaaccaatg gcgtgccgac tttccagccg gaacgcaaaa taatggctgc cgccaatgtt
     3181 tcacgcaacg gagctttacc ggtttcttcc cgatagcccc gaatatgtaa ggcatctcca
     3241 cttaaatcaa gcgaaaccac aacattttca cgatccaaat aaacatgaat gcgaacatcc
     3301 ggattatctt tatctactgt tgggcgggca aaacctttgc gttcaaagta atccacaatg
     3361 ccgtctttca ctcgcattgc cccaaattgg gtgttgcgga tttctcggtt agtgccgctg
     3421 aaatcaatgt aaaaggtatc acggggatcg aataaatccg cccagttaaa tgacacgatg
     3481 gaagcatata aatcgctatc actaaaaatt ttggtgctga tgagcggcag taagatccga
     3541 gaggctaaac ggctgtgtaa taatgcctga taagcccctt tttgcgtggt ggtaaaatgc
     3601 acaccgcctt gagcgacttt gcattctgcc gcacaaatct gctccagttc ggtttttagt
     3661 atttcctcaa aaccacgggc tgccgtggca aaataggttg tttgatttgt cattcttttc
     3721 acacttgaaa taaaaattgg cagtaattat agccgaacaa gcggtctttt tcttgcaaag
     3781 ttttgcaatt tcttttttag ttaaaaatta gctaagatca aaaaagcggc atttagtaaa
     3841 tccctaaact tgctattttg aattaataat tgcaaaatta accgattaag agaaaggaaa
     3901 ggagaaataa atgacagctc caactcaaat tttactcatt gacgaccacc cattaatgcg
     3961 tcagggaatg cgtcaactat tggaattaga tcaccaattt agtgtagtgg gtgaagcaag
     4021 caacggcacc gacggtatca aacttgcatt acgacttgag ccggatgtga ttattctgga
     4081 tttaaatatg aaagggcttt cagggctaga tactttacgc tcattgcgcg ctcaaggtat
     4141 agatgccaga atcattgttt taacagtgtc agacgagcaa tccgatgtat ttgcattaat
     4201 ggatgctggt gtggacggct atttattaaa agataccgac accccggaac tactagataa
     4261 tatccgtaaa gcggctgccg gtgaagtggt attaagcgaa accgttcgcc aacatttact
     4321 caaccgccag ccagaaaatg atcctttaag ttgcttaaca gatcgtgaac tggatgtttt
     4381 acaatggctc gcaaccggta tgtcgaacaa acaaattgcg gctcagctct ttatttccga
     4441 agaaaccgta aaagtgcata tccgcaattt actgcgtaaa ttaaacgtgc attcccgagt
     4501 tgccgccacc gtgctttatt tggaacagca aaaaggctaa ttgaaatcgg ataaaaaacg
     4561 ctgaataact tcacattatt cagcgttttt gtttattgtt tggattgaat gccttaaaac
     4621 taattcaggt tcaagcatta tggtttgaaa atcagtggat ttaaaacgaa ttcgttttag
     4681 caaagtttcc accgcaagcc gcccgagttc cgctttgggc tggctaatgg tactcagcgg
     4741 tggggaaagg tattttgcca gttcaatatc gtcatagccg ataatcgaaa tatcttgcgg
     4801 tattcgtaaa ccttgttgcc agattgcttg gtaagcccct agagcaatgg tgtcgctaca
     4861 ggcaaatacc gctgtcggct tttcgctttg ggcaagcaaa gcattcattc cattaacccc
     4921 gccggcaaaa tcaaaatggc tttcgaacac ccagtttgga ttgagtggaa tattcgcctc
     4981 ggcaagtgct tttttgtagc cttctaaacg attttttgcc aatgattttt ttaggtttcc
     5041 agtaataatc gcaatcttag aatgccctgc ttcaattaag gtttttgttg cgagatagcc
     5101 gccggatatt gaattttcaa agattttatc tgcattgagc tcggtaaacc accagtctaa
     5161 caccaccaat ggcagcggaa tattcaagct ctcatcggca ttcaatctgg tatcgccaca
     5221 catcagtaac aagccatcta cttttcgttg catcagcatt tgcaaatggt gttgcaaacg
     5281 ctcggtgtca ccgttggtag tggcaataat caggttatat tgatgttgct ggcaatattg
     5341 ctccaccccc gccatcacct ccgcaaaaaa cggattgccg gttgccgtta ccagcattcc
     5401 gatggtttta gtttcattca ctttgaggct acgagccaat gcagaaggcg tgtaattcag
     5461 ttctttcacc accctctgca ctctttcccg aatttcctcg ctgacaaatc ggctattgtt
     5521 gataacgtga gaaacggtcg aggtggaaac ctgtgcaagc cgtgcaatat ccttcattgt
     5581 tgccatttgc aaaattttcc taaaaactca ccgcttgttg gcttagaaaa tccagtgttt
     5641 cctgacgggt cggaatagaa ggttgagccc ctttgcgagt cacactaatc gctgccgctg
     5701 cgtgagcaaa acgaatggct tgatccagcg gtttatcttc taacattgca gtcactaatg
     5761 ctccgttaaa agtatcccct gcggcagtgg tatccaccgc ttgaacacgg aagcctgcaa
     5821 cgattttgcc tacaccgttt tcgcttacaa ataccccttt tgagccaagt gtaatcaaca
     5881 ctttttcgat gcccttttgg tgaaacactt gtgcggcttg aatcgcactg gcttcatcaa
     5941 caactttcac accggttaat atttccgctt ccgtttcatt tggggtaatc atatccagta
     6001 agtttaacag ttcatcgggt aacgctcgag caggcgcagg gtttaatatt actttcgtgc
     6061 cgttttgctg agccaatttt gctgcttgca caatcgccgg caacggtgtt tctagctgca
     6121 ttagcaaata atccgcctgt gtgatttcgg ctgcacactt tgccacaacc gtttcatcca
     6181 aatgaccgtt cgctccggct gaaatcacaa tactgttctc gcccgattcc gccacttgaa
     6241 tcattgcaat gccggtcatt tcattcggaa tcgttttaat cgagcgagtg tcaatgccat
     6301 cttgctcaaa ggctgatttc attgctttgc cgatgtcatc actgccaata caaccgatga
     6361 aagaaacctt agctcccaaa cgtgctgccg ccaccgcctg atttgcccct ttaccgccat
     6421 aagcaatgtg gcagctatgt ccggtgagcg tttcccccgg tttggcaaaa tagggaacgg
     6481 aaatcacgtg atcagcgtta atgctaccga gaacggtgag ttttttcata ttaagccctc
     6541 aaattaccta gtacaacaaa actaggattc tgatagcact agtctctgac gagtgctatt
     6601 ttattaattc aaagcgttcg tcagagacga acgctatctt caagtataat tattttgaaa
     6661 taacctttaa atcaaccgga atttttgctt ccactttttc gccttttagc actttatcgg
     6721 cagtttctac gcctaatgag ccaatcagtt caggttgttg agcaatcgtt gcggcaagtt
     6781 taccgctttc aacggctttt acgccatcat ctgtgccgtc aaagcccaca attacaacct
     6841 ctttcttcgc tgaactcact gcacgcaaag ctcctagtgc catttcatca ttttgagcaa
     6901 aaatagcttg tacgtcccct ttgcttgaga gcaagttttc agtcacattt aagcctttag
     6961 tgcggtcaaa atcagccggt tgactggcta atacattgaa tttatgtgct tcaatcgctt
     7021 gtttaaagcc ttcaccacgt tcacgagcgg cggaagtgcc ggcaatgcct tctaattgaa
     7081 tcactttcgc ccctgagcct aatttctgag caatgaaatc tcccgccatt ttgccgccgg
     7141 caacgttatc ggaagcgata tggctaacca cttcgccttt tgctgcacca cggtcaagtg
     7201 taataaccgg aattttgttg cgatttgcaa tagccaccgc atttccgacc gcttccgaat
     7261 cggttgggtt aatcaataac acttttgccc cacgcaccgt taagtcttcc acattggaaa
     7321 gctctttagc cgggtcattt tgggaatcaa gcaccactaa tttgtagcct aattcatctg
     7381 cttttttctg tgcaccgtct ttaaggctca caaagaatgg gttatctaaa gtcgatactg
     7441 caagagcgat agtctctttt gccgaagcag tggctgcaac cgataaactt aacataaccg
     7501 ctgatgcaat cgtagttaat tttttcatag aaatctcctt taaagataga ttaaactttt
     7561 ttagtgccta gataattatc agctaataca gctgctaaaa taaccaacgc tttagcaatc
     7621 atctgataat atgaagaaat atccaataaa ttaagggcat tgtttaagaa accgataatt
     7681 aatgccccga caagcgttcc cattacacgc cctttaccgc ccattagact ggttccacca
     7741 acaactaccg ctgcaattgc gtctaactca taggacacac ctgccgttgg ctgagcagaa
     7801 gagagacgtg aagtcacaat taagccggca agagcagata aaaaaccact cacggcaaat
     7861 acgaagatct taattttatt cacattgatg cctgaaagct gggttgccga ttcgttgcca
     7921 cctaaagcgt aaatgtaacg cccaatcggg gtgtgtttca aaatatacca agctaaccca
     7981 aacactaccg ccataatcca aatcggcaca ggaataccaa ataaatagcc tgtcccaata
     8041 aacgcaaagg cgtctgcttg gtcagaaaag ccggtgctaa tcggtctgcc atcggtataa
     8101 accatcgtaa tcccacgcaa taaggtcatt gtgaccaaag tcgcaataaa tgcctgcact
     8161 ttacctttag caacaatcgc cccactaata ccaccaaatg ccgtccctaa taataaaacc
     8221 agcggaatca ccaacaaaat cggcaattca gaaccgacta aggtcgctgc aaccgcaccg
     8281 gttaaggcta aaaccgaacc gaccgataaa tcaatgcctg caattaaaat cacaaaggtc
     8341 attccgaccg caataatcgc attcaccgag gtttggcgta gaatatttaa aatattatcc
     8401 acgctgaaaa aatcagggtt aatcattgaa acactgacaa ttaaaataaa taacgctaca
     8461 aaagaacgtt gctcgattaa aaatctgcca agttgaaact gctttgtttg agttgccata
     8521 aacacacctt aatttaatcc tgtacttttg ccaatagctg ctgccagtag cttttcttgt
     8581 gtcgcttctg ctcgtgaaaa ttctgcactg atttgccctt cgtgcatcac taaaatgcgg
     8641 tcgctcattc ccaacacttc cggcatatcg gacgaaacca tcaaaatact aagcccatct
     8701 tttttaaatt cattaattaa ttgatagatc tcttttttcg cccccacatc aacaccccgt
     8761 gtcggctcgt ctaaaatcag cacattcggg cgggtcatca accctttagc gatcgccact
     8821 ttttgctgat taccaccgga aagcagcccg atttgttgct cccgacttgg ggttttaatg
     8881 ttaaacatct caataaaatc atcgaccgcc aatttttctg catcgtggcg aatactgccg
     8941 gctttggaga aatgatcgag agaggtcaaa gacatatttt cttttaccga cattcccaaa
     9001 atcagaccat cgcctttacg atcttctgaa atatacacaa tgccgttatt caacccatct
     9061 tgcggacaat ggttggaaat cgcttttcca tttaactcta tcgagccggc tgttttcggc
     9121 aatgcaccat aaagcacctt cattaattct gtacgccctg cccccattaa gccggaaata
     9181 cccacaattt cacctttgtg taattggaat gacacattat tcaccccact tccacttaaa
     9241 ttcttcactt caagtaataa ctcgccacgc tcttggtgta aatgcggata ttgctcttcc
     9301 aaacggcgac caaccatcat ttcaattaac tgatcttcat caatatcggc aattactcgc
     9361 tcgccgataa attgcccgtc tcttagcacc gtcacatcat cacaaatttc aaaaatctct
     9421 tttaaacgat gggaaatata aacaatgcct cgattttccg cttttaactc tcgaataact
     9481 ttaaacaacg atgctgtttc tgtatcggtt aaagcatcgg tcggttcgtc cataataatt
     9541 acttgagact caaaactcag ggctttcgca atttccacca tttgctgctc gccaatggat
     9601 aactccgcac aaagctgatg gctactgtgt tttaccccaa gtcgggcaag cagtttatcc
     9661 gcctcggcat acattttttt ccaatcaata gctccccaag cggttttgga ctcacggccc
     9721 aaaaaaatat tttcagcaat ggttaaatta ccgactaaat tcagctcttg gtgaataatg
     9781 ctaataccgg cttcttgtga atctttcggg cctttaaagg taacttcttt gcctaaatag
     9841 ctaatagagc cggcatcttt gctataaatc cccgtcaata ctttcatcaa ggtggattta
     9901 cctgccccat tttcgcccat taatgccatt actcgcccac cgtaaacaga taagcacgca
     9961 ttgctcaagg ctttcacgcc gggaaattct ttatctatcc cgctcatttt taataaggtt
    10021 tccatcattc caccctaaaa cggcacgccc gaatataaaa taatattggc atacggtgaa
    10081 cactcacccg aacgcacaac agctttactg taatgtgtct gctctttaaa gatttcgtgg
    10141 ttcacataat caatttgaat tttattctgt tgagtttgtt ctaattgggt taaacgctcc
    10201 aaaagagctg ctaacacttg cggattttta tgtttaattt cttcagcaag tagcactcgt
    10261 tcaacaaata attcactaac tactacatca aatgtttgta aaaaacttgg cacaccggcg
    10321 gttaaagcca aatcgatccg ctctattgtg tttggaatcg gcaaaccggc atcgcaaacc
    10381 gttaaactat cggtatgccc gagtgtcgca atactgtgcg aaagttgtgc atttagattt
    10441 agcgtttttt tcatactaac ccctttattt tcgctccatc acgttggaaa atactccatc
    10501 gaaacgtttc gatggcatca taaaaaattt tcttaatcgg ataaacaacc aaattgcaaa
    10561 aatgtgaagt agttcaaatt attttgcttt ataataggta gcatttagtg acaagcggta
    10621 agatttgcaa atttttttgc aaaatcgacc gcttgtttaa tttttatttt ctcaatataa
    10681 actatggctt tattaattac ccacaaatgt accaactgtg atatgtgctt gccggaatgc
    10741 ccgaacgagg cgatttcggt gggcgatgat atttatatca tcgatccggt gttatgtacc
    10801 gaatgtgtcg ggcattatga aaagccgact tgccagaaag tttgcccgat taccaactgc
    10861 attatcaaag atcctgataa tatcgaaacc gaagagcagt tgtgggaacg ttttgtgatg
    10921 attcatcacc ctgatcagat ataaaaaaac ggtcataccc tgatgaccgt tcgttttact
    10981 cattttctgc caaactataa ggtaactcga ccatttccaa cgctacacca ttggctctaa
    11041 acttggtgtt aggttcaaca tctttattca gcaccacttg cacccacagg gtattttcat
    11101 cagtcgcact ggtcaacaca gtgccggttg ctcgccaatt ttcgcccagt tgcatttcaa
    11161 tcgcagaagc aacttccggt aagctgattt cgctttcaaa gttgccggca agggtaaata
    11221 aagcacgttt attcgcccca cgatatttcg ctctcgctac cgtttcttgc ccgatgtagc
    11281 aacctttggt gaatgaaatc gcagattcaa gtgcctgtaa attggttgcc tgtggaatca
    11341 gctcaaactg gttttgttgc aagagaacag gaatgccgtc ttgaatatcc attaatgtcc
    11401 agagctgttc atcggcagtc gtttcaagct cttcgcccca aacaatggcc cgaggctgtc
    11461 ctgtggttaa acgcaaagcg gtcatatttt cgcttaattt tgcaaatgct gcttcacctg
    11521 ccataccata aagtggggtg tctaattccg tgaaggtcac ttttgaaaaa accgcatatt
    11581 ttttaagttg cgtcagggct tcaggcaata agctgcggtg aatgatcgcc ataaatttct
    11641 cattttctgc acgatacaaa cgcagtaacg cactcatttt gcctttcgga tcacaatggc
    11701 tggttagcgt atgttcgccc accgaaattt ttgccacatc gcaggttaat tgcccttgaa
    11761 gatatttctc agcatctacc cctgcgattt caattaaaca atactgagaa agcggcacgc
    11821 agagatttgg atagctctgg ctcacttgct tgaaattcat tgccataatc tgtcctattc
    11881 taaattctga atttgttcac gcatctgttc gatcaacact ttcagctcca ccgccgaatt
    11941 ggtcacgtcc gcattaatcg attttgaggc gagcgtgttg gattcacggt ttagttcttg
    12001 catcataaaa tccagtttac gcccaaccgc accgcctttt ttcaggatat tggtggtttc
    12061 tttaacgtgt aattgcaagc ggtctaattc ctccgccaca tcaacacgtt gggcaagtaa
    12121 caccatttct tgttctaagc gttgtggatc aagctgtaaa ttcagttcat cgaaccgttg
    12181 ttgtaaacga tctttctgcc attgcagaat ttccggcatt tgggcttgta cctttgcagc
    12241 ctcaactgaa attgcttcta aacgttgtaa gatcagggct tgcacgttct cgccctctct
    12301 ggctcgcatt gcgataaaat ctgccagaat ttgttcaaag ccggctaata aatcttgagc
    12361 aatttggtct aaatcttggc tttcattatc caccacgccc gggaaacgta gcacatcaac
    12421 aaggttgatt tcgccttcat ttgcggtttc ttttaaccat tttaatgatt gaaccacctg
    12481 tgcggcatat tctttgttta acgcaatttc actgttttgg gttttgctta aatcaatgcg
    12541 taagctacac tctactttgc ctcgtgtcag tgcagaacgt aaacgctcac gcaaggtcat
    12601 ttctaggttg cgaaactgct ccggcaaacg aaaataggtt tctaaaaagc gttgatttac
    12661 cgagcgaatt tcccacaccg cattgcccca ctcttttttc atttctaaat gggcaaatgc
    12721 tgtcatacta taaatcattg gtattccttg tgtttttata agtaaagctc tctccccttg
    12781 agggagagag accgaaaaat atttcgttca gaaatatttt tcagagagag ggaggaattt
    12841 gtaaaatttg agataaaaat aaccgcttac ccctctccct gatttttctt ctgaacgaag
    12901 aaaaatccgt ccctctccca caaggggcga gggctatgta aattctttgc taaagaaaaa
    12961 tcacatttta ctgtgttctt tgctaaaatg gtaaaaattt tagcaaaagg aaaagaaaat
    13021 gcgtccaaat aatcgagcaa acaaccaagt tagagaaatt aaaattaccc gtaactacac
    13081 tcgctatgcc gaaggctcgg tattaattga gtttggcgaa accaaagtat tgtgtaacgc
    13141 tacggtagaa gaaagcgtgc cacgcttttt aaaaggtcag caacaaggtt gggttaccgc
    13201 agaatatggt atgttgccac gagccaccca ctctcgcact cagcgtgaag cggcaaaagg
    13261 caaacaaggc ggacgcacaa tggaaatcca acgcttgatt gcccgttctc tgcgtgcggt
    13321 ggtagattta aaagccttag gcgaacgtac cgttaccgta gattgtgatg ttattcaagc
    13381 cgatggaggc actcgcaccg cctcaattac cggtgcgtgc gtagcattgt acgatgcaat
    13441 gaataagtta gtagctaatg gaacactaaa aactaaccca atgaaaggtt tagtcgcagc
    13501 aatttctgtc ggtattgtag caggcgaagc ggtgtgcgat ttagaatatc tggaagattc
    13561 caacgctgaa actgatatga acgtggtgat ggtcgaagat ggtcgtttag tggaagtaca
    13621 aggcacggca gaaggcgaac cgttctcgca ccaagaatta ctgacattgc tagatttagc
    13681 gaagcaaggc attagccagc tagttgaagc tcaacgtaaa gcgttagctg aataattcac
    13741 ttctcttttt gattttcttt ttaaataaaa tctacatctg acaaaacaga ataaccgttc
    13801 tgattcagat gtagattttt ttatttccct tttcaaaata cactcaatca taaaataaca
    13861 attatttttt tatggaaata ttgcacttct tacaaaatat ctgtaaattt cattgccatt
    13921 atttttttat ggctatttat tctagaagga ctctaaacgt gttaaagaaa aattatctca
    13981 ctgtatcaat tctccttgcc attagtggag taggctacgc taatgaaatc tctttagaga
    14041 ctattactgt tgatggaaat acgccttcaa ccaaagggaa attactaggt ggtgaactaa
    14101 atagcaatga atctgttgtt gatgaaaaaa attaaaacaa ggtagtatta cattaggtaa
    14161 cgctttatct ggtgaattag gcattcattc aagccagttc ggaggcggtg caagtacccc
    14221 aattattcgt gggcaagaga gtaaacgtgc aaaaatctta caaaataatg gcgaaaactt
    14281 agatatgtcg ggaatgtctc ctgatcatgc agtaaccgta gatgcgctac ttgctaaacg
    14341 tattgaaatt ttacgtggtc caactacttt actttacagt gcaggtaata cggcaggtgt
    14401 aattaatgtg gtagacaata aaattccaac cgctattccc gaaaaaggct atgaggggca
    14461 atttggtgtg cgttttggct cagccagtaa agagcgttta acctatgcag gctcaacctt
    14521 tgcccttgga aatcatttag ccttgcgggt acagggaatg tataacaaag cttccgaata
    14581 ctatgctcca cactttacga ttgaaggcaa accttaccac cgcgtaccag atagcgatgt
    14641 acaatcacaa accggcacag taagcctttc ttggattgga gagcgaggac atcttggtat
    14701 tgcttacact gatcgccgtg ataaatatgg attaattggt cacacacaca aatacgatca
    14761 ctatactatt agtattattc gccaagccgt tatgtttgca aaaggttatt tacgttttta
    14821 tccgcacctt gcagaagaag gagatattga ctataacaac cctggtatcc gtttactgca
    14881 tactcatatt ccgggaggct cacattatgg acaagatact cacgagcacg gcaaaccttg
    14941 gattgatatg cactccaagc ggtatgatat tgatggaagt ttgcaaaatc cacttcctgg
    15001 ttttgaagaa gccaaaatat cagctaacta tgtagattac tatcatgatg aaaaagatgg
    15061 aaaaagagtt gaaaattact tcaagaacaa aggaaaaaat ctacgtttcg aattggttca
    15121 caaagagtgg aaagggctaa aaggagctat tggtgtgcaa tataccaacc aatctacctc
    15181 agcacttgca cttgaagctt cacgagctgc aaaagtattt aataaacagc ctttactcaa
    15241 taatccaaaa acaaaattat ggagtctctt tgcgattgaa cgccttaatt taggtgactt
    15301 tacctttgag ttaagtgggc gggcagaacg tcaaaaaata gcaatggatt atgatgtgaa
    15361 attaattgat cgctggctag gctttaatac acctatgcca aacttggacc cacataaaga
    15421 caaaggttat tcttatagct ttgcaactca ttggtatttc gcaccaaacc ataagttaac
    15481 attaaatgct gcacatcaag aacgtttacc taatgctcag gaactctatg ctcatggtaa
    15541 acacattgct ttaaatgcat ttgaggctgg caataaaaat ctaaaaaaag agcgttctaa
    15601 ccaaattgag ctatcattag cttatgttgg cgacaaatgg gattataaat taaatctcta
    15661 ccacacccgc tatggcaact atatttaccc attaactctt aatgataatc gtggacctaa
    15721 atcttttacc gatgaatata acttgaaagt gaatagatat tatcaaggcg aagctcgttt
    15781 tagtggggca gaaggcgaaa ttggttatct atttacacca aattatcgct tagccgtatt
    15841 cggagactat gtccgtggaa agttagtcaa cttacctaat attgcaatga gttacaacat
    15901 ttggacaggt gaagttgaca aatgggcttc tcagccagac atttctgcac ctcgtatacc
    15961 accactacgt ttaggagcaa gatttaatgc tgacttcaac ctaaactggt ctggaatgtt
    16021 agaatattac cgagtatttg ctcagaaaaa agtctcgaaa tacgaacaag ttacccctgg
    16081 ccatcatcaa gtaaaccttg gcgtaaccta tagtaatcat tttaatcaaa cagaatacca
    16141 agtattcctt aaagtggata acttgcttaa tcagaaaatg taccaacatg cctcatatct
    16201 accacatatt ccacaaatgg gtagaaatgc aatgcttgga atgaatatca gtttttaatt
    16261 tgtaaatctc tacaaaaata taaccgcttg taaatttcta tctacaagcg gttactttca
    16321 gtggattttt tgcaattaga gatcgtcaat taccaagtaa attttattta ccgggccgtg
    16381 aacgccaact actttaatca actcaatatc cgcagtcgcc gatgggcctg agatgatatt
    16441 cacacaagat ggcattcttt cacctcgttg ggctttttcg tgcagaattt gtgcaagctg
    16501 tgccacacga ggtaacactg tacttttgcg taacacaacc accgattttt cgggcaataa
    16561 gctcactgaa cgcccaaatt ctttatcgga aaacagtaca ataccgccag actctgccaa
    16621 gccatattca ccgtaaacca caccgatatt agcagttctg gctttttcaa agttggtttc
    16681 agcttggttg aaatcccaca catagctgtc ttcgtatttt gcttgaatgg ctgcggtaat
    16741 cccaagatcc tttaaacgtt gatcgttatt cacgatcaca ctcgccccgc catatttttc
    16801 acaaatatca ataatggctt gtggtaaatc cgcctctttt gcctctacta catctgccat
    16861 catcactcgg gcaaaatcga taaactcttg gcaaagttgt ggttgagggc gatcggttaa
    16921 acgggtaatc gcgtggttgt tttccaacac aggaattggc tcaggcacat tttggcgtgg
    16981 tctgcccata cgctgtgcca atttatttaa gaaattttca cgattttgta aatccatttt
    17041 cttatcctct gttattaaac cattcacgga aactttcgcc ttcggcagtc ggtaaatcac
    17101 gggctttcgt ccattcacct aacgccccaa aattcaccgg tgctttgccg tttttaatca
    17161 atttgcttgc cactttcgcc cccactttta cgccgacttt ccaaagggtt gggtgtgagt
    17221 tagcgaagtt aaagccaaaa atagacaagc gttctgccat tggcgttaag ccggcatccg
    17281 caattttctc acggtgtttt aagataagct gtgccagtgg aattttcact ggacaaacac
    17341 tgttacaagc ggtacaaagt gagcaagcat acggcaattc tttaaactct tcgtagccac
    17401 cgagcaatgg cgaaataact gaaccaatcg ggcccggata gattgaacca tagccgtgac
    17461 cgccaatttg gcgatacgcc gggcaagtgt tcaaacatgc accacagcgg atacaacgca
    17521 acacttcttg gaattcgctt tctaagattt tagaacgacc gttatcgaca atgaccaagt
    17581 ggaactcttc cggaccatcg gtttcgcctt caagtctagg acctgtcagc caagtgttgt
    17641 aagcggtgag ttttgcccct accgcactgc gagccagcat ggtaattaat acatcaacct
    17701 ctttaaaggt tggggcgata cgttccatac ccattactgc aatatgcgtt ttcggcacag
    17761 ttgttgccat acgcagatta ccttcgttgg tcactaaaca aaccgagccg gtttccggca
    17821 ccgcaaagtt acagcctgaa ataccgatgt ctgcctctaa gaaatcttca cggatttttt
    17881 ggcggacgaa tgcagtcatc tcttcaggtg tttccgaacc ttgataacct agcacatcgt
    17941 gcatttcttg gcggattctg tggcgatctt tgtggattgc aggtacaaca atatgagaag
    18001 gtttatcgcc cacaatttgc aataaatatt cgcccaaatc ggtttcaacc actttaatgc
    18061 cttctgcttc taaaacgtgg ttcatcccaa tctcttcggt taccatcgac ttcgatttta
    18121 cgattttctt cgcattttta gctttcgcca cgtttttgat gtaatcagtg gcttcttcgg
    18181 cggtttcggc aaagaaaacg tgtccgccgt tttgggtgac tttttcgctt aattggtaga
    18241 gataagcgtc taaattggct aaaacgtggt tacgaattgc tttcgcatca tcacgccact
    18301 cttcccagtt gcccagctca tccaccatac gctgacggtt tgcaccgatt gtttcctgag
    18361 ccttaactaa ggctttacgc acaatctcgt tattaacttg ctgctcaaca cgttgtttaa
    18421 acggcagggt gttagtttgt aaataagaca tcttattttc ctccctgcat taacacttcg
    18481 gcaatgtgca tcactttgat tggcttacct tcacggctta aacgaccgcc aatgttcatc
    18541 aagcagctta catctgcccc gattaaataa tccggctcat cggtatctac atttgcgact
    18601 ttctctttta ccatctcgcc ggaaatttct gccattttga ccgagaatgt gccaccaaaa
    18661 ccacagcaag tttcttggtt tttgattggt aataactcta accctttaac gtgctgtaat
    18721 aaagcaatag gctcatcttt aatccccagc ttacggaata agctgcaaga cgggtgataa
    18781 actgctttgc ccggtaaata agccccaaca tctttcacgc ccagtttgtt cacaataaaa
    18841 tcggttaaat catagaaacg atcagccact ttcttcgcac gttctgccca ttctttttcg
    18901 ccaaagcgtt caaaatgatc cggataggtt ttgatcgcat atacacaaga acctgccggg
    18961 gcgacaatcg ggtaatcatt agcttcaaag gtttcaacca agtttttcat acctgctaaa
    19021 gcttgcttag tgtaaccgct gttgatcgca ggttgtccac agcaaccttg tttttctaag
    19081 aaagtgattt tacaacctaa tttttccaat aaaagcacag tattttttgc aacccctgct
    19141 ttcattacat ctgcaatgca ggttacgtaa aaattaacgt tcataaagaa ctcccacagt
    19201 aaatataaat aagaattaaa ctcaaaaaat gccgttctaa gacggcgaaa ggaagaggtg
    19261 gatttgcaaa aaatttgcta aatctcaccg cttcctttct aaatcaagta agctgattat
    19321 taactcatta taggttatag aacataggta ctataaacaa tgccgaaatc gcagcaataa
    19381 cgccatacac gaacattggc acggctgttt tcttaataat attgccttct tgtttctcaa
    19441 tgccggtaac agaacacaca gccacgatgt tgttaataca caccatattc cccattgcac
    19501 caccaactga ttgcaatgca agaattaagg taacagataa cccgacttgc tgtgccgttg
    19561 catattgtac tgttccgaag gttaagttag ataccgtatt tgaccctgag aagaacgcac
    19621 caattgcacc taagaacgag gcaaataatg tccaagattg accggtaaat tctgcgaagt
    19681 ttttaccaat gatctgaacc attgagtcta caccaccaat taacattaat tttaccatca
    19741 caatggcacc taaaagtgct aagaatggtt ttttcacttg tttaaatgaa gtgccaaaaa
    19801 tctcttgagt atttttacct gataccgaga aaatcggtaa gcaaattaat acggtcacaa
    19861 caaatggaat caacgcagga acatacagta atttatagct agttgctaca ttcgtaccta
    19921 aaatattttt cagtgcaaaa attaagcctt ggctaatttc aaagttagcg aaaccaagcg
    19981 aactgacaat ccaagctgtt gcatcattta gcattgcttt taatggaagt tgctgaatac
    20041 gggtgattac caaaatgaag atcagtaacc ctgttggtaa taatgctttt gccacttcac
    20101 caaaggtcgc tttatcgccg tcaaggtggt tctcgctttt cgctaaacca atacccatat
    20161 ttgctaccca gactgacacc aataaaccaa tcgccccggc aactaatgat gggaattcgt
    20221 agttaaattg agcaataatg aagtaaggaa tgacacaggc aaaaatgctg atataaataa
    20281 acacgatatt ttgacgaatt tctttccagc tcacaattaa acgcaatgcc ataactggaa
    20341 taataaacgc agcaatagag tggatcagtg cagtaataga accaatttca agcacttgtg
    20401 catcggttag taaaccatct tttaataatg gtcccatacc aaaccaagtt ggtgtgccaa
    20461 ccgcaccaaa tgacaccggc acagagttca ttactaaggc taacattgcc acttgtaacg
    20521 gtttaaagcc taaaccaacc agaattggag ctgcaattgc cgccggcgta ccgaaacctg
    20581 atgcgccttc aatcataaat gcaaatgccc aaccgataat catcaactgt gccaccggat
    20641 tcgggttaat tgtccctaac catttacgca tagtgttggt tgcacctgaa acttcagaga
    20701 aacggttaaa taaaatcgcc ccgaaaataa cggtaattgg ggttaataca tcacctaaac
    20761 cggcaataat attggcaaag attaacgtgg tatcattacc aaaataggta agctgaagca
    20821 caaaaattaa taacgccgta agtggtaaag ccacataaga cggtaacgcg ttacgtttta
    20881 ccattaaata aatgagcaaa acaattggaa atacgctcag gaatagagcc atactgcacc
    20941 tctttatatg attataaaat gacctaactg gtcggatagg tgcgaattgt actcttaaaa
    21001 aaaactaatg taactaggtt gttacaattt tgtgatctag ctcgcatttt taatgattgt
    21061 atggttaaaa aagagccata tttattttca tttaatactt aatagttagc cctatttaag
    21121 acatttttac cgaatcgagc aatatgcaat taattaacaa aaaaaggccg cttgtagatc
    21181 acagatcaac aagcggtctt ttttaggcaa aaatttgcaa attaaacatt gaaacggaag
    21241 tgcattacat cgccgtcttg aacaatataa tctttacctt ccaaacgcca tttacccgct
    21301 tcttttgcac cggcttcacc tttattgtct atgaagtctt ggtaagcaat tacttccgca
    21361 cgaataaagc ctttctcaaa gtcagtgtga atcacggctg ctgcttttgg agcggttgca
    21421 cctaccgaaa ccgtccacgc acgcacttct tttacccctg cggtaaagta ggtttgtaag
    21481 ttaagtaaac ggtagcctgc acgaataaca cggtttaagc ccggctcttc aatgcctaaa
    21541 tcttgtagaa attccacttt ttcttcgtca tcaagctcgg caatttccga ttcaatcgct
    21601 gcacacaccg gtacaaccac cgccccttct ttttcggcaa tttcacgcac acggtcaaga
    21661 taagggttat tttcaaaacc gtcttcgttc acgttggcaa tatacattgt cggttttaaa
    21721 gttaagaagt tgtagccctt aatagcgtgc agttcatcct tatctaaatc taccgaacga
    21781 atcataccgg cattttcaag cacaggtagg attttttcca taatcgataa ttcaaatttt
    21841 gcgtctttat cgccaccttt cgcacgtttt tgtaaacgct gaatggcacg ctcgcaactg
    21901 tctaaatcgg caagtgccaa ttcggtattg atgatttcaa tatcatcagc tgggtcaatt
    21961 ttccccgcaa cgtgaacgat gtcatcattt tcaaaacaac gcacaacgtg gccaatcgca
    22021 tcagtttcac gaatattggc taagaattta ttacctaaac cttcgccttt gcttgcacct
    22081 gccactaagc cggcaatatc cacaaattcc attgtagttg gtaacactcg ctcaggtttc
    22141 acaatttccg ccaacgcatc taagcgaggg tcaggcattg gtaccacacc ggtatttggc
    22201 tcaatcgtac agaacggata gtttgctgcc tcaatacctg ctttagttaa tgcattgaaa
    22261 agggtcgatt taccgacatt tggtaaaccc acaataccac atttaaatcc cattttttgt
    22321 tccttagaat tcccctctcc ccttgcggga gagggataaa tttgagcttc gttcagaagc
    22381 gaaaatgagg gagagggcga aattgcaata atttcctcaa atatgaccgc tcccctctct
    22441 ctgaaaaata cttctgaacg aagtattttt cggtctctct cccacaaggg agagagtttt
    22501 aatttgcttt aaaactattt aaacggttag ttgccttaac cattccgtct ttaaataaaa
    22561 cttctacgca acgtgcggct tcatcaaccg cactattcag taatgtctga tcgcttggtg
    22621 aaggcttgcc cagcacataa ttcgccacta agtctttatg ccccgggtgt ccaataccaa
    22681 ttcgcacacg gtaaaactct ttattattgc caagggcggc aataatatct ttcaagccgt
    22741 tatgaccacc gtgtccgccg ccttttttca atttcaccga accgggtggt aaatccaatt
    22801 catcgtgagc gaccaaaatt tcttccggtt taatccgata aaaattggct aacgctccca
    22861 ctgctttacc acttaaattc ataaaagtag tcggcactaa taaacggact tcgccttgag
    22921 cggtattaat ttttgctact ttgccaaaat atttcggctc ttcttttagg ctaacgttat
    22981 atattcgggc aagttcgtta atcagccact cgcctgcatt atggcgggtt tcttcatatt
    23041 ttacccccgg gttcgccagc ccgacaatta atttaatttc tgacacaatc ttgtctcaat
    23101 tcatttaatt taaaaggcag tattttagag aaaaaccgct attttctcaa ggcaaccatt
    23161 aatcatattg tctatacgga tttggtacgc attgatactt cgctaacatc gattcagtga
    23221 aatcggtgcg tgaagcagcg ttatcattgt ttaaactaac cacaccaatt cgcttgcctc
    23281 tgcaatcccc tttagcaata aaggcaagat tataacccgc ctcacgggta taacctgtct
    23341 tactcactaa tgcctgatag gattgggaac gaaccatact gttggtgttt ttcatagaga
    23401 aataacgacc acctgcataa acactcacta atggcgaatt agacaattgc tgaatttcag
    23461 gcttacttgc cgcatagcct gccaatttag caagatcaac caccgttgaa acattatccg
    23521 aagataagcc tgagctatca ccaaagtagg tttgagtcat accgatttca cgggctttgc
    23581 tgttcattcg agccaaaaat tgggctttat tcaaatgtgt tgcgtgggca agggcgtgag
    23641 cggcatagtt atcggagcga actagcatcg cttttaacaa ttcactacag gcaatgttaa
    23701 gatttttcgg caatgggctg gtcgtgcctt ttaagaaatc agcatctgac ggcaaaattt
    23761 gggtttggca actcgcccca tagcggtttt cttctaagaa aacgactgct gtcattaatt
    23821 ttgtgaccga agcaatcggg cgaactaaat tgaaattctt accttccaaa aatttctttt
    23881 ggtttaagtc aaacaccaca taagcggaat tttcggttgg aatataagca gcggttgctt
    23941 taatccgtgg tgtgcttttc ctttttgccg gctgggagga acaggcgctt aacaccagag
    24001 ccgcaatcat aacaggaata aattttttca tcataataga ttcatcgata ataaagtcaa
    24061 agctggttat tctaccctgt ttccaaaatt gtgccaaagc aagcggtcga tttttacaaa
    24121 atttttgcaa atctagccga ttttgcaaaa tttccgccaa atttaaccgc ttgccctctc
    24181 gcctcaaatc agcgaaaata acgcttaatt ttttggcgga ctttccgccc tttttatttt
    24241 aattggttga gaaaaatgtc atacccacaa gaagttaata aacgtcgcac ctttgcgatt
    24301 atttcccacc ccgatgcggg taaaaccacc attaccgaaa aagtattgct ctacggaaat
    24361 gcaatccaaa ctgccggctc ggtaaaaggc aaaggctcgg cacaacacgc taaatccgac
    24421 tggatggaga tggaaaaaca acgtggaatt tcgattacca cctccgtgat gcagttcccg
    24481 tacaatgatt gcttggtaaa cttactcgat acaccggggc acgaagactt ctcggaagat
    24541 acttatcgta ctttgactgc ggtagatagc tgcttaatgg ttatcgactc ggcaaaaggg
    24601 gttgaggaac gcaccattaa attaatggaa gtgacccgct tgcgtgatac gccaatccta
    24661 acctttatga acaagctaga ccgtgatatt cgtgacccga tggagctgtt agatgaagtg
    24721 gaaagcgtgc tgaaaatcaa atgtgcgccg atcacttggc cgattggttg cggaaaattg
    24781 tttaaagggg tatatcacct ttacaaggac gaaacctact tataccaaac cggacaaggt
    24841 cataccattc aagaagtacg agtggttaaa ggcttaaata atccggaact ggatcaagcc
    24901 gttggcgatg atttagccca gcagttgcgt gatgaattag agctggtaca aggcgcttcg
    24961 cacgaattcg atcacaccga atttatcaaa ggcgagctga caccggtttt ctttggcact
    25021 gcactgggta acttcggggt caatcatttc cttgacggtt taaccgaatg ggcaccggca
    25081 ccacaagccc gtcaatcgga cgaacgtgaa gtttcaccaa gcgaggaaaa attcagcggt
    25141 ttcgtattta aaattcaagc gaatatggat ccgaaacacc gagatcgagt tgcttttatg
    25201 cgtgtcgttt caggtaaata tgaaaaagga atgaagctta aacacgtccg tatcggcaaa
    25261 gatgtggtga tctccgatgc cttaaccttt atggcgggcg accgttcaca agccgaagaa
    25321 gcctacgccg gcgatattat cggcttgcac aatcacggca cgatccaaat tggtgatact
    25381 ttcacccaag gcgaaaattt caaattcacc ggtattccga acttcgcccc tgagctgttc
    25441 cgccgaatcc gcctgcgtga tccgctcaaa cagaaacaac tgctcaaagg cttggtacaa
    25501 ctttccgaag agggtgcggt gcaagtattc cgtccgttaa tcaacaacga tttgatcgtg
    25561 ggagcggttg gggtgctaca gtttgatgtg gtggtttcac ggctgaaaac cgaatacggt
    25621 gtagaggcaa tttatgaaac cgtaaacgtt gccacagccc gttgggtcga aggcaaagat
    25681 gccaaaaaat ttgaagagtt caaacgcaaa aacgaggcaa accttgccct agacggcgga
    25741 gacaacctca cctacattgc tccgacaatg gtgaacttaa acctcgccca agaacgttac
    25801 cctgacgtac agttctttaa aacgagagag cactaaaacc aataggggcg aaaaatcttt
    25861 cgcccctaca aataaagcac aagcggtcaa ttttttttcc gaattttaca atactaggca
    25921 ttctgttcct caaatagcct aaatattccc ctatcaacaa tccttatctt gagattattc
    25981 tgcctattaa ttaaccactc aaaaataccc tcgcagaaaa ctctactttt tttatggaaa
    26041 tatgctaaag ttcgccaata ttcatagccc tgattttttt atggagaaaa taaaatgaaa
    26101 aaatggttga ttccattaac tgtcgcagcg ttctgtgttt ctgcttgcga tgataagaac
    26161 agcactcaag caaccgcaga aaaaccgcaa gtagagaata ctcaatcgca aaaaaatgcg
    26221 gaaatattac cgcttgcaac cgtggttgcc ccatgggaaa tcaatagcct tgacccgaat
    26281 caatcaggcg taattttcca gcgtatgaac ttagcggaaa cattggtcga agccgatctt
    26341 aacgggaatt taattccggc attggccact gactggcgca gtaacgaaga gggaacaatc
    26401 tggcgtttta ccttgcgtga aggggtaaaa ttccataacg atcaagtact taccgcacaa
    26461 gcagtggtaa atagtttgaa tatcgcaaaa agcaaaccgg gtgtgttagc aaaagccttt
    26521 atcaaggaaa ttcgagcggt agataacaaa gtggaaattg agctaactaa agcttttgtg
    26581 ccgtttcctc cctttttaac acactacacc gccttaattt tggcacctga aagctataat
    26641 gaaaaaggcg aagtgaccca aattatcggt acaggtgcgt ttaaacccac aaaaattgaa
    26701 gctccgcaga aattggaagc ggtgcaattt gagggctatt ggggcaaaaa accgcaagtt
    26761 cagcaagcca attatttagc cagcagccgt agcgaaaccc gtatgttaat ggcacaaagc
    26821 gagccgtcat cactggtatt taatttagat accgccagtg tagcaaggct gaaagccgat
    26881 cctaacctgc aattagtcag cggatctatt gcccgtacta ttcagttgaa aatggacgtg
    26941 gcaaagccgt tttttaacga cttagcgatt cgccaagcct tatcgcaagc gattaatcgc
    27001 aaggcgattg ctgagcaggt cttaaaaatt gagaacggag ctgccgatca aattttaccg
    27061 aaagcctttg ccgactggcg tgttgatacc gcagaacaag tggtcgatat tgcaaaaatt
    27121 aaacaaaatc tgaccgcttc cggctatacc tttgatgaac aaggtcgctt aaccaaagac
    27181 ggcaaaccgt ttagctttac catgcgcacc ttctcagatc gtcctgaatt accggtgatt
    27241 gctactatct tacaagctca atggaaacaa attggcgtgg aagtgaatgt ttcggtgggt
    27301 aatttcagcg aaattccggc ggggcatcaa gacggcagtt tagaaatggc tctttatgcc
    27361 ttaaattatg gcaaaacctt agatccatat ggcgtaattg cctccgactt cgccaatggt
    27421 ggcagtgatt ggggggtaat gaattggcaa aatactgagg tagacaatgc agtcaaatcg
    27481 ctcgaaaccg agcgtgaccc gcaaaaagcg aaagcattaa agcaaacggt tagcaaaatt
    27541 atttacaatg atttgccaat cattccggtg gtttattacc aacaaaatgt ggtggcacat
    27601 aaagaagtaa aaaatgtgac gctagatcca tttgaaagac gcttcttttt ggagttatta
    27661 agtaagtagt ttaattcaaa atactcctcg ctttagaaaa gggaaggtag gatttttcag
    27721 tagtaatttg cgctcttagg tgaataaata gtgacagaat tatcgttttt tctcattttt
    27781 cacctatttt ctccgcttat ttcttctgcc aaatcttccc ttcccctctt tgctaaagag
    27841 ggggatcaga acgcataaaa tcatcttttt aataaatgaa ataatacaat gcacaaaatt
    27901 ctcttccgcc gtcttatcca aattctactg gtgatttggt cggttggcac actcacattt
    27961 atcctcaccc gccaactttc gggtgatatg gcataccgca ttgctgccag ccgctatggt
    28021 tatgatcaag cagatagtgc tgctgctgag gctgtgcgtg ccgagctggg attagaccaa
    28081 ccttggtggc aaagctactt cagctggcta agtgacttgg ctcaatttaa tttaggcaaa
    28141 tcattggtga ccggtgatcc ggtctggtct gaaattcagc accaattcgg gcatacctta
    28201 agccttgcga ttgtggcact tatcttagca atccttatcg ggcctccgct cggtttgtta
    28261 gccgcccgta agccaaacgg cttttttgac cgcttgacac tggtattcag taccctgttt
    28321 cgctccgtgc cggcatttat tattgcgatt ggcttgatta cgctgttttc cgctcaacta
    28381 aaatggctac ctgccggcgg atacggctgt tggcaacatt ttatcttgcc tgccttaacg
    28441 cttgcgattg gcttgagtac ggtttcggta cgagtcaccc gttctgcaat ggttcaggta
    28501 aaaggctcag aattttacca attttcacaa ttaaaaggct taagccgttg gcataccttt
    28561 ttacgtcacg gtttgccgaa tattgccgtg ccggtcattg cctaccacgc agtacaatta
    28621 gtttatttaa ttgaaggcgt tgtggtggtc gaaagcctat ttgcttggcc cggcagcgga
    28681 cacgcactgg ttcacgccat cattgcccgt gatgtgccga tgattcaagg tacaacgctc
    28741 gtgatgggcg gattgtttgt tgtattaaac accattgccg atctattaag tgcttggatt
    28801 gacccacgaa ttaagcgata ggacatcaag atgaaaattt caatttcaca atatttaggc
    28861 ggcactattc tccttgcaat gttgggattt gcctttttac agccttattt ttacccgatg
    28921 gatattggct ttcaagattt aaccaatatc ctttccaatc caaatgaaat cgcttggttc
    28981 ggcaccgatc atctcgggcg ggatatgctt gcccgtcttg cctctgctat tcgtctttcg
    29041 tttggcttat cactgtttag cgtgatttgt gccttaattg caggcttaat taccggcatt
    29101 atggcaggct ttttcggtgg ctggattgac cgcattttca gctttatttg tgatctagtg
    29161 atggcactcc ccggcttact tttagtattg ctctttgccg ccctttctcc cggctcattt
    29221 tggacgctct atttagggat ttcattggta atgtgggtgg aatttttccg tgtgatccgc
    29281 tctatcagtt caacaatggc aaacagctcg gaaattcaag cctcacgcct aatgggaatg
    29341 ggctggtttt atagcttcaa acgccactta ttgccccgtt tattaccgat gattgccact
    29401 ttatcggcat tctcgctcgg caatgcgatt ttagctctcg ccacacttgg ctttgtcagc
    29461 gtagggcttc gcccgcctac agcagaatta ggcttgatga tgaccgaact attcccttac
    29521 tactacgaag caccgctgat atttttgcaa ccagtggttg ccgttttctt aatggtactc
    29581 agcttacaat tattgtctag aaaaattaaa taatgcgtag gggcaggtcc tgtgcctgcc
    29641 caaaattctt attatattta tgggcgggca cagggcccgc ccctacagta ataaaatgaa
    29701 gatgaaatta ctcgatatcc aaaacctatc tgttgaaacc gaaaacagat tacagctggt
    29761 cgaaccgatt agcctacaat taaaggcagg aaaaaatatt actatcttag gcgaaaccgg
    29821 ctcaggcaaa agcctgctga ttcaagcgat tatgggggcg ttacccgacg gcttaatcgc
    29881 aagcggtgaa atttcggtaa aaaattgcaa aatttccacc gaatccgacc gcttgcaaac
    29941 attgtggggt aaaaccttgg taatgctgcc acaagagcct cgccgctcgc ttaatccgat
    30001 tatggcaatc ggcaagcagt tgtgggaaag ttttcactat gtggcaggca aaccatcatc
    30061 tcaagccaaa acggaaagca aagcctattt agccaaactt gggctgggcg aatcggttga
    30121 aaactaccca caccagcttt ccggtggaat ggctcaacgt gcctcttttg cgattgcaac
    30181 tgccgccggt ggcaaaattt tacttgccga tgagccgacc aaagggcttg acccaatcag
    30241 taaaggcaaa gtgattgaac tgttaaaatc cgcctaccaa aacggtggag gcttgctcac
    30301 cattactcac gatattgaag ttgccgagca actcggtggc actattttag tgatgaaaaa
    30361 aggcgaactg ttggagcaag gtgaggcaaa agcgttgtta aataacccac aacaccctta
    30421 caccaaagca cttatcagtg ccgatccaaa acattggcaa ccattgcaag atctgcaaaa
    30481 tttaagccaa aaacaaccgc ttgtttcggt taaaaatttg agtattgccc gtggtaagaa
    30541 aacgctgttt agcaaccttt cctttgactt acacaaaggc gaagtgcttg ggattgtcgg
    30601 gcatagtggg attggcaaaa gctcgcttgc cgatgtactt tgtggtttgc ttaagccgaa
    30661 atcgggcgag gttgtgtggc acagccacag ccataaaaaa caccaagtgt tgaagcttta
    30721 ccaagaccca ccggaagcct ttgctccgaa tgtcagtcta aaaaccttgc ttgatgatgt
    30781 gattaacaag caccaattag atcgactgcc gattccaagt ttactgcaac aactttcgct
    30841 caacccagaa attttgcaac gcaatgcgga aaatgtctcc ggcggcgagc tacaacgagt
    30901 agcaattttg cgagccttgc tcttagaacc ggtactactg tttgccgatg aagtcacttc
    30961 tcggcttgac ccaatcacac aacaagaaac gatagaattg ctgatcaacc agtgccgagc
    31021 gagaaattgc agtctgattt tggtcagtca cgatccttat ctaattgaga aatcgtgcga
    31081 taaagtgatt aatttggaag agtatgtggg ctaacaagcg gttcaatttc tgagattttt
    31141 tgcggctcta aaaacaaaaa tgcgaagaca tcagttcttc gcatttttct tacttattcc
    31201 ttattgccca gccagcttct gccgtacaat ttcaaacaga cagaccccgg ttgcaactga
    31261 gacattcaaa gaagatactg agcccgccat tggaatgctg ataagctggt cgcaatgctc
    31321 acgggtaagg cgacgcattc cgtcgccttc tgcccccata actaacgcaa tcgagccggt
    31381 taattttgct tcataaatgc ccgattccgc ctcacctgcc gtgccgacaa tccagacatt
    31441 atgccgttct tgtaaatctc gcattgtgcg agccagattg gtaactcgaa tcagtggcat
    31501 cacttccgct gccccacagg cgactttgcg agcggttggt gtaagctgag cagatttatc
    31561 tttcggcaca ataaccgcat caacccctgc cgcatcagcg gtacgcaaac aagcccctag
    31621 gttgtgaggg tcggtcacgc catctaaaat caacaagagt ggatttttct tttggcttaa
    31681 gatcgcctct aaatcgtgtt cattcagctc tttttgtggc acgactctgg caataatccc
    31741 ttgatgcact tcaccttgcg atttgttatc taaggtttgg cggttcactt gttgaattgc
    31801 cacccctaaa cgttgtaatt catttaatag tggcattaag cgtttatctt cacgcccttt
    31861 tagcaccagc acttcaatta aacgctcagg tgcattatcc aaaaaggctt tcactgcgtg
    31921 aatgccataa atttgttcgc tcatatttta tccttaataa ttgggcgaac ccatcagctc
    31981 gcccatataa atacctaact aaagcaacat cttcacaatt ttatccaact taaccctgcc
    32041 gaattttttc agcaatttac gcacattttc agggtaatcg gttaaaactt ccaaatcact
    32101 gtagtgagtt aaaatctgcg tatgttggca aatttggttt aactccgttt ctgctttttc
    32161 acttaattga tgttgaggat cggaaattaa aattgcattt tcggcatcta accgccacgc
    32221 tcttgggtta aggttattgc cggtcagcaa aatatagcgg ttatccaccc aaaccccttt
    32281 taagtggtag ctgttttcgc catctttcca taagcgaatg gttaactgtt tattttgtac
    32341 ataaccgtcc aaccgttttg caaaggctcg taagttcttt tcatacaaat aaggcagagc
    32401 cgatgccatc gtgaattttt cgtccggctt ggtgtagaaa tcattagcgg ttttatcccc
    32461 cacaataatt tcaaccgatt tgccgtttgc caatagccat tcaatacggg ttctcagaga
    32521 atgcggaaaa ttaaaatacg gagtgcaaat cgttaatttc tgctcagttt gataaaacaa
    32581 cgcttcaatc actttattta actgattctt acgtcgccct aagcctacta aaggagaaac
    32641 cgctaagcga ccattttcag caacaccgtt aaataaatac gcttcccgac ttaattgttt
    32701 gcggaaatgc ttaatttgcg cacgaatttc agccgttttc gggcgatttt ccgtatctaa
    32761 acgttttacc gcttcattgg ttaaaagatg ctgttgaata aacgtcaccc agctatcggc
    32821 aagaacttta ttttcaatga cgtggtaacg gtcataacgg taacgttcaa attgatgcaa
    32881 atacacatta ttaatgcttg ctccgctata caaaatcgta tcgtcaaata cgaagccttt
    32941 caaatgcaat acaccaaaca cttctcgtcc gttaatcgac acaccgtaaa aggcaatctc
    33001 ttgccctgcc ggtaaacctt gttcgtattt aacttttgca taccagtcgg cgttagataa
    33061 attctctgcc tcaccaatac gcccacgttg ggctcggtgc caatcaacca aaatgttaat
    33121 ttccagttca ggattatttc gcttcgcttg atataaagca gctaatactt cctgcccggc
    33181 ttcatctttt tcaaagtaaa gagcggttat ataaatacgc ttttttgccg tttgaatcag
    33241 ctgtaaaatt tgttgtttaa acgctttgct cgaggcgaga aactgaacct gctctgccac
    33301 ttgtggtaag tatggcaggc ttttcaatag gtattcagct ttacgttgtt tgttcaaaat
    33361 taacatcatt gattccaaaa ttttcaatcg ttgcctgcta ttttacactg aaatcgccaa
    33421 taaagcgatt ttcgcttaac ggcattgata gctggtcaaa cgattaggat cttctccggt
    33481 ttgataaatt gcgactttcg gataagcaca aagcgggatc tgcttggctt tattagggta
    33541 aagctcaccg gctttggcgg caatactttc cggctccagt cctttctcaa cccaattttc
    33601 aagggcagtg agcatatcaa aatcattcac cgttgcccct cgcccacaat ggttcattgc
    33661 cgacacgaaa aacaattttg caaaatgttg cggattttcg accgcttgtt gtaggctttg
    33721 ataccaattt ttgagatcaa ctgccgaaaa aatcgggtct gaaacgcctt gataaatcag
    33781 cattttgcca ccgttctgct taaaagcgga taaatcaact tgatctgtat cgtgaatgct
    33841 ccctaccgct ttcacttgtt cgctggcttg atccaaatct acgctgagtg gatcacggct
    33901 cggcactctg ggggctaaat agtaatgggt caaacttttc aatcccattt taaaactaat
    33961 gctgttgggc tgagcggttt ggctatcacc taatttccaa tcccgccagc ctttagcgtt
    34021 aatgccggaa tcatacgccc aagggctata aatcagctcg cctcgactgt ttttcgcccc
    34081 ctcgaaaatc gttttgatta aagcgacttt tttctgcccc agttgctttg ccaccatttc
    34141 cggctggaaa tcacactgtt cccacgcatt aattaaaccg tctgctaagc cgtctaactt
    34201 atcgcaacgt gttaatacgc cattggcaat cacatctaaa tcttgttgag tgagggcttg
    34261 ggataaaatt ttgtcgccat caccattctt cggagcaact gccaacaagg ctcgattatc
    34321 ccatacttcc gccaagactg aacgggaaac ccgaaagccg gggctgcctg caatcacacc
    34381 gtcaaattcc tgtggataac gcattgccgc catcatcgcc tcacgaccac cattcgagca
    34441 gcccataatg taattgtgct tgctcggttt tcggtaaaat tcggcaatca actgcttggc
    34501 aaccgtggtc actttgccga tagaggcata ggcataattt gagcgagctt cgggatctgc
    34561 ggtaaacact aaatctcgag tggcgtgacc actgtcgtta ctcactactg catagcctct
    34621 gtttaagcca tttgcaccac tcgccccgtg cggatagagc ttaccaatgg cagggaaaat
    34681 caccccacct acaccgcccg ccccctgaaa taagaatttt tcattccatt gttcgggtaa
    34741 acgtagctca aattgaatac cgtaaggaac attatccacc tccacccgtt ttccaatttc
    34801 accttgtact aaacagtaag ccggcaactc agcagatttc tcaacccatt cagctttata
    34861 aatagccgtt ttttccggcg agttagattt taacgcgaca cattgttcag ccatagaatt
    34921 agccaaagca gtgtgagaaa aaacggagag aaaaataaaa agaaaagcga ttattttcat
    34981 catttacatc aatacaagcg gttatttttc cgaaaatttt tgcaaatttt aaactgagtg
    35041 tctatctatc gctggaaaag ctaaggcaga gtttcctctg ccttagaaag atgaattgaa
    35101 ttacatttta agcaaacaag cgtttttcgc cttcgccggc tacgttttcc acacaacgtc
    35161 cgcaaacttc ttcgtggcca gagtgcgagc cgatgtcggt agcataatgc cagcaacgag
    35221 ggcatttctc accatctgca ttttccactt ttactgcgag tccggctaat tcgccttccg
    35281 caatatctgc ttccgccagt ggtttaacaa tcgcttgtga ggtaatcagc acaaagcgta
    35341 attcattgcc aagttgttct aataacgggc gaatttcatc attggcgaat accgtcacct
    35401 tggcttctaa gccagcacca attactttgt ctttacgggc ttgttccagc acacggttga
    35461 cttccgcacg cacttttaag atttgttgcc agtaagcatc atctaattta tcttgctcgg
    35521 ttaaaccgaa taatccggtg tagaattctt cggtaaagac aaattcactt ctgccttcca
    35581 cctgcggtaa gtagccccaa atttcatcgg ctgtgaagga taaaatcggt gcaatccaac
    35641 gtactaacgc ttctgcaata tgccataacg ctgtttggca gctacggcgg gcaaggctgt
    35701 cggctttggt ggtgtattgg cggtctttga taatatctaa gtagaaagac cccatttcaa
    35761 tcgagcagaa acgcattaaa cgctgtacta ccgtgtggaa ttggtagtta tcataggctt
    35821 ctttgatgtc gttttgagcc tctaaagcac aagccaccgc ccagcggtct aaggcgatca
    35881 tctcttgcgg ttgaactaaa tcactttttg gatcgaaacc gttcaagttc gccaataaga
    35941 aacgggctgt gttacgaata cggcggtatg attccccggc actgtttaaa atattgtgcg
    36001 aaacggtaat ctcaccggta tagtcggtgg aggcaaccca taagcgtaaa atatctgcac
    36061 cgtttttgtt ccacacttca cttggcacaa ttacgttgcc aagcgatttg gacatttttc
    36121 tgcctttctc atctacggta aaaccgtgag ttagcacttg tttgtatggt gctttgccgt
    36181 tagtagcagt ggaaagcatt aaagatgaca taaaccaacc acgatgttgg tctgaacctt
    36241 ctaaatacat atccgctgaa ttgccgttaa attcagggcg ttgttctaca acagaggcat
    36301 aggtcgatcc tgaatcaaac cacacgtcta aggtatccgg cactttgcgg taatctttgg
    36361 cttcttcacc gagcaattcc gcaggatcta aatcccacca cgcttgaatg cctttttctt
    36421 ctacacgttt cgccacttct tcaattaatt ctaaagtgcg aggatgtaat tcttcggttt
    36481 cattatgcac aaacatcgcc attggcacgc cccaagtacg ttggcgtgaa atacaccagt
    36541 ctgggcggtt tgccaccatc gtatcaatac gagcttcacc ccagcttggg atccaacgca
    36601 ccgatttgat ttctcctagt gcttgctggc gtaagccttg ggtttccatt ccgataaacc
    36661 attgtggggt agcacggaag ataatcgggg ttttgtgtct ccaacagtgc ggataactat
    36721 gcttgatgcg ggataatttt aataatgctc ccacttcttg taatttttcg actactttat
    36781 cgttggattc aaacacacct aagccggcaa agaacggggt gtctgctttg aatttaccgt
    36841 cattggaaat tagccctgcc atttcaatgt tatatttgcg agcgaccacg aagtcgtccg
    36901 caccgtgatc cggtgcagta tgcactaacc ctgtaccacc gtctgtggta acgtggtcgc
    36961 caaaaataaa tggcacgctg taatcataga atgggtggtt aaagcgtaat aattctaagt
    37021 tttcgccttt ggtggttgct aaaatctcag cagattcaac gcctgctgct tttgcaacat
    37081 cttcgactaa atcgaccgct agtaacacac gctcatcacc taattggact aaggcatagt
    37141 ctaattcagg gttgatcgca atcgcacggt tagacggaat agtccaaggg gtagttgtcc
    37201 aaataaccgc agataatgcc cctctacctt taccctgtgc gttgaatttt tcttctaccg
    37261 catttacgtc cacagcatta aaacgcacat aaatagaggg agaaacttta tcttcatatt
    37321 ccacttcagc ttccgctaac gaagatccac aatctaagca ccaatgtacc ggttttgaac
    37381 ctttgtataa atgcccgttc gcaatcactt tgccgagcgt gcgaataata ttcgcctcag
    37441 tgttaaaatt cattgttagg tatgggttat cccaatcacc taaaataccc atacggataa
    37501 aatcggcttt ctgaccttct acttgttctt tcgcatagtc acggcacgct tggcgaaact
    37561 cggcagccga aattttctca tttggtttac caacaatccc ttctactttc agctcaatcg
    37621 gcaaaccgtg acagtcccag cccggcacat aaggggtatc gaaacctaat gcggttttcg
    37681 atttcaaaat catatctttt aaaattttat tcactgcgtg acctaagtga atattaccgt
    37741 tagcatacgg aggaccatca tgcaaaataa aggttttctt gcctttcgag gcagtacgaa
    37801 ttttttggta taaatttttg tcataccaat tttttaacat atcgggttca cgtttcgcga
    37861 gatccccacg cataggaaag cctgtttcag gcaagtttaa ggtgtttttg tagtcaatag
    37921 tcattttttt atttctcgtt aaaattatct gttttatgcc tagcacggca tagccgtact
    37981 aggttaagca tagctcagcc cctctggggc tggaaactag aaaggctcac cttgcaaatt
    38041 ccttaaaaaa ttcaaccgct tgcaagcgat ctttctcaat ctgggctttt agtgcttcaa
    38101 agtcgggaaa ttttatttca ttgcgtaatt tttttaaaaa gatcacttca atcgcctcac
    38161 cgtaaataga ggcattgaaa tcaaaaatat gcacttctaa taacggctta gtaccgttaa
    38221 tggtcgggcg gttgccgaca ttggcgattc cgttaaaact gccctgtttg gtcttcactt
    38281 ttaccgcaaa taccccttga atcggcgtaa ccaaacgatt gagcataata tttgcggtag
    38341 gaaaaccaat ggttctgccg agtttattac cgtgtgcaac gcgtcccaga atcgaataag
    38401 gcttgccgag taatttctct gccaaatcta actcattgtt ttgtaaggct tctcgcacta
    38461 atgagctgct aattctttct tcgtttaagc tatgggtatg gctttcttcc accgcaaagc
    38521 gatattttaa gccggcattg cgtaaagttt caaaactgcc cgcccgtttt gccccaaagc
    38581 gaaaatcatc gcctacactt aaatagcgta ctttcagtct tttagcgagc aaatcgctga
    38641 tgaaatcgtc tgccgaaatt tgagcaaatt tttcactaaa acgcacgcat agcacaaaat
    38701 ccacaccggc ttcttccaaa tattttagct tatctcgcag gcgcattaag cgggcgggcg
    38761 ggttacaagc ggttgaattt ccactttttt ttgcaaaaaa ctctcgaggt tgtggctcaa
    38821 ataacatcac aactgagggc aatcctaaat ctaaagctct atcacaaaga cgagccaaaa
    38881 tattttgatg cccaagatgc acaccatcga aattcccgat agagagaaca cagccttgat
    38941 ttaaagcgat gtgtttgtct aagttgtgga aacctcgaat aagttgcata aaagataaac
    39001 cattttataa gtgaaaattg ctgtgattat aacgagaaat ctacaaaaaa ggaaaaaaat
    39061 tcaatctgtt atattttttt agtgctgaaa gtggtcgtgt agctaattat taa
//
LOCUS       DANLXO010000011        37286 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.011, whole genome shotgun sequence.
ACCESSION   DANLXO010000011 DANLXO010000000
VERSION     DANLXO010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 37286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37286
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.011"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(31..821)
                     /locus_tag="PXD69_000462"
                     /pseudo
     CDS             complement(31..821)
                     /locus_tag="PXD69_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            complement(818..1519)
                     /gene="lpxH"
                     /locus_tag="PXD69_000463"
     CDS             complement(818..1519)
                     /gene="lpxH"
                     /locus_tag="PXD69_000463"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDL6282699.1"
                     /translation="MTYYFIADLHLNENQPEITHLFLQFMQEKALLAEAVYILGDLFD
                     FWIGDDEQSELISTVKQAIKTLTTSGTKCYFICGNRDFLIGKRFSEQTGMVILPDYHV
                     IDLFGTSTLLCHGDTLCTDDVKYQQFRKKVHQKWRQAIFLMFPLSWRIRIAEKIRSKS
                     KQEKRDKSAEIMDVNAEVTAQIVAKYNTTQLIHGHTHRQAIHQHNGFTRIVLGDWKEN
                     YASILSVTEQGAEFI"
     gene            complement(1594..2115)
                     /locus_tag="PXD69_000464"
     CDS             complement(1594..2115)
                     /locus_tag="PXD69_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1523 family protein"
                     /protein_id="HDL6282700.1"
                     /translation="MRAILKYFLILVSLSFFIVLGGAVNYAMPSYEDTVVTGMEVRRM
                     DKDGIISKANPADGEVRDVYFLFTEDPETKKVMVYRNEDTGWGLPPYFKFGSADIQAK
                     AQAYANEKQRVQIKYYGWRINWLNEFRNIVSIKPLEEAETVSKPIMSYVLYAVLAFLF
                     FLSVQFIRGIFKD"
     gene            complement(2125..2913)
                     /locus_tag="PXD69_000465"
     CDS             complement(2125..2913)
                     /locus_tag="PXD69_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchF/TatD family DNA exonuclease"
                     /protein_id="HDL6282701.1"
                     /translation="MKDLFIIDSHCHLDSLDYETRHKNVDEVIENAKARGVHHFISVC
                     TTVGRFEAMKNLTAHRNDVSLSCGVHPLNVEDEPFDYDKLFQFAQDPKVVAIGETGLD
                     YHYTPETKALQQSLFVQQIEIANKLNKPLIIHSRSARQDTMDMLEQNNAEKCGGVLHC
                     FTEDWAMAKRALDIGFYISISGIITFRNAEELREVVRKVPLDRLLVETDSPYLAPIPY
                     RGKPNQPAYVRETCEYVATLKGVSTEELARITTENVQHLFNIKL"
     gene            complement(2918..3202)
                     /locus_tag="PXD69_000466"
     CDS             complement(2918..3202)
                     /locus_tag="PXD69_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6282702.1"
                     /translation="MYKLSAQALRDQEKLFRYSISQFGVQQTESYFADLKHILNLLAD
                     FPTMGTSAEYIRGGLRMHTHQSHTIYYRIKADHIFIVRILHNQMNHKRYI"
     gene            complement(3195..3437)
                     /locus_tag="PXD69_000467"
     CDS             complement(3195..3437)
                     /locus_tag="PXD69_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL6282703.1"
                     /translation="MARTTSVTLGEPLNDFVNEMVASGRYGSTSEVVRTALRMLEEKE
                     QYLAQLRQAIDDGDASGYATETIDEMMLRVKAELNV"
     gene            complement(3568..4545)
                     /locus_tag="PXD69_000468"
     CDS             complement(3568..4545)
                     /locus_tag="PXD69_000468"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDL6282704.1"
                     /translation="MYPWLESTYQQLTDSFLQGRGHHALLFKTDVGLGTDTLIYKVAE
                     WLLCSQKLRHQPCLECKSCLLMQSNNHPDFHILEPIEDKDIGIDQVRELIYKLQNFAQ
                     QGGNTVVYIRGVDRLTEASSNALLKTLEEPRENVYFLLEAPLQATVLATIQSRSQTWV
                     LYAPQASEVMAWLQTQFPAISTDDLEIALRLCHSRPLICKNFIENDRLQQRKTFLQTF
                     WRFYKSHDVFLLFQAFAQEKELILQQLEWLESFFSDALKAKMAISHGWLNPDLQNGIL
                     PFSQQLTTHGLLKGHQILQQTQRDLTEINAVNPELMLLDCLTKLVLVFE"
     gene            complement(4545..5165)
                     /locus_tag="PXD69_000469"
     CDS             complement(4545..5165)
                     /locus_tag="PXD69_000469"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDL6282705.1"
                     /translation="MRGKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGT
                     PLAEKLRHLIKHETEEAINDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSS
                     QAYQGGGRKLDRHLLETLKESVLGTFEPDLTIYLDLDPVIGLERARGRGELDRIEQQS
                     LDFFYRTRERYLELTQHNDKAVIINAEQPIEQVTADIQQVIRNWLK"
     gene            complement(5176..6210)
                     /gene="mltG"
                     /locus_tag="PXD69_000470"
     CDS             complement(5176..6210)
                     /gene="mltG"
                     /locus_tag="PXD69_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDL6282706.1"
                     /translation="MLKKILIALGLAGVIACGGLFYGYQKLTSLAEHPITVQPNQLFV
                     LEKGVSSQKLAALLEEQGIVTHDDADLIPYLMRLYPELSKFKAGAYSLAGLTTVKDLL
                     AHLSSGKEVQLNVQFIEGKTFKIWREQLAKADYLQHTLQGKSEKEIADLLGIPHEKIE
                     GWIAPDTYNYTPNSTDLALLKRAYQKQKTALEQAWKNRAENLPLATPYEMLILASIVE
                     KETGIATERPQVASVFINRLRNNMRLQTDPTVIYGMGDRYNGNIRRKDLEEATPYNTY
                     QIDGLPPTPIAMPSEASIKAVANPDNTPYLYFVADGTGGHKFSKTLNEHNKAVAEWIQ
                     IERKRKNEQK"
     gene            complement(6303..6378)
                     /locus_tag="PXD69_000471"
     tRNA            complement(6303..6378)
                     /locus_tag="PXD69_000471"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6343..6345),aa:Lys,seq:ttt)
     gene            complement(6400..6475)
                     /locus_tag="PXD69_000472"
     tRNA            complement(6400..6475)
                     /locus_tag="PXD69_000472"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6440..6442),aa:Lys,seq:ttt)
     gene            complement(6498..6573)
                     /locus_tag="PXD69_000473"
     tRNA            complement(6498..6573)
                     /locus_tag="PXD69_000473"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6538..6540),aa:Lys,seq:ttt)
     gene            6790..7317
                     /gene="ppa"
                     /locus_tag="PXD69_000474"
     CDS             6790..7317
                     /gene="ppa"
                     /locus_tag="PXD69_000474"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDL6282707.1"
                     /translation="MGLELVPAGKELPDDIYVVIEIPANSDPIKYEVDKETGALFVDR
                     FMATAMFYPANYGYVNNTLSSDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGG
                     DAKVVAVPHTKLSKEYDHIKDVGDLPALLKAQIQHFFESYKALEAGKWVKVEGWGDVN
                     EARQEILESFERAKK"
     gene            7373..8128
                     /locus_tag="PXD69_000475"
     CDS             7373..8128
                     /locus_tag="PXD69_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDL6282708.1"
                     /translation="MKFIKKLSYSVFLATVITACATTESINQEAAQSYAQVKTQARQQ
                     NAIDNSSATAKRIHTVFHKMKPYAERANQTGVPFHWEITVLKSDELNAWAMPGGKMAF
                     YTGLVERLNLSNDEIAVVMGHEMAHALKEHGKSDRTVSAITSIVGAIADVAVTASTGV
                     STEGLLSTGVDLIATKPFSRSQETEADEVGLILMAESGYNPSAAPNVWVKMSKANGDS
                     GLSIFSTHPSNADRQENLARLVPEAMKIYNARK"
     gene            complement(8192..9223)
                     /gene="trpS"
                     /locus_tag="PXD69_000476"
     CDS             complement(8192..9223)
                     /gene="trpS"
                     /locus_tag="PXD69_000476"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDL6282709.1"
                     /translation="MSKPIVFSGVQPSGELTIGNYLGALRNWVKMQDDYDCVYCIVDQ
                     HAITVRQDPESLRKSTLDVLALYLACGIDPNKSTIFIQSHVPEHAQLAWVLNCYTYFG
                     EMGRMTQFKDKSARYEENVNVGLFTYPVLMAADILLYQANQVPVGDDQKQHLEITRDI
                     ANRFNALYGKKDSEGNLIEPVFAVPEVFIAKSGARVMSLLEPTKKMSKSDDNRNNVIG
                     LLEDPKAVAKKIKRAMTDGDEPPVVRYDVQNKAGVSNLLDILSAITGKTIAELETEFE
                     GKMYGHLKTEVADKVSELLTNLQERYHHYRQDEALLEKIYREGAEKARAQAKATLDKV
                     YELVGFVRY"
     gene            complement(9350..9682)
                     /locus_tag="PXD69_000477"
     CDS             complement(9350..9682)
                     /locus_tag="PXD69_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDL6282710.1"
                     /translation="MKRGDIYWLDLDPTLGHEQSGFRPVVIVSATAFNLASKLPVVVP
                     ITNGGAFAERLGFAVSLKDAGLKTTGIIRCDQPRTVDIAQRHGKFIEALPESLLDEIM
                     ARVSVIFE"
     gene            complement(9679..9939)
                     /locus_tag="PXD69_000478"
     CDS             complement(9679..9939)
                     /locus_tag="PXD69_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL6282711.1"
                     /translation="MPTIALRQVGGSVAMVIPPAFLEALKLSVGSKVDLSLNDNQLVI
                     NPARPKVKYSLEELLRQSDFEAARNEESQSWLSEPAIGKEIL"
     gene            complement(10009..10677)
                     /locus_tag="PXD69_000479"
     CDS             complement(10009..10677)
                     /locus_tag="PXD69_000479"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDL6282712.1"
                     /translation="MSKKYKVIGFDLDGTLINTLPDLTLVANSMFLEAGLPTVTQEKV
                     LTWIGKGADIFFQNAVAHTGRIFQADELVKMRVSFDKYYATYVCEESTLFPNVKETLE
                     ILKANDYPLVVITNKPTKLVEPVLSAFGIYHLFDETLGGQSLPKIKPHPDPMFFICEK
                     FGITPSELLFVGDSENDVIAAKAAGCDVVGLTYGYNYNVPIEQSNPTFVTSEFKDVLK
                     IVGL"
     gene            complement(10764..11561)
                     /gene="lgt"
                     /locus_tag="PXD69_000480"
     CDS             complement(10764..11561)
                     /gene="lgt"
                     /locus_tag="PXD69_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDL6282713.1"
                     /translation="MNEQFIQFPQISPIVFEIGPIALRWYGLMYLAGFAFAYWLGMRR
                     AKNSNGVWTTEQVDSLVYTCFWGVVLGGRIGDVFFYSFDRFLQDPLYLFRIWEGGMSF
                     HGGLIGVIVAMIWVSYRQKRNFWQTADFIAPLVPFGLGMGRIGNFINDELWGRVTDVP
                     WAVLFPSGGYLPRHPSQLYEAFLEGVVLLFILNWFIQKPRPAGAVSGLFLIGYGTFRF
                     IVEYFREIDHNVNTTADLITRGQLLSLPMIIGGILIMAWAYKVNKVK"
     gene            complement(11569..12357)
                     /locus_tag="PXD69_000481"
     CDS             complement(11569..12357)
                     /locus_tag="PXD69_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL6282714.1"
                     /translation="MTILLSCLFLGVFVGFLAGLFGIGGGLIIVPSLVFLLPMAGVPP
                     EYIMSTALGTSFSTIIITAFASAQRHHKLGNVDIQTSKYFIPALMVSVFLSGLVVSRL
                     DPQLMSRIFAVMVLYLAGKMIFSIKRAPKNKPLTVQTTIIGGSIIGALASMAGIAGGA
                     FIVPFLNDRGLEMKRAIGTSSFCGAFLGLSGTISFIVSGWGLEGMPDYSLGYVYLPAL
                     FGITATSFFTSKMGASAANALPVPMLKKAFAVLLVCIAINMFLK"
     gene            complement(12359..13003)
                     /gene="rppH"
                     /locus_tag="PXD69_000482"
     CDS             complement(12359..13003)
                     /gene="rppH"
                     /locus_tag="PXD69_000482"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDL6282715.1"
                     /translation="MIDFDGYRPNVGIVICNKHGQVLWAKRFGQNSWQFPQGGINEGE
                     NIEAAMYRELYEEVGLSKKDVRLLWASKYWLKYKLPKRLVRNEGSGPVCIGQKQRWFL
                     LQLIGDESLINLKTTKNPEFDGWRWVSFWYPVRQVVSFKRDVYRKAMKEFAQVLQNNI
                     QKATDDKTGEKPRIERGETSPHTYKKTSQDSAKAYKREARKPYRPWHQHNQKGK"
     gene            13615..14760
                     /gene="lldD"
                     /locus_tag="PXD69_000483"
     CDS             13615..14760
                     /gene="lldD"
                     /locus_tag="PXD69_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent L-lactate dehydrogenase LldD"
                     /protein_id="HDL6282716.1"
                     /translation="MIISSANDYRRAAKRRVPPFMFHYADGGSYAEQTLRRNVSDLED
                     IALRQRVLKDMSQLDTGIELFGEKLSMPVTLAPVGALGMYARRGEVQAAKAADNKGIP
                     FTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPT
                     PGARYRDMHSGMSGPYKDIRRVLQAMVHPFWAWDVGIHGKPHTLGNVSNYMGKPIDLN
                     NYIGWLTDNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIIVSNHG
                     GRQLDGVLSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMLALGADCTMIGRSFVY
                     ALSAAGQAGVENLLDIFLKEMKVAMTLTSNAKISDIGRDALVDLSNL"
     gene            complement(14814..15083)
                     /locus_tag="PXD69_000484"
     CDS             complement(14814..15083)
                     /locus_tag="PXD69_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282717.1"
                     /translation="MLSEERFGFFYIFIFIYFSLLSLSIGYIRPELRTTYDYLEIENK
                     RYYVLSIHRNNIYVLGEKTKDNDEFLFFNQDTLKYYRINITKMPN"
     gene            complement(15158..15544)
                     /locus_tag="PXD69_000485"
     CDS             complement(15158..15544)
                     /locus_tag="PXD69_000485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282718.1"
                     /translation="MTNQKFINSSLTLAFFTLISFSTAYCYAWGIAAFHGYPWWHVEV
                     GNAGIARALAYVFGTFLTIFLFYLIGYALVNKVFKLHYFKYLGWLRVSVLVTIFSLPV
                     MISFYLFIGKVPMYLHLLYLGTTTSI"
     gene            complement(15797..16627)
                     /gene="fghA"
                     /locus_tag="PXD69_000486"
     CDS             complement(15797..16627)
                     /gene="fghA"
                     /locus_tag="PXD69_000486"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDL6282719.1"
                     /translation="MQQFENYRCFSGEQQVWQHFSASLNCEMKFAIYLPQSAKTQKLP
                     VLYWLSGLTCTEQNFITKSGFQRYADEHHLIVVAPDTSPRGVNVANDEAYDLGQGAGF
                     YLNATQGEWTTHYQMYDYIVSELPTLINAHFPTNGKQSIFGHSMGGHGALTIAFKNPG
                     QYQSVSAFAPIVAPTQVPWGQKAFLAYLGEDQTAWKAYDSVALLEKYRPSLPILIDQG
                     SQDSFLSDQLKPEIFCETADRLGIPYQFNLRDGYDHSYYFISSFIGEHIAFHAKHLKD
                     "
     gene            complement(16707..17765)
                     /locus_tag="PXD69_000487"
     CDS             complement(16707..17765)
                     /locus_tag="PXD69_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDL6282720.1"
                     /translation="MAYPIKSYATFSATTPLAPHSFERRELLEDDVLIDILYCGVCHS
                     DLHMARNDWGWTQSYPLVPGHEIIGRIIKVGKNAKKFQIGDLVGVGCMVDSCRECSPC
                     QHGLEQYCEVGNIGTYGGIDRFDGTPTQGGYSTCVVVSEDFVLKVSENLDTKAVAPLL
                     CAGITTYSPLRHWNVKAGSKVAVVGLGGLGHMAVKLAKAMGAEVTLFTRSLGKADDAY
                     RLGASRVVLSTDEKQMADVANTFDLIIDTVPYTHDLKPYIPTLALDGTLVLVGLVGEL
                     EQTINTVPMILGRRSISASVIGGIQETQEMLDFCAEHNIVPDVEMIDMQNINDAYERM
                     LKSDVKYRFVIDMGSLKG"
     gene            complement(17952..18887)
                     /locus_tag="PXD69_000488"
     CDS             complement(17952..18887)
                     /locus_tag="PXD69_000488"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03571 family LLM class oxidoreductase"
                     /protein_id="HDL6282721.1"
                     /translation="MNTLSPIFSQVFGQNQLTLGLIAPFMGYQNHIPDNLTTIADNAR
                     LAENLGFSALWVRDVPFYDPHFGDVGQGLDPMVTLGFLSAHTQNIALGTAGLIAPLRS
                     PIHIAKMATSVDSLSHGRFLLGLSSGDRPVEYPAFGADFASRSERFRESIDLINTLTE
                     QDFPHFKGKHYADLTDNLDLLPKPKHRLPIVAIGRARQEMDWLANVPDAWIWHGVNPA
                     DTANIINTLADLRQKDTPTAFGYAQFVEVLDDKNAKAQLFNNIYLRGGAKGLADFWAK
                     EQEKGVKHLALNLKPTQRPADEVLTELAEYALTQF"
     gene            complement(19167..19478)
                     /locus_tag="PXD69_000489"
     CDS             complement(19167..19478)
                     /locus_tag="PXD69_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6282722.1"
                     /translation="MSETEKQAINAPNAVMNGYLTMHYPDWFKPDGIYFNDGAFESFE
                     SSHKLTKDGKIRLVPTAGHTLGHLAVVVDMGEHYILIGGDASYSEQDMLAGNIDGVCN
                     A"
     gene            complement(19485..19877)
                     /locus_tag="PXD69_000490"
     CDS             complement(19485..19877)
                     /locus_tag="PXD69_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6282723.1"
                     /translation="MIKVHCLTTGWVQIKIHHQVARFFARPARVLDVLTDKKWSPKLP
                     IGCWLIEHDDGLILVDTGESSRANDKGYQPWWHPFMQFCERRGVKKHEEVGEILKANG
                     FDPLRIDTVVMTHMHGDHAGGLPNFPNS"
     gene            20009..20569
                     /locus_tag="PXD69_000491"
     CDS             20009..20569
                     /locus_tag="PXD69_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDL6282724.1"
                     /translation="MNDLRVIKTHLAIQNALIELLDEKLFEKVQVQEIIEKALINRTT
                     FYRYYSGESDLVGKLIKEVKAEYQDLLKKRFESGNLLRFMQTIGNRLLEKRRLILALW
                     QIKTPRHHLYDDMHMLLKNAFIAHAKRITSDDKNWAEKNWDYQAHIFATIALESHKYY
                     FEQGKLLPIPQVFEEWIEMVQVLKSV"
     gene            complement(20635..21624)
                     /locus_tag="PXD69_000492"
     CDS             complement(20635..21624)
                     /locus_tag="PXD69_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HDL6282725.1"
                     /translation="MSKQIQFTKTGSPDVLQIVDVAIPAPKAHEVQIQIQAIGLNRAE
                     MMYREGAYVIDPVFPATLGYEGAGVIVAIGEGVNEVAISDKVSIIPSFMFTEYGTYGE
                     IVNMPKHAVVKHPDNLSMEQASASWMAFVTAYGGLIEFGKVQKGDFVVLGGATSSVGL
                     ASIQIAKMQGATVIALSRTHAKGDVLLEKGADFVIATSEDDVTAKLFEITNGKGVNVV
                     FDPVGRKEAAKIINAMAQDGRYIIYGALSHDDIAVPVFPILGKHLTVRGYELFEITTV
                     PEKLAQAKTFVYDGLASGQLRPEIDKIFAFDEMVKAHEYMASNQQIGKIVVKV"
     gene            complement(21838..22755)
                     /locus_tag="PXD69_000493"
     CDS             complement(21838..22755)
                     /locus_tag="PXD69_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6282726.1"
                     /translation="MTFIIGILAGVLIAFQSAINARLRMHVGAAFLTSFVSFSVGLLF
                     LLGLSLIMQQTPAFSLDNLGNVPLWAWTGGLLGMVGLTANVLIFPKLGGVQTAVMPIL
                     GQVLMGVLIDTFAWLNSPYIAFTASRLFGIGLVLFGVWIAVVLPHLSGLKRKENANLW
                     LWRAVGILGGTALATQAAVNGEFGRQPGSSLGAATVSFGVGAIGLLLVVLFYEKSLPK
                     LCQPTEGKPFWIWSGGILGSLFILAGVWLVPQIGTGSVVMLVLSGLICGSLLVDKFGL
                     FGITQKPILPLQIIGVTLLLAGVAFIRLL"
     gene            complement(22891..23550)
                     /locus_tag="PXD69_000494"
     CDS             complement(22891..23550)
                     /locus_tag="PXD69_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003672168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6282727.1"
                     /translation="MQFFNKEDVINAFHYRASTRSYDGSRKIPAEDFNYILELGRLSP
                     SSVGSEPWQFLVLQNPELRQKIKPYCWGIPTMETSSHIVVILAKKNARYDSQYFSEIM
                     DRRGLQGEAREKAMAVYKKFQEKDIGILDSERSLFDWASKQTYIALGNMMTGAALIGV
                     DSCPIEGFAYQEVNDILAAEGLFDPSEWGVSVMCTFGYRDKEIRQKARKDFETVVKFI
                     E"
     gene            complement(23735..24799)
                     /locus_tag="PXD69_000495"
     CDS             complement(23735..24799)
                     /locus_tag="PXD69_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HDL6282728.1"
                     /translation="MAKFRKLFTPFNIKNLALKNRVVMPPMCQYSATNGVPNDWHFVH
                     YTSRAVGGVGLIIVEMTNVAPNGRITPNCLGLWNDEQQQAFKKLVDSVHAQGAKIGVQ
                     IAHAGRKAQDEPDAVAPSAIHYGELDYAGQNLITPRELTTDEVKALVQAFKDSVKRAV
                     EAGFDTIEIHGAHGYLIHQFYSPKSNQRSDEYGQDKMLFGEQVIQAAREVMPSEMPLI
                     VRISAQEYGENGFGLDYGLQVAKRFADAGADVLDISGGGDGVLHAGNHPEFYAGYQVD
                     FARQVKLATGKPVIAVGMLDNPAVGDHILGMGDADLVAVGRALLRDPYWVLNAQYDQN
                     AADSSEMQFVPKQYERGLFM"
     gene            24890..25798
                     /locus_tag="PXD69_000496"
     CDS             24890..25798
                     /locus_tag="PXD69_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6282729.1"
                     /translation="MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNR
                     LRESFNDPLFVRVQHGMQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIA
                     AMDYVQQIIALPLILRLRRLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTD
                     TLKTVLYEERYVCAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIG
                     LQRKVMVSVNHISLLPQLLQGSDLVAVLPERLAKTLPNVYLQPPPIEVEGFTMMMAWH
                     ERTEQDTAHRWLREVLQGVVKPKQAL"
     gene            complement(25868..26419)
                     /locus_tag="PXD69_000497"
     CDS             complement(25868..26419)
                     /locus_tag="PXD69_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6282730.1"
                     /translation="MAKQIAVLIGSGSKTSFSHLTVRHLQKMAPASIQLNIVDIADLP
                     LYDRDLDENSPAQYTRVREAVAVADGVLLVTPEHNASFSAMLKNAIDVVSRPMGQSKW
                     IGKPAGIVTVGASPAGGVRAADQVRTITSGSFVNMPTLPFALNVGNLFTGVFDEQGEI
                     ASETLKSSMQNFINAYAQFVEKY"
     gene            26611..27972
                     /locus_tag="PXD69_000498"
     CDS             26611..27972
                     /locus_tag="PXD69_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDL6282731.1"
                     /translation="MLFLNKIKQLFIFAFTLVLSACSLVVYKPVETIKQVNVERGYRQ
                     KNVIAESAKDGNIVVIMFSGGGTRAAALGYGVLEEFKKVRVKETNKGNTLLENIDIAF
                     GVSGGSILATYFALEGKDIIPKFADRFLKANFQKDIITEVFSLSNLPRLSSPQYGRGD
                     LLQERLNFALYHGKKFGDLVKNRKGPFAVISATDMNIGQKLTFTQETFDGLCLNLNDL
                     EISRAVAASSSVPLIFAPLTLNNNGGNCHFSMPQEFSAREKAIDGLITKNIEETNHIL
                     SLYQDSKERPFIHLVDGGLTDNLGLASVLEISDVMGIEEMYQYIHQLRVKNIVVINVN
                     AQNEVSSEIDKTANVPGVADVVNTIVNVPIDRTTQINLQRYRQFTDGWNEYANKQPSK
                     IEMHFVSLGLKELPDGDLKKDVLNIATSFYLPEEDVDKLREAARVLLQQSQEYNAALK
                     TLQ"
     gene            complement(28020..28517)
                     /gene="rraA"
                     /locus_tag="PXD69_000499"
     CDS             complement(28020..28517)
                     /gene="rraA"
                     /locus_tag="PXD69_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HDL6282732.1"
                     /translation="MRIDTSALCDLYSDQVDVVEPIFSSFGGASSFFGKITTVKCFES
                     NGLIAEVLEEEGEGRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDIL
                     ERLDIGIHALAPIPVGADNTDIGEVDTPVNFGGVTFFPEDYVYADLTGIILSQELLDL
                     NDISE"
     gene            complement(28615..29517)
                     /locus_tag="PXD69_000500"
     CDS             complement(28615..29517)
                     /locus_tag="PXD69_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDL6282733.1"
                     /translation="MTEKVTETAPNIDVVAETEKVIHKVSNMNIETMLNEWIIPYGTK
                     ILLAIAIFVVGKFLARLISRLLGKAALKSTKDEMLQSFIVSISYFLLLLIVVIASLSQ
                     IGINTSSLVALIGAAGLAIGLSLQNSLQNFAAGVMLLIFKPFRKGDLIETGGMTGVVE
                     QMGLLVLELRTGDNKTVLLPNGKVFSDSIINYSNNPTRRIDFTFDISYESNLKEAKEI
                     IQRILDANTYVLKDPAPVVAVGALAPHSVQLVVRPWVQTPNYWAAYWEIIEQVKLAFG
                     EAGISIPYNQMELHIKSGSLENKA"
     gene            29626..30588
                     /gene="rluC"
                     /locus_tag="PXD69_000501"
     CDS             29626..30588
                     /gene="rluC"
                     /locus_tag="PXD69_000501"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HDL6282734.1"
                     /translation="MTTEKVISAGVQFFTISEDEAGQRLDNFLLAKLKGVPKSLIYRI
                     VRKGEVRVNKGRNKPEYKLQPDDLVRVPPVRVAEKNEAPISTKLNKVAELESQILYED
                     ESMLVINKPSGIAVHGGSGLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKR
                     SALRSLHEQLREKVVQKDYLALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKP
                     SETRFSIEERYANATLVKASPITGRTHQIRVHTQYAGHPIALDDKYGDAEFDSKMKEV
                     GLQRLFLHAHAIRFEHPKTGEEMVITAPLDKTLKGVLAKLRANY"
     gene            30697..31555
                     /gene="folP"
                     /locus_tag="PXD69_000502"
                     /pseudo
     CDS             30697..31555
                     /gene="folP"
                     /locus_tag="PXD69_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248541.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
     gene            31555..31902
                     /locus_tag="PXD69_000503"
     CDS             31555..31902
                     /locus_tag="PXD69_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HDL6282735.1"
                     /translation="MTTLVYGIKNCDTVKKALKWLEDHNQNPQLHDYRVDGLNADWLV
                     EMEAKFGWENLVNKRSTTWRNLDEEIKNNLNRESALKVLTEQPTLIKRPIVIKEDIAL
                     IGFNEKEYVAAFN"
     gene            32032..33180
                     /gene="dapE"
                     /locus_tag="PXD69_000504"
     CDS             32032..33180
                     /gene="dapE"
                     /locus_tag="PXD69_000504"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDL6282736.1"
                     /translation="MKNEIISLAQNLIRRDSISPQDKGCQQEIAQRLEKLGFNIEWLP
                     FGDTLNLWATHGSENGKTEPCIVFAGHTDVVPVGDESQWAYPPFSAEIVDGMLYGRGA
                     ADMKGSLSALVVAAETFVQHHPNHKGKVALLITSDEEAAAKDGTVKVVETLMARNEAV
                     HYAVVGEPSSSKVFGDVIKNGRRGSITADLYIEGIQGHVAYPHLAENPVHTSLGFLTE
                     LTTYQWDNGNEFFPPTSLQIANIKAGTGSNNVIPGELYVQFNLRYCTEVTDEIIKAKV
                     AEMLEKHGLKYRISWNLSGKPFLAGNGKLVEAALQAVENVTKITPRLDTGGGTSDGRF
                     IALMGAEVVEFGPLNATIHKVNECVSADDLAHCGEIYYQILEKLLATA"
     gene            33291..34625
                     /locus_tag="PXD69_000505"
     CDS             33291..34625
                     /locus_tag="PXD69_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDL6282737.1"
                     /translation="MQLYSYICLLFGLAMFISFFTRKLNENIQTTIAITASALVGSLL
                     ILTFGSLGWFNVDKLAISIFEQLDFKSFLLNGMLGFLLFAGSLGIKLPLMKEQRREIA
                     VYALFSTLVSTFLIGALIYGVARLLGLELGFVYCLLFGSLISPTDPIAVLAIIKSLKA
                     PKRLSMHVEGESLFNDGIGLVIFTTIFAVAFGGQEPNLSGITGLFLQEAVGGIVFGLL
                     TGFVAHKFISATDDGSLEILITLTIPTVGFVIANYLHVSGALTMVVAGIMIGNWTRRS
                     GFSEQSQKYLDHFWEMIDHSLNYLLFLLIGLSTLLVDFTFIGGVLMLAAIPICLLARY
                     ISLWIPYQVLKRFRTYNPYTLKIMTWGGLRGGLALAMALSVPAGAAVVSSSEGNLDVR
                     DLILLMTYAVVTFSILVQGSTVEPMIKKSKLVDPRKVALNKLGAPDDVIPHI"
     gene            34732..35241
                     /locus_tag="PXD69_000506"
     CDS             34732..35241
                     /locus_tag="PXD69_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDL6282738.1"
                     /translation="MLFTGLLCGFLLGFVMQRGRFCITGAFRDLYVTKNSRMFVALLI
                     AITVQSIGIWLLYEAGSFSSPAEDLPLLAVIIGAFLFGIGIIYAGGCATGTWYRAGEG
                     LIGSWVALVIYGLFSASMRTGVLAPLNQELKSNVIQHRTIYETFGISPWVLVFILSVI
                     TLALSAHSI"
     gene            35270..35491
                     /locus_tag="PXD69_000507"
     CDS             35270..35491
                     /locus_tag="PXD69_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL6282739.1"
                     /translation="MNVRLPASGLVCPFPLVEAKAAMAKLNKGDSLTIEFDCTQATEA
                     IPNWAEEEGYEVTDYQQLGDALWEITVVK"
     gene            complement(35556..37064)
                     /locus_tag="PXD69_000508"
     CDS             complement(35556..37064)
                     /locus_tag="PXD69_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDL6282740.1"
                     /translation="MSKCPVTHLTMNNGAPVVDNQNSLTAGPRGPLLAQDLWLNEKLA
                     NFVREVIPERRMHAKGSGAFGTFTVTNDITKYTRAAIFSQVGKKTEMFARFTTVAGER
                     GAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRS
                     ATNNWDFWTLLPEAFHQVTIVMSERGIPASYRHMHGYGSHTYSFINAANERFWVKFHF
                     HTQQGIKNLTNEEAAAIIANDRESHQRDLYEAIERGDFPKWKMFVQIMPETDADKVPY
                     HPFDLTKVWPKSDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGISVSPDRMLQ
                     ARLFNYADAQRYRLGVNHHQIPVNAPRCPVHSNARDGQGRVDGNYGSTIHYEPNSFGK
                     WQEQAQYAEPPLKINGDAAHWNYREDDADYFSQPRVLFNMMNDEQKQALFNNTAAGMG
                     DALDFIKYRHIRNCYACDPAYGEGVAKALGMTVEDAIAARATDPALGQPGLL"
BASE COUNT        10579 a         7786 c         8093 g        10828 t
ORIGIN      
        1 tttttttagg gaaaatctgc aaatgctttt ttagctccat tcaagcgtat aaggcttaat
       61 accaatccct ttactattaa gacagtcttg tagatttcta atattattaa caatattttc
      121 ggtaattagg ttggcttgtt taactttttc ttcagtaaca ttgggatctt tttcgttgaa
      181 taaaatcgca tttaataatc tttctgcgtg cataccctct cggcagtaat gtaaaacacc
      241 gacatcatta aatgcagtag ctacagagct aatttgtgta gtggctatgc ctaaagcacc
      301 atcttctcca cctaattctt ggaagagctg atgttgtgga aagccgccac aagcgaggaa
      361 gaaactacgc cgaaatacag tgttgcctgc accagtcatt tgcatatatt gccaagctaa
      421 ctcaaaatta gggtgagagc tgtaacgttg atctaagtta ccggttttaa tgctaaccga
      481 accaagccgg tttccggttt aaactcaaaa atcttttcag caacttgcaa tgccccgttt
      541 tcataagcat catcagcatc taaaaaggca attaaatctg tttcactttg taatgctccc
      601 cagttgcgtg ctttggcaac accgccattt tgaggcattt gttccactct aattttatca
      661 ggcacttggg cttgtaaatg tttagctaag gcaagcgtat tatccgttga agcatcatca
      721 ataagccaca atagatttaa tccagactga tttaatacac tttgcactgc acgaacaagg
      781 gtgttttcgg cgttatagca aggaataatc acattaatca tataaattca gctccttgct
      841 cggttacgct taaaatagag gcgtaatttt ctttccagtc gcctaataca atgcgggtaa
      901 atccattatg ctgatggatt gcttgtcgat gcgtatgccc gtgtataagt tgagttgtat
      961 tgtattttgc gacaatttga gcggtaactt cagcgtttac gtccataatt tcagcggatt
     1021 tatcacgctt ttcttgtttg cttttggatc gaattttctc cgcaatacga attcgccaag
     1081 aaagcggaaa catcaaaaag atagcttgtc gccatttttg gtggactttt ttacgaaatt
     1141 gttgatattt cacatcatca gtacaaagcg tatcgccgtg gcaaagcaag gtagatgtgc
     1201 cgaataaatc tataacgtga taatcaggca aaataaccat acccgtttgt tcgctgaatc
     1261 gtttgccaat taaaaaatca cgatttccgc aaataaaata gcattttgta ccgcttgtag
     1321 tgagggtttt gattgcctgt ttaacggttg aaatgagttc agactgctca tcatcgccaa
     1381 tccagaaatc aaacagatca cctaagatat aaaccgcttc tgcaagtagt gctttttctt
     1441 gcataaattg caaaaagagg tgggtaattt caggctgatt ttcatttaag tggagatcgg
     1501 caataaaata gtacgtcatt tgatattgtt gataaaaaag aaaacggttc aattttttac
     1561 aaaatcgaac cgtttgtcaa aggttaatcg gcattaatct ttaaaaatgc cacgaataaa
     1621 ttgtactgag aggaagaaca agaacgccaa tacggcataa agtacatagc tcataattgg
     1681 tttgctgact gtttctgctt cttctaatgg cttgattgaa acaatatttc taaattcatt
     1741 tagccaattg attcgccagc cgtaatattt aatttgcaca cgttgttttt cgttagcgta
     1801 ggcttgagct ttggcttgaa tgtcggcaga tccgaatttg aaataaggag gcaaccccca
     1861 gccggtatct tcattacgat aaaccattac ctttttggtt tcaggatctt ccgtgaataa
     1921 gaaataaaca tcgcgcacct cgccatcagc aggattcgct ttgctgataa taccatcttt
     1981 atccattcgg cgtacttcca tacctgttac tacggtatct tcataacttg gcattgcata
     2041 attaactgca ccgcctaata caataaaaaa tgatagtgag acaagaatca gaaaatactt
     2101 aagtattgct ctcatattag ttccttataa tttaatgttg aataagtgtt gcacattttc
     2161 ggttgtaatg cgagctaatt cttcagttga aacgcctttt aatgtcgcca catattcgca
     2221 agtttcccgc acatacgccg gctggttcgg cttaccacga taaggaatcg gggcaagata
     2281 aggggaatct gtttcaacca ataagcgatc taacggcact tttcgcacga cttctcggag
     2341 ttcttctgca ttgcggaaag taataatgcc cgaaattgag atataaaagc cgatgtctaa
     2401 agcccgtttt gccattgccc aatcttcggt aaagcaatgc aacaccccac cgcatttttc
     2461 ggcattattt tgttccaaca tatccatcgt atcttggcgt gccgaacgag aatggataat
     2521 gagtggctta ttgagtttgt ttgcaatttc aatttgttga acgaaaagcg attgttgcaa
     2581 cgctttggtt tccggtgtgt agtgataatc caaaccagtt tccccaatgg caaccacttt
     2641 cggatcttga gcgaactgaa ataatttatc gtaatcaaaa ggttcatctt ccacattcaa
     2701 cgggtgaacg ccacaagaaa gtgaaacgtc attacgatgg gcggttaagt ttttcattgc
     2761 ttcaaaacgc ccaactgtag tgcaaaccga gataaaatga tgcacccctc gggctttggc
     2821 attttcaatt acttcgtcca cgtttttgtg acgagtttcg tagtctagag aatctagatg
     2881 acaatgtgag tctatgataa ataagtcttt catttttcta aatatagcgt ttatgattca
     2941 tttggttatg taagatgcga acaataaata tatgatctgc ttttattcga taataaattg
     3001 tatgagattg atgtgtgtgc attcgcaagc caccacgaat atattccgca gaagttccca
     3061 ttgttggaaa atcagctaat aaattcaaaa tatgctttag atctgcaaaa taagattctg
     3121 tttgttgaac accaaattga gagatactgt aacgaaaaag tttctcttga tctcggagtg
     3181 cttgagcaga aagtttatac attaagttcc gcctttactc tcaacatcat ttcatcaatc
     3241 gtttcggttg cataaccact agcatcacca tcatcaatgg cttgtcgcaa ctgagctaag
     3301 tattgctctt tttcctcaag cattcgtaaa gcggttctca ctacttcact ggtagagcca
     3361 taacgcccac ttgccaccat ttcatttaca aaatcattta aaggttcgcc taaagtcacg
     3421 ctggttgttc ttgccataat attctccttg tgtgaattat tcatacaata acaaagatag
     3481 ataattttgc aagttataaa ctatattcta gggctagaag cctcttttta cggctaattg
     3541 aaagctacct tctatgagag agggctttta ctcaaacacc aaaaccaact tcgtcaggca
     3601 atctagcaac atcaattccg gattgacggc gttaatttcg gttaaatccc gctgggtttg
     3661 ttggagaatt tgatgccctt taagtaagcc gtgggtcgtt agttgttggc taaaagggag
     3721 aatgccgttt tggagatccg ggtttagcca accgtggctg attgccattt tagcttttag
     3781 ggcatcgcta aagaaacttt ccagccattc gagttgctgt aaaatcagct ctttttcttg
     3841 ggcgaaggct tggaataaca agaagacatc gtggcttttg tagaaacgcc agaaggtttg
     3901 caaaaaggtt tttcgctgtt gcaagcggtc attttcgata aaatttttgc aaattagtgg
     3961 gcgtgagtgg caaaggcgga gtgcaatctc taagtcgtcg gttgagattg ccggaaattg
     4021 tgtttgtagc caagccatta cttctgaggc ttgtggggcg taaagtaccc aagtttggct
     4081 gcggctttga atggtagcta aaactgttgc ttgaagcggt gcttcgagca agaaatagac
     4141 gttttcacgt ggctcttcca aggttttgag cagggcatta ctgcttgcct cggttaaacg
     4201 atcaactcct cgaatataaa cgaccgtatt tcccccttgt tgggcgaaat tctggagttt
     4261 ataaatcaac tcacgcactt ggtcgatacc aatatctttg tcttcaatcg gctcaagaat
     4321 gtggaaatcg gggtggttgt tgctttgcat aagcaggcaa cttttgcatt caagacaagg
     4381 ttgatggcgg agtttttggc tgcaaagcaa ccattcagcc accttgtaga ttaaggtgtc
     4441 tgtaccaaga ccaacatctg ttttgaacag taaggcgtga tgacctcgac cctgtaaaaa
     4501 tgaatcggta agttgttgat aagtgctttc gagccaaggg tacattattt cagccagttt
     4561 ctaattactt gttgaatatc cgcagtcacc tgttcgatgg gttgttcggc attgatgatc
     4621 acggctttat cgttgtgttg ggttaattct aaataacgct ctcgtgtgcg gtagaagaag
     4681 tcaaggcttt gctgttcgat gcggtctaat tcgcctctgc ctctggctct ttctaaacca
     4741 atcaccggat cgagatcgag ataaatcgtt aaatctggct cgaatgtgcc gagtaccgat
     4801 tcttttaagg tttcgagtaa gtgacgatcc aacttacgtc caccgccttg ataggcttgg
     4861 gaagacatat cgtggcggtc gcccagaacc catttgcctt cggcaagggc aggtttgatc
     4921 acattttcga ctaattgaac acgagcagcg tagagcatta gcagctcagc cttatcgtta
     4981 atggcttctt cggtttcgtg tttaattaaa tggcgtaact tttcggcaag gggggtgccg
     5041 ccgggttctc gggtcattac tacgtcatta atgccggctt gttccaactc tttgagaatc
     5101 acttggtgag cagtcgtttt gcctgcgccc tctaagcctt caattacaat aaattttcca
     5161 cgcatattgt tctcactatt tttgttcatt tttgcgtttg cgttcaattt gaatccattc
     5221 tgccaccgct ttattatgct cattcagtgt tttgctgaat ttatgaccgc ccgtgccgtc
     5281 tgccacaaaa tagaggtagg gtgtattatc cgggttggca accgctttaa tcgaagcttc
     5341 actcggcatg gcaatcggcg ttggcggtaa gccgtcaatc tggtaagtat tgtatggcgt
     5401 tgcctcttct aaatctttgc ggcggatatt gccgttataa cgatcgccca ttccgtaaat
     5461 gacggttgga tcggtttgca gtcgcatatt gttgcgtaaa cggttaataa agaccgatgc
     5521 cacttgtggg cgttcggtcg caatgccggt ctctttttcc acaatcgagg caagaatcag
     5581 catttcgtat ggtgttgcaa gcggtagatt ttccgctcta tttttccaag cctgttccaa
     5641 cgccgttttc tgcttttgat aagcccgttt aagcaaggct aaatcggtgg aattgggcgt
     5701 gtagttgtaa gtatccgggg ctatccaacc ttcgattttt tcgtgtggaa tgccgagtaa
     5761 gtcagcgatt tctttttccg atttgccttg tagcgtgtgc tgtaaataat cggctttcgc
     5821 tagttgttcc cgccaaattt taaaagtttt gccctcaata aattgcacgt taagttgcac
     5881 ttctttgccg gagcttaaat gagcgagcaa atcttttact gtcgttaagc ctgcgagtga
     5941 ataagcacca gccttgaatt tgcttaactc agggtataat cgcattaaat aagggataag
     6001 atcggcgtca tcgtgggtga caatgccttg ctcttctaac agagccgcta atttttggct
     6061 ggaaacgcct ttttccaata cgaaaagttg attcggctga accgtgatcg ggtgttcggc
     6121 taaagaggtg agtttttggt agccgtaaaa cagtccaccg caagcaataa cgccggctaa
     6181 gcctaatgca ataaggattt tttttagcat tgatgaataa aataaaagtg ataaaaattg
     6241 actgaattct actataaagc ggttgttttt tcagaaaaat ttgcaaatgg gatttgagta
     6301 aatggtgggt catgaaggat tcgaaccttc gaccaacgga ttaaaagtcc gctgctctac
     6361 cgactgagct aatgaccctc agaggagttt tgaaattaat ggtgggtcat gaaggattcg
     6421 aaccttcgac caacggatta aaagtccgct gctctaccga ctgagctaat gacccttaga
     6481 ggtgttttga agattaatgg tgggtcatga aggattcgaa ccttcgacca acggattaaa
     6541 agtccgctgc tctaccggct gagctaatga cccataatct tgcgtaacga gggcatatct
     6601 tacggatttt taaaactttg gcaagttttt tttatcgaaa aatggttgag tgtgcggttt
     6661 gtaagcaatt tagcaaaaaa ttagccggat ttgttggcgg aaaatgaaaa gagaaacggg
     6721 cttttatctt tttctgaaaa taggctataa tcacgccgtt tatttcacct attatagaag
     6781 gaaaccaaaa tgggcttaga attagttcct gccggtaaag aattaccgga cgatatttat
     6841 gttgtaattg aaattccggc aaactctgat ccaatcaaat atgaagtgga caaagaaacc
     6901 ggggcattat ttgtggatcg ctttatggca accgcaatgt tctatccggc aaactatggt
     6961 tatgtgaata acaccttatc atcagacggt gacccggttg atgtattagt gccaacacca
     7021 tatccgttac aaccgggttc ggtgattcgt tgccgtcctg tcggtgtgtt aaaaatgacc
     7081 gatgaagccg gcggtgatgc aaaagtggtt gctgttccac acaccaaatt aagtaaagag
     7141 tatgaccaca tcaaagatgt aggtgactta ccggcgttat taaaagcaca aatccagcac
     7201 ttcttcgaaa gctataaagc attagaagcg ggcaaatggg tgaaagtaga aggttggggc
     7261 gatgtaaacg aagctcgcca agaaatctta gaatcattcg agcgtgctaa gaaataatta
     7321 tttatttttg aatgccaagc aaatttgttt ggcatttttt gtgggatata aaatgaaatt
     7381 catcaaaaaa ttaagttatt cagttttttt agcaacagtg attaccgctt gtgccacaac
     7441 agaaagcatt aaccaagaag cggctcaaag ttatgctcaa gtgaaaaccc aagctcgtca
     7501 gcaaaatgcg attgacaatt cgtctgccac cgctaagcgg attcacactg tttttcataa
     7561 aatgaagcct tatgcggaaa gagccaacca gactggtgta ccttttcatt gggaaattac
     7621 cgtattgaaa tcggatgaac tcaatgcgtg ggcgatgccg ggcggtaaaa tggcgtttta
     7681 cacggggtta gtggaaagac ttaatttatc gaacgatgaa attgcagtgg taatgggaca
     7741 cgagatggct cacgcactga aagaacacgg taaatcagac cgtacggtta gcgctattac
     7801 cagtattgta ggtgctattg cagatgtggc tgtgactgcc tcaacaggcg taagcaccga
     7861 aggtttactc agcactggcg tggatttgat tgccaccaag ccattctctc gcagccaaga
     7921 gactgaggcg gacgaagttg ggttaatttt aatggcagaa tcaggctaca acccatcagc
     7981 agcgccgaat gtttgggtaa aaatgagtaa agccaatggc gattcaggct tgtccatttt
     8041 ctcaactcac ccatcaaatg ctgaccgtca agaaaactta gcccgccttg tgccggaagc
     8101 aatgaagatt tataacgccc gtaaataatt gacaatcggt tcttttttgc aaaaatgctc
     8161 ttgaatcctc aagagcattt ttcattaagt gttagtaacg cacaaaaccg actaattcat
     8221 ataccttatc taacgttgct ttggcttgag ctcgagcttt ttctgcccct tcacggtaga
     8281 ttttttccaa taatgcttca tcttggcggt agtggtgata acgttcttgc agattggtta
     8341 atagttcgga aaccttatct gctacttctg ttttcaaatg accatacatt ttgccttcaa
     8401 attcggtttc taattcggca atggttttgc cggtaatggc ggagagaata tccaataaat
     8461 tcgagacacc ggctttattc tgtacgtcat aacgcactac tggcggttca tcgccatcgg
     8521 tcattgcccg tttgattttc ttcgctaccg ctttcggatc ttccaatagt ccaatcacat
     8581 tgttacgatt atcgtccgat tttgacattt ttttggtcgg ctcaagtagc gacatcactc
     8641 ttgccccgga tttcgcaata aagacttccg gcactgcaaa aacaggctcg atcaggttgc
     8701 cttcggaatc ttttttgccg tataaggcat tgaaacggtt ggcaatgtca cgggtgattt
     8761 ccaaatgttg tttttggtca tcgcctaccg gcacttggtt ggcttggtaa agcagaatat
     8821 ctgccgccat taataccgga taagtaaata agcccacatt gacattctct tcatagcgtg
     8881 ctgatttatc tttaaattgc gtcatacgcc ccatttcacc gaaataggtg taacagttca
     8941 gcacccaagc taattgggcg tgttccggca cgtgggattg aataaaaata gtgcttttgt
     9001 ttggatcaat gccacaagct aaatacaggg ctaacacatc taaagttgat ttgcgtagcg
     9061 actccggatc ttgacgaacg gtaatggcgt gttgatcgac aatgcaatat acacagtcat
     9121 aatcatcttg cattttcacc cagttgcgta acgcccctaa gtagttaccg atagtcaatt
     9181 cacctgaggg ctgcacgcca ctaaatacaa taggtttgct cattttatct tctcgtttga
     9241 tttgaaaaat ataggttatc ttaacggtta ttgggaaggg ataaaagtac aagcggtcag
     9301 atttattgat gattttgcaa aaaatagagc aaatcagacc gcttgtatct tactcaaaaa
     9361 tcactgaaac ccttgccata atttcatcaa gtaggctttc gggtaaggct tcgataaatt
     9421 ttccatggcg ttgtgcaata tcgactgtgc gaggttgatc gcatcgaata atccctgttg
     9481 tttttaagcc ggcatctttt aatgaaacgg caaagcccag tctttcagca aaagctccac
     9541 cgttagtaat cggcacaacc acaggcagtt tactggctag attaaatgca gttgcggaaa
     9601 caattacaac ggggcggaag cctgattgtt cgtgtcctaa ggttggatca agatcgagcc
     9661 agtaaatatc gccacgtttc ataaaatttc ttttcctatt gccggctcgg ataaccacga
     9721 ttggctttct tcattccttg ctgcctcaaa atcggattgt cttaataatt cctctaagct
     9781 gtatttcact tttgggcggg caggattaat cacgagttgg ttgtcgttta aagacaaatc
     9841 cactttgcta ccgacggaga gcttgagtgc ctctaaaaaa gcaggcggaa tcaccattgc
     9901 aaccgagcca ccgacctgac gtaatgcgat tgttggcata ctttactcct ttaaatcttt
     9961 aggttcggaa agtctaaagc aaacatcaaa agaaaacaaa tgttttcttt ataaccccac
    10021 aattttcaac acatctttaa attcagatgt cacaaaagtc gggttagatt gttcaatcgg
    10081 cacattgtag ttatagccgt aagttagtcc aaccacatca caaccggcgg ctttggcggc
    10141 aatcacgtca ttttctgagt cgccgacaaa aagtaattct gatggggtaa tgccgaattt
    10201 ttcgcagata aaaaacatcg ggtcagggtg cggtttgatt ttggggagcg attgcccacc
    10261 aagggtttca tcgaataaat gataaatgcc gaaagcggaa agcaccggct cgactaattt
    10321 ggtcggtttg ttggtaatca ccaccagcgg gtagtcgttt gctttgagga tttctaaggt
    10381 ttctttcaca tttgggaaaa gggtgctttc ctcgcacaca taggtggcgt agtatttatc
    10441 aaagctcact cgcattttca ccaactcatc ggcttggaaa attctgccgg tgtgagcaac
    10501 cgcattttgg aagaaaatat ctgccccttt accgatccaa gtcagcactt tttcttgtgt
    10561 aaccgttggc aaaccggctt ctagaaacat tgaattggcg acaagagtga gatcggggag
    10621 ggtgttgatt agcgttccgt ctaagtcgaa accgatgact ttgtattttt tactcatagt
    10681 atatccttca aacacaagcg gtcgttttct gcaaattttt tgcaattttt gtaatgaggg
    10741 caaatattga cttgccccta cgtttatttc actttgttta ctttatacgc ccacgccata
    10801 atcagtatgc cgccgataat catcggtaaa gagagtagtt gcccacgagt gattaaatct
    10861 gcggtggtat tgacgttatg gtcgatttct cggaagtatt ccacaataaa gcggaatgtg
    10921 ccgtagccga ttaaaaataa ccctgaaacc gcacctgccg ggcgaggctt ttgaataaac
    10981 cagttgagga taaagagtaa caccacaccc tctaaaaagg cttcataaag ctgtgacggg
    11041 tggcggggaa gatagccacc gcttggaaat aacaccgccc aaggcacatc ggttacacgc
    11101 ccccaaagtt catcgttaat gaaattgccg atacgcccca tacctagccc gaacggtact
    11161 agcggtgcga taaaatctgc tgtctgccag aaattgcgtt tttggcggta ggaaacccaa
    11221 atcattgcta caatgacgcc gattaaaccg ccgtgaaagg acattccgcc ttcccaaatg
    11281 cgaaagaggt agagcggatc ttgtaagaaa cggtcgaagc tataaaagaa cacatcgccg
    11341 atacgcccac ctaatactac gccccagaag caagtataga ctaagctatc cacttgctcg
    11401 gttgtccaaa ctccattgga atttttcgcc cgtctcattc ccagccagta ggcaaaggca
    11461 aagccggcta aatacattag cccataccaa cgcagggcaa tcggaccgat ttcaaacaca
    11521 atcgggctaa tttgtggaaa ttggataaat tgttcgttca tagtgtcctt attttaaaaa
    11581 catattgatg gcgatacaga ccaaaagcac cgcaaaggct tttttcagca tcggcacagg
    11641 tagagcgttg gcggcacttg cccccatttt tgaggtgaaa aatgaagttg ccgtaatacc
    11701 aaacagagcc ggtaaataaa cataaccgag agaataatca ggcattcctt ctaagcccca
    11761 gccacttaca ataaagctga ttgtgccaga taaacctaaa aatgctccgc aaaatgagga
    11821 agtgccgatg gcacgtttca tttctaagcc tcgatcgttt aaaaatggta caataaaggc
    11881 tccacctgcg atccctgcca tactggctaa cgcaccgatg attgaacctc cgattatcgt
    11941 cgtttgaacg gtaagtggtt tatttttcgg tgctcttttt attgaaaaaa tcattttacc
    12001 tgcaaggtaa agtaccatta ccgcaaaaat tctagacatc agttgcggat cgaggcggct
    12061 taccaccaag cccgatagaa aaaccgaaac catcaacgct ggaataaaat atttactggt
    12121 ttggatatcg acattgccta acttatgatg gcgttgtgcc gatgcaaagg cggtaataat
    12181 aatggttgaa aatgatgtgc cgagtgcggt ggacattata tattccggcg gtacacctgc
    12241 catgggcagt aggaagacca aactcggcac gatgattaac ccaccaccaa tgccgaacaa
    12301 gccggctaaa aagccgacaa acacccctaa aaaaaggcag cttaataaaa tagtcatctt
    12361 attttccttt ttgattatgt tgatgccaag gacgataagg cttacgagct tctcgtttat
    12421 aggctttggc agaatcctga gaggtttttt tataagtatg gggcgaagtc tcgccacgct
    12481 caatgcgtgg tttctcaccg gttttatcgt cagtcgcttt ttgaatattg ttttgcaaaa
    12541 cctgtgcaaa ctctttcatc gctttgcgat aaacatctcg tttaaaagag accacttggc
    12601 ggactggata ccaaaagctg acccaacgcc agccgtcaaa ctccggattt ttcgtggttt
    12661 tcaaattaat caggctttca tcaccgatta attgcagtag aaaccaacgc tgtttttgcc
    12721 cgatacagac aggaccagag ccttcattac gtaccaagcg ttttggcagt ttatatttta
    12781 gccaatattt agacgcccaa agcaatcgta catctttttt acttaagccg acctcttcat
    12841 aaagctcacg gtacattgct gcttcaatgt tttccccctc attaattcca ccttgcggaa
    12901 attgccaaga gttttgacca aaccgttttg cccacagaac ttgcccgtgc ttattacaga
    12961 taacgattcc aacatttggg cggtagccat cgaaatcgat cactcgacca cctaattgat
    13021 aaaaattcta gaatgggaga attgtttcat actttgggtt gatttgcaaa aaaaccataa
    13081 aatataaccg cttgtgaata actttgtgga taactattga atataagtgg tataagttga
    13141 ggataaacag gcggaacgtt gtaaaacaga gcaattaatc agatctaaaa atgcgatctt
    13201 tttcttaagc aatgatctgg ataaagatca agttgttgcg ttttttctcg tcaaaataag
    13261 tttaaatttt aaaatgaata agcagggcaa tttttgcttc gcaaataaag cagagttatc
    13321 cccaccattt gtggataaag atgtgatagt ttttcaaatt aggcgtgaat aactcaaatc
    13381 agccttttgc tatttccata aattataatt aaatcaaata gttagtgtca tcttttcaat
    13441 ctgtgaataa tcaattgttt tgttggttgc tttttgtgca attgtatttt tatgctaatt
    13501 ggtttgtaac aaaaatgtga tctatttctc atattttgca aatagtagta attcttattt
    13561 ttattttaaa gtagaatagc cgcacttttt tcttaatgat ttatgaggtt ttaaatgatc
    13621 atttcatctg caaacgatta ccgccgtgcg gcaaaacgtc gtgttccccc ttttatgttc
    13681 cattatgcgg atggcggttc ttacgccgag cagaccttac gtcgtaatgt gagcgatttg
    13741 gaagacatcg ccctgcgtca acgtgtgtta aaagatatgt cgcaactaga caccggcatc
    13801 gagctgttcg gcgaaaaact gtctatgccg gtgaccctcg cccctgtcgg tgcattagga
    13861 atgtatgccc gccgtggcga agtgcaagcg gccaaagccg cagataacaa aggtattccg
    13921 tttacccttt ccactgtctc tatttgcccg attgaagagg ttgcaccggc aatcaaacgc
    13981 ccgatgtggt ttcagctcta tgtgttaaaa gatcggggct ttatgaaaaa tgcattggaa
    14041 cgagccaaag ccgccggttg ttccacgcta gtgtttaccg tagatatgcc gacccccggc
    14101 gcacgttatc gtgatatgca ctccggaatg agcggcccat acaaagacat tcgccgtgtg
    14161 ttgcaggcaa tggttcaccc gttttgggcg tgggacgtgg gcattcacgg taaaccccac
    14221 acgttaggca atgtgtcaaa ctatatgggt aaaccgattg atctgaacaa ctacatcggc
    14281 tggctgaccg ataatttcga cccatcaatt tcgtggaaag atttagagtg gattcgtgaa
    14341 ttttgggacg gcccgatggt gatcaaaggc attctcgacc cagaagatgc taaagatgcc
    14401 gtaagatttg gtgcggacgg tatcatcgtc tccaaccacg gtggtcgtca gttagatggg
    14461 gtactttctt ctgccaaagc cctgccaagc attgccgatg cagtaaaagg ggagatcaaa
    14521 atccttgccg actctggtat ccgcaacggc ttagatgtgg tgagaatgct ggctctcggc
    14581 gcagattgta cgatgatcgg gcgttccttt gtttacgctc ttagcgccgc cggtcaagcc
    14641 ggtgtggaaa acctgctcga catcttcctt aaagaaatga aagtggcgat gacacttacc
    14701 agcaatgcta aaattagcga catcggcaga gatgctttgg tagatttaag taatctttag
    14761 ctcaaatagc cacaatccgc acgttttagg tgcggattgt tattttagat aggctaattt
    14821 ggcattttgg taatattaat gcggtaatat ttcaatgtat cttggttgaa aaagagaaat
    14881 tcatcgttat ctttagtttt ttcgcccagc acataaatgt tattgcgatg aatagataag
    14941 acataatatc gcttattttc aatttcaaga taatcatacg ttgttctcag ctcagggcga
    15001 atgtagccaa tactcaaaga aagtaagcta aaatagatga aaataaaaat atagaaaaaa
    15061 ccgaagcgtt cttcgcttaa cattttttga atatctaagt ggaatacgcg gtggccccaa
    15121 tgtttgtgaa ataataatac tgatagggta gttgtcccta gatagaggta gttgtcccta
    15181 gatagagtag gtgtaaatac attggcactt tgccaataaa cagatagaaa ctgatcatta
    15241 ctggcaagct aaaaatagta acaagaacac tcacccgtag ccagccaagg tatttaaagt
    15301 aatgcagctt aaaaacttta ttaactaaag cgtatcctat caaataaaaa agaaagatag
    15361 ttaaaaatgt gccaaaaacg taggctagtg cgcgagctat accggcatta ccaacctcaa
    15421 catgccacca cgggtagcca tgaaaagcag caatacccca agcataacag taagcggtag
    15481 aaaaagagat taaagtaaag aaagcgagag taagagaaga gttgatgaat ttctgattag
    15541 tcataacagt aaatagattg cacctactta gttaaagatg aaacacaaga aagcagactg
    15601 agtttagctt ccacccaact cctttgttta gaggagaact ttattaaagc acgacttttg
    15661 ttgtatttca aacctttgtt tttatacaaa acaaccgtgt tgtaaaaaat gatcgtaaac
    15721 tgaccgcttg taatgcactc tgaatatatc gaaacatgat aaaaatgata aagcatgttt
    15781 cgataattta ctgtctttag tcttttaaat gttttgcatg aaaggctata tgttcaccga
    15841 taaagctact aatgaaatag tagctgtgat cgtaaccatc acgtaaattg aattggtagg
    15901 gtattccaag tctatctgcg gtttcacaga aaatttccgg ctttaactga tcgctcaaaa
    15961 agctgtcttg gctgccttga tcgattagaa ttggcaagct tgggcgatat ttttccagca
    16021 atgccacgct atcatacgcc ttccaagcgg tctgatcttc gcctaaatat gctaaaaatg
    16081 ctttttgccc ccaaggaact tgggttgggg cgacaatcgg tgcaaatgcc gatacacttt
    16141 gatattgccc cggattttta aatgcaatgg ttaaggcacc atgtccgccc attgaatgcc
    16201 caaaaattga ttgtttaccg ttagtcggga aatgagcatt aatcaatgtt ggcagttcgc
    16261 tgacaatgta atcatacatt tggtaatgtg ttgtccattc gccttgcgta gcatttaggt
    16321 aaaatccggc accctgacct aaatcataag cctcatcatt agcgacattc acacccctag
    16381 ggctggtatc cggtgcgacc acaatcagat gatgttcgtc ggcataacgt tgaaagccag
    16441 atttagtgat gaagttctgc tcggtacagg ttaaaccaga aagccaatat agtacgggta
    16501 gcttttgtgt tttagcagat tgcggcagat aaatagcaaa tttcatttca cagtttaagc
    16561 tggctgagaa atgttgccaa acctgttgtt caccgctaaa acagcggtag ttttcaaatt
    16621 gttgcataat attccttaca agcggtttaa ttccgctgat tttttgcaaa aataaaggcg
    16681 gaactcaccg cctttatatt gtaatatcaa cctttcaaac ttcccatatc aatcacaaac
    16741 cgatatttca cgtctgattt cagcattcgt tcataagcat cattgatgtt ttgcatatca
    16801 atcatttcca catccggcac aatgttgtgt tcggcgcaga agtcgagcat ttcttgagtt
    16861 tcctgaatgc cgccgatgac agaggcggaa atagagcggc ggcctaaaat catcggtacg
    16921 gtgttgatgg tttgctccaa ctcaccgacc aagcccacca gcaccaatgt gccgtccaac
    16981 gctaaggttg ggatataagg tttcaagtcg tgggtataag gcacggtatc gatgattaaa
    17041 tcaaaggtat ttgcaacgtc tgccatttgc ttttcatcgg tagaaagcac cacacggctt
    17101 gcgcccaaac ggtaagcatc atcggcttta cccagtgagc gagtaaaaag cgtaacttcc
    17161 gctcccattg ctttggcaag tttaaccgcc atatgcccca gtccgccaag ccccacaaca
    17221 gcgacttttg agccagcttt gacattccaa tgacgcaggg gcgaataggt ggtaatgcct
    17281 gcacacaaaa gaggggcaac cgctttggtg tccaagtttt cagagacttt taatacaaaa
    17341 tcttcactca ccaccacgca tgtgctgtaa ccgccttgtg ttggtgtgcc gtcaaagcgg
    17401 tcaataccgc cataagtgcc gatgttgccc acttcgcagt actgctccaa accgtgctgg
    17461 caaggactgc attcacggca ggaatccacc atacaaccga caccgaccaa atcgccgatt
    17521 tggaattttt tggcgttttt accgactttg ataatacgac cgatgatttc gtgccctggt
    17581 acaagcggat agctttgcgt ccagccccaa tcattgcgag ccatatgcaa gtctgaatgg
    17641 cacacgccac agtacaaaat atcaatcaaa acatcgtctt caagcaattc acggcgttca
    17701 aaactgtgtg gggcaagtgg tgtggttgcc gaaaaagtgg cgtaggattt gatagggtaa
    17761 gccatttttg gggtttaaat ggctgaaatg gcaattacta tagtgccgat gatttattat
    17821 tgaaaatcaa gatttttgat aaatcggtat cagttaaaat gataattggg ggttttcaga
    17881 ctgactgaaa aattattttg cccattttaa aaacaaaaac accgccctca tcacaaaagc
    17941 ggtgtttttc atcaaaattg tgtcaaagca tactctgcca attctgtaag cacttcatca
    18001 gcaggacgct gagtgggttt taaattgagt gccaaatgtt tcacgccttt ttcttgttct
    18061 tttgcccaaa agtctgccaa gccttttgca ccaccacgca gataaatgtt gttaaataac
    18121 tgtgctttgg cgtttttgtc gtccaaaact tccacaaatt gagcatagcc aaatgctgtg
    18181 ggggtgtctt tttggcgtaa atcggcaagg gtgttgatga tgtttgcggt gtcggcagga
    18241 ttcacaccgt gccaaatcca cgcatcaggt acattagcaa gccagtccat ttcttgcctt
    18301 gctcgtccaa tcgccacaat gggcaagcgg tgtttgggtt tggggagcaa atccaaattg
    18361 tctgttaaat cggcataatg tttgcctttg aaatggggaa aatcctgctc ggttaaggtg
    18421 ttaatcaaat caatgctttc acgaaaacgc tcgctacgag aggcaaaatc cgccccaaat
    18481 gcagggtatt ccacaggtct atcgccagag gataagccca ataaaaaccg tccatgactc
    18541 aaactatcca cacttgtcgc cattttggca atgtgaatgg gactacgcaa aggggcaatc
    18601 agccctgccg tgccaagggc gatgttttgg gtgtgggcgg acaaaaaacc aagtgtaacc
    18661 atcgggtcaa gcccttgccc cacatcgcca aaatgagggt cataaaacgg cacatctcgt
    18721 acccacaatg ctgaaaagcc caagttttca gccagccgtg cattgtcggc aatggtggtc
    18781 aaattgtctg gaatgtgatt ttgatagccc ataaaggggg caattaagcc cagtgttaat
    18841 tgattttgcc caaaaacttg ggagaaaatg ggggaaagcg tgttcatttt ggcgtacctg
    18901 tcttatttaa gataaggtat tttaagggct tttgagtttg cttaaaatgg gataaattga
    18961 gaaagtgttt tgctaaattg gcataaatag acgctttcaa gctgactgaa aatttgcaaa
    19021 atttttaata aaaatgaccg cttgcctttc aacaagcggt cattcccctt taatttttta
    19081 ccaccgtaaa caccttattt ttcagccgat attcactttt ttcatcgtga gccagttgca
    19141 caatggttgg cttgcgttta cacaattcac gcattgcaca cgccgtcaat gttgccagca
    19201 agcatatctt gttcagagta agaggcatcg ccgccaatca aaatataatg ctcgcccata
    19261 tccaccacca ccgccaaatg ccccagcgta tgtcctgcgg ttggcacaag gcggattttg
    19321 ccgtctttgg tgagtttatg actgctctca aaactttcaa acgccccatc attaaaatag
    19381 atgccatcag gcttaaacca atcaggatag tgcattgtta aataaccgtt catcaccgca
    19441 ttgggggcgt tgattgcctg tttttcagtc tcactcatca caaatcagct gtttgggaaa
    19501 ttgggcaatc cgcctgcgtg gtcgccgtgc atatgggtca ttaccaccgt gtcaatgcgt
    19561 aaagggtcaa agccgtttgc ctttaaaatt tcgcccactt cttcgtgttt tttgacccca
    19621 cgccgttcgc aaaactgcat aaacgggtgc caccacggct gatagccctt gtcgttggca
    19681 cgactgcttt cgcccgtatc caccaaaatc aaaccgtcat cgtgttcaat cagccagcaa
    19741 ccaatcggca gtttaggcga ccatttttta tcggtcagca catcaagcac acgggcagga
    19801 cgggcaaaaa agcgtgccac ttgatgatga attttgattt gtacccaacc tgttgtcaga
    19861 caatgcactt taatcatttt tgtgttctca ttaaaaaatc gtgggcatat tgtagaaagt
    19921 gcggtaactt ttcacaaaca ttaaaaagtt cgtatttggc tggatatgca gataaaatta
    19981 caaaaatgta tgcttatttt gaaaaaagat gaacgattta agagtaatca aaacccatct
    20041 agcaatccaa aacgctttga ttgaattatt agatgaaaag ctgtttgaaa aagtgcaagt
    20101 ccaagaaatc attgaaaaag ccttgattaa ccgcaccact ttttaccgtt attattcggg
    20161 cgaaagtgat ttggtcggca aattgataaa agaggtgaag gcggaatatc aagacctgct
    20221 caaaaagcgt tttgaaagcg gtaatttgct gcgatttatg caaaccattg gcaaccgctt
    20281 attggaaaaa agacggctga ttttggcact ttggcaaatc aaaacccctc gccatcattt
    20341 gtatgacgat atgcacatgc tgttaaaaaa cgcctttatc gcccacgcca aacggataac
    20401 atcagatgat aaaaactggg ctgagaaaaa ttgggattac caagcccata tttttgccac
    20461 cattgccctt gaaagccata aatattattt tgaacaaggc aaacttttgc ccattccaca
    20521 ggtgtttgag gagtggatag aaatggtgca ggtgttgaaa agtgtttaga aataactggt
    20581 aaaattttcc ataaaaaaca ccgctttcat cacaaaagcg gtgctttcaa atcatcaaac
    20641 cttaaccaca atcttaccaa tctgctgatt gcttgccata tattcgtgag ctttaaccat
    20701 ttcatcaaag gcaaagattt tgtcaatttc agggcgtaac tgaccgcttg ccaaaccgtc
    20761 atagacaaag gttttggctt gtgccaattt ttcaggtacg gtggtaattt caaagagttc
    20821 atacccccgc acggtcaaat gcttacccaa aatcgggaac actggcacag caatatcatc
    20881 atggcttaac gctccataaa tgatgtaacg accatcttgt gccattgcat tgatgatttt
    20941 tgccgcctct tttctgccca cagggtcaaa taccacattg acgcctttgc cattggtgat
    21001 ttcaaaaagt ttggcggtta catcgtcttc gcttgtggca atcacaaaat ccgctccttt
    21061 ttccaaaagt acatcgcctt tggcgtgggt gcgagacaag gcaatcacgg ttgccccttg
    21121 cattttggcg atttggatac tggctaaacc aaccgaactg gttgcaccgc ccagcaccac
    21181 aaaatcgcct ttttgtactt tgccaaactc aatcagtccg ccataagcgg taacaaacgc
    21241 catccaactg gcggacgctt gttccattga caaattatca gggtgcttga ccacagcgtg
    21301 ttttggcata ttgacgattt cgccataagt gccgtattcg gtaaacataa aggacggaat
    21361 aatgctcacc ttatcgctaa tggcaacttc gttcacaccc tcgccaatcg ccacaatcac
    21421 accagcccct tcataaccca aagtcgcagg gaatacaggg tcaatcacat acgccccttc
    21481 acggtacatc atttcggcac ggtttaagcc aatggcttgg atttggattt gtacttcgtg
    21541 tgcttttggt gcaggaattg ctacatcaac gatttgcaag acatcaggcg aacctgtttt
    21601 tgtaaattgg atttgtttgc tcattgtttt gaccttttgt gtaaataatg ggcgtatttt
    21661 aatgcaatga atttatttta aacacaacat caattgcaaa acacttttgc taaatttaca
    21721 taaatacatt ttcacaatgt ctgaaaagtt gttttgcaaa ttttaaaaag aaaaccaccg
    21781 cttgccgatc acaagcggtg gtttttgtgg gttattttgc aagaggtgtc agcttggcta
    21841 cagtaagcgg ataaatgcga cgccggctaa gagtaaggta acgccgatga tctgcagcgg
    21901 tagaatgggt ttttgtgtaa tgccgaacag accgaattta tctaccagca ggctgccgca
    21961 aatcaggcca gagaggacga gcatcaccac cgagcctgtg ccgatttggg ggacgagcca
    22021 aacgccagcg aggataaaca ggctgcccag tatgccgccg ctccatatcc aaaacggttt
    22081 gccttcggtt ggctggcaga gtttcggcag gcttttttca taaaacagca ctaccagtaa
    22141 taagccgatg gcaccgacac cgaaggagac tgttgctgcg ccgagtgatg agccgggctg
    22201 tctgccgaat tcgccattaa cggcggcttg ggttgctaat gcggttccgc ctaatatgcc
    22261 gactgcgcgc cacagccata aatttgcgtt ttctttgcgt tttagaccgg acagatgggg
    22321 cagtaccacg gcaatccata cgccgaataa gactaaacca atgccaaaca ggcggctggc
    22381 cgtgaaggct atgtaaggcg agttaagcca agcgaaagtg tcgatcagca cgcccatcag
    22441 cacttggcct aaaatcggca tgaccgcagt ttgtacgccg ccgagcttgg ggaagatcag
    22501 tacgtttgcc gttagcccca ccatgccgag taatccgccc gtccatgccc ataaggggac
    22561 gttgcctaaa ttgtcgaggc taaatgctgg tgtttgttgc atgatgagcg agagtccgag
    22621 tagaaacagg aggcctacgc tgaaagagac aaacgaggtt aaaaatgccg cacccacgtg
    22681 catacgcaaa cgggcgttga tggctgattg aaatgcaatc agcacgccgg ctaaaatacc
    22741 gataataaat gtcatgacta actgggttgt gctgccgcct caaaatgagt ggtggttgaa
    22801 aagaaatgcc gtctgaatgc ggattcagac ggccttaagg cttggtatcg gcgtttacct
    22861 gatgttgaat agccgttttg cctagccggt ttattcgatg aatttcacca cggtttcgaa
    22921 atctttacgt gctttttggc ggatttcttt atcacggtaa ccgaaggtac acatcaccga
    22981 tacgccccat tcgcttgggt caaataatcc ttccgctgcc aaaatatcgt tgacttcttg
    23041 gtaagcgaaa ccttctatcg gacaagaatc tacgccaatt aaagctgcac cggtcatcat
    23101 attgcccaat gcgatgtagg tttgtttgct tgcccagtca aacaggctgc gttcgctgtc
    23161 taaaatgccg atatctttct cttggaattt tttatacacg gccatggctt tttcgcgcgc
    23221 ttcgccttgt aaacctcgtc tatccataat ttcagaaaaa tattggctgt cgtaacgggc
    23281 atttttcttc gctaaaatca ccacgatatg gcttgaggtt tccatagttg gaatgcccca
    23341 gcagtaaggt ttgatttttt gccgtaattc agggttttgc aacactaaaa actgccaagg
    23401 ctctgagcct accgaacttg gacttaaacg accgagttcc agaatatagt tgaaatcttc
    23461 agccggaatt tttctgctgc cgtcgtaaga acgggtagat gcacggtaat gaaaggcatt
    23521 gattacgtct tctttgttga aaaattgcat ggaacactcc taaaaatgca aaacagtctt
    23581 ttcagacggt ctgaaaagtc tagatgaaat acggataagt ataaaagatt taagttattt
    23641 ttaataattg ataattttga tatttaggta taagttgacg tgatgagaaa aaacagaccc
    23701 tctgaatgtt caggcggtct ttaacgttgg ttgtttacat aaataatccg cgttcatatt
    23761 gcttcggtac aaactgcatt tcactgctgt ctgctgcatt ttggtcatat tgcgcattca
    23821 atacccagta cggatcgcgc aataaggctc ttcccacagc cactaaatcc gcatcgccca
    23881 tacctaagat atgatcgcct accgccggat tatccaacat acctactgca attaccggtt
    23941 tgcccgtagc gagcttcact tgacgggcaa agtctacttg gtaacctgcg taaaattcgg
    24001 ggtgattacc tgcatgcaat acaccatcac caccaccgct gatgtctaag acatctgcgc
    24061 ctgcatcggc aaaacgtttc gctacctgca aaccataatc caagccaaag ccgttttcac
    24121 cgtattcttg tgcagaaatg cggacaatta acggcatttc agacggcatc acttcacgtg
    24181 ctgcctgaat cacttgctcg ccaaacaaca ttttgtcttg gccgtactca tcactgcgct
    24241 gattggattt cggcgaatag aattggtgaa ttagataacc gtgtgcgccg tggatttcaa
    24301 ttgtatcaaa gcctgcctca acggcacgtt tgaccgaatc cttaaaggct tgaaccaatg
    24361 ctttgacttc gtctgtcgtc agctcgcgag gtgtaatcag attttgtccg gcataatcca
    24421 actcaccgta gtgaattgca cttggagcca ctgcatccgg ctcgtcttgg gctttgcgtc
    24481 cggcatgggc gatttgcaca ccgatttttg ccccttgagc atgaacgctg tctaccagtt
    24541 ttttgaatgc ctgttgttgt tcatcgttcc ataagcctaa gcagtttggc gtaattctgc
    24601 cgtttggcgc cacattggtc atctccacaa taatcaagcc gacaccacct actgcacggc
    24661 tggtgtaatg cacgaaatgc caatcgttcg gtacgccgtt ggttgccgaa tattgacaca
    24721 ttggtggcat aaccacacgg tttttcaatg ctaagttttt aatgttaaac ggggtgaata
    24781 attttctgaa cttcgccatg ttgccttcct taatgaaata gattaggtgg aatgataatt
    24841 cagtgctatt atctattcaa attgattatt gtgatagtta ggtataaaaa tgagtgatat
    24901 aagaacactg gatttcaatt tgctcaaagc ttttgtggtg ctgctggacg aatgcaacgt
    24961 tagccgggca gcacaacgat tatccatcac ccaaccggca atgagcggta ttttaaaccg
    25021 cttgcgcgag agttttaacg atccgttatt tgtgcgagtg caacacggta tgcagccaac
    25081 cgaccgcgcg ttgcaactgg ggcaaaccgc acgcaacatt ctgcaagata tcagctccat
    25141 gctgcaacca cccatattgg aaccggaaca tctgaatatg accttgcgta ttgccgcaat
    25201 ggattatgta caacaaatta ttgccttgcc gctgattctg cgtttaagac ggcttgctcc
    25261 gaatgtaaaa gtcgccttac tgccggtgca ggggcaaaat atcaaaactt tgttcgagca
    25321 aaaaaaaatc gatcttgcct tggtcagccg ccaacattta agcacggata cgctgaaaac
    25381 ggtattatat gaagaacgct acgtatgcgc gatgagcaaa acacacccga tggcgcaaac
    25441 accgctatcg ctcgatcaat tctgcaatct tcccttcgca atgctttctt acaacggcgg
    25501 agaattcagc ggagctacgg atctagcgtt acaaaagata ggactacagc gcaaagtaat
    25561 ggtctcggta aaccatattt ccctgctgcc ccagctgcta caaggttccg acttagtcgc
    25621 agtattgccc gaacgcttag caaaaacctt acccaatgtt tatttacaac ctccgcctat
    25681 agaggtagaa ggcttcacca tgatgatggc ttggcacgaa agaaccgaac aagatacggc
    25741 gcatcgatgg ttaagagagg tgctgcaggg tgtggtaaaa cctaaacagg ctctttaatt
    25801 attctttctt ttgctatgaa aaaagccgtt tatattttta gataaacggc ttttttgcat
    25861 tctaatatta gtatttttct acaaactgag cataggcatt aatgaagttt tgcattgagc
    25921 tttttaatgt ctcagaggca atttcaccct gttcatcaaa tacgcctgta aataagtttc
    25981 ctacgtttaa tgcgaaaggt aaggttggca tatttacaaa tgagcctgaa gtaatagtac
    26041 gtacttgatc agctgcacgt acaccgcctg ccgggcttgc gccaacggtt acgatacctg
    26101 ccggtttgcc aatccatttg ctttgcccca ttgggcgaga aaccacgtca atcgcatttt
    26161 taagcattgc agaaaagctt gcattatgct caggtgtgac taataacacg ccatctgcca
    26221 cagcaaccgc ttcacgcact ctggtgtatt gtgccgggct gttttcatct aaatcacggt
    26281 cgtaaagtgg taagtctgca atatccacaa tgtttaattg aatgcttgca ggtgccattt
    26341 tttgtaagtg acgaacagtc aagtgactaa atgaagtttt gctgccgcta ccaattaata
    26401 ctgcaatttg ttttgccatt ttataattcc ttagtacata gagaatatag gcattttatc
    26461 cctttcaatc tgtttcataa agcgcttatg atgaaaagca ctatttactt atattaaata
    26521 attttgcaaa ttttaggcca aatttgaccg cttttatctt tagctaaaaa ggttataatt
    26581 tgtagaaata gatcttaatt tagggttttt atgctttttc taaacaaaat aaaacagctt
    26641 ttcatcttcg cctttacgct agtgttatct gcttgcagtt tggttgttta taagccagtt
    26701 gaaacaatta aacaggtaaa tgttgaaaga ggttatcgac aaaaaaatgt gatcgctgaa
    26761 agtgcaaaag acggtaatat tgttgtcatc atgttttcag gtggtggaac aagagcggcg
    26821 gcgcttggtt atggagtgtt ggaagagttt aaaaaggtaa gggtgaaaga aacaaataaa
    26881 ggtaatactt tattagagaa tatagatatt gcctttggcg tatcaggtgg atcgatatta
    26941 gccacttatt ttgcgttgga aggaaaggat atcattccta aatttgctga ccgtttttta
    27001 aaagcgaact ttcaaaaaga tattattaca gaggtgtttt cgttatccaa tcttcctcgt
    27061 ttaagttctc ctcaatatgg gcgtggtgat ttattgcaag aacgcttaaa ttttgccctt
    27121 tatcatggta aaaagtttgg tgatttagtg aaaaatcgta aaggaccttt tgctgtgatt
    27181 agcgcaacag acatgaacat tggtcaaaaa ctgaccttta cgcaagaaac ctttgatggg
    27241 ctttgtttaa atttgaatga tttagaaatt tcccgtgctg ttgctgcttc tagttctgtt
    27301 cctctgattt ttgcgccgct tacactgaat aacaatggtg gaaattgcca ttttagtatg
    27361 ccacaagaat ttagtgctag agaaaaagca attgatggac taattacaaa aaatattgaa
    27421 gaaacgaatc atatactcag cctttatcaa gatagtaaag aacgcccctt tatccattta
    27481 gttgatggtg gattaacaga taatttaggg cttgccagtg tgctggaaat atctgatgtt
    27541 atgggtattg aagagatgta ccagtatatt catcagctta gggtgaaaaa tattgtagtg
    27601 attaatgtaa atgcgcaaaa tgaagtatct agcgagatcg ataagaccgc aaatgtaccg
    27661 ggggtggctg atgtagtgaa tacaatagtt aatgtgccaa ttgatagaac gacacaaatt
    27721 aatttacaac gttatcgcca gtttacagat ggttggaatg aatatgcaaa taaacagcca
    27781 tcaaagatcg aaatgcattt tgtcagttta ggtttaaaag aattacctga tggtgattta
    27841 aaaaaagatg tgctaaatat tgcaacatca ttttatttgc cggaagagga tgtagataaa
    27901 ttacgtgaag ctgctcgggt tttattgcag caatctcaag aatataatgc ggcattaaaa
    27961 acactgcagt agtaaaaaac cgaccaagcg gtcggttttt ggtatttttt tgcaaatatt
    28021 tattcgctga tgtcgtttaa atccaacaac tcttgcgaaa gaataatgcc ggttaagtca
    28081 gcataaacgt aatcttcggg gaagaaggtt acaccgccaa aattcacagg cgtatccact
    28141 tcgccaatgt cggtattatc tgctcccact ggaattggcg ctaaagcatg aataccgata
    28201 tctaatcttt ccaaaatatc taattggcga accgcaccat aaacgatgat accttcccag
    28261 ccgttatcta cagcaagttg agccagctct gcgtcaatta aggcacgacg aaccgcaccg
    28321 ccaccatcga ctaacagcac tcgcccttca ccctcttctt ccaaaacttc agcaattaaa
    28381 ccgttgcttt caaagcattt aaccgtggta atcttcccaa agaaggaaga agcaccgcca
    28441 aagcttgaga aaattggttc aaccacatca acttggtcag aataaagatc gcaaagtgca
    28501 gaggtatcaa tacgcataat atgctcctgt tcgtagatta tttagctaaa gtataaacct
    28561 tcgcccaaaa tttgcaaaat tttatcgaaa aaagaccgct tacaggcttt tttcttatgc
    28621 tttattttct agtgaaccgc ttttaatatg caattccatt tggttgtaag gaatagatat
    28681 acctgcttca ccaaaggcta attttacttg ttcgataatt tcccaatatg ctgcccagta
    28741 atttggtgtc tgaacccaag ggcgaacaac aagttgaaca ctatgcggtg ctaaagcgcc
    28801 gactgctact acaggtgccg gatcttttaa tacataagta ttggcgtcta aaatgcgttg
    28861 gataatctct ttcgcctctt ttaagttaga ttcataagaa atatcaaagg tgaaatcaat
    28921 acggcgtgtc gggttgttag agtagttgat gatgctgtca gaaaacactt tgccgtttgg
    28981 taataacacg gttttgttat cgccggtgcg aagttccaac actaaaagcc ccatttgttc
    29041 aaccacgccg gtcattccgc cggtttcgat taaatcccct ttgcgaaatg gcttgaagat
    29101 taacaacatc acgccggcag caaagttttg taatgagttt tgtaatgata aaccgatggc
    29161 taaaccggca gcaccgatta atgcgaccag cgagctggtg ttaatgccga tttgtgaaag
    29221 cgaggcaatc accacaatta acagcagtaa aaaatagctg attgagacaa taaaactttg
    29281 cagcatttca tctttggttg attttaatgc ggctttaccg agtaaacggc taattaggcg
    29341 ggcaagaaat ttcccgacta caaaaatcgc aatcgccagt aaaattttgg tgccataagg
    29401 gataatccac tcatttagca tagtttcaat attcatatta ctgactttgt ggattacttt
    29461 ttcggtttcg gcaaccacgt caatgtttgg agctgtttcg gtgacttttt cagtcatatt
    29521 gtttccttaa aattaaaatg aaaaataagc ctagcgaatt tgcctcactc gctaagcggt
    29581 tttgtgctag aatttagagc aaaattttct ctaaaagaca agataatgac aacagaaaaa
    29641 gtaattagtg ccggcgttca attttttacg atcagtgaag atgaagccgg acagcgttta
    29701 gataattttt tattggcaaa gctcaaaggc gtgccgaaaa gtttgattta ccgcattgtg
    29761 cgaaaaggcg aggtgcgggt gaataaagga cgaaacaaac ccgaatataa attacagcct
    29821 gatgatttag tgcgtgtgcc gccggtgcgt gtggcggaaa aaaatgaagc cccaatttcg
    29881 actaaattaa acaaagtggc ggagctggag agccaaattc tgtatgaaga tgagtcaatg
    29941 ctagtaatta acaaaccttc aggcattgca gtacacggtg gcagtggttt aagttttggt
    30001 gtgatcgaag ccttgcgtgc attacgtcca caggctcgtt tcttggaatt ggtacaccgt
    30061 atagaccgtg atacatcagg cattttgctg gtggcgaaaa agcgttcggc gttacgttcc
    30121 ttgcacgaac aactgcgtga aaaagtagta caaaaagact atcttgccct tgtgcgaggg
    30181 caatggcagg ctcataccaa agtgattaaa gctccattgc taaaaaacga acttgccagc
    30241 ggtgagcgaa ttgtacgggt gagtgaagag ggtaaaccgt ccgaaacccg tttcagcatt
    30301 gaagagcgtt atgccaatgc cactttggtg aaagcttcgc ctattaccgg aagaacccac
    30361 caaatccgtg tgcataccca atatgccgga cacccgattg cgttagatga caaatatggt
    30421 gatgcggaat ttgacagcaa aatgaaagaa gtgggcttac agcgtttatt tctgcacgcc
    30481 catgctattc gttttgaaca ccccaaaacc ggcgaagaaa tggtcattac cgccccgctg
    30541 gataaaactt taaaaggcgt attggcaaaa ttaagggcta attactaaat aacttaatga
    30601 gagagtaaga tagcgcaagc gtccacgctt gtgctgtaaa tcaacataga gtggtacaag
    30661 cgtggacgct tgcaccaaca aaatataagc aaaaatatgc aaatccattt caaaaatttt
    30721 caaaaaaatg accgcttgtt agatttaacc acaccgcaaa ttatggggat cttaaacttc
    30781 acgccggatt cattttccga ttcgggcaag tttttttccc tcgataaagc cttgttccaa
    30841 gcggaaaaaa tgttagctga tgggggcaag cattattgat attggcggtg aatccacccg
    30901 ccctaatgcg gcgattgtga gcttagaaca agaattagag cgtgttgtgc cggtggtgga
    30961 ggcgatccgc agccgttttg attgcttgat ttcggttgat agctccaaag cagaagtatt
    31021 caaagagtcg gcaaaagtcg gtatggatat cattaacgat attcgagcct taaccgagcc
    31081 gaatgcgttg gcagcggcag tagaattggg cttgccggtt tgtttaatgc atatgcaagg
    31141 caacccgcaa acaatgcaac aaaatccgca ctatgatgat gtgttggaag atgtggcaga
    31201 tttcttaaat caacggattt tcgagtgcat caccgcaggc attcccaaag aacacattat
    31261 tttagacccc ggttttggct ttggtaaaag cgtgaaacac aattaccaat tattgaaaca
    31321 ccttaaagcc tttgtggatt caggcttccc tgtgcttgcc ggactttccc gtaaatcaat
    31381 gattggtgcg gtgttagata aaccggtaga acaacggcta cttggctctg tagtaggggc
    31441 gttattagcc gctcaaaatg gggcgaaaat tttacgggtg cacgatgtgg cagaaaccgc
    31501 cgatgcgtta aaaatctggc aggcaatgct ggaatcagat aatgaggaaa aatgatgaca
    31561 accttagttt atggcattaa aaattgcgac acagtaaaaa aagccttgaa atggctcgaa
    31621 gatcataatc aaaacccaca actgcacgat taccgtgtgg acggtttaaa tgccgattgg
    31681 ttagtggaaa tggaagcaaa attcggttgg gaaaacttag ttaataaacg tagcaccact
    31741 tggcgaaacc ttgatgagga aattaaaaac aaccttaacc gtgagtcggc attaaaagtg
    31801 ctaaccgaac agccgaccct aattaaacgc ccgattgtga ttaaagagga tattgctttg
    31861 attggtttta atgagaaaga gtatgtggct gcgtttaatt aattttttcc cctgcttgta
    31921 gggacaggtc ctgtgcctgt ccgtagtctt taggattgtt cgggcgggca caggacccgc
    31981 ccctacagga tatatagcaa aaaattcacc caaaacaacc gcttgtaacc tatgaaaaat
    32041 gaaattattt cccttgcaca gaacctaatc cgccgtgatt ccatcagccc acaagacaaa
    32101 ggctgtcagc aagaaattgc acaacgtctt gaaaaactgg gctttaatat tgaatggttg
    32161 ccgtttggcg acaccttgaa tttatgggca acgcacggct cggaaaatgg taaaacagag
    32221 ccttgcattg tgtttgccgg gcatacagat gtggtgccgg taggcgatga aagccaatgg
    32281 gcttatccgc cgttttcggc tgagattgta gatggaatgc tttatgggcg aggggcggca
    32341 gatatgaaag gctcgctctc ggcgttagtt gtggcggcag aaactttcgt gcaacatcac
    32401 ccaaaccata agggcaaagt ggcattattg attacctccg atgaagaggc agcagccaaa
    32461 gacggtacgg taaaagtggt tgaaacctta atggctcgca atgaagcggt acattatgcg
    32521 gtagtgggcg aaccgtctag tagcaaggtg tttggcgatg tgattaaaaa cggcagacgt
    32581 ggttcaatta cggcagatct ctatatcgag ggcattcaag ggcacgttgc ctatccacat
    32641 ttggcggaaa atccggtgca tacgtcactg ggttttttaa ccgagctgac cacttatcag
    32701 tgggataacg gtaacgaatt tttcccgcct accagtttgc aaattgccaa tatcaaagcc
    32761 ggcacaggca gtaataatgt gattccgggc gagctttatg tgcagtttaa cttacgttat
    32821 tgcactgaag tgaccgatga aatcatcaaa gccaaagtag cggaaatgct cgaaaaacac
    32881 ggtttgaaat accgaataag ttggaattta tcaggcaaac cattccttgc cggcaatgga
    32941 aaattggtcg aagccgcctt acaagcggtc gaaaatgtca caaaaattac gcctcgttta
    33001 gacacaggtg gcggtacttc ggacggtcgt tttattgcat taatgggggc agaggtagtg
    33061 gaatttggac cactgaacgc cactattcac aaagtgaatg agtgtgtgag tgcggatgat
    33121 ttggcacatt gtggcgaaat ttattatcaa attttagaaa aattattggc aactgcataa
    33181 ccctaaatag gcagaatgtt atcaaattgt attctgccta ttttttatgt agctattctg
    33241 ttaaacagcg tttacactag cggcagtttt tatatttata ggtaaatgtt atgcaactct
    33301 actcttatat ctgcttgctg tttgggcttg cgatgtttat ttcgtttttt acccgaaaat
    33361 taaacgaaaa tattcaaacc actattgcaa ttacagcctc tgcccttgtc ggctcccttc
    33421 ttattcttac cttcggttct ctcggctggt ttaatgttga taaacttgcc atttccattt
    33481 ttgaacaact cgattttaaa agcttcctgt taaacggaat gctggggttc ttgctttttg
    33541 ccggttcact tgggattaaa ctaccattaa tgaaagagca acggcgggaa attgcagttt
    33601 atgccttatt ttcaacctta gtttctactt tcttgatcgg tgcgttaatt tatggcgtgg
    33661 caaggctact tgggttagag ctcggctttg tgtattgttt gctgtttggc tcactgattt
    33721 cgccaaccga cccgattgcc gtattggcaa ttatcaaaag cctgaaagcc ccaaaacgcc
    33781 tttcgatgca cgtggagggc gaatctctgt ttaatgacgg tatcggcttg gtgattttta
    33841 ccactatctt tgccgttgct tttggcggac aagaaccaaa ccttagcggt attaccggac
    33901 tgttcttgca agaagcggta ggcggtatcg tttttggctt attaaccggt tttgtggcac
    33961 ataaatttat ttccgcaacc gatgacggaa gccttgaaat tttaattacg ctaacgattc
    34021 caacagtcgg ctttgtgatt gcaaactacc tacacgtttc aggggcatta acaatggtag
    34081 ttgccggtat tatgattggc aactggactc gccgttccgg tttctccgaa cagagccaaa
    34141 aatatcttga tcacttctgg gagatgatcg accattcatt aaactacctg ttattcctgc
    34201 ttatcggctt aagtacactg ttagttgatt tcacctttat tggtggggtg ttaatgttgg
    34261 cagcaattcc aatttgtttg cttgcacgct atatcagcct gtggattcca taccaagtgt
    34321 taaaacgttt ccgtacttat aacccgtaca ccttaaaaat tatgacttgg ggcggtttac
    34381 gtggtggatt agcccttgcg atggcacttt ccgtaccggc aggggctgcg gtggtatcga
    34441 gctcagaagg caatcttgat gtacgtgatt tgattttgtt aatgacttat gcggtagtca
    34501 ctttctcgat tttagtacaa ggttcaacgg ttgaaccgat gataaaaaaa tccaagttgg
    34561 tagatccaag aaaagtggca ctcaataaat taggtgcacc tgatgatgta attccacata
    34621 tttaatagca tttataactg aataacatat cattttgcta aagattatta gccatctaga
    34681 cggctttata tttaaatacc tctcacgtta atttgttgag aggtattttt tatgttattc
    34741 acaggattat tatgtggctt tctactcggg tttgtgatgc aaagagggcg tttttgtatt
    34801 accggagcat ttcgtgatct ctatgtaaca aagaatagcc gtatgtttgt ggcactttta
    34861 attgcaatta cggtgcaatc gatcgggatt tggcttttgt atgaagccgg ctcttttagt
    34921 tctccggcgg aagatttgcc tttgctcgca gtgatcattg gggcatttct gtttggtatc
    34981 ggcattattt atgcaggcgg ttgtgctaca ggaacgtggt atcgtgccgg tgagggttta
    35041 atcggcagtt gggttgcact ggttatttat gggctgtttt ctgcttctat gcgaaccggt
    35101 gtgttagccc cacttaatca agagctaaaa agcaatgtaa ttcaacaccg cacgatttat
    35161 gaaacatttg gtatttcccc ttgggtgtta gtgtttatcc tgagtgtaat tacattggca
    35221 ttatccgccc acagcattta aaaggttaat tttttaagga gtaataaaga tgaacgtacg
    35281 tttacctgcc tcagggcttg tttgcccgtt tccattagtc gaagccaaag cggcgatggc
    35341 aaaattgaat aaaggcgata gcttaacgat tgaatttgac tgtactcaag caaccgaagc
    35401 cattccaaat tgggcggaag aggaaggcta tgaagttacc gattaccaac aacttggtga
    35461 tgccttgtgg gaaattacgg tggttaagta attagcaata aaaaagctct acttttttgt
    35521 agagcttttg ctttgagttt tgtatttact aaggattaga gtaaacccgg ttgacctaat
    35581 gctgggtctg ttgctcttgc agcaatagca tcttcaaccg tcatacctaa tgcttttgcc
    35641 acaccttcac catatgccgg atcacaggca tagcagttac gaatatgacg gtatttaatg
    35701 aagtctaatg catcgcccat acctgcagca gtattattga ataatgcttg tttttgttca
    35761 tcattcatca tattgaacaa tacacgtggt tggctgaagt agtcagcatc gtcttcacga
    35821 tagttccagt gggctgcatc accattaatt ttcagtggtg gctctgcata ttgagcttgt
    35881 tcttgccatt tgccgaagct gtttggttcg tagtgaatgg tactaccgta gttaccgtcc
    35941 acacgacctt gaccgtcacg agcgttgcta tgaaccgggc aacgtggagc gtttacaggg
    36001 atttggtggt ggttcacacc taaacggtag cgttgagcat ccgcatagtt gaataaacga
    36061 gcttgtaaca tacggtctgg agacacgctg atgcccggca ctaagttact tggtgcgaat
    36121 gcagattgtt ccacatcagc aaagaagttt tcagggttac gatttaattc aaactcaccc
    36181 acttcaatta acggatagtc tgatttcggc cataccttag ttaaatcgaa cgggtggtat
    36241 ggtactttgt ctgcatcagt ttcaggcata atttgaacaa acattttcca tttcgggaaa
    36301 tcgccacgct caatcgcttc gtataaatca cgttggtgac tttcacgatc gttagcgata
    36361 atagcggctg cttcttcgtt agttaagttt ttaatgcctt gttgtgtatg gaaatggaat
    36421 ttcacccaga aacgctcatt agctgcattg atgaagctat aagtatgtga gccataaccg
    36481 tgcatatgac gatatgaagc cggaatacca cgttcactca ttacaatagt cacttggtga
    36541 aatgcttctg gtaataatgt ccagaaatcc cagttgttag ttgcagaacg catattcgtg
    36601 cgtgggtcac gtttaaccgc tttgtttaaa tccgggaatt tacgtgggtc acgtaagaag
    36661 aacacagggg tgttgttacc caccatatcc cagttacctt cttcggtata gaattttaat
    36721 gcgaaaccac gaatatcacg ctcagcatct gccgcaccac gttcacctgc aacggtggtg
    36781 aaacgagcaa acatttcagt ttttttaccg acttggctaa aaattgccgc acgagtgtat
    36841 ttagtgatgt cgttagttac agtgaaagta ccgaacgcac cggaaccttt agcgtgcata
    36901 cgacgctcag gaatgacttc acgcacgaag ttcgctaatt tttcatttaa ccataaatct
    36961 tgcgctaata atggaccacg tggacccgct gttaagctgt tttggttatc aacaacaggt
    37021 gcaccgttgt tcattgtcaa atgtgtaaca ggacatttag acataataga atcctcataa
    37081 attagaaata agataggtaa ttaatccgaa gagaattata ggtgttgtag attttttctc
    37141 aatctatcaa tttgataatt aatgactatt aaatattaat tttaaatagt tgattttaat
    37201 tgtcaagtat tctgagaaag atgataagcg gtcatttttc cactattttt tgcagtatgt
    37261 aggtgtaaaa attaacggcc gagaag
//
LOCUS       DANLXO010000012        35012 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.012, whole genome shotgun sequence.
ACCESSION   DANLXO010000012 DANLXO010000000
VERSION     DANLXO010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 35012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35012
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.012"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            191..667
                     /locus_tag="PXD69_000509"
     CDS             191..667
                     /locus_tag="PXD69_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282741.1"
                     /translation="MELGKTTETDVKEMYNLEPEGVNKYSKGNQYFIDPTQLDLEDLK
                     STLIIFDEKGVLVFVGSEFNSISSIEDSKNRYKKFDYLYKILASKYKLVKKERPFVGD
                     QYAKFKDGNSEIELSEPHMGGFKINLTYAKKEFLDAFQKIQSEDKKQKTKDEASSL"
     gene            complement(988..2121)
                     /locus_tag="PXD69_000510"
     CDS             complement(988..2121)
                     /locus_tag="PXD69_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis PLP-dependent protein"
                     /protein_id="HDL6282742.1"
                     /translation="MTKFNNIETTLVQIGNRTDPRTGAVAMPIILSTAYGRDGLGEST
                     GWDYTRTKNPTRAVLEQGIADLEGGDAGFAMASGMAAIQLVMSLFKAPDEWIISSDVY
                     GGSYRLFDFSHKNHGTLKPVYVNTADLAAIEAAITPNTKAIFVETPSNPLMEECDVAA
                     IAKIAKKHNLMLIVDNTFLTPALFRPIEHGADIVIHSATKYLSGHNDVLAGLIVAKDS
                     DATKVNGQNLTERLFYFQNCAGAVLSPFDSYLAVRGMKTLALRMERHQSNATELAKFL
                     AEQPEIDSVLYSGKSGMLSFRLQKEEWVAKFLKAIKLITFAESLGGAESFITYPATQT
                     HMDIPEAERITRGITNNLLRFSVGLEHVEDIKADLLQAFKQLK"
     gene            complement(2138..2950)
                     /gene="dapB"
                     /locus_tag="PXD69_000511"
     CDS             complement(2138..2950)
                     /gene="dapB"
                     /locus_tag="PXD69_000511"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDL6282743.1"
                     /translation="MTLKIGIVGAGGRMGRQLIQAVHNAQGVELGSAFERKGSSLVGS
                     DAGEVAGVGTLGVVISDDVAQNVAGFDLLIDFTRPEGTLEHLDICVAHHKQMVIGTTG
                     FDDAGKAAIKAASEKIGIVFASNYSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHK
                     VDAPSGTALSMGEHIAKTLGRDLKTHGVFERNGITGERKRDEIGFATIRAGDVVGEHS
                     VWFADEGERVEIAHKASSRMTFANGAVRAAKWLNGKQNGLFDMTDVLDLNNL"
     gene            complement(3001..3378)
                     /locus_tag="PXD69_000512"
     CDS             complement(3001..3378)
                     /locus_tag="PXD69_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282744.1"
                     /translation="MGIKVLFGTKISAELQYLPEKDLVKILQFKQHVEIYGLENLAGR
                     NKSSDDVPTNDPYWAEKVAKAQKYSLWHYHIGIPEYDTSQGFGNYTSEYILHYVKGEN
                     FIQIVDFTSHPPFKLPSESYLQN"
     gene            complement(3368..3841)
                     /locus_tag="PXD69_000513"
     CDS             complement(3368..3841)
                     /locus_tag="PXD69_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282745.1"
                     /translation="MMKNLPLSMADTLAVIYPAFDFAADDKPATEQQISLLNFRITMA
                     NQLLIACIETIEKNPNFWAEIDLNDFKKYLNQNKVVIFDTQQYFTDGSRTMAILDNMK
                     SNIRKIEQQLSQATAFNFDLERMKERLNDTFHEVPKDITNVNEFRNWLKGVANGH"
     gene            complement(3909..4997)
                     /gene="rlmM"
                     /locus_tag="PXD69_000514"
     CDS             complement(3909..4997)
                     /gene="rlmM"
                     /locus_tag="PXD69_000514"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HDL6282746.1"
                     /translation="MFNKLALYCRAGFEKEVAGEITDKAAQQGIFGFANLKENSGYVI
                     FECYQAGEADRLAQALKFEQLIFVRQMLVVGDLLQNLSENDRISPILAQYAELNPRQS
                     SDVFVETPDTNEAKELLTFCRKFTVPLRSALKKQGWLGKSENMQGSVSLHILFTRPGA
                     CYVGYAYNHNKSPFFMGIPRLKFPAEAPSRSTLKLEEAILTFIPQAEEKKRFNDTMVG
                     VDLGACPGGWTYQLVKRGVFVYAVDHGKMAASLHETGRIEHCPEDGFKFQPPKRKQID
                     WLVCDMVEQPIRISKLIAKWLTNGWCRETIFNLKLPMKKRYQEVQLCLNFLEEELTKH
                     GFWFKMQAKHLYHDREEITVHIAVMGQK"
     gene            complement(4997..5389)
                     /locus_tag="PXD69_000515"
     CDS             complement(4997..5389)
                     /locus_tag="PXD69_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDL6282747.1"
                     /translation="MKNKFVAIAAFSGLFTVAFGAIASHALSAQLSPKALGWIETGIK
                     YQMFHTLAILALGLFQIANFGQNPPVCRAKAFNIIGSNWALGILLFSGNLYLLALNVP
                     TIHWLTPIGGLCFMLGWIALIYISVRKA"
     gene            complement(5496..6897)
                     /locus_tag="PXD69_000516"
                     /pseudo
     CDS             complement(5496..6897)
                     /locus_tag="PXD69_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252330.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
     gene            complement(7052..9409)
                     /locus_tag="PXD69_000517"
     CDS             complement(7052..9409)
                     /locus_tag="PXD69_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDL6282748.1"
                     /translation="MNTALEKGKFVFLDKPKNTITTAAHWGALNVTVENGKVVKSEGS
                     LAKNHQNELQDVVADQLYSPVRVKYPMVRKGYLEGNKDTTLRGRDKWVRISWDKAFEL
                     VSGEIQRVREQYGSESIFGGSYGWYSSGSLHASRTLLQRYLNVTGGFTNTKGDYSTGA
                     VQVIMPYVLGNIEVYAQQTSWHTIVESTELLVIWSSNPLNTLRIAWTSAEPEGIDYLA
                     KLKASGKRIICIDPVKSETCQFLEAEWLPINTGTDVALILGIAHTLITENKHDHDFLT
                     KYTVGFEQFADYVLGKADNLPKTAEWASQICDIPEEVIKTLANDFVTHRTMLMSGWGL
                     QRLQHGEQSHWALVTLAAMLGQIGLPGGGFGLNYRYSTNGLNVNSGVRLGAINAGKPN
                     PDMPFFPVSRIADALLKPNQPYDYNGQTLHYPNIKLVYWAGGNPFAHHPDTNYLVKAW
                     QQPETMIVNECYWTPTARMADIVLPATTSYERNDLTVAGDYVAKHIIPMKQVVEPQFE
                     AKNDYDIFAELAKRAGKEQAFTEGKSEMEWLKEFYQVAFEAGEKANTPLLDFEAFWAE
                     NKVLSFEAEHQNNTFVRYQDYRTDPIKHKLATPSGKIEIFSETIAKMNYEDCKGHPTW
                     FEHHEYSGKTNEAEPLALVTPHIKYRLHSQLAYSSLRQYYEVNGREPMLIHTKDAADR
                     GITSGDIVRIFNKRGQVLAGAVVTDGIIQGTVALYEGGWYDPQDLGKTDTPLCKNGNP
                     NVLTRNEGSSKLGQGNAPNTTTVQVEKYVGDAPEVTVFKAPFFSE"
     gene            complement(9545..12151)
                     /gene="acnB"
                     /locus_tag="PXD69_000518"
     CDS             complement(9545..12151)
                     /gene="acnB"
                     /locus_tag="PXD69_000518"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDL6282749.1"
                     /translation="MENFIENYQQQVDERAALGVVPQPLSAEQTAQLVELLKNPPAEQ
                     AVFLLDLFTNRIPAGVDEAAYVKAAFLADITKGVATSPLISPAHAVKLLGTMQGGYNI
                     ETLLSALDNPELAPIAVEALSKTLLMFDNFHDVKERADQGNPFAQQVLESWANADWFT
                     SRPKLAEKLTVTVFKVTGETNTDDLSPAQDAWSRPDIPLHALAMLKNERDGIFPDENG
                     HTGPIKQLEALKEKGFPLAYVGDVVGTGSSRKSATNSVLWFMGEDIPYIPNKRAGGVV
                     LGGKIAPIFFNTLEDAGSLPIEVDVTNLNMGDVIDIYPYAGKICKHNSDEVLAEFELK
                     TEVLLDEVRAGGRIPLIIGRGLTHKARVALGLPESDVFIKPQSVSESNKGYTLAQKMV
                     GRACGVEGVRPGQYCEPRMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAA
                     YPKPVDVITHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIG
                     ISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGTMQPGITLRDLVHAIPYYAIQQGLL
                     TVEKKGKKNIFSGRILEIEGLEDLKIEQAFELSDASAERSAAACTIKLNKEPIIEYLN
                     SNITLLKWMIAEGYDDKRTLERRIANMQAWLDNPELLEADENAEYAAVIEINLDEIKE
                     PIVCVPNDPDDARLLSQVQGDKIDEVFIGSCMTNIGHFRAAGKLLSQAQGELPTKLWI
                     APPTKMDAGLLTEEGYYSIYGKSGARVEMPGCSLCMGNQARVANNANVVSTSTRNFPN
                     RLGQGANVYLASAELAAVSALLGKLPTPQEYLDYMNNLQKDKDDIYRYMNFDQINSYV
                     KKADNVIVQVAV"
     gene            complement(12171..13418)
                     /gene="icd"
                     /locus_tag="PXD69_000519"
     CDS             complement(12171..13418)
                     /gene="icd"
                     /locus_tag="PXD69_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDL6282750.1"
                     /translation="MQTQVQIPQGETIQLNQDGSLQVPDNPIIPFIEGDGIGVDVTPA
                     MKAVLDAAVEKAYQGKRKIAWMEIYAGEKANKLYGENTWLPDETLELIRQYHVAIKGP
                     LMTPVGGGIRSLNVAMRQGLDLYNCLRPIRYYDGTPSPVKHPELVDMVIFRENSEDIY
                     AGVEWVAGSPEANKVIEFLQQEMGVKKIRFTEDCGIGIKPVSKQGTQRLVRAALQYVI
                     DNNRKSLTLVHKGNIMKFTEGAFKEWGYQVAEEFGAKLIDKGPWMSLTNPKTGEEIII
                     KDSIADAFLQEILLHPTEYDVIATLNLNGDYISDALAAQVGGIGISPGANIGFEAAIF
                     EATHGTAPKIAGQNKGNPGSLILSGEMMLRHLGWVEAADLVVKAVSKTIANKTVTFDF
                     AEMLEGVTLRSTSEFAQDIIANM"
     gene            13652..14932
                     /locus_tag="PXD69_000520"
     CDS             13652..14932
                     /locus_tag="PXD69_000520"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005762304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDL6282751.1"
                     /translation="MSKATLTLETGEKLELNMQKGTLGYQTIDIQPFLKHKLFAYDPG
                     LVSTAVCRSNITYVDGDEGVLLYRGYPIDQLAKHSDYLEVGYMLLFGERPTKEEYKDF
                     VQLIKKHTLVHEQLTKFFSGFRRDSHPMAVMCGVSGALAAFYHDAIDVNNQAHRELTA
                     IRLLAKIPTLAAMCYKYSIGQPFMFPQNHLSYAGNFLYMMFATPCEPYEVNPVLERAL
                     DRIFILHADHEQNASTSTVRTAASSGANPFACIAAGIASLWGPAHGGANEACINMLKE
                     IGTVDRIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKVMRETCHEVLKELNIDNPL
                     FEVALELERIALSDPYFIEHKLYPNVDFYSGIVLKAIGIPTSMFTVMFALARTVGWIA
                     HWKEMYLQGNIKIVRPRQIYTGHTKRDFEPMDKS"
     gene            complement(15005..16234)
                     /locus_tag="PXD69_000521"
     CDS             complement(15005..16234)
                     /locus_tag="PXD69_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282752.1"
                     /translation="MFQAEPKNGKVTVEVLKQYLIDELKIDEEEIAIVIGNQHELDNI
                     DLFNPQCKINYIITVEALKEGWDCPFAYIFCSVQNVSSSKEAEQLLGRVLRMPYAKHR
                     QIEDLNRAYAPLSSKSFGETARNLQDKLIGMGFEALEVAEMLRIPQQENWIGNEGDLF
                     YTPTTVLALTQLPEMSDLSEAKRSQLKITEQEGHILVQVKGNLSEKLEKALIRTATGK
                     KKEQIEQQLQIHQNRVEILSSPAEKGEIFKVIPQLCMNIQGEFDLADSQVLLDYQSWN
                     LLDYPAKLDGFRLQENSQSFEIDVEDKRVSYHFNQQQLSFSDDWLRNPVKRGFSLPLA
                     HQNFYPDFIVELIDGRILIVEYKGEQLKSNEDSKEKALIGNLWEKLSQGKGLFIMAVK
                     SDENGQDVRTQLLNKLA"
     gene            complement(16201..17190)
                     /locus_tag="PXD69_000522"
     CDS             complement(16201..17190)
                     /locus_tag="PXD69_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL6282753.1"
                     /translation="MKLKNYQNEALNRVSHYFSACLQSDAKTAFSQIQPEYSYKIPSE
                     HSNLRDVPYVCVRIPTGGGKTLLASHSIARIAKQYLDCDFPVTLWPVPSRTIKTQTTE
                     ALKNPQHPYRAVLDKTFNREVMVIESEDFDLLRPQDFGNKAIVIVSTIQNFRVENQDG
                     RKIYAFNEKLTAHFERLLPHIQANLEKISTTDLQENGLTSKQTGKIKCSFANLLRAYQ
                     PLVIVDEAHNARTSLSFDVLSQLSPSAILEFTATPNTDRKAGSNVLYHVSASHLKAEE
                     MIKLPIVLTEHHNWQQAIDGAVINRGALAQKAQYESEYVRPIYCFKLSRKTAK"
     gene            complement(17206..17724)
                     /locus_tag="PXD69_000523"
     CDS             complement(17206..17724)
                     /locus_tag="PXD69_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6282754.1"
                     /translation="MNRRYIGIEIGEHAKTHVVPRLKKVIEGEQGGISKAVNWQGGGS
                     FRFCELGEEVFDAFGSLNPNIRFDDLAAHIWYLENHFPLQKNSEKSPLVGTFNGKAYY
                     LLYNGILGDKRPQSGNVLTRKLMAELPYFAEFIQQGMDIVVYGEACRLGEVQLAEKKI
                     TFKQIPYDVMSR"
     gene            complement(17734..17805)
                     /locus_tag="PXD69_000524"
                     /pseudo
     CDS             complement(17734..17805)
                     /locus_tag="PXD69_000524"
                     /inference="COORDINATES: protein motif:HMM:NF013704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(17812..18690)
                     /locus_tag="PXD69_000525"
     CDS             complement(17812..18690)
                     /locus_tag="PXD69_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016851985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6282755.1"
                     /translation="MIQGDNLSALKSLLPFYAGQVKCIFIDPPYNTKSAFTHYDDNLE
                     HSIWLSMMYPRLEILRELLAEDGSIWITLDDNESHYLKIMLDEIFGRKNFISNLIWEK
                     KRKPSFLGKVGKVTDNLFCYAKNKNELNELNDLTYLETSGDETYPLYNAGNSREILVF
                     PPRSIKFKKHSDGLYKPTIFSKKTSSITLISELIIEDQWNKNTVEIEGEWRYSQKSID
                     EQLKNGDYYIIKSLDFRPRRVFERSAEKKKIHNLISRAHYDMATNEDSASEHLELFGE
                     DIAEDSFDYPKPEKLI"
     gene            complement(18690..18893)
                     /locus_tag="PXD69_000526"
     CDS             complement(18690..18893)
                     /locus_tag="PXD69_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase N-4/N-6"
                     /protein_id="HDL6282756.1"
                     /translation="MTTLTWYGKEEAVKKAKQTPYCLLRELPDFSHNIARQPTADSRQ
                     PTADSRQPTAQLLLKPYLKSSKI"
     gene            complement(19034..21520)
                     /gene="torA"
                     /locus_tag="PXD69_000527"
     CDS             complement(19034..21520)
                     /gene="torA"
                     /locus_tag="PXD69_000527"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL6282757.1"
                     /translation="MKKQDNIDVSRRGFLKNSSLSLAAGAGLASGTTGVVGALASTSA
                     KAAEMKTVVTAAHWGPLGVVVENGKVVKSDSVFEISVPNELQHVVADQVHGETRVKYP
                     MVRKGYLEGNKDTTLRGRDEWVRVSWDKAFELVANEMKRVREAHGANAIFGGSYGWYS
                     SGALHASRTLLQRYLNVTGGFVGVKGDYSTGAAQVIMPHVLGTIEVYEQQTSWEVILE
                     SSDIVVLWSANPLNTLRIAWTSTDQQGIEYFKKLKESGKRIICIDPVKSESCEFLGAE
                     WVPVNTGTDVALMLGMAHTLVAEGKHDQAFLKKYTTGFEKFEEYLLGKTDNQPKDAKW
                     ASQICGVPEETIKKLATDFQSKRTMLMAGWGIQRQRHGEQGHWMLVTLAAMLGQIGLP
                     GGGFGLSYHYSNGGVPSATGGILGSITANPAVEAGAKTWLDETSKSSFPVARISDALL
                     NPGKTIDYNGTQITYPDIKIVYWAGGNPFTHHQDTNTLVKAWQKPDTIIVNECHWTPT
                     ARMSDIVLPATTSYERNDLTMSGDYSMMNIFPMKQVVEPQFEAKNDYDIFAELAKRAG
                     KEAEFTEGKSEMDWLQSFYQTAFEAARKNRVIMPKFEKFWQENKPLSFKASDKAKKWV
                     RYEEFRNDPLLNPLGTPSGKIEIFSEVIAKMNYDDCKGHPTWMEHEEYSGKTTAEEPL
                     ALVTPHSKWRLHSQLAYSSLRKQYAVNDREPVLIHTEDAAARGITSGDIVRIFNKRGQ
                     VLAGAVVTDGIIKGTLALHEGAWYDPLDLGTSEQPLCKNGNPNVLTRDEGTSKLAQGN
                     SPNTATVQVEKFTGQAPEVTVFKEPKYTQG"
     regulatory      complement(21539..21735)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            complement(21739..22854)
                     /locus_tag="PXD69_000528"
     CDS             complement(21739..22854)
                     /locus_tag="PXD69_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL6282758.1"
                     /translation="MAKMKKIAVFVGIMALGAAVLGGTQYAMKATSSTEFCVSCHSMT
                     HPQAEWEGSVHFSNRKGIRAECSDCHLPQDGLHYVKAKIIALKDVWHTVVTNKLPDQE
                     AYEAHRLEMAQRVWAEMKENDSMTCKSCHSFDAMVLSEQTEAAQKMHKLAQETNQTCI
                     DCHKGIAHFMPDVPVDNAAAMGELAKHGAEFSTNDKTLYTLAMTPVQLAQGGEIRLLP
                     YAELHQWTAEGEQVKATVNGWQQEGAESVVYMDLGKRIMVALLPDDAQSKVNVTKTVF
                     DNVTNSNWKEINFEITAPKNAVTANITALNHFGDNLNQTHCSGCHAPIGAEHYTANQW
                     IGVVNSMKDRTSMSADDVRAVTIYLQRNAKDVAGSSH"
     gene            complement(22996..24747)
                     /locus_tag="PXD69_000529"
     CDS             complement(22996..24747)
                     /locus_tag="PXD69_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6282759.1"
                     /translation="MDKRSRWSCLVNEQGEISEWEDKAGADYFAELPQICHYAQALLY
                     SDKNSLQFYYSSNHQWLKISLERHQSFVLTQAEHTDLPYGLSKREIELLTLISSGLSN
                     EDIANELCISKRTVDKHIENIFAKTHTKSRTLLAVFAITEHLICLPTPGKLTQSILAS
                     FNIEQLALQIIAKKQPLVTASTRHEPPIFTINHHHSRPIIIGVPYVEQGIGQIDTREL
                     LNGTQLAVETINQQGGIHGREVQVATAGFYVKDKASILQAYHHLFDQEVDAISTAYAC
                     YLPEVHELIATKGIPYLHIATHSGSNKLAQNLPNQRIENMFQVCASDVTYGLGISHFL
                     QYYRYHYAPWLQNKTVMVVTVSWQKVDIGIESLTLSLREQGWNVDYLELTQEQDNYAT
                     LMAQVHNLAPSIIVFASYFAEDIVQFYQTFIRNPTNAIIYSIYAPSAFLPHEKLCEGV
                     LWSTNSGLSENYLGRQFSQHYERFFGKSPTYSQASIAYDQANILANAWKQSVSPRHFK
                     AVSNAIRLQPHYGVNGTYYFNTDSQIGLTYAETHDLSISLPQLVYQIQQGQSRVIAPE
                     LFANAQFILPPWFSEKA"
     regulatory      24911..25067
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            25056..26081
                     /gene="moaA"
                     /locus_tag="PXD69_000530"
     CDS             25056..26081
                     /gene="moaA"
                     /locus_tag="PXD69_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDL6282760.1"
                     /translation="MQSIIPIKNVGDDVVSGLVDRFQRQYTYLRLSITDVCNFRCNYC
                     LPDGYKPPSHKQTFLSVDEIQRVAKAFANLGTEKIRITGGEPTLRKDFLEIAHTISQT
                     PGIRKVALTTNGYRLERDVELWQQAGITDINVSVDSLDPRQFQLITGENKLQSILKGI
                     DKAFEIGYPKIKVNAVLMKQYTAPELDKFLTWIKDKPIQMRFIELMETGEMDSFFQAQ
                     HLSGQSVMTRLLQEGWQLQPKAMSDGPAKVLSHPDFKGEIGLIMPYEKNFCASCNRLR
                     VSALGKLHLCLFGEEGIDIRDLLASDEQQLQLETRLKSSLQGKREHHYLHIGDSGVRN
                     NLASIGG"
     gene            26582..27058
                     /gene="moaC"
                     /locus_tag="PXD69_000531"
     CDS             26582..27058
                     /gene="moaC"
                     /locus_tag="PXD69_000531"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDL6282761.1"
                     /translation="MTTFTHINQNGEANMVDVSMKQETVRIARAEAFVRMNAETLQMI
                     VSGNHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLEALPESNQVRIESL
                     CKLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMIIENVRLLSKSGGKSGDFKVD"
     gene            27051..27296
                     /gene="moaD"
                     /locus_tag="PXD69_000532"
     CDS             27051..27296
                     /gene="moaD"
                     /locus_tag="PXD69_000532"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005631889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HDL6282762.1"
                     /translation="MIKILFFAQVRELVATDRLDVEPTFTTAEALREHLSQQGKKWQL
                     ALEKGKLLVAINQTICPLETEIKDGDEVAFFPPVTGG"
     gene            27298..27753
                     /gene="moaE"
                     /locus_tag="PXD69_000533"
     CDS             27298..27753
                     /gene="moaE"
                     /locus_tag="PXD69_000533"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HDL6282763.1"
                     /translation="MFETLIEVQEAEFDQNRIYQWLSEQHSVGAATLFIGKVREMNLG
                     DNVSGLFLEHYPAMTKKALQEIVAQARTRWDLQRVAVIHRIGQLHTGDEIVLVGVSSA
                     HRGDAYHANEFIMDYLKTKAPFWKREQTQAGERWIEGRESDQQAAKKWQ"
     gene            27786..28268
                     /gene="ybeY"
                     /locus_tag="PXD69_000534"
     CDS             27786..28268
                     /gene="ybeY"
                     /locus_tag="PXD69_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDL6282764.1"
                     /translation="MENLYIDLQIACENTENLPSEQQFYTWVQKALAVEAKTDDFPES
                     EITIRIVDEAESHELNLTYRGKDKPTNVLSFPFEAPEGIEMPLLGDLVICRQVMEKEA
                     EEQGISAESHWAHLAIHGTLHLLGYDHIEEDEAVEMESLETEIMQSLGYEDPYLSEKI
                     "
     gene            28346..30364
                     /locus_tag="PXD69_000535"
     CDS             28346..30364
                     /locus_tag="PXD69_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HDL6282765.1"
                     /translation="MRTIAIITSPNNADFIQQGYFYIPENHQLKAIPFSNAKTILGQE
                     YPFAIYTMQAENGVNFNLDAFAILAGTIQENGTLFLLCPQWDNLENELDFDALRWNEN
                     QAIACPNFYQHFKQLVAKFGFEVRTNLPKLPATSGQIPSKIYQLTQEQQNILQNLPLD
                     PADIHLITAPRGRGKSTLAGRLAKALPAQNKVLITARSYSALPSFWRSAEQKIPFFAP
                     DNLIEQVKSKNISPNQWLFIDEAASLPLPILHTLCAYFEKVVLTTTTQNYEGTGRGFE
                     LKFPVMLDKPFKHWTLSQPLRWSENDPLEAFVTELLLLSEEKSPLFSKEGKGEIYSLR
                     SHYVPLLKQRSNAKRLWQKQLSKNISYSNKHLQEKIAFYHLLANAHYKTTPTDLRRLF
                     DGENQLLFSQQENEQLIGGIWAMQEGGLDEKLTQAIWLGERRPQGSLVAQYLCFQGNL
                     PQACKLHSIRISRIAVLPEKQNQGVGKRLISQFILQNSVEKRPLDFISVSFGLTTPLH
                     AFWQSCGFQLVQITPNKEASSGYQSAMMIYPISEQGKLFAQQATQAFARDFALQPFFT
                     EICEELQNFEQFRPLATHNLDERDWKNLTAFAHGKRTFSAAYVSLKRLYLSDKARFSE
                     LDIFERKGQKISKMEVENYRKLVLQNLNNKSFKIIYRFYYIFLCFCSC"
     gene            30429..31619
                     /locus_tag="PXD69_000536"
     CDS             30429..31619
                     /locus_tag="PXD69_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000462687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HDL6282766.1"
                     /translation="MFSHIQAAPADSILGLGEAFKADSREGKINLGIGVYMTDEGKTP
                     IVKAVKEAEKRLLETENSKNYLTIDGVQAFNAATQALLFGEGAEVITSGRAKTAQSLG
                     GTGALRIAAEFIKRHTNAKNVWISTPTWPNHNGIFDAVGVNVKGYRYYNKETNGLDWE
                     NLIADLSQAEAGDVVLLHGCCHNPTGIDPTPAQWEQLAALSAEKGWLPLFDFAYQGFA
                     NGLEEDAYGLRAFVKNNRELLVASSFSKNFGLYNERVGAFTLIADNADDANRAFTQIK
                     SIIRVLYSNPSAHGASAVAVALADPDLKAQWIAELDEMRNRIKEMRSQLVQKLKEKGA
                     NKDFSFITEQNGMFSFSGLTPEQVDKLKDEFAIYAVRSGRINVAGITSKNIDALADAI
                     VKVL"
     gene            complement(31726..33027)
                     /gene="folC"
                     /locus_tag="PXD69_000537"
     CDS             complement(31726..33027)
                     /gene="folC"
                     /locus_tag="PXD69_000537"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDL6282767.1"
                     /translation="MNTLSIPKATDSLETWLSYLEQAHSKPIDMGLDRIRKVATELDL
                     LKPAPYVITVAGTNGKGSTCRLLEVTLLKAGFRVGVYSSPHLIHYNERVRINGEVLPD
                     ADHVQAFAKINAKKTASLTYFEFSTLSAFELFKQNQLDIVILEVGLGGRLDATNIIDP
                     SLAVIISIDIDHVAFLGDNREDIGREKAGIFRENIPVVIGEPDCPHSIKQIADSLNCH
                     AFYRGKDWQFEIKNNLFHWYSEEKSFTDLPIPLIPIPNAGTALAVLMQLPFEIDEKII
                     RQALNEAQMTGRFQTLTDTDFTHFSQPKPAAKVIIDVGHNPHAARYLADKLRELKQPN
                     QKIYAVFSALEDKDLSGIVEPLANIIDEWHCAGLDCWRGQTGEAVLAKLVNVLPNSTA
                     CSYENVAQASRVLFETANENDIVLVFGSFHTVADFMLWLET"
     gene            complement(33037..33933)
                     /gene="accD"
                     /locus_tag="PXD69_000538"
     CDS             complement(33037..33933)
                     /gene="accD"
                     /locus_tag="PXD69_000538"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HDL6282768.1"
                     /translation="MSWLDRILGRDSSSSSNAKSKVPEGVWTKCTSCEQVLYSEELQR
                     NQQVCPKCDHHMRIDARTRLLNLLDKDSAVEIAADLEPEDVLKFKDLKKYKDRLTAAQ
                     KQTGEKDSFIVLAGTLHNMPVVTASFNFEFMGGSMGSVVGAKFVKAAEKALAEKIPFI
                     CFSASGGARMQEALFSLMQMAKTSAILAKMKEQGVPFISVLTDPTLGGVSASLAMLGD
                     VNIAEPKALIGFAGPRVIEQTVREKLPEGFQRAEFLLEHGAVDMIVHRKEMRDTLSRL
                     CAKLTNQPTPFKVAELVVENAE"
     gene            34242..35012
                     /gene="mazG"
                     /locus_tag="PXD69_000539"
                     /pseudo
     CDS             34242..35012
                     /gene="mazG"
                     /locus_tag="PXD69_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600778.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
BASE COUNT        10239 a         7550 c         6850 g        10373 t
ORIGIN      
        1 atatatgaaa tctagttatg cagaatatct agaaacttta aaataacaaa aatagcatcc
       61 ccgcaagaat gaggagatgg ctatttttgt tatttatagc ttataggaaa ctcattatga
      121 aaaagatgtt aaagctacat tatttgcaac tattagtact tctgtattag ctgaaccaac
      181 cgtttttaaa atggaactag gtaaaacaac agaaacagat gtaaaagaaa tgtataacct
      241 tgaaccggag ggtgttaata aatacagcaa gggtaatcag tattttattg atccaacgca
      301 attagattta gaagatctta aatcaacgct tattatcttt gatgaaaaag gggtattagt
      361 ttttgttggt tccgagttta attctatatc ttctatcgag gattcaaaaa accggtataa
      421 aaaattcgat tatttgtaca aaatactagc aagcaaatat aaacttgtaa aaaaagaacg
      481 tccatttgta ggcgatcaat atgctaaatt taaagacggt aattcagaaa tcgaattatc
      541 agaaccacat atgggtggtt ttaaaattaa cttgacttat gcaaaaaaag aattcttaga
      601 cgcattccaa aagatacagt ctgaagataa aaaacaaaaa actaaagatg aagcatcatc
      661 gttataatta aaatttttta gtcatacatt acattagaac tttattgttc gtatgagtgt
      721 aatgtgtggc taaaaaattt gaacaaacga agcgacagcg ttagcaaaaa cttaaaatga
      781 tgtacggatt taaaaatctg ttcgtttgct tgttttataa gcaaactaat ttcgcataat
      841 tattattatg ttaaatagat agttaaaata acacatttaa ttaaatcttt tcgtgtttct
      901 ctcctccttt attaaaaaag aaaacggtca gattggtaaa atctatacct aatatgaccg
      961 cttgtgaata caaaaaaatt acttcaatta cttcaactgt ttaaaggctt gcagtaaatc
     1021 agctttaata tcttcaacgt gttctaaacc aacggaaaaa cgcagtaaat tattcgtaat
     1081 gcctcgtgta atacgttctg cttccggaat atccatatgg gtttgtgttg caggataagt
     1141 aataaaactt tctgcaccgc ctaaactttc cgcaaaggta atcaatttaa ttgccttgag
     1201 aaatttcgct acccactctt ctttttgtaa acggaaagat aacataccac ttttgcctga
     1261 atataacacg ctgtcaattt caggttgctc tgctaagaat ttagccagtt cggtggcatt
     1321 agactgatgg cgttccattc gtaatgccaa ggttttcata ccacgcacgg caaggtaaga
     1381 atcaaatggc gacagcactg caccggcaca gttttggaaa tagaataaac gctcggtcaa
     1441 attctgcccg tttactttgg tagcatcaga atctttcgca acaattaagc cggctaacac
     1501 atcattatgc cccgaaagat acttggtcgc actgtgaatc acaatatcag ctccgtgctc
     1561 aatcggacgg aataacgctg gggttaagaa cgtattatca acgatcaaca ttaaattgtg
     1621 ttttttcgca attttagcaa tggcagcaac gtcgcactcc tccatcaatg gatttgacgg
     1681 cgtttccacg aaaatcgcct tagtattcgg tgtaatagct gcttcaatcg ctgctaaatc
     1741 cgctgtatta acataaaccg gctttaatgt gccgtgattt ttgtggctaa aatcaaacaa
     1801 gcggtaagaa ccaccataaa catcgctgga aataatccat tcatcaggtg ctttaaataa
     1861 tgacattact agctgaatcg ctgccattcc agatgccatc gcaaaaccgg catcaccgcc
     1921 ttctaaatcc gcaatcccct gctctaatac agctcgagtt gggtttttgg tacgggtgta
     1981 atcccagccg gtagattcgc ctaagccatc acgcccgtaa gcagttgata agataatcgg
     2041 cattgccacc gcccctgtac gaggatcagt tctgttaccg atttgcacta atgtggtttc
     2101 aatattattg aattttgtca ttgttattat ccttcaatta cagattattt agatccaata
     2161 cgtctgtcat atcaaacaag ccattttgtt tgccatttaa ccattttgca gcacgcactg
     2221 cgccattggc aaacgtcatt cgactagagg ctttatgtgc gatttcgaca cgttcgcctt
     2281 catcagcgaa ccatacacta tgctccccta caacatcacc ggcacgaata gtagcaaagc
     2341 cgatttcatc acgtttgcgt tcgcctgtaa taccgttacg ttcaaatacg ccatgagttt
     2401 tcaagtcacg cccaagagtt ttggcaatat gttctcccat tgataaagcc gtacctgatg
     2461 gtgcatcaac tttatggcga tggtgtgcct caatcacttc aatatcacaa taatcgccca
     2521 ttacttttgc tgctttttcg agcagtttaa acaccagatt caccccaacg ctgtagtttg
     2581 aggcaaaaac gataccgatt ttttcactcg ctgctttgat tgcagcttta cctgcatcat
     2641 caaaaccggt tgtgccaatc accatttgtt tatgatgagc cacacaaata tccaaatgtt
     2701 ctagcgtgcc ttcagggcga gtaaaatcaa ttagtaaatc aaaacctgct acattttggg
     2761 cgacatcatc agaaatcacc acacctaatg taccaacccc ggctacttca ccagcatcac
     2821 tacctactaa tgatgaacct ttacgctcaa aagcagaccc taattctacg ccttgtgcat
     2881 tatggacggc ttgaattaat tgacgcccca ttcgcccacc ggcaccgacg attccaattt
     2941 ttaatgtcat atttgttctt cctttttata tttgtttttt acaagcggtt acatttttaa
     3001 ttaattttgc aaatagcttt ctgatggcaa tttaaaaggt gggtgagaag taaaatcaac
     3061 aatttgaata aagttttcac ctttcacata atgtaaaata tactcagaag tataattacc
     3121 aaatccttga ctggtatcat attctggaat gccgatatga taatgccata aagaatattt
     3181 ttgtgcttta gccaccttct ctgcccaata aggatcattc gttggcacat catcagaact
     3241 tttatttcga ccagctagat tttccaatcc ataaatttca acgtgttgtt taaactgcag
     3301 gattttgact agatcttttt caggcaaata ttgcaattcg gctgaaattt ttgtaccaaa
     3361 taaaacttta atgcccattt gcaacacctt tcaaccagtt tctaaattca ttaacattcg
     3421 ttatatcttt aggcacttcg tgaaaagtat catttaaccg ctctttcatt cgctctaagt
     3481 caaaattaaa tgcggttgct tgagagagtt gctgttcaat tttgcgaata ttggacttca
     3541 tattatccaa tatagccatt gtccttgagc catcagtaaa atactgttgg gtatcgaaaa
     3601 tcaccacctt attttgattt aggtattttt tgaaatcgtt taaatcaatt tcagcccaaa
     3661 agtttggatt tttttcgata gtttcaatac aggcaattaa taattgattt gccattgtaa
     3721 tacgaaaatt taacaatgag atttgctgct ctgttgcagg tttatcatca gctgcgaaat
     3781 caaatgccgg ataaatcact gcaagcgtgt cagccataga taagggtaaa tttttcatca
     3841 tctctcctta cggaagaagt tgtcattatc tactggatta cttaaaaaaa caacttattc
     3901 attttatgct atttttgccc catcaccgca atatgtaccg taatttcctc acggtcgtgg
     3961 tagaggtgtt tagcttgcat tttgaaccaa aacccgtgtt tcgttagctc ttcttccaag
     4021 aaattgaggc atagttgcac ttcttgataa cgttttttca tcggcagttt taggttgaaa
     4081 atcgtttctc gacaccaacc gttagtcagc cattttgcaa tgagtttcga gatacgaatc
     4141 ggctgctcta ccatatcaca aaccagccaa tcgatttgtt tacgcttagg cggttggaat
     4201 ttaaacccat cttcagggca atgctcaatt cttccggttt cgtgtaaact tgctgccatt
     4261 ttgccgtgat cgactgcata gacaaaaaca ccacgtttga ctaattgata agtccaacca
     4321 cccggacaag ccccaagatc gacccctacc atcgtatcat taaagcgttt tttctcctct
     4381 gcttgcggaa taaaagttaa aatcgcctct tctaatttaa gcgttgagcg actaggtgcc
     4441 tcagccggga attttaaacg gggaatcccc ataaaaaacg gcgatttatt atggttgtac
     4501 gcatagccca catagcaagc tcccggacga gtaaataaaa tatgcaagct cacactaccc
     4561 tgcatatttt ccgatttccc caaccaacct tgttttttca atgccgaccg taatggcaca
     4621 gtaaatttac gacagaaagt taataattct ttcgcttcgt tggtatccgg tgtttcgaca
     4681 aatacatcag aactttggcg aggattaagt tcggcatatt gggctaaaat cggcgaaatt
     4741 cgatcatttt cagacagatt ttgcaacaaa tccccaacaa ccaacatttg gcgaacaaaa
     4801 ataagctgtt caaactttaa cgcttgggct aatcgatctg cttcccctgc ttgatagcac
     4861 tcaaaaatca catagccact attttcttta aggttggcaa agccaaaaat gccctgttgt
     4921 gcagctttat ccgtgatttc gcctgctacc tctttttcaa accctgctcg gcaatataag
     4981 gctaatttat tgaacattag gcttttctca cactgatata aattaacgca atccaaccaa
     5041 gcataaagca gagaccacca ataggcgtaa gccaatgaat agtcggcaca tttaacgcca
     5101 gtaagtacag gttgccacta aaaagcagaa tgcctaacgc ccaattgctt ccgatgatgt
     5161 taaaggcttt ggctctacaa acgggtggat tttgcccaaa atttgcaatt tggaataaac
     5221 ctaaagctaa aatggcaagg gtgtgaaaca tttgatattt aatccccgtc tcaatccagc
     5281 ctaaggcttt aggcgataat tgagccgata atgcgtggct ggctatcgcc ccaaatgcca
     5341 cagtaaataa gccgctgaat gcggcaattg ctacaaattt gtttttcata agttgaagat
     5401 aggtatgatg ttagatggct tactatatca tattatcgaa accaacaagc ggtgaaattt
     5461 tgcaaaaaaa ttacaaaaaa tcaccgtttg tatgcttaat ggttcaagat aatatccaca
     5521 tcttccgatt tatcgtgaac cccaaatcta tctactaagg ttttgctggc ctcatttaat
     5581 ccgataattt ctacctcaac atcacttttt cgatatttca acacaacttt atctaacgct
     5641 gaaactgccg ttacgtccca aaagtgagcg tgggttaaat caatgtggac ttttttcagt
     5701 tctgaacggg taaaatcaaa ttgtgcgata aaatcatcag atgaggcaaa aaatacttgc
     5761 ccgataacat cataacgcaa ttcctctttc tctatagcac ttgttttaac cgccatataa
     5821 cgtccaattt tattcgcaaa gaataatgcc gagagcaaca cgccggaaaa tacaccaagg
     5881 gctaagttat gtgtataaac cacaattgca acagtgacta acatcactac attaaagccg
     5941 attgggtgcg tttttagctc ttttaaggaa tgccaattaa aggtgccgat agagaccata
     6001 atcatcactg caactaatgc agccatcgga atcactctca aaatatcgct caaaaagacc
     6061 acaaaaatca gtaataatat tggcaatgcc ctgcccttta cattcacggt ttttatcgct
     6121 gtctgtctct gtcatttcat caacaatcgt tgccgtcatt aaagattcca ataaccctac
     6181 tgcggccaag ctgaaagaat aaggcaaaat aatccataag gtgtctaaat taagcggaat
     6241 atcgggtaat aaaaacaccg gtaaggtatc gggtaattgc cccatatccc caacggtacg
     6301 aacatcaatg ccttgccata atgtgaaaag tgttaaagca ataatggtca ctaatggtga
     6361 gggaatgatt tttccaatca ccggtacata aggaaaaaga taaatgatag caagccctgc
     6421 taccaccagt gcataagtat gccaagttgt attttgtaac tcaggtagtt gtgccataaa
     6481 aattaaaatg gcaagtgcat taacaaaccc aatcactacg gctcgtgcca caaaccgcat
     6541 aagcgagccg agttttaacc aaccggcaat aatttgcaac acgcctgtta ataaggtggc
     6601 cgctagcata tattgtaaac cgtgatccct cactaagcct gctaatacca gagccattgc
     6661 accggttgct gcagaaatca tcgccggtct gccgcccaca aaactgataa ttactgcaat
     6721 acaaaatgag gcatataaac caatttgtgg atcaacccct gcaataattg aaaatgctat
     6781 ggcttctgga attaacgcca aagccaccac taaaccagag agaacatcac ctcgtacatt
     6841 tgaaaaccat tgttgtttaa ttaccgtagg cgaaaattgc tgaaataaag ttgtcattat
     6901 tacccttaaa taaaaagaaa agccgagcaa agtcggctaa aaatgaggcg agagagtagc
     6961 aaattagtga aaagtcgtca aataaacaag cggtcttctt tcgctctttt tttgcaaaaa
     7021 atagtagaaa aatgaccgct tggattaatt gctattcact aaaaaaaggg gctttaaaca
     7081 ccgtcacttc aggtgcatct cccacatatt tttccacttg aaccgtggta gtgttcggtg
     7141 cattgccctg cccgagtttt gatgaaccct cattacgggt tagcacattc gggttgccgt
     7201 ttttgcatag tggagtatct gttttgccta aatcttgcgg gtcataccaa ccaccttcgt
     7261 ataacgctac tgtgccttga atgatgccat cagtcaccac tgctcctgcc aacacctgcc
     7321 ctcgcttgtt aaaaattcgc acaatatcac cgcttgtaat gcctctgtca gcggcatctt
     7381 ttgtgtgaat tagcattggt tctctgccgt ttacctcgta atattgacgt aatgaggagt
     7441 aagcaagctg gctgtgtaaa cggtatttaa tatgcggtgt aactaatgcc aacggctcgg
     7501 cttcgttggt tttgcctgaa tattcgtgat gttcaaacca agtcgggtgt cctttacaat
     7561 cttcataatt catcttggca atggtttcgg agaaaatctc aattttgcct gatggcgttg
     7621 ccaatttgtg tttaatcgga tcagtacgat aatcttgata gcgaacgaaa gtattatttt
     7681 gatgttctgc ctcaaagctc aacactttat tttccgccca aaatgcctcg aaatccagca
     7741 atggcgtatt agctttttcc cccgcctcaa aggcaacttg gtaaaattcc ttaagccatt
     7801 ccatttcgct tttgccttcg gtaaatgctt gttctttacc ggctcgtttc gctaattcgg
     7861 caaaaatatc gtaatcattc ttcgcctcaa attgcggttc aaccacctgt ttcatcggga
     7921 taatatgttt tgctacataa tcaccggcaa cggtgagatc gtttcgctcg tagctggtgg
     7981 ttgcgggcaa tacaatatct gccattcgag cggtcggtgt ccagtaacat tcattgacga
     8041 tcatcgtttc cggctgttgc cacgctttca ctaaatagtt ggtatccggg tggtgagcaa
     8101 acggattacc ccccgcccaa tagactaatt tgatgttcgg gtaatgtaat gtttgcccgt
     8161 tgtaatcata aggctgattc ggtttgagca acgcatcggc aattcgagac accgggaaaa
     8221 acggcatatc ggggttaggt ttacctgcat tgattgcccc taaacgaaca ccggaattaa
     8281 catttagccc attggtagaa taacgataat ttaagccgaa accgccgccc ggcaagccaa
     8341 tttgcccgag catagcggca agagtcacta acgcccagtg gctttgctcc ccgtgttgca
     8401 ggcgttgcaa gccccagccg gacatcaaca ttgtgcggtg agtaacaaaa tcatttgcta
     8461 aggttttaat cacctcctcc ggaatgtcac aaatttggct cgcccactct gctgttttag
     8521 gtaaattatc tgcttttcct aacacataat cagcaaattg ctcgaaacca acagtatatt
     8581 tagttaagaa gtcgtgatcg tgcttgtttt cagtaataag ggtgtgggcg atccctaaaa
     8641 tcagtgcaac atccgtgccg gtattaatag gcaaccactc tgcctctaaa aattgacagg
     8701 tctcgctttt caccgggtcg atacaaataa tccgtttacc gcttgctttt aatttggcga
     8761 gataatcaat cccctccggt tcggcagagg tccacgcaat gcgaagtgta ttcagtggat
     8821 tagacgacca aattaccaat aattctgtgc tttctacaat tgtgtgccaa ctggtttgtt
     8881 gagcatacac ctcaatattg cctaatacat aaggcataat cacttgcacc gcaccggtgg
     8941 aataatcgcc tttagtattg gtaaagccgc ctgtgacgtt taaataacgt tgcaaaagcg
     9001 tgcgagaggc gtgcagtgaa ccactgctat accagccgta agaaccgccg aaaatggatt
     9061 cgctgccata ttgctctctt acccgttgga tttcgccgga aaccagctca aaggctttgt
     9121 cccaagagat tctcacccac ttatctcgcc ctcgcaaagt ggtgtcttta ttcccttcca
     9181 agtagccttt ccgcaccatc ggatatttca cccgaaccgg gctatagagc tgatccgcca
     9241 ccacatcttg caattcgttt tggtgatttt tcgctaaact gccctctgat ttcaccactt
     9301 ttccgttttc caccgttaca tttaatgcac cccagtgggc ggcggtggta atggtatttt
     9361 tcggtttatc caaaaagaca aacttccctt tttctaatgc tgtgttcatt taaattaatg
     9421 ccttttctgt tacaaaattg agaggaattt actggattaa gccaaaagtt gcaaccacaa
     9481 gcggttgttt ttagccaaaa atttgcaaaa caaaacccac ctaaaaaggt gggcttcaag
     9541 gaagttaaac ggcaacttga acgattacat tgtccgcttt tttcacataa ctattgattt
     9601 ggtcaaagtt catatagcgg taaatatcgt ccttatcttt ctgcaagtta ttcatatagt
     9661 ctaggtactc ttgcggtgtc ggcaatttac ccaataacgc agaaactgcg gctaattctg
     9721 ctgaggctaa atacacattt gccccttgcc ctaaacggtt cgggaagttt cgggtagagg
     9781 tagaaaccac attagcatta tttgccactc gggcttggtt acccatacag agagaacagc
     9841 ccggcatctc tacccttgct ccgcttttgc cgtaaatgct gtaatagccc tcttcggtca
     9901 gcaagcctgc gtccatttta gtcggcggag caatccataa tttagtcggc aattcgccct
     9961 gtgcttggct taacagttta cctgccgcac ggaaatgccc gatattagtc atacaagaac
    10021 caataaagac ttcatcaatt ttatcgccct gtacttgaga aagcaggcga gcatcgtcag
    10081 ggtcattcgg tacgcacaca atcggctctt tgatttcatc taagttgatc tcaatcactg
    10141 cggcatactc cgcattttcg tctgcctcta aaagctccgg attatccaac cacgcttgca
    10201 tattggcgat acggcgttct agcgtgcgtt tatcgtcata gccttccgca atcatccatt
    10261 ttaaaagcgt aatattagaa ttcagatact cgataatcgg ctctttgttg agcttgatgg
    10321 tacaggctgc agcagagcgt tcagcagaag catcagaaag ctcgaaggct tgttcgattt
    10381 tcagatcttc caacccttca atttctaaaa ttcgaccgga gaaaatattt ttcttacctt
    10441 ttttctccac cgtcagcaag ccttgctgaa tggcataata cggaatagcg tgaaccagat
    10501 cccgtaaggt aatgcccggt tgcattgtgc cggaaaaacg caccaagacc gattccggca
    10561 tatctaacgg catcacccct gttgccgcag caaaggcaac taagcccgaa ccggcaggga
    10621 atgaaatccc gattgggaaa cgggtgtggg aatcgccgcc tgtaccgaca gtatccggca
    10681 ataacatacg gtttagccaa gagtgaatca cgccatcacc cgggcgaagt gacacaccgc
    10741 cacggttcat aataaaatca ggcaaagtgt ggtgggtaat tacgtccacc ggtttcgggt
    10801 aagcggcagt atggcagaac gattgcatca caagatctgc cgagaagcct aaacaggcta
    10861 aatctttcag ctcatctctt gtcattggtc ctgtggtatc ttgtgaaccg acagacgtca
    10921 ttcgaggctc gcaatattgc cccggtcgaa cgccttctac gccacaagct cgccctacca
    10981 ttttttgagc aagggtgtag cctttgttac tctctgaaac cgactgcggt ttaataaata
    11041 catcactttc aggcaagcca agtgctactc tggctttatg ggtcaaacca cgtccgataa
    11101 tcagcggaat tcgcccgcct gcacgcactt catcaagcaa tacttcggtt tttagctcaa
    11161 attcggctaa gacttcatcg gagttgtgtt tgcaaatttt gcctgcataa gggtaaatgt
    11221 cgattacatc gcccatattc aggttggtta catccacttc gatcggtaaa gaaccggcat
    11281 cttctaatgt gttaaagaaa atcggggcaa ttttaccgcc taacaccacc ccaccggcac
    11341 gtttgtttgg aatgtaagga atatcttccc ccataaacca aagcacggag ttggttgcgg
    11401 atttacgaga agagccggtg ccgactacat caccgacata ggctaacggg aaaccttttt
    11461 cttttaatgc ttccagttgc ttaatcgggc cggtatgacc gttttcatcg gggaaaatac
    11521 cgtcacgttc atttttcagc attgctaatg cgtgaagtgg aatatcaggg cgagaccaag
    11581 cgtcttgagc cggggaaaga tcatcggtat tggtttcgcc tgtgacttta aataccgtta
    11641 ccgttaattt ttcggcaagt ttcgggcgag aggtaaacca atcggcattc gcccaagatt
    11701 ccaatacttg ttgtgcaaac ggattaccct gatctgcccg ttcttttaca tcgtggaaat
    11761 tatcaaacat caataatgtt ttagataagg cttctaccgc aatcggtgca agctcagggt
    11821 tatccaacgc agacaataag gtttcaatgt tataaccacc ttgcattgtg ccgagtaatt
    11881 tcactgcgtg agcaggcgaa atgagcggcg atgtggcaac ccctttggta atatcggcta
    11941 aaaaggcggc tttaacataa gcggcttcat caacacctgc cggaatacga ttggtaaaaa
    12001 gatccaataa aaagaccgct tgttcagccg gtgggttttt caataattca accagttgag
    12061 ccgtttgttc cgcagaaagt ggctgaggca caacacccag tgccgcacgt tcatcaacct
    12121 gttgttgata attttctata aaattttcca tcatcattcc ctctccaact ttacatattg
    12181 gcaataatgt cttgtgcaaa ttctgaggtt gagcgtagag ttaccccctc cagcatttcc
    12241 gcaaaatcaa aggtgacagt tttattggca atggttttag acaccgcttt taccactaaa
    12301 tcagccgctt caacccaacc taaatggcgt aacatcattt ccccacttaa aattaatgac
    12361 ccaggattgc ctttattttg ccctgcaatt ttaggggctg tgccgtgtgt ggcttcaaaa
    12421 atagccgctt caaacccaat attcgctccc ggtgaaatac cgattccgcc tacttgtgcg
    12481 gctaaagcat cagaaatata gtcgccgttt aggttcagtg tagcaatcac atcatattcg
    12541 gttgggtgta acaagatttc ttgtaaaaag gcatcggcaa tgctgtcttt tataatgatt
    12601 tcctcaccgg ttttcggatt agtcaagctc atccaagggc ctttatcaat taattttgcc
    12661 ccaaattctt ccgcaacttg gtagccccac tctttaaatg ctccttcggt aaatttcata
    12721 atgttacctt tatgcacaag cgtgagcgat ttacggttgt tatcaattac atattgcaat
    12781 gcagcacgca ccaagcgttg tgtgccttgc ttagaaaccg gcttaattcc gataccgcaa
    12841 tcttcggtaa agcggatttt tttcacgccc atctcttgtt gtaaaaattc gatcacttta
    12901 ttggcttcag gcgaaccggc aacccattct acaccggcat aaatatcttc cgagttttca
    12961 cggaaaatca ccatatccac cagctcaggg tgtttaaccg ggcttggcgt accgtcataa
    13021 taacgaattg ggcgtaagca gttgtataaa tctaatcctt gacgcatcgc cacatttaaa
    13081 gaacgaatac cgccacccac cggtgtcatt aaaggacctt taatcgccac gtgatattgg
    13141 cggataagct ctaaggtttc atccggcaac caagtgttct caccatataa tttattcgcc
    13201 ttttcgcctg cgtaaatttc catccaagca atttttcgct tgccttgata ggctttttct
    13261 accgccgcat ctagcactgc tttcattgca ggagtaacat caacaccgat gccgtcacct
    13321 tcaataaatg gaataatcgg attatccgga acttgtaaag aaccgtcttg gttcagttga
    13381 atagtttcgc cttgtggaat ttggacttgt gtttgcattg attttacccc cgtaatgacg
    13441 aaaaagtagt gacgaaaaat gaatgttgac aatcagccaa caatggatta actataaaca
    13501 gtaaatttct aaatgtaaat aaagcaaaat gggctgagag agaatttgtg atctaacgca
    13561 catttatgta aataaaatgt aaaaaatcgt tgtgattctt ttggaaatca tctagtttat
    13621 cttataaatc tcaaataaat aggagtaagc tatgtcaaaa gcaacattaa cactcgaaac
    13681 aggtgaaaaa cttgaactca atatgcaaaa aggaacctta gggtatcaaa cgattgatat
    13741 tcagcctttc ttaaagcata agttatttgc ttatgatccc ggattggttt cgaccgctgt
    13801 atgccgatcc aatatcactt atgttgatgg cgatgaaggg gttttactct atcgaggcta
    13861 cccgattgac caattagcca aacattctga ttacttagaa gtcggttata tgctgttatt
    13921 cggcgaacgc cctaccaaag aagaatacaa agacttcgtt caactcatca aaaaacacac
    13981 tcttgtacac gaacaactaa ccaaattctt ctccggtttc cgccgagatt cgcacccaat
    14041 ggcggtgatg tgtggggtaa gtggagcttt ggctgccttc taccacgacg ccattgatgt
    14101 aaacaaccaa gcccaccgtg aattaaccgc cattcgtttg ttagccaaaa tcccaaccct
    14161 tgcggcgatg tgttataaat actctatcgg tcagccgttt atgttcccac aaaaccactt
    14221 atcttacgcc ggcaacttct tatatatgat gtttgccact ccttgtgaac cgtacgaagt
    14281 gaaccctgtg ttagagcgtg cgttagaccg aattttcatt ttacatgcag accacgaaca
    14341 aaacgcttcg acctcaaccg tgcgaaccgc cgcttcatca ggtgcaaacc catttgcttg
    14401 cattgctgcc ggtattgcct ctctctgggg acctgcacac ggaggagcaa atgaagcctg
    14461 tatcaatatg ttgaaagaaa tcggcactgt ggatcgcatt cctgaattta ttgctcgagc
    14521 caaagataaa aatgacccgt tccgcttaat gggctttggg catcgtgtct ataaaaacta
    14581 cgaccctcgt gcgaaagtaa tgcgtgaaac ctgccacgaa gtgttaaaag aactgaacat
    14641 tgataaccca ctatttgaag tggcattgga attagaacgt attgcgttaa gcgaccctta
    14701 tttcattgag cataaacttt atccaaacgt agatttctac tccggaatcg tgctaaaagc
    14761 catcggtatt ccaacctcaa tgtttaccgt aatgtttgcc ctagccagaa ccgttggctg
    14821 gattgctcac tggaaagaga tgtatctcca aggcaatatc aaaatcgttc gtccacgtca
    14881 aatctacacc ggacatacta aacgtgattt tgagccaatg gataaatcat aagattggca
    14941 aaaaatcgaa aaattttaac cgcttgtttc cacaagcggt tatattttgc ataaaatttg
    15001 caaatcaggc taatttattt agcagttgtg ttctaacatc ttgaccattt tcatcgcttt
    15061 ttacagccat aataaataag ccttttcctt gacttaattt ctcccaaaga ttgccaatta
    15121 aggctttttc tttagaatct tcattacttt ttaattgttc ccctttatat tccacaatta
    15181 aaattcgacc atcaataagc tctacaataa aatcagggta aaaattctga tgagctaatg
    15241 gtaaagaaaa ccctcttttt acaggatttc ttaaccaatc atcagaaaaa ctcagttgct
    15301 gctgattaaa atggtaagaa acccgtttat cttccacatc aatttcaaaa ctttggctat
    15361 tttcttgtaa tctaaatcca tcaagtttgg ctggataatc caataaattc caactttggt
    15421 aatctaatag cacttgtgaa tcagctaagt cgaattcgcc ttgaatattc atacacagtt
    15481 gaggtattac tttaaatatt tccccttttt cggcaggaga agataatatt tcaactctat
    15541 tctggtgaat ttgtaactgt tgctcaattt gctctttttt cttacctgtt gcagttcgaa
    15601 tcaacgcttt ttctaacttt tcacttaaat taccttttac ttgcactaaa atgtgacctt
    15661 cttgctcggt aattttaagt tgagaacgtt ttgcttcgct taaatcagac atttcaggga
    15721 gttgcgttaa tgctaaaact gttgtcggtg tatagaataa atctccttcg tttccaatcc
    15781 aattttcttg ttgtgggata cgaagcattt cagctacttc taatgcttca aaccccattc
    15841 caatcaattt atcttgtaaa ttacgagccg tttcgccgaa cgacttagag gaaagcggag
    15901 cataagcacg atttaaatct tcaatttgac ggtgtttagc ataaggcatt cgcaatactc
    15961 gccctaatag ctgctccgct tccttgctag aggaaacatt ttgtactgag caaaaaatat
    16021 aagcaaaagg gcaatcccac ccttctttta atgcctcaac cgtgatgatg taattgatct
    16081 tgcattgtgg attaaataaa tcgatattat ctaattcgtg ttgattacct atcacaatgg
    16141 caatctcttc ttcatcaatt tttaactcat caattaaata ctgttttaag acttctactg
    16201 ttactttgcc gtttttcggc tcagcttgaa acaataaatc ggacgaacgt actcgctctc
    16261 atactgtgct ttttgtgcta atgctcctct attgattaca gccccatcta ttgcttgttg
    16321 ccagttgtga tgttcggtca gcacaatagg caatttgatc atctcttctg cttttagatg
    16381 gcttgccgaa acgtgataca acacattact tcctgctttt ctatctgtgt ttggcgtagc
    16441 agtaaattct aaaatagctg atggggaaag ttgagatagc acatcaaaag agagtgaagt
    16501 ccgagcatta tgtgcttcat caacaatgac caaaggctga taagctcgca acaaatttgc
    16561 aaaagaacac ttaattttgc ccgtttgttt ggaggttaaa ccgttctctt gtagatcagt
    16621 agtggaaatc ttttctaaat ttgcctgaat atggggtagt aaacgctcaa aatgagctgt
    16681 taatttttca ttaaaagcat agatttttcg cccatcttga ttttctaccc gaaaattttg
    16741 aatagtagaa acgattacaa tcgccttatt accaaaatct tgtgggcgaa gtaaatcaaa
    16801 atcttcagac tcaataacca ttacttctcg gttaaaagtt ttatcaagta ctgcacggta
    16861 agggtgttgc ggatttttta atgcttctgt agtttgggtt ttaattgtac gagaaggcac
    16921 tggccacaag gtaaccggga aatcgcaatc caaatactgc tttgcaatac gagcaatact
    16981 atgcgaggct aacaacgttt taccgccacc agttggaatt cgtacacaaa cataaggcac
    17041 atcacgcaaa ttactgtgtt cacttgggat cttgtaacta tattcaggtt gaatttggct
    17101 aaatgcggtt tttgcatcag attgcaaaca agccgaaaaa tagtggctga cacggtttaa
    17161 tgcctcattt tggtaatttt ttaatttcat ttttttctcc tactattaac gagacattac
    17221 atcatatgga atctgtttaa atgtaatttt cttttcagct aactgcactt ctcctaaacg
    17281 gcacgcttcg ccatatacca caatatccat tccctgttga ataaattcag caaagtatgg
    17341 taactccgcc attaattttc gtgtcagaac attaccactc tgcggacgtt tatcgcctaa
    17401 aattccgtta tataacaaat agtaggcttt gccgttgaaa gtgccgacaa gcggtgattt
    17461 ttcgctgttt ttttgcaaag ggaaatgatt ttctaaatac caaatatggg cggctaaatc
    17521 gtcaaaacga atgttcggat taagtgaacc gaatgcgtca aatacttcct cgcctaactc
    17581 acaaaagcga aacgatccac caccttgcca atttactgct tttgaaatac cgccttgctc
    17641 accttcaatt acttttttca accgtgggac aacatgggtt ttagcatgtt cgccaatctc
    17701 aataccgata taacgacggt tcattttatg agcaactgct gcagttgtac ctgagccaag
    17761 aaagctatcg aggacgagat catatggttc agtcgatgct tctaatacaa attagattaa
    17821 tttttcaggt ttaggataat caaatgaatc ttctgcaata tcctccccaa ataattctag
    17881 atgttcacta gcagagtctt catttgttgc catatcataa tgagctctgc taattaagtt
    17941 atgaattttt ttcttttccg cacttcgctc aaatactctc cttggtcgaa agtctaaact
    18001 ttttataata tagtaatcac cattttttaa ttgctcatca atactttttt ggctataccg
    18061 ccattcacct tcaatttcta ccgtattttt attccattga tcttcaataa ttaattccga
    18121 aatcaacgta attgaactcg tttttttaga aaaaatggtt ggcttatata atccatcact
    18181 atgtttttta aattttatag aacgaggagg gaaaactaaa atttctcttg aatttccagc
    18241 attgtataat ggataggttt catcacctga ggtctcaagg taagttaagt catttaattc
    18301 atttaattca tttttgtttt ttgcatagca aaataaatta tctgtaactt taccaacttt
    18361 gcctaaaaaa gatggtttcc ttttcttttc ccaaattaag ttagaaatga aattcttccg
    18421 cccaaaaatt tcatcaagca taattttcaa atagtgactt tcgttatcat caagagtgat
    18481 ccaaattgaa ccatcttcgg caagtaactc tcgcagaatt tcaaggcgtg gatacatcat
    18541 tgaaagccaa atggaatgct ctaaattatc atcgtagtgg gtaaaggccg attttgtgtt
    18601 atagggagga tcaataaaaa tacatttgac ttgccccgca taaaagggca aaagagattt
    18661 taaggctgat aaattatcac cctgaataat taaattttgc ttgactttag ataaggtttc
    18721 agcagaagct gagctgtcgg ctgtcggctg tcggctgtcg gctgtcggct gtcggctgtc
    18781 ggctgtcggg caatattatg cgagaagtcc ggcaactcac gcaataggca atatggggtt
    18841 tgttttgctt ttttgacggc ttcttctttg ccgtaccaag taagggttgt cataaaatgc
    18901 acctgaaaag taaaagtgga ttattgtaac aagcggtcaa aaaaatagaa agttttacaa
    18961 aaaattaagc aaatttaacc gcttgcaaca tagaaaaggc acagttttat actgtgcctt
    19021 tggttatatg aaattagcct tgtgtgtatt taggctcttt aaatactgtt acttctggtg
    19081 cttgtccggt gaatttttca acctgtaccg tagcggtatt tggtgagtta ccctgtgcta
    19141 attttgatgt gccttcatca cgggttagca cgttagggtt gccgttttta catagcggtt
    19201 gctcgctggt gccgagatcg agcggatcgt accaagctcc ttcgtgcaag gctaatgtac
    19261 ctttgataat gccatctgtc accaccgcac cggctaatac ttgaccacgt ttgttaaaaa
    19321 tacgtacaat atcaccgctt gtaatgccac gagcggcggc atcttcagta tggatcaaca
    19381 ccggctcacg gtcattaacc gcatattgtt tgcgtaatga tgagtaagct aactggctgt
    19441 gtaaacgcca tttagagtgt ggagtcacca atgccaacgg ttcttctgcg gtggttttac
    19501 ccgagtattc ttcgtgttcc atccaagttg ggtgaccttt acagtcatca taattcattt
    19561 tggcaatcac ctcagagaaa atctcaattt tgccggacgg tgtgcctaat ggatttagga
    19621 gtgggtcatt acgaaattct tcataacgaa cccatttttt cgctttgtct gatgctttaa
    19681 aagaaagtgg tttattctct tgccagaatt tctcgaattt cggcataatc acacgatttt
    19741 tgcgtgctgc ctcaaatgca gtttgataga aactttgtag ccaatccatt tcagatttgc
    19801 cttcggtaaa ttccgcttct ttgcctgcac gtttggctag ttcggcaaaa atatcgtagt
    19861 cgttttttgc ctcaaattgc ggttcgacca cctgtttcat cgggaaaata ttcatcattg
    19921 aataatcgcc cgacatagtt aagtcattac gctcatagct ggtggttgcc ggcagcacga
    19981 tgtcagacat acgagccgtt ggtgtccaat ggcattcatt gacgataata gtatccggtt
    20041 tttgccacgc tttcaccaaa gtgttggtgt cttggtggtg ggtaaacgga ttaccccctg
    20101 cccaatagac aattttgata tcaggataag taatttgtgt gccattgtaa tcaatggttt
    20161 tgcccgggtt gagcagtgca tcggaaatac gagccaccgg gaatgaagat tttgatgttt
    20221 catctaacca ggttttcgct ccggcttcta ctgccggatt tgctgtgata gagcctaaaa
    20281 tgccccctgt ggcactcggc acgccgccgt ttgagtaatg gtagcttaaa ccgaaaccac
    20341 cacccggtaa gccgatttga cctaacattg cagctagggt gactaacatc caatgccctt
    20401 gttcaccgtg tcgttggcgt tgaatccccc agcctgccat taacattgtg cgtttagatt
    20461 ggaaatcagt cgctaatttt ttaatggttt cttccggcac accacaaatt tgacttgccc
    20521 attttgcatc tttcggttga ttgtctgttt taccgagcag atattcttca aacttctcaa
    20581 aaccggtggt gtatttttta aggaatgctt gatcgtgttt gccttcagcg actaaggtat
    20641 gagccatacc gagcattaac gcaacatcag tgccggtgtt taccggtacc cattctgcac
    20701 ctaaaaattc gcaagattca ctttttaccg ggtcaataca gataatgcgt ttcccgctct
    20761 ctttgagttt tttgaagtat tcaatacctt gttgatcggt agaagtccac gcaatgcgta
    20821 gcgtatttaa cgggttagct gaccaaagca ccacaatatc tgaactttct aaaatcactt
    20881 cccaactagt ttgctgttcg tacacctcga ttgtacccaa gacgtgtggc ataatcactt
    20941 gagcagcacc ggtagaatag tcgcctttta caccaacaaa tccgccggta acatttaaat
    21001 agcgttgtaa cagtgtacgg gaagcgtgta atgccccaga actataccaa ccgtaagaac
    21061 caccaaaaat agcattcgcc ccgtgagcct cacgaacacg tttcatttca ttcgcaacta
    21121 attcaaatgc cttatcccac gaaactcgca cccattcatc acgcccacgt agagtagtat
    21181 ctttattacc ttctaagtag cctttacgca ccattgggta ttttactcgt gtttcaccgt
    21241 gtacttggtc tgctaccacg tgttgcaatt catttggcac agaaatctca aaaacagaat
    21301 cagatttcac cactttgcca ttttctacca ctacacctaa aggcccccag tgggcggcag
    21361 ttactactgt tttcatctcg gctgctttgg cactggtgga agctaatgcc cccactacac
    21421 cggtagtacc actggctaaa cctgcaccgg cagctaagct taatgatgaa ttttttagaa
    21481 aaccgcgacg acttacgtca atattgtctt gttttttcat aataaacctc gtttgaagtt
    21541 aagttaaaaa tagacacctt tctaaagtcg agtggataaa ccatttctcg tgtatccatt
    21601 ggtaaaagca ccgacggtaa tttttgcaaa atgttaggaa aaaatgaccg cttgtagtag
    21661 gtgctttacg gcttgctacc atatctctgc tctcagcaga cacttaggct cacaagctcg
    21721 gtatcctcta agttgcaatt aatgggaact gcctgctaca tcttttgcat tacgttggag
    21781 atagatagtc accgcacgca catcatcagc cgacatagat gttctgtctt tcattgaatt
    21841 taccacccca atccattgat ttgcggtgta atgttctgcc ccaatcggtg catggcaacc
    21901 gctacagtgt gtttggttta agttatcgcc aaaatgattt agtgcagtaa tattggcagt
    21961 gactgcattt ttaggagcag taatttcaaa attgatttct ttccaatttg agttggtgac
    22021 attatcaaac actgtttttg tgacattcac tttgctttga gcgtcatcag gtagaagagc
    22081 aaccataata cgcttgccta aatccatata caccacagat tccgcacctt cttgttgcca
    22141 gccattaacc gttgctttaa cctgctcgcc ttctgctgtc cattgatgta attctgcata
    22201 aggtaacaag cgaatttctc caccttgagc gagctgcact ggagtcattg cgagcgtata
    22261 aagggtttta tcatttgtgc taaattccgc accgtgttta gctaattcgc ccattgctgc
    22321 ggcattatct accggcacat caggcataaa atgggcaatt cctttatggc aatcaataca
    22381 ggtttgatta gtttcttggg ctagtttgtg cattttctgt gccgcttctg tttgttcaga
    22441 aagtaccatc gcatcaaaac tatgacagct tttacaggtc atagaatcgt tttctttcat
    22501 ttctgcccaa acacgttgtg ccatttctag acgatgggct tcataggctt cttgatcagg
    22561 taatttattg gttacaacgg tgtgccaaac atcttttaat gcgatgattt tagctttgac
    22621 ataatgcaag ccgtcttgtg gtagatggca atccgaacac tcggctcgaa ttcccttacg
    22681 gttggaaaaa tggacactgc cttcccactc tgcctgtggg tgagtcatag aatggcagct
    22741 cacacaaaat tctgttgagc tggtggcttt cattgcatat tgtgtgccac ctaataccgc
    22801 agcacctaat gccataatac cgacaaatac agcaattttt ttcatcttag ccataaatta
    22861 ccccacttaa tacactaaaa attaaagaca gaggcattgt attaactccc aagaggtata
    22921 aaaataagta aaaataccta ttacctcgaa agagtgagaa taatttgatc taaggcaaaa
    22981 atatgtagtg aaattttagg ctttttcaga gaaccacggc ggtaagataa attgtgcatt
    23041 ggcaaacaac tccggtgcaa tcacacggct ctgcccttgt tggatttggt aaaccaactg
    23101 tggcaagctg atagataagt cgtgggtttc tgcgtaagtt aatccaattt ggctatcggt
    23161 attaaaatag taagtgccgt ttaccccata atgtggctgt aagcggatcg cattggagac
    23221 ggctttaaaa tgccgtggtg aaacactctg tttccacgca tttgccagaa tattcgcttg
    23281 gtcataagca atactggctt gggaataagt gggcgatttg ccgaaaaacc gttcgtaatg
    23341 ttggctaaac tgtctgccta aataattttc gcttaaccca ctattggtac tccaaagaac
    23401 gccttcgcaa agtttctcgt gtggcaaaaa cgccgaaggt gcataaatac tgtaaataat
    23461 ggcatttgtt gggttgcgaa tgaacgtttg ataaaactgt acaatatctt ctgcaaaata
    23521 agaggcaaac acaataatgg aaggtgcgag attatgcacc tgtgccatta atgtggcata
    23581 attatcttgc tcttgggtga gttccagata atccacattc cagccttgct cccgcaaact
    23641 tagggttaaa ctttcaatac cgatatcaac tttttgccaa ctcaccgtta ccaccatcac
    23701 cgttttattc tgaagccaag gggcataatg gtaacggtaa tattgcagaa agtgagatat
    23761 acctaagcca taggttacat cactggcgca aacctgaaac atattttcaa ttcgttgatt
    23821 cggtaaattt tgggcaagtt tatttgagcc actatgggtt gcaatatgca aataaggaat
    23881 gcctttagtt gcaattaatt cgtgtacttc cggcaagtag caggcataag cggtggaaat
    23941 cgcatcaact tcttgatcaa ataaatgatg gtatgcctga agaatacttg ctttatcttt
    24001 aacataaaac ccagccgttg caacctgtac ttctctgccg tgaataccac cttgttgatt
    24061 gatggtctca accgcaagtt gagtgccgtt aagtagctct cgggtatcga tttgcccaat
    24121 accctgttca acataaggca cgccaataat aatcggacga ctatgatggt ggtttatcgt
    24181 aaaaatcggt ggttcgtgtc gagttgaagc cgttacaagc ggttgttttt tcgcgataat
    24241 ttgcaatgcc agttgttcaa tgttaaagct ggcaagaatg gattgggtta gttttcccgg
    24301 tgtgggtaaa cagattaaat gttcggtaat ggcaaaaaca gctaataagg ttcggctttt
    24361 ggtatgtgtt ttcgcaaaaa tattttcgat atgtttatca acagtccgtt tgctgataca
    24421 aagctcattg gcgatatcct cattgctcaa accactgcta attagagtga gaagctcaat
    24481 ctccctttta ctcagtccat aaggcaaatc ggtatgctct gcttgagtca atacaaacga
    24541 ttggtggcgt tctaggctga tcttaagcca ttgatggttt gaactatagt aaaactgcaa
    24601 gctattttta tctgaataga gcaatgcctg tgcatagtgg caaatttgcg gtaattcagc
    24661 aaaatagtct gcccctgctt tgtcttccca ttctgatatt tcgccttgtt catttactaa
    24721 acaagaccat cggctacgtt tatccattct cacctcgaac taaaaacgtt agctaaaata
    24781 gcaaaattat ctcggcatta atatgatata aatcaaacta agcaacggtt gccagatttt
    24841 tataggtaga gcatacaatt taaattatac ctcttgccta attaggtttc tcaccataaa
    24901 atgaaaacca atttattgaa gactccgagc attatttcct aactctaaaa attaaagaca
    24961 aatttttgat atggaattta tgccagtaac agcataaagc tgttcaaagg ataacttaga
    25021 aatgggttgt cctctcgtgt ttagaaaggt gtcaaatgca gtctattatc ccaattaaaa
    25081 acgtgggtga tgatgtcgtt tcaggtttag ttgatcgctt tcagcgtcaa tatacttatt
    25141 tgcgactatc cattactgat gtttgtaact tccgttgtaa ttattgcttg cctgatggct
    25201 ataagccgcc ttcacataag caaacttttc ttagcgttga tgaaatccag cgggtggcta
    25261 aagcctttgc caatttaggg acggaaaaaa tccgtatcac cggtggtgag ccaactttac
    25321 gcaaagattt cctcgaaatc gctcacacta tttcacaaac acccggtatc cgtaaagttg
    25381 ccctaaccac caacggctat cgcctagagc gtgatgttga actgtggcaa caagccggta
    25441 ttaccgatat taatgtgagt gttgatagcc ttgacccacg ccaatttcaa ctgattaccg
    25501 gcgagaacaa gttgcaatct attttaaagg gtattgataa agcctttgaa attggctacc
    25561 caaaaattaa agtcaatgcg gtgctaatga agcaatatac cgcccctgaa ttggataaat
    25621 tcctcacttg gatcaaagac aagccgattc aaatgcggtt tattgagctg atggaaaccg
    25681 gtgaaatgga tagtttcttc caagctcaac atctttctgg tcaatcggtg atgacccgct
    25741 tattacaaga aggctggcaa ttacaaccca aagcgatgtc tgacggcccg gcaaaagtgc
    25801 tttctcaccc tgattttaaa ggcgaaatcg gcttaattat gccctacgag aaaaatttct
    25861 gtgcctcttg caaccgcttg cgtgtttccg cacttggtaa actgcatctt tgcttatttg
    25921 gtgaagaagg gattgatatt cgtgatttac tggcaagcga tgagcaacag ttacagcttg
    25981 aaacccgcct aaaatcttcc ttacaaggca agcgagaaca ccactatttg catattgggg
    26041 atagtggggt taggaataat ttggcgagta tcggtggtta aacaaccacc gagcgtgttt
    26101 tttctgttac ttttctttgc ttcgccaaag aaaagtaacc aaaagaaagg cgaccccaga
    26161 ttttccttaa tccttcgctt gttgctaact tttgggacga acttttcaaa ctcgccaact
    26221 gcgttggctc aaacacgaaa agttgtcctc aaaagtttac gcaatcgcta cggcggaaaa
    26281 taggggcaag cggtacatta tttaagattt ttgcaagttt ttatttaaaa ataaccgctt
    26341 gtaatgttcc agcttctccc ttctgaaccg cctgagcgac tttgaattta taggaaaaat
    26401 ttagtgtttg agccaacgaa gttggcgagt tttaaatttt tccgttaaac aaattcaaat
    26461 aaaatgaaga tagcggtgaa gtagggtgtg ctttctttgg ttactttctt tgcacaagca
    26521 aagaaagtaa caagaagacg ctcaatatta attttacaat caaatttaaa gagacaaaca
    26581 aatgacaacc ttcacccaca tcaaccaaaa cggcgaagcc aatatggttg atgtttcaat
    26641 gaaacaagaa accgtacgca ttgcccgagc ggaggcattt gtgcgaatga atgccgaaac
    26701 attacaaatg atcgtcagtg gtaatcacca caaaggcgat gtattcgcaa ccgctcgaat
    26761 tgccggtatt caggcggcga agagaacttg ggagctgatt ccactctgcc acccgttatt
    26821 gctttctaaa gtggaagttc aactggaggc gttgccggaa agcaaccaag tgcgaattga
    26881 atcactctgt aaactaaccg gcaaaaccgg cgtggaaatg gaggcattaa ccgcagctag
    26941 tgttgctgct ctgactattt acgatatgtg taaagccgtg caaaaagata tgattattga
    27001 aaatgtaaga ttacttagta aaagtggcgg aaaatcagga gatttcaagg ttgattaaga
    27061 tacttttttt cgcccaagtg cgtgaacttg tggcaacgga tagactagat gttgagccta
    27121 cttttaccac tgccgaagcg ttgcgtgaac acttaagcca acagggtaaa aaatggcaac
    27181 ttgcccttga aaaaggcaaa ctgctggttg caattaatca aacgatctgc ccgcttgaaa
    27241 cggagatcaa agacggcgat gaagtggcat tcttcccacc ggtaaccggg ggctaaaatg
    27301 tttgaaaccc tgattgaagt acaagaagct gaatttgacc aaaaccgcat ttaccaatgg
    27361 ctcagtgaac aacatagcgt gggggcagcc actctattca tcggtaaagt acgtgaaatg
    27421 aatttgggcg ataatgtttc cggtttgttt cttgaacact atccggcaat gactaaaaaa
    27481 gcattgcaag aaattgtggc tcaagctcgc actcgttggg atttacaacg cgttgcggtg
    27541 attcaccgca ttgggcaact gcataccggt gatgaaatcg tattagtcgg tgtgagttct
    27601 gctcatcgag gtgatgccta ccacgccaac gagtttatta tggattatct caaaaccaaa
    27661 gccccatttt ggaaacgaga acaaacccaa gccggtgaac gttggattga agggcgtgag
    27721 agtgaccaac aagccgccaa aaaatggcaa tagaaaaaat ggcaataatt tgcaaaaggt
    27781 aacgaatgga aaatttatat attgatttgc agatcgcctg cgaaaatacc gaaaacttac
    27841 caagtgaaca acaattttat acttgggtac aaaaagccct cgcagttgag gcaaaaaccg
    27901 atgatttccc tgagagtgag atcaccattc ggattgtcga tgaagcagaa agccacgagc
    27961 taaatctgac ttatcgtggt aaagacaagc caaccaatgt gctatctttc ccgtttgagg
    28021 cccccgaagg aatcgaaatg ccactattgg gtgatttagt catctgtcgt caagtaatgg
    28081 aaaaagaggc ggaagaacaa ggtatttcag ccgaatccca ttgggctcat ttggcgattc
    28141 acggcacact tcatctgctc ggctacgacc atattgagga agatgaagca gtggaaatgg
    28201 aaagcctcga aaccgaaatt atgcaaagtt tagggtatga agatccgtat ctttcagaaa
    28261 aaatatagtc ttgtagggga gggtcctgtg ccctccagta ctccattata atcggacagg
    28321 cacaggagct gttcctacaa gttatatgag aacgatcgca atcataacat ctcctaacaa
    28381 tgccgacttt attcaacaag gctattttta cattcccgaa aatcatcagc ttaaagctat
    28441 ccccttttcc aatgccaaaa cgattttagg acaagaatac ccttttgcca tttatactat
    28501 gcaagcagaa aatggggtga attttaactt agatgctttt gcaatacttg ccggcactat
    28561 tcaagaaaac ggtactttat ttttgctttg tcctcagtgg gataatttgg aaaatgaatt
    28621 agatttcgat gcgttacgtt ggaacgaaaa tcaggctatt gcctgcccga atttctatca
    28681 acattttaaa caattagtcg ctaaatttgg ttttgaagtc agaactaatt tgccaaaatt
    28741 accggctaca agcggtcaaa ttccttcaaa aatttaccaa ttaacgcaag aacagcaaaa
    28801 tattttgcaa aatctaccgc ttgatcctgc cgatattcat ttgattaccg cccctcgtgg
    28861 gcggggcaaa tctacccttg cagggcgact tgcaaaagcg ttacccgcac aaaataaggt
    28921 attaattacc gcacggtctt attctgcatt gcccagtttt tggcgttcgg cagagcaaaa
    28981 aatccctttt ttcgcacctg acaatttaat cgagcaagtt aaaagtaaaa acatttcacc
    29041 taaccaatgg ctctttattg atgaggcagc tagcctaccc ttgccgatac tccacacact
    29101 ttgtgcctat tttgaaaaag tggttttaac cacaacaacc caaaattacg aaggcacggg
    29161 gcgaggattt gagctgaaat tcccggtaat gttggataaa ccgtttaaac attggacgtt
    29221 atctcaacca ttgcggtgga gcgaaaatga tcctctcgaa gcatttgtga ctgagttgct
    29281 attactttcc gaagaaaaat ctcccctctt tagcaaagag gggaaggggg agatttattc
    29341 gcttcgctca cactatgtgc cgttgctaaa gcaacgttca aacgcaaagc gtttgtggca
    29401 gaagcaatta tcgaagaata taagttattc gaataagcat ttacaggaaa aaatcgcttt
    29461 ctaccactta ctcgccaacg cccattacaa aaccactcca actgacttac gccgtttatt
    29521 tgatggcgaa aatcagcttt tgttttcaca acaggaaaac gagcaactta tcggcggaat
    29581 ttgggcaatg caagagggtg gtttagatga aaaattaacc caagccattt ggctagggga
    29641 acgccgtccg caaggcagtc tagtggctca atatctctgt tttcaaggga atttaccgca
    29701 ggcttgcaaa ttgcattcca ttcgcatttc tcggattgcg gtattgcctg aaaagcaaaa
    29761 tcaaggcgtt ggcaagcggt tgatttctca gtttattttg caaaattcgg tagaaaaacg
    29821 accgcttgat tttatctctg tgagctttgg gctaactact ccactccacg cattttggca
    29881 atcttgtggt ttccaacttg tgcaaatcac accgaataaa gaggcaagca gtggttatca
    29941 aagtgcaatg atgatttacc cgatttcgga gcaaggaaag ttatttgcac agcaggcaac
    30001 ccaagccttt gccagagatt tcgcccttca gccatttttc acggaaattt gtgaggaatt
    30061 gcaaaatttc gaacaatttc gaccgcttgc cacacacaat ttagatgaac gtgattggaa
    30121 aaatttaacc gcgtttgctc atggcaagcg gacgttttca gcggcgtatg tgagtttaaa
    30181 acggctttat ttatcggata aagcacgctt ttcagagctg gatatttttg aacgaaaagg
    30241 gcaaaaaatc tccaaaatgg aggtggaaaa ttatcgaaaa ctcgttttgc aaaacttaaa
    30301 caataaatca tttaaaataa tttataggtt ttattacatt tttttgtgtt tttgctcttg
    30361 ctaaatctgc aatttaatcg tataaattca ctgtttattt ttcattttga tgaggaactc
    30421 caatgtcaat gtttagtcac attcaagctg ctccggcaga ctcaatttta ggcttaggtg
    30481 aagcgtttaa agcagatagc cgtgaaggta aaatcaacct tggtatcggt gtttatatga
    30541 ccgatgaagg caaaaccccg attgtcaaag cggtaaaaga agcagaaaaa cgtttattag
    30601 agacggaaaa cagtaaaaat tatttaacca ttgacggtgt tcaagcattc aatgcggcaa
    30661 cgcaagcgtt attatttggc gaaggggctg aagtgattac ctcaggtcgt gctaaaactg
    30721 cacagagttt aggtgggaca ggggcattac gcattgcggc ggaatttatc aaacgtcata
    30781 cgaatgcgaa aaatgtatgg atttcaaccc cgacttggcc aaaccataac ggcatttttg
    30841 atgcagtagg cgtgaatgta aaaggctatc gctactacaa taaagagact aacggtttag
    30901 attgggaaaa tttaattgcc gatttaagcc aagcggaagc cggagatgtg gtgttattgc
    30961 acggttgctg ccacaacccg accggaattg acccaacacc tgcacaatgg gaacagttag
    31021 cagcattatc tgccgaaaaa ggctggttgc cgttatttga ctttgcttat caaggctttg
    31081 caaacggttt agaggaagat gcttacggtt tacgagcttt tgtgaaaaat aaccgtgaat
    31141 tgttggtcgc aagctcattc tcgaaaaact ttgggttata taacgagcgt gtcggtgcat
    31201 ttaccctaat tgcagataat gctgatgatg ccaaccgtgc tttcactcaa atcaaatcga
    31261 ttattcgtgt actttactct aacccatctg ctcacggtgc aagtgcagta gcagttgcat
    31321 tggctgatcc tgaccttaaa gcacaatgga ttgcggaatt agatgaaatg cgtaaccgta
    31381 ttaaagaaat gcgtagccaa ttagtgcaga aattaaaaga aaaaggggca aacaaagact
    31441 tctctttcat tactgagcaa aatggtatgt tctcattcag tggcttaaca ccggagcaag
    31501 tggataagtt aaaagatgag tttgcaattt atgctgtgcg ttcaggcaga atcaatgtag
    31561 caggcattac cagcaaaaac attgatgctc ttgccgatgc gattgtgaaa gtgctttaat
    31621 taaaccttaa agatatatag aggcataagc ctgagtgctt gtgcctcttt tttatctttt
    31681 aggtacaagt gtggacactt gcaccaacgt tgattattcg tagaactagg tttccaacca
    31741 aagcataaaa tctgctaccg tatgaaatga gccgaacacc agcacaatat cattttcgtt
    31801 ggctgtttca aacaatactc ggcttgcctg tgccacattt tcatagctac aagcggttga
    31861 atttggcaaa acgtttacca atttcgctaa caccgcctcg cctgtttgtc cacgccaaca
    31921 atctagccct gcacaatgcc attcatcaat aatattagct aatggctcga caataccgga
    31981 taaatcctta tcttctaacg cactaaacac cgcatagatt ttttgatttg gttgctttaa
    32041 ctcccgcagt ttgtcagcta aataacgtgc tgcgtgtggg ttatgcccta catcaataat
    32101 tacttttgca gccggtttag gttgagaaaa atgagtaaaa tcggtatccg tcagggtttg
    32161 aaaacgccct gtcatttgag cttcatttaa ggcttgtcga ataatctttt catcaatttc
    32221 aaatggcagt tgcattaata ctgctaatgc ggtgccggcg tttggaatcg gaataagcgg
    32281 gattggtaaa tcggtaaagg atttttcttc agaataccaa tgaaacagat tattcttaat
    32341 ttcaaactgc cagtctttac cccggtaaaa agcgtgacaa tttaacgaat cagcaatctg
    32401 tttaatcgaa tgagggcaat caggctcgcc gatgacaacc ggaatatttt cacggaaaat
    32461 gccggctttc tcacgcccga tgtcttcacg gttatcgcct aaaaatgcaa cgtggtcgat
    32521 atcaatcgag ataatcacgg caaggcttgg atcaataata ttagtggcat ctaatcgccc
    32581 acctaatccg acttctaaaa tcacaatatc gagctgattt tgtttgaata gctcaaatgc
    32641 agacagcgta ctaaactcaa aataagtgag tgaagcggtc ttttttgcat taatttttgc
    32701 aaatgcttgg acgtggtcgg catcaggtaa tacttcgccg ttaattcgca cccgttcatt
    32761 atagtgaatt aagtgcggtg aagagtaaac accaacccga aatccggctt ttaataaggt
    32821 aacttctaac aaacggcagg tcgaaccctt gccgttagta ccggcaacgg taatcacata
    32881 aggggcaggc ttgagtaaat ccagctctgt tgcgacctta cgaatacgat ctaagcccat
    32941 atcaatcggt ttagaatggg cttgttctaa ataggaaagc cacgtttcca aagaatccgt
    33001 ggctttaggt atgcttaatg tattcattca gatattttat tctgcgtttt ctacaaccaa
    33061 ttccgccact ttaaacggcg ttggttgatt ggttaatttt gcacaaagac gggaaagggt
    33121 atcacgcatc tctttacgat gcacgatcat atcaactgcc ccgtgttcta ataagaactc
    33181 ggcacgttgg aaaccttccg gcagtttttc acgtacggtt tgctcaatta cacgaggacc
    33241 agcaaagccg attagggctt ttggctcagc aatattcaca tcgcccagca ttgccaaact
    33301 tgcggaaacc ccacctaaag ttgggtcggt taatacagaa ataaacggta cgccctgctc
    33361 tttcattttg gctaaaatcg cactggtttt tgccatttgc attaaagaga ataacgcctc
    33421 ttgcatacga gccccgcccg atgccgaaaa acagataaac ggaatttttt cagctaaagc
    33481 tttttccgca gctttcacaa attttgcacc tactacagac cccattgaac cgcccataaa
    33541 ctcaaagtta aaggaggccg taaccaccgg catattatgc aatgtaccgg caagcacgat
    33601 aaaagaatct ttctcaccgg tttgtttttg cgcggcagtt aaacgatctt tatatttctt
    33661 taaatcttta aatttcaaca catcttccgg ctctaagtcg gcagcgattt cgaccgcaga
    33721 atctttatct aacaaattca ataaacgggt gcgggcatca atacgcatat gatgatcgca
    33781 ttttggacaa acctgttggt tgcgttgtaa ttcttcgcta tagagaactt gttcacaact
    33841 tgtgcatttt gtccatacac cttccggcac ttttgatttt gcattgcttg atgatgaaga
    33901 gtctctacct aaaattctgt ctaaccagct cattattatt ccttttggat tgagttgttg
    33961 ggttcactaa atggttgcta ttaaagcata atttatcggt ttttgatatg ttttcttgac
    34021 atatcagatc actaactatg tgtataagtt cgataaaaaa acgcaatcag aagaatgatt
    34081 aacatcacca caatttgaat taagcgtttt ttggttaatt tttccgctgc cattgctctg
    34141 ctcatactta ataaatttcc gcattataag cgaaaaagca cgggctatgt agaatttgca
    34201 aaattttgat caaaaataac cgcttgtaaa aaggaaatac tatggcaacc attgaacaat
    34261 ttcttgaggt tgtaaaccaa cttcgtcacc ctgaacacgg ctgcccgtgg gatctcaaac
    34321 agaattttga cacgatgttc cccacttatt ggaagaaacc tacgaagtag cggaagcgat
    34381 tcacacccaa gatcgcactg ccttgcgtga agagttaggc gatttattac tgcaagtggt
    34441 atttttaagc caattagcga aagaggaagg cagtttcact tttgatgatg tagtaacgga
    34501 tattcacgat aaactgattt accgccaccc tcacgttttt ggtgatgtga aagctactaa
    34561 cagcgaagag gccttacaaa gttgggaagc acaaaaagcg aatgatgcaa aacaccgtag
    34621 ccaagattct atttttagat gatttacctt ttgctttgcc tgctcttacc cgtgcaaata
    34681 agctacaaaa acggtgtgca aaagttggat tcgattggga taaccctcac gatgtgctgg
    34741 caaaagtcga agaagaactc gatgaagtca aagcagaaat cgcacaatat ccggctcgct
    34801 ccatcgagct tgctgaagaa ttaggcgatc tcttgtttgc gattgtaaat ttatgccgcc
    34861 attatcatac cgatgccgag gaaattttac gcaatgcaaa tctaaaattt gaacatcgct
    34921 ttcgaaaagt tgaaaaatct gtgaaaaaat cgggaagaac tgtaaaagaa tgtaaattag
    34981 aagaactaga tgtaatttgg cacaaaataa aa
//
LOCUS       DANLXO010000013        34794 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.013, whole genome shotgun sequence.
ACCESSION   DANLXO010000013 DANLXO010000000
VERSION     DANLXO010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34794
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.013"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXD69_000540"
     CDS             complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXD69_000540"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HDL6282769.1"
                     /translation="MNNETLFSKQKWIAYAQLMRFDKPIGTLLLLHPTLWALFIAAEG
                     MPPVAILAIFTLGVIVMRAAGCVINDYADREIDGHVKRTSQRPLATGRVTTTEAKVIF
                     AILLLFAFLLDLMLNRYAFLLSFVAVFLAVIYPFMKRFTHLPQVVLGMAFGWSIPMAF
                     GAVTETLPLECWLLFFANLAWTVAYDTQYAMVDRDDDLRIGVKSTAILFAQYDNKIIA
                     LLQFITLILLGLLGVVKDYHIGYFVVLALSATLFIYQCWLTKKRERSECFKAFLNNHY
                     FGLGVFVAILVGIYF"
     gene            complement(1067..1828)
                     /locus_tag="PXD69_000541"
     CDS             complement(1067..1828)
                     /locus_tag="PXD69_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HDL6282770.1"
                     /translation="MKQANRHKKIIELVNQLGYVSTEQLVAELNVSPQTIRRDLNEMA
                     ENNLIRRHHGGAAAPSNTENSDYTHRKQFFSHEKNAIAQQVAKLIPNGASLFLDIGTT
                     SEAVALALLSHKNLKVVTNNLNAAHILMQNEDCQITVAGGGLRSDGGLIGEETVRFIN
                     QFRLDFGILGISAVDMDGSMLDYDYHEVQVKRALMECSRQVVLVTDHSKFTRTAIARL
                     GNVKEVNYLFTDQDLPLELQTHLSQSDVIVKICNE"
     gene            complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXD69_000542"
     CDS             complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXD69_000542"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDL6282771.1"
                     /translation="MELTALTALSPIDGRYQDKVASLRPIFSEFGLLKFRVTVEVRWL
                     QKLASHTQINEVPVFSEKANDYLNQIVADFSLEDANRIKTIERTTNHDVKAVEYFLKE
                     KCEALPELQAVNEFIHFACTSEDINNTSHALMLKTAREEVLLPEWKKVIDAVAELAKC
                     YQHIPLLSRTHGQPASPTTMGKEMANVAYRLQRQYKQLENLEILAKINGAVGNYNAHL
                     SAYPEIDWHTFSQEFVESLGVTWNPYTTQIEPHDYIAEFFDCVARFNTILIDFDRDMW
                     GYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGQKLPISRWQ
                     RDLTDSTVLRNLGVGLGYALIAYASTLKGISKLEVNEQHLRDELNQNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDETAMREFIDKLEIPENEKNRLKEMTPASYIGYAVE
                     LVDKL"
     gene            complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXD69_000543"
     CDS             complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXD69_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HDL6282772.1"
                     /translation="MADYHDITLAYAGVCQAATLVQQFAHKGMADREAFKCALESLLI
                     TQPESTLSVFGDDLSHLKMGLETALAQTGGGNGKLDTEVGRYWISLLALSQKLNKNPE
                     AKQQLAQRLQQVERQLALYEDNVMADQMIANLAAIYSDIISPLGTKIHVMGMQDYLVR
                     PDIQNKIRASLLAGIRAGILWQQVGGSRWQFLFSRKKIFNQAQKFYRQI"
     gene            complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXD69_000544"
     CDS             complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXD69_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HDL6282773.1"
                     /translation="MKSLFPFFALYQTHFGRLLLGVVLAILGLAASIGLLSLSGWFLA
                     ASFLAGNALIFNFFYPSSGVRGLAVGRTISRYFERLVTHDATFRVLANLRASVFKKLI
                     PLSPSGLNRFRNSELLNRLVADVDTLDTLYLNLVSPFVSAVMIIAFMAIGLSFVSVPL
                     MLIICGTLLVLLAVIPTVFYRLGLKLGRNAIQSRANYRSQFIEWVQLNAEFLLFGNLN
                     QMSEKLQQTEQQWLNAQSKESRLSGLSNSLIMLSNGILTCVVIYLVSTSINVPTAKYP
                     EALIALVIFCVMASAEILSPIGIAFLHLGQVITAAERISEITEQQPNVTFGSKAEWQN
                     LSQNQPLVRCENVSFAYYGEQNVLNNLSFKVLKGQKVAILGKTGSGKSTIFQLLNRNY
                     DPTSGQIWLNNCKIDEYSEPMLRSKLVTLSQRVHIFSQTLKDNLLMGNAQATDEQMQE
                     AVRKVGLGHLLETDGLNLWLGEGGRPLSGGEQRRLGLARLLLSSAELVLLDEPTEGLD
                     RETEQQILNLILTHCCDRTLIMITHRQSGLDKFDVVYRIDNGRLVG"
     gene            complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXD69_000545"
     CDS             complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXD69_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HDL6282774.1"
                     /translation="MEKQRQRELQKWLKSQQKVIKKYMHLNILLGSFSSLCMIGQMWL
                     IATMLDKMLIGKQSPNSFLVEIMLLFCCFAARAFFIFLRERVGFKAGQTLRLHLRRQI
                     LAKMEAVGPMSIQQKPAGSWATLMLEQVENLHNFYARYLPQQFLSLIVPLLILCFVFP
                     INWAAGAILFATMPLLPLFMILAGMKAVEANQRNIGILSRISGQFLDKLKGLETIRLF
                     GQAEKQTEQIYQSTEDFRISTMDVLKMAFLSSAVLEFFTAVSIAVTAVYFGFIFLGEL
                     DFGYYGTGVTLFIGFFCLMVAPEFYQPMRELGVFYHDKAAAISAADNIETFLKEKVKT
                     QGGNLQENVENQPLVIQAKDCVIFSPQGKALTQALNFELNAHQHIALVGQSGAGKSSL
                     MNMLLGFLPYEGSVTINGTELRDLNLSQWRAKLAWVGQNPQLMHGSLKENILIGNPNA
                     TDSELAKALQLSKADEFVARLGLEHQVQDSNIGISGGQAQRIAIARALLRPYELLLLD
                     EPTASLDMDSEQQVLAALHNLSREQTTLMITHRVEDLTQCDEIWVMKQGQIIQKGRFT
                     ELEHTGFFAELIHNELVHQGEI"
     gene            complement(7602..11699)
                     /locus_tag="PXD69_000546"
     CDS             complement(7602..11699)
                     /locus_tag="PXD69_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HDL6282775.1"
                     /translation="MTDENKQTATNQTDSAQEPQATQPKKSKWRFLKHGFCLTFILLL
                     LAILFLCTGYGQRKVLSWVDKFVEPLQLGQVQGSLQDGLQLSDARFVMDGVNVTVGQA
                     DLHIGFSCLLHYEMCLNNLSLKDTEVLIDTTKLPPSQPKEETEPFTELNLPLGISAQN
                     INLENIKVKVDDMDIHLNHFHTALSGKGRAITVHPTQLEGLNLLLALKLDETDTEQAV
                     DFAQKNAKTEALSATNPQEIADKVIQEAVEKTSEKVVEGFHQLQRKTVAQAEQVDNKV
                     DWAAIKAQLAQPLLDKNIRFSLPLDLNIEQIDIANVAIAQKAKDEKGNLIEPISLLNV
                     ASLQLQAQAKDQHINLKSLDFKSDQGDLTASGSLSLQDNYPLSWTLSGHEAKTAKVKL
                     PFNQIEASLSGELYDKTSLKVKTAGAISASLEGNVALAQAKTPFDLSLKSESMRYPFA
                     PQQNGDVLSLENIAMRLNGNLLDYALEAKVSAKGMGVPASSASLTGKGELTHFNIQDL
                     SLNTLEGTAKIDGLVDWSEGVAWRSNLKLQHINTKSLLADWPAVLSGSLSSEGYAGRG
                     NSASGWKADVSNIDIKGSLLQKNLHLSGNLKADHQQLLDVPGLSLVYGENKIDLKGVL
                     GEKSDFYADIKAPNLQGLVPNLKASVNGNAKLSGKVSEPNIDLDLVASNVGYEQFKLQ
                     NLTAKGKITTEKTIQGDLTLGLRQFAYNEIKVGNATLLLKGNEENHSLKLSAKGNPVG
                     ADLQISGKFDRLKEIWEGQLSQVSIQSTEFGQFQADKAVNVKYDNKAINANISAHCWH
                     NRKINLCFPTAFNAGVEGKVPFEIRNFDLAVLQQFLEKNSQLSGIVNAKGDAAWFKNK
                     QPQVNLDLTSNAIKFIQKMEGGKSFPLTVSPLKIDLKMSDNNLTLKSDLRVENNGRLS
                     TDLVMKDLSKARALSGNIHLDQLSLKLIRPLLERGDSVDGNVNARLTVSGTATSPLLH
                     GNLNVTELKARSVTMPFDITGGNLAMNFHGATSTLSGKLQTKQSELRLEGDADWRDLN
                     AWKTRVHAQANRFQVDIPNIAKVAVSPDIQVTATPTLLTLSGNVDIPWARIEVEQLPE
                     SAVSVSGDEVIMDGSVKNKVPFSQRNIPAQTSGGMAINADIKINIGNDVKLKAYGLNS
                     NVNGLLSVRQGKQGLGLYGQVHLREGRFAAYGQDLLIRKGDISFAGSPSQPTLDIEAI
                     RNPEAMEDPTITAGVRVTGLADNPTVKVFSDPAMSQNEALSYILTGRSLESSGDTSSS
                     NAVAAALLSMSLSKSSKLVGDVGSTFGLKDLSVTTAGIGDNTKVEVSASLAPKFRVKY
                     GVGIFAPLTELTLRYNLTPRLYLQWVSSINQAVDLMYRFEFDELF"
     gene            complement(11780..13615)
                     /locus_tag="PXD69_000547"
     CDS             complement(11780..13615)
                     /locus_tag="PXD69_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HDL6282776.1"
                     /translation="MNTKLHFLTFCCLVAFASMAQANQEQRLSDVDRERVENLQEKLA
                     EDSDDEPEIEPLVTLEVKGIQGKDAKKNVELYLDQIANEYADGSERYQYLVQTTVDKA
                     LRALGYYNSRYQFVQLPQEGKKPLLVLNVELDKETVKIDETDIVLQGDAKTDEDFAHL
                     VSKAPKQGSRLNHKTYDNFKGDIESTAFSKGYFDGHWLYHRLEVYPTDHKADWRLGYD
                     SGKRYHYGQIRFVDSQIKEEYLQNILKIHSGEPYLANDLSILTQDYLSSNWFSSVMVE
                     SHLNEQDKLVDLNVLFQPKKRNEVEIGIGYETEVGPRLQLNWKKPWLNSRGHSIESRT
                     YVSKPEQTFEFGYNIPLREDPLHYYYQLSGTLENEDQNDTKSTAATLGLQRFWTHETG
                     WSFSVGLKARYDSFTQANDRFKTLLVYPTASLNRTRTDGKPYPLWGDTQKLTVNWGSR
                     AVGSDVNFYSYKASTSWARTYFDNHRFYLRAELGYLKANQFERIPPALRYFAGGDMSV
                     RGFGYKDISPRDPSNGKRVGGSHLATGTVEYQYQVYPNWWGAIFYDAGLASNKFKTQD
                     LYYGTGLGVRWASPIGAIKFDVATPVKSPDNSKGIQIYIGLGSDL"
     gene            complement(13627..14472)
                     /locus_tag="PXD69_000548"
     CDS             complement(13627..14472)
                     /locus_tag="PXD69_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDL6282777.1"
                     /translation="MFKQINKRLNFNIFLQMFVLFTPLVQAAQMAIVIDDVGYRIKED
                     REILALPKAVSVAIIPVAPYATERAKDAYNQKRDILIHLPMEPKSKQPIEEGGIHIGD
                     NEEKIRKLIHTSRGQVPYAIGLNNHMGSGATSDSATMQHLLKVLKENTLFFLDSKTIG
                     SSVAAKTARQFGINTLERDIFLDDSDLLADVQKQFAHAINHARKNGVAVVIGHPRKNT
                     ISVLKQNLAQLPQDIELVSVGNLWRNEKTVPDKPFIMLFEQEPALSSVPPYDSIPLLR
                     GIPKE"
     gene            complement(14473..15636)
                     /locus_tag="PXD69_000549"
     CDS             complement(14473..15636)
                     /locus_tag="PXD69_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL6282778.1"
                     /translation="MLVKRINSYCWTAIFSGVISFSTPFSFANNLNQIQQKIQQQTSK
                     INEQKQKRNALQSTLKNQEVEMGKVLDKLQKTEMSLTEVRQTIKATETEIARLEKLEK
                     QQKEKLKEQLDSAYRSGVNPSVLERLMSEEAKNAERMTAYYQHMNNIRIDAIVEIRKT
                     QADLKARRDELKGQQKDHQTQLNEQKKQEKDLKKVQSQRESTLRLIDKTLEQDQSRLE
                     NLRSNEQALKQQLEQAQREAQQAEKREQQREKQAKSGQSKTTENVERTPIKAGRYTMP
                     VSGNIITPFGNNWHGVVIGASAGTSVRAMASGRVIMAQWLAGYGNMVAIDHGNGDISL
                     YGYNQSISVSKGSRVQGGQVIAKVGNSGGQSRSALYFGVTRKGTPINPLNLVK"
     gene            15804..16487
                     /locus_tag="PXD69_000550"
     CDS             15804..16487
                     /locus_tag="PXD69_000550"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDL6282779.1"
                     /translation="MQLVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGQKLKA
                     AGFEFDIAFTSVLTRAIKTCNIVLEESDQLWIPQVKNWRLNERHYGALQGLDKKETAE
                     KYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANLPKDLIPNAENLKITLERVLP
                     FWEDHIAPALISGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYELDDN
                     LKVISKRYL"
     gene            complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXD69_000551"
     CDS             complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXD69_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDL6282780.1"
                     /translation="MINEIKKDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDGIQVEY
                     YGSATPLRQVANVVAEDARTLAVNVFDKSLISAVEKAILTSDLGLNPSSAGTTIRVPL
                     PPLTEERRRDLIKIVKAEGEQGKVAIRNVRRDANDQIKALLKDKEISENEQHKAEEDI
                     QKITDTFIKKVDEVLAAKEKELLDF"
     gene            complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXD69_000552"
     CDS             complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXD69_000552"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDL6282781.1"
                     /translation="MSKPIYKRILLKLSGEALQGSEGFGIDPSILDRMALEIKELLAE
                     GVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAEVNAKLM
                     SAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGSPFFTTDSAACLRGIEIEADVVLK
                     ATKVDGVYDKDPAKYADAKLYNKLTYAQVIEQELQVMDLAAFTLARDHGMPIRVFNMG
                     KPGALRNVVFGTEEGTTISE"
     gene            18041..19603
                     /locus_tag="PXD69_000553"
     CDS             18041..19603
                     /locus_tag="PXD69_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL6282782.1"
                     /translation="MKSKQLFGILVAISLATAASCLMLIGSGFFPNPSIFEVILGVFL
                     IIALASSKWTYYLLLLPISIAYAIYTPVGIKFGKPTYEYIASIFATDMMESKEFIAQL
                     PILNIAAGIAIVLAVIFYRKITNRYQIRFLRNKTFVISAFVLMLFSLAPFKFFQEFYN
                     SSLKVKKELEVLNNLTLDSQWGQSTLSSTSNYDDYVLIMGESARKDYHHAYGYPAANT
                     PFMSSAKGTLIDGLTSGGTNTIASLRLMLTKPDTEKWEANYGLTLIDLIKSTGIKTYW
                     ISNQGYLGNYDTPISSIGNKSDVKIFTKAGDSLNTNVSDFELLPHFAKVIEEPAQGKR
                     FIFLHLYGSHPITCDRLTDYPKMFDDDKLPKRYFNVNCYVSSIKKTDELLKRVYDLLV
                     KNQENHQRSFSMVYLSDHGLSHEVSKENIVIHNGKDRSKLHYDIPLFKISSDDTQRNE
                     YKAFKSGLNFTNGIANWIGIENPLLDKEINLFNEQNDKSDYGLKKIIETQSTVEDPAV
                     PIPESYLYKATN"
     gene            complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXD69_000554"
     CDS             complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXD69_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDL6282783.1"
                     /translation="MAEITASLVKELRERTGAGMMECKKALVEANGDIELAIDNMRKS
                     GQAKAAKKAGRVAAEGVILARVASGFGVLVEMNCETDFVAKDAGFLELANEVADFAVA
                     NKGTTIEALQAQFEEKRAALVAKIGENMNIRRVQYLEGEVIAQYLHGAKIGVLVAGAG
                     SEDELKKVAMHVAASKPEFVNPEDVSADVVAKEREIQIEIAMNSGKPKEIAEKMVEGR
                     MAKFTGEVSLTGQPFVMDPSQSVGQYLKSVNTSVSNFIRLEVGEGIEKVEEDFAAEVA
                     KITGGNA"
     gene            complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXD69_000555"
     CDS             complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXD69_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005645552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDL6282784.1"
                     /translation="MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLE
                     KTLPLFNEALAELTRIASNNGKVLFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQTQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDA
                     IFVIGADHEHIAIKEANNLGIPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAV
                     AAIKEGRGVETVEVAEEASAE"
     gene            21678..22706
                     /locus_tag="PXD69_000556"
     CDS             21678..22706
                     /locus_tag="PXD69_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6282785.1"
                     /translation="MKKTLSALAIAAATFTSTSTLAANEVNVYSYRQPYLIEPMLKNF
                     EKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL
                     EKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSG
                     KNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGN
                     SYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLS
                     GEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNYEAALKLVDEVK
                     FDDFSEKK"
     gene            22829..24475
                     /locus_tag="PXD69_000557"
     CDS             22829..24475
                     /locus_tag="PXD69_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6282786.1"
                     /translation="MRSQFCWKSIAALTTFIVLLPLIAICYHALQGDNENLAHLWQTM
                     LPIYLKNSTLLVLGTVFLALIFALPTAWIVANYRFWGQRTLQWLLCLPLAMPAYLIAY
                     LYTDLLDYSGAFQGWLRSIFGWTHPQDYWFPQIRTLYGACFVLALVLYPYIFLLVRVA
                     LLEQSENLTHSAKMLGASPSQLFRRITLPLIRPSVAVGIALVAMETLGDFGTVAYFAV
                     PTLTTAIYDSWLGYHDLGTASQIAIFMLLMIFLFLSLEQYSRRKQKSYQRGYEKKSAF
                     KFLTGWKLALALAWCWGLLALAFFIPFGRLLYWAYDYFEQAWNLDFVQFSLNSLKVSI
                     IASVITVLIALLLHFSKRLNTRKILVKNDRLSLQLASLGYAVPGTVLAIGLLSPLTFA
                     DHQLHAWLKSLELSPVGLIFSGSLFALVLAYTIRFLAMAIGSLETSLNKISPSLDMAS
                     QTLGKNGSAMLVKIHIPLIYKGILTAGLMVFIESMKELNASLLLRPFNFDTLATYVFT
                     FTSDEQLERAALPAIVLVLVGLLPVIWLTRSLISQSEKER"
     gene            24485..25495
                     /locus_tag="PXD69_000558"
     CDS             24485..25495
                     /locus_tag="PXD69_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6282787.1"
                     /translation="MSVLTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTT
                     LLKAIAGLLPIEQGDIHLAGECLKSKAVEERQIGLIFQDYALFPHLTVADNIQFGLSK
                     LPKVQQKAITEKMLSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFS
                     NIDSQTRYAMIQEIKQILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNE
                     LYHSPVNPFVADFLGGTNYLNCNVTEDNVLCSPIGEFRLFPEMNVQKGRYRWLLRPEQ
                     IILKPNELGLGKVVGKLFLGLYYRYQVEIKGIEIVTYQSQELKIGEQVEVGFQVREFI
                     LF"
     gene            25505..26131
                     /locus_tag="PXD69_000559"
     CDS             25505..26131
                     /locus_tag="PXD69_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HDL6282788.1"
                     /translation="MKIEVWSDYACPFCYIGKRHLEQALAQFEGEVEVVFRAFELDPH
                     ANGEPEGDIQQRLMRKYQKTAEQADEMIRYVEQAGKQAGLDLRYRTTQYTRTFEAHRL
                     AKFAESKDLGEAMVERLFKAYFTDNTILAKRTELISLALDIGLERDEIAQLLTGDDFG
                     HEVREDERVAHKYGIHSVPFFVINEKLGVSGAQPPEILLDAIKQALQK"
     gene            complement(26193..27683)
                     /locus_tag="PXD69_000560"
     CDS             complement(26193..27683)
                     /locus_tag="PXD69_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HDL6282789.1"
                     /translation="MSLYQIARTETGKVISLNAKMANRHGLIAGATGTGKTVTLRKLA
                     ESLSDDGVPVFLVDVKGDLSGSVQAGNFSGKIAERILQFNLGGEDYLKGYPVSFWDVF
                     GTSGIPLRITISEMGPMLLSRLLNLNDTQGGLLNLVFRVADDRGLLLIDLKDLRALLK
                     FVADNAKEFQLEYGHISAASVGAIQRALLRLENEGADNLFGEPALDLHDWIQTRNGRG
                     VINMLNAEKLINSPRVYSAFLLWFMAELFENLPEVGDPEKPTFVLFFDEAHLLFDDAP
                     KALVDKIEQVVRLIRSKGVGVYFVTQNPLDIPDSVLGQLGNRIQHALRAFTPRDQKAV
                     KSAAETFRANKEVNVVEAITQLGVGQALVSVLDEKGMPTPVEIAYIYPPKSQLAPLAT
                     GERDSLVKQDDLYHHYSQYVDNESAFELLNAKAEAIKAEQAAAEEANNDFFGGILSSI
                     FGSKKKKDQSITEQVVSQVAHSVGRNLRNQVTKQIMRGILGAITKK"
     gene            complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXD69_000561"
     CDS             complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXD69_000561"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HDL6282790.1"
                     /translation="MSNHLTEHRFIDFPIHANVLNALDSKGFEFCTPIQAKTFPITLK
                     GKDIAGQAQTGTGKTLAFLIATFNHLLNNEIETSKNQPRALILAPTRELAVQIGADAE
                     LFLKHSDLKLALAYGGDGYDKQVQEIEKGVDILVGTTGRVIDYVKQGIINLDKIQVIV
                     LDEADRMFDLGFIKDIRYLMRKAPKPSERLTLLFSATLSAKVRELAYEDMDNAEYIEI
                     EPLQKTGHRIKEELFYPSNEDKMALLLTLLEEEWPERCMIFANTKHKCEEIWQYLSAD
                     GHRVGMLTGDIPQKKRLSLLDNFTKGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDK
                     EDYVHRIGRTGRAGESGHSISFACERYAVNLPAIEEYIGHQIPVSQYDKESLLTLPKV
                     NRSRSKKTFLAKTKKNSRN"
     gene            complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXD69_000562"
     CDS             complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXD69_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDL6282791.1"
                     /translation="MTIDQWQRAFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRA
                     RSPLKAVLQPFTPLLLRWSGKGDLKTLTKAEPAALTLPMETLSLYSGFYINEVLARVL
                     ENQTAYPELFQHYLRCITELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLPVD
                     PKMTYQFQENQGFIASLLQNNQSFLGSDLLAFAQLDFSEKSTQQAAKRFTRMALKPYL
                     GSQPLKSRELFQSILPNKLKSG"
     gene            complement(30017..30934)
                     /gene="era"
                     /locus_tag="PXD69_000563"
     CDS             complement(30017..30934)
                     /gene="era"
                     /locus_tag="PXD69_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDL6282792.1"
                     /translation="MTEQIQTPAKTYCGFIAIVGRPNVGKSTLLNKILGQKISITSRK
                     AQTTRHRIVGIHTEDQYQAIYVDTPGLHIEEKRAINRLMNRAASSAIGDVDLIIFVVE
                     GTKWTEDDEMVLNKLRSAKAPVLLAINKIDNIKEKEELLPHITELSQKFDFAEILPIS
                     AQRGKNVHILQKFVRQSLRQGEHHFPEEYVTDRSQRFMASEIIREKLMRFTGEELPYS
                     VTVEIEQFKMNERGVYEINGLILVERDGQKKMVIGAGGQKIKTIGIEARKDMERLFDN
                     QVHLELWVKVKAGWADDERALRSLGYMDE"
     gene            complement(31037..31711)
                     /gene="rnc"
                     /locus_tag="PXD69_000564"
     CDS             complement(31037..31711)
                     /gene="rnc"
                     /locus_tag="PXD69_000564"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDL6282793.1"
                     /translation="MQLERLQKKLGYQFHNLDYLIQALTHRSAATKNNERLEFLGDSI
                     LNFTIGKVLYDKFPKANEGELSRMRATLVREQTLAIIARKFDLGDYLKLGPGELKSGG
                     FRRESILSDCVEAIIAAIYLDQDMAKAMEKVEDWYSDLLKDISPGDSQKDPKTRLQEF
                     LQGRKLPLPEYDVLDIKGEAHNQTFRVTCKVINVEEVFIGIGTSRRKAEQNAAEKALA
                     VVKTKK"
     gene            complement(31757..32716)
                     /gene="lepB"
                     /locus_tag="PXD69_000565"
     CDS             complement(31757..32716)
                     /gene="lepB"
                     /locus_tag="PXD69_000565"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDL6282794.1"
                     /translation="MAQFMPIIFLGIIYGIWQWLDSMQLPNTISIILVALVIICGGFW
                     AFYKFSADPRRKQAIVLQQKRLGRELTAEEIAEIQPKSAVGEFFASLFGILFFVTVLR
                     SFLFEPFQIPSGSMEPTLRVGDFLVVNKFSYGIKDPIWQNTLIETGKPERGDVIVFKA
                     PAQPHVDYIKRVVAVGGDKIKYDFATQQLTVTKANGETKVFEYSEGKPNPEFFYHGEM
                     QVERTEKGNVTHQILNHPMAFNYAPYFYQQEGQAEGEWVVPQGYYFVMGDNRDNSEDS
                     RFWGFVPERNIVGKATFIWLSLDKKANEFPTGLRFSRMFTSIN"
     gene            complement(32803..34596)
                     /gene="lepA"
                     /locus_tag="PXD69_000566"
     CDS             complement(32803..34596)
                     /gene="lepA"
                     /locus_tag="PXD69_000566"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018345454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDL6282795.1"
                     /translation="MQNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLNYKAKDGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAIEIDLEVVPILNKIDLPAAEPERVAEEIEDIVGIDAIDAVR
                     CSAKTGLGIEDVLEEIVKKMPAPEGDAEAPLQALIIDSWFDNYLGVVSLVRVKNGVLK
                     KGDKIKVMSTGQSYNVDRLGIFTPKQVDTTELKTGEVGWVVCAIKDILGAPVGDTLTH
                     HHNPATEVLPGFKKVKPQVYAGLFPISSDDYEAFRDALGKLSLNDASLFYEPETSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVVQTSGETIYVDSPSKLPA
                     INNIAEIREPIAECNMLVPQEFLGNVITLCVEKRGVQTNMVYHGNQIALTYEIPMGEV
                     VLDFFDRLKSTSRGYASLDYGFKRFQTADMVRVDIMINGERVDALAIIVHRANAAYRG
                     RELVEKMRELIPRQQFDIAIQAAIGNHVIARSTVKQLRKNVLAKCYGGDVSRKKKLLQ
                     KQKEGKKRMKSLGNVEVPQEAFLAILHVGKD"
BASE COUNT         9971 a         7599 c         6446 g        10778 t
ORIGIN      
        1 gtaatgtccc ttttttgaat gtctactaca aaatgggata ttttacaaac cgattgacta
       61 atgaagcaag aatataatta actacaactg gatatatttt gcaaatttcc cgataaattt
      121 caccgcttgt agataaaaac cgtagataaa aaccatagat aaaaaatagg agctaaacat
      181 ttttagcccc taccgtcatc agaaataaat cccgactaaa atcgccacga acacacctaa
      241 gccgaaatag tggttattta gaaacgcttt aaagcattcg ctacgttctc tttttttggt
      301 cagccaacat tggtagataa acagcgtggc acttaaggct aatacgacaa aatagccgat
      361 gtgataatct tttaccacgc ccaataaccc caataaaatc aaggtgataa actgtaataa
      421 cgcaataatt ttattatcgt attgagcgaa taaaattgca gtggatttaa ctccaattcg
      481 taaatcatcg tcacgatcaa ccattgcata ttgggtgtcg taggcgactg tccacgctag
      541 attggcaaaa aacagcagcc agcattcaag tggaagagtt tccgttaccg caccaaatgc
      601 catcggaatc gaccaaccga atgccattcc aagcactact tgtggcaagt gggtaaaacg
      661 cttcataaag ggataaatca ccgccagaaa aactgccaca aaggaaagca gaaacgcata
      721 gcggtttagc attaaatcga gcagaaaagc gaacaacagc aagatggcaa aaatgacttt
      781 tgcctcagtg gtggtcactc tgccggtagc taatgggcgt tgagaggtgc gtttaacgtg
      841 tccgtcaatt tctctatcgg cataatcatt aatcacacaa cctgccgcac gcataacgat
      901 taccccaagg gtaaaaatgg ctaaaatcgc aacaggcggc attccctctg cggcaataaa
      961 taacgcccat agtgtggggt gtaataataa taacgtgccg atgggtttat cgaaacgcat
     1021 taactgggcg taggcaatcc atttttgttt agaaaaaaga gtttcgttat tcattacaaa
     1081 ttttgacgat aacgtccgat tggcttaaat gagtctgtaa ttctaacggt aaatcttgat
     1141 ctgtaaacaa ataatttact tctttaacat ttcctaaacg tgcaatagct gtacgggtaa
     1201 actttgaatg atcggtcact aaaaccactt gtcgggaaca ttccattaat gcacgcttta
     1261 cctgcacttc gtggtaatcg taatcgagca tagagccgtc catatccacc gcactaatgc
     1321 ctaaaatccc aaagtccaaa cggaattggt taataaagcg aaccgtttct tctccgatta
     1381 gcccgccatc acttcttagc cctccgcctg ctaccgtaat ttggcaatct tcattttgca
     1441 tcagaatatg agccgcattt aaattattgg taactacttt taaattttta tgcgaaagta
     1501 aggctaatgc cactgcttct gaagtcgtgc caatatctaa aaataatgat gctccatttg
     1561 gaatcagttt tgccacctgt tgggcaatcg catttttctc gtgtgagaaa aattgcttgc
     1621 ggtgggtgta atcactattc tccgtattgg aaggagcggc tgccccaccg tgatgacggc
     1681 gaatcagatt attttctgcc atttcattca gatcacggcg aatggtttgc ggactcacat
     1741 tcaattcagc cactaattgc tcggtactca catagccaag ctgattaacc agctcaatga
     1801 tctttttgtg tctgtttgcc tgtttcatat ttcctctttt gcaaataatt tgcagaaaaa
     1861 gaccgcttgc aagcggtctt ttttcagtta aattttacaa tttatcaaca agttcaaccg
     1921 catagccgat atagcttgcc ggtgtcatct ctttcaaacg atttttttca ttttccggaa
     1981 tttccaactt atcgataaac tcacgcattg cggtttcatc aacccgtttg cctcgagtca
     2041 gctctttaag tttttcatac ggtttttcaa tgccataacg acgcataaca gtttgaattg
     2101 gctctgccaa tacttcccag ttttggttga gttcatcacg caagtgttgt tcattcactt
     2161 ctaatttgct aatacctttt aaggtggacg cataagcaat taacgcataa cctaaaccta
     2221 cacctaaatt acgcaacacg gtggagtcag ttaagtcacg ctgccagcga gaaatcggca
     2281 atttttgccc caaatgagcc attaccgcat ttgccaagcc aagattgcct tcggaatttt
     2341 caaaatcaat cgggttcact ttatgtggca ttgtgctaga gccgatttca ccggcaatag
     2401 tgcgttgttt gaagtgattt aaggcaatgt agccccacat atcacgatca aaatcaatta
     2461 aaatcgtatt aaaacgagcc acgcaatcaa agaactccgc aatataatcg tgcggttcaa
     2521 tttgggtggt gtatgggttc cacgtcacac ctaacgattc cacaaattct tggctgaaag
     2581 tgtgccaatc aatctccgga tatgctgata aatgtgcgtt atagttgccc actgctccat
     2641 tgattttagc gagaatttct aaattttcta actgtttata ttggcgttgt aaacgatatg
     2701 ccacatttgc catctcttta cccattgtgg tcgggcttgc cggctgaccg tgtgtgcgag
     2761 aaagcaacgg aatatgttgg taacatttcg ccagctctgc tacagcatca atcacttttt
     2821 tccattcagg taataatact tcttcacgag cggttttaag cattaaagcg tgcgaagtat
     2881 tattgatatc ttcagaagta caagcaaaat gaataaattc attcaccgct tgtaattcag
     2941 gcaacgcttc acatttctct tttaggaaat actccaccgc ttttacatcg tggttggtgg
     3001 tacgttcaat cgttttaatc cgattggcat cttctaacga aaaatcagcc acaatttggt
     3061 ttaggtaatc gtttgctttt tcagaaaaca ctggaacttc attaatttgt gtatgcgatg
     3121 ccaatttttg taaccagcga acttccaccg tcacacggaa ttttaataag ccaaattcac
     3181 taaaaatcgg acgaaggctc gcaactttgt cttgataacg tccatcaatc ggggataacg
     3241 cagttaaagc ggtaagttcc attgttttat attctccaaa taggtaaatg ttcggttaga
     3301 tttgacgata aaatttctgt gcttggttaa aaattttctt gcgtgaaaat aaaaattgcc
     3361 aacggcttcc gccgacttgc tgccacaaaa taccggctcg aataccggct agtagcgagg
     3421 ctcgaatttt attctgtata tccgggcgaa ccaagtaatc ttgcattccc atcacgtgaa
     3481 ttttcgtacc taacgggctg ataatatcgc tataaatagc ggctaaattg gcaatcattt
     3541 gatctgccat cacattatct tcatacaggg ctaactggcg ttccacttgc tgtaaacgct
     3601 gggctaactg ttgttttgct tcagggtttt tattgagttt ttggctaagg gcgagcaggc
     3661 ttatccaata acgtccgact tcggtatcta atttgccgtt accgccgcca gtttgagcta
     3721 atgcggtttc taagcccatt tttaaatggg aaagatcatc gccaaataca cttaacgttg
     3781 attccggctg agtgattaac aggctttcta aagcacactt aaaagcctct ctgtctgcca
     3841 tgcctttatg tgcaaattgt tgcactaacg tcgccgcttg gcaaacgccg gcataagcaa
     3901 gggtaatatc gtggtaatcc gccatctctg taaaattcaa tatgataaaa cattagtggg
     3961 aatatagcat tttttcagct tcttttgaat ggcaaaaggc atttattcta ttgaaaaata
     4021 aatgcctttt cattaatacg caatttgctg caaaaactat cctaccaatc gcccattatc
     4081 tattcgataa accacatcaa atttatccag tccgctttgg cggtgagtga tcataattaa
     4141 ggtgcgatca cagcagtgag tcaaaattag gtttaaaatc tgctgttcgg tttctctgtc
     4201 cagtccttct gttggctcat caagtaagac taattcagca gaactcagga gcaaacgggc
     4261 aagccctaaa cggcgttgtt cgccaccaga aagcggtctg ccgccctcgc ctaaccataa
     4321 atttaagccg tctgtttcaa gcaaatgccc taagcctact tttcttactg cttcttgcat
     4381 ttgttcgtct gtagcttgag cattccccat taataaatta tcttttaggg tttggctaaa
     4441 aatatgcact cgttggctta aggtaactaa ttttgagcgt aacatcggct ctgaatattc
     4501 gtcaatttta caattattca gccaaatttg accgcttgta gggtcgtagt tgcggtttaa
     4561 cagttggaat atggtcgatt ttccgctacc cgttttacct aagattgcca ctttctgccc
     4621 ttttaatacc ttaaaggaaa gattatttag tacgttttgc tcgccgtaat aagcaaagct
     4681 cacgttttca cagcgtacaa gcggttgatt ttggctcaaa ttttgccatt ctgccttgct
     4741 accaaatgtt acattaggct gttgttcggt aatttcacta atccgctcgg cggcggtaat
     4801 cacttgccct aaatgcaaaa aggcgatacc aatcggggaa agaatctccg ccgatgccat
     4861 tacacagaaa atcactaacg caattaaggc ttcagggtat tttgcagtgg gcacattaat
     4921 cgaagttgaa accaaataga tcaccacaca agtcaaaatg ccgttggata acattatcaa
     4981 gctatttgat aagccggaca gtcggctttc tttgctttga gcgttcagcc attgttgttc
     5041 agtttgctgt agtttttcgc tcatttggtt caagttgcca aagagtaaaa attctgcatt
     5101 taactgtacc cactcaataa attggctgcg gtaatttgct cggctttgta ttgcattacg
     5161 ccctaatttc aaacccaatc gataaaatac ggtaggaata acggcaagca ataccaatag
     5221 tgtgccgcaa atgatcagca ttaatggcac ggaaacaaaa gaaagcccga ttgccataaa
     5281 tgcaataatc atcactgcac tgacaaaagg cgagactaaa ttcagatata gggtgtctaa
     5341 cgtatccaca tctgccacca agcggtttaa caattcgctg tttctaaagc gatttagccc
     5401 gcttggactc agtggaatca attttttaaa gacgctagca cgcaaattcg ccaatacccg
     5461 aaaagtcgca tcgtgggtga ctaaacgttc aaagtaacgt gaaattgtcc gccctactgc
     5521 caaccctctc acccccgatg aagggtagaa aaagttaaaa ataagcgcat tgccggctag
     5581 aaatgaggca gctaaaaacc aaccggaaag gctgagcaaa ccgatacttg ccgctaatcc
     5641 taaaattgcc agcacaacac ctaataatag tcgcccaaaa tgggtttggt agagagcaaa
     5701 aaacgggaac aacgatttca ttagatttct ccctgatgca ctaattcatt atgtattaat
     5761 tccgcaaaaa agccggtgtg ttctaattca gtgaaacgac ctttctgaat gatttgccct
     5821 tgtttcatca cccaaatttc atcgcattgg gttaaatctt ccactcgatg agtaatcatt
     5881 agcgttgttt gctctcggct gagattatgc agagcggcta acacttgctg ttccgaatcc
     5941 atatcaaggc ttgcagtcgg ctcgtctaac agtaataatt cgtacgggcg aagcaacgct
     6001 cgtgcaatcg caatccgctg tgcttgcccg ccagagatac cgatattact gtcttgcact
     6061 tgatgctcca accctaaacg tgccacaaat tcatcggctt ttgaaagctg taatgccttg
     6121 gctaattcag aatctgtcgc attagggttg cctattaaaa tattctcttt caaactgcca
     6181 tgcattaatt gcggattttg ccccacccac gctaatttcg ctcgccattg gcttaaattt
     6241 aaatctcgca gttcggtgcc gttaatcgta accgaccctt cataaggcaa gaaaccaagt
     6301 aacatattca ttaatgaact ttttcctgca ccactttgcc caaccaaagc gatatgttgg
     6361 tgtgcattca actcgaaatt taacgcttgg gttaaggctt tgccttgtgg tgagaagatc
     6421 acgcaatctt tggcttgaat cacaagcggt tgattttcaa cattttcttg caaattgcca
     6481 ccttgcgttt tcaccttttc ttttaagaaa gtttcgatat tatctgcggc actaatcgct
     6541 gctgccttgt cgtgataaaa cacgccaagt tcacgcatcg gttggtaaaa ctcaggtgcc
     6601 accattagac aaaagaagcc gataaataag gtcacgcccg taccataata gccaaaatcc
     6661 agctcaccta aaaaaataaa gccaaaatag accgccgtca ccgcaatcga taccgccgtg
     6721 aaaaactcca ataccgcaga ggataaaaac gccattttta gtacgtccat cgtactgatt
     6781 cggaaatctt cggtgctttg gtagatttgt tcagtctgct tttccgcttg cccaaataag
     6841 cgaatggttt ctaaaccttt taatttatct aagaactgtc cgctaatacg ggaaagaatg
     6901 ccgatattac gctgatttgc ctccactgct ttcattccgg ctaaaatcat aaataaaggt
     6961 aataatggca ttgttgcaaa taaaatagcc cctgctgccc agttaatcgg gaatacaaaa
     7021 cagaggatca gtaatggcac tatcagcgat aaaaattgct gtggcaaata gcgtgcgtag
     7081 aaattatgta gattttccac ctgctcgagc attaaggttg cccagctgcc cgccggtttt
     7141 tgttgaatgc tcatcggccc gactgcttcc attttggcta gaatttggcg gcgaagatgt
     7201 aaacgcaagg tttgccctgc tttgaaaccg acacgctcac gcagaaaaat gaagaatgct
     7261 ctggcagcaa aacaacagaa taagagcata atttcaacca gaaagctatt cggtgactgc
     7321 tttccgataa gcattttgtc taacattgtg gcaatcagcc acatctgtcc aatcatacat
     7381 aaactactga aactccctaa cagtatgttt aagtgcatat attttttgat gactttttgc
     7441 tgacttttaa gccatttttg taattcgcgt tggcgttgtt tttccataat tttgtcaatt
     7501 tttttgtttt ttcaaccgct tgtaaatcgg gtttgccatt ctactataaa gcaaaaaggt
     7561 tgttaatggc gaaacattaa caacctttca ttcagcctta actagaatag ctcgtcaaat
     7621 tcaaagcgat acattaaatc taccgcttgg ttaatacttg agacccattg taagtacaat
     7681 cttggcgtta aattatagcg taaggttaat tcggtaagcg gtgcaaaaat gcccacgcca
     7741 tacttcactc tgaatttagg ggcaaggctg gcacttactt ctactttggt gttatcgcca
     7801 atacctgcgg tggtcacgct taaatctttg agtccgaaag tgctaccaac atcacccacc
     7861 aatttactgc tttttgataa gctcatactg agtaatgccg ctgcgactgc attactggag
     7921 ctggtatcgc cactgctttc caatgaacga ccagttaaaa tataggaaag tgcttcattt
     7981 tgcgacattg ccggatcaga gaatactttt accgttggat tgtctgccaa accggtcact
     8041 cttaccccag ctgtaatggt cggatcttcc attgcctccg gattgcgtat agcttcaata
     8101 tctaaggttg gctgagacgg tgagccggca aaactaatat cacctttacg aatcagcaag
     8161 tcttgaccat aagcggcaaa tcgtccttca cgcaaatgaa cttgcccgta aagccctaaa
     8221 ccttgtttgc cttgcctgac agacaataag ccattcacgt tactgtttaa accataggct
     8281 ttgagtttga catcattacc gatgttaatc ttaatatctg cattaattgc cattccacct
     8341 gaggtttgag ccggaatatt acgttggcta aacggcactt tatttttcac agagccgtcc
     8401 ataatcacct catctccact tacactgacc gcactttcag gtaactgctc gacttcaatt
     8461 cttgcccaag ggatatctac atttccactt aaggttaaaa gagttggcgt tgccgtcact
     8521 tgaatatccg ggctaactgc cacttttgcg atattaggaa tatccacttg gaaacggtta
     8581 gcttgagcgt gaacccgtgt tttccacgca tttagatctc gccagtctgc atcaccctcc
     8641 aaacgcagtt cgctttgttt ggtttgtaat ttaccgctta aagtcgatgt tgccccgtgg
     8701 aaattcattg ctaaattccc acctgtaata tcaaacggca ttgtaacaga gcgagctttt
     8761 aactctgtaa cgtttagatt tccgtgcaat aacggagagg ttgcggtgcc gctcacggta
     8821 agacgagcat tcacattgcc atcaaccgaa tcgccccgtt caagtagcgg tcgaatcagc
     8881 tttaagctta attggtcaag atgaatattg ccggataacg cacgagcctt acttaaatct
     8941 ttcatcacta aatcagtcga aagtctgccg ttattttcga cccttaaatc agatttaagg
     9001 gttaaattat tgtcagacat tttcagatca attttaagcg gtgaaacggt gagtgggaaa
     9061 ctttttcccc cctccatttt ttgaataaat ttaatcgcat tagaggttaa atccagattc
     9121 acttgaggct gtttgttttt aaaccaagct gcatcgcctt tggcattcac aatccctgaa
     9181 agctggctgt ttttctccaa aaattgttgc aataccgcta aatcaaagtt acggatttca
     9241 aaaggcactt taccctcaac accggcatta aatgcagtcg ggaaacaaag attaattttc
     9301 cggttatgcc aacaatgtgc ggaaatattg gcgttaatgg ctttattgtc atatttcaca
     9361 ttcactgctt tatctgcttg gaattgacca aactcggtgg attgaatcga aacttggctt
     9421 aattgccctt cccaaatttc tttcaaacgg tcaaattttc cagaaatttg caaatcagca
     9481 ccaaccggat tgccttttgc acttaatttc aagctatgat tttcttcatt tccttttagc
     9541 aataaagtgg catttcccac tttgatttca ttataggcaa attgacgtaa ccccaaggtt
     9601 aaatcccctt gaatggtttt ctcagtggta attttgcctt ttgcggttaa attttgcagt
     9661 ttaaattgct catagcctac atttgaggcc actaaatcta aatcaatgtt aggttctgaa
     9721 accttacccg ataatttggc attaccattc acgctggctt ttaaattcgg cactaaccct
     9781 tgcaaattag gggctttaat atccgcatag aaatcagatt tttcgcctaa cacgcctttt
     9841 aaatcgatct tattttcacc atacaccagc gataagcccg gaacatctaa aagttgttga
     9901 tgatcggctt ttaaattacc gcttaagtgt agatttttct gtaataacga acctttaata
     9961 tcaatattcg agacgtccgc tttccatccg ctagctgaat tgccccgtcc tgcataacct
    10021 tcggaagata aagaaccgga caataccgcc ggccagtctg ccagtaggga tttagtgtta
    10081 atatgctgaa gtttcaaatt tgaacgccac gcaacgccct cgctccaatc cactaaaccg
    10141 tcgatcttcg ccgtaccttc cagcgtattg agacttaaat cttgtatatt aaaatgggtt
    10201 aattcccctt tgccagttaa actagccgag cttgcaggca cgcccattcc tttggcactg
    10261 actttagcct ccaaagcgta atccaggaga ttgccattaa gcctcatggc gatattctct
    10321 aaactcagca catcaccatt ttgctgagga gcaaacggat aacgcattga ctcactcttc
    10381 agcgataaat caaagggagt tttcgcctga gccagtgcaa cattgccctc caacgaggcg
    10441 ctaattgcac cagccgtctt cacttttagg ctggttttgt catatagctc accggaaaga
    10501 gaggcttcaa tttgattgaa cggcaatttt actttcgccg tttttgcctc gtgaccactt
    10561 agcgtccaac ttagcggata attatcttgt aacgataaag aaccgcttgc ggttagatcc
    10621 ccttggtcgc ttttgaaatc taaacttttt aggttgatat gctgatcttt tgcttgagcc
    10681 tgaagctgta aagaggcaac atttaacaat gagatcggct caatcaaatt ccctttttca
    10741 tctttagctt tttgagcaat cgctacattc gcaatatcaa tctgttcaat attgagatca
    10801 agaggcaaac taaagcgaat atttttatcc aataacggct gtgctaattg tgctttaatc
    10861 gctgcccaat ccactttatt atccacctgt tcggcctgtg caacagtttt tctctgtaat
    10921 tggtgaaagc cctctacgac tttttcactg gttttttcca ccgcctcttg aatcacttta
    10981 tcagcaatct cttgtggatt tgtcgctgat aacgcctctg tttttgcatt tttttgtgca
    11041 aaatcgaccg cttgttcagt atcagtttcg tctaacttta aggctaaaag cagatttagc
    11101 ccctctaact gtgtcgggtg aacggtaata gcccgccctt taccagaaag tgcagtgtgg
    11161 aaatgattaa gatgaatatc catatcatca actttgacct tgatattctc taaattgata
    11221 ttttgagctg aaatccccaa tggcaaattt aattcggtga aaggttcggt ctcttctttt
    11281 ggctgagaag ggggtaattt agtcgtatca atcaacacct ctgtatcttt aaggctgaga
    11341 ttattcaaac acatttcata gtggagcaag cagctaaaac caatatgcag atctgcttgc
    11401 ccaaccgtta cattcacacc gtccatcaca aatcgggcat cagaaagctg taacccatct
    11461 tgcaggctac cttgcacttg cccaagttgt aatggctcta cgaatttatc tacccagctt
    11521 aacactttac gttgcccgta acctgtgcat agaaagagaa tggcgagtaa aagtagaata
    11581 aacgtcagac aaaagccgtg cttcaaaaac cgccactttg attttttagg ctgtgttgct
    11641 tgtggctctt gtgctgagtc cgtttgattt gtggctgttt gtttattttc gtcagtcata
    11701 atcgtgcata tttatgaggt gataaaaagt aaacaagcgg tatgcgaaat tttactgaaa
    11761 ttcgaccgct tgttttcatt tacagatcgg aacctaaacc aatataaatt tgtattcctt
    11821 tggaattatc tggtgatttt accggcgtgg cgacatcaaa tttaatcgcc ccgataggtg
    11881 atgcccaacg cacccctaag cccgtaccgt agtagagatc ctgagttttg aatttattcg
    11941 atgccaagcc tgcatcataa aaaattgcac cccaccaatt agggtaaacc tgatactgat
    12001 attctactgt gcctgtggct aaatgagagc ctccgacacg tttgccatta ctcggatcac
    12061 ggggggaaat atccttatag ccaaagcccc gcacactcat atcgccaccg gcaaaatagc
    12121 gtaacgccgg tggaatacgt tcaaattgat tggctttcaa ataccccaac tccgccctta
    12181 aatagaaccg atggttatca aagtaagttc tcgcccaaga tgtcgaggct ttataactat
    12241 aaaagtttac atctgaacct actgcacgac tcccccagtt taccgttaat ttttgtgtat
    12301 ccccccataa tgggtaaggc ttgccatctg ttctggttcg attcaatgat gccgttgggt
    12361 aaactaataa ggttttaaat cgatcattag cttgagtaaa agaatcgtaa cgggctttta
    12421 aaccaacaga aaatgaccaa ccggtttcgt gagtccagaa acgttgtaag ccaagggtgg
    12481 cagcggttga ttttgtatcg ttttgatctt cgttttctaa agtgccggat aattggtaat
    12541 aataatgtag cggatcttct ctaagtggaa tattataacc aaattcaaat gtctgctccg
    12601 gcttagaaac gtacgttcgg ctttcaatac tatgacctcg gctatttaac caaggtttct
    12661 tccagttaag ctgtaacctt gggccaactt cagtttcgta gcctatccca atttccactt
    12721 cattgcgttt tttaggctga aataacacat ttaaatccac taatttatcc tgttcattta
    12781 aatgtgactc aaccatcact gatgaaaacc aattactgga aaggtaatct tgggttaaaa
    12841 tcgaaagatc gttagctaaa tatggctcac cggaatgaat tttaagaata ttttgcaaat
    12901 attcttcttt gatttggcta tcaacaaacc ggatttgtcc ataatggtat cgttttccgc
    12961 tatcatagcc taaacgccaa tccgctttat gatcggtcgg ataaacttcc aaacggtgat
    13021 aaagccaatg accgtcaaaa taccctttac taaaagcggt actttcaata tcacctttaa
    13081 aattatcata ggttttatgg tttaaacgac taccttgttt tggggcttta ctgactagat
    13141 gagcgaaatc ttcgtccgtt tttgcatcgc cttgcaaaac aatatcggtt tcatcaattt
    13201 ttaccgtctc tttatctagc tcaacattta atactaagag cggtttcttt ccctcttgag
    13261 gtagctgcac aaattggtat cggctattat aatagcccaa ggctctcaga gctttatcta
    13321 ctgtggtttg caccaaatat tgataacgct ctgaaccatc tgcatattca ttggcaattt
    13381 gatctaaata tagctccaca tttttcttgg catctttacc ctgaatgcct ttgacttcta
    13441 aagtgactaa tggctctatt tctggctcat catcactatc ttccgctaat ttttcttgca
    13501 gattttcaac tcgctcacga tctacgtcag acagcctttg ctcttgattt gcttgtgcca
    13561 ttgaagcaaa agccactaaa cagcagaatg ttaaaaaatg tagttttgta ttcattagta
    13621 acctttttat tcttttggaa tgccacgcaa aagcggaata ctgtcataag gcggaacaga
    13681 acttaacgct ggctcttgct caaagagcat aatgaatggt ttgtcaggca ctgttttttc
    13741 attacgccac aagtttccaa cactcaccaa ttcaatatct tgaggtagtt gtgctaaatt
    13801 ttgcttcagt acactaatcg tattcttgcg agggtgtcct atcaccaccg ctaccccgtt
    13861 ttttcgtgcg tgattaattg catgtgcaaa ctgtttttgt acatcagcaa gcagatcgct
    13921 atcatctaaa aaaatgtctc tctccagcgt attaatacca aattgacgag ccgttttagc
    13981 cgccacacta ctgccaatag ttttactgtc taaaaagaaa agcgtatttt cttttaacac
    14041 tttcaacaaa tgttgcattg tagcagagtc tgaagttgct ccactgccca tatggttatt
    14101 taaaccaata gcatatggta cttgaccacg agaagtatga ataagtttcc gaattttctc
    14161 ttcgttatca ccaatatgaa tacccccctc ttcaattggc tgtttcgatt taggttccat
    14221 tggcaaatga atcaaaatat cccgtttttg gttataagcg tcctttgccc gttctgttgc
    14281 atagggtgca acaggaataa tcgccacgct taccgccttg ggtaaggcta agatttctcg
    14341 atcttctttt attcgatagc ccacatcatc aattacaatc gccatttgag ctgcttgtac
    14401 aagcggtgta aaaagcacaa acatttgcaa aaaaatgtta aaattcaacc gcttgttaat
    14461 ttgtttaaac atctatttca ccaaatttag aggattaatc ggcgtgcctt tacgggtaac
    14521 accaaaatag agtgcagaac ggctttgtcc cccactgtta ccaaccttcg caataacctg
    14581 tccgccttgc actcggctac ccttgctgac tgaaatagat tggttatagc cataaaggga
    14641 aatatcacca ttgccgtggt caatcgcaac catattgcca taccctgcaa gccattgagc
    14701 cattatgact cgcccgctcg ccattgctct aaccgaagta ccggcagaag caccaatcac
    14761 tacaccgtgc caattattac caaaaggagt gataatattg ccagacaccg gcatcgtata
    14821 tcgaccagcc ttgatcggtg ttctctcaac attctcagtt gttttggact gaccggattt
    14881 tgcctgtttt tcccgctgtt gttcacgttt ttctgcttgc tgagcctctc tttgcgcttg
    14941 ttctaattgt tgttttagtg cctgttcatt gctgcgtaaa ttctctaatc ggctttgatc
    15001 ctgctcaagc gttttatcga ttaaacgtaa ggtactttca cgctggcttt gtactttctt
    15061 taaatctttc tcttgtttct tttgttcatt aagttgcgtt tgatgatctt tttgctggcc
    15121 tttcaattca tcacgtctgg ctttaagatc agcttgggtt ttacgaattt caacgatcgc
    15181 atcaatgcga atattattca tatgctgata ataagcggtc attctttccg cattttttgc
    15241 ctcttcagac attaaacgct ctaagaccga agggttcacc ccagaacggt aggcagagtc
    15301 caactgctct tttaattttt ctttctgctg tttttccaac ttttctaaac gggcaatttc
    15361 agtctcagtc gctttaatgg tctggcgaac ttccgttaaa gacatttcgg ttttttgtaa
    15421 tttatccaac accttcccca tttctacttc ttggtttttt agggtagatt gcaacgcatt
    15481 acgtttttgc ttttgttcat taatttttga ggtttgctgt tggatttttt gctgaatctg
    15541 attaagatta tttgcaaaag aaaaaggggt agaaaagctt attaccccac tgaaaatagc
    15601 agtccaacag taagaattta ttcgtttcac cagcatacct ttgtttcttc aaaatattat
    15661 taaggttata ttctaatcgg ttatttgctt aagatcagct ttttagtgaa agaatttaac
    15721 tatctatttc aaaatataaa gaattttgct ataaatagca caatttcaaa tccattaatt
    15781 ttactcaaag ctaaggagtc attatgcaat tagtatttat ccgtcacggt ttcagtgaat
    15841 ggaatgctaa aaacttattt accggttggc gtgatgttaa tttaacagaa cgtgggattg
    15901 aagaagcaaa atctgccggt caaaaattaa aagcagccgg ttttgaattt gatattgcgt
    15961 ttacttcggt tttaacccgt gcgatcaaaa cttgtaacat cgtattagaa gaatcagacc
    16021 aattatggat ccctcaagtg aaaaactggc gtttaaacga gcgtcactac ggtgcattac
    16081 aaggtttaga caaaaaagaa actgctgaaa aatatggtga tgaacaggtt cacatctggc
    16141 gtcgttctta tgacatctct ccaccggatt tagacccaca ggatccaaac tcagcacata
    16201 acgaccgccg ttatgctaac ttaccaaaag atttaattcc aaatgcagaa aacctcaaaa
    16261 tcacccttga gcgtgtgtta ccattctggg aagatcatat tgcacctgca ttaatttcag
    16321 gtaaacgcgt attagttact gctcacggta actcattacg tgcattagca aaacacatcg
    16381 aaggcatttc tgatgcagac attatggact tagaaatccc aaccggtcag ccattagtgt
    16441 atgaactaga tgacaactta aaagtaatca gcaaacgtta cttataattg gtaaatttcc
    16501 gataaaaaat aaccgcttgt agtgcaacac attacaagcg gttatttttt gttaattttt
    16561 tgcaaatggc aaagaacaaa aataaaggcg aatcatacat tcgccttatt gttttaaagt
    16621 agattagaaa tctaacaact ctttctcttt tgctgctaat acttcatcaa cttttttaat
    16681 gaaggtatcg gtgatttttt gaatatcttc ttcagctttg tgttgttcgt tttcgctgat
    16741 ttctttatct tttaataacg ctttgatttg gtcattagca tcacgacgaa cattacgaat
    16801 tgccactttg ccttgctcac cttctgcttt aacgattttg attaaatcac gacgacgttc
    16861 ttccgttaat ggtggaagcg gaacacgaat ggttgtgccg gcagaagatg ggtttaaacc
    16921 taaatctgag gttaaaattg ctttttctac cgcagagatt aaagatttat caaatacgtt
    16981 taccgctaaa gtacgggcat cttcagctac cacgttcgct acttgacgta atggagtcgc
    17041 agagccgtaa tattccactt gaataccgtc taataaagaa ggttgggcac gacctgtacg
    17101 aattttcgca atatgccctt ttaaagcctc aaggcttttt tccatacgat cttgggtatc
    17161 tttcttgatt tcgttaatca ttgatttttt atccttttat ttagtaactg agagttaaac
    17221 agagaaaatt aattattcag aaatggttgt accttcttca gtaccgaata ccacattgcg
    17281 taacgccccc ggtttgccca tattaaagac acgaattggc attccgtggt cacgagcaag
    17341 cgtgaatgct gctaagtcca ttacttgtaa ttcttgctca ataacttgcg catacgttaa
    17401 tttattatat agttttgcat ctgcgtattt tgctgggtct ttatcataaa cgccatcaac
    17461 tttagttgct tttaatacca catcagcttc aatttcaata ccacgcaagc aagcagctga
    17521 atcggtggta aagaacgggc tacctgtacc ggcagagaaa atcaccacac gtttttcacg
    17581 caacatttta attgcttcag accagttgta agtgtcgcaa atcccattta attggaacgc
    17641 agacattaat ttagcattta cctctgcacg gtgtaaggca tcacgcatag ccaaaccgtt
    17701 cattacggtg gcaagcatac ccatatggtc gcccactaca cggttcattc ctgctttggc
    17761 taattttgca ccacggaata agttaccgcc gccaagtacc acaccaacct caacgccttc
    17821 agcaagtaat tctttaatct ctaacgccat acgatccaaa atagacgggt cgataccaaa
    17881 accttcactg ccttgtaggg cttcaccact taatttgaga agaattcgct tataaatagg
    17941 tttgctcatt ttaattgcct cttaactgta tggactaaac acaaaattac gttattatag
    18001 aacaatccaa tataacgata aactaaaaat attcactaca atgaaatcca aacaactttt
    18061 cggcattctt gtcgctattt cgctggcaac tgctgctagc tgtttaatgc taatcggatc
    18121 aggctttttt ccaaatccga gtatctttga agtcattttg ggcgtattcc tcatcatcgc
    18181 tcttgccagc tctaaatgga cttattattt actcttactg ccaatcagca tcgcttatgc
    18241 aatttatacc ccggttggga taaaattcgg taaaccgact tacgagtata tcgcctctat
    18301 ttttgctacc gatatgatgg aaagcaaaga gtttattgct caactgccga ttttaaatat
    18361 tgcggcgggc attgcgattg tactagcggt cattttttat cgaaaaatta ccaatcgcta
    18421 tcaaatccgt tttttacgca ataaaacatt cgtgatttcg gcttttgtat taatgctgtt
    18481 ttcccttgca ccgtttaaat tttttcagga gttctacaat tcgagcctaa aggtaaagaa
    18541 agaattggaa gtgctgaaca atttaacgct agattcacaa tggggacaat caaccctcag
    18601 ctcaacttca aactacgatg attatgtact gattatgggc gaaagtgcga gaaaggatta
    18661 tcaccacgcc tatggctatc cggctgccaa tacgcctttt atgagttcgg caaaaggaac
    18721 cttgattgac ggtttaacct ccggtggcac aaacactatc gcctcattac gcttaatgct
    18781 cactaagccc gatacggaaa aatgggaagc aaattatggg ttaaccttaa ttgatttaat
    18841 caaatctacc ggtatcaaga cctattggat ctcaaatcaa ggctatttgg gcaattacga
    18901 tacgccgatt tcctctatcg gtaataaaag tgatgtcaaa attttcacta aagccggcga
    18961 ttcattaaat accaatgtga gcgattttga attgttaccg cattttgcta aagtgattga
    19021 agaacctgct caagggaagc gtttcatctt tctgcattta tatggctcgc atcctattac
    19081 ctgcgatcgt ctcaccgatt acccgaaaat gtttgacgat gacaaactgc caaaacgcta
    19141 ctttaatgta aattgctacg tgtcatctat caagaaaacc gatgaattgc tgaaacgggt
    19201 atatgatttg ctagtgaaaa accaagaaaa tcaccagcgt tcattctcaa tggtttattt
    19261 gtctgatcac ggtttatcgc acgaggtttc aaaagagaac attgttatcc acaatggaaa
    19321 ggatagaagt aaattacact acgatattcc gctgtttaaa atttcaagcg atgataccca
    19381 acgtaatgag tataaagcct ttaaatccgg cttaaacttc actaatggta ttgcgaattg
    19441 gattggtatc gaaaatccgt tattagataa agaaattaat ctttttaacg aacaaaacga
    19501 taaaagtgat tatgggctaa agaaaatcat tgaaacgcag tctactgtag aagatccagc
    19561 tgttcctatt cctgaaagct acttatataa agcgactaat tagcaaaagt aagtaacaaa
    19621 aaagcaggct ttaagcctgc ttttttagtt tttagtatca gaaaaattaa gcgttaccgc
    19681 cagtgatttt cgctacttct gctgcgaaat cttcttctac tttctcaata ccttcaccta
    19741 cttctaaacg aataaagtta gaaactgaag tatttactga ttttaaatat tgacctacag
    19801 attgagatgg atccattaca aacggctgac cggttaatga aacttcaccg gtgaatttag
    19861 ccatacggcc ttcaaccatt ttttctgcga tttcttttgg tttaccagaa ttcatcgcaa
    19921 tttcaatttg aatttcacgt tcttttgcta ctacatcagc agaaacatct tctgggttta
    19981 caaattcagg tttgcttgca gcaacgtgca ttgctacttt cttaagctca tcttcagagc
    20041 ctgcacctgc tactaataca ccaattttcg caccgtgtaa gtattgagca ataacttcgc
    20101 cttctaagta ttgaacacgg cgaatgttca tattctcacc gattttcgca actaatgccg
    20161 cacgtttttc ttcaaattgt gcttgtaatg cttcgatagt tgtaccttta tttgcaactg
    20221 caaaatcagc aacttcgttc gctaattcta agaaaccggc atcttttgca acgaagtcag
    20281 tttcacagtt catttcaact aatacgccaa aacctgaagc gacacgagca aggattacac
    20341 cttcagctgc aacacgacct gcttttttag ccgctttcgc ttgaccggat ttacgcatat
    20401 tatcgattgc taattcaata tcaccgttcg cttcaactaa tgctttttta cattccatca
    20461 tacctgcgcc ggtacgttca cgaagttctt taactaatga tgctgtgatt tcagccattt
    20521 taaattcccc ttatttgata tggtaaaaca ggctctcacc tgcctagaaa tttcattgtt
    20581 tagggcaggt taaaacctgc cccctcaact gaattattcc gcagaagctt cttctgctac
    20641 ttcaacagtt tcaacaccgc gaccttcttt gattgcagca actgctgaat ctaagtaaag
    20701 ttggatagca cgtgttgcat catcgttacc gggaatgatg tagttaacgc catctggagt
    20761 tgagttagta tcaacaatcg caaataccgg aatacctaag ttgtttgctt ctttaattgc
    20821 gatatgttcg tgatcagcac cgataacaaa aattgcatcc ggtaaaccgt tcatatcttt
    20881 gataccgcct aagcttaact ctaatttttc taactcacga gtacgcatta acgcttcttt
    20941 tttagtgatt ttgtcaaaag taccgtcttg agtttgagtt tctaaatctt ttaagcgttt
    21001 gattgattga cgaactgttt tccagttagt caacatacca cctaaccaac ggtggtttac
    21061 gtagaattgt tggctctcta ctgccgctgc tttaacagca tcacttgctg cacgttttgt
    21121 accaacaaat aatactttac cattgttact agcaatgcga gttaattccg ctaatgcttc
    21181 gttgaataaa ggtaaagttt tttctaagtt gattacgtga acaccattac gagcaccaaa
    21241 gatgaatggt ttcatttttg ggttccagta acgtgtttgg tgaccatagt gaacgcctgc
    21301 gttaagcata tcgcgcatag aaacttgtgc cataagaatt ttccttcaaa gttgtttgtt
    21361 ttgccactta tgaacggcaa aacggggttt agcctccaca tatcctagaa aatcaatctg
    21421 ttaaagacac cccaattcct agcttgtgat atgtgtgtgt tttagtgtta aaaaataaat
    21481 gtgtacgttt tgcctgaata gacaaaaacg gggcgtatta tgccaaaaaa caaacaattt
    21541 gccaattatt ttattgctct cttcgcatta ctaaatcaag ctcaaaaata aaaaccgttc
    21601 tcattattga ctaaaaaaat ggggaggttt agaatgtctt tcattctgtt atgaaaacct
    21661 gtctgaagga gactatcatg aaaaaaacac tttctgcact tgctattgct gcagccactt
    21721 ttacatcaac ttcaacgctt gctgcaaatg aagtgaatgt ttattcttac cgccagcctt
    21781 acttaattga gccaatgcta aaaaactttg aaaaagatac tggcattaaa gtaaacatca
    21841 tcttcgctga taaagggttg gttgatcgtg taaaacaaga aggtgaatta agtcctgctg
    21901 atgtgctttt aacagtagat atttcacgcg taatggaaat tgttaacgct gatcttgcac
    21961 aaaaaattga ctctaaagtg ttagaaaaaa atattcctgc acaattccgt gactctaacg
    22021 accaatggtt tggtttaacc acacgtgctc gtgttatcta cacgtcaaaa gatcgtgtag
    22081 gtaaattacc agcaggcttt gactacctag atttagctaa accagagtat aaaggtaaag
    22141 tctgcgtgcg ttcaggcaaa aactcttaca atgtctcact attcgcggcg atgatcgaac
    22201 attacggcat tgaaaaaacc aaagcattct tagaaggctt aaaagcgaac ttagcacgaa
    22261 aaccacaagg tggtgaccgt gatcaagtaa aagcaattaa agaaggcatc tgtgattact
    22321 ctatcggtaa cagctactac tacggcaaaa tgttagatga tgagaaacaa aaatcgtggg
    22381 ctgaagcagc gattattaat ttcccgagtg gtgaacacgg cacgcacaaa aacatcagcg
    22441 gcgtagttat tgcaaaacac tcaccaaata aagcaaacgc ggtgaaatta attgaatacc
    22501 taagtggcga aaaagcacaa ggtttatatg ctgaacttaa ccacgaatat ccagtaaaag
    22561 aaggcatcga gccatcagca atcgtaaaag gttggggtac gttcaaatca gataccatca
    22621 aacttgaaga tatcgcaaaa aattacgaag ccgcattaaa attagttgat gaagtgaaat
    22681 ttgacgattt ctctgagaaa aaataatcaa ccgataagcg gtcatttttc cacaaaaatt
    22741 tgcaaaattt tgttaaaata caaccgcttg caaaaggacg cattttgcgt ccttttattt
    22801 ttttatgaaa taacaggctt aaagaaaaat gcgatcacaa ttttgctgga aaagtattgc
    22861 tgccctaaca acttttatcg ttttgcttcc tcttattgca atttgctatc acgcattgca
    22921 aggggataat gaaaaccttg ctcacctttg gcaaacaatg ttgccaatct atcttaaaaa
    22981 ctcaacttta ttagtattag gaaccgtttt ccttgcactg atttttgctc tgcctaccgc
    23041 ttggattgtg gcaaattacc gtttttgggg gcaaagaacc ttacaatggt tactttgttt
    23101 gcctctcgct atgcctgctt atttaattgc ctatttatat accgatttat tagattactc
    23161 aggtgctttt caaggctggc tgcgtagtat ttttggctgg actcatccgc aagattactg
    23221 gtttcctcaa attcgtacat tgtatggtgc ttgctttgtg cttgcgttag tactatatcc
    23281 atacattttt ttattagtgc gagttgcctt attagaacaa tctgaaaact taacacacag
    23341 tgcaaaaatg ctcggggctt cgccctctca gttgttccgt cgaattacgc tgccattaat
    23401 tcgaccttct gttgccgtag gcattgcatt agtggcaatg gaaacgcttg gcgatttcgg
    23461 tactgtggcc tattttgccg tgccaacact tactacggca atttatgatt cgtggctagg
    23521 ctatcacgat cttggtactg ccagccagat tgcgatcttt atgttgctaa tgattttcct
    23581 gtttttaagt ttagagcaat atagtcgccg taaacaaaaa agctatcaac gtggctatga
    23641 aaagaaatca gcctttaaat ttttaactgg ttggaaatta gcattagccc ttgcttggtg
    23701 ctggggttta ttggcgttag cctttttcat tccgtttggc aggttgctct attgggcata
    23761 cgactatttc gagcaagcgt ggaatttaga ctttgtccaa ttttcgctta atagtttgaa
    23821 agtatcgatc atcgcctccg tgataacggt actgattgct ctacttctgc atttttctaa
    23881 acgtttgaat acccgcaaaa ttttagtcaa aaatgaccgc ttgtcattac aacttgcctc
    23941 actgggctat gcggttcctg gcacagtatt agcgatcggt ttactttcgc ctttaacatt
    24001 tgccgatcat caactccatg cttggctaaa aagccttgaa ttatcacccg ttggattgat
    24061 tttttcaggc tcactctttg cattagtatt agcttatacc atccgatttt tagcaatggc
    24121 aattggcagc cttgaaactt cgctaaataa aatctctcca tcgctggata tggcgagcca
    24181 aacgcttggt aaaaatggct cagcaatgtt agtaaaaatt catatccctt taatttataa
    24241 aggtatttta actgcaggat taatggtctt tattgagagt atgaaagagc taaatgcttc
    24301 tctgctactt cgcccattta attttgatac actcgcaacc tatgtgttta cctttacatc
    24361 agacgagcag cttgagcgtg ctgctctgcc tgccatcgta ttggtgttag tcggtttact
    24421 gcctgttatt tggcttacca gatcccttat ttcgcaatct gaaaaagaaa gataaaggaa
    24481 ttttatgtct gttttaacta ttaatcatct caacctcaat ttcggcagta caaaggtttt
    24541 acaaaatctc catcttgctg tgaatcaaaa tgaaattatc tgtttgctag gtgcaagtgg
    24601 ctgtgggaaa actacactgc tcaaagccat tgcaggttta ttgccaattg agcagggaga
    24661 tattcattta gcgggtgaat gcctaaaaag taaagccgtg gaagagcgac aaatcgggct
    24721 gattttccaa gattacgctc tttttccaca cttgacggta gccgataata ttcaatttgg
    24781 cttatccaaa ttgccaaaag tacaacaaaa agcaattacc gaaaaaatgc tttcagttgt
    24841 gcatttacaa ggctttgaaa gccgttttcc acacgaactt tcgggcgggc aacaacagcg
    24901 tgtcgctatt gcccgagcat tagcctgcca gccagaattg ctactgttag atgagccgtt
    24961 ttccaatatt gacagccaaa ctcgctatgc aatgattcaa gagatcaagc aaatcttaaa
    25021 aagccaaaat gtgcccgcta tttttgtaac ccatagcaaa gaagaagcct ttgcatttgc
    25081 cgataaaatt gccgtgatgg atcaagggaa aattattcaa tttggtaagc caaacgagct
    25141 ataccattct ccagttaatc catttgtggc agatttttta ggtggcacaa actatcttaa
    25201 ctgtaatgta acggaagaca acgtgttatg cagccctatt ggcgagttcc gactcttccc
    25261 tgaaatgaac gttcagaaag ggcgttaccg ttggcttctt cgcccagaac agattatctt
    25321 aaaacccaat gagctaggtt taggtaaagt ggtaggcaaa ctgtttttag gcctatacta
    25381 ccgctatcag gttgaaatta aaggcattga gatagtaact taccaatctc aagagctgaa
    25441 aattggcgaa caagtggaag tgggcttcca agtaagagag tttatcctat tttaaggaga
    25501 atatatgaaa attgaagttt ggtcagatta tgcctgcccg ttttgttaca tcggcaaacg
    25561 ccacttagag caagccctag cccaatttga aggcgaggtt gaagtggttt tccgagcctt
    25621 tgagcttgat ccgcacgcta acggcgaacc ggagggcgat attcagcaac gcctaatgcg
    25681 gaaatatcaa aaaaccgcag aacaagctga tgaaatgatt cgttatgtgg aacaagccgg
    25741 caaacaagct gggctagatt tgcgttaccg caccacccaa tacactcgca cctttgaagc
    25801 tcatcgcttg gcgaaatttg cagaaagtaa agacttaggc gaagcaatgg ttgaacgttt
    25861 attcaaagcc tattttaccg ataacactat tctagctaaa cgcacagagc ttatcagttt
    25921 agccttagac attggcttag agcgtgatga aatcgctcaa ctgctcacag gtgatgattt
    25981 cgggcacgaa gtccgtgaag atgagcgagt cgctcacaaa tatggcattc acagcgtacc
    26041 gttttttgtg atcaatgaaa aactcggggt atccggggct caaccgccag aaatattact
    26101 tgacgctatc aaacaggcat tgcaaaaata atccgaaaaa agaccgcttg ttaagctaaa
    26161 caagcagtct tattcttctt ataatttaca atttattttt tggtgatcgc acctaaaata
    26221 ccacgcataa tttgtttggt gacttggttg cgtaaatttc tgccaactga atgcgccact
    26281 tggctaacca cttgttcggt aatcgattga tcttttttct tcttcgagcc aaaaatggaa
    26341 gagagaatac cgccaaagaa gtcattgttt gcttcttctg ccgcagcctg ctctgcttta
    26401 attgcttctg ctttcgcatt aagtaattca aacgcagatt cattatcgac atattggctg
    26461 tagtgatgat agagatcatc ttgcttcact aaactatcac gttcgcctgt ggctaatgga
    26521 gctaattggc tttttggtgg atagatatag gcaatttcta caggcgttgg catacctttt
    26581 tcatctagca ccgaaaccaa cgcttgcccc acaccaagtt gcgtgatggc ttctaccaca
    26641 tttacctctt tattcgctcg gaaagtttcc gctgctgatt ttaccgcttt ttgatcacgt
    26701 ggcgtgaaag cacgcaaagc gtgttggata cgattgccaa gctgccctaa tactgaatca
    26761 ggtatgtcca acggattttg cgtaacaaaa taaacaccca ccccttttga gcgaattaaa
    26821 cgaaccacct gttcaatttt atccaccaat gccttagggg catcgtcaaa caataaatga
    26881 gcttcatcaa agaataaaac aaacgtcggt ttttctgggt cgccaacttc tggcaaattc
    26941 tcaaagagct ctgccataaa ccaaagcagg aatgcactgt acactcttgg tgagttaatt
    27001 aatttttctg cattcaacat attgattaca ccacgcccat tacgggtttg gatccaatcg
    27061 tgcaaatcta atgcaggctc accaaataaa ttatctgccc cttcattttc aagccttaat
    27121 aacgcacgct gaatagctcc aacgcttgct gcagaaatat gcccatattc cagttggaat
    27181 tctttcgcat tatctgcgac aaatttaagc aacgcacgca aatcttttaa atcaattagc
    27241 aataaacctc tgtcatctgc cacacgaaaa acgagattta acaagcctcc ttgggtatcg
    27301 tttaaattga gtaaacgaga aagtaacatc ggtcccattt cggaaatagt gattcgaagt
    27361 gggatacctg atgtaccaaa tacgtcccaa aacgaaactg gatagccctt taagtaatct
    27421 tctcccccta aattaaactg taaaatgcgt tctgcaattt ttcctgaaaa attacccgct
    27481 tgtaccgagc ccgaaagatc accttttaca tctactaaaa atactggcac gccatcatca
    27541 ctcaaagatt ctgccaattt gcgtaaagta accgttttac ctgtacccgt agccccagca
    27601 attaaaccgt gccgatttgc cattttggca ttaagcgaaa taactttgcc tgtttctgtt
    27661 cgagcaattt gatacaaact catctttcat tctcttaaag gtaaattaat tttttgttct
    27721 catcatataa aaatttatca cttaattacg gctattcttt ttcgtttttg ccaagaacgt
    27781 ttttttactt cttgagcggt tcactttcgg taaagtcagt aaggattcct tgtcgtattg
    27841 actcacagga atctgatgcc caatatactc ttcaattgca ggcaaattaa ccgcataacg
    27901 ctcgcaagca aaactaattg aatggccgct ctcccctgct cgccccgttc taccaatacg
    27961 atgaacgtaa tcttctttat catcaggcag atcataattg aaaacgtgcg tgacatctgg
    28021 aatatgcaat ccacgagccg caacatctgt taccactaaa atatccaaat tgcctttggt
    28081 gaaattatcc agcaaagaaa ggcgtttttt ctgcggaata tcgccggtta gcattccaac
    28141 ccgatgtccg tctgccgata aatactgcca gatctcttcg catttatgct tggtgttggc
    28201 aaaaatcata caacgctccg gccactcttc ctcaagcaat gtcagcaaca atgccatttt
    28261 gtcttcattc gaggggtaaa atagctcttc tttaatacga tgtccggttt tttgtagtgg
    28321 ctcaatttca atatattccg cattatccat atcttcatag gcaagttccc gcacttttgc
    28381 cgaaagcgtt gccgaaaaga gcaaagttaa acgttctgaa ggcttaggtg cttttcgcat
    28441 taaataacgg atatctttaa taaaaccaag atcaaacatt cgatctgctt catctagcac
    28501 aatcacttga attttgtcta aattgataat gccttgtttt acatagtcaa tcactcgacc
    28561 tgttgtaccg acaagaatat ctaccccttt ttcaatttct tgaacttgtt tgtcgtaacc
    28621 atcaccaccg tatgccaaag ctagttttaa atcagaatgt tttaaaaaca gctcggcatc
    28681 tgccccaatt tgaaccgcca attcacgggt tggagcaaga attaatgctc tcggctgatt
    28741 ttttgacgtt tcgatttcgt tattcaataa atggttaaaa gttgcaatca aaaaggcaag
    28801 cgttttccct gtacctgttt gagcttgccc tgcaatatct ttgcctttca gcgtaatcgg
    28861 aaaggttttt gcctgaatcg gcgtacaaaa ttcaaagcct ttgctatcaa gggcatttag
    28921 tacattagcg tgaatcggga agtcaataaa gcggtgttcg gtaagatgat tagacatagt
    28981 atttccttga taattgtgat gtgacaagcg gtctttttta cacatttttt tgcaaaatag
    29041 catattgggc gttttttctc aaatttaacc gcttttgagt ttattcggca aaatagattg
    29101 gaaaagctct cggcttttca gcggttgtga ccctaaatag ggctttagtg ccattcgggt
    29161 aaaacgtttc gctgcttgtt gagtactttt ttctgaaaaa tccaactgag caaacgctaa
    29221 taaatcactg cctaaaaagc tctggttatt ctgtaataat gaggcgataa agccctgatt
    29281 ttcctgaaat tgataggtca ttttcggatc aactggcaaa ccggttgccg cacagtgcgt
    29341 aaaatccacc ccataaccca atgcttttaa cgtatgaaat tcaaaggtgc gtaaaatcgg
    29401 ctcaatctgt ttttgtgtgg caagctcggt aatgcaacgt aaataatgct gaaataattc
    29461 agggtaagcg gtctgatttt ccaatactct tgcaagtacc tcgttgatat aaaacccact
    29521 ataaagtgaa agcgtttcca tcggcaacgt taatgcagcc ggttctgctt tggttaaagt
    29581 tttcagatcc cctttacccg accaacgcaa caacaacggc gtgaacggct gtaaaaccgc
    29641 tttcaacggc gagcgagccc gccttgcacc tttagcaagt aaagtaatcc gcccgtgatg
    29701 ttcggtaaaa aactccacta ataaactgtt ttcgctgtat tcacgccgat gaaggacaaa
    29761 ggctcgttgc cattggtcta ttgtcataat ttcttgttaa ttatgaggtt gtaatttact
    29821 tctgccaaat ctccccctcc cctctttgct aaagagggga gatcttgcag agtatatttt
    29881 aaagtcattt tcactattta accttttata tagataggaa gatgaattta aaatttctgg
    29941 agaactagtc cccctcttta gaaaagaggg gttaggggag atttgattac gatattaatg
    30001 ctataacggg agccaactac tcgtccatat accctaaact tctcaatgct ctttcatcat
    30061 ccgcccaacc agcttttact ttcacccaaa gctcaaggtg cacttggttg tcaaataggc
    30121 gttccatatc ttttcgagct tcaatgccga tggttttgat tttttgcccc cccgcaccaa
    30181 taaccatttt tttctgacca tctcgttcta ctaaaatcaa gccattgatt tcatacaccc
    30241 cacgctcatt cattttaaat tgttcgattt ctaccgttac cgaataaggt aactcttcac
    30301 ctgtaaaacg cattagtttt tcacgaataa tttctgatgc cataaagcgt tgagagcggt
    30361 ctgtcacata ctcttcagga aagtggtgct caccttgacg cagtgattga cggacaaatt
    30421 tctgtaaaat atgcacattt ttaccccgtt gtgccgaaat tggcagaatt tcagcaaaat
    30481 caaatttttg tgaaagctcg gtaatatgcg gcagaagttc ttctttttcc ttgatgttat
    30541 caattttatt gattgccaat aaaacagggg cttttgccga acgcaatttg tttaacacca
    30601 tttcatcatc ttctgtccat tttgtgcctt ccacaacaaa gatgatgaga tctacatcgc
    30661 caatagcaga acttgctgca cggttcatta aacgattaat cgcacgtttt tcttctatgt
    30721 gtaagcctgg ggtatctaca taaatcgctt ggtattgatc ttcagtgtga ataccaacaa
    30781 tacgatggcg agtcgtttga gctttgcgtg aggtaatgga aattttttgt cctaaaatct
    30841 tatttaataa tgttgatttc cctacatttg ggcgaccaac aatcgcaata aaaccacaat
    30901 aggtttttgc aggagtttga atttgttctg tcattttgtt ttcctttcat tctgtggaat
    30961 gaatttgatg gtgcaagcgt ccacgcttgt accatttaat taaatcttta gcacaagcga
    31021 ggacgcttgc gctatcttac tttttcgttt taaccaccgc taacgctttt tctgcggcat
    31081 tttgttcggc ttttcggcgg ctggtgccaa tgccgataaa cacttcctcg acgttaatca
    31141 ctttacaggt tacacggaaa gtttggttat gagcttcgcc tttaatatct aatacatcat
    31201 attcaggcaa tggcaatttt ctaccttgta aaaactcttg caggcgggtt tttggatctt
    31261 tttgtgaatc gcctggactg atatctttaa gcaaatctga ataccaatct tccacctttt
    31321 ccattgcttt tgccatatct tgatcgagat aaatggccgc aataatcgct tcaacacagt
    31381 ccgataaaat cgattctcgg cgaaaaccac cactttttag ctctcctgga cctaatttta
    31441 ggtagtcgcc taaatcaaat ttgcgagcaa taatcgctag agtttgctca cgcacaagag
    31501 ttgctctcat acggctaagc tcaccttcat tcgcttttgg aaatttgtcg tataatactt
    31561 taccaatagt aaaatttaaa attgaatcgc ctagaaattc aagacgctca ttgtttttgg
    31621 ttgccgcact gcggtgtgtt aaggcctgaa tgaggtaatc aaggttatga aattgataac
    31681 ctaatttttt ctgtaatcgt tctagttgca tagtttatgt gaataaaggg gcgtatctca
    31741 tacgcccctg ttaagattaa ttgattgagg taaacattct agaaaaacga agccccgttg
    31801 ggaattcatt tgctttttta tctaaactta accaaataaa agtggcttta ccaacgatgt
    31861 ttctctcagg cacaaagccc cagaaacgac tgtcttcact gttatcacgg ttatcaccca
    31921 tcacaaaata gtatccttgt ggcacaaccc attcaccttc tgcttgccct tcttgttggt
    31981 agaaataagg tgcatagtta aatgccattg ggtgatttaa aatttgatga gttacattac
    32041 ctttttcagt gcgttctacc tgcatttcac cgtgatagaa aaactcagga tttggcttgc
    32101 cttcgctgta ttcaaatacc tttgtttcgc cattggcttt agtaaccgtt aattgctgag
    32161 ttgcaaaatc atatttaatt ttatcaccac ctactgccac cacacgctta atataatcaa
    32221 cgtgtggttg tgccggtgct ttgaatacaa tcacatcgcc tcgttctggt ttgcccgttt
    32281 caatcaaggt gttttgccag ataggatctt taatgccgta gctgaattta tttacgacta
    32341 aaaaatcgcc tacacgcaag gttggctcca ttgaaccact tggaatttga aacggttcaa
    32401 ataagaacga gcgaagtact gtaacaaaga ataaaatgcc gaaaagtgag gcaaaaaatt
    32461 cgcctactgc ggatttaggt tgaatttccg ctatttcttc agcggttaat tctctgccta
    32521 aacgtttttg ttgtagaaca atcgcctgtt tacgtcttgg gtcagcactg aatttgtaaa
    32581 acgcccaaaa tccaccacaa ataataacca aggcaactaa aataatggaa atagtatttg
    32641 gcagttgcat tgaatcaagc cattgccaaa taccataaat aatacctaga aaaataattg
    32701 gcataaattg tgccactgaa tgctcctttt tattcaaaat tgcaaagttt tctcaaaata
    32761 tgaccgcttg caagcggtcg tattttacac gaatattgac aattaatcct tacccacatg
    32821 aagaattgcc aaaaatgctt cttgtggcac ttctacgtta ccgagagatt tcattcgttt
    32881 tttaccctct ttttgttttt gtagcagttt cttcttacga cttacatcac caccgtaaca
    32941 ttttgctaat acgtttttac gcaactgttt taccgttgag cgagcaatga cgtggttacc
    33001 aattgccgct tgaatagcga tgtcaaattg ttggcgtgga ataagttcac gcattttttc
    33061 cactaattca cgtccacgat acgccgcatt tgcacggtga acgataatcg ccaacgcatc
    33121 aacacgctcg ccgttaatca taatatccac acgcaccata tcagccgttt ggaaacgttt
    33181 aaaaccgtaa tcgagtgaag cataaccacg agaggttgat tttaagcggt cgaagaagtc
    33241 taacactact tcgcccattg ggatttcgta agttaaggcg atttggttac cgtgatagac
    33301 catattggtc tgtacgccac gtttttccac acaaagggta atcacgttgc ctaggaattc
    33361 ttgtggcaca agcatattac attctgcaat cggctcacga atttctgcaa tattgttgat
    33421 tgctgggagt ttcgatgggc tatccacata gatcgtttcg ccactggttt gcaccacttc
    33481 gtaaactacg gtcggagcgg tagtaatcaa atcaagatcg tattcacgct ctaaacgctc
    33541 ttgaatgatc tccatatgca acaagcctaa gaagccacac cggaagccaa agcccaacgc
    33601 acttgaagtt tctggctcat agaacaatga cgcatcattt aggcttaatt tgcctaaagc
    33661 atcacggaag gcttcgtagt cgtctgaact aatcggaaat aaccctgcat aaacctgtgg
    33721 ttttactttc ttaaagcccg gtaatacttc agttgctggg ttgtggtggt gggttaatgt
    33781 atcgcccact ggtgccccta aaatatcttt aatcgcacaa actacccaac ctacttcacc
    33841 tgtttttagc tcggtagtat ccacttgttt tggcgtgaaa ataccaaggc gatctacatt
    33901 gtaagactgc cctgtactca tcactttaat tttatcgcct tttttcagca cgccattttt
    33961 cacacgcact aaagacacaa cgcctaaata gttatcgaac caagagtcga taattaacgc
    34021 ttgtaatggt gcttccgcat cgccttctgg tgcaggcatt ttcttcacga tttcttctaa
    34081 aacatcttca atgcctaaac ctgttttagc tgaacagcgt actgcatcaa tggcatcaat
    34141 gccgacaata tcttcaatct cttctgccac acgctcaggc tcggctgctg gtaaatcgat
    34201 tttatttaaa attggcacaa cctctaaatc tatctcaatt gcggtataac aattcgccaa
    34261 cgtctgtgct tccaccccct gccctgcatc aaccactaat aaagcacctt cacaagcagc
    34321 aagcgagcga gaaacttcat atgagaaatc cacgtgccct ggcgtatcaa taaagttgag
    34381 ctgataaatt tcgccatctt tcgctttata gtttaaggtt acactttgtg ctttaatagt
    34441 aattccacgc tcacgctcaa gatccattga atctaatact tgagcctcca tttcacgatc
    34501 tgataagcca ccacaagttt gaattaagcg gtctgataaa gtcgatttgc cgtgatcgat
    34561 atgagcgata atcgaaaagt tacgaatatt ttgcattttc atcgggcagt taatgtcctg
    34621 ttttgttatt tgtttatcaa aaattaatcg gggaattgta cttgaaatac aaggttttgc
    34681 aaagaaaaca aatagcaata agcggttatt ttttcctaaa aatgtgcaaa tttcttgaga
    34741 aaaatgaccg cttgcactca ccctaattgc aaataatttc tctaaaatat aaaa
//
LOCUS       DANLXO010000014        34690 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.014, whole genome shotgun sequence.
ACCESSION   DANLXO010000014 DANLXO010000000
VERSION     DANLXO010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34690
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.014"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            113..1135
                     /locus_tag="PXD69_000567"
     CDS             113..1135
                     /locus_tag="PXD69_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6282796.1"
                     /translation="MANGTSRNRRSSGRVTLADVAKVVGVGQMTVSRALRTPEMVSEP
                     LRKRIEEAIIELGYIPHFSARQLASAESHNLVIVTTSISSTENTLILSALRKSVADSA
                     LQMVILIADQESWFQELINHAPQAIVFLNLDCPPNVREWIKNSNIPTVEIGAIKKEPI
                     HLSVGIDSHEAMEKMIHFLVKKGYREIGLLSAKQDLSIFKQYLESWHTTLFAHHISPL
                     KIHHVVEDISFSAGATLLTEALLNWEAIDALVFLSDELACGALYEALRRHMSIPKDLA
                     IAGLGGLEVGSISYPKLTTIAIPYEQMGKIAGKQLLTLLSGKTLSAEEMIVKLPNKLV
                     IRDSAA"
     gene            1248..1661
                     /gene="secE"
                     /locus_tag="PXD69_000568"
     CDS             1248..1661
                     /gene="secE"
                     /locus_tag="PXD69_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDL6282797.1"
                     /translation="MATEIKTKTPEQVEQKGGKSKGANTALWLVAIVFLAVAAVGNAY
                     FSSHFSLIVRVLLLVVLLVGAVALAAITNQGQKAIHFIKESRTELRKIIWPTRPEATQ
                     TTLIVLAMCVVVSLVLWGIDSIIVALITFVTSLRF"
     gene            1663..2226
                     /gene="nusG"
                     /locus_tag="PXD69_000569"
     CDS             1663..2226
                     /gene="nusG"
                     /locus_tag="PXD69_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDL6282798.1"
                     /translation="MSEVEVKENGSKRWYVLQAFSGFENRVAVTLREYIKLHKMEEQF
                     GEVLVPTEEVVENVGGKRRKTERKFFPGYVLVEMEMNDDTWHLVKSVPRVMGFIGGTA
                     DRPAPITKREADRILNRVQETAEKPRHRKEFQPGESILVTEGPFADFSGTVEEVDYEK
                     GRLKVSVSIFGRATPVELEFSQVEKQS"
     gene            2459..2887
                     /gene="rplK"
                     /locus_tag="PXD69_000570"
     CDS             2459..2887
                     /gene="rplK"
                     /locus_tag="PXD69_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDL6282799.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     RTESLEKGLPIPVVITVYADKSFTFVTKTPPAAVLLKKAVGIKSGSGKPNKDKVGTVT
                     QEQIRQIAETKAADMTGATIETKMKSIAGTARSMGLIVEE"
     gene            2892..3581
                     /gene="rplA"
                     /locus_tag="PXD69_000571"
     CDS             2892..3581
                     /gene="rplA"
                     /locus_tag="PXD69_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDL6282800.1"
                     /translation="MAKLTKKMKAIKAGVDSTKAYDINEAVEVLKKFATAKFVESVDV
                     AVNLGIDSRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAE
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQ
                     IRYRNDKNGIIHTTIGKADFSAEQLKDNLNALLAALTKAKPTTAKGIFIKKVSISTTM
                     GAGVAVDQASL"
     gene            3643..4062
                     /locus_tag="PXD69_000572"
     CDS             3643..4062
                     /locus_tag="PXD69_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282801.1"
                     /translation="MLRLLSFCFIFLLSACTVLPQIKQLPPQVESVKSFKVENNGQQS
                     LLLIQFYENKWRWIQTDPLGAPIARVWLTKKGWEPDGFVMPNKQAQLLFTALVNALNP
                     HSPPFYLDKGWKIEREKSQFTIWLPDSSKWKVEILGE"
     gene            4149..5371
                     /locus_tag="PXD69_000573"
                     /pseudo
     CDS             4149..5371
                     /locus_tag="PXD69_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005544283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            5364..5768
                     /locus_tag="PXD69_000574"
     CDS             5364..5768
                     /locus_tag="PXD69_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydratase"
                     /protein_id="HDL6282802.1"
                     /translation="MHKFTFPIEQIAPLVPHSGNMILLDRITAFGEDFLTAETNIRPD
                     NPLIKHGKLATYASIEIMAQAGEPVRLGYLLGTRKLHLHRQEIPIGSQLQIQIKMSIQ
                     DATGFGVFDCQLIDLADNQVLLEGALNVFSPK"
     gene            5868..7301
                     /locus_tag="PXD69_000575"
     CDS             5868..7301
                     /locus_tag="PXD69_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL6282803.1"
                     /translation="MQEAYDIQHLCTRKEDKSFDRKSARKEPKEILRHLIGFANADGG
                     LLVIGIEDNGEITGFNYQKAHQPEEFIHALHNLQKMPIPVTYQQIEVVNSRGLADFVL
                     LFEVTASSGRVITSHDDRVFLRSKDQTLELNFEQRLQLEYEKGQRAFEEQPIARADFT
                     DLDMDLLEQYRQKLHTDRSIEEILKARDLINKEGQITNACILLFGNNPTRYFPNARLR
                     FLRYEGKAPLTGRTFNVVKEFMLEEPIPKLLESAKAVLKSQLREFQRLDENGQFTKID
                     EYPEFAWLEGIVNAIAHRSYSNQGDCIRISMFDDRLEIFSPGGLPRPVTLENMYYTRF
                     SRNPKIARVLYEFGWVKELNEGVNRMAEEMNAYQLNTPSYFEPNENAVRLILENNIEH
                     RTLRALERIEEIFTQDIMATLNKNEVTILQYLYENEMITVKIASEILDRSKELSRRIL
                     KSLEQKNILTWHGLSPKDPTQYYTLKK"
     gene            7315..8043
                     /gene="fabG"
                     /locus_tag="PXD69_000576"
     CDS             7315..8043
                     /gene="fabG"
                     /locus_tag="PXD69_000576"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL6282804.1"
                     /translation="MNNTVLITGSSRGIGKAIALTLAQQGFDIVVHCRSRVEEAEAVA
                     QAVRNLGKNARVLQFDVADREKVRSILEADVEQHGAYYGVVLNAGLTRDNAFPALTDE
                     DWDSVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGI
                     IGAAKALAIELAKRKITVNCVAPGLIDTDILDENVPIEEILKMIPAGRMGDPDEVAHA
                     VAFLMDEKATYITRQVIAVNGGLC"
     gene            8106..9251
                     /locus_tag="PXD69_000577"
     CDS             8106..9251
                     /locus_tag="PXD69_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HDL6282805.1"
                     /translation="MKRVVITGIGVVTAFGKEWAEIHGYQPPKHWNRKQLRSLGRVSQ
                     FVVEASERALAQAGLLDENGVIFDWLKDRRMGVACGSSTGSTNDIKDAAELLMTGKSD
                     GFNANTYVRMMPHTTAANIGIFFGLTGRIIPTSSACSSGSQGIGYAYEAIKYGMIPMM
                     LAGGGEEFCASKVYVFDSLYAASRRNDNPKGTPRPYDKDRDGLVIGEGAGMFVLEELE
                     HALARGANIIAEVVGYGANSDGSHVTRPQATTMQRCMELALKDAGIQPNQVGYVNGHG
                     TATEQGDIAETQATTAVFGKIPLSSQKSYLGHTLGACGALESWFSIEMMRDGWFAPTL
                     NLENVDERCGDLDYLQGDGREIHTDYVMNNNFAFGGVNTSLIFKRWK"
     gene            9265..10170
                     /locus_tag="PXD69_000578"
                     /pseudo
     CDS             9265..10170
                     /locus_tag="PXD69_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dialkylresorcinol condensing enzyme"
     gene            10193..11335
                     /locus_tag="PXD69_000579"
     CDS             10193..11335
                     /locus_tag="PXD69_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDL6282806.1"
                     /translation="MLSNVYITNTSAFLPNAPVSNDAMEAVLGMVGETPSRVRKMILR
                     SNGIQHRYYAIDPITRQATHSSTELAVQAVKKLGNSATSATCLAVGTSYPDQIMPGQG
                     VMVHGLLDAEPMEVLTTAGVCVAGMAAMKHAYNAVRIGEHRAAIATASETASAIMRSE
                     HFRAEIDHKKLDDARPEIGFEKDFLRWMLSDGAGAVLLANQPNEKGLSLKIHWIDLVS
                     YANEMPVCMYAGAEFIDGNYTGWKAMSEAQRAECSAMAVKQDVKLLNENIVKYTVEKA
                     LERIIPKYKLNAEEIDYFLPHYSSGSFRDKLLEGLQRINFLIPQEKWFTNLTTKGNTG
                     SASIYIMLDEFIRTHDLKQGQKILCYVPESGRFSSCFMLLEAVVNS"
     gene            11384..11599
                     /locus_tag="PXD69_000580"
     CDS             11384..11599
                     /locus_tag="PXD69_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL6282807.1"
                     /translation="MDINDIPQDNSKIFNGERKVIYARNPQPEIRQMISSILACYAWD
                     ENNPFVAKSDARLKALAEVVGKAEIGD"
     gene            11880..12371
                     /gene="rplJ"
                     /locus_tag="PXD69_000581"
     CDS             11880..12371
                     /gene="rplJ"
                     /locus_tag="PXD69_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDL6282808.1"
                     /translation="MALNLQDKQAIVAEVNEAAKGALSAVVADSRGVTVEKMTELRKA
                     AREAGVTMQVVRNTLLRRAVEGTEFECLTDTFTGPTLIAFSNEHPGAAARLFTEFAKT
                     NKEFELKGAAFEGKKQDVAFLATLPTYEEAIARLMGTMKEAAAGKLVRTLAALRDQME
                     AAA"
     gene            12430..12798
                     /gene="rplL"
                     /locus_tag="PXD69_000582"
     CDS             12430..12798
                     /gene="rplL"
                     /locus_tag="PXD69_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDL6282809.1"
                     /translation="MSLTNEQIIEAIASKSVSEIVELITAMEEKFGVSAAAAVAAAPA
                     AGAAAAEEKTEFDVVLAEAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISK
                     AEAEALKKELEEAGAKVEIK"
     gene            complement(12905..13735)
                     /locus_tag="PXD69_000583"
     CDS             complement(12905..13735)
                     /locus_tag="PXD69_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL6282810.1"
                     /translation="MVQKPLNHYLEMQEHFLYVPYLHHHRRIRVLLPKDYHNEGWERY
                     PVLYMHDGQNVFYSKESYSGHSWKIIPTIKSHQELPKMIIVGIDNAGANRLNEYGPWK
                     TTTGSTPETRNAGGLGEEYAKWVVETVKPFIDIHYRTKPQQEHTLLAGSSMGGIITAY
                     MGSRYPHIFGHLGVFSLASWFSEPDFLRFTHQYPLQPNTKVFIQVGTNEGDEIDSHFI
                     SNTNQTYIDCSLNYYQALIRIGVPLDNIRLRIMANEIHHEMHWADHFVEFLHFSLLRK
                     "
     gene            13961..15502
                     /locus_tag="PXD69_000584"
     CDS             13961..15502
                     /locus_tag="PXD69_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HDL6282811.1"
                     /translation="MQASLQDILEVVKAKNLTYQQKLMSLGNIAERLFNPIELLGYTE
                     EEWEHIENQMICDLNEGYAIYRPRYILPDYNVYMQKGCQFLDLPPPTNLDEALDGLLI
                     LYSHVPSITTFPVYIGRLDQLLEPFITDEEQDYIKIKRFLNHIDKTISDSFCHANIGP
                     NDTKAGRLILKAVIELENITPNMTIRYDKTKTSREFAELAAKACLLVSKPSFANDAYY
                     IQDLGEEYGIASCYNALPECGGAYTLTRLRLGTIGRACASVEQMVNEMLPKVAKLALS
                     TMDKRHKFLVEESNFFESSFLVQEGFIKRTNFTSMIAIVGLADAVNHLLKQEGLNETF
                     GQSKRGDEIATLIMDKLQAVNDAHKGLYVERTNNQYLLHAQVGANNHAEDKMNTPAHR
                     IRVGEEPTLLAHLKQSAPFHKYFPSGTGDLFAFDQTYTDHLDAVVDIIDGSFAQGYRY
                     ITTYLKNTDLIRVTGYLVKKSEVERYRKGEAVLRDTTWYGSGTDDCAKVFDRQLRDEE
                     NVNAG"
     gene            15505..16293
                     /locus_tag="PXD69_000585"
     CDS             15505..16293
                     /locus_tag="PXD69_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDL6282812.1"
                     /translation="MAALSEIFVPLHRIIPFSNVEGQGNRTSIFLQGCKLNCLYCHNP
                     ETIPRYSKEAKQVSLQYLYDQVMEAVPFIRGVTISGGEPTIHHKKLVPLFEALREQGL
                     TCYLDSSGFFDFEATEPLINVTDKFLFDLKGDGAGLQTLCFDRKNQAGKVPEQALPNV
                     NHIKPENLARNLQNLAKLLPLDKVEEVRLVYLNEFYNAHHLLEKVADLLKPYPDVLLK
                     IIRVHTKGARDETGLARFVPTIEQTDELAAFAKRHGIQKVITIY"
     gene            16306..17563
                     /locus_tag="PXD69_000586"
                     /pseudo
     CDS             16306..17563
                     /locus_tag="PXD69_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005760733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
     gene            complement(17642..19651)
                     /locus_tag="PXD69_000587"
     CDS             complement(17642..19651)
                     /locus_tag="PXD69_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6282813.1"
                     /translation="MSAENMPSVIRFEQAVAKKDYESACTELLSILSKLDSNFGGISN
                     IELNMPEQIENLENDKAIYFCTRMAVAITRLFEDPALEISEHGAMRFLTLQRWIALIF
                     ASSPYVNADHILRTYNRNKESANPNTVDLDATLQALIKFCILYLPESNILLNLDAAWN
                     ASSDLTASLCFALQSPRFIGTSSAFAKRAAILQWFPEKLAQIENLNKLPSAISHDVYM
                     HCSYDIEANKHNVKRSLNAVIRRHLLSVGWEDRKIEQLGTRNNKPVMVVLLEHFHSSH
                     SIYRTHSTSMVAAREHFHLIGLGSDAVDEMGQQVFDEFHLLPQDGSLFDRLSFLKDIC
                     DKNNPAVFYMPSIGMDLTTIFASNTRLAPIQAVALGHPATTHSDFIEYVIVEDDYVGS
                     ESCFSEQLLRLPKDALPYVPSALAPQNVVYNLRENPEVIHIGIASTTMKLNPYFLEAL
                     KAIRDRAKVKTHFHFALGQSSGITHPYVERFIKSYLGNDATAHPHSPYDEYLNILHNC
                     DMMLNPFPFGNTNGIIDMVTLGLVGVCKTGPEVHEHIDEGLFKRLGLPNWLITQTAEE
                     YVTQAIRLAENHEERLAIRRDIIENNKLQTLFSGDPRPMGQIFLAKVQAWLADKNSKN
                     AEVEVKTKKVRKAATASQSAKKQTTSKTQTAKAEKDNTAKTETKS"
     gene            complement(19661..20998)
                     /gene="rimO"
                     /locus_tag="PXD69_000588"
     CDS             complement(19661..20998)
                     /gene="rimO"
                     /locus_tag="PXD69_000588"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDL6282814.1"
                     /translation="MSASPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYENADL
                     VIVNTCGFIDSAVQESLESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHS
                     YEAVMNHVHKYVPKPEFNPYTSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMR
                     GDLASRSIVQVLDEAKRLVDAGVKELLIVSQDTSAYSLDRKKEEATKTVFWNGMPIKS
                     NLITLCEQLGSMGVWVRLHYVYPYPHVDDLIPLMAAGKILPYLDIPLQHASPKILKAM
                     KRPGSIERTLERIKKWREICPELTLRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGC
                     FKFSPVEGAVATDMPDQVPEEVKEERFHRFMQLQQEISAARLQAKIGKTVQVIIDDID
                     EEGIIGRSMADAPEIDGVVYVDNPSNQLVTVGQIISVTITHADEYDLWGILNN"
     gene            complement(21153..21845)
                     /gene="mtnN"
                     /locus_tag="PXD69_000589"
     CDS             complement(21153..21845)
                     /gene="mtnN"
                     /locus_tag="PXD69_000589"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDL6282815.1"
                     /translation="MKIGIIGAMAQEIEILRQVMVEPKVTELAGCKIFEGKINNTRVA
                     LLQSGIGKVAAAIGTTLLIQLTQPDMIINTGSAGGLDPDLNVGDILISTEVRYHDVDV
                     TAFGYEIGQLPANPPTFSPNEQLVELAQKEAKKAGYNVVSGLICSGDAFINGNDKINQ
                     IRQNFPNVVAVEMEAAAIAQVCHGFNLPFVIVRAVSDVADKESHLSFEEFLPLAAEKS
                     STIVLAMLNNID"
     gene            complement(21903..22124)
                     /locus_tag="PXD69_000590"
     CDS             complement(21903..22124)
                     /locus_tag="PXD69_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HDL6282816.1"
                     /translation="MDNNYTLSAKITELETKVAFQELIIEELNQALIEQQFAIDKLQT
                     QIRHIAEKLKGAQLSQVASQAEETPPPHY"
     gene            22212..22937
                     /gene="fkpA"
                     /locus_tag="PXD69_000591"
     CDS             22212..22937
                     /gene="fkpA"
                     /locus_tag="PXD69_000591"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6282817.1"
                     /translation="MLKTKLSLFTLIVGTLFSTNVMAEEKADPKFVDDSSYAVGVLMG
                     KNINGVIESQKDIFTYNQDKILAGVQDTLKKTGKLTDEDLQKQLKSLDAYLSAKEAKI
                     NEEKTKATVAAGDKFRADYKKQSGVKETASGLLYKIEKAGEGNSPKAEDTVKVHYKGT
                     LTDGTVFDSSYDRGEPIEFQLNQLIPGWIEAIPMLKKGGKMEIVVPPALAYGDRAAGK
                     IPANSTLKFEIELLDFKAADAKK"
     gene            23034..23690
                     /locus_tag="PXD69_000592"
     CDS             23034..23690
                     /locus_tag="PXD69_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6282818.1"
                     /translation="MTKKFTPFSDEDHAILASYFPMVDGIAALIGEHCEIVLHSLEFL
                     EHSAIYIANGHNTNRKIGSPITDRALKSLHHMATDSVSKPYFTKAKGGVLMKSITIAI
                     RNGKQHVIGLLCININLEVPTSQFLNSFIAPVDTASEVTFASSVEDLVSQTIQTTIDD
                     VMADRQISNNNKNRQIVISLFEKGIFDIKDSINQVAEKLDISRHTVYLYIRQIKQDND
                     "
     gene            23690..24067
                     /gene="tusD"
                     /locus_tag="PXD69_000593"
     CDS             23690..24067
                     /gene="tusD"
                     /locus_tag="PXD69_000593"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HDL6282819.1"
                     /translation="MDYVLAIKSPVYGSQGAFLAYQVAEELLKANHTICQIFFFQEGV
                     SNANALVNPASDEVNLVEMWKKLAKLHRLPLHLCIAAAQRRGVVDEQISANATHNLAE
                     GFTLAGLGEFSQAVLKADRLLTF"
     gene            24069..24440
                     /gene="tusC"
                     /locus_tag="PXD69_000594"
     CDS             24069..24440
                     /gene="tusC"
                     /locus_tag="PXD69_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HDL6282820.1"
                     /translation="MKKYKLAFLFTQPPFGSAVSREGLDALLAASAFCDEQEIAILFI
                     NDGVFNLIADQQPEKLLQKDHISTFKLLELYDLTECFICQESVSLRGLDNADWLLRML
                     QFKTHAEMIALLNQAEKVMTF"
     gene            24450..24725
                     /gene="tusB"
                     /locus_tag="PXD69_000595"
     CDS             24450..24725
                     /gene="tusB"
                     /locus_tag="PXD69_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HDL6282821.1"
                     /translation="MLYTLSKANYDEETLNFFFSHLSENDAVVLWQDGVLQAVKSPQF
                     FAKLPRCYLLAQDVQARGLQEKLTAFQCISLSELVKLTAVYFPQVAL"
     gene            24841..25740
                     /locus_tag="PXD69_000596"
     CDS             24841..25740
                     /locus_tag="PXD69_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282822.1"
                     /translation="MVMAEENNTWVDKKHETVSTTLDRWANNINSWLGDADPDKPGTA
                     SLRVMLDSRWDKHDKFTYKPRVRGKIKLPILKKHLNVVFGDDELDNELTDKNHAGKLY
                     KNVNPNKRYNSREARDSNSSIGLRWSDGIKALGIETDLDAGIRSGSDIFGRLRISKDW
                     KITDQFSTRLEQIYRYGSESKHYLRTNFENKYTETDTTFIMNHTNFEYRHDVDEERSW
                     GNSLYRQHNFKPLTHISYGISMGGRLDKELSKFNYWGPFVSYRQPIWRNWLFIQPEIS
                     FYNDKDKDRKHFIQTFVRLEAIF"
     gene            26090..30115
                     /gene="rpoB"
                     /locus_tag="PXD69_000597"
     CDS             26090..30115
                     /gene="rpoB"
                     /locus_tag="PXD69_000597"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDL6282823.1"
                     /translation="MAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSFEKFIEKDPE
                     GQQGLEAAFRSVFPIVSNNGATELQYVSYELGEPVFDVRECQIRGTTYAAPLRVKLRL
                     VSYDREAAAGTVKDIKEQNVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTE
                     EILNLFFEKIKFEIADNKLLMTLVPERLRGETASFDIAANGKVYVEMGRRITARHIRA
                     LEKDNVTQIEVPVEYIVGKVAAQDYVDLSSGEVICPANMEISMEMLANLSQAGYNQIE
                     VLFTNDLDHGPYISETLRVDPTYDRLSALVEIYRMMRPGEPPTKEAAEALFDNMFFSA
                     ERYDLSAVGRMKFNRSLEIPEGVGSGILSNDDIIGVMKKLIEIRNGRGEVDDIDHLGN
                     RRIRSVGEMAENQFRIGLVRVERAVRERLSLGDLDGVTPQDLINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEG
                     PNIGLINSLSVYARTNNYGFLETPFRKVVNGQVTEEIEYLSAIEESNNIIAQANSNLD
                     ENFRFTDTYVTCRQQGESGLFKPEEVQYMDISTQQVVSVAAALIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAIVAKRGGTVQYVDASRIVVKVNEDE
                     TIPGEAGIDIYNLIKYTRSNQNTCINQVPCVNLGEPVARGEILADGPSTDLGELALGQ
                     NIRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGAEEITADIPN
                     VGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGTSGTVIDVQVFTRDGVEKDKRAKEIEEMQLCEAKKDLAEELEILEAGLF
                     TRVRNLLIEGGVKESALDGVAREKWLEQTLEDEAKQNQLEQLAEQHEELRKEFERKLE
                     IKRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYD
                     ENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAHGIGDQIDKMIKQQQEVAKLREYMQ
                     KAYDLGHGSQVVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLELGGLP
                     TSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKA
                     QFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGIPE
                     SFNVITKEIRALAIDMELDEA"
     gene            30378..34661
                     /gene="rpoC"
                     /locus_tag="PXD69_000598"
     CDS             30378..34661
                     /gene="rpoC"
                     /locus_tag="PXD69_000598"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDL6282824.1"
                     /translation="MKDLVKFLKAQTKSNEDFDVIKIGLASPDKIRSWSFGEVKKPET
                     INYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRER
                     MGHIELACPVAHIWFLKSLPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQL
                     LTEEQFMDAEERWGDEFEAKMGAEGIQALLRDLDLEHQCETLREELQETNSETKRKKI
                     TKRLKTLEAFLQSGNKPEWMVMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINR
                     NNRLKRLLDLVAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKG
                     KQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFRPFIYSKLENRGIA
                     STIKAAKKMVEREDPIVWDILAEVIREHPILLNRAPTLHRLGIQAFEPLLIEGKAIQL
                     HPLVCAAFNADFDGDQMAVHVPLTLEAQLEARALMMSTNNVLSPASGDPIIVPSQDVV
                     LGLYYMTREKVNGKGEGMYFLDPREAEKAYRTGQAELHSRVKVRVTEYEKNEAGELEA
                     KTSLVDTTIGRSILWMIAPKGMPFSLFNQTLGKKAISKLINESYRRLGLKESVVLADQ
                     IMYTGFAYAARSGASVGIDDMVIPEQKYAIIEAAEAEVAEIQEQFNGGLVTAGERYNK
                     VIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASFNSIFMMADSGARGSAAQIRQ
                     LAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLT
                     RRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRVLGRVVAEDVLKPGTDE
                     VLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTCDTDFGVCAKCYGRDLARGHLINQGE
                     AVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIKLTNAKFVTNKEG
                     KIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKHDGAEVAVGEVVANWDPHTMPVIS
                     EVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALRLVDSNGKD
                     ILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLPRVADLF
                     EARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFEGEMV
                     QRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQMLR
                     KAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQARAKKRAQLEA
                     GIAVVPEFEAPAAKANSFVTDADIEAEFEFVADDATQSLAALLNAGEEE"
BASE COUNT        10286 a         6903 c         7818 g         9683 t
ORIGIN      
        1 atttttagta tttaattaga taaaaaataa tcagttggca ttttgctctg ttctttctaa
       61 ataggaaaat taaggattta gccctataat atggaacaat taggaaaata gtatggcaaa
      121 tggaacaagt agaaatcgaa gatcttcggg cagagtcact ttagctgatg tagccaaagt
      181 tgttggtgtt gggcagatga cggtatctcg tgctttgcgt acaccagaaa tggtgtcgga
      241 gccactacgt aaacggattg aagaggcaat cattgaacta ggatatattc cgcatttttc
      301 tgctcggcaa ttagcttctg cagaatcaca taatttggtc attgtgacga cgtcgattag
      361 ctcaacggaa aataccttaa ttttatcggc attacgcaaa agcgtggcgg attccgcatt
      421 gcaaatggtg attttgatcg ctgatcaaga atcttggttt caagaactga ttaatcatgc
      481 tcctcaagcg atagtgtttt tgaatttaga ttgccctcct aatgtccgtg agtggattaa
      541 aaacagcaat atccctaccg tagaaatagg tgcgataaaa aaagaaccga ttcatctcag
      601 tgttggaatt gatagccacg aagcaatgga gaaaatgatc cattttttgg tgaaaaaagg
      661 ctatcgagag attggattgt tatcggcgaa gcaagattta tccatcttca aacaatattt
      721 agaaagttgg catacgactt tatttgcaca tcatatttct cctttaaaaa tccaccacgt
      781 agtagaggat atttcgtttt cggcaggagc aactttgttg actgaagccc ttctaaattg
      841 ggaagcaata gatgcattgg tttttttatc cgatgaattg gcttgcggag cattatatga
      901 agcattacgc cgacatatga gcattccaaa agatcttgcg attgccggtt taggtggttt
      961 agaagtgggg agtatttcct accctaaatt gacaaccatt gcgatccctt acgagcaaat
     1021 gggaaaaata gcaggtaaac aactacttac tcttttgagt ggtaaaacct tatcagcaga
     1081 agagatgatt gttaaattac cgaataagct agtgattcgt gatagcgccg cataatattg
     1141 attttgcata aaaatctata aaagatcgtg gcaagtcttg tagaaaatga tagaatttaa
     1201 cgctttaaaa taatttctga tttttttatt cattttttag gttatatatg gctactgaga
     1261 ttaaaacaaa aacccccgag caagtcgaac aaaaaggggg gaaaagcaaa ggtgcaaata
     1321 cagcattatg gctggttgcg attgtatttt tagcagttgc tgcggtaggt aatgcctatt
     1381 tttcatctca tttttcatta attgttcgag tgcttttatt ggtggtgttg ctagttggtg
     1441 ctgttgcact agcggcaatt acaaatcagg ggcaaaaggc aattcatttt attaaagagt
     1501 ctcgaaccga actacgcaaa attatctggc cgacacgccc tgaagcaaca caaaccacct
     1561 tgattgtatt ggcaatgtgc gtagtagttt ccttggtttt atggggtatt gactcaatca
     1621 tcgtcgcatt aattacattt gtaacaagtt taaggttcta aaatgagtga agtagaagtg
     1681 aaagaaaatg gctcaaaacg ctggtatgta ttacaagcgt tttcaggctt tgaaaaccgt
     1741 gtggcagtaa cattgcgtga atacattaag cttcacaaaa tggaagagca gtttggtgaa
     1801 gtattagtgc caaccgaaga agtcgttgaa aatgtgggcg gtaaacgccg taaaaccgag
     1861 cgtaaattct tcccaggtta tgtattggtt gaaatggaaa tgaatgacga tacttggcat
     1921 ttagtgaaaa gtgtgcctcg tgtaatgggc tttattggtg gtacggcaga tcgccccgca
     1981 ccaattacca aacgtgaagc agaccgcatt ctaaaccgtg tacaagaaac agcggaaaaa
     2041 ccacgccaca gaaaagaatt ccaaccgggc gaaagcattt tggttacaga aggtccgttt
     2101 gcagatttct ccggtacggt cgaagaagtg gattacgaaa aaggtcgctt aaaagtatcg
     2161 gtgtcgattt ttggtcgtgc gacaccggta gaattagaat tcagtcaagt ggaaaagcag
     2221 agctaatttc aattaatttc acacacaagc ggttattttt ctcaattttt tgcaaaattc
     2281 agcggaaaaa agaccgcttg taacaagatt tattcaacaa agcgaaagtt ttgcttgaaa
     2341 aatagtcgca aattctttaa aatttgcgac ctattacgag ccagcctgct gactcgtatt
     2401 ttttatgtaa caggggagct gattttcagc gttatcaccc atttagagga aaattaaaat
     2461 ggcaaaaaaa gtccaagcct acgttaaact gcaagttgca gcgggtatgg ctaacccatc
     2521 accaccggtt ggtcctgcat taggtcaaca aggtgttaac attatggaat tctgtaaagc
     2581 attcaacgct cgtactgaga gcttagagaa aggtttaccg attccggttg ttatcacagt
     2641 ttacgctgat aaatctttca cattcgttac caaaactcca ccggcggcag tgctactgaa
     2701 aaaagcggta ggtatcaaat ctggttctgg taaaccgaac aaagataaag tgggtacagt
     2761 aactcaagag caaatccgtc aaatcgctga aactaaagca gcagatatga ctggtgcgac
     2821 tatcgaaacc aaaatgaaat caatcgctgg tacagctcgc tcaatgggct taatcgtaga
     2881 ggaataatac aatggctaaa ttgactaaaa aaatgaaagc aattaaagct ggcgtagatt
     2941 ctactaaagc ttatgacatc aacgaagcag ttgaagtgtt aaaaaaattc gcaaccgcta
     3001 aattcgttga gagcgtggac gttgctgtaa acttaggtat cgattctcgt aaatcagacc
     3061 aaaacgtgcg tggtgcaacc gtattaccac acggtacagg ccgtaccgct cgtgttgctg
     3121 tgtttacaca aggtgcaaac gcagaagcag caaaagcagc gggtgctgac ttagtgggta
     3181 tggaagatct tgcagagcaa atcaagaaag gcgaaatgaa ctttgatgtt gttatcgctt
     3241 ctccagatgc aatgcgtgtt gtaggtcaat taggtcaagt attaggtcca cgcggcttaa
     3301 tgccaaaccc gaaagtaggt acagtaacac caaacgttgc agaagcggtt aaaaatgcga
     3361 aatctggtca gatccgctac cgtaacgaca aaaacggtat tatccacact actatcggta
     3421 aagcagactt ctcagctgaa caattaaaag ataacttaaa cgcattgtta gctgctttaa
     3481 caaaagcaaa accaacaaca gcaaaaggta tcttcatcaa gaaagtaagc atctctacta
     3541 caatgggtgc tggtgttgcg gttgatcaag catcacttta atttttaata gaatcaaaag
     3601 accgtagtgt taatactcta cggtcttttt ctttaggtac gaatgttaag attattatct
     3661 ttttgcttta tttttttgct tagtgcttgt actgtattac ctcaaattaa gcaattaccg
     3721 ccacaggttg aatctgtaaa atcctttaaa gttgaaaata atggccagca aagtttgctt
     3781 ctaattcaat tttatgaaaa taaatggcgt tggattcaaa ctgatccttt aggtgctcct
     3841 attgccagag tatggcttac taaaaaaggt tgggagccag atggctttgt aatgccaaat
     3901 aagcaggcac agctattatt tacagcttta gtcaatgcat taaaccctca ttctccacct
     3961 ttttatttag ataaaggttg gaaaattgag agggaaaaat cccaatttac gatttggcta
     4021 ccagatagca gtaaatggaa agtggaaata ttgggggaat aagcgaaaac ttgaacctct
     4081 atgcttgaat cacttgaata tgaattttat aattttagtg ccattacaca ataatactgg
     4141 aataaataat aatgacacta tatttatcag agcccgccat caccagtccg attggatatg
     4201 gcatcgtgga gcatttgaat gttttaatta atgcgaaagt atctccttta gatacgactt
     4261 cacagcctta tttacgacat aatatttcaa atagttcacc gaaatttcta gggcaagtct
     4321 ctgctagatt gcgtgatttt cctgttgaac tatctattga acaccgcagc cgcaataacc
     4381 aactgctatg gcacgccctt gcagaaattg agccgaaaat taccgcttgt atcgagcaat
     4441 tcgggcgtga gcggattgcg gtgatcatcg gcacgtccac taccggcgcc gatgaaaata
     4501 ttcccgtctt caaagccggt gtgcagggcg attatgccac cgagcagttt aatcaacagc
     4561 aaattctctt ctctgcgccg tctgatttcg ttgccgaagt gtatggctta acggggctga
     4621 gttacggcat ttccaccgcc tgcacctcag aggcaagagc gttaatttct gctgcccgtt
     4681 tactgaaagc cggcttgtgc gatgcggtga tttgcggtgg tgtggatacc ctttcgcctt
     4741 taactatcag cggatttagc tcgctggaag tgttatcaaa ccaacaaacc aacccatttt
     4801 ccgctaaccg taacggcatt aacatcggcg aaggcgcagc ggtgtttgtg atgagccgtg
     4861 aaccactgga cgaacatcgc attcagttac tgggttatgg ttccagctcg gacgcttacc
     4921 atatgtcctc acctcacccc gaaggggaag gggcaatttc cgctttccaa aatgccctgc
     4981 acaatgctga tttagacgca gccgacatcg gctggatcaa cctgcacggc acagggacgc
     5041 ttcataacga tcaaatggaa agcctcgctg tggcaaaaat cttcggtaat cagaccgctt
     5101 gcaccaccac caaaccctac accgggcata cccttgggct gccggtgcgg tggaagcggc
     5161 aattttgtgg ggaatgctct gtcgccaaca caacccgacc ggcaagctcc ctgcgcaatt
     5221 atgggataaa caagcggacg aaaacctgcc gaacattgcg atcaccgatg aacagagccg
     5281 ttgggcagca ggcagacgga ttggcgcaag cagctctttt gcctttggcg gcaataacag
     5341 cgtactgatt ttgggagaaa gcgatgcata aattcacctt ccctatcgaa caaattgcac
     5401 cattggttcc tcacagtggc aatatgatcc tactcgaccg cattaccgca ttcggcgagg
     5461 attttttgac cgctgaaacc aatattcgcc ctgacaatcc gctgatcaaa cacggaaaac
     5521 ttgccaccta cgccagcatt gaaattatgg cacaagccgg cgaaccagtt cgcttaggct
     5581 acctgctcgg cactcgcaaa ctgcacctcc accgccaaga aatcccgatt ggctcacagc
     5641 tacaaattca gatcaaaatg tctattcaag atgccaccgg cttcggcgta ttcgactgcc
     5701 aactgatcga tttagccgac aaccaagtgc ttttagaagg ggcgctgaat gtgtttagtc
     5761 cgaaatagag ttggtagtag taagtagtag taagtagtag taagtagtag taagtagtag
     5821 ttggtagtag ttggtagtag ttggtagtag ttggtaggaa attcgttatg caagaggcct
     5881 atgacattca acatctttgt actcgcaaag aagataaatc ctttgatcgc aaaagtgcga
     5941 gaaaagaacc gaaagagatt ttgcggcatt tgattggttt tgcgaatgca gacggcggtt
     6001 tattagttat tggtattgaa gataatggcg aaattaccgg ttttaactac caaaaagccc
     6061 atcagccgga agaatttatc cacgctctgc acaatttaca aaaaatgccg ataccggtga
     6121 cctatcagca aattgaggtg gtaaatagtc gaggtttagc ggattttgtc ttattatttg
     6181 aagttacagc ttcgagtggg agggtgatta cctctcacga tgatcgggtt tttctacgct
     6241 caaaagatca aactttggaa ctcaattttg aacaacgttt gcaattagag tacgaaaaag
     6301 ggcagcgtgc ttttgaagag caaccgatag cacgcgctga ttttactgat ctggatatgg
     6361 atttattaga acagtatcga cagaaattac acacagatcg ctcaatagaa gagattctga
     6421 aagcccgaga tttaattaac aaagaagggc aaattacgaa tgcctgtatt ttgctatttg
     6481 ggaataaccc gacacgttat tttcctaatg cccgtttgcg ttttttgcgg tatgaaggta
     6541 aagcacctct gaccggtaga acttttaatg tcgtcaaaga atttatgctt gaagagccta
     6601 ttcctaagtt attggagagt gctaaggcag tattaaaaag ccaattacga gagttccaac
     6661 gtttagatga aaacgggcaa ttcacaaaaa ttgatgagta tccagaattt gcttggttag
     6721 aaggtattgt caatgcgatt gcacaccgta gttacagtaa tcaaggggac tgcattcgca
     6781 tttcgatgtt tgatgaccgt ttggaaattt ttagtccggg tggattacct cgccctgtga
     6841 cgcttgaaaa tatgtactat acccgttttt cacgcaatcc gaagattgca cgagtgctgt
     6901 atgaatttgg ttgggtcaaa gagctgaatg aaggtgttaa tcgtatggcg gaggaaatga
     6961 acgcttacca acttaataca ccttcttact ttgaacccaa tgaaaatgcg gtcagactga
     7021 ttttagaaaa taatattgaa catcggacat taagggcatt agaacgaata gaagaaattt
     7081 ttacgcagga tattatggcg acattaaata aaaatgaagt tactatcctg caatatttat
     7141 atgaaaatga aatgattact gtaaagattg ctagtgagat attagatcgg agtaaagaat
     7201 tatctcgtag aatattaaaa agtttagaac aaaaaaatat tctcacttgg cacggcttaa
     7261 gtccaaaaga tccaacccaa tactacacac tcaagaaata gtaggaaata taagatgaat
     7321 aatacagttc tcatcaccgg ctcaagccgt ggtatcggta aagcgattgc tttaaccctt
     7381 gcacaacaag ggtttgatat tgtggtacat tgccgttctc gtgtggaaga agcggaagcg
     7441 gtggcacaag cggtcagaaa tctcggaaaa aatgccagag tgttacagtt tgatgtggcg
     7501 gatcgtgaaa aagtgcggtc gattttagag gcagatgtgg aacaacatgg tgcctattac
     7561 ggcgtggtgc taaatgcagg gcttacccgt gataacgcct ttcctgcttt aaccgatgag
     7621 gattgggata gcgtgttgcg taccaattta gacggttttt ataatgtcct gcacccgatt
     7681 atgatgccga tgatccgtcg ccgtaaagca ggcaggattg tctgtatcac ctcggtttcc
     7741 ggcttgatcg gcaaccgtgg gcaggtcaat tacagcgctt caaaagccgg cattattggt
     7801 gcggcaaaag cactcgccat cgagcttgcc aaacgtaaaa tcacggtaaa ctgcgtggcg
     7861 cccggcttga ttgataccga tattctggac gaaaacgtcc caatcgaaga aattctcaaa
     7921 atgatccccg caggacgaat gggcgatcct gatgaagtgg cacacgccgt tgcgttttta
     7981 atggatgaaa aagccactta catcacacgc caagtcatcg ctgtgaatgg tgggttgtgt
     8041 taactttagg ataataattc gtaggggcgg atccagtacc cgcccgaagc caaaaagaga
     8101 taaatatgaa acgagtcgtc atcaccggaa ttggtgtggt taccgctttt ggtaaagagt
     8161 gggcggaaat tcacggctat caaccgccga aacattggaa ccgcaagcag ttgcgcagcc
     8221 ttgggcgagt gtcgcaattt gtggtggagg ccagcgagcg ggctttagca caggccggtt
     8281 tgttggacga aaacggcgtg attttcgact ggctaaaaga caggcgaatg ggcgtggcgt
     8341 gtggctcgtc cacaggctct accaatgaca tcaaagatgc cgccgaattg ctgatgaccg
     8401 gcaaatcgga cggtttcaat gccaacacct atgtgcgaat gatgccccac accaccgctg
     8461 ccaatattgg cattttcttc gggctgacag ggcggattat cccgacttcc agcgcttgct
     8521 cctcgggcag ccaaggtatc ggttacgctt acgaagccat taaatacggt atgatcccga
     8581 tgatgcttgc cggcggtgga gaagaatttt gtgcctccaa agtctatgtc ttcgacagcc
     8641 tctatgctgc cagccgccgc aacgacaacc caaaaggcac gccacgcccc tatgacaaag
     8701 accgagacgg cttagtgatc ggcgagggag cgggaatgtt cgtattggaa gagctggaac
     8761 acgcgttagc acgaggggca aacattatcg ccgaagtggt gggctacggt gcaaacagtg
     8821 acggttccca cgtcacccgc ccacaagcca ccacaatgca acgctgtatg gaacttgccc
     8881 ttaaagatgc cggtattcaa ccgaaccaag tcggctatgt aaacggacac ggcacggcca
     8941 ccgagcaggg cgacattgcc gaaactcaag ccaccacagc ggtgttcggc aaaattccgc
     9001 tcagctcgca aaaaagctac ttagggcata cgctcggtgc gtgtggtgca ttggaaagct
     9061 ggttcagcat tgaaatgatg cgagacggct ggttcgcccc aacactgaat ttagaaaatg
     9121 tcgatgaacg ctgtggcgac ttggattacc ttcaaggtga cggacgggaa atccacaccg
     9181 attatgtgat gaacaacaat ttcgccttcg gcggtgtgaa tacctcattg atttttaaac
     9241 gttggaaata accgttttca aataatgaaa aagatattat tagtttatta ctcccaaacc
     9301 gggcaactca cccatttggc agaaaatttt gtacaatcgc ttgaacaagc gggcgttttt
     9361 gtggaaaaac tcgcaatcaa accgcaacag gaatacccgt ttccgtggcg gtttatgcgt
     9421 ttttttaaca ccttccccga aaccgtccac ctcacaccgc cgccgattga gcctctgccc
     9481 tttcagcacg aaatatacga tttggtgatc atcgcctatt ccgtgtggtt tctctccccc
     9541 agccagccga ttaccgcttt tttacagagt gaacaggcaa aaaagtgttg aaggatacgc
     9601 ccgtcatcac gctgatcggc tgtcgcaata tgtggctgat ggcgcaggaa aaagtgaaaa
     9661 aactgcttgc cgagagtgag gcgaagctca ttggcaacgt ggtcaaagtg gatcaatcta
     9721 acgactgggc gagttttatc accacaccgc tttggatgct gaccggcaag aaaaaaaatc
     9781 ggcaagctgc cgagcgctgg cattgccgaa agcgaaatgg aagatgtaaa acgcttcggg
     9841 gcaaaacttt tgcacatttt tagccaaaac caaccgcttg acagcaccct tttccgccaa
     9901 atgcaagcgg tcaaaattga cgaaaaattg atgatgagcg aaaaagtcgg tgcgagaagt
     9961 ttccaccttt ggggcaaatt actgatcaag tgcggtcaaa tttcaccgca cttacgccaa
    10021 gcggtactct atttttacat cctcttttta gtgacgttaa ttttaaccgt cgtcccgatt
    10081 tcaacggtga ttaaacggct attacgccca ctgctgaaag aaaaattaga aaaacaaaaa
    10141 cggtattttg ccgagccttc gggcgagtaa acgtacccta cacggaaact ttatgctatc
    10201 taacgtctat atcaccaaca cctccgcctt tttacccaac gcccctgtgt ccaacgatgc
    10261 aatggaagcg gtgttgggaa tggtggggga aacgccttcc cgagtgcgga agatgatttt
    10321 gcgttctaac ggtattcaac atcgttatta tgccattgac ccgataaccc gccaagcgac
    10381 tcacagcagt accgagttgg cggtgcaagc ggtcaaaaaa ttgggaaatt ctgcaacatc
    10441 agcgacttgc ttggcggtgg ggacatctta ccccgaccaa attatgccgg ggcagggggt
    10501 gatggtacac ggcttgcttg atgccgaacc gatggaagtg ctgaccactg ccggtgtgtg
    10561 cgtggcggga atggcagcga tgaagcacgc ctataatgcc gtacgcatcg gtgagcatcg
    10621 tgctgcgatt gcaacggctt ccgaaaccgc ctccgccatt atgcgcagtg aacatttccg
    10681 tgccgaaatc gatcataaaa aactggacga tgctcgccct gagatcggtt ttgagaaaga
    10741 tttcctgcgt tggatgctct cagacggtgc aggggcggta ttgcttgcca atcagccgaa
    10801 cgaaaaaggg ttgagcctca aaattcactg gatcgatctg gtctcttacg ctaacgaaat
    10861 gccggtttgt atgtacgccg gtgcggaatt tattgacggc aactacaccg gctggaaagc
    10921 aatgagcgaa gcccaacgtg ccgaatgctc ggcaatggcg gtgaaacaag atgtcaaact
    10981 gctcaacgaa aacatcgtca aatacacggt ggaaaaagca ttggagcgga ttatcccgaa
    11041 atacaagctc aacgctgaag agattgacta cttcctgccg cactactcgt ccggttcctt
    11101 ccgagataaa ttattggaag gtttacagcg gatcaatttc ctgatcccac aggaaaaatg
    11161 gttcaccaac ctgactacca aaggcaacac tgggtcagcc tcgatctaca ttatgctcga
    11221 tgaatttatc cgcacccacg atctcaaaca gggacaaaaa atcctctgct atgtgccgga
    11281 aagcggacgt ttttcgtctt gttttatgct tttggaagcg gtggtaaatt cgtaaaatcg
    11341 tagggacggg ggctattccc gtccaacaat catcggaaaa cgtatggaca tcaatgacat
    11401 tccccaagac aacagcaaaa tcttcaacgg cgaacgcaaa gtgatctacg cccgcaatcc
    11461 gcaaccagaa atccgccaaa tgatctcctc tattctcgct tgctacgctt gggacgaaaa
    11521 caacccgttt gtagcgaagt ctgatgcacg gttgaaggca ttggcggaag ttgttggtaa
    11581 agcagaaatt ggcgattaag tttgattttg tgctttacag ggtcgcagat tatctgtata
    11641 atttgcgacc ttaacttgcg agagcaagct gatggtgctt agcctatcta agccccgtct
    11701 aagactgtag gggtgaaaac ttaataatcc tacatagatg gtgaacagac agaattctct
    11761 gcttctggac accttaggct caaagaagat tgcagtttgt agcaatgcaa gcggtaatat
    11821 ttttgggatt ttttgtaaat tctgcttgaa aaggcagagt gtatcaggag ctaaaaccaa
    11881 tggcattaaa tcttcaagac aaacaagcga ttgttgctga agtaaacgaa gctgccaaag
    11941 gtgcactttc agctgttgtt gcggattctc gcggtgtaac agttgaaaaa atgactgagt
    12001 tacgtaaagc agctcgtgaa gctggtgtga caatgcaagt tgtacgtaat actttattac
    12061 gtcgtgcagt ggaaggcacc gagttcgagt gcttaacaga tacgtttacc ggtccaactc
    12121 ttatcgcatt ctcaaatgaa cacccaggtg cagcagcacg tttattcact gaatttgcga
    12181 aaacaaacaa agagtttgaa cttaaaggtg cagcctttga aggtaaaaaa caagatgttg
    12241 cattcttagc aaccttacca acttacgaag aagcaattgc acgtttaatg ggcacaatga
    12301 aagaagctgc ggcaggcaaa cttgttcgca ctcttgcagc attacgcgat caaatggaag
    12361 cagcagctta attttaagca ctcttcttta ttcgtttaac aacttatttt actttaggaa
    12421 tcgattgtta tgtcattaac taacgaacaa atcattgaag cgattgcttc taaatcagta
    12481 tcagaaatcg ttgaattaat cactgcgatg gaagaaaaat tcggtgtttc agcagcggca
    12541 gcagtagcag cagctccagc agcaggcgca gcggcagcag aagagaaaac tgagtttgat
    12601 gtagtattag cagaagctgg tgcaaacaaa gttgctgtaa tcaaagcagt acgtggtgca
    12661 acaggtttag gcttaaaaga agctaaagac ttagtagaat cagctccagc tgcattaaaa
    12721 gaaggcatct ctaaagcaga agctgaagca cttaagaaag aattagaaga agctggcgcg
    12781 aaagtagaaa tcaaataatt tttgatttat tttgtcagaa cttcaagttc aacaaacccc
    12841 gatggaaaca tcggggtttt gttttttcag aattgtgtaa tgtagatatg attaccttta
    12901 tccattactt gcgcagcagt gaaaaatgta aaaattccac aaagtgatct gcccagtgca
    12961 tttcgtggtg gatttcattt gccataatcc gcaggcggat attgtctaac ggcacgccaa
    13021 tccgaatcag tgcttggtag taattgagcg aacaatcaat ataggtttgg ttcgtattag
    13081 agataaagtg cgaatcgatt tcatcgcctt cgttagtgcc aacctgaata aacactttgg
    13141 tattgggttg taacggatat tggtgcgtaa aacgcagaaa atccggctca ctaaaccaag
    13201 aggcaagcga aaacacccct aaatgcccga aaatatgtgg gtagcggctg cccatataag
    13261 cggtgataat gccacccatt gaactgcctg ccaataaggt atgttcttgc tgaggcttgg
    13321 tgcgatagtg aatatcaata aagggtttaa ccgtttccac cacccatttg gcatattcct
    13381 cccctaagcc tccggcattt cgggtttcag gggttgagcc ggtggttgtt ttccacgggc
    13441 cgtattcatt taagcgatta gctcctgcgt tatcaatgcc gacaataatc atcttcggta
    13501 attcttggtg tgatttaatg gttggaataa ttttccaaga atgccccgaa taagactctt
    13561 tgctgtaaaa cacattttgc ccgtcgtgca tatataacac cggataacgt tcccaacctt
    13621 cgttgtgata atccttcggc aatagtaccc gaatgcggcg gtgatggtgt aaatagggaa
    13681 catataaaaa atgctcctgc atttctaaat agtggttaag tggtttttgt accatcagtc
    13741 tgtccttttg cttaaattgt ggcgtatttt acaccttaat cagtctgagt taaaacaagc
    13801 ggtcagaaaa agtcaaaaat ttgcaaattg ctgttaccta acgcaatcgg ttgccttatg
    13861 cttttgagga atataaaaga gaaactgtga tctaagtcac agcaattttt attcggtttg
    13921 actaaaatcc gaactatcac ttaatagaga ggaaaatgtt atgcaggctt cattacaaga
    13981 tattcttgag gtagtaaaag caaaaaatct cacttatcag caaaaattga tgagtttagg
    14041 caatattgct gagcggttat ttaacccgat tgaactactt ggctacactg aagaagagtg
    14101 ggaacacatt gaaaatcaga tgatttgcga tttaaatgaa ggttatgcga tttatcgccc
    14161 acgttatatt ttgcctgatt ataatgtgta tatgcaaaaa ggttgccaat tcttagattt
    14221 acctccgcca accaatttag atgaagcctt agacggcttg ttaattctgt attcacacgt
    14281 tccgtccatt actacttttc cggtgtatat cgggcgttta gaccaactgt tagaaccgtt
    14341 tataaccgat gaagagcaag attacattaa aatcaagcgt ttcttaaatc atatcgataa
    14401 aaccatttcc gattctttct gccacgctaa catcgggccg aatgacacca aagccggtcg
    14461 tttaatctta aaagcggtga ttgagcttga aaacattaca ccgaatatga cgattcgtta
    14521 tgataaaacc aaaacatcgc gtgaatttgc cgaactggcg gcgaaagcgt gcttgttggt
    14581 gtccaaaccg tcttttgcta atgatgccta ctacattcaa gatttaggcg aagaatacgg
    14641 aattgcaagc tgttataacg ccttaccgga atgtggcggt gcttacactc tgacccgcct
    14701 gcgtttaggt actatcgggc gtgcttgtgc gagtgttgaa caaatggtca atgagatgct
    14761 gccgaaagtg gcaaaactcg ccctttccac gatggataaa cggcataaat tcttggtgga
    14821 agaaagcaat ttctttgaaa gtagcttctt ggttcaggag ggctttatca aacgtactaa
    14881 cttcacaagt atgattgcga ttgtaggtct tgctgatgcg gtgaatcatt tactcaagca
    14941 agaaggttta aatgaaacct ttgggcaaag caaacgtggc gatgaaattg cgacgctgat
    15001 tatggataag ctccaagcag taaatgacgc tcataaaggg ctgtatgttg aacgaaccaa
    15061 taaccaatat ctgttacacg ctcaagtggg ggcaaataac cacgctgaag acaaaatgaa
    15121 cacgccggca caccgcattc gtgtgggcga agagccaacc ttattggcac acttaaaaca
    15181 gtctgctcct ttccataaat atttcccatc cggtacgggg gatttattcg cctttgacca
    15241 aacctacact gatcatttag atgcggtggt ggatattatt gacggctcgt tcgcccaagg
    15301 ttatcgctac attaccactt acctgaaaaa tactgatttg attcgagtga caggctactt
    15361 ggtgaaaaaa agcgaggttg aacgttatcg caaaggcgaa gcggtattgc gtgataccac
    15421 ttggtatggt tcaggcaccg atgattgtgc gaaagtgttc gaccgccagc tgcgtgatga
    15481 agaaaatgtg aatgcagggt aacaatggct gcactttctg agatttttgt gccgttacac
    15541 cgcattatcc ccttctcgaa tgtagaaggg cagggcaatc gtaccagcat ttttctacaa
    15601 ggttgcaagc tgaattgcct gtattgccat aacccggaaa ccattccacg ttatagcaag
    15661 gaagcaaaac aggttagctt gcaatacttg tacgatcaag tgatggaggc agttcccttt
    15721 attcgaggag tcactatttc gggtggagag ccaaccattc atcataaaaa attagtgcca
    15781 ctgttcgagg cgttgcgtga gcaagggcta acctgttatt tagacagcag cggctttttt
    15841 gattttgagg caacagagcc gttaattaat gttaccgata aatttctgtt cgatctcaaa
    15901 ggagatgggg cgggcttaca aacgctatgc tttgatcgga aaaaccaagc cggcaaagtg
    15961 cctgaacagg ctcttccaaa cgtgaatcat attaaacctg aaaacttggc tcgcaatttg
    16021 caaaatttag ccaaattatt accgcttgat aaggtggaag aagtacgttt ggtttacctc
    16081 aatgagtttt ataacgccca ccatttgctc gaaaaagtgg ctgacctact taaaccttac
    16141 ccagatgtac tacttaaaat tattcgggta cacaccaaag gagcgagaga tgaaacaggc
    16201 ttggctcgtt ttgtacccac tatcgagcaa accgatgaac tggcagcatt tgcaaaacgg
    16261 cacggtattc aaaaagttat tactatttac taatggagac ttacgatgga tatactaatt
    16321 agcataattg gtgtttttgt gttattaggc ttaggtgttt tattatcaaa taatcgcaaa
    16381 gccattaaat ttcgcacaat tttgggcgct ttggcgattc aaattggttt tgccgctctt
    16441 attctttact ttccagcggg aagaaatgca ttgctagcta ctgcaaattg tgtgagcaat
    16501 attattaatt atggtaacga aggtattagc tttgtgtttg gcaatttagc gaatccgagt
    16561 aatagcagca ttggttttgt gtttgcggtt aaagtattgc ctattattat cttcttctct
    16621 gcgttaattt caatgcttta ctaccttggt gtgatgcaat gggtgattaa aattattggt
    16681 ggagcattac aaaaaacact aggcacttcc aaggcagaat caatgtcagc ggcagctaat
    16741 tatttttgtt ggtcagacag aagctcctct agttgtaaaa ccatacatta gccgtatgac
    16801 agagtcagaa ttatttgcca ttatggttgg tggaactgct tcaattgctg gttccgttat
    16861 ggctggttat gccggaatgg gcgttccttt aacttatctt attgcggcct cctttatggc
    16921 tgcaccagct gggttactat ttgctaaatt aatgtatcct caaacggaaa ccttggagag
    16981 taaagcagat gacaatgttg aagttgaaaa gccaaataac gtggttgagg ccctagctaa
    17041 tggtgctagt gcaggtgtta ctttggctat taatgtcggt gctatgttaa tagcatttat
    17101 tgcagtgatc gctttattaa atggctttat tggtggcatt ggtaattggt ttggttatga
    17161 ggggctaacc ttacaaattt tattaggtta tttattccaa ccacttgctt tcttaatcgg
    17221 tgtgccgtgg caagatgccg atattgcagg tcaaatgata ggtatgaaac ttgctgttaa
    17281 tgaatttgtc ggatatcttg agtttgctaa atatctacag cctgatgctg tggtgcaatt
    17341 aagcgataaa actaaggcaa taattacttt tgctttatgt ggttttgcaa actttagagc
    17401 aattgcggta ttgattagtg gtatcggaag tatggcacca agtcggcgtt cagatattgc
    17461 tcgtttaggt ttaaaagcag tgattggcgg cacattggcg aacttaatga gtgcaactat
    17521 agcgggtttc tttattggtt taagtggtgc cacattaggt tgatacaagc ggttaaattg
    17581 actcactttt ttgcaaaaag cccaagtaag ttaaatgact acttgggctt tgtttaatga
    17641 actagctctt agtttcggtt tttgctgtgt tatccttttc cgctttggct gtctgtgttt
    17701 tcgaagttgt ctgttttttt gcggattggc tagcagtagc tgcttttctt actttctttg
    17761 ttttaacttc tacttccgca tttttagagt ttttatccgc taaccatgcc tgcactttag
    17821 ctaagaatat ttgtcccatc gggcgaggat cgccagaaaa taatgtttgt aatttattat
    17881 tttcaataat gtcgcgtcta attgctaagc gttcttcgtg gttttccgct aaacgaatag
    17941 cttgagtaac gtattcctct gctgtttggg taattaacca attaggtagc ccgaggcgct
    18001 taaataaacc ttcatcaata tgttcatgaa cttcagggcc tgttttacag acaccaacta
    18061 aaccaagcgt aaccatatcg ataatgccgt ttgtatttcc aaatgggaat ggatttagca
    18121 tcatatcgca attatgtaga atatttagat attcatcata tggcgaatgt gggtgtgcgg
    18181 ttgcatcatt tcctaaatag cttttgataa aacgttccac ataaggatgc gtaattccac
    18241 tagattgccc taatgcaaaa tggaaatgag tttttacctt cgccctatca cgaatggctt
    18301 ttaatgcctc taagaaatat gggtttaatt tcatagtggt tgatgcaatt ccgatatgga
    18361 taacctctgg attttcacgt aggttataga ccacattttg aggcgctaat gcggaaggca
    18421 catagggtag cgcatctttt ggaagacgta ataattgttc actaaagcag ctttcggaac
    18481 caacatagtc atcttctacg atgacatatt caataaaatc agagtgtgta gttgccggat
    18541 gacctagcgc aacagcttga attggtgcta ggcgagtgtt actagcgaaa atagtggtta
    18601 aatccattcc aatgctaggc atatagaata cggctggatt atttttatca cagatatctt
    18661 ttaaaaagct taagcggtca aatagtgagc catcttgtgg taataaatga aattcgtcga
    18721 atacctgttg ccccatttca tctacagcat cactgcctag cccaataaga tggaaatgtt
    18781 cgcgtgcagc aaccattgag gttgaatgag tacgataaat agaatgtgat gaatggaaat
    18841 gctccaataa tactaccatg acaggtttat tatttctggt accaagctgt tcaatttttc
    18901 tatcttccca accgacagaa agtaaatgac gacgaattac agcatttaac gaccgtttta
    18961 cattatgttt atttgcttca atatcataac tgcaatgcat ataaacatcg tgtgaaatgg
    19021 cgctcggtag cttgttcaag ttttcaattt gcgctaattt ttctgggaac cattgcaaaa
    19081 tagccgcgcg ttttgcaaaa gcagaggatg taccaataaa tctaggtgat tggagtgcaa
    19141 aacaaagtga tgcggtgaga tctgatgaag cattccatgc agcatctaga ttcaataaaa
    19201 tattagattc cggtaagtat aaaatacaga acttaattag tgcttgtaat gtggcatcta
    19261 aatcaaccgt atttggatta gcagattctt tatttctatt gtaagtacgc aagatatggt
    19321 ctgcgtttac gtatggagaa ctggcaaaaa ttaatgctat ccagcgttgt aatgtcagaa
    19381 aacgcatagc accgtgttcg gagatctcta atgcaggatc ttcaaacaag cgagtaatcg
    19441 ctaccgccat tcgagtacag aaatagatag ctttatcatt ttctaaattt tcaatctgct
    19501 ctggcatatt caattcaata ttggaaatgc caccaaaatt actatctaat tttgaaagga
    19561 tagacagtag ctcggtacaa gccgattcat aatctttttt cgcgaccgcc tgctcaaaac
    19621 ggatgacgct aggcatattt tctgctgaca taatgtatcc ttagttgttt aaaattcccc
    19681 acagatcata ctcatctgca tgtgtaatgg ttactgaaat aatttgccct actgtcacta
    19741 attggtttga aggattatct acatagacta caccgtcaat ttccggtgca tctgccattg
    19801 agcgaccgat aatgccttct tcgtcaatgt catcaataat tacttgtacg gttttgccga
    19861 tttttgcttg taagcgagca gcggaaattt cttgttgtag ttgcataaaa cggtggaaac
    19921 gttcctcttt tacttcttcc ggaacttgat ccggcatatc ggtagcaaca gcaccttcca
    19981 ctgggctgaa tttaaagcaa ccaacacgat ctaattgtgc ttcttttaag aaatcgagta
    20041 atagttggaa atcttcttct gtttcccctg ggaagccgac aataaaggta gaacgcagag
    20101 ttaattcagg gcaaatttca cgccattttt taatgcgttc taaggttctt tcgattgaac
    20161 ccgggcgttt catcgctttt aagattttcg ggctggcgtg ttggagtgga atatccaaat
    20221 acggcaaaat tttgccggca gccataagcg gaattaaatc atctacgtgt gggtatgggt
    20281 aaacatagtg caaacgcacc cacacgccca ttgagcctaa ttgctcacat agcgtaatta
    20341 aattactttt aatcggcata ccgttccaga aaacggtttt ggttgcttct tcttttttgc
    20401 gatctaacga ataggctgag gtgtcttgtg agacgattaa cagctctttt accccggcat
    20461 caactaggcg ttttgcttca tctaatactt gcacgataga acggcttgct aaatcgccac
    20521 gcattgaagg aataatgcag aaagtgcagc gatgatcgca gccttcggaa attttcaaat
    20581 aagcgtaatg cttcggtgtt aatttaatcc cttgttttgg cactaagctg gtgtaagggt
    20641 taaattccgg ttttggcaca tatttatgga cgtggttcat taccgcctca tagctatgtg
    20701 gccctgtaat ttccaatact ttagggtgta cctcacgaat ttggttttct tttgccccta
    20761 aacagccggt gacaattact tttccgttag cttctaacgc ttcaccaatg ctttcaagag
    20821 attcttgtac tgcggaatca ataaaaccgc aggtgtttac aatcacaaga tccgcatttt
    20881 cataactagg gatgatgtta taaccatccg cacgcagttc ggtcaaaata cgttcggaat
    20941 caactaaatt tttagggcag cctaagctga taaaaccaat atttggtgaa gcactcatat
    21001 aactctcaat aactaaaaag aaaaatgcct acaatttttg tctgtaggca aaaaactaac
    21061 aagattctac aaaatcttgc ccaaaatagc gataacaagc ggtcaatttt taataaacat
    21121 ttacaaactt gaaatttcgc taacaattaa aattaatcga tattatttag cattgctaat
    21181 acaatcgtgg aagatttttc tgcggctaat ggcagaaatt cttcaaaaga aaggtgggat
    21241 tctttgtccg ctacatccga tactgctctt acgattacaa atggaaggtt aaaaccgtga
    21301 caaacctgcg caatggctgc tgcttccatt tcgactgcaa cgacattcgg gaaattctga
    21361 cgaatttgat taatcttatc attaccgtta ataaaggcat cgccgctaca gattaagcct
    21421 gaaaccacat tgtaaccggc ttttttcgct tccttttgag ctaattcgac taattgctcg
    21481 tttggcgaaa atgttggcgg gtttgccggt agttgcccga tttcataacc aaaggcggtc
    21541 acatcaacat cgtgataacg aacttcggtt gaaatcaaaa tatcacctac gtttaaatct
    21601 ggatctaatc caccggcaga gcctgtatta ataatcatat ccggctgggt gagctgtatc
    21661 agtaaggtag tgccgatggc ggcagcaact ttgccgatac ccgattgtaa taatgccaca
    21721 cgggtattgt taattttgcc ttcaaaaatt ttacaacctg ctaattcagt gactttaggt
    21781 tcaaccatta cttggcgtaa aatctcaatt tcttgtgcca tcgcaccaat aataccaatt
    21841 ttcattactt tccttctcta atgtattgtt tattttttga aaaaaacgct attttaacag
    21901 cattaatagt gaggaggggg tgtttcttct gcttgtgaag caacttggct tagttgagcc
    21961 cctttcaatt tctcagcaat atggcgaatc tgagtttgta acttatcaat tgcaaattgt
    22021 tgctcaataa gtgcttgatt taactcttca ataatcagct cttggaaagc aactttagtc
    22081 tccaattcgg taatttttgc cgataatgta taattattat ccatttttta ctaaaaaaag
    22141 gttgtgtgaa aaggaattac actttaccct atcttaaatt ttcttaacag ttatttttat
    22201 aaggaaaaat tatgttaaaa accaaattat cattatttac tcttattgtt ggcacacttt
    22261 ttagtacaaa tgtgatggca gaagaaaaag cagatcctaa atttgtggat gattcctctt
    22321 atgccgtggg tgtattaatg ggtaaaaata ttaatggtgt gattgagtca caaaaggata
    22381 tttttaccta taaccaggat aaaatcttag ccggtgttca ggacacctta aagaaaaccg
    22441 gtaaattaac cgatgaagat ttgcaaaagc agttaaaatc gttagatgcc tatttatctg
    22501 cgaaagaagc aaagattaac gaagaaaaaa ccaaagcaac ggtagctgca ggcgataaat
    22561 tccgtgctga ttataaaaaa cagtctggcg taaaagaaac ggcttcaggc ctgttatata
    22621 aaattgaaaa agcaggtgaa ggcaattcac caaaagcgga agatactgtg aaggtgcatt
    22681 acaaaggcac tttgactgat ggcacggtat ttgacagctc ttacgaccgt ggtgagccga
    22741 ttgaatttca gttaaatcaa ttaattccgg gttggattga agcgattcct atgttgaaaa
    22801 aaggcggtaa gatggaaatt gtagtgccac ctgcattagc ttatggtgat cgtgccgcag
    22861 gcaaaattcc agcaaattca accttgaaat ttgaaattga attattagat tttaaagcag
    22921 cagatgctaa gaaataattc gttattcctt aattattgaa gatacgtaag cggttagatt
    22981 tattataata tttgcaaaaa atgtgataaa actaaccgct tgtaatttgt attatgacca
    23041 aaaaatttac gcctttttct gacgaagatc acgccattct tgcttcttac tttccgatgg
    23101 tagatgggat tgcggcactg attggtgagc attgcgaaat tgtattgcat tcgttagagt
    23161 ttctggaaca ttcggcaatt tatattgcta acggacacaa tactaaccgt aaaatcggct
    23221 ctccgattac tgaccgtgca ttgaaatcgc tgcatcatat ggcaacggat agcgtctcca
    23281 aaccttattt taccaaggca aaaggtggcg ttttaatgaa gtctatcact attgcgattc
    23341 gtaatggtaa acagcacgtt atcgggttac tgtgcattaa tattaatttg gaagtgccta
    23401 cctcacagtt tctcaattct tttattgccc ctgtagatac cgcttcagaa gttacttttg
    23461 ccagttcagt agaagatttg gtttcacaaa cgattcaaac gaccattgat gatgtgatgg
    23521 cagatcgtca aatttctaac aataataaaa atcgtcaaat tgtgatttcg ttatttgaga
    23581 aagggatttt tgatattaaa gattccatta accaagtagc ggagaagctg gatatttcac
    23641 gccatactgt gtatctctat attcgtcaaa ttaagcagga caatgattaa tggattatgt
    23701 attagcgata aaatcaccgg tttatggttc acaaggggca tttttagcct accaagtggc
    23761 ggaagaatta ttaaaagcca atcatacaat ttgccaaata ttcttttttc aagaaggcgt
    23821 gagcaatgct aatgccttag tgaatccagc aagcgatgaa gtgaatttag tcgagatgtg
    23881 gaaaaaattg gctaaattgc accgcttgcc tctgcatttg tgcattgctg ctgcccagcg
    23941 tagaggcgtg gtggatgagc aaatctcagc taatgcaaca cataatttag ccgaaggatt
    24001 taccctagcc gggttaggcg aatttagcca agcagtatta aaagcggatc gattactgac
    24061 tttttaagat gaagaaatat aaacttgcct ttttatttac ccagccacct tttggttcgg
    24121 cagttagccg tgaggggcta gatgccttgc ttgcagctag tgctttttgt gacgagcaag
    24181 agatagctat cctctttatc aatgatggcg tatttaatct cattgccgat caacagccgg
    24241 aaaaactctt acaaaaagat catatttcca ccttcaaatt attggagttg tatgacttaa
    24301 ctgaatgttt tatttgccaa gaaagtgtaa gtttacgagg gctggataat gcagattggt
    24361 tactgcgaat gcttcaattt aaaactcacg ctgagatgat cgcattgctc aatcaagctg
    24421 aaaaagtaat gacgttttaa ggaatattta tgctttatac cctttccaaa gcgaattatg
    24481 atgaagaaac cttaaacttc tttttctcac atcttagtga gaacgatgcg gttgttctgt
    24541 ggcaagatgg cgtgctacaa gcggtcaaaa gtccgcaatt ttttgcaaaa ttgccccgtt
    24601 gctatttatt ggcacaagat gtgcaagctc gaggattgca agagaagctc actgcatttc
    24661 agtgcatttc attatccgaa ttagtcaaat taacagcggt ttattttccc caggttgcac
    24721 tgtaacctag agaggatatt ttttgtaata ccaaataatt tagattatga tgtgattcct
    24781 aaaaaggaga atattatgaa aacaaaatgt cttattccgc tactagcact tacacctgtt
    24841 atggtgatgg cagaagaaaa taacacttgg gtagacaaga aacatgaaac agtaagcact
    24901 accttagatc gttgggcaaa caatattaac agttggctag gtgatgcaga cccagataaa
    24961 ccgggaacgg cttctttacg ggtaatgtta gatagccgtt gggataaaca cgataaattt
    25021 acttataagc cccgtgttcg tggtaaaatc aaactcccta tcttgaaaaa gcatctaaat
    25081 gtcgtatttg gtgatgacga actggataat gagcttaccg ataaaaatca tgctggaaaa
    25141 ttgtataaaa acgtcaatcc aaataaacgc tataactctc gtgaagcgag agattcgaac
    25201 tcttctatcg gtttacgttg gtctgatggc attaaggctt tagggattga gaccgattta
    25261 gatgctggta ttcgttcggg aagcgatatt ttcgggcgtt tacgcatcag taaagattgg
    25321 aaaatcaccg accagttcag tacccgccta gagcaaattt atcgttacgg ttcagagagc
    25381 aagcactatt tacgtactaa ctttgaaaat aaatataccg aaacggatac cacctttatt
    25441 atgaaccaca ccaattttga atatcgtcat gatgtagatg aagaaagaag ttgggggaat
    25501 agtttatatc gtcaacataa cttcaaacca ctcacgcaca tcagctatgg tatcagtatg
    25561 ggggggcgtt tagataaaga gttatcaaaa tttaactatt ggggtccatt tgtctcctat
    25621 cgtcaaccaa tctggcgcaa ctggctcttt atccagcctg aaatcagttt ttataacgac
    25681 aaagataaag atcgtaagca ctttattcag acatttgtac gtttagaggc tatcttctag
    25741 ctattaagcc tcaagtagaa tcttggggct tgtttttgca agcggtcaat ttcttgccaa
    25801 aatttacaaa atccgctata attcctaacc atttttagca aaaattggct gacggcttga
    25861 ccggtcagcc ttttgtgctt gaacgcaagg gctgattttg tcattttaat cagcaaaatt
    25921 tgcaaatttc ctgcccaatt tgaccgcttg cagtagcgat ttctgactgc ttgattggcg
    25981 attggaaaat gacatctcgt acagttttta taatgccact tccaaccgag tctttcgtgt
    26041 cggattgtgt aatctcaacc aaaatatatt tcagaggcta tcttaaaaaa tggcatattc
    26101 atattccgag aaaaagcgta tccgtaagag ctttggcaaa cgcccacaag ttctgaacgt
    26161 accttatcta ttaacaattc agcttgattc ttttgaaaaa tttatcgaaa aagatcctga
    26221 agggcagcaa ggtttagaag cggcattccg ttctgttttc ccgattgtga gcaacaatgg
    26281 tgcaacagaa ttacaatacg tttcttacga attaggcgag ccggtgtttg acgtgcgtga
    26341 gtgccaaatt cgtggtacaa cctacgctgc accattacgc gtgaaattgc gtttagtctc
    26401 ttacgatcgt gaagccgcag ccggtacggt aaaagacatt aaagagcaaa acgtgtatat
    26461 gggcgaaatc ccattaatga ccgataacgg tactttcgtg attaacggca ccgagcgtgt
    26521 tatcgtttct caattacacc gtagcccagg tgtgttcttc gattctgaca aaggtaaaac
    26581 ccactcttcg ggtaaagtgc tttataacgc acgcattatc ccttaccgtg gttcttggtt
    26641 agatttcgag tttgatccga aagataactt atttgcccgt atcgaccgcc gtcgtaaatt
    26701 gccggcaacc attattctac gtgcattagg ctacaccacc gaagaaatct taaatttatt
    26761 cttcgagaaa attaaatttg aaattgccga taataaatta ttgatgacgt tagtgcctga
    26821 gcgtttaaga ggcgagactg catcatttga tattgcagca aacggcaaag tatatgttga
    26881 aatgggtcgc cgtattaccg ctcgtcatat ccgtgcgtta gaaaaagaca atgtgaccca
    26941 aattgaagtg ccggtggaat atattgtcgg caaagtagcg gctcaagatt acgttgattt
    27001 atcttcaggt gaagtgattt gcccggcgaa tatggaaatc tcgatggaga tgttggcgaa
    27061 tttatcacaa gccggttaca accagatcga agtattattt accaacgatt tagaccacgg
    27121 tccatatatt tctgaaacct tacgtgttga tccaacttac gaccgtttaa gtgcgttggt
    27181 tgaaatctat cgtatgatgc gtccgggcga accaccaacg aaagaagcgg cagaagcatt
    27241 attcgataat atgttcttct cggcagagcg ttatgattta tcggcagtag gtcgtatgaa
    27301 attcaatcgc tcgttagaaa ttccggaagg cgtaggcagc ggtattttaa gcaacgatga
    27361 catcatcggt gtgatgaaaa aattaatcga aatccgtaac ggtcgtggtg aagtggatga
    27421 tatcgaccac ttaggtaacc gtcgtatccg cagcgttggt gaaatggcag aaaaccaatt
    27481 ccgcattggt ttggtgcgtg tagaacgtgc ggtgcgtgag cgtttatctt taggcgattt
    27541 agatggtgta acaccacaag atttaatcaa cgctaaaccg atttcagcag cagtgaaaga
    27601 gttctttggt tcatcacaac tttcgcaatt tatggaccaa aacaacccgc tttcagaggt
    27661 aacacataaa cgccgtatct cggcattagg cccgggtggt ttaacccgtg agcgtgccgg
    27721 ctttgaagtg cgtgacgtac acccgactca ctatggtcgt ttatgtccaa tcgaaactcc
    27781 tgaaggcccg aatatcggtt tgatcaactc actatcggtg tatgctcgta ctaataacta
    27841 cggtttctta gagactccat tccgtaaagt ggtgaatggt caagtaaccg aagagatcga
    27901 gtatttatct gcgattgaag aaagcaacaa tatcattgca caggcgaact caaacttaga
    27961 tgagaacttc cgttttaccg atacttatgt aacttgccgt cagcaaggcg aatcgggctt
    28021 attcaaaccg gaagaagttc aatatatgga catctcaacc caacaagtgg tttctgtggc
    28081 tgcggcgtta attccgttcc ttgagcacga cgatgcgaac cgtgcgttaa tgggtgcgaa
    28141 catgcaacgt caggcagttc caaccttgcg tgcggacaaa ccattagtcg gtaccggtat
    28201 ggaaaaacca attgctcttg actcaggtgt agcgattgtc gcaaaacgtg gtggtacggt
    28261 gcagtatgtt gatgcgtcac gcattgtagt gaaagtaaat gaagatgaaa ccattccggg
    28321 cgaagcgggt atcgatattt ataacttaat caaatacacc cgttcaaacc aaaacacctg
    28381 tatcaaccaa gtaccttgtg tgaacttggg tgagccggtt gctcgtggtg aaatcttagc
    28441 ggacggtcct tcaacagact taggtgaatt ggcattaggt caaaatatcc gtgtggcatt
    28501 tatgccttgg aacggttata acttcgaaga ctcaatgtta gtttctgagc gtgtggtaca
    28561 agaagatcgc tttaccacta tccacattca agaattatct tgtgtggcgc gtgataccaa
    28621 attaggtgca gaagagatca ccgctgatat tccaaacgtg ggtgaatctg cattaagcaa
    28681 attagatgaa tcaggtatcg tttacatcgg tgcagaagtg aaaggtggcg acatcttagt
    28741 aggtaaagta actcctaaag gtgaaaccca attaacaccg gaagaaaaac tattgcgtgc
    28801 gatcttcggt gaaaaagcct ctgatgtgaa agattcatca ttgcgtgttc caaacggtac
    28861 ttcaggtacg gttatcgatg ttcaagtatt tacccgtgat ggcgtagaga aagataaacg
    28921 tgcgaaagaa atcgaagaga tgcaactgtg tgaagcgaag aaagacttag cggaagagtt
    28981 ggaaatctta gaagccggtt tatttactcg tgttcgcaac ctattaattg aaggcggcgt
    29041 aaaagaatct gcattagatg gcgttgctcg tgaaaaatgg ttagaacaaa cccttgaaga
    29101 cgaagcgaag caaaatcagt tagaacagtt agcggaacag cacgaagagt tacgcaaaga
    29161 atttgaacgt aaacttgaga tcaaacgcaa caaaattatc caaggcgacg atttagcacc
    29221 gggtgtgtta aaagtagtga aagtttacct tgcggtgaaa cgccaaatcc agccgggtga
    29281 taagatggcg ggtcgtcacg gtaacaaagg ggttatctcg aaaatcaacc ctgtggaaga
    29341 tatgccatac gatgaaaacg gtcagccggt tgaaatcgta ttgaacccgc tgggcgtacc
    29401 gtctcgtatg aacatcggtc agatcttaga aacccactta ggcttagcgg ctcatggtat
    29461 cggtgatcag attgataaga tgatcaaaca gcaacaagaa gtggctaaat tacgtgaata
    29521 tatgcaaaaa gcctacgatt taggtcacgg ctcacaagtc gttgatttaa gcactttctc
    29581 tgatgaagaa gtgatgcgtt tagcgcaaaa cttacgcaaa ggcttaccgc ttgctactcc
    29641 ggtattcgat ggtgcacacg aaagcgaaat caaaggctta ttagagttag gcggcttacc
    29701 gacttcaggt cagatcacac tttatgatgg tcgtaccggt gagaaatttg agcgtccggt
    29761 aaccgttggt tatatgtata tgctcaaatt gaaccacttg gttgatgata aaatgcacgc
    29821 tcgttcaacc ggttcttata gccttgttac tcaacaacca ttgggtggta aagctcaatt
    29881 cggtggtcag cgtttcggtg agatggaggt ttgggcatta gaagcatacg gtgcggctta
    29941 tactcttcaa gaaatgctta cggtgaaatc ggacgatgtg aacggtcgta cgaagatgta
    30001 taaaaacatt gtagatggta cacattatat ggagccgggt atccctgaat cctttaacgt
    30061 aattaccaaa gagatccgtg cattagcaat tgatatggag ctggacgaag cgtaatggtt
    30121 tcactctccc ccttgatggg ggagagacag gcaaaggatt tgttcagaat cctttggcag
    30181 agagagggtg atgcaagcgg tgtaaatttg ctaaattttt gcaaaaatcg accgcttacc
    30241 ctctccctga ttttgcttct gaacgaggca aaatctatcc ctctcccaca aggggagagg
    30301 gtttaaaatc gcaaccaaat tcgtagagtg gatattcttt ccaccaaaca aaacaacctc
    30361 aaactagggg caaaaaagtg aaagacttag tgaagttttt aaaagcacaa acaaaatcga
    30421 acgaagattt tgatgtgatt aaaattggtt tagcatcacc ggacaagatc cgttcttggt
    30481 cttttggtga agtgaaaaaa ccggaaacca ttaactatcg taccttcaaa ccggagcgtg
    30541 atggtttatt ctgtgcacgt attttcgggc cggtaaaaga ttacgagtgc ttgtgtggga
    30601 aatacaaacg tttaaaacac cgtggcgtaa tttgtgaaaa atgtggtgtt gaagtaaccc
    30661 aaactaaagt acgtcgtgag cgtatggggc acattgaatt agcttgccct gtcgcacaca
    30721 tctggttctt aaaatcacta ccgtcccgta tcggtttaat cttagatatg ccgttgcgtg
    30781 atattgaacg tgtgctttat tttgaatctt atgtagttac tgaaccggga atgaccgatt
    30841 tagagaaaaa tcagttatta accgaagaac aatttatgga cgctgaagag cgttggggtg
    30901 atgaatttga agcgaaaatg ggtgcagaag gtatccaagc attacttcgt gatttagatt
    30961 tagaacacca atgcgaaacc ttgcgtgaag agttacaaga aaccaattca gaaaccaagc
    31021 gtaaaaaaat cactaagcgt ttaaaaacct tagaagcatt cttacaatcc ggcaacaaac
    31081 cggaatggat ggtgatgaca gtattaccgg tacttccacc ggatttacgt ccgttagtac
    31141 cgcttgacgg tggacgtttt gcgacttctg acttaaacga tttataccgc cgtgtaatta
    31201 accgtaacaa ccgtttaaaa cgcttgttag atttagttgc accggacatc atcgtgcgta
    31261 acgaaaaacg tatgttacaa gagtcggttg atgcgttatt agacaacggt cgccgtggtc
    31321 gtgcgattac cggttcgaac aaacgtccgt taaaatcttt ggcagatatg atcaaaggta
    31381 aacaaggtcg tttccgtcaa aacttattag gtaaacgtgt agattactca ggtcgttcgg
    31441 taattaccgt aggcccatac ttacgcttac accaatgtgg tttaccgaag aaaatggcgt
    31501 tggaattatt ccgtccgttt atctactcaa aattagaaaa ccgtggcatt gcttcaacta
    31561 ttaaagccgc gaagaaaatg gtagagcgtg aagatcctat cgtatgggat attcttgccg
    31621 aagtgattcg tgaacacccg attctactta accgtgcacc aacacttcac cgtttaggta
    31681 tccaagcgtt tgagccgtta ttgattgaag gtaaagcgat ccagttacac ccactcgtgt
    31741 gtgcggcgtt caatgcggac ttcgacggtg accaaatggc ggttcacgtt ccattaaccc
    31801 ttgaagcaca gttagaagct cgtgcgttaa tgatgtcaac caacaacgta ctttcaccgg
    31861 caagtggtga tccgattatc gtaccgtctc aggacgttgt actcggtctt tactatatga
    31921 cccgtgagaa agtaaacggt aaaggtgagg gaatgtactt ccttgaccct cgtgaagcgg
    31981 aaaaagcata ccgtaccggt caggctgaat tacattctcg tgttaaagtg cgtgttactg
    32041 aatatgagaa aaacgaagca ggcgaattag aagcaaaaac ttcgttagta gataccacca
    32101 ttggtcgttc aatcttatgg atgattgcac caaaaggtat gccgtttagc ttgttcaacc
    32161 aaaccttagg caaaaaagcg atctcgaaat taattaacga gagctatcgc cgtttaggtt
    32221 taaaagaatc tgtggtttta gctgaccaaa ttatgtacac cggctttgct tatgctgctc
    32281 gttctggtgc ctcagtaggt atcgacgata tggtaattcc ggagcaaaaa tacgcaatca
    32341 ttgaagcggc tgaagcggaa gtcgctgaga tccaagagca attcaacggc ggtttagtaa
    32401 cagccggtga gcgttataac aaagtgatcg atatttgggc tgctgcaaac gaacgtgttg
    32461 cgaaagcaat gatggaaaac ctttcaacgg aagaagtaat caaccgtgaa ggtaatccgg
    32521 aaaaacaagc ctcatttaac agtatcttta tgatggcgga ctccggtgct cgtggttctg
    32581 ctgcacagat tcgtcagtta gcgggtatgc gtggcttgat ggctcgtccg gacggttcga
    32641 ttatcgaaac cccaattact gcaaacttcc gtgaaggttt gaacgtatta cagtacttta
    32701 tttcaaccca cggtgcacgt aaaggtcttg ccgatacggc attaaaaaca gcgaactccg
    32761 gttacttaac ccgtcgttta gttgatgtgg cacaagattt agttatcatt gaagatgact
    32821 gtggtacgca cgaaggtatc gtgatgacac cacttatcga aggtggtgat gtgaaagaag
    32881 ccctgcgtga tcgtgtatta ggtcgtgtgg tggcagaaga tgtgttaaaa ccgggtacag
    32941 atgaagtatt aattccacgc aacaccttat tagatgaaaa atggtgtgat gtggtggatc
    33001 gtgaatctgt ggatgtgatc aaagtacgtt cggtagtaac ttgtgataca gacttcggtg
    33061 tgtgtgctaa atgttacgga cgtgacttgg ctcgtggtca cttaatcaac caaggtgaag
    33121 cggtcggtgt tattgcggca caatctatcg gtgagccggg tacacagtta acgatgcgta
    33181 cgttccatat cggtggtgcg gcttctgcgg cagcaaaaga atctagcatc caagtgaaaa
    33241 acgcaggtac gattaaatta accaacgcta aatttgtaac caacaaagaa ggcaaaatcg
    33301 tattaacttc tcgtaatact gaattaactg tcatcgacac cttcggtcgt accaaagaaa
    33361 actataaagt gccttatggt gcggtgcttt ctaaacacga cggtgcagaa gtggctgtgg
    33421 gtgaagtggt tgcgaactgg gatccgcaca caatgccggt aatctcagag gtatcaggtc
    33481 gtatccaatt tagcgacatc gtagatggct taaccgttac tcgccaaacc gatgaattaa
    33541 ccggtttatc atctatcgtg gtgcaagatg tgggtgaacg tgcaaccgca ggtaaagatt
    33601 tacgtccggc attacgctta gttgatagca acggcaaaga catcttaatt ccgggtacag
    33661 acgttgcagc acaatacttc ttaccgggta aagcaatcgt aaccttagac gatggtgcag
    33721 aaattgaagt cggtgaagcc ttagcccgta ttccacaaga atctgtgggg acgaaagata
    33781 ttaccggtgg tcttccacgc gtagcagact tattcgaagc ccgtaaaccg aaagagccgg
    33841 caatcttggc ggaaatttca ggtattgtgt cgttcggtaa agaaaccaaa ggtaaacgcc
    33901 gcttggtaat tactccggcg gaaggcgaag cgtttgaaga gatgattcca aaatggcgtc
    33961 agctcaacgt atttgaaggc gagatggtac aacgtggtga tgtgatatca gacggtgcag
    34021 aaactccgca cgacatctta cgcttacgtg gcgttcacgc cgttaccgac tacatcgtaa
    34081 acgaagtgca agaagtttac cgcttacaag gggtaaaaat taacgacaag cacatcgaag
    34141 tgattgttcg ccaaatgttg cgtaaagctg tgatcaccaa cgcttacgac tctgaattct
    34201 tagagggcga acaagtggaa gtggctcgtg tgaaaattgc caaccgcaaa cgtgctgaag
    34261 aaggcaaacc gttggtagaa tttgaacgtg aattgcttgg tattaccaaa gcatctcttg
    34321 caacagaaag ctttatttct gcagcctcgt tccaagaaac cactcgagtg cttaccgaag
    34381 ccgcagtggc aggtaaacaa gatgaattgc gtggcttaaa agagaacgta atcgttggtc
    34441 gcttaatccc ggcaggtacc ggttttgctt accaccaagc acgagctaaa aaacgtgccc
    34501 aactggaagc aggaattgca gttgtccctg aatttgaagc accggcagct aaagccaatt
    34561 cattcgttac cgatgcagac atcgaagctg aatttgaatt tgttgcagac gatgcaaccc
    34621 aaagtttagc agcgttgtta aatgcgggtg aggaagagta atagctcgta gggtatgata
    34681 aattaaaaaa
//
LOCUS       DANLXO010000015        32194 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.015, whole genome shotgun sequence.
ACCESSION   DANLXO010000015 DANLXO010000000
VERSION     DANLXO010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32194)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32194)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32194
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.015"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(264..1268)
                     /gene="gap"
                     /locus_tag="PXD69_000599"
     CDS             complement(264..1268)
                     /gene="gap"
                     /locus_tag="PXD69_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDL6282825.1"
                     /translation="MAIKIGINGFGRIGRIVFRAAQHRDDIEVVGINDLIDVDYMAYM
                     LKYDSTHGRFDGTVEVKDGQLVVNGKAIRVTAERDPANLKWNEIGVDIAVEATGLFLD
                     DETARKHITAGAKKVVLTGPSKDATPMFVNGVNFDTYAGQDIVSNASCTTNCLAPLAK
                     VIHEKFGIKEGLMTTVHATTATQKTVDGPSAKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPALNGKLTGMAFRVPTTNVSVVDLTVNLEKPATYAEICAEIKRASENEMKGVLGYTE
                     DAVVSTDFNGATETSVFDAAAGIALTDTFVKLVSWYDNEVGYSNKVLDLVAHVYNYKG
                     "
     gene            1493..1888
                     /gene="msrB"
                     /locus_tag="PXD69_000600"
     CDS             1493..1888
                     /gene="msrB"
                     /locus_tag="PXD69_000600"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDL6282826.1"
                     /translation="MIKPIHALTEQQVDILINHGTERPFTGKFLNEHRVGIYRCARCH
                     NDLFHSDTKFDAGCGWPSFYQTISESSLRYLDDYSLGRHRIEIRCGNCDSHMGHVFPD
                     GPPPTGLRFCLNSAALNFKWEETGEEIDG"
     gene            complement(1975..3057)
                     /gene="leuB"
                     /locus_tag="PXD69_000601"
     CDS             complement(1975..3057)
                     /gene="leuB"
                     /locus_tag="PXD69_000601"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDL6282827.1"
                     /translation="MQTYNIAVLAGDGIGPEVMAEAIKVLEATQQKFGFKLNFNQYNI
                     GGAAIDAQGKALPENTLKGCEEADAILFGSVGGPKWTHLLPDEQPERGSLLPLRKHFS
                     LFCNLRPAALYQGLEKFCPLRADIAAKGFDMVVVRELTGGIYFGQPKGRDGEGAQTRA
                     FDTEVYYKYEIERITRVAFESAMKRKKHVTSVDKANVLQSSILWRETVTEVAKEFPEV
                     TLEHMYIDNATMQLIKAPESFDILLCSNIFGDIISDEAAMITGSMGMLPSASLNEQGF
                     GLYEPAGGSAPDIAGKNIANPIAQILSAAMMLRYSFNLGDAADAIETAIQKALADGYR
                     TADLADDSKPLSTSEMGDIIAKNILA"
     gene            3187..3417
                     /locus_tag="PXD69_000602"
     CDS             3187..3417
                     /locus_tag="PXD69_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HDL6282828.1"
                     /translation="MKLTACKLVFLLYLMFNLTACGTVLSLVEQDYRVYAGVIKDFQV
                     MQEGGIFAVLAVIDLPLSFVLDTLMLPVTLSQ"
     gene            complement(3426..4478)
                     /locus_tag="PXD69_000603"
     CDS             complement(3426..4478)
                     /locus_tag="PXD69_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL6282829.1"
                     /translation="MALLDIRHLSIEIDMPKGRVKMVDNINLTVDEGEICGLVGESGS
                     GKSLIAKVICGMIKDEWIVSADRFRFDDIELLKLSPAERRKLVGDHISMVFQDPLTSL
                     DPSQQIGKQLMQTIQFRGKWWQRFGWKKKKAIELLHRVGIRDHQDIMKSYPSDITEGE
                     AQKVMIAMAVANQPRLLVADEPTNIMESTTQLQVYRLLSSMNQNLGTSILLVSNDMRS
                     IQNWVDSYNVLYCGQTVEIADKESILESSYHPYTRVLLNSSPDFSQPLAFKSSLNTLR
                     GSVPMLQEMPIGCRLGPRCPFAQKKCINKPPLVKVKQHEFACHFPINFREQNLLKNKT
                     ENTPFVVAEIAEKEAF"
     gene            complement(4549..5442)
                     /locus_tag="PXD69_000604"
     CDS             complement(4549..5442)
                     /locus_tag="PXD69_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6282830.1"
                     /translation="MAVIKEPEQFRETNAFKAFWFHFRQDKLALGSFYLFLLLLALIF
                     VGSLLAPYNYNEQFVGLELMPPSWDDKGQISHFLGTDDLGRDILSRIMYGFYYTLGSA
                     LMITLLIAIIGGMIGIYAGLKKGRSFWLISHLFDTFLFMPILLIAIIIATLMEASLVN
                     AMLAIFLAMLPHFIHKIYQATEKQLKKEYIITLKLDGASCWYLIREVIIPNLTGVAIK
                     ALSHIFVIAILDISALSFIMLGAKSPTPEWGAMIRESMELIYIAPWTVILPGLAIIFS
                     IFTVTILGTRLSVIFEKYRKE"
     gene            complement(5429..6394)
                     /locus_tag="PXD69_000605"
     CDS             complement(5429..6394)
                     /locus_tag="PXD69_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6282831.1"
                     /translation="MLIVFFRKIFLTLITLIFLSLISFNILLRDPLNHLAELGWFEAY
                     CYYVKSLLNGDFGISFSNGEPLTAQILQVFPATITLCLSALIVSLIIGLPLGFFAATQ
                     QKNMVGRLLNTLGSLSLAVPVFWLALVLMYYASLNQWEVSAIGEIHSLYPKQMVTGFL
                     LLDIWLSDVPYKLKMMQSALHHLALPTLVLAVPATLEVMHITQARAGYVMKQNYIKIA
                     KTRGWTPFRVWRTHIICNTLPALLPMIARTFILIFAFGMLIENIFSWGGIGRWLINAL
                     AIQDYNAISAGVVAIGVFVLLVDMVTGFVRVMLDPSDKKDWYGSY"
     gene            complement(6397..8148)
                     /locus_tag="PXD69_000606"
     CDS             complement(6397..8148)
                     /locus_tag="PXD69_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6282832.1"
                     /translation="MNKLAVIFSVCFANLGLNSTAYAAPSIPQELLENSLVYCTTSSG
                     FSFNPQKSDVSSNMNVVTEQIYDKLVEFNPKKNRLEPALAESYSISDDGLVITLRLRK
                     NVAFHTTPWFTPSRKLNAEDVVFSLKRMIGKESDLPEVKSEPESVLHHQRQSYIYQKT
                     AGQIYFPYFESVDLANKIASIHSPSNDIVKIELVRPDSALLAHLASQYAVILSKEYAL
                     QLNADDNLVQLDLLPVGTGVYQLESYENNDYVRLKPNMNYWGKKAYIQNMVVDFSTEA
                     TGRMAKFLNNECDVVAFPEPSQLSVLNNRQLISSKGANLVYLAFNMQRGIGQDLALRQ
                     RIARGINRKRIAEKLFYGTGEVADNLLPTALWSKKNNGSYPYQPHQNSGEQAVEMHDS
                     IINRSLDSKTETEEVNQKQRLKLWVIDEKRVYNQHPLKMAEMIRADLATQNLEVEIRA
                     VSRAYLVQQLANKSADYDLILGGWLANNLDPNSFLEALLSCKAAETVTNLSNWCNEDF
                     DFWLQTARLSDDPASANLLYEFAQKLLEEQLPILPLMNANRVLVIKDGVKQADISPFG
                     QVKLSELRLGLGHKKGN"
     gene            complement(8141..9100)
                     /locus_tag="PXD69_000607"
     CDS             complement(8141..9100)
                     /locus_tag="PXD69_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HDL6282833.1"
                     /translation="MVVNPESFEQIIGQSVKIKEVVEQAKKFANLDAPLLIQGETGTG
                     KDLFAKSCHHFGSRRMQKFIAVNCAGLPAEEAESEMFGHRGNGVESVGFFEYAHGGTV
                     LLDSISELSLEMQAKLLRFLNDGSFRRVGEDQEIQVNVRVICTSLQPLSLLVEKGKVR
                     EDLFHRLNVLTLNLPPLRDRKEDIPLLADYFIAQISNQLGVSKLEYDNVFLQALQNYH
                     WRGNLRELYNALYRACTLSHSYRLAVKDLHLPRDMEAMIEVREEATLEEMMSQYEAQL
                     LHQFYAEYPSTRKLAQRLGLSHTAVANKLRQYGLTKNGNSKDE"
     gene            9409..9990
                     /gene="lpcA"
                     /locus_tag="PXD69_000608"
     CDS             9409..9990
                     /gene="lpcA"
                     /locus_tag="PXD69_000608"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDL6282834.1"
                     /translation="MYLEQIKAELQEAADVLDKFMSDEKNIKLIQDAAMLIANSFKQG
                     GKVISCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFS
                     RYLEAVGQKGDVLFGLSTSGNSKNVLNAIKVAKEKGMKVIAMTGKDGGQMAGLADVEI
                     RVPHFRYADRIQEIHIKVIHILMMLIEFEMEKA"
     gene            complement(10031..10483)
                     /locus_tag="PXD69_000609"
     CDS             complement(10031..10483)
                     /locus_tag="PXD69_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HDL6282835.1"
                     /translation="MQFEQHFEANFWQNKSLLEMNDAEWEALCDGCGKCCYRKYIQGR
                     GRRERLYYTSVACNLLDVNTGRCMNYSNRFKIESDCTKLTKKNLPDFGWLPKTCAYRL
                     LYEGKPLFDWHPLISKDPDSVKNAGMLIANGIHEKDVIDWFEFVIDEV"
     gene            complement(10487..10807)
                     /locus_tag="PXD69_000610"
     CDS             complement(10487..10807)
                     /locus_tag="PXD69_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HDL6282836.1"
                     /translation="MIITTTPTIEGKQIVEYKGLVFGEVVSGANFIRDFLAGITDIIG
                     GRSGAYESKLNGARKEALAELAKEAQKVGANAVVGVSMEYQSMGGDKGMFIVVATGTA
                     VVIR"
     gene            complement(10804..11403)
                     /gene="rdgB"
                     /locus_tag="PXD69_000611"
     CDS             complement(10804..11403)
                     /gene="rdgB"
                     /locus_tag="PXD69_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDL6282837.1"
                     /translation="MEKTKIVLATSNADKVKEMADVLSQFGFEVVAQSEFGIESPEET
                     GLTFVENALIKARFAAKMTGLPAIADDSGLSVMALGGEPGLYSARYAGEQATDADNRQ
                     KLLAKMQGQENRLAKFVSCIVFLKHETDPTPYIASGECFGEILTEERGENGFGYDSLF
                     FYPPKACTFAELETKEKKAISHRAIALEQLKQQLAGENK"
     gene            complement(11446..11964)
                     /locus_tag="PXD69_000612"
     CDS             complement(11446..11964)
                     /locus_tag="PXD69_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL6282838.1"
                     /translation="MQFRKAVEADFETILAIYNQAIPTHQITADLELATTQNRRKWFD
                     FHLETAQYPIWVVEDEKGIAGWFSFSPFYERPAFLHTSEISIYLDRYSKGKGYGSKII
                     EFMQAEMLNHNIHTLMAYVFELNTVSQNLMRKHGFEQWGRFPNIANMGKDEKGEDKWR
                     TLLMMSYQKGIE"
     gene            complement(12015..13706)
                     /gene="narQ"
                     /locus_tag="PXD69_000613"
     CDS             complement(12015..13706)
                     /gene="narQ"
                     /locus_tag="PXD69_000613"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HDL6282839.1"
                     /translation="MIKAKYSIARRIGLYFLIMIGFASIISGISLGIMWSNKSDASLI
                     NVSGSLRMQSYRLLSEMDSKKALLPERLLEYHRTLHATELSSLKQSVLLPDSVIESYQ
                     QLLKDWYEMQSYVAQGDKVNYASHIEDYVQRVDDFVFRLQEFAELKLKIATGVIAIAM
                     LLIIALAYIGVWYTRKKIIGPLRQLVKASWQIQNKDFDHVKLAVNEPNELGLLSSTFT
                     EMSNELLKLYTSLEDKVQDKTRRLLAVNRSLLVLYQCSQLLTAKPINKEVLNQVLKTV
                     FDNEHLLGIDLQVYGAEYWNVSIDNKPSLDWVSAEIAIENEKLGILSWKPSLVCPGER
                     LIQNVSEMIGRSLYVVQMQKQQQQLVLMEERAIIARELHDSLAQSLTFFKIQVSLLKL
                     AKTDEKRNEILTVFEKALNDAYSQLRELLTTFRLTIQEANLQQALEKILESLRPKTSA
                     QIRLSCKLPSHMFNAQQQVHVLQIVREAVINAIKHSQATEINVIAETNDDGEHCLTIQ
                     DNGVGLAAHTQPEGHYGLTIMQERAAELKAEFSIENVESGGVKVQVLLPSMISKR"
     gene            complement(13709..14527)
                     /locus_tag="PXD69_000614"
     CDS             complement(13709..14527)
                     /locus_tag="PXD69_000614"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HDL6282840.1"
                     /translation="MNYQAIAFDLDGTLLSSNATILESSKEAIKKVREKGIKVYFVTG
                     RHHTAVRPYYVELGLDTPVVCCNGTYVYDFKNEKVLSGNPLSAEIASKLVNDAQAQGI
                     HTAVYFEDAMTYESLNIHFTKFQKWVESCAPEVRPNVYQVENFQQEIDKGVTVWKVLI
                     SDPDLAKMQKFVEKLPPDQVSPEWSWVDRVDITSVGNSKGARLAEVLKTEGIDLQKVI
                     AFGDNFNDVSMLETVGLGIAMGNSEPDIQQKAKKTIGSNNEDSIANELKAQFNL"
     gene            complement(14615..15463)
                     /locus_tag="PXD69_000615"
     CDS             complement(14615..15463)
                     /locus_tag="PXD69_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL6282841.1"
                     /translation="MEKKALFRGFLLSTVALAVAACGNLSKVSDEGTTENPVFPKISE
                     SEFNHDGSQFGSWPNWENVRQIEKGMNKDQLYNLIGRPHFEEGLYGVREWDYAFNYRE
                     NGVHKICQFKILFDKNMNAQSFFWYPNGCNGNSSFALTGDFLFDFDKATLTTKGKEVV
                     DNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRRSNTVKARLVQQGVTAQIEAVG
                     YGKANQVKACDGETGQALKDCLRPNRRVEISANCGVMKQNEGGNVAGPNGPAPLYQTP
                     AYDGSK"
     gene            complement(15591..17312)
                     /gene="recJ"
                     /locus_tag="PXD69_000616"
     CDS             complement(15591..17312)
                     /gene="recJ"
                     /locus_tag="PXD69_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDL6282842.1"
                     /translation="MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNL
                     HRPQQLANIEQAVDLLLQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYL
                     IPDRFSQGYGLSVAVAEMVLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLP
                     PESLPNADALVNPNLAFCEFPSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAE
                     LLDLVALGTVADVVPLDQNNRILVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAAD
                     LGFAIAPRLNAAGRLENMSLGVELLICENMELARRLALDLDSLNQTRKEFEQEMKAEA
                     LSICANLPSLAQSEQAHGIVLYQADWHQGVIGILASRIKDQFNRPVIAFAQESEESEY
                     LKGSARSINGVHMRDLLEHIDMRHPDLIEKFGGHAMAAGLTIHQSKLDLFKQIFDQSI
                     NAIIEPEQLQGIIYTDGELNALEFTLANAEMIRQGGPWGQHFPEPSFEGEFSILQQKL
                     LAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPDLSIKKARLVYRLDINEFRGEKSLQLK
                     VEYLKYI"
     gene            complement(17397..18080)
                     /gene="dsbC"
                     /locus_tag="PXD69_000617"
     CDS             complement(17397..18080)
                     /gene="dsbC"
                     /locus_tag="PXD69_000617"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HDL6282843.1"
                     /translation="MKKNLITLGLMCLSTITFASDAKLKSQLEKIGATDVKISDSPLT
                     GFKMATSNEGVVYISQDGRYVIQGKVFELKNGKAIDITNQGLLAELNSYTNEMIVYPA
                     KNEKHVITVFMDITCHYCHLLHTKIKEYNDLGITIRYLAFPRGGMNTQTAKQMEAIWT
                     SADKVKALNDAEDGKLPTQIKTPDIVKKHYQLGIKFGVTGTPNMVTSEGELIGGYVEP
                     KELAKMLSE"
     gene            complement(18090..19619)
                     /gene="mepM"
                     /locus_tag="PXD69_000618"
     CDS             complement(18090..19619)
                     /gene="mepM"
                     /locus_tag="PXD69_000618"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HDL6282844.1"
                     /translation="MQHVILARDRKRHKKHFKIAVFLLAVFSLFVDIVLALKDQSSIN
                     NTSSQEDIIAIDKQEKYQSINTNLAENNTLHQEQHSSFINYVTDLLTQSALVIEHDDE
                     IVDDQTATSYEDELVGQDDEVEEGIETVENQVPGEKLPEEAEKALEDLLDVADQALRI
                     QNQFSYTVARGDKLKDVLEQSGLTASVAKNLIKQHSALAQLEPGQQFYWVLDNDGELE
                     YMNWLVSEKEERVYERKENGKFSFQRFEKKGEWKLDVVRGTIQNSFAVSLKAVGLSDR
                     QINQLAVGLQSQIATNKLKKGDRFAILIKREYIDGKVTDLGNVEGIHVISSKKSYYAI
                     QADNGRYYSRYGETLSGGFARHPLLFAARVTSSFNPKRRHPITGRISPHKGVDYGVPI
                     GTPIIAPSDGVVEHVAYQARGAGRYIRIKHGHITTVYMHLSKTLVKPGQSVKKGERIA
                     LSGNTGGSTGPHLHYEFHINGRPVNPITVKLPGSNSGMGNKERQAFLNKAKNVESRLK
                     M"
     gene            19844..20590
                     /gene="znuC"
                     /locus_tag="PXD69_000619"
     CDS             19844..20590
                     /gene="znuC"
                     /locus_tag="PXD69_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HDL6282845.1"
                     /translation="MVSLENIEVSFNGQKALQNINLSIYPNSITTIVGPNGGGKSTLL
                     KILLKLLSPNKGKVIHQKGLKIGYVPQKLHLEPSMPITVYRFLALKPHTTKEMINQAL
                     DLFSITHLTENSMQKLSGGELQRVLLARAILDRPQLLVLDEPMQGVDIIGQTELYQLL
                     NKTRDLLNCAILMVSHDLNIVMANTDEVLCINKHICCAGSPEVITHDPSFIHFFGDQF
                     ARNVAFYSHKHNHHHNLHGDICLGECSCEH"
     gene            20755..23568
                     /gene="sucA"
                     /locus_tag="PXD69_000620"
     CDS             20755..23568
                     /gene="sucA"
                     /locus_tag="PXD69_000620"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDL6282846.1"
                     /translation="MQYTHFDDWLASSALGGANQSYIEEIYEQYLENPANVDESWRNI
                     FDSFPKTPQVEQAHTPIRDYFRKLAREQQPQSVTIIDPEAGAKQVRLLQWINAHRFRG
                     YLEAKLDPINYYRWKTSSVPELDYKYHGFTDEDLNETFTVGRYVYDKDTMKLSELDKA
                     LKETYLGPIGLEFMHVQDIEQRNWLQAKMESVLNKPLFTKAEKLNLLSELTAADGLER
                     YLGAKFPGAKRFSLEGSDAFIPMMKEIIRHASRQGMTDVVLGMAHRGRLNMLVNVFGK
                     RPAELFDEFAGKHADESRTGDVKYHQGFSSNFAVDDKNVHLTLAFNPSHLEIVSPVVI
                     GSVRARQERMRDIEHEKVLAVTVHGDSAVAGQGVVQETLNMANVRGYKVGGTIRIVIN
                     NQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRD
                     IFIDLISYRRHGHNEADEPLATQPMMYSIIKKHPTPRKVYADRLITEGVLTNEQEIEM
                     LNLYRDALDNGECVVPEWREMDMAAVDWLQYLNYDWTALYESKFPEERFLTIAKRVCE
                     YPASLKAHSRVEKIYTDRKEMYEGKKLFDWGMAETMAYATLLDEGTHVRLSGEDAGRG
                     TFFHRHAVIHNQNDGTGYVPLTQLHANQGRFQVWDSVLSEEAVLAFEYGFATTDPKTL
                     TIWEAQFGDFANGAQIVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARVERY
                     LQLCAQQNIQVCVPSTPAQVYHMLRRQAIRKMRRPLVAITPKSLLRHPLAVSSLDELI
                     NGSFQNVIGELDNIDPKQVKRVVMCSGKVYYDLIEKRRENNQTDVAIIRIEQLYPFPL
                     EEMQQILEPYAHVKDFVWCQEEPLNQGAWYCSKHNFEASLPEDAKLTYAGRPASASPA
                     VGYPSLHAKQQKQLVEDALTIAE"
     gene            23671..24900
                     /gene="odhB"
                     /locus_tag="PXD69_000621"
     CDS             23671..24900
                     /gene="odhB"
                     /locus_tag="PXD69_000621"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDL6282847.1"
                     /translation="MTIEILTPDLPESVADATVATWHKKVGDNVKRDEILVEIETDKV
                     VLEVPASSDGILAEITQEQGATVVSKQSLGKLVVAKAGDISSATIEQKTESTPSDRKH
                     AAIENSHANADDQGPAIRRLLAEHDLQAADIQGSGVGGRITREDIEKEIAKRVQINQV
                     KGSATSQNTVSTVAFNSRSEKRVPMTRLRKRIAERLLEAKNTTAMLTTFNELDMQPIM
                     NLRKTYGEKFEKQHGVRLGFMSFYIKAVVEALKRYPEINASIDGDDVVYHNYFDISIA
                     VSTPRGLVTPVLRDCDKMSMADIEKKIKELAEKGRDGKLTVEDLTGGNFTITNGGVFG
                     SLMSTPIINPPQSAILGMHAIKDRPVAIDGQVVIRPMMYLALSYDHRLIDGKESVGFL
                     VAVKELLEDPTRLLLEI"
     gene            25193..26353
                     /gene="sucC"
                     /locus_tag="PXD69_000622"
     CDS             25193..26353
                     /gene="sucC"
                     /locus_tag="PXD69_000622"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDL6282848.1"
                     /translation="MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWA
                     IKCQVHAGGRGKAGGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETC
                     NIDRELYLGAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQG
                     RELAFKLGLKGDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSI
                     DSNALYRHPELKELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLYGGKPANFLDVGGGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIA
                     AVNEVGVNVPVIVRLEGTNAAQGREILANSGLSILAASSLKQAAELAVKSAN"
     gene            26362..27231
                     /gene="sucD"
                     /locus_tag="PXD69_000623"
     CDS             26362..27231
                     /gene="sucD"
                     /locus_tag="PXD69_000623"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDL6282849.1"
                     /translation="MSILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKG
                     GTTHLGLPVFNTVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPT
                     LDMLQVKQRLNQTGVRMIGPNCPGVITPDECKIGIMPGNIHKKGNIGIVSRSGTLTYE
                     AVKQTTDEGFGQSTCVGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGSAEEEA
                     AAFIKENVTKPVVSYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKILEDAGVTTVRS
                     LAEIGSALRKILG"
     gene            complement(27302..28747)
                     /locus_tag="PXD69_000624"
     CDS             complement(27302..28747)
                     /locus_tag="PXD69_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDL6282850.1"
                     /translation="MDSIILFFESVLTWIVNTIDGPLWDVTIILLLGAGLFFTLTTGF
                     VQLRLLPQSLREMWGGRSTEGKSLTPFQAFTTGLASRVGVGNIGGVATAIALGGPGAV
                     FWMWITALMGMSSAFAESSLAQLYKTKDPNGMFRGGPAYYITRGLKLPSLAIAFAVTL
                     IFTFGFAFNAVQSNSIVEATKNAWDWNPVYVGMTLVVITGLIISGGVKRIGKVSAQVV
                     PMMALFYLIIAVIILGMNIEKVPSIISLIIESAFDFSAAAGGTFGALVSKTMLMGIKR
                     GLFSNEAGMGSAPNSAATSDAKHPASQGLIQMLGVFVDTIVVCTCTAVIILMSNNYGG
                     ETLRGISLTQSALQFHLGEFGLHFLAFVILLFCFTSIIGNYAYAETNIRYIKNSPWFV
                     WGFRAIVLFFVYFGAVRDGGIVWAFADTVMASMAVINLVAILILAPIVWIILKDYLRQ
                     VKSGKEPVFRIEEHQDLIHKGVDPLIWKSKE"
     gene            complement(28852..29838)
                     /locus_tag="PXD69_000625"
     CDS             complement(28852..29838)
                     /locus_tag="PXD69_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HDL6282851.1"
                     /translation="MRLKATYWGMIVIGFLSLFALYQLYPMILFKVMEWQKNFNLQLS
                     ASLNELAENQSKAGITLVFISFLYGVFHAVGPGHGKFILSSYLSFEKTKLNQAMKITF
                     ASALVQGLVAISLVTVIVVIFTLSRQYFNLTLKWVERGSFGLMILFGIYWCYQVYRTV
                     NRARKPIIKSIRISQKKAGKLPLVTQKGHIHTENCSCRHKHLPTSNEMQQVRDWKAQL
                     MLVLSIGSRPCSGAILVLFLSYTLNLYAWGVISALAMAVGTGLTLSLFAYLVIIARNK
                     AVKVSQWYFSAQINRNIVWILKFTLGLALILFGMVLFHSSFIDAGTGVFFKR"
     gene            complement(29829..30467)
                     /locus_tag="PXD69_000626"
     CDS             complement(29829..30467)
                     /locus_tag="PXD69_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HDL6282852.1"
                     /translation="MKFIKTIITLIALYSMPVFSHPHSFVDLKTNVIVEGSMLKSFQM
                     EWMLDEIASSELIYEVKNSQDKEKTQQNITAEMVQTALQNHYFSTLYDSQNQPIKFTT
                     KPTATRFEIKNNRVIFYITFHLAKPHELKQSKVRFYTYEPSYYIAMEYNRPADVNTSN
                     ASCKATLVQPQVDSKLRLYASGLDKNQSLDMPENGDYSLGAQFAQKVEIICD"
     gene            complement(30528..30906)
                     /gene="rnpB"
                     /locus_tag="PXD69_000627"
     ncRNA           complement(30528..30906)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="PXD69_000627"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            31651..>32194
                     /locus_tag="PXD69_000628"
     CDS             31651..>32194
                     /locus_tag="PXD69_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282853.1"
                     /translation="MTTQITTAQINDLLKSHDIQGYANEWQGRRIYINLSAKNNESKG
                     DRNYQLYIDLATGELVSKLGKGLTTRAFDAAVKAFENAFNAKDTAENTAPVESKETEQ
                     ENKQETTKLVITKPTLKGSEKQIDSANEIINLFIAKIGDTSIPVTATQEQITQAQAMV
                     DNFFAMTNAGKWIEKFKGLND"
BASE COUNT         9893 a         6877 c         5748 g         9676 t
ORIGIN      
        1 ctctcaaaaa gcaatatagc attaataaaa acatcatttt tcataggaaa cttgatattt
       61 attaatcgtt tgtagtctct aataatattt atttacacaa aataaactgc aaagagcaag
      121 aaaatctgcc ttactgtgct tagttcctgt ttgtaggaaa ttgattttat gggaaaacgc
      181 gactatattc aatttattgt tcgcagcaaa agagccaaat tccgttcaga atttggctct
      241 atatttaaaa tataacttag caattaacct ttgtagttat atacgtgagc aactaagtct
      301 aatactttgt ttgagtagcc aacttcgtta tcgtaccaag atactaattt aacgaaagta
      361 tcagttaatg cgatacctgc tgctgcatca aatactgaag tttcagttgc accattgaag
      421 tctgttgaaa caactgcatc ttctgtgtag cctaatacgc ctttcatttc gttttctgaa
      481 gcacgtttga tttcagcaca gatttctgca taagttgctg gtttttctaa gtttacagtt
      541 aaatcaacaa cagaaacgtt agtggttgga acacggaaag ccataccggt taatttaccg
      601 tttaatgcag gtaatacctt acctactgct ttcgctgcac ctgttgatga aggaatgatg
      661 ttttgtgacg cgccacgacc accacgccag tctttcgctg atggaccatc tactgttttt
      721 tgcgttgcag tagttgcgtg aacagttgtc attaaacctt ctttgatacc gaatttttcg
      781 tgaataactt tcgctaatgg tgctaaacag ttagttgtac aagaagcgtt agacacgatg
      841 tcttgacctg cgtaagtatc aaagtttacg ccgtttacga acataggtgt tgcatcttta
      901 gacggaccgg ttaaaacaac tttcttcgca cctgcggtga tgtgtttgcg agcagtttca
      961 tcatctaaga ataaacctgt tgcttcaact gcgatatcaa caccgatctc attccatttt
     1021 aagttagccg ggtcacgctc agctgttacg cggatcgctt taccgttaac tactaattga
     1081 ccgtctttaa cttcaacagt accgtcaaaa cgaccgtgag ttgaatcata tttcagcata
     1141 taagccatat aatcaacatc gattaagtcg ttgataccta ccacttcgat gtcatcacgg
     1201 tgttgtgctg cacggaaaac gatacgaccg atacggccaa agccgttaat accaatttta
     1261 attgccatag atttttctac ctatattaaa gttaaacaaa atttgttctt tatgtactac
     1321 actaaagatg cttgaattat agcacatctt ttcactttcc tgacaagcca aaagaaccct
     1381 tccaatataa cagataaatt ttttgtgatc tatgtcaaat tttgaaattt ataacgattt
     1441 tcaggtcaaa aaaagctaca atgacttcgc tactatctta ggagaattgc tgatgattaa
     1501 acctattcac gccctgacag aacaacaagt tgatatttta atcaaccacg gtacggaacg
     1561 tccgtttacc ggaaaatttt tgaatgaaca tcgggtagga atttatcgtt gtgccagatg
     1621 ccataacgat ttatttcact cagatactaa atttgatgcc ggttgtggct ggccaagttt
     1681 ttaccaaacg atttcagaat cgtcactacg ttacttagat gattacagtt taggacgtca
     1741 tcgtatcgaa attcgttgtg ggaattgtga ttcgcatatg ggacacgttt ttccggacgg
     1801 cccaccacca acagggttgc gtttttgcct caactctgcg gcattgaatt ttaagtggga
     1861 agaaacaggc gaagagattg acggctaacg agtaataaac aagcggtcat tattagcgga
     1921 aaatttgcaa aaatttggcg aataatgacc gcttgtgcta tttaacttct agccttaagc
     1981 gagaatattt ttcgcaataa tatcgcccat ttctgaggta gaaagcggtt tgctgtcatc
     2041 agctaaatca gcggtacggt agccatcagc aagggctttt tggatcgctg tttcaatcgc
     2101 atcagcagca tcacctaagt taaagctata acgcaacatc attgcggctg ataaaatttg
     2161 cgcaatcgga ttcgcaatat ttttaccggc aatatccggt gctgaaccgc ctgccggttc
     2221 atataagccg aaaccttgct cattgaggct ggctgaaggc aacatgccca tagaacctgt
     2281 aatcattgca gcctcatcgg aaataatatc gccgaagatg tttgagcata ataaaatatc
     2341 gaacgattca ggtgctttga ttagctgcat tgtcgcatta tcaatataca tatgctcaag
     2401 cgtgacttct gggaactctt tagctacttc cgtgacggtt tcacgccata aaatcgagct
     2461 ttgtaacaca ttggctttat ccacagaggt tacgtgtttt ttacgtttca ttgcagattc
     2521 aaacgccaca cgggtaatac gctcgatttc atatttgtag tatacttcgg tgtcaaacgc
     2581 tctcgtttgc gcaccttcac catcacggcc tttcggctgt ccaaaataaa tcccgccggt
     2641 taattcacgc accaccacca tatcaaaacc tttagcagca atatcggcac gtaatgggca
     2701 gaatttttcc agcccttgat acaatgcagc agggcgtaaa ttacagaata gcgagaaatg
     2761 tttacgcagt ggtaatagcg aacctcgttc aggttgctca tcaggtagta aatgcgtcca
     2821 tttcgggcca cctaccgagc caaacaaaat cgcatctgcc tcttcacagc cttttaaggt
     2881 attttcgggt aacgctttac cttgagcatc aatcgctgct ccaccaatgt tatattgatt
     2941 aaaatttagt ttaaagccaa atttttgttg agtcgcttca agcactttga tagcttctgc
     3001 catcacttcc ggcccaatgc cgtcaccggc aagcactgca atgttgtaag tttgcatata
     3061 agatcctctt agtatattta atgtcgattc ggctacattc tgcctgaaaa tagctgtttt
     3121 taaaacgaat tttacgccaa cccgataaaa atagcgtaaa ataaaagcgt atttggagat
     3181 tttttgatga aattgaccgc ttgtaaactc gtttttctac tctatttgat gtttaacctc
     3241 accgcttgtg gcacagtact aagcttggtt gaacaggatt accgtgttta tgccggcgta
     3301 ataaaagatt tccaagtaat gcaagaaggc ggtatattcg cggtgcttgc ggtgatcgat
     3361 ttacccttga gtttcgtatt agatacttta atgttacccg ttacacttag ccaataataa
     3421 ccacattaaa acgcctcttt ttccgctatt tcagccacca caaacggcgt attttccgtt
     3481 ttatttttaa gcaaattttg ttctctaaag ttaatcggaa aatggcaggc aaactcgtgc
     3541 tgttttactt tcactaatgg cggtttgttg atacattttt tttgtgcaaa agggcaacga
     3601 gggcctaaac gacaaccaat cggcatttct tgtaacatcg ggactgagcc tcgtagcgta
     3661 tttaagctac ttttaaaggc taaaggctga gaaaagtccg gcgaactatt gagtaacact
     3721 cgagtatagg ggtggtaaga cgattcaaga atgctctctt tatccgcaat ttcaacggtt
     3781 tgtccacaat aaagcacatt gtaagaatca acccaatttt gaatgctacg catgtcatta
     3841 ctcaccagca agattgaggt tcccaaattc tgattcatac tggaaagcaa gcgataaacc
     3901 tgcaactgcg tggttgattc cataatatta gtcggctcat ctgccaccaa taatcggggc
     3961 tgatttgcca ccgccattgc aatcatcact ttctgagctt cgccttcggt aatatcgctt
     4021 gggtaacttt tcataatatc ttgatgatca cgaataccaa cacggtgtag tagctcgatt
     4081 gcttttttct ttttccaccc aaatcgttgc caccacttcc ctctaaattg aatggtttgc
     4141 atcagttgtt taccaatttg ctggcttggg tcaaggctag taagcggatc ttggaatacc
     4201 attgaaatat gatcgcctac caattttcgg cgttccgctg gcgaaagttt cagtaattca
     4261 atatcgtcaa agcgaaagcg atctgcactc acaatccatt catctttaat cataccgcaa
     4321 atcactttgg ctatgaggct ttttcccgaa ccagattctc ccaccaagcc acaaatttcg
     4381 ccctcatcaa cagtcaggtt gatgttatcc accattttta ctctgccttt tggcatatca
     4441 atttcaatac ttaaatggcg aatatcaagt aatgccatac tattccttaa tctgtaaaat
     4501 tttacttaaa aatgaccgct tgttatgtgt cagtatccta tttaaatact attctttacg
     4561 gtatttttca aaaatcacgc ttaagcgtgt accaagtatt gtaacggtaa aaatactaaa
     4621 aataattgct aagccaggta atatcaccgt ccaaggagct atataaatca gttccatgga
     4681 ttcacgaatc atcgctcccc attcaggggt cgggctttta gcccccagca taataaaact
     4741 taacgcacta atatctaata tggcgatcac aaaaatatgt gaaagtgctt taattgccac
     4801 gccggtaaga ttaggaataa tcacttctcg aattaaatac cagcagcttg caccgtctag
     4861 ctttaaggta atgatgtact cttttttgag ttgtttttcg gttgcttgat aaattttatg
     4921 gataaaatgc ggcaacatcg ctaagaaaat cgccaacatt gcattgacca aactcgcttc
     4981 cattaaggtt gcaatgatga tcgcaatcaa taaaatcggc ataaataaaa aggtatcgaa
     5041 caaatggcta atcaaccaaa atgaacgtcc ttttttcagc ccggcataaa tcccgatcat
     5101 accgccgata atcgcaatta ataaggtaat catcagtgcg gaaccaagcg tgtagtaaaa
     5161 accatacata atacggctta aaatatcccg tcctaaatcg tcagtgccta aaaaatggct
     5221 gatttgacct ttgtcgtccc aagagggagg cattaattct aaaccaacaa attgttcatt
     5281 ataattgtaa ggagcaagca aactaccaac aaaaatgaga gccagtaata gcaaaaaaag
     5341 ataaaaactg ccaagtgcaa gtttatcttg tcggaaatga aaccaaaatg ccttaaatgc
     5401 gttggtttct ctaaattgct cgggttcttt aataactgcc ataccaatcc tttttatctg
     5461 atgggtctaa catcacccgc acaaagcctg taaccatatc tactaataac acaaacaccc
     5521 cgattgcaac tactcccgct gaaatcgcat tatagtcttg aatagcaagg gcatttatca
     5581 gccaacgtcc aattcctccc cagctaaata tgttctcaat taacataccg aaggcaaaaa
     5641 ttaaaataaa ggtacgggca atcataggta ataatgcagg taaagtatta caaataatat
     5701 gcgttctcca aactctaaac ggtgtccagc cacgcgtttt cgctatttta atgtaatttt
     5761 gtttcattac ataacctgct ctagcttgag taatatgcat aacttctaat gtagctggca
     5821 cagccaagac taatgtcggc aaagctaagt gatgtaaagc actctgcatc atttttaatt
     5881 tataaggtac atcagataac caaatatcta atagcaaaaa gccggttacc atctgtttcg
     5941 gataaagcga atggatttct ccaattgctg acacttccca ctgattgaga gaagcgtaat
     6001 acattagcac taatgccagc caaaataccg gcacggctaa actcaatgaa cctagtgtat
     6061 ttaataatcg cccaaccata tttttttgct gagtagccgc aaaaaaacca agaggcaaac
     6121 caataattaa agaaacaatg agagccgata aacaaagcgt aattgtagcc gggaacacct
     6181 gtaaaatttg cgctgtgagc ggttctccat tactgaaact aataccaaaa tcaccattta
     6241 gcagagattt tacataataa caataagcct caaaccagcc taactcggct aagtggttta
     6301 atggatctcg taacagaata ttaaaactga taagtgacaa aaaaatcaac gtaatcaagg
     6361 ttagaaaaat ttttcgaaaa aagacaatca gcataattag tttccttttt tatgccccaa
     6421 gcccaaacgt aactctgata attttacctg gccgaaaggg gaaatatctg cctgtttcac
     6481 tccatctttt atgactaata cacgattagc attcattaaa gggagaatag gcaattgctc
     6541 ttctaataat ttttgtgcaa attcatacaa taaattagct gatgccggat catcacttag
     6601 acgggctgtt tgtaaccaaa aatcaaaatc ttcattgcac caatttgata aattagtcac
     6661 cgtttccgca gctttacaac tgagtaaggc ctccaaaaaa ctgttaggat caagattatt
     6721 tgctaaccaa ccacctaaaa tcaaatcata atccgcactt ttattagcaa gctgttgcac
     6781 caaataagct cgacttactg cgcgaatttc gacctctaaa ttttgcgtag ctaaatcagc
     6841 acgtatcatt tctgccattt ttaatgggtg ttgattataa actcgttttt catcaattac
     6901 ccacagtttt aagcgctgtt tttggtttac ttcttcggtc tctgttttgc tatctaaaga
     6961 ccgatttata atactgtcat gcatttcaac cgcttgctca cctgaatttt ggtgtggttg
     7021 ataagggtag cttccattat tttttttcga ccacaaagct gttggtaata ggttatccgc
     7081 tacttcacct gtaccataaa ataatttctc tgcaatacgt ttgcgattta tgccgcgtgc
     7141 aatacgttgg cgtaatgcca aatcctgccc aataccccgt tgcatattga atgctaaata
     7201 aaccaaatta gcacctttac tactaataag ctgccgatta tttaacactg ataattggct
     7261 aggttccgga aaagcaacca catcacattc attatttaaa aattttgcca tcctgccggt
     7321 cgcttctgtg gaaaaatcta cgaccatatt ttgaatatat gcttttttgc cccagtaatt
     7381 catatttggt tttaaacgca cataatcatt attttcataa ctttcaagtt gatatacgcc
     7441 tgttcctacc ggtaataaat ccagttgaac taagttatca tctgcattga gctgtaaagc
     7501 atattcttta gacagaataa ctgcatattg gctggctaaa tgcgccaaca atgctgaatc
     7561 aggacggact aattcaattt ttacaatgtc atttgacgga gaatgaatgc tggcaatttt
     7621 attcgctaaa tcaacacttt caaaataagg aaaataaatc tgccccgctg ttttttggta
     7681 aatatagctt tgtcgctggt ggtgtaatac actttcaggc tcacttttca cttcaggtaa
     7741 atcactttct ttaccaatca ttcgttttag cgaaaacacc acatcttctg cgtttaattt
     7801 acgactcgga gtaaaccatg gagttgtatg aaaagcgaca ttttttctta aacgtaatgt
     7861 aatcactaaa ccatcgtcgc tgattgaata actttcagct aaagcaggct ctagtcgatt
     7921 ttttttcgga ttaaactcaa ctaatttatc gtagatctgc tctgttacca cattcatatt
     7981 cgaactcaca tcggattttt gtgggttaaa agagaatccc gatgaagtag tgcaatacac
     8041 aaggctattt tcaagtagct cttgaggaat acttggcgct gcgtaagcgg tcgaatttag
     8101 ccctaaattt gcaaaacata ctgaaaaaat gaccgctagt ttattcatct ttactgtttc
     8161 cattttttgt taacccatat tgacgcaatt tgtttgccac cgcagtatgt gaaagtccga
     8221 gccgttgtgc taattttcgg gtactcggat attctgcata aaattggtgc aataattggg
     8281 cttcatactg gctcatcatt tcctcaagtg tcgcctcctc acgtacttca atcatcgcct
     8341 ccatatctct gggtaaatga agatctttta ccgctaaacg gtagctatgc gaaagtgtac
     8401 aagctcgata aagtgcgtta taaagctctc ttaagttgcc tcgccagtga taattctgca
     8461 atgcttgcaa aaaaacatta tcatactcta atttgctcac ccccaactga ttgctaattt
     8521 gggcgataaa gtaatcagct aataatggaa tatcctcttt tcgatctcgc aaaggtggta
     8581 aatttaaagt gagaacattt aaacgatgaa acagatcttc tcttactttg cctttttcaa
     8641 ctaataatga caaaggctgt aatgaagtac agatcaccct aacattgact tgaatctctt
     8701 gatcttcgcc cactcgacga aaagagccat catttaaaaa gcgcaataat ttggcttgca
     8761 tttccagcga taactcagaa atagagtcta ataatactgt accaccgtga gcatattcaa
     8821 agaaaccgac ggactcaacg ccattgccac gatgtccgaa catttccgat tctgcttctt
     8881 cagccggtaa accggcacag ttcacggcaa taaatttttg cattcgacga gatccaaaat
     8941 ggtgacaaga tttggcaaat aaatcttttc ctgttcccgt ctcaccttga atcaataatg
     9001 gtgcatcaag gttggcaaat ttttttgctt gttcaacaac ctcttttatc tttacagatt
     9061 gtccaattat ctgttcaaaa gattctggat ttacgaccat atagtctcct ataaatagca
     9121 aatttgtgca ttgtttaata cgcttaaagc ctgatattag ctactagagt taacaatgcg
     9181 agagggattg tgaggcgatc ataccgctat ttttctcttt tggaaacttt tgtttacaac
     9241 cctattcaga ttatttaagt tattaggttt acaatacagc atagatcttc taaacttatt
     9301 gcacttttta tgcctcaagc ggtcataaaa aacgaatttt ttactcgcta cccccattgg
     9361 taaagccgat gtttaaaggt aagcgttttg caaacaaagg agcaaatgat gtatttagaa
     9421 caaattaaag ctgagcttca agaagctgca gatgtattag acaaatttat gtctgatgaa
     9481 aaaaatatta aattaattca agatgccgcc atgctgattg caaatagttt caagcaaggt
     9541 ggtaaggtga tttcttgcgg taatggcggt tcgcactgtg atgcgatgca ctttgccgaa
     9601 gaattaacag gtcgttaccg tgaaaaccgt cccggatacc cggcaatcgc tatttccgat
     9661 gtcagccatt taagctgtgt aagtaatgac ttcggttatg aatatgtctt ctctcgttat
     9721 ctagaggccg ttgggcaaaa aggcgatgta ctctttggtc tatcaacctc tggtaactct
     9781 aaaaatgtgt taaatgcgat caaagttgcc aaagaaaaag gcatgaaagt aattgcaatg
     9841 accggcaaag atggcgggca aatggcagga ttagccgatg tggaaatccg agtacctcat
     9901 ttccgttacg cagaccgcat ccaagaaatt cacattaaag tgattcatat tttgatgatg
     9961 ttaattgaat ttgagatgga aaaagcctaa tctctataac aaaaaggcgt ttgcaccaaa
    10021 cgcctttttc tcatacttca tcaataacaa actcaaacca atcaatcaca tctttttcgt
    10081 gaataccgtt agcaatcagc attccggcat tttttacaga atcaggatct ttagagatta
    10141 aagggtgcca atcaaaaaga ggctttcctt cataaagtaa acgataagca caggtttttg
    10201 gcaaccagcc aaaatcaggt aagttctttt tagttaattt tgtacaatcc gactcaattt
    10261 taaaacggtt cgagtaattc atacaacggc ctgtattcac atctaataaa ttacaggcaa
    10321 ccgaggtata gtaaagccgt tcacgccgcc ctcttccctg aatatatttc cggtagcagc
    10381 acttaccaca accgtcacat aatgcttccc attcagcatc attcatttca agtagcgatt
    10441 tgttctgcca gaaatttgct tcaaagtgtt gttcaaactg cataaattaa cgtattacaa
    10501 ccgcagtacc agtcgctacc acgatgaaca ttcctttatc gccgcccatt gattgatact
    10561 ccatagaaac gccaaccacc gcatttgccc ccactttttg tgcctcctta gctaattcag
    10621 ctaatgcctc ttttcttgca ccgtttaatt tgctttcata agcacctgaa cgtccgccaa
    10681 taatatcggt gataccggct aagaaatcac ggataaaatt agccccagaa actacttcgc
    10741 caaatactaa ccctttgtat tctacaattt gtttaccctc tatcgtaggt gtagttgtaa
    10801 taatcattta ttctctcctg ctaattgctg ttttaattgc tctagtgcga ttgcacggtg
    10861 tgaaatcgct tttttctctt tggtttctaa ttcggcaaaa gtgcaagctt tcggtgggta
    10921 gaaaaacagg gaatcgtagc cgaaaccatt ttcacctctt tcttccgtca aaatttcacc
    10981 gaaacattca cccgacgcaa tataaggtgt tgggtcagtt tcgtgtttta aaaacacgat
    11041 acaactgaca aatttcgcca gacgattctc ttgcccttgc attttggcta gtaatttttg
    11101 gcgattatcg gcatcggttg cctgctctcc ggcataacgt gcagaatata gccccggttc
    11161 accaccaagt gccataaccg ataaacctga atcatcggca atcgccggta aacctgtcat
    11221 tttagcagca aatcgtgctt taatcagcgc attttcaaca aaagtcaaac cggtttcttc
    11281 cggtgattca atcccaaatt cactttgagc caccacctca aaaccaaatt gtgagagtac
    11341 atctgccatt tctttaactt tatctgcatt acttgttgca agtacaattt ttgtcttttc
    11401 catattgtcc ttatttgcaa aaatattcta aaaaatcacc gcttgttatt cgataccttt
    11461 ttggtaagac atcatcagca acgttcgcca tttatcctca cctttctcat cttttcccat
    11521 attagcaata ttcggaaatc ttccccattg ttcaaagccg tgttttctca ttagattttg
    11581 gctcactgta tttaattcaa acacatacgc catcaacgta tgaatattgt gattaagcat
    11641 ttcagcttgc ataaactcaa taatttttga gccatagcct tttcctttgg aatagcggtc
    11701 taaatagata ctgatttccg aagtatgtaa aaatgccggt ctttcataaa atggtgaaaa
    11761 actaaaccag ccagcaatgc ctttttcatc ttcgaccacc caaataggat attgggctgt
    11821 ttcaaggtga aaatcgaacc acttccgccg attttgcgta gttgccagtt ctaaatcggc
    11881 ggtaatttgg tgagtgggaa ttgcttgatt ataaattgcc aatattgtct caaaatccgc
    11941 ttctactgct tttcggaatt gcatttgtta tccttttatt cgttgccaat aatacgcaaa
    12001 aaattaatat tttattaccg cttgctaatc atactcggca ataaaacctg tacttttact
    12061 ccgccacttt ccacattttc aatcgaaaat tcggctttga gttcagccgc ccgttcttgc
    12121 ataatcgtca gtccataatg cccttctggt tgcgtatggg cagcaagccc tacgccatta
    12181 tcttgaatag tcaaacaatg ttcaccatca tcatttgttt cagcaatcac attaatttca
    12241 gtggcttgcg aatgcttaat agcattaatc acagcttctc gtacaatttg caatacgtga
    12301 acttgctgct gagcattaaa catatgcgaa ggtaatttgc aacttaagcg aatctgtgct
    12361 gaggttttcg gtcttaagct ttctaaaatt ttttctaacg cttgttgtaa attcgcttct
    12421 tgaatcgtta gcctaaacgt cgtcaacagc tcccttaatt ggctgtaagc atcatttaac
    12481 gctttttcaa atacagttaa aatttcatta cgcttttcat ctgttttagc aagcttaagc
    12541 aggctaacct gaattttgaa aaacgtaaga gattgggcta aggaatcgtg taactcacga
    12601 gcaataattg cacgctcctc catgagtacc aattgttgct gttgcttttg catctgcact
    12661 acataaaggc tacgaccaat catttccgac acattttgga tcaatcgttc accaggacaa
    12721 accagtgagg gtttccagct taagataccc aatttttcat tttctattgc aatttcagca
    12781 gaaacccaat ctaaacttgg tttattgtct attgatacat tccaatattc agccccatat
    12841 acttgtaaat caatccctag caaatgttca ttatcaaata ccgttttaag tacttgattt
    12901 aacacttctt tattaatcgg cttagcagtt aataattgag agcattgata taataccagt
    12961 aaagaacgat ttaccgccaa taaacgacgt gttttatcct gaactttatc ttctaatgaa
    13021 gtatataatt ttaataattc attagacatc tcagtaaaag tagaggaaag tagccctaat
    13081 tcattgggtt cattaaccgc taattttacg tggtcaaaat ctttattttg aatttgccaa
    13141 ctcgctttta ccaattgcct taaaggtcca ataatctttt ttcgagtata ccaaacgcca
    13201 atataagcaa gggcaataat cagtaacatt gcaatcgcaa tcacgcctgt tgcaatcttt
    13261 aattttaact cagcgaactc ttgtaagcgg aaaacaaaat catcaactct ctgcacataa
    13321 tcttcaatgt gcgaagcata attaacttta tctccctgag cgacataaga ttgcatttca
    13381 taccaatctt taagtaattg ttgatagctt tctatcacgc tatctggcaa taaaacactt
    13441 tgctttaatg aactaagctc tgtagcatgt agcgttcgat gatattccaa caatcgctca
    13501 ggtagcagcg ctttttttga atccatttct gataacaatc gataactttg catacgaagt
    13561 gagcctgaaa cattaatcag gctcgcatca gatttattgc tccacataat accaagtgag
    13621 attccactga taatcgaagc aaatccgatc ataattaaaa aatagagtcc tatccgccta
    13681 gcaatagagt attttgcttt tatcataatt aaagattaaa ttgagctttc aattcattag
    13741 caatactatc ttcattattt gaacctatag ttttcttcgc tttttgctga atatctggtt
    13801 ctgaatttcc cattgcaatg cctaatccaa cggtttctag catagaaaca tcattgaaat
    13861 tatcgccaaa ggcaatcacc ttttgtaaat caataccttc tgtttttaat acttccgcta
    13921 atcttgcccc tttgctgtta ccaacactgg taatatcaac cctatcaacc caagaccatt
    13981 ccgggcttac ttgatcaggc ggtaattttt caacaaattt ttgcattttg gcaagatctg
    14041 gatcgctaat aagcactttc catacggtta cacctttatc aatttcttgt tggaaatttt
    14101 ctacctgata aacattcgga cgaacttctg gtgcgcaaga ctcaacccat ttttggaatt
    14161 tagtgaagtg aatattcaaa gactcataag tcattgcatc ttcaaaataa accgcagtat
    14221 gaatcccttg agcttgtgca tcattaacta attttgaagc aatttctgct gataacggat
    14281 taccgcttaa tactttttca tttttaaaat catacacata agtgccattg caacacacaa
    14341 ctggcgtatc cagccctagt tctacataat aagggcgaac cgcagtatgg tgcctaccgg
    14401 taacaaagta gactttaatt cccttttctc ttaccttttt aatagcctct ttactggatt
    14461 ctaaaattgt tgcgttcgat gaaagtagtg ttccgtctaa atcaaatgca atagcttggt
    14521 agttcatagt attcccctat aaataaatag ataaaagaaa aggcaaccat ttggttgcct
    14581 taatattcta ctctaagtta gtcaaaacta gaaattattt actgccatca tatgctgggg
    14641 tttgataaag tggagccgga ccattaggac ctgcaacatt gccaccttca ttttgtttca
    14701 ttacaccaca atttgcagaa atttcaacac gacggttagg gcgtaaacaa tcttttaatg
    14761 cttgaccagt ttcaccatca caagctttta cttgattcgc tttaccataa cctaccgctt
    14821 caatttgtgc tgtaacgcct tgttgtacta aacgagcttt aactgtatta gaacgacgct
    14881 gtgataagtc taagttataa gcagcagagc ctaaacggtc tgtatagcct gctactttaa
    14941 cttgttgtgc tttagatgct tttaattgtt gagcaacatt atcaacaact tctttacctt
    15001 ttgtagttaa agtcgcttta tcgaaatcga ataagaaatc gccagttaaa gcaaatgatg
    15061 agtttccatt acatccattt ggataccaga agaaactttg tgcattcata tttttatcga
    15121 ataaaatttt aaattggcaa attttatgta cgccattttc acggtaattg aatgcatagt
    15181 cccattcacg aacaccatat aagccttctt caaaatgagg acgaccaatt agattatata
    15241 attgatcttt gttcatccct ttttcaattt gacgaacgtt ttcccagttt ggccatgaac
    15301 caaattgtga accatcgtgg ttaaattcag attctgagat tttcgggaat accgggtttt
    15361 cagttgttcc ttcatcactc actttactta agttaccaca agcagccact gctaatgcca
    15421 ctgtcgataa taaaaatcca cggaaaaggg cttttttttc cattttcata ttaagtttcc
    15481 ttatagtaat ctgtataaaa aaatagcttc acaacctatt aaagttgcat tcggacggat
    15541 tctacaatac aaatataatt aattctatta aatttacata aaataacatt tcaaatatat
    15601 ttaagatact ccacttttaa ttgcaaagat ttctctcctc gaaattcatt aatatccaac
    15661 ctataaacta atcttgcctt tttgatcgat aagtcaggaa acgcccttac atccacatta
    15721 aaccaaattg catcaaatag ttgccctttc tctgattgca acattaattt taaatgttta
    15781 cctgcgagta atttttgttg gagaatgcta aactcccctt caaaactagg ttctggaaaa
    15841 tgttgtcccc aaggcccacc ttgcctaatc atctcggcat tggctaaagt aaactctagt
    15901 gcatttaact caccatcggt ataaatgatg ccttgtaatt gctcaggctc gataattgca
    15961 ttaatagatt ggtcaaatat ctgtttaaat aaatctaatt ttgattgatg gatagtcaaa
    16021 ccagccgcca ttgcgtgtcc accaaatttt tcaatcaagt ctggatgtcg catatcgata
    16081 tgttccagta aatctcgcat atgtactccg ttgatcgagc gagcagaacc ttttagatat
    16141 tcactttcct cactttcttg tgcaaaagca atgacaggac ggttaaattg atctttaatg
    16201 cgagaagcta agatcccaat tacaccttgg tgccaatctg cttgatataa cactattccg
    16261 tgtgcctgtt cagactgcgc aagacttggc aaattcgcac aaatcgacag tgcttctgct
    16321 ttcatttctt gttcaaactc ttttcgggtt tgattaagag aatcaagatc aagcgcaagc
    16381 cggcgagcta attccatatt ttcacaaatt agtaactcaa cccctaaaga catattttct
    16441 aaccgaccag ctgcattcaa acgtggtgcg atagcaaaac ccaaatctgc tgcttgcaaa
    16501 gtagaaagat ctcgcttgcc cacctccgct aaagctttta tccctaaacg gcaatgccct
    16561 gaacggattc gctgtaaccc ttgatgcacc aatatccgat tattttgatc taacggcact
    16621 acatcagcca ctgtgcctaa agcgactaaa tccagtaatt cagcaaaatt tggctctggt
    16681 ttattttcaa ataaatgttg ttctctcata cgagaacgca atgccatcat tacatagaag
    16741 atcacgccta ccccggctaa agatttagac ggaaattcac aaaaagctaa attggggttt
    16801 accagtgcat ctgcattggg taggctctct ggcggtaaat gatgatcggt aaccaaaact
    16861 tgaatctgat ggctttttag cagagcaatg ccttcagtcg aagaaattcc attatctacc
    16921 gttaagacta aatccgcccc ttttgctaat accatttcag caaccgctac actcaatccg
    16981 tacccctgag aaaaacgatc cggaattaaa taatctacct tatcgaaacc caattggcgt
    17041 aacgcaataa gggcaagcga tgtactggtt gcaccatctg catcaaaatc acccacaata
    17101 atgatccggc ttttttcacg aaaggcttgt aatagcaagt caacggcttg ctcaatattg
    17161 gcaagttgct gtggtctatg caaattcttt aaattatgct ctagttcttg cgtattcttt
    17221 atgcctcgac tttgatagat tcgatttaat aacgggtttg tagagactat ttccgttgtt
    17281 aataatgggc gccttttaat tattttttcc acaatactct tctttaatga aacaacaagc
    17341 ggtcttcttt tgcaaaaatt ttacaaaaaa agaccgcttg tattcaagtt aatgaattac
    17401 tcacttaaca ttttcgctaa ttctttaggc tctacataac caccaatcaa ctcaccttct
    17461 gaagttacca tatttggggt acctgtcaca ccaaatttaa tccctaattg gtaatgtttt
    17521 ttcacaatat ccggcgtttt tatttgggtt ggtaatttac catcttcagc atcattcagt
    17581 gcttttactt tgtctgctga tgtccaaata gcttccattt gttttgctgt ttgggtattc
    17641 attccaccac gcgggaatgc caaatagcga atggtaatac ctaaatcatt atattctttg
    17701 attttagtat gtagtaaatg gcaataatgg caagtaatat ccataaacac cgtaatcaca
    17761 tgtttctcat ttttcgctgg atatacgatc atttcattag tgtatgaatt caattctgcc
    17821 aacaatcctt gattagtaat atcaatcgct ttaccatttt ttagctcaaa tactttacct
    17881 tgaattacat aacgaccgtc ttggctgata tatacaacac cttcatttga agtcgccatt
    17941 ttaaagcctg ttaatggaga atctgaaatt ttaacatctg tggctccaat tttttcaagc
    18001 tggcttttta gttttgcatc tgaagcaaac gtgatggttg ataaacacat taatcctaaa
    18061 gtgattagat tttttttcat tgagaatcct tacattttta atctactttc tacattcttc
    18121 gctttattta agaatgcttg acgttcttta ttacccatac ctgaatttga gccaggcaat
    18181 tttaccgtaa tcgggttgac cggtcgacca ttaatatgga attcatagtg taaatgaggc
    18241 ccggttgaac cgcctgtatt acccgataat gctatccgct cccctttttt aacactctgc
    18301 cctggtttta ccaacgtttt gctgaggtgc atataaacag tcgtaatatg tccgtgtttt
    18361 atccgaatat aacgtcctgc tccacgggct tgatatgcca catgctctac gacaccatca
    18421 cttggtgcga tgatcggagt acctattggc acgccatagt caaccccttt atgcggacta
    18481 attctccctg taatagggtg tctgcgtttg gggttgaaag aagaagttac tcttgctgca
    18541 aataataatg gatgacgagc aaatcctcca cttaatgttt caccatatcg actataatag
    18601 cgtccattat ctgcttgaat agcataataa ctttttttac tgctaattac atggattcct
    18661 tccacatttc ctaaatccgt tactttgccg tcaatatatt cccgcttaat cagaattgca
    18721 aacctatccc ctttttttaa tttattcgtc gcaatttgtg actgcaatcc aaccgctagc
    18781 tggttaattt ggcggtctga taagccaacg gcttttaagc taaccgcaaa actattctga
    18841 atagttcctc ttacaacatc taacttccat tccccttttt tctcaaatct ttgaaaagaa
    18901 aatttaccat tttcttttcg ctcataaacc cgttcctctt tttcggaaac cagccagttc
    18961 atatattcta attcaccgtc attatctaat acccaataaa attgttgacc cggttctaat
    19021 tgtgctaatg ccgaatgttg cttaattaaa tttttcgcaa cggatgcagt taagcctgat
    19081 tgctctaata catctttaag tttatcacct cgagctacgg tataactgaa ttggttttga
    19141 attcgtagtg cttgatcagc cacatcaagt aaatcttcta atgccttttc agcttcttct
    19201 gggagttttt ccccaggaac ttgattttca accgtttcaa tcccttcttc tacttcatcg
    19261 tcttgcccaa ctaattcatc ttcataagaa gtcgctgttt gatcatcaac aatttcgtcg
    19321 tcatgttcga ttactaatgc cgactgagtc agtaaatcag tcacataatt aataaaactg
    19381 gaatgttgct cctgatggag agtattattt tccgccaaat tagtgttgat actctgatat
    19441 ttttcctgtt tatcaatggc aataatatct tcctgtgaag atgtattatt gattgaggat
    19501 tgatctttta gtgcgagaac aatatcaaca aatagactaa ataccgctaa taagaaaacc
    19561 gcaatcttaa aatgtttttt atgtcgctta cgatctctcg ctaaaattac atgttgcaaa
    19621 atatatcccg ctatttttaa aatttactaa aatttacata tttttctgag tagactattt
    19681 taccaagaaa aaattcattt aatctattgt cacaacacga aaaatcagct aattttaact
    19741 caatacccct aattttttta tatcaatgaa aatccatcat cttaaaccga atctaaatac
    19801 cactacattt gaactattca aacagaattt atccgcgaca tcactggttt ctcttgagaa
    19861 tattgaagtg tctttcaatg gacaaaaagc attacaaaat attaatttat ctatttatcc
    19921 taactctatc acgacgatag tcgggccaaa tggtggagga aaatctaccc tgcttaaaat
    19981 tttgctaaaa ttacttagcc caaataaagg aaaggttatt catcaaaaag gactcaaaat
    20041 tggctatgta ccacaaaaat tgcatttaga accctcgatg cccattactg tttatcgatt
    20101 tcttgcgcta aaaccacata ctaccaaaga aatgattaac caagcactag atctgttttc
    20161 tattacccat ctcactgaaa atagtatgca aaaattatcg ggtggtgaac ttcaacgtgt
    20221 attgctggct cgggcaattt tagatcgtcc gcaactctta gtgttagatg aaccaatgca
    20281 aggcgttgat attataggcc aaaccgaact ctatcaatta cttaataaaa caagggatct
    20341 ccttaactgt gctattttaa tggtctcaca cgacttaaat attgtgatgg cgaatacaga
    20401 tgaagtgctt tgcatcaata aacatatttg ttgtgccgga agccccgaag tcattacaca
    20461 cgatccgagc tttatccatt tttttggcga ccaatttgca cgtaatgttg cattttattc
    20521 acataaacat aaccatcacc ataatttaca tggcgatatc tgccttggtg aatgtagttg
    20581 tgagcactga taggcgtcct ttttaccaaa tgtttaaaat ttgtaaaaat aatgctaaaa
    20641 ataaccgctt gcagcacaag atttatctaa aaatcagact tacttcacat tttatttgct
    20701 taaattggag tataataagg gcgtgatttc ataccacaaa caggtcaggt ctttatgcaa
    20761 tatacacatt ttgatgattg gcttgcatca tctgcattag gcggtgcaaa ccaatcttat
    20821 atagaagaaa tttatgaaca gtatctagaa aatccagcaa atgttgatga aagctggaga
    20881 aacatctttg attcatttcc taaaactccc caagttgaac aagctcacac ccctattcgt
    20941 gactatttcc gtaaattagc ccgtgaacag caacctcaat ccgtcactat tattgaccca
    21001 gaagcagggg cgaaacaagt tcgcttactg caatggatta acgctcaccg tttccgtggc
    21061 tatttagagg caaaactaga cccaattaac tattaccgtt ggaaaacctc cagcgtgcct
    21121 gaattggact acaaatatca cggcttcacc gatgaagatc tcaacgaaac ttttacggtc
    21181 ggtcgctatg tctatgataa agacacaatg aagctcagcg aactggataa agccctaaaa
    21241 gaaacttatt tagggcctat tggtttagaa tttatgcacg ttcaagatat tgaacaacgc
    21301 aactggcttc aagccaaaat ggaaagcgtg ctaaacaaac cgctgttcac caaagcagaa
    21361 aaactgaatt tattaagcga attgaccgct gccgatggtt tagagcgtta cttaggggca
    21421 aaattcccgg gggcaaaacg gttctcattg gaaggtagtg atgcctttat tccgatgatg
    21481 aaagaaatta tccgccacgc ttcccgtcaa ggtatgaccg atgtggtttt aggtatggca
    21541 caccgtggtc gtttgaatat gttagtgaac gtatttggta aacgcccggc agaattgttt
    21601 gatgaatttg ccggcaaaca cgctgatgaa agccgcacgg gcgatgtgaa ataccaccaa
    21661 ggtttctcct caaactttgc cgtagatgat aaaaacgttc accttaccct tgctttcaac
    21721 ccatcgcatt tagagattgt tagcccggtg gtaatcggct cagtgcgtgc aagacaagaa
    21781 cgtatgcgtg atatcgaaca cgaaaaggtg cttgcggtga ccgttcacgg tgactctgca
    21841 gtggcagggc aaggtgtagt gcaagaaacc ttaaatatgg caaatgttcg tggctataaa
    21901 gtaggaggca ctatccgtat tgtgatcaac aaccaaatcg gatttaccac ctctaaccca
    21961 aatgacaccc gctccaccga attttgtacc gacattgcca aaatgattca ggcaccgatt
    22021 attcacgtta atggtgatga tccggaagct gttgcctttg cagcgagaat ggctgtggaa
    22081 tatcgtacta aatttaaacg tgatattttt attgatttaa tctcttaccg tcgtcacggt
    22141 cataatgaag ccgatgagcc tttagcaact cagccaatga tgtatagcat catcaaaaaa
    22201 cacccgacac ctcgcaaagt ctatgcggat cgtttaatta ccgaaggtgt tttaaccaac
    22261 gagcaagaaa tcgagatgtt aaacctgtat cgtgatgcct tagacaacgg cgaatgcgtt
    22321 gtgccggaat ggcgtgaaat ggatatggca gcggtcgatt ggctacaata tctcaattac
    22381 gactggactg ccctatacga aagtaaattc cctgaagaac gattcttaac cattgccaaa
    22441 cgggtgtgcg aatatccggc ttcgcttaaa gctcattctc gggttgaaaa gatctacact
    22501 gatcgcaaag agatgtatga aggcaagaaa ttattcgact ggggtatggc tgaaacaatg
    22561 gcatacgcta ctttgttaga cgaaggcaca catgttcgcc tttcaggaga agatgccgga
    22621 cgtggcactt tcttccatcg ccatgcggta atccataacc aaaatgatgg aacaggctat
    22681 gtgccactta ctcaactgca cgccaatcaa gggcgtttcc aagtatggga ttccgtactc
    22741 tctgaagaag cggtactcgc ctttgaatat ggctttgcca ctaccgaccc gaaaacactg
    22801 accatttggg aagctcaatt tggagatttc gctaacggag ctcaaattgt tatcgaccaa
    22861 tttatcagct caggcgaaca aaaatggggc agaatgtgcg gtttagtgat gttattacca
    22921 cacggctatg aaggtcaagg gccggaacac tcctctgccc gagtggaacg ctatttacag
    22981 ctttgtgctc agcaaaatat tcaagtttgc gtgccatcaa caccggcaca ggtttaccat
    23041 atgttacgcc gtcaagcgat ccgcaaaatg cgtcgcccat tggttgcaat cacaccaaaa
    23101 tcattgctac gccacccact tgcggtgtca tctcttgatg aattgattaa cggttcattc
    23161 caaaatgtga ttggcgagct cgataatatc gatcctaaac aagtcaaacg tgtggtgatg
    23221 tgttcgggta aagtgtacta cgacttaatt gaaaaacgcc gtgaaaataa ccaaacggac
    23281 gttgccatta ttcgtatcga acagctctac ccgttcccac ttgaagaaat gcaacaaatt
    23341 ctcgagcctt acgctcacgt taaagacttt gtctggtgtc aagaagagcc actaaaccaa
    23401 ggtgcgtggt attgcagcaa gcacaatttt gaggcttctc tgccggaaga tgcaaaatta
    23461 acttacgcag gcagaccggc ttctgcttca ccggcggtgg gttatccatc gttacacgca
    23521 aaacaacaaa aacaacttgt tgaagatgct ttaacgatcg ctgaataata aaatgggcgt
    23581 atatacgccc tacaagcggt tcacttttaa ccaaatttta caatttacgc tgtcggagtt
    23641 ttaaaactct ctcgaaaaaa ggaataagtt atgaccattg aaattttaac ccccgattta
    23701 cccgaatctg ttgccgatgc gaccgttgcc acttggcata aaaaagtggg cgacaatgta
    23761 aaacgtgatg aaattttagt cgaaattgaa acagacaaag tcgttttaga agtaccggct
    23821 tcaagcgatg gtattcttgc agaaattacc caagaacaag gtgctactgt tgtatccaag
    23881 caatctctgg gtaaattagt agtagctaaa gccggtgata ttagctctgc aactattgag
    23941 caaaaaacag aatccacgcc atcagaccgc aaacacgcag caattgaaaa cagccacgcg
    24001 aacgctgatg atcaagggcc tgcgattcgc cgtttattag ccgaacacga cttacaagcc
    24061 gctgatattc aaggcagtgg tgtaggcggc agaatcaccc gcgaagatat tgaaaaagag
    24121 attgccaaac gagtgcaaat caaccaagta aaagggtctg caaccagcca aaacaccgtt
    24181 agcactgtag catttaacag ccgtagcgaa aaacgtgtgc cgatgacacg actccgcaaa
    24241 cgtattgccg aacgcttact agaggcaaaa aacaccactg caatgctcac tacttttaac
    24301 gagctggata tgcaaccaat tatgaattta cgcaaaacct atggcgaaaa attcgaaaaa
    24361 caacacggtg tgcgtttagg ctttatgtcg ttctacatta aagccgtggt tgaagcatta
    24421 aaacgctacc ctgaaatcaa tgcctccatt gatggcgatg atgtggttta tcataactat
    24481 ttcgacatca gcattgcggt ttctacccca cgaggcttag tcacacctgt gttgcgtgat
    24541 tgcgacaaaa tgagtatggc agatattgag aagaaaatta aagaacttgc cgaaaaaggg
    24601 cgtgacggca aattaaccgt tgaagactta accggcggta actttaccat caccaacggc
    24661 ggggtattcg gttcattaat gtccacccca attatcaacc cgccacaaag tgcgattttg
    24721 ggtatgcacg ctattaaaga ccgccctgtc gccattgacg gacaagtagt gatccgcccg
    24781 atgatgtacc tagccttaag ctatgaccac cgtttaattg acggtaaaga atctgtcggt
    24841 ttcttagtgg cagttaaaga gttattagaa gacccaaccc gtcttctttt ggaaatttaa
    24901 tcgaaaatat gaccgcttgt acttttagct acaagcggtc tgtttttaat aaaatttgac
    24961 aaaatccgat aaacgctcta tttgagttcc cttctgagcc acctgagcga ctttgaattt
    25021 gtaggaaaaa tttagtgttt gagcttacaa ggcaagcgag ttataaattt ttccgtcaag
    25081 caaattcaaa ctaagcgaag aaagtggcga agcagggtgt gctttctttt ggttactttt
    25141 ctttgcacaa gcaaagaaaa gtaacataaa aaaaaccaaa cgaggaaact ctatgaatct
    25201 acacgaatat caagcaaaac aaatattcaa acaatacggg cttcccgtaa gccaagggat
    25261 tgcttgcaaa acggcagagg aagccgttga ggcaattaaa caactacaag gtgaacaatg
    25321 ggcgataaag tgccaagttc acgctggtgg gcgtggcaaa gccggcgggg tgaaactggt
    25381 tcgcaatgaa gccgaagtgc gtgaatttgc cgataaatgg ctcggcaaac gcttagttac
    25441 cttccaaacc gatgctaatg ggcaaccggt taatacctta tatttagaag aaacctgcaa
    25501 tatcgaccgt gaattgtact taggtgcagt ggttgatcgc tccgctcaaa aagtgatttt
    25561 tatggcatca agtgccggtg gtatgaatat tgaagaagta gcggagaaaa cccctgaatt
    25621 aattcacaaa gcggtaattg acccactcac cggtgggcag ggttatcaag ggcgtgaatt
    25681 agcatttaaa ttaggcttga aaggtgatga agttaaacaa tttgcggata ttttcgtgaa
    25741 actggctaac ctatttgttg aaaaagattt agctttatta gaggtaaatc cacttgtcat
    25801 cactaaagaa gggcaactac tctgcttaga tgcaaaaatg tcgattgaca gcaatgctct
    25861 ctaccgccac ccagaactta aagagttgca agacccatcg caagatgacg aacgtgaagc
    25921 tgaagcggaa aaatggaatc tcaactacgt tgcactagat ggcaatatcg gctgtatggt
    25981 aaacggtgcg gggctggcaa tggggacgat ggatatcgtc aaactttatg gtggtaaacc
    26041 ggctaacttc ttagacgttg gcggtggtgc aaccaaagag cgtgtagcag cagcttttaa
    26101 attgatttta tctgatccga atgtgaaagc cgtgttagtc aatatttttg gtggtatcgt
    26161 ccgctgcgat ttgattgctg atggcgtcat tgctgctgta aacgaagtcg gcgtgaatgt
    26221 gcctgttatt gtgcgtttag aaggcactaa tgccgcacag gggcgtgaga ttttagccaa
    26281 tagcgggctg agtattctag cggcatcatc attaaaacaa gcggctgaat tagcggtaaa
    26341 atctgcaaat taggaggaaa aatgtcgatt ttaattgata aaaacacaaa agtaatttgc
    26401 caaggtttca ccggcggaca aggtactttc cacagcgaac aagcccttgc ttatggcaca
    26461 caattagtcg gcggagtttc gccgaataaa ggtggcacaa cccatttagg cttaccggtt
    26521 ttcaacaccg tacgcgaagc ggtagaagca accggtgcaa ctgcaaccgt tatctacgtt
    26581 ccggctcccg gctgtaaaga tgctatttta gaagccattg atgccggcat ccaactaatt
    26641 gtctgtatta ctgaaggcat tccaaccttg gatatgctac aagttaaaca acgtctaaac
    26701 caaaccggcg tgcgaatgat cggtccgaac tgcccgggtg tgattacccc tgatgagtgc
    26761 aaaatcggca ttatgccggg caatatccac aaaaaaggca atatcggtat tgtttctcgt
    26821 tcgggtactt taacctatga agcagttaaa caaacaactg acgaaggctt tggtcaatct
    26881 acttgtgtcg gtatcggtgg tgatccgatt ccgggatcta actttattga cattttaaaa
    26941 ctgttccaag acgatcctga aactgaagca attgtgatga ttggtgaaat cggcggctct
    27001 gccgaagaag aagcggcagc tttcatcaaa gaaaatgtca ccaagcctgt agtcagctat
    27061 attgccggtg tcaccgcacc aaaaggcaaa cgaatgggac acgccggtgc gattatcagc
    27121 ggcggcaaag gaaccgccga tgaaaaattc aaaatccttg aagatgccgg tgtgacaacc
    27181 gtcagaagtt tagccgaaat cggttcagct cttagaaaaa ttttaggcta aactaaaagt
    27241 tcaagcagtc atatttaccc atttttttgt aaatatgacc gcttgttttt ttgctattaa
    27301 attactcttt cgatttccaa attaatgggt caacaccttt atggataagg tcttgatgtt
    27361 cttcaattct aaacactggc tctttgccac ttttcacttg gcgaagatag tcttttaaaa
    27421 taatccagac aatcggagca agaattaaga tagccaccaa gttaattacc gccattgatg
    27481 ccatcactgt atcggcaaat gcccatacaa tccctccgtc tcttactgca ccgaagtaca
    27541 caaagaataa aacgatggca cggaatcccc acacaaacca cggactgttt ttaatgtagc
    27601 ggatattagt ttctgcataa gcatagttac cgataatgga tgtgaagcaa aacagtaaaa
    27661 tcacaaatgc taaaaagtgt aaaccaaatt cacctaaatg gaattgtaac gcactttgag
    27721 taagtgaaat acctcttaaa gtttcaccac catagttatt tgacataaga atgatcactg
    27781 cagtacaagt acagactaca attgtatcta caaatacgcc caacatttga attaagcctt
    27841 gacttgccgg gtgtttcgca tcagaagtcg ctgcagaatt tggtgcagat cccataccag
    27901 cttcgtttga gaataagcca cgtttaatcc ccattagcat agttttggat accaatgctc
    27961 caaacgttcc acctgcagca gcagaaaaat caaaggcgct ttcaataatt aaagagatta
    28021 tacttggcac tttttcaata ttcataccta aaataattac tgcaataatc aagtagaata
    28081 atgccatcat tggaacaact tgggcagaaa ctttaccaat acgcttgacc cctccagaaa
    28141 taattaaccc tgtaatcacc actaatgtca tgcctacgta gactgggttc caatcccacg
    28201 catttttggt tgcttccaca atagagttag attgcacagc attaaaagca aaaccaaagg
    28261 tgaagataag cgtcactgca aaagcaatag caagagaagg cagttttaaa ccacgagtga
    28321 tgtaataggc tggcccacca cgaaacattc cgtttggatc tttggtttta tacaactgag
    28381 ccagtgaaga ctcagcaaag gcggaactca ttcccattaa ggcggtaatc cacatccaga
    28441 ataccgcacc cggcccaccc aaagcgattg cagtagctac cccaccaata ttaccaaccc
    28501 caacacggct ggctaatcca gtagtaaagg cttggaacgg agttaatgat ttcccttccg
    28561 tagaacgtcc tccccacatt tcacgtaaac tttgcggaag aagacgcagc tggacaaaac
    28621 ctgttgtaag agtgaaaaat aaccctgcac cgagcaatag gataatcgtt acatcccaaa
    28681 gtggaccgtc gattgtgttc acaatccaag tcagtacact ctcaaaaaat agaataattg
    28741 aatccataaa gacctcttaa ttgaaaataa aacttccaca ttgtaaccga tttaatattt
    28801 ttaaaaagtt tttttaatac ttttaataaa aatttttaat aacttattaa tttagcgttt
    28861 gaaaaaaacg cctgtaccag catcaatgaa actactgtga aataatacca ttccaaatag
    28921 aattaatgcg agtccaagtg taaattttaa tatccaaacg atatttcgat taatttgagc
    28981 tgaaaaatac cattggctaa ccttaactgc cttatttctc gcaatgataa caagataagc
    29041 aaataagctt aaagtcagcc ctgttcctac tgccatagct aatgctgaaa taacccccca
    29101 agcatagaga ttgagcgtat aagaaagaaa taaaacaaga atagcgccag agcaaggtct
    29161 tgagccaata cttaatacca acatcagctg tgctttccaa tctctcactt gttgcatttc
    29221 atttgaagtc ggtaaatgtt tatgcctaca gctacaattt tcggtatgaa tatgcccttt
    29281 ctgcgtgaca agcggtaatt ttccagcttt tttttgcgaa atacgaatgg atttaatgat
    29341 aggctttcgc gctctgttca ccgttcgata cacctggtaa caccagtaaa tgccgaacaa
    29401 gatcatcaaa ccaaagctcc cccgctcaac ccattttagg gttaaattaa aatattggcg
    29461 agagagagta aaaatcacca caatcaccgt caccaatgaa attgccacta agccctgcac
    29521 caatgctgag gcaaaagtga ttttcatcgc ctgatttaat tttgtttttt caaaagaaag
    29581 ataactgctc agaataaatt ttccgtgacc aggcccaact gcgtgaaata ctccatataa
    29641 aaaactaata aatactaagg taataccggc tttactttga ttttcagcta attcattgag
    29701 cgaagcggaa agctgtaaat taaagttttt ttgccattcc atcactttaa acaatatcat
    29761 tggataaagc tgataaagag caaataggct caaaaatcct atcactatca ttccccaata
    29821 tgttgctttt aatcgcatat aatctccact ttttgagcaa attgggcacc aagagagtaa
    29881 tctccatttt caggcatatc cagtgattgg tttttatcca aaccggaagc atataagcgt
    29941 aacttactat ctacttgagg ttgcaccaat gttgctttac aacttgcatt actggtattg
    30001 acatcagcag ggcgattata ttccatcgca atataataac tcggttcata agtatagaat
    30061 ctcactttac tctgctttaa ttcgtgaggt ttagctaaat gaaaagtaat ataaaaaatc
    30121 actctgttat tcttgatttc aaagcgagtc gctgtgggct ttgtcgtaaa ttttatcggc
    30181 tgattttgac tatcatataa ggtgctaaaa taatgatttt gcaatgcggt ttgcaccatt
    30241 tctgcagtga tattctgctg agttttttct ttatcttggc tatttttcac ttcataaatt
    30301 aactcagaag aagcaatttc atctagcatc cattccattt ggaaagattt caacattgag
    30361 ccttccacaa taacattcgt tttcaaatca acaaatgaat gtgggtgaga aaaaactggc
    30421 attgaatata atgcaattaa cgtgataatc gtcttaataa atttcatatt tactttcact
    30481 ataaaataaa aaagcgaaca agttccccct gttcgcattt caagaattta gtgagttggt
    30541 cgataagccg agttctgtcg tggacaatca ttcctctaga cgtacattta cacatacgct
    30601 caagcaacct acccgaactc tcagcgggcc accgattgag ttcctatttg gtcttgctac
    30661 gagtggagtt taccctgctg tggaatgtta ccacccacac ggtgcgctct taccgcaccc
    30721 tttcaccctt accgacaaag ccggcggtct gctctctgtt gcactggtcg taggctcacg
    30781 ccccccggac gttatccggc actctgccct gtgtagctcg gactttcctc tcgtttactt
    30841 gtcccccagt ttacgttttc acgaatttag aggcttcaat aaaccagcga ttgcctaacc
    30901 aactcagcac tagagtataa tgctttcgca aaaaattgca aggaaataac cgcttgtagt
    30961 tattatggca aaataaaaaa ggattaagtt catttaaaaa cttaatcctc ttcgctttaa
    31021 ttcactcgta aaaattacgc acgtttgaag tctaagtgaa ctaattttgg tttctctatt
    31081 ttattacaat aatttcaaag ggttatttaa tcaatttcct ttctatttcc gaaactatat
    31141 acatttttcc gaaactcaaa ttttaatcag attataaaac aagctatttt ccttttttct
    31201 cattccaaaa ataccatcca aaacatctta ccgccaacca agtgctccac gcaaaaatag
    31261 gtctattttg cgcaatcaaa caatccctta accgcttatc tgcttccgct ctactgactt
    31321 ttccgtttac gcccacgatc gtgttgatga cagcacgaat taatattttc aggggcgtgt
    31381 accgcaatca attttaatta taaccaattg tttttaaatt aaattattga attacattta
    31441 aaatacacac aaaaacaccc acaataaagc aatacctcag cactcgaaga gcaagatcgt
    31501 ctttgaggga tagggggtaa aataaatttt ttaaaaattt gcaaaaaaat ttaaaaaaac
    31561 tcttgcaata aaattattat gcgcctataa ttaggcgcat aaagcaaggc tagggagcca
    31621 gctaataacc atcagccaaa gggggctaaa atgacaactc aaattacaac cgcacaaatc
    31681 aacgacttat taaaatctca cgatatccaa ggctacgcca acgaatggca aggtcgccgc
    31741 atttacatta acctttcagc aaaaaataac gaaagcaaag gtgatcggaa ttaccagttg
    31801 tacattgacc tagccacagg cgagttagtg agcaaacttg gcaaaggatt aacaaccaga
    31861 gcgtttgatg ctgccgtaaa agcttttgaa aacgctttta atgctaaaga caccgctgaa
    31921 aatacagcgc cggtagaaag caaagaaaca gagcaagaga acaaacaaga aacaactaag
    31981 cttgtaatca caaaaccaac attaaaaggc tctgaaaaac aaattgattc ggcaaacgaa
    32041 atcatcaatc tttttattgc gaagattggt gatacctcta tcccagtaac agcaacgcaa
    32101 gaacaaatta ctcaagctca agcaatggta gataattttt ttgcaatgac aaacgctgga
    32161 aagtggatcg aaaaatttaa aggtctaaat gata
//
LOCUS       DANLXO010000016        30132 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.016, whole genome shotgun sequence.
ACCESSION   DANLXO010000016 DANLXO010000000
VERSION     DANLXO010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 30132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30132
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.016"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            15..518
                     /locus_tag="PXD69_000629"
     CDS             15..518
                     /locus_tag="PXD69_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HDL6282854.1"
                     /translation="MNQSYFNLLGNITWLWMNSSLHKEWSCELLARNVIPAIENEQYM
                     LLIDNGIPIAYCSWADLNLETEVKYIKDINSLTPEEWQSGDRRWIIDWVAPFGHSQLL
                     YKKMCQKYPDMIVRSIRFYPKQKELGKIAYFKGGKLDKKTAKKRFDTYQEELATALKN
                     EFNFIKK"
     gene            534..3395
                     /locus_tag="PXD69_000630"
     CDS             534..3395
                     /locus_tag="PXD69_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX family hemolysin"
                     /protein_id="HDL6282855.1"
                     /translation="MGTRLTTLSNGLKNTLTATKSGLHKAGQSLTQAGSSLKTGAKKI
                     ILYIPQNYQYDTEQGNGLQDLVKAAEELGIEVQREERNNIATAQTSLGTIQTAIGLTE
                     RGIVLSAPQIDKLLQKTKAGQALGSAESIVQNANKAKTVLSGIQSILGSVLAGMDLDE
                     ALQNNSNQHALAKAGLELTNSLIENIANSVKTLDEFGEQISQFGSKLQNIKGLGTLGD
                     KLKNIGGLDKAGLGLDVISGLLSGATAALVLADKNASTAKKVGAGFELANQVVGNITK
                     AVSSYILAQRVAAGLSSTGPVAALIASTVSLAISPLAFAGIADKFNHAKSLESYAERF
                     KKLGYDGDNLLAEYQRGTGTIDASVTAINTALAAIAGGVSAAAAGSVIASPIALLVSG
                     ITGVISTILQYSKQAMFEHVANKIHNKIVEWEKNNHGKNYFENGYDARYLANLQDNMK
                     FLLNLNKELQAERVIAITQQQWDNNIGDLAGISRLGEKVLSGKAYVDAFEEGKHIKAD
                     KLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV
                     DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGT
                     TEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHTALV
                     GNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVDT
                     IDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIIT
                     DSDGNDKLSFSDSNLKDLTFEKVKHNLVITNSKKEKVTIQNWFREADFAKEVPNYKAT
                     KDEKIEEIIGQNGERITSKQVDDLIAKGNGKITQDELSKVVDNYELLKHSKNVTNSLD
                     KLISSVSAFTSSNDSRNVLVAPTSMLDQSLSSLQFARAA"
     gene            3470..5596
                     /locus_tag="PXD69_000631"
     CDS             3470..5596
                     /locus_tag="PXD69_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_063101322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HDL6282856.1"
                     /translation="MEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSL
                     TAWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNL
                     EQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLI
                     VSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFS
                     HSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLD
                     LLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDEKFARSADNQAFL
                     VESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVI
                     NLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLN
                     SPTEQYQGKLSLPEIKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSG
                     KSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIAL
                     SDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNN
                     PKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEI
                     VEQGKHHELLQNSNGLYSYLHQLQLN"
     gene            5608..7044
                     /locus_tag="PXD69_000632"
     CDS             5608..7044
                     /locus_tag="PXD69_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_140441352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HDL6282857.1"
                     /translation="MKIWLSGIYEFFLRYKNIWAEVWKIRKELDHPNRKKDESEFLPA
                     HLELIETPVSKKPRLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPI
                     ENAIVQEIFVKDGQFVEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAI
                     EKESLPVIDLSRTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTI
                     FAYVRKYEGATRIEQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNE
                     LENDLLNVKEELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVS
                     GTVQQLKIHTIGGVVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETF
                     PYTRYGYLTGRIKHISPDAIEQPNVGLVFNATIAIDRKNLTSPDGRKIDLSSGMTITA
                     EIKTGERSVMSYLLSPLEESVTESLRER"
     gene            7285..8283
                     /locus_tag="PXD69_000633"
                     /pseudo
     CDS             7285..8283
                     /locus_tag="PXD69_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250818.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            8300..9043
                     /locus_tag="PXD69_000634"
     CDS             8300..9043
                     /locus_tag="PXD69_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6282858.1"
                     /translation="MKQKYIYGLAGLLLLLLGWQLGTALLSQRLPMASMLAPAKTWES
                     FTWLISSGEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRM
                     ISPLSWMPIIVMLLGVGDLPIYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSAT
                     RKELLCKIVVPAITGHVLTGLRVAVGIAWVVLVPCEMLGVNQGLGYFILDTRDRLAYS
                     ELMAVIIIIGLIGWALDSLIRLALAKGGR"
     gene            9198..10256
                     /locus_tag="PXD69_000635"
     CDS             9198..10256
                     /locus_tag="PXD69_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDL6282859.1"
                     /translation="MSVLSSSFIQWLQQNAENLDQSNERADLLIPQIAALGLYKIGVP
                     ETLGGSGGTLVDAIKAVTELGNHSLAAAFVSWGHRTFIEHIIASKNPIPRQSYLADLL
                     NGNLTAGTGLSNAMKFLSGIEELNVNIREENGKRYLNGRLPWVTNLRSYRFVASFVAG
                     FQDERKPLVIAIPSTAKGLTRTKELEFIALQGTNTTSLVFENVELQDEWILADDAPEF
                     LAATRPAFLGLQFGLPFGLVERSLAEIEKSLPFRAILASEWQAQVDALNDIKTRLFNG
                     LNEEGYFVRNPKELFQARIDIVNVVAQTILLELQASGGRGYLKNDTSGFSRRWKEAAF
                     LPVVTPSAVQLRMVLANS"
     gene            complement(10377..10919)
                     /locus_tag="PXD69_000636"
     CDS             complement(10377..10919)
                     /locus_tag="PXD69_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL6282860.1"
                     /translation="MSQFQIHTIESAPETAQEALKAVQQANGFIPNLIGVLANAPTAL
                     ETYRTVGGINSRNSLTAEEREVVQITAAVVNGCGFCVAGHTKIALKALKMPEEVVNAL
                     RATARIDDNKLDTLARFTLAVMLQKAKLTEAQLNEFFAAGYNQQNAIDVILGVSLATL
                     CNYVNNIAEIPINPELQPFA"
     gene            complement(11071..12582)
                     /gene="glpK"
                     /locus_tag="PXD69_000637"
     CDS             complement(11071..12582)
                     /gene="glpK"
                     /locus_tag="PXD69_000637"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDL6282861.1"
                     /translation="MEKQYIIALDQGTTSSRAVLLDKNANVVEVAQREFTQIYPQAGW
                     VEHNPMEIWSSQSSTLNEVVAKAGIKPDSIAAIGITNQRETTIVWEKETGKPVYNAIV
                     WQCRRTSDITDKLKADGHEEYIRKTTGLVVDPYFSGTKVKWILDNVEGAREKAERGEL
                     LFGTVDTWLVWKLTQGRVHVTDYTNASRTMLFNIHTKQWDDKMLELLNIPRSMLPEVK
                     NSSEVYGQTNIGGQGGVRIPVAGIAGDQQAALYGHLCVKEGQAKNTYGTGCFMLMHTG
                     NTAIQSENGLLTTIACNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAT
                     KEDDSNGVYVVPAFTGLGAPYWDPYARGSIFGLTRGANRNHIVRATLESIAYQTRDVL
                     EAMQSDSKAKLQALRVDGGATANNFLMQFQADILDTKVERPKVKEVTALGAAYLAGIA
                     VGFWKDLEELKDKAEIERTFTPDGDQEKRAKRYKGWKKAVRRSLEWAKEDAEE"
     gene            complement(12586..13371)
                     /locus_tag="PXD69_000638"
     CDS             complement(12586..13371)
                     /locus_tag="PXD69_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HDL6282862.1"
                     /translation="MSKSLRNACIGEFIGTGFILFFGAGCVAAAQVAGANFGLWEISI
                     VWGLGVSMAIYISAGISGAHLNPAVTIALAAFYGFEKHKILPYVIAQVAGAFCSVALI
                     YFMYSDLFTAAEAAQGITRGETVGFAGVFSTYPNPNITLVTAFIVEFVITVVLMSTIL
                     AIGDDKNGLPNKALAALLIGLLIAVIGGATGPLTGFAMNPARDFGPKLFAYLAGWGEI
                     ALTGGKEIPYFIIPIVAPICGALFGAWGYKNLIHNNLPANTQE"
     gene            13584..13943
                     /locus_tag="PXD69_000639"
     CDS             13584..13943
                     /locus_tag="PXD69_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HDL6282863.1"
                     /translation="MISIGAVLGAMCRWQLAVWLNPILSQFAFGTLAANWLGCLLIGI
                     AMGFNLGESQRLLFISGFLGSFTTFSSFSLELTEKLLAEKWGQFVTVLSLHLIGGLLL
                     TLIGVMLARAVTSGRFC"
     gene            complement(13991..15313)
                     /locus_tag="PXD69_000640"
     CDS             complement(13991..15313)
                     /locus_tag="PXD69_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL6282864.1"
                     /translation="MSAMFIIQFAIVLLCILVGARVGGIGLGVFGGLGLAILSFGFGL
                     KPAGLPIDVMFMIMAVVSAAAAMQAAGGLDYMIKIATRILRKNPKYITFIAPLVTWTF
                     TVLAGTGHVAYSVLPVIAEVSRHNGIRPERPLSMAVIASQFAIVASPIAAAVVAVVAF
                     LEPQGVTLGNVLSVTIPATLLGLGLACVFVNKMGKELKDDPNYQRLLQDPEYVKENHI
                     TTNPTELPLKPTAKLSVGLFLFGALLVVLMGAIPALRPVFDGKPMGMAHTIEIVMLSI
                     GALIIFFCKPDGNEITKGSVFHAGMRAVIAIFGIAWLGDTLMQGHMDEVKSMVSGLVE
                     TAPWAFAFALFVLSVLVNSQGATVATLFPVAIAIGIPAPVLIGVFVAVNGYFFIPNYG
                     PIIASIDFDTTGTTRIGKYIFNHSFMLPGLLSMIFSIGFGLLLSNILL"
     gene            15462..16286
                     /gene="dapF"
                     /locus_tag="PXD69_000641"
     CDS             15462..16286
                     /gene="dapF"
                     /locus_tag="PXD69_000641"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDL6282865.1"
                     /translation="MQFSKMHGLGNDFMVVDGVTQNVYLTEEMIRTLSDRHRGIGFDQ
                     LLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDIHVSTAKG
                     KMVLSLQEDGKVRVNMGEPIWEPSQVPFTANKFEKNYILRTELQTVLCGVVSMGNPHC
                     VLQVDDVKTAPVNELGPLLESHERFPERANISFMQVVNRNHVKLRVYERGAGETQACG
                     SGACGTVAVGIMQGLLDNKVQVDLPGGTLIIEWQGVGHPLYMTGDATHIYDGFIKL"
     gene            complement(16457..16999)
                     /locus_tag="PXD69_000642"
     CDS             complement(16457..16999)
                     /locus_tag="PXD69_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDL6282866.1"
                     /translation="MAQVYIVHGYTANADKHWFPWLEQELAKCGVSCERLNMPDSAKP
                     SLDGWLNHLAQNVELTDQTVFVGHSLGCIAILNFLAKNYAKIKGAVFVSGFYQPVENL
                     PELSAFTNYYAILPSVSSFPSYVVSALDDKVVNHQYSDALAQHLHADYIRLNQGGHFL
                     DREGVTELPVVLELVKKLLE"
     gene            17123..17446
                     /locus_tag="PXD69_000643"
     CDS             17123..17446
                     /locus_tag="PXD69_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDL6282867.1"
                     /translation="MNVWILLAISICLEIAATNLLKLSNGFTKAIPTIGSLALYGLSF
                     YFLSIIFRTLPVGIVYAIWSGVGIVLTALVAYFAFGQKIDLAGLIGISLIIAGVLVIN
                     LFSKV"
     gene            complement(17509..18954)
                     /gene="xylB"
                     /locus_tag="PXD69_000644"
     CDS             complement(17509..18954)
                     /gene="xylB"
                     /locus_tag="PXD69_000644"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HDL6282868.1"
                     /translation="MYIGIDLGTSGVKVVLLDENQHIIAITQKSLPIFRPHPLWSEQN
                     PQDWWNATNEAMLELSATQDLQAVKAIGLTGQMHGATLLDNADNVLSPAILWNDGRSF
                     MECEELEQLVPNSREITGNLMMPGFTAPKLRWVDKHQPDIAEKVSKVLLPKDYLRLLM
                     SGEYASDMSDASGTMWLDVGKRNWNKSLLNACGLDIENMPKLFEGNQITGYLRPTLAE
                     QWKMKSVPIVAGGGDNAAGAIGIGLYQTGQAMLSLGTSGVYFVVSDKFQANPQKAVHS
                     FCHALPDRWHLMSVILSAASAVDWAVKSLGLKDVSTLFQQVEASQTASDAIFLPYLSG
                     ERTPHNDPYAKGVFWGLSHNDNQITMAKAVIEGVSFALAEGIEVLHETGVVADNIALI
                     GGGAKSVYWRQLLADISGKTFEYRTSGDVGPALGAAKLAQIALNPNQDIATFCQPLPL
                     EQVYQPTPARYAEYQQKRQKFTELYRRLKGL"
     gene            complement(19107..20426)
                     /gene="xylA"
                     /locus_tag="PXD69_000645"
     CDS             complement(19107..20426)
                     /gene="xylA"
                     /locus_tag="PXD69_000645"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HDL6282869.1"
                     /translation="MSNYFDKISKVQYEGANSTNPFAFKHYNPDEVVLGKTMAEHLRL
                     AVCYWHTFCWTGNDMFGVGSLDRSWQKTGDLLQGAKQKAEIAFEFFQKLGIPYYCFHD
                     VDVAPEGNNFKEYQHNFNTIVDILEQKQAETGVKLLWGTANCFTNPRYMSGASTNPNP
                     EVFAWAAAQVFTAMNATKRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVE
                     HKHKIGFNGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAG
                     HTFQHEIATATALDIFGSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTG
                     GFNFDAKIRRQSTDPYDLFHAHIGAIDVLALSLKRAAKMLEDQALQKVVDNRYAGWNQ
                     DLGLQILNGKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNSYIYR"
     gene            20668..21669
                     /gene="xylF"
                     /locus_tag="PXD69_000646"
     CDS             20668..21669
                     /gene="xylF"
                     /locus_tag="PXD69_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005576719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6282870.1"
                     /translation="MKLKSKLLAIATATLMVLSNASVAKDLKIGMSIDDLRLERWQKD
                     RDIFVNKAESLGAKVFVQSANGDATAQISQIENMLNKDIDVLVIIPFNGEVLSNVIAE
                     AKKEGVKVLAYDRLINNADVDFYVSFDNEKVGELQAKSIIGQKPEGNYFLMGGSPVDN
                     NAKLFRKGQMKVLQPLIDSGKIKVVGDQWVDSWLAEKALQIMENALTANKNNIDAVVA
                     SNDATAGGAIQALSAQGLSSKVAISGQDADLAAIKRIIAGTQTMTVYKPITNLADKAA
                     EIAVALGKDEKVEMNAQLNNGMKEVPAYLLEPVVVTKENIDDTVIKDGFHTKDAVYK"
     gene            21736..23250
                     /gene="xylG"
                     /locus_tag="PXD69_000647"
     CDS             21736..23250
                     /gene="xylG"
                     /locus_tag="PXD69_000647"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HDL6282871.1"
                     /translation="MAKLLEMKNITKKFGEVVALNNISISLETGEILSLCGENGSGKS
                     TLMKVLCGIYPAGDYEGEIYFSGEKLIARNIKDTEEKGISIIHQELTLVKNMSILENM
                     FLGNEITKSGITDDNEMYLRCKTLLEQVQLDIDPNTKVGELGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEKETEILLSLIKDLQAHNIACVYISHKLNEVKAISDKICVIRDG
                     EHIGTRSAEGMSEDDIITMMVGREITSLYPHEPHNIGEEVLRVENLTAWHPTNTHIKR
                     VDNANFVLRQGEILGIAGLVGSGRTEMAQCIFGSYQGKYQGDIFLHKQPIKIKNCAQA
                     IENHIVMVPEDRKKHGIIPIMGVGKNITLSSLPQFCFGKKVINEPLEETIINQSIAKL
                     KVKTSSPELAIGRLSGGNQQKAILAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ
                     LAKEGMAIIVISSELPEVLGISDRVLVMHQGKIKADLINQDLTQEKVMEAALKE"
     gene            23254..24381
                     /locus_tag="PXD69_000648"
     CDS             23254..24381
                     /locus_tag="PXD69_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDL6282872.1"
                     /translation="MNKLKSINLQVYIMLIAIVVIMSFFSIATDGAYLSARNISNLLR
                     QTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFAAISNVWWGWPLSLTIIVTLILG
                     VMLGAWSGWWVAYQKVPSFIVTLAGMLAFRGVLVGLTNGTTVSPISNEMTTIGQGYLP
                     DMVGMILGTIGIFCFIVWGSYQRKARQKLNLTVPSMSKDTLKYGLVAIIVLGAIYLLN
                     DYRGVPFPVLVLVILAIAGTFLARKTAFGRHIYAIGGNIDAARLSGISVEKVKLAIFA
                     LNGLLVAIAGLILSSRLGAGAPSAGQNAELDAIAACVIGGASLAGGIGSIYGVVIGAF
                     IIALLDNGMSMLDVPTFWQYIVKGGILLLAVWVDTISKKKA"
     gene            complement(24397..24927)
                     /locus_tag="PXD69_000649"
     CDS             complement(24397..24927)
                     /locus_tag="PXD69_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6282873.1"
                     /translation="MSENSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKK
                     VGVGGEILEFALSNLPQEIQTEIRSRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREI
                     ADARMALVAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLVELVAVANAKKTAKRTIV
                     PIFSPIMPDFPLDSRD"
     gene            complement(24943..25206)
                     /locus_tag="PXD69_000650"
     CDS             complement(24943..25206)
                     /locus_tag="PXD69_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6282874.1"
                     /translation="MSTLEDIKKTAKDWHRADIIAALHKAGWSLRQLSLKHGYSQSST
                     LKNAVDRPWLKGERIIAEAIGISPEEIWPERYAQRNHKKFADR"
     gene            25390..25872
                     /locus_tag="PXD69_000651"
     CDS             25390..25872
                     /locus_tag="PXD69_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6282875.1"
                     /translation="MKIECKKVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAW
                     EADTREPPISKLMALSQILNVEPCYLLTGERHSQSLNVTREPQPVYATKPQTEEGEVV
                     VIKAKLQEAIETLEEVLEITQREMKPAGKAQMVWAFYELLTQEKSEKEKMVGLLKLVA
                     "
     gene            25884..26135
                     /locus_tag="PXD69_000652"
     CDS             25884..26135
                     /locus_tag="PXD69_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282876.1"
                     /translation="MDKQAILKLFRDNSTAGNSQPSQEPIQVFNNSNVIIQNGDNATV
                     IAGCTVDNNTNLTCADKQRVHDLIHSLEQRNRASRDEGA"
     gene            complement(26425..28290)
                     /locus_tag="PXD69_000653"
     CDS             complement(26425..28290)
                     /locus_tag="PXD69_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDL6282877.1"
                     /translation="MQSLLSFVPDFLKQELFWVMALLVFAIWQFIQNKLRMDVVALIV
                     MLFFSLTNILSVKEVLAGLSDPNVVLIALLFIVGEGLVRTGVANQVSDWLMRVSGASE
                     TKVLVLLMLCIAGLGSFMSSTGIVAIFIPVVLAICSGMGISPRRLMMPLSVAGLISGM
                     MTLIATPPNLVAHSELVKSGFEGFNFFSFTPIGLIILVMGIGYMLIARRWLDNGEQSN
                     THSQAQKFSMSQLIEEYQLKERAKMVLVEADSDCVGKSIGQLNLRIEQGLNIIAIQRT
                     KRFRKITVSASVNEIFQPKDILLLDTALDDETYQQRCEQLKLRPIELKGEYFSSQYRS
                     VGMAEISVMPEAECIGKTIRELKFRSRYHLSIVGLKRGDEIIQEELLDTPLKFGDILL
                     VMGVWQQIHRMDDDHRDFFLLRDPAESKNAPPALSQAPHALFSVLTMVLLMITGIVPN
                     VMAALIACLMLGKFRCVDMKSAYDSIHMPSIVLIVGMMPFSIALQKTGGVDLTVRLLL
                     DAMQGLDVHFVLIVLFVVTAIISAFISNTATAILVMPIAIAIANQLGYSPAPFVMTVA
                     VSASAAFMTPVSSPVNTMVLAPAGYKFIDFVKVGVPFTVLVMLVSVFVIPMLFPL"
     gene            complement(28430..28945)
                     /locus_tag="PXD69_000654"
     CDS             complement(28430..28945)
                     /locus_tag="PXD69_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltR family transcriptional regulator"
                     /protein_id="HDL6282878.1"
                     /translation="MMDYIDKLSEETTLRGFLSIANQRFAKAVEQLIERVFRKTDFAL
                     KSVVDSLFEHQGPLADIEVRLKVLLGLGVISPKVFEDISLFLEVKQHLNEEEDEFAFS
                     HPAVVKFAKDLHHIDFLPINELLNMKASAANKDSMLFQMQQMRLEKMVRSSLILAVTE
                     IDEQLNVESPL"
     gene            complement(28957..30096)
                     /locus_tag="PXD69_000655"
     CDS             complement(28957..30096)
                     /locus_tag="PXD69_000655"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDL6282879.1"
                     /translation="MNALHFGAGNIGRGFIGKLLADARIFVTFADINQTQIDQINQNK
                     QYGVKIVGDDSRVEIVKNIAAINSKDENAVIEQVKNTDLITTAVGPNVLGFIAPLFAK
                     ALVARVESGNTQPLNIIACENMVRGTTFFKGKIFEHLTAEQQAEIEKVVGFVDSAVDR
                     IVPPAEPNPADPLEVTVEEFSEWIVDQTQFKGDIPNIKGMELTDNLMAFVERKLFTLN
                     TGHLICAYLGKQAGVKWIKEAIAIEEIKTQVKATMEESGAVLIKRYGFDPQAHSAYIE
                     KILKRFANPYLNDDVNRVGREPIRKLSENDRLIKPLRGTLEYGLPYQNLVKGVVMALQ
                     YRNEEDPQAVELAEFIANHGVAAAVEKYTGLTDQAVIAQVVELYQ"
BASE COUNT         8948 a         6209 c         6409 g         8566 t
ORIGIN      
        1 atcgagtgca aattatgaat caatcttatt ttaacttact aggaaacatt acttggctat
       61 ggatgaactc ctccctccac aaagaatgga gctgtgaact actagcacgc aatgtgattc
      121 ctgcaattga aaatgaacaa tatatgctac ttatagataa cggtattccg atcgcttatt
      181 gtagttgggc agatttaaac cttgagactg aggtgaaata tattaaggat attaattcgt
      241 taacaccaga agaatggcag tctggtgaca gacgctggat tattgattgg gtagcaccat
      301 tcggacattc tcaattactt tataaaaaaa tgtgtcagaa ataccctgat atgatcgtca
      361 gatctatacg cttttatcca aagcagaaag aattaggcaa aattgcctac tttaaaggag
      421 gtaaattaga taaaaaaaca gcaaaaaaac gttttgatac atatcaagaa gagctggcaa
      481 cagcacttaa aaatgaattt aattttatta aaaaatagaa ggagacatcc cttatgggaa
      541 ctagacttac aaccctatca aatgggctaa aaaacacttt aacggcaacc aaaagtggct
      601 tacataaagc cggtcaatca ttaacccaag ccggcagttc tttaaaaact ggggcaaaaa
      661 aaattatcct ctatattccc caaaattacc aatatgatac tgaacaaggt aatggtttac
      721 aggatttagt caaagcggcc gaagagttgg ggattgaggt acaaagagaa gaacgcaata
      781 atattgcaac agctcaaacc agtttaggca cgattcaaac cgctattggc ttaactgagc
      841 gtggcattgt gttatccgct ccacaaattg ataaattgct acagaaaact aaagcaggcc
      901 aagcattagg ttctgccgaa agcattgtac aaaatgcaaa taaagccaaa actgtattat
      961 ctggcattca atctatttta ggctcagtat tggctggaat ggatttagat gaggccttac
     1021 agaataacag caaccaacat gctcttgcta aagctggctt ggagctaaca aattcattaa
     1081 ttgaaaatat tgctaattca gtaaaaacac ttgacgaatt tggtgagcaa attagtcaat
     1141 ttggttcaaa actacaaaat atcaaaggct tagggacttt aggagacaaa ctcaaaaata
     1201 tcggtggact tgataaagct ggccttggtt tagatgttat ctcagggcta ttatcgggcg
     1261 caacagctgc acttgtactt gcagataaaa atgcttcaac agctaaaaaa gtgggtgcgg
     1321 gttttgaatt ggcaaaccaa gttgttggta atattaccaa agccgtttct tcttacattt
     1381 tagcccaacg tgttgcagca ggtttatctt caactgggcc tgtggctgct ttaattgctt
     1441 ctactgtttc tcttgcgatt agcccattag catttgccgg tattgccgat aaatttaatc
     1501 atgcaaaaag tttagagagt tatgccgaac gctttaaaaa attaggctat gacggagata
     1561 atttattagc agaatatcag cggggaacag ggactattga tgcatcggtt actgcaatta
     1621 ataccgcatt ggccgctatt gctggtggtg tgtctgctgc tgcagccggc tcggttattg
     1681 cttcaccgat tgccttatta gtatctggga ttaccggtgt aatttctacg attctgcaat
     1741 attctaaaca agcaatgttt gagcacgttg caaataaaat tcataacaaa attgtagaat
     1801 gggaaaaaaa taatcacggt aagaactact ttgaaaatgg ttacgatgcc cgttatcttg
     1861 cgaatttaca agataatatg aaattcttac tgaacttaaa caaagagtta caggcagaac
     1921 gtgtcatcgc tattactcag cagcaatggg ataacaacat tggtgattta gctggtatta
     1981 gccgtttagg tgaaaaagtc cttagtggta aagcctatgt ggatgcgttt gaagaaggca
     2041 aacacattaa agccgataaa ttagtacagt tggattcggc aaacggtatt attgatgtga
     2101 gtaattcggg taaagcgaaa actcagcata tcttattcag aacgccatta ttgacgccgg
     2161 gaacagagca tcgtgaacgc gtacaaacag gtaaatatga atatattacc aagctcaata
     2221 ttaaccgtgt agatagctgg aaaattacag atggtgcagc aagttctacc tttgatttaa
     2281 ctaacgttgt tcagcgtatt ggtattgaat tagacaatgc tggaaatgta actaaaacca
     2341 aagaaacaaa aattattgcc aaacttggtg aaggtgatga caacgtattt gttggttctg
     2401 gtacgacgga aattgatggc ggtgaaggtt acgaccgagt tcactatagc cgtggaaact
     2461 atggtgcttt aactattgat gcaaccaaag agaccgagca aggtagttat accgtaaatc
     2521 gtttcgtaga aaccggtaaa gcactacacg aagtgacttc aacccatacc gcattagtgg
     2581 gcaaccgtga agaaaaaata gaatatcgtc atagcaataa ccagcaccat gccggttatt
     2641 acaccaaaga taccttgaaa gctgttgaag aaattatcgg tacatcacat aacgatatct
     2701 ttaaaggtag taagttcaat gatgccttta acggtggtga tggtgtcgat actattgacg
     2761 gtaacgacgg caatgaccgc ttatttggtg gtaaaggcga tgatattctc gatggtggaa
     2821 atggtgatga ttttatcgat ggcggtaaag gcaacgacct attacacggt ggcaagggcg
     2881 atgatatttt cgttcaccgt aaaggcgatg gtaatgatat tattaccgat tctgacggca
     2941 atgataaatt atcattctct gattcgaact taaaagattt aacatttgaa aaagttaaac
     3001 ataatcttgt catcacgaat agcaaaaaag agaaagtgac cattcaaaac tggttccgag
     3061 aggctgattt tgctaaagaa gtgcctaatt ataaagcaac taaagatgag aaaatcgaag
     3121 aaatcatcgg tcaaaatggc gagcggatca cctcaaagca agttgatgat cttatcgcaa
     3181 aaggtaacgg caaaattacc caagatgagc tatcaaaagt tgttgataac tatgaattgc
     3241 tcaaacatag caaaaatgtg acaaacagct tagataagtt aatctcatct gtaagtgcat
     3301 ttacctcgtc taatgattcg agaaatgtat tagtggctcc aacttcaatg ttggatcaaa
     3361 gtttatcttc tcttcaattt gctagagcag cttaattttt aatgattggc aactctatat
     3421 tgtttcacac attatagagt tgccgtttta ttttataaaa ggagacaata tggaagctaa
     3481 ccatcaaagg aatgatcttg gtttagttgc cctcactatg ttggcacaat accataatat
     3541 ttcgcttaat ccggaagaaa taaaacataa atttgatctt gacggaaaag ggctttcttt
     3601 aactgcttgg cttttagctg caaaatcgtt agcgttgaaa gcgaaacaca ttaaaaaaga
     3661 gatttcccgc ttacacttgg tgaatttacc ggcattagtt tggcaagata acggtaaaca
     3721 ttttttattg gtaaaagtgg ataccgataa taaccgctat ttaacttaca atttggaaca
     3781 agatgctcca caaattctgt cacaagacga atttgaagcc tgctatcaag ggcagttaat
     3841 tttggtcacg tccagagctt ccgtagtagg tcaattagca aagttcgatt tcacctggtt
     3901 tattccggcg gtgatcaaat accgaaaaat ctttctagaa accttgattg tttcgatctt
     3961 tttgcaaatt tttgccctaa ttacaccgct attcttccaa gttgttatgg ataaagtact
     4021 ggtgcatcga ggtttttcaa ccttgaatat cattacggtt gccttagcta ttgtgatcat
     4081 ctttgaaatt gtactaagtg gtttgagaac ctatgttttt tctcatagca ctagccgtat
     4141 tgatgttgaa ttaggcgcta aattatttcg acatttatta tcactaccca tttcttattt
     4201 tgaaaacaga cgagttggag atacagtcgc tagggttaga gaattagatc aaattcgtaa
     4261 tttccttacc ggacaagcat taacctcggt gttagatctc ttattctctt ttatcttttt
     4321 tgccgtaatg tggtattaca gcccaaaatt aaccttggta attcttggtt cattgccctg
     4381 ctatatttta tggtcaattt ttattagtcc gattttaaga cggcgtttag atgagaaatt
     4441 tgcccgaagt gctgataacc aagcattctt agttgagtcg gtaacagcca tcaatatgat
     4501 taaagcgatg gcggttgctc cacaaatgac ggatacatgg gataaacagc tggcaagcta
     4561 tgtttcatca agtttccgtg tcaccgtatt agcaaccatt gggcaacaag gtgtacaact
     4621 tattcaaaaa accgttatgg tgattaacct ttggttaggg gcacacttag ttatttcagg
     4681 cgatctgagt attgggcaat taattgcctt taatatgcta tcagggcaag tgattgcacc
     4741 ggtgattcgg ctggctcagc tctggcaaga tttccaacaa gttgggattt ccgtcactcg
     4801 cttaggtgat gttttaaact ctccaaccga acaatatcaa ggcaaattat cactaccaga
     4861 aataaaaggc gatatctcat ttaaaaatat ccgctttaga tataaaccag atgcaccaac
     4921 tattttaaat aatgtgaatt tagaaattag gcaaggagaa gtgattggga ttgttggacg
     4981 ttccggttca ggcaaaagta ctctgactaa attactgcaa cgtttttata ttcctgaaaa
     5041 tgggcaggtt ttgattgatg gacatgatct agccttagct gatccaaact ggctacgccg
     5101 tcaaataggt gtagtgctgc aagataatgt gttattaaac cgcagtatcc gagaaaatat
     5161 tgcgctatca gatccaggaa tgccaatgga gcgagtaatt tatgcagcaa aattagcagg
     5221 ggctcacgat tttatttcag aattgcgtga aggttataac accattgtgg gtgaacaagg
     5281 agcggggctt tcaggcgggc aacgccaacg gattgcgatt gctcgagctt tggtaaacaa
     5341 cccgaaaatc ctgatttttg atgaggcaac cagtgccctc gattacgaat ctgagcatat
     5401 tattatgcaa aatatgcaaa aaatatgcca aggcagaacc gtgattttga ttgcacatcg
     5461 tttatcgacc gtcaaaaatg cggatcgaat tattgtgatg gaaaaggggg aaattgttga
     5521 gcaaggcaag caccacgaat tactgcaaaa cagtaacgga ctttattcct acttacacca
     5581 attacaactt aattaagaag gaaaacaatg aaaatatggc ttagtggtat ttatgaattt
     5641 ttcctacgct ataaaaacat ttgggcagaa gtatggaaaa ttcgtaaaga attagaccac
     5701 ccaaacagaa aaaaagacga aagtgaattt ttaccggcac atttagaact gattgaaacc
     5761 ccggtttcta aaaaaccacg tctaattgct tatttgatta tgctattttt agttgtggca
     5821 attgtgcttg ccagtgtaag caaagttgaa attgtggcga ctgctcccgg taaattaact
     5881 tttagtggca gaagtaaaga aattaaaccg attgaaaacg ccattgtaca agaaattttc
     5941 gttaaagatg ggcagtttgt ggaaaaaggg caattattag tcagcttaac tgcattgggt
     6001 tctgatgcag atatcaaaaa gaccatggct tcactttctt tagctaaact ggagaactat
     6061 cgctaccaaa ctttgcttac tgccattgaa aaagagtcct tgccggtgat tgatttatct
     6121 agaaccgaat ttaaagattc atcggaagaa gatcgactac gtattaaaca cttaattgag
     6181 gagcaataca ccacttggca aaaacaaaaa acacagaaaa ctttagcgta taagcgtaaa
     6241 gaggctgaaa aacaaacaat atttgcctat gtccgtaaat atgaaggtgc aacacgtatt
     6301 gaacaagaaa aattaaaaga ctttaaggca ctttataaac agaagtcttt atctaagcac
     6361 gaacttcttg cgcaagaaaa taaattaatt gaggctcaga atgagctagc tgtttatcgc
     6421 tcaaaattaa atgaattaga aaatgatcta ctcaatgtaa aagaagaact tgaattgatc
     6481 acgcaattct ttaaaagcga tgtgttggaa aaattaaagc aacatattga aaatgaacgc
     6541 caacttcggc tcgagttaga aaaaaataat caacgcagac aggcctcgat gatcagagca
     6601 ccggtttccg gtacggttca gcaactgaaa attcacacta taggtggtgt tgttacgact
     6661 gctgaaacct tgatgatcat tgtgccggaa gacgatgtgt tagaggccac cgctctggtt
     6721 ccaaacaaag atatcggctt tgttgcagca gggcaggagg tgattattaa agtggaaact
     6781 ttcccttata cacgctatgg ttatctaact ggtcgaatta aacatattag cccggatgcg
     6841 attgaacaac ctaatgtagg cttagttttt aatgcaacta tagctataga taggaagaat
     6901 ctaacatcgc ctgatgggcg aaaaattgat ttgagttcag gtatgacaat aactgctgaa
     6961 atcaaaaccg gtgaacggag tgtaatgagt tatttactca gcccattaga agaatctgtc
     7021 acagaaagtt taagggaacg ctaatcgaac caaaacaaag ccataaaagc cattttgagc
     7081 ttttatggct ttatttttta gtccacaagc ggtcaaaaaa gcccaatttt ttacactttt
     7141 ataacaaatt gttctaacta aaaattacta attcttttct tttataagac gaatcctcta
     7201 ttttcatttc attaacattg aactagaaaa ggggatttat gagcctaagc attacgaatc
     7261 tttctcttgg ctaccgcaaa aatcagcaaa ggcttatttg aaaagcacgg tgtgcaggtg
     7321 gaaaaaccgg tgatgtttcg cagctgggct cagttggtgg aagccttttt aagtggcaat
     7381 gtgaacgtgg tgcatctgct ttcgcctatg agtttgtggg cgaaatatgg agcaaatgct
     7441 ccggtgaaag cggtaatgtg gaatcacttg gcaggttcgg ctttaacggt tcgccctgaa
     7501 atcaacagta ttgccgaact ctccggcaaa acggtagcaa ttccgttttg gtattcaatt
     7561 cataatatcg ttttgcaacg attattacga gaaaatggct tgaaaatcac cgaaaaagag
     7621 ccgaaaagcg gtgaagtgcg attaagtgta atggctccgt cagatatggt ggcagcgttg
     7681 gcaagtgagg caatttccgg ctttattgtg gcagagccgt tcaatgcgtt agcggaagcc
     7741 aaaggtgtgg ggaaggtgct gcgttttagt ggcgatgtgt ggaaagatca cgcctgctgt
     7801 ttaaccctaa tgcacgaata cgatattcaa caccgcccgg aatgggtgca aaaagtggtg
     7861 aatgtcttaa ccgaagccca agtgtccacg cttgccaacc gtgcagaaac cgctcaatta
     7921 ttggctcggg gcagcggcta cacgccgcac gatcaaaaag tgctggaaaa ggtactggct
     7981 ccaacccaag ctcagtggga taaatatatc gaaacagggg caattcaaaa ccctcagtgg
     8041 caccaacagc gaatcggttt ccaaccgtat ccgttcgatt cctatatgga agagctggtc
     8101 aaaatgctca aacagaccca cattgccggc aataatgcgt ttttacaaca gcttgacccg
     8161 gtagaggcag cgaaagcgat taacgagccg acctttgtgc gaaaagcgat tgagcaaggc
     8221 ggttgggttg aaacctttaa tttacaaacc ggttggacaa gaaccgagca aattagtgta
     8281 taagcgatag gaacgaacga tgaaacagaa atatatttac ggcttagccg gtttattact
     8341 gctactttta ggttggcagc ttggcacagc cttgttaagc caacggttgc cgatggcgtc
     8401 aatgttagct ccggcaaaaa cctgggaaag ttttacttgg ctgatttcct ccggcgaaat
     8461 ttttccgcac ttatgggcga gtttgcaacg cattgctgtc gggctactcg ctgcgttagt
     8521 gattggtgta ccgctgggct tattgctcgg cttctccaag caccttgaaa tgctttgcac
     8581 gccgtcattc caactactac gtatgatttc gccactttcg tggatgccga ttatcgtgat
     8641 gttacttggt gtaggcgatt tgccgattta ttttttactg gcgtttgcca ccgtttggtc
     8701 gttgattatt tccaccacct caggggtaaa aagcattgat ccacaatggt tacaactggg
     8761 tagagtaatg tcggctaccc gcaaagaact gctgtgcaaa attgttgtac cggctattac
     8821 cggacacgtt ctcaccggtt tacgtgtggc ggttgggatt gcgtgggtgg tgctggtacc
     8881 gtgcgaaatg ctaggcgtga atcaaggact cggctatttt attttagaca cccgagaccg
     8941 attagcctat tccgaactga tggcggtaat tataattatc ggcttaatcg gctgggcgtt
     9001 ggatagctta atccgcttgg ctttagcgaa aggcggcaga taaattgaca agcggtcgaa
     9061 aaattgcatt tttttgcaaa aaatcgaccg cttgtttatt cccaaaaagc atattacctt
     9121 aatttatttt atttctaggg cataaaaaag cgatttaaga tagcgacaaa gtaaactaat
     9181 tatacgaggt aaacacaatg tcggttcttt catcttcttt tattcaatgg cttcagcaga
     9241 acgccgaaaa tttagatcaa tctaacgaac gagcggattt actcattcca caaattgccg
     9301 cactagggct atataaaatc ggcgtgccgg aaacgcttgg cggcagcggt ggcactttgg
     9361 ttgatgcgat caaagccgtt accgaactgg gtaatcactc gctggctgcg gcatttgttt
     9421 cgtggggaca tcgtaccttt atcgagcata ttatcgcctc aaaaaatcct attccccgcc
     9481 aaagctattt ggcggatctg ctaaatggca atttaaccgc aggaacaggt ttatccaatg
     9541 cgatgaaatt tctctccggc attgaagagt tgaatgtgaa tattcgtgaa gaaaacggta
     9601 aacgctattt aaatggccgc ctgccttggg taaccaattt acgttcatac cgctttgttg
     9661 ctagtttcgt tgccggtttt caagacgaac gcaaaccgct agtgattgca attccctcca
     9721 ccgccaaagg cttaacccgc accaaagaat tggaatttat cgcattgcaa ggcacgaata
     9781 ctacctctct cgtatttgag aatgtggaat tacaagatga atggattttg gctgatgacg
     9841 cgcctgagtt tttagcagcc actcgccctg cgttcttagg tttacaattt ggtttgccct
     9901 ttggcttggt tgaacgtagt ttggcggaaa tcgaaaaatc gctccctttc cgtgcaattc
     9961 tcgcctctga gtggcaagct caagttgatg ccctcaacga tattaaaact cgtctgttta
    10021 atggcttaaa tgaagaaggt tattttgtgc gtaatccgaa agagcttttc caagcgagaa
    10081 ttgacattgt caatgtcgtc gcccaaacta ttctgctaga actgcaagcg agtggcggac
    10141 gtggctatct gaaaaatgat acttcaggct tcagccgccg ttggaaagaa gcggcatttc
    10201 tgcccgttgt tacgccaagt gcggtacagc tgagaatggt gctggcgaat agttaagcgg
    10261 ataagagaca aattgttgcc tcttttattt tgcaaaaaat agtctaaata taaccgcttg
    10321 caataaaaat aaaaaaggat gcatttttta tgcttcctca attttacggc tatctattat
    10381 gcaaaaggct gcaattcagg gttaattgga atttcggcaa tgttgttaac gtagttacat
    10441 aatgttgcca agctcacgcc taaaatcaca tcaatcgcat tttgttggtt gtaacctgcg
    10501 gcaaaaaatt cgtttaattg ggcttcggtt aatttggctt tttgtaacat tactgcaagg
    10561 gtgaagcgag ccagagtgtc taatttgtta tcgtctatgc gagccgtggc acgtaaagca
    10621 tttaccactt cttcaggcat ttttaatgct tttaaggcga ttttagtatg acctgccacg
    10681 cagaaaccac agccgttgac cactgctgcg gtgatttgta ccacttcacg ttcttcagcg
    10741 gttaagctgt tacgactatt aataccaccc acagtgcggt aagtttccag tgctgttggt
    10801 gcgttggcta atacgccgat cagatttggg ataaaaccgt ttgcttgttg cactgctttt
    10861 agggcttctt gtgccgtttc aggagcggat tcaatagtgt gaatttgaaa ttgagacata
    10921 aatgttcctt atcaggttgt ttattggtgt ggctcatcat aaagaaaagg ctaatttaga
    10981 acaaatcaaa atcactattt aatataacta aaagatctta aagggagtat agttgcctat
    11041 actccctttg tttatgcaca ggttgcgttt ttactcttct gcgtcttctt ttgcccattc
    11101 taatgagcgg cgaacggctt ttttccaacc tttatagcgt ttcgcccgtt tttcttggtc
    11161 gccgtccggt gtgaaggtgc gttcaatttc cgctttgtct ttcagttctt ccaaatcttt
    11221 ccagaagccg acagcaatac ccgcaagata agctgcccct aaagcagtga cttctttcac
    11281 tttcggacgc tcaactttgg tgtctaaaat atcggcttgg aactgcatta agaagttgtt
    11341 tgcggttgca ccaccgtcca cacgtaacgc ttgtagtttc gctttggagt cagactgcat
    11401 tgcttctaac acatctcggg tttggtaagc gatagactct agggtcgcac gcacaatgtg
    11461 gttacggttt gccccacggg ttaaaccgaa aattgagcct cgtgcatacg gatcccaata
    11521 tggagcacct aagccggtaa aggcaggtac aacataaaca ccgttagagt catcttcttt
    11581 agtggcaaaa tattcgctgt caaagctatc gtgaacaatt ttcagctcat cacgcagcca
    11641 ttgaatagac gcaccggcaa taaatactga accttccaac gcatattccg gctcgccttt
    11701 tgcgttacac gcaatggtcg ttaataaacc gttttcagat tgaatcgcag tgttaccggt
    11761 gtgcatcaac ataaaacagc ctgtaccata ggtattcttc gcttgtcctt ctttcacgca
    11821 taaatgaccg tagagagcgg cttgttggtc acctgcaata cccgcgaccg gaatacgcac
    11881 accgccttga ccgccgatat tagtttgccc gtaaacttct gatgaatttt tcacttcagg
    11941 taacattgag cgtggaatat tgagcaattc cagcatttta tcgtcccatt gtttggtgtg
    12001 aatgttaaac aacatagtac gagaagcgtt ggtgtaatcg gtaacgtgta cccgcccttg
    12061 ggttaatttc cacaccagcc aagtatcgac cgtaccgaac agcaattcgc cacgttctgc
    12121 tttttctctt gccccttcta cgttatctaa aatccacttc actttagtgc cggagaagta
    12181 cggatcgact accaagcctg tcgttttacg aatatattcc tcgtgtccgt ctgcttttaa
    12241 tttatcggta atatccgatg tgcgacgaca ttgccacaca atcgcattat aaacaggttt
    12301 accggtctct ttttcccaca caatcgtggt ttcacgttgg tttgtgatcc cgattgcggc
    12361 aatgctatcc ggcttaatac cggcttttgc caccacttca tttaaggtgg aactttggct
    12421 tgaccaaatt tccatcgggt tatgttctac ccagcctgct tgcggataaa tctgggtaaa
    12481 ttcacgctga gccacttcaa ccacattggc atttttatct aataaaaccg cacgagagct
    12541 ggttgtacct tggtcgagag cgatgatata ttgtttttcc atagattact cctgagtatt
    12601 tgctggaaga ttgttatgaa tgaggttttt ataaccccaa gcaccgaata atgcaccgca
    12661 gattggggcg acaatcggaa tgatgaaata cggaatttct tttccgcctg ttaaagcaat
    12721 ttcaccccaa ccggcaagat aagcaaagag tttcggacca aaatcacgag ccgggttcat
    12781 cgcaaagccg gttaacgggc cggttgctcc accaattacc gcaatcaata aaccgatgag
    12841 taatgcggct aaggctttat tcggcaagcc gtttttatca tcgccaatcg ctaaaatagt
    12901 ggacatcaac accacagtaa tcacaaattc aacgatgaag gcggtaacca atgtaatatt
    12961 agggtttgga taggtggaga acacaccggc aaagccaaca gtttcgcccc gagtaatgcc
    13021 ttgagcggct tcggcggcag taaagagatc gctatacata aaataaatca gtgcgacaga
    13081 gcaaaacgct ccggcaactt gggcgatgac atagggcaaa attttatgct tttcaaagcc
    13141 gtagaatgcg gcaagtgcta tagtgaccgc agggttaagg tgagcaccgg aaataccggc
    13201 agaaatgtag attgccatgg aaacaccaag cccccaaacg atggaaattt cccataaacc
    13261 gaaattcgca ccggctacct gagcagcagc aacacaacca gcaccaaaga aaagaataaa
    13321 acctgtaccg ataaattcgc caatacaggc attacgtaag gatttgctca taaagtttct
    13381 ccttaagatg aaaatgattg gaaagtgatg aaaaaatgtt tgaatatgaa catatttcgg
    13441 agtgatattg ccaaagcggc attttttaag caaataggaa gtttcaaatt tgtgaaatcc
    13501 atcacattat ttttctaaat cactcatttt taggtatgat gtgagaaaac gttagatgag
    13561 gaaaaatgat gtcttcaata cttatgattt caatcggggc ggtacttgga gctatgtgcc
    13621 gctggcaatt agccgtttgg ctaaacccga tactcagcca attcgccttt ggtactttag
    13681 cagcaaattg gcttggttgt ttgttaattg gtattgcaat ggggtttaat ttaggcgaga
    13741 gccagcggtt gctgttcatc agcggttttt taggcagttt taccaccttt tccagtttct
    13801 ctttagaact aacggaaaaa ctattagcag aaaaatgggg gcagtttgtg acagtgctga
    13861 gtttacattt aatcggtggg cttttgctta ctttgatagg tgtaatgctt gcaagagccg
    13921 ttacaagcgg tcgtttttgc tgaaaatttt gcaaataaaa aacctcccaa acgggaggtt
    13981 ttgcgagcga ttaaagtagg atattggaaa gtaataaacc aaatccgata ctgaaaatca
    14041 tactaagtaa gcccggtaac ataaagctat ggttgaaaat atatttaccg atacgggttg
    14101 tgccggtggt gtcgaagtca atcgaggcaa taatcgggcc gtagttcgga atgaagaagt
    14161 agccgtttac cgccacaaat accccgatta gcaccggtgc aggaatgccg atagcaatcg
    14221 ctacagggaa taaggttgca accgttgccc cttggctgtt taccaatacg gaaagtacga
    14281 ataatgcgaa agcaaatgcc caaggtgcgg tttcaactaa gcctgaaacc attgatttca
    14341 cttcgtccat atgaccttgc attaaggtat cgcctaacca agcaataccg aaaatcgcaa
    14401 tcactgcacg cataccggcg tggaagacag aacctttggt gatttcatta ccgtccggtt
    14461 tgcagaagaa gataatcaac gcaccaatac ttaacatcac aatttcaatc gtgtgagcca
    14521 tccccatcgg cttaccatca aacacagggc gaagagctgg aattgcgccc attaatacca
    14581 ctaataatgc accgaatagg aataagccta ctgataattt cgcagtcggt tttaacggta
    14641 attcggttgg attggtagta atgtgatttt ctttcacata ttcagggtct tgcaataagc
    14701 gttgataatt tgggtcgtct tttaattctt tgcccatttt atttacaaac acacaagcta
    14761 aacctaagcc caataaggtc gcaggaatag tcacacttaa cacgttaccc aatgtaacac
    14821 cttgaggttc aaggaaggca accacagcaa ctactgccgc agcaatcggg ctggcgacaa
    14881 tcgcaaattg tgaggcgatt actgccattg aaagtggacg ctcagggcgg ataccgttgt
    14941 ggcggcttac ctctgcaatt acaggtaata cagaataagc aacgtgacct gtaccggcaa
    15001 gcacggtgaa tgtccaagtt acaagcggtg cgataaaggt aatgtatttc gggtttttac
    15061 gcaaaatgcg agtggcaatt ttgatcatat agtccaaacc accggctgct tgcatggctg
    15121 ctgcagccga cacaaccgcc ataatcataa acattacatc aatcggtaaa ccggcaggtt
    15181 ttagcccaaa cccaaatgaa agaatggcta agcccaagcc accgaacacc cctaatccga
    15241 taccgcctac acgggcgcca accaaaatgc atagtaacac tatggcaaat tggataataa
    15301 acatcgcaga cataattttt tgctcctaaa taagtaaatg aaactctgtg tttgaaaaaa
    15361 tctgcatttt tcatcaaatt aatcggcacg tactatatca ataaataaaa ctaatctcta
    15421 taatctaaat caataaaatt tctaattaat taaggaataa tatgcaattt tcaaaaatgc
    15481 acggcttagg caatgatttt atggtggttg atggtgtaac ccaaaacgtt taccttaccg
    15541 aagagatgat ccgtacgctt tctgatcgcc atcgtggtat cggtttcgac caacttttat
    15601 tggttgaacc gccttacgac cctgaattag attttcacta tcgcattttt aatgcagacg
    15661 gcagtgaagt gtcgcaatgt ggcaatgggg cgagatgttt tgcccgtttt gttacgctca
    15721 aaggcttaac caacaaaaaa gacattcacg ttagcaccgc aaaaggcaaa atggtgctaa
    15781 gtttgcaaga agacggcaaa gtgcgtgtga atatgggcga accgatttgg gaaccttcgc
    15841 aagtgccttt tacagcaaat aaatttgaga aaaactatat tttacgcacc gagctacaaa
    15901 ccgtgttatg tggcgtggtt tcaatgggga atccgcactg cgtactgcaa gttgatgatg
    15961 tgaaaaccgc cccggtaaat gaactcgggc cgttactaga aagccacgag cgttttcctg
    16021 aacgggcgaa tatcagcttt atgcaagtag tgaatcgcaa tcacgttaaa ttacgggtgt
    16081 atgagcgtgg agcaggcgaa acccaagcct gtggtagcgg tgcgtgcggc acagtggcgg
    16141 tcggcattat gcaaggcttg ttagataaca aagtgcaggt ggatttaccc ggtggaacgc
    16201 tgattattga atggcaagga gtagggcatc ctctgtatat gaccggcgat gccacccaca
    16261 tttatgatgg atttattaaa ctgtaagttt tcccataggg aggcaagcgg tttattttta
    16321 ccgttttttt gcaaaatagg gttggtttat acaaaagtac cagcgtggac gctggcacta
    16381 tcagactgat gtataacttt tgtttaaatt caacttatag atggtgcaag cgtcctcgct
    16441 tgtaccaaaa caggtttcac tcgagtaact tcttcaccaa ctccaacacc acaggtaatt
    16501 cggtaacacc ttctctatcc aaaaaatgcc cgccttgatt taaccgaata taatccgcgt
    16561 gcaaatgttg ggctaacgca tcactgtatt ggtgattcac gaccttatca tctaacgcac
    16621 ttaccacata gcttggaaag ctcgatacgc tcggcaaaat cgcataatag ttggtaaagg
    16681 cagacagttc gggtaagttt tctaccggtt gatagaaccc cgacacaaac accgcccctt
    16741 taatcttggc gtaatttttg gctaaaaaat tcaaaatggc aatgcaacct aaactatgcc
    16801 cgacaaaaac cgtttgatcg gtcagctcca cattttgtgc aagatgattt aaccaaccat
    16861 ctaatgacgg ctttgccgaa tccggcatat tcaaccgctc acaactgaca ccacacttcg
    16921 ctaattcttg ctccagccaa ggaaaccaat gcttatcggc attcgccgta taaccgtgta
    16981 cgatataaac ctgtgccatt tcacacctcc tgattcacca aagattgtac catagcttaa
    17041 tcaggaaaaa acaagcggtg atttttttaa atttttttgc aactcaggta aaatagcacg
    17101 catttacgca aagaggtcat caatgaacgt ttggatttta cttgcgattt ccatctgcct
    17161 cgaaatcgct gccaccaatt tactcaaatt aagcaacggc ttcaccaaag ctataccgac
    17221 tattggctcg ctcgccttat acggtttatc cttttacttt ctctctatta ttttccgcac
    17281 cctaccggtc ggaatcgtgt atgctatttg gtccggcgta gggattgtcc ttaccgccct
    17341 tgttgcttat tttgctttcg gacagaaaat tgacttggca ggcttaatcg gcatcagcct
    17401 cattattgcc ggtgtattgg tgattaattt gttttctaaa gtgtgataca agcggttgat
    17461 tttacaaaaa aatctgcaaa atcaaccgct tgtaatagtt ggcaagaatt ataacccctt
    17521 taaccgccgg taaagctcag taaatttttg gcgtttttgt tgatattctg catagcgggc
    17581 aggggttggt tggtaaacct gttccagggg taacggctga cagaacgtag caatatcctg
    17641 atttgggttt agcgcaattt gagcgagttt tgccgcccct aatgccggac cgacatcacc
    17701 actggtgcgg tattcaaagg ttttaccgct aatatcggca agtagttgtc gccagtacac
    17761 actttttgct ccaccgccaa ttaatgcaat attgtcagca actacaccag tttcgtggag
    17821 tacctcaatc ccttcagcca aagcgaaact taccccttca atcacggctt ttgccatcgt
    17881 tatttggttg tcattatggc ttaatcccca aaatacgcct ttcgcataag ggtcattatg
    17941 cggtgtacgt tcacccgata aataaggtaa gaaaatagca tcagatgccg tttggcttgc
    18001 ttcaacctgt tggaataaag tcgatacatc ttttagtccc aatgatttta ctgcccaatc
    18061 taccgcagaa gcggcactta atattactga catcagatgc caacgatcag gtaaagcgtg
    18121 gcaaaaacta tgcactgctt tttgcggatt agcctgaaat ttatcgctca ctacaaaata
    18181 aacccctgaa gtccccaatg agagcatagc ttgcccggtt tggtataagc caatgccgat
    18241 tgcaccggca gcattatcgc caccgcctgc cacaatcggc acagatttca ttttccattg
    18301 ctcggcaagg gttggacgta aataacctgt gatttgattg ccttcaaaca gtttcggcat
    18361 attttcaatg tctaatccgc aagcatttag tagcgatttg ttccaattcc gtttacccac
    18421 atcaagccac attgtgccgg aggcatcaga catatcagag gcatattcgc cgctcatcaa
    18481 caagcggaga taatctttcg gtagcaagac tttgctgact ttttcggcaa tatcgggctg
    18541 gtgtttatca acccaacgca atttcggagc ggtaaagccc ggcatcatca ggttgcctgt
    18601 aatttcacgg ctatttggca caagctgttc taactcttcg cattccataa aactacgtcc
    18661 gtcattccat aaaatcgcag gggaaagtac attatctgcg ttatctagta aagtcgctcc
    18721 gtgcatttgc ccggttaaac caatcgcttt tactgcttgt aaatcttgag tagcggaaag
    18781 ttctaacatc gcttcattgg tggcattcca ccaatcttgc ggattttgtt cagaccacaa
    18841 tgggtgtgga cgaaaaatag gaagtgattt ttgtgtgatg gcaataatgt gttgattttc
    18901 atcgagtaac acgactttca cacccgatgt gccgagatcg attccaatgt acataaatat
    18961 tcctttgtta ttgaatacaa gcggtcattt tattcggaac atttgcaatt ttaagttttg
    19021 gagatctatc acccctcttt agcaaagagg gggatcagat cgagcttaac tttgcaaaaa
    19081 attgataaaa aacaaccgct tgtagattaa cggtaaatat agctatttac caaattttcc
    19141 aaatattctt gctgaccgga aacaggtttt ggatctaacc cttgggtttc cactattttt
    19201 gccaaatctt caaggcttgc tttaccgttt agaatttgta agcccaaatc ttggttccag
    19261 ccagcgtagc ggttatctac tactttctgt aatgcttgat cttccagcat ttttgccgca
    19321 cgttttagcg aaagggctaa cacatcaatt gccccgatat gtgcgtggaa taaatcatac
    19381 ggatcggtac tttggcggcg gattttcgca tcaaagttga aaccgcccgt tgtgaaacca
    19441 cctgctttta agatttcata catcacaagg gtgttttctt ccacgctgtt tgggaattgg
    19501 tcggtatccc aacctaattg cggatcacct cggttggcat caatcgagcc aaaaatatct
    19561 aatgcggtgg cagtcgcaat ttcgtgttgg aaagtatgcc ctgcaagagt ggcgtggttt
    19621 gcttcaatgt tgactttgat ctctttttct agaccaaact gttttaagaa accgtaaacg
    19681 gtggcaacat cgtagtcata ttgatgtttg gttggttctt gtggttttgg ctcaattaat
    19741 aaagtgccgt taaaaccgat tttgtgttta tgttccacca ctaactgcat aaagcgaccg
    19801 atttgttcac gctcacgttt taagtcagtg ttgagtaggg tttcataacc ttcacgtccg
    19861 ccccataata cataattttc gccgcctaag cgtttggttg cgttcattgc ggtaaagact
    19921 tgtgctgccg cccaagcaaa gacttccgga ttcggattgg ttgaagcacc cgacatatag
    19981 cgaggattgg taaagcagtt cgccgtaccc cataataatt tcacgcctgt ttcagcttgt
    20041 ttttgctcta aaatatccac aatagtgttg aaattgtgct gatattcttt gaaattgttg
    20101 ccttccggtg caacatccac atcgtggaag cagtagtaag gaatgcctaa tttttggaaa
    20161 aattcaaagg caatttccgc tttttgcttc gcaccttgca gtaaatcccc cgttttttgc
    20221 cagcttctgt caagcgaacc cacgccaaac atatcgttac ccgtccagca gaaggtgtgc
    20281 caatagcaaa ccgctaaccg cagatgttct gccatcgttt tgcctaaaac cacttcatcc
    20341 gggttgtaat gtttgaatgc aaacgggttg gtggaattag ccccttcata ttgtactttt
    20401 gagattttgt cgaaatagtt agacataata atgctcctat gaattggaaa aataatcttt
    20461 cggtaacatc atcggaaaat tatgcaaaac cttcaattac gatatttcgt ttttggattt
    20521 cgattattgg ttaatgtggc gtagatcaca aaagtgaaaa atcataatga tattaataaa
    20581 tatgataatt gaacttcatt tgaaataagc ccagactgct tacgggcgaa aaagatgctc
    20641 acattttcat aaccaatgag gtgaactatg aaacttaagt ctaaattatt agccattgct
    20701 acggcgactt taatggtact cagcaatgct tctgttgcta aagatctaaa aatcggtatg
    20761 tcaattgatg atttacgctt agagcgttgg caaaaagacc gagatatttt tgtgaataaa
    20821 gcggaaagct taggagcaaa agtcttcgtt caatcggcaa atggcgatgc aaccgcacaa
    20881 atctcacaaa ttgagaatat gttgaataaa gatattgatg tattggtgat tattccgttt
    20941 aacggcgaag tgttatccaa tgtgattgcc gaggcgaaga aagaaggtgt taaggtactt
    21001 gcttacgacc gcttaatcaa taatgccgat gtggattttt atgtttcatt tgataatgaa
    21061 aaagtaggtg aattgcaggc taaaagcatt attgggcaaa agccggaggg gaattatttc
    21121 ctaatgggtg gttcacctgt agataataac gcgaagctgt tccgtaaagg tcaaatgaag
    21181 gtgctacaac cgttaattga cagtggaaaa attaaagtgg taggcgatca atgggtagat
    21241 tcttggcttg ctgaaaaagc attacagatt atggaaaatg cactaactgc taataaaaat
    21301 aatattgatg cagttgtagc ttcaaacgat gcaaccgcag gcggtgcaat tcaagcgtta
    21361 agtgcccaag ggttatccag caaggttgca atttccggac aagatgcaga tttagccgca
    21421 attaaacgta ttattgccgg tacgcaaacg atgacagtgt ataaaccaat taccaattta
    21481 gccgacaaag ctgccgaaat tgctgttgca ttaggtaaag atgagaaagt agaaatgaat
    21541 gctcaattaa ataacggtat gaaagaagta ccggcatatt tattagagcc ggttgttgta
    21601 actaaagaaa atattgatga cacagtaatt aaagacggct tccataccaa agatgcagta
    21661 tataaataaa tcactttaat ttttctagat ggcgaggctt cctcgccatt tttgaaaata
    21721 aggggctaac taagtatggc gaaattatta gaaatgaaga acatcactaa aaaattcggt
    21781 gaggttgtgg cattaaataa tatttcaatt tcccttgaaa ccggcgaaat actttcttta
    21841 tgtggtgaaa atggttcagg caaatcaact ctgatgaaag tattatgtgg aatttatcct
    21901 gccggtgatt atgaagggga aatctatttt tccggcgaaa aattgattgc cagaaatatc
    21961 aaagatactg aagaaaaagg catttcgatt attcaccaag aattgacctt agtaaaaaat
    22021 atgtcgattt tggagaatat gtttttaggg aatgaaatta ccaaatcagg gattacagat
    22081 gacaatgaaa tgtatctgcg ttgtaaaacc ttacttgaac aagtgcagtt ggatattgac
    22141 ccaaacacca aagttggaga gctaggttta gggcaacaac agttggttga aattgccaaa
    22201 gcattgaata aacaggtacg gttgttgatt ttagacgagc ctaccgcctc gttaaccgaa
    22261 aaagaaaccg agattctgct gagtttaatt aaagatttac aagctcacaa tattgcttgt
    22321 gtttatattt cacacaaatt gaatgaagtg aaagccattt ccgacaaaat ctgtgtcatt
    22381 cgagacggcg aacatatcgg tactcgcagt gcagagggaa tgagtgaaga cgatattatt
    22441 acgatgatgg ttggacgtga gattacctcg ctctacccac acgagccaca caatattggt
    22501 gaagaagtcc ttcgagttga aaatttaacc gcttggcacc caaccaatac acatatcaaa
    22561 cgggttgata atgctaattt tgtactacgc caaggtgaaa ttttaggtat tgctggtttg
    22621 gtcggttcag ggcgaaccga gatggcacaa tgtatttttg gctcttacca aggcaaatat
    22681 caaggtgata tttttctgca taagcaaccg attaaaatca aaaattgtgc acaagcgatt
    22741 gaaaaccata ttgtgatggt gccggaagat cgcaaaaaac acggcatcat tccaattatg
    22801 ggggtgggta aaaacataac tctctcttca ttaccgcaat tttgttttgg caaaaaagta
    22861 ataaatgaac cgctggaaga aaccattatc aaccaatcta ttgcaaaact gaaagtgaaa
    22921 acttcctcgc ctgaattagc aattggacgg ttaagtggcg gtaatcagca aaaagcaatt
    22981 ttggcaaaat gcctattgct taaccctaaa atcctgattt tagatgagcc gacccgtggt
    23041 atcgacgtgg gagcaaaata tgaaatttat aagctcatca accaattagc taaagaaggt
    23101 atggcaatta tcgtcatttc ctccgaatta cctgaagttt taggcattag tgatcgtgta
    23161 ttggttatgc accaaggcaa aattaaagca gatttgatta accaagacct tacccaagaa
    23221 aaagtaatgg aagcggcact caaggagtaa cctatgaata agttaaaatc gattaattta
    23281 caagtttata ttatgctgat tgcaattgtt gtgattatga gctttttctc tattgcaact
    23341 gacggtgctt atttaagtgc cagaaatatc tccaacctgt tacgccaaac ctccattacc
    23401 ggtattcttg ccatcggtat ggtatttgtg attatttccg cagaaattga tttatcggtt
    23461 ggctcgctaa tgggcttact cggtggattt gccgccatca gtaatgtatg gtggggctgg
    23521 ccgctctcgt taactattat agttacttta attttaggcg tcatgctggg tgcttggagc
    23581 ggttggtggg ttgcttatca aaaagtgccg tcctttattg taactcttgc cggtatgctg
    23641 gcgtttcgtg gtgtattggt cggcttaacc aacgggacaa ccgtttcacc gattagcaat
    23701 gaaatgacaa ccattggtca aggctatttg cctgatatgg tgggtatgat tttaggtact
    23761 atcgggatat tttgctttat tgtttggggt agctaccaac gcaaagccag acaaaaactc
    23821 aatcttactg tgccttctat gtcgaaagac acgctgaaat acggactagt tgcaattatc
    23881 gtattaggtg cgatctacct actcaatgat taccgtggtg tgccattccc ggtattggtg
    23941 ttggtgattc tagccattgc cggcacattc ttggccagaa aaaccgcctt cgggcgtcac
    24001 atttatgcga ttggtggcaa cattgatgcc gctcgcctct cggggatttc agttgaaaaa
    24061 gtcaaacttg cgatttttgc cttaaacggc ttattagttg ccattgcagg cttgatttta
    24121 agctcacgtc ttggagccgg cgcaccttcc gccgggcaaa atgccgaatt agatgcgatt
    24181 gccgcctgcg tgattggtgg agccagttta gccggcggta tcggtagcat ttatggcgta
    24241 gttattggag catttattat tgctttgctg gataacggta tgagtatgct tgatgtgcca
    24301 accttctggc aatatatcgt taaaggtgga attctactgc ttgcagtttg ggtagatacc
    24361 atcagcaaga aaaaagccta attggataac aagcggtcaa tctcgactat ccaacgggaa
    24421 atccggcata atcgggctaa aaatgggaac tattgtgcgt tttgccgtct ttttagcatt
    24481 tgctacggca accagctcca ccaagtgcgg tggcatttcg ccttgtttgg caaggttgca
    24541 aaggtaggtt atcgctttaa tccggctcat tgagccttcc agttccaaca catacgccac
    24601 cagtgccatt cgtgcatcag caatttctcg ctgtttggtg gtcaggtttc ccacatccac
    24661 ctccgcacgc actgccggta actttttcgg cttggcttcc accaccgccg acataaagcg
    24721 ggagcggatt tcggtttgga tttcttgagg gaggtttgag agtgcaaatt ctaaaatttc
    24781 tcccccaact ccaacctttt tatgagtagt ccatccttgt ttctttgcct gatacaaaac
    24841 tccttgcttt gttttaggta aacaggctaa acttaactca gccaattctt ttgccgaata
    24901 gtgtgttttt agactgtttt cactcataaa aacctcttta agctatctgt cggcaaattt
    24961 tttatggttt cgttgagcat aacgttcagg ccaaatttct tcgggtgata taccgattgc
    25021 ttcggcaata atacgctcac cctttaacca cggacgatct acagcgtttt tcaaggtgct
    25081 ggattgactg tagccatgct tcaatgagag ttgtctaagc gaccaacccg ctttatgtaa
    25141 agcagcgatg atgtcggccc tatgccagtc tttcgctgtt tttttaatat cttccaatgt
    25201 actcattaga taactccttt cgcttaacga tttagataat atacctattt ttactaaaaa
    25261 taaagtgtaa aaaggttgct ttatagttga tttatgagca aataaactta gtttgctgta
    25321 agttattgat ttatttatag gtttttagag tgtaaaaggc taaaaatctc aacttatttt
    25381 tttacagtta tgaaaataga gtgtaaaaag gttattggtt tcggtaaccg aatagaacag
    25441 agcagaaaaa atgcaaaatt aagtagatct gaggtttgtg atgccctagg aggtattgca
    25501 atatctacat tacaagcgtg ggaggctgat acaagagaac ctcctatatc aaaacttatg
    25561 gctttgtcac aaatacttaa cgttgagcct tgctacctat taacaggtga gcgacactcg
    25621 caaagcctta atgtcacaag agagccacag cctgtgtatg ccacaaaacc gcagacagaa
    25681 gaaggggaag tagttgttat caaagctaag ttacaagagg caatagaaac gttggaagag
    25741 gtgctggaaa ttacccaacg ggaaatgaag cctgccggaa aagcccaaat ggtgtgggct
    25801 ttctacgagc ttctcacgca agaaaaaagc gaaaaagaaa aaatggtggg attactcaaa
    25861 ctggtggcat aacaggggac aatatggaca aacaagccat tctcaaatta ttcagagaca
    25921 atagcactgc cggcaacagc cagccaagcc aagagcctat acaggtgttt aataacagca
    25981 acgtcatcat tcaaaacggc gataacgcca cggtgattgc cggctgcacg gtggataata
    26041 acaccaacct aacctgtgcc gataaacaac gtgtacacga cctcattcac agcttagagc
    26101 aacgcaaccg agccagccga gatgagggcg cttaaaattg ttttaaaatc cgtttaaacc
    26161 tgctcagacc tatgcaaaaa ataacgtaaa aatagcccat ttttttctat ttttgctcat
    26221 tttcgttttt tgcataactc accccaaaca aaaacggcga agccttgtat ttcctagcct
    26281 cgccgttatt tttccgccca aatttttttc tttctctcta tgcaaaaaag atcagtaccc
    26341 cacactatgt tgccagacat actcaacaat tttaccgtca acgtcagatt accaaaaatg
    26401 accgcttgta atttagagga gtgtttagag cggaaataac atcggaatca caaacaccga
    26461 caccagcatc accagtacag taaacggcac accaacttta acgaaatcaa taaatttata
    26521 gcctgccggt gctaatacca tcgtatttac cggtgaagaa accggcgtca taaaagcggc
    26581 ggaggctgaa acagcgaccg tcatcacaaa aggtgccggt gagtagccaa gttggttagc
    26641 aatcgcaatg gctatcggca taaccaaaat tgcagtcgct gtgttggaaa taaaagcact
    26701 gataatcgct gttactacaa ataatactat tagaacaaaa tgtacatcta agccttgcat
    26761 tgcatcaagt agaagcctaa cggttaaatc cacaccaccg gttttttgta aggcaataga
    26821 aaacggcatc atccccacaa tcaacacaat gcttggcata tgaatcgaat cataagcact
    26881 tttcatatcc acacagcgga acttgcctaa cattaagcag gcaatcaacg ctgccatcac
    26941 gtttggcaca atgccggtaa tcatcagcaa caccatagtc agcactgaga acagagcgtg
    27001 aggggcttgg cttaacgccg gaggggcgtt tttactttct gccggatctc taagcaagaa
    27061 gaaatctcga tgatcgtcgt ccatacggtg aatttgttgc catacgccca tcaccaataa
    27121 aatatcgccg aatttgagtg gcgtatcgag cagttcctct tgtatgattt catcaccacg
    27181 ttttaagccg acaatgctta aatggtatct tgagcggaat ttgagttccc gaatagtttt
    27241 accgatacat tctgcttcag gcataaccga aatttccgcc atacccaccg agcgatattg
    27301 tgaggaaaag tattcgcctt ttagctcaat cgggcgaagt ttgagctgtt cacagcgttg
    27361 ttggtaagtt tcatcatcga gggcagtatc aagcagtaaa atatctttcg gctggaaaat
    27421 ttcgtttacc gaggcactga cggtaatttt tctaaaccgc ttagtgcgtt gaattgcaat
    27481 gatgtttagc ccttgctcaa tccgtaaatt cagttgcccg atagatttgc cgacacagtc
    27541 tgaatctgct tccaccagca ccattttggc tcgctcttta agttgatact cttcaattaa
    27601 ctgcgacatt gaaaattttt gagcctgact gtgagtattg ctttgctcac cattatccaa
    27661 ccaacggcgg gcaatcagca tatagccgat gcccatcact aaaataatta atccaatcgg
    27721 agtaaaactg aagaaattga agccttcaaa acctgatttt actaattcgg aatgagcaac
    27781 aaggttgggt ggtgtggcaa ttaaggtcat cataccgctg ataagtccgg caacacttaa
    27841 cggcatcatt aaccggcgag gagaaattcc cattcccgag caaatggcaa gcaccaccgg
    27901 aatgaaaatc gccacaatgc cggtggaact cataaaagat ccaagcccgg caatacagag
    27961 cattagcagc accagcactt tggtttcgct cgctcccgac acccgcatca accaatcgct
    28021 gacttggttc gccacgccgg ttcgcaccaa accttctccg acaataaaga gcaacgcaat
    28081 cagcaccacg tttgggtcac ttaagcctgc caacacttct ttgactgata aaatattagt
    28141 caggctaaaa aacagcatta caattaaggc aaccacgtcc atacgcaact tgttttggat
    28201 aaattgccaa atcgcaaata ccaataacgc cattacccaa aacagttctt gcttaagaaa
    28261 atccggcaca aaagagagca acgattgcat aaccatatcc tccaaaatag ttagggatag
    28321 attacaccgc tttaagcaaa gaaaaaagcc gataagatca aaaagaaagg aaaaagcaat
    28381 cacgtacggc gtgaatgctc agtacaagcg gttagttttg acgaaatttt tacaatgggc
    28441 tttccacatt cagttgttcg tcaatttcag ttaccgccaa aatcaggctt gaacgtacca
    28501 ttttttccaa ccgcatttgc tgcatttgaa agagcatcga atctttattc gctgcactcg
    28561 ctttcatatt cagcaattca ttgataggca aaaaatcaat atggtgcaaa tctttggcaa
    28621 atttcactac cgccgggtga gaaaatgcga actcgtcttc ttcctcattc aaatgctgtt
    28681 tgacttcaag gaaaagcgag atatcttcaa acactttagg tgagatcacc cccaacccaa
    28741 gcaacacttt taaacgtact tcaatgtcag ccagcggtcc ttgatgttca aacaaggaat
    28801 ccaccacgga ttttaacgca aagtccgttt tgcgaaacac tcgttcaatc aactgttcaa
    28861 ccgctttggc aaagcgttga ttggcaatgc taaggaaacc acgcagggtg gtttcctcac
    28921 tgagtttgtc gatgtaatcc atcatagtgt caagaattat tgatataatt ccaccacttg
    28981 agcaatgacc gcttggtcgg ttaaaccggt gtatttttcc accgctgccg ccacaccgtg
    29041 atttgcaata aattcggcaa gttcgaccgc ttgtgggtct tcctcattgc gatattgcaa
    29101 tgccatcacc acgcctttga ccaagttttg atacggtaag ccatattcca acgtgccacg
    29161 caacggtttg atcaagcggt cgttttcgct cagtttgcgg attggctcac gccctacacg
    29221 gtttacgtca tcgtttaagt acgggttggc aaaacgtttg aggatttttt cgatatacgc
    29281 tgaatgggct tgtgggtcga agccgtaacg tttaatcagc acagcaccgc tctcttccat
    29341 tgtggctttc acctgagttt tgatttcctc aatcgcaatc gcctctttaa tccatttcac
    29401 gcccgcttgt ttgcccaagt aggcacagat taaatgcccg gtgttcaggg tgaacagttt
    29461 gcgttccaca aacgccatca ggttatcggt taattccatt cctttgatgt ttggaatgtc
    29521 acctttgaac tgggtttgat ccacaatcca ctcgctgaac tcttccaccg tgacttccaa
    29581 cggatcagca gggttcggct cggcaggtgg tacaattctg tccaccgcac tatcaacaaa
    29641 accaaccact ttttcaattt ctgcttgctg ctcggcagtt aaatgctcaa aaattttacc
    29701 tttaaagaaa gttgtgccac gcaccatatt ttcacaggcg ataatgttca gcggttgggt
    29761 gttgccactt tccacacgag ccactaacgc tttggcgaac agtggggcaa taaagccaag
    29821 cacattcggg ccgactgcgg tggtaattaa atcggtgttt ttcacttgct caatcacggc
    29881 attttcgtct ttcgagttaa ttgccgcaat gtttttgaca atttccacac ggctgtcatc
    29941 gcccacgatt ttcacgccgt attgcttgtt ttggttgatt tggtcgattt gagtttggtt
    30001 aatatcggca aaagtcacga aaatgcgagc atcagcaagc aatttgccga taaagccacg
    30061 cccgatatta ccggcaccaa aatggagtgc gttcattgat gattgttcct ctataaaacg
    30121 taggggcggg tc
//
LOCUS       DANLXO010000017        29338 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.017, whole genome shotgun sequence.
ACCESSION   DANLXO010000017 DANLXO010000000
VERSION     DANLXO010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 29338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29338
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.017"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            65..865
                     /locus_tag="PXD69_000656"
     CDS             65..865
                     /locus_tag="PXD69_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HDL6282880.1"
                     /translation="MCQLLGMNCNTPTDITFSFDGFRRRGGLTDHHTDGFGIAFFEGK
                     GVRVFRDNRPGASSPMAEAISQYQIKSLNVIAHIRKATRGDVNLENTHPFIRELWGEN
                     WVFAHNGTVEGVGVCEECHYQPIGTTDSEAAFCRIVSELKEMYPAKPSEKEIFDAVVQ
                     ITSRIAEHGVFNFVLSNGHWMIARCTTNLHYVCRKAPFGKALRDDDVSIDFSQYTKIT
                     DKVTIIATQPLTKNENWTKMKNGGYVFFKDGDVVYEIEGTLPEAQPHV"
     gene            complement(900..1793)
                     /gene="ispA"
                     /locus_tag="PXD69_000657"
     CDS             complement(900..1793)
                     /gene="ispA"
                     /locus_tag="PXD69_000657"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HDL6282881.1"
                     /translation="MSYLLATDLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLL
                     GGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPT
                     CHIAFDEATAILAGDALQSFAFELLATDPHLTDREKVVQVTELATASGAKGMCLGQSL
                     DLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGL
                     AFQVQDDILDVIGETDKIGKIVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALHSLE
                     QLPFDTTALKELANFIVKREN"
     gene            complement(1799..2029)
                     /gene="xseB"
                     /locus_tag="PXD69_000658"
     CDS             complement(1799..2029)
                     /gene="xseB"
                     /locus_tag="PXD69_000658"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDL6282882.1"
                     /translation="MAKKPTQDFESTLKELEAIVTHLESGDLPLEEALNEFETAIKLV
                     QQGQERLQKAEQRIQILLNKNDTAPLSDYERE"
     gene            2154..2942
                     /locus_tag="PXD69_000659"
     CDS             2154..2942
                     /locus_tag="PXD69_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDL6282883.1"
                     /translation="MQVTELNIYPIKSTQAIQVSQAFVEPKGLNFDREFMLAEPNGKF
                     ITARKDPELYRLAAFPIATGVMITHTSGQKCVALYQDFVEEQSSEVWGTHFNAKVAAE
                     AVNQWLSEIFGRAVQLRWLGSQSQRIVANFADHPMSFADSNPVSLMSLKSLEQVQQWS
                     PIPLEMARFRPNIVIDGNVAFEEEQWQQVQIGEVLFTKAALCTRCILITRDLNTLELD
                     PKSEPFRTLKEKHCDEKGKPVFGIHLVPQNSGVIKVGDPVIIQL"
     gene            2975..4924
                     /locus_tag="PXD69_000660"
     CDS             2975..4924
                     /locus_tag="PXD69_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDL6282884.1"
                     /translation="MYQRSQSRTVLFPILLFVGINLVILTLSRLVLGVWQSDRVSAVD
                     GWIPLILQGIRIDISSLCWLFGLPALFSVLCFHKNVLGSIWQTVLRIWLTVGSVFILF
                     MEVATPNFIETFDLRPNRLFIEYLVHPREVFTMLINGHLWAVICGIGIAMISLIIYWK
                     LSGWATKNLHFPSWKMRPLLALLVAAIVFVGGRSSFAHRGINPAMVAFSSDPLVNSLV
                     LNSGYSVLYAVQQLKDEDKSSEQYGKMSVEEMFNIVKQVRNRPASDYISDEIPTLTQN
                     KATYQGKPKNIVIILEESLGAQFVGSLGGKNLTPNLDKLSEQGWYFTNLYATGTRSVR
                     GIEAVTAGFTPTPARSVVKLTKSQTNFFSIAELLKRQGYHTSFIYGGEKHFDNMASFF
                     YGNGFQQIIDEKDYKNPKFTATWGVSDEDLFDKANETFNQLHKSGKPFFSLVFSSSNH
                     DPFEFPDGKIELYEQPKQTRHNAAKYADYAIGHFFELAKKSEYWQDTVFLVIADHDSR
                     AVGEHLVPIQHFHIPALLLGEHIQPRTDNRLVSQLDMPTTLLSVAGISGQYPMIGYDL
                     TQDIDPNRAFMQYDATQAMMRGNDVVVMRPNLPIEGFSYDKANYKLTPKEQPESFKKE
                     ALAHALLGSYLYKNQLYKLPEETKQ"
     gene            complement(4995..5912)
                     /gene="nagK"
                     /locus_tag="PXD69_000661"
     CDS             complement(4995..5912)
                     /gene="nagK"
                     /locus_tag="PXD69_000661"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HDL6282885.1"
                     /translation="MAIYYGLDVGGTKIELAAFNEKLEKLHSERVPTPQTNYQDWLTA
                     IKTLVETADTKFDEKGTVGLGIPGFVNRETGIAEITNIRVADGKTILKDLAECLGREV
                     RAENDANCFALSEAWDESNKPYSTVLGLIIGTGFGGGFVFDGKIHSGRIGMAGEVGHM
                     QLNYHALKLLDWDKAPIYECGCGNQACLDTYISGRGFELLFNDLVGEKISAKAIIERF
                     YQQETKVVAFVEKYIELMAISISNLITILDPDMIVFGGGLSNFDYIYQALPKALPKHL
                     MRSAKVPVIKKAIHGDSGGTRGAAALFLK"
     gene            complement(5925..6287)
                     /locus_tag="PXD69_000662"
     CDS             complement(5925..6287)
                     /locus_tag="PXD69_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282886.1"
                     /translation="MYQVFIAEPKDPNLEKGLLKHFIKSYLTQEELDFLHKILTNLPN
                     IRPFWGDTGYKYIVIDNVYFLYEVSESETKVILLGTKFNNKRKTFNFANTKTQQKSMK
                     KWINDLAIYKPHKINQSQ"
     gene            complement(6295..6456)
                     /locus_tag="PXD69_000663"
     CDS             complement(6295..6456)
                     /locus_tag="PXD69_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282887.1"
                     /translation="MEMSIEKIAELLSDKEKDDYPFSIEERQFAAQASADTWEAILNN
                     TIQPFDFKK"
     gene            complement(6525..7247)
                     /locus_tag="PXD69_000664"
     CDS             complement(6525..7247)
                     /locus_tag="PXD69_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDL6282888.1"
                     /translation="MFKKFSLYTLAMLLIPVVTWLANWHWSLAIQYAEFDFDYFLYLI
                     TETGSVPYAIITCVVFALLLARVVRKRYSLIFVITVCVASMVATQAIKTAMKSTFQEP
                     RPFVTALFQDKTDDFYQLTREQRGLAVMEKIGANQNFVTAHQAKEVGYSFPSGHTIFA
                     VSWLLLVVGFCRNMRGQAVVLAHFFAISWAALMLISRLRLGMHYPIDLFTSSLIAFLI
                     NLALFVWFVPWLESKKWFAKKP"
     gene            complement(7308..7622)
                     /gene="yhbY"
                     /locus_tag="PXD69_000665"
     CDS             complement(7308..7622)
                     /gene="yhbY"
                     /locus_tag="PXD69_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDL6282889.1"
                     /translation="MSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIDNALD
                     HHELIKVKVAGADRETKQLIIDAILRETKAAEVQTIGHILVLYRQSEEKKISLPKATK
                     AI"
     gene            7749..8507
                     /locus_tag="PXD69_000666"
     CDS             7749..8507
                     /locus_tag="PXD69_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL6282890.1"
                     /translation="MPTLSVAMIVKNEAQDLRACLDTVKDWVDEIVILDSGSTDETPQ
                     IAAEYNARFYTNTDWQGFGKQRQLAQQYVTSDYVLWLDADERVTAELKQSILQAVKND
                     EKNTVYKISRLSEVFGKQIRHSGWYPDCVVRLYRTEFAKYGDELVHEKVHYPKEAKIQ
                     KLQGDLLHFTYKDIHHYLVKSASYAKAWAIQRANAGKTASLFDGVTHAIGCFVKMYLL
                     KAGFLDGKQGFLLAVLSAHSTFVKYADLWNRTRK"
     gene            complement(8572..9612)
                     /locus_tag="PXD69_000667"
     CDS             complement(8572..9612)
                     /locus_tag="PXD69_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL6282891.1"
                     /translation="MKKLLVIRNDKIGDFMVCFPAFAMLKQSMPNVEITALVPSYTAP
                     LAELCPSIDKIIIDTANKKDKNEFNRILQAVKNEQFDAVICFVSDWHNAKLTWQSGIK
                     YRLAPATKLFQFLYNHRLTQRRSQSAKAESEYNLDLARAFLSKHNIPIVEPHTPYLSV
                     EQQTVQAQKAKLCEQLNITTVKKWVFVHSSTGGSANNLSIEQYAELIQGILAEFDCYV
                     VLTAGKGESEKAQQLAQQINHNNVVVYDKNEGLQDFTHSLACADLFIAGSTGPLHISG
                     ALNIPTIGFYPSRLSAIPRRWKPINDANKHIAFCPPSDKASQMNLTLISISEALKTIV
                     PFIRRMWNTPSL"
     gene            9796..11127
                     /gene="argG"
                     /locus_tag="PXD69_000668"
     CDS             9796..11127
                     /gene="argG"
                     /locus_tag="PXD69_000668"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005722481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDL6282892.1"
                     /translation="MSATILEALPLGQKVGIAFSGGLDTSAALLWMRKKGAVPYAYTA
                     NLGQPDEDDYNAIPKKAMEYGAENARLIDCRQQLAHEGIAAIQCGAFHISTGGIPYFN
                     TTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPKLKIYKPWLD
                     QLFIDELGGRLEMSKFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEELSTGMKIV
                     KPIMGVAFWDESVEIKAETVSVTFEEGVPVALNGKRIDDAVELIMEANRIGGRHGLGM
                     SDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQ
                     GRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEK
                     VEDAPFTPADRIGQLTMRNLDIVDTRGKLAVYTDAGLLAANNSVIPQLGKK"
     gene            11220..11681
                     /gene="rnhA"
                     /locus_tag="PXD69_000669"
     CDS             11220..11681
                     /gene="rnhA"
                     /locus_tag="PXD69_000669"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDL6282893.1"
                     /translation="MKLVEIFTDGSCLGNPGKGGIGILLRYNGYEKTVSKGYFQTTNN
                     RMELRAVIEALAMLKEPCKVQLNSDSQYMKNGIQKWIFNWKKNDWKTSDKKPVKNKDL
                     WVALDQEIQRHQIEWSWVKGHSGHRENEICDELAKQGANNPTLDDVGYIAD"
     gene            11827..12330
                     /locus_tag="PXD69_000670"
     CDS             11827..12330
                     /locus_tag="PXD69_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDL6282894.1"
                     /translation="MVDLIVIGIIAFSVLISLWRGFTNEALSLLGWVIAFFVASSFYP
                     YLSGYLTQINSVYLQNSEFLRNGIAAAILFILTLIVCGVINGLLGKVIDLSGMSITDR
                     ILGGAFGALRGILIVSAILFFLDTFTQASQTELWKSSLLIPHFDFIVKWFFEQLQANS
                     SFLNTTK"
     gene            12345..13862
                     /gene="purF"
                     /locus_tag="PXD69_000671"
     CDS             12345..13862
                     /gene="purF"
                     /locus_tag="PXD69_000671"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL6282895.1"
                     /translation="MCGIVGIIGNSPVNQAIYDGLTLLQHRGQDAAGIVTIDDENRFR
                     LRKANGLVSDVFQQEHMVRLQGNVGIGHVRYPTAGSSSVSEAQPFYVNSPFGITLVHN
                     GNLTNNAELKARLYNEARRHVNTNSDSESLLNIFAYFLDLYSTQHLSPDNIFETVRKT
                     NDSIRGAYACIAMIIGHGMVAFRDPFGIRPLVLGKREIEGKTEYMFASESVALDVVGF
                     EFVRDVLPGEAIYVTFDGQLHSQICADNPKLNPCIFEYVYFARPDSVIDGVSVYSARV
                     HMGELLGEKIKREWGRIIDDIDVVIPIPETSNDIAVRIANMLYKPYRQGFVKNRYVAR
                     TFIMPGQAQRKSSVRRKLNAIASEFKGKSVLLVDDSIVRGTTSEQIVEMARAAGAKRV
                     YFASAAPEIRYPNVYGIDMPTCEELVAYDRSVEEVAQMIGVDKLIFQDLEALYKSIQL
                     ENPTIHRFDDSVFTGEYITGDVDKCYLDSIARSRNDKAKAEAAKQATNLEIHNER"
     gene            complement(13896..14345)
                     /locus_tag="PXD69_000672"
     CDS             complement(13896..14345)
                     /locus_tag="PXD69_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282896.1"
                     /translation="MLKKLSAIFLLLPSAVLANNLQNITASTEPKYKISEIDVRILIR
                     QLNNIEQCIYPELAKPGYQQIYANWNLAENLTMQYFEYQLLKELLGEENQKLMQNDTL
                     STEYFHLLHSRLNHQKANVDPEKCDTFKPRYKEIYKSMENALTKKNQ"
     gene            complement(14358..15464)
                     /gene="mltA"
                     /locus_tag="PXD69_000673"
     CDS             complement(14358..15464)
                     /gene="mltA"
                     /locus_tag="PXD69_000673"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HDL6282897.1"
                     /translation="MNWKAYKKAIAAASVVAIATVLVACSSSGQKGKTTSYDAEKAKF
                     GAKYNGRHFMPYGTHFQAGRLGLNAAPVNQLDFLQQLSNVRAYSSLADSYAIAYGKIS
                     RWISSGGNINDLAKYGISTRLMRGEDGYQNVLMTGYYSPVIKARRTPQGQYQHPIYAM
                     PSSKRFSRAEIYAGALQGQGLELAYSNSMLDNFLLGVQGSGYVDFGDGRLNYFAYAGQ
                     NGFKYASVGRLLVEDGEIPKEKMSVQAIREWGQRNPSRVQGLLERNPSYVFFKNDPTG
                     QVKGSAGVPLVPLASVASDRSIVPSGSVLLVEMPLIDSKGNWTGKHEMRLMVALDVGG
                     AVKGHHFDLYQGIGDKAGHIAGLMKHYGRVWVLN"
     gene            15674..15750
                     /locus_tag="PXD69_000674"
     tRNA            15674..15750
                     /locus_tag="PXD69_000674"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15708..15710,aa:Met,seq:cat)
     gene            15901..17361
                     /gene="xseA"
                     /locus_tag="PXD69_000675"
     CDS             15901..17361
                     /gene="xseA"
                     /locus_tag="PXD69_000675"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDL6282898.1"
                     /translation="MSNILTVTQLNYSVRHLLEMEMSHIWLTGEISNFSQPVSGHWYL
                     TLKDDKAQVRCAMFKMKNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGE
                     GLLQQQFEQLKAKLSAQGLFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDP
                     SLSVVIYPALVQGKEATQDIVNMIELANRRNECDVLIVGRGGGSLEDLWCFNEESVAY
                     AIYHSQIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQNELKRQLQHQFDKV
                     NLAFDRVWNHKFNRFQQLPLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQ
                     VGKELNVRLIHQHPQKQIERQSQMLKQLELKLHWQMEQQLSKKQQKWKNITQRFERNP
                     LPYQLYQQQTMVAKMSQRLAYSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQ
                     TKDGKTLTSTENIERGEAIITQLKTGKIISQVVDFL"
     gene            17673..17758
                     /locus_tag="PXD69_000676"
     tRNA            17673..17758
                     /locus_tag="PXD69_000676"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17707..17709,aa:Leu,seq:caa)
     gene            17856..18680
                     /locus_tag="PXD69_000677"
     CDS             17856..18680
                     /locus_tag="PXD69_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDL6282899.1"
                     /translation="MKPLQNGTNKPFTITIASTKGGSAKSTNAANIGAFCAEHGLRTL
                     LIDTDTQPTLSSYYELEYQAPGGTYEFLHFKDVDPTHIISRTTIPNLDLIQSNDPSNK
                     ISPMLRDSPDGALRFSLLLQKIEGYDVIIIDTRGTRDITVDMSVLAADVLFCPILPHI
                     LSAKEFIRGTIGMYQDLETFTAFGFTLPPLKAMINCVDHTKDVKLVSDYLHTLFQNEF
                     DENKTLLEFSVPDRVAYREAATFSKPVYRQSQAEYETISQLCALLMPQFANSHFSA"
     gene            18692..20053
                     /gene="dnaB"
                     /locus_tag="PXD69_000678"
     CDS             18692..20053
                     /gene="dnaB"
                     /locus_tag="PXD69_000678"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL6282900.1"
                     /translation="MSSLNKSLVQPHSIEAEFSVIGGLLLDNELFDEVSSKINEGDFY
                     NFTHRLLFKHISELIEAGKPADILTLDQYLTQKKVIEDLGGFAYLAEIVKNTPSTANI
                     HAYTDIVLLYSKQRQLLKLGQFIVDQTQSAKTPDKFEAVVDDIEKKITEFSLSDNTKS
                     AADLSDIFANMLSRMELSAKNGDPVTGTPTGIQGIDEATTGGQPGDLIVIGARPSMGK
                     TAFSQTIAYHTLKKFESAPVFYHSMEMPADQILQRFLAMRARVGLQNIRQADSLDDEE
                     WSKLTSAMGYILEHWKNRLVIDDEGSLTPQKLRTKVRQNARKYGKPAAIFIDYIQLMQ
                     TSQRYENRNLEIANISRSLKLLAKEMDCPVYALSQLNRSVEQRANKRPINSDLRESGS
                     LEQDADVILFIYRDEVYDADSPFKGTAEIIIGKQRNGPLTSVMTNFRSEFALFENRTN
                     TTH"
     gene            20062..21708
                     /locus_tag="PXD69_000679"
     CDS             20062..21708
                     /locus_tag="PXD69_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL6282901.1"
                     /translation="MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPTHYSSDVEYITV
                     TLDKLRPYEHNPRKTRNPNFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQ
                     ALKELFTETKDPKFWSISCQYKPWQGDTADSVEAELNLLIGHLIENDTRADLSFIEKA
                     LGILQAKEYYEKKLGKSLSSRELSSELENDGYIISHALILKMERCVNYLYPHIPEVLF
                     SGLGHTQIDKLLAIRNNAEEVWAAHQFDTDVTFESLWSENLSKFNEATPFQAKEFQSE
                     LITAMVEALEGKVSFETLYLDIDLDEQKFKKIAAKQQEIDNLVEKTVDQINTRQEQQT
                     AKSEPLIKNENKAVTPQKAQHIIDEVIDDNESDDEQNNAITDLSQLGSSLLDNQDNQE
                     DYLSQIAHNFGLTPGMSIQEQREQRAEANGLTFACEGRQPVEDIWLIHPARQYRSEAY
                     SLALDIAESMGIDHLVEHIVKQPVDYTYAMKPADTELSPSALTLYSFLSMLQTAEHKD
                     ENSCVLDSKFLFELDDLTLVKIFRLIRVSRHIRQQGGEND"
     gene            21701..22258
                     /locus_tag="PXD69_000680"
     CDS             21701..22258
                     /locus_tag="PXD69_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2857 domain-containing protein"
                     /protein_id="HDL6282902.1"
                     /translation="MIKPITVNEALIGNALLNIKEGNIHPCLKMGFSEEQLKAINNLS
                     IDEIMDISNSVVSFAKVEINHETFWKLLAIAQANTQQRQIIDRALLLGASIEMLHQYF
                     GLSTSEVSARRQLLGIEEKMGRKAAASDEESTHIWEIWQRYKQRMEILDSQEGLELLC
                     LIAEEGNMNLTVVWKLVSEWYSKHK"
     gene            22417..23607
                     /locus_tag="PXD69_000681"
     CDS             22417..23607
                     /locus_tag="PXD69_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282903.1"
                     /translation="MFSSTNKPTEHGLLFFGNQHETVPTRLLQDPCLTPRAKFAWQLI
                     KCNVQAFQGGLFPSYETLSKMLSDRPYAEAKLSEKVVTQTLYLLRLTRWLTLCETVRD
                     ERGYVQGNVYILHDEPVPILDAIQLNSDYLSFLDKCTKHKDSLINGVANHIVESLITD
                     KTKWHYVSHLDCLQSRYQIYQQQQLVKDKQPSQTEQELSKIQQNILTSTMEVRDFDEE
                     VRKKSSKNQTSNKGVRAKNEDKSLILDLLPLGKSDVQYRTLYINKYCTGEPSEITWPQ
                     EIPLTSLEQKLTAQAMKGLDLGLCQAILLEVQQRIIQKQDVKKPKGYLYTLIQRAKQG
                     EFKPYYFELGKNLPSQNQANNNSAHSIQKLTEQPTEKPVLTSADREQMASRMQKFRAE
                     LLLQ"
     gene            23786..24544
                     /locus_tag="PXD69_000682"
     CDS             23786..24544
                     /locus_tag="PXD69_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03761 family integrating conjugative element
                     protein"
                     /protein_id="HDL6282904.1"
                     /translation="MTTQLDPQLGPLRSEITFTLHTQYAHKLWVGRPMIRNEEGKVTQ
                     SSIISVPNCFAMLTQIQRAASEDDPYADDYLIQFEESVINYRKEIQKLTNDIVTLYAK
                     MLPEGISIERCANISPISYPIYVNSQLGYQLLYLLGDFDSLCRSVMTAAHIAIINRAE
                     AQDWIEAGARLIRKCFGIVERYKSSGITRRDYQEKNARYQAAIKRMGYTLSDAVLTGE
                     HRAEFAPFIKQNTTVEEEQSVETHITAQTNESQK"
     gene            24553..25038
                     /locus_tag="PXD69_000683"
     CDS             24553..25038
                     /locus_tag="PXD69_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3158 family protein"
                     /protein_id="HDL6282905.1"
                     /translation="MNLISDEIYRQLVKDSGLNTSLKQLFSHFDTGSDYELLQEQFTQ
                     ARAYFMAAQDSMVQSVRQDLSPLAVYMIKDKASSSGGTFLRWRSMQNARTGGTVWQPI
                     VDDKSVPVEVRKKVVAVEKDRILINMQISVFNHILRQLADCAEKLKEVDNAVAKSDLN
                     S"
     gene            25394..25846
                     /gene="ssb"
                     /locus_tag="PXD69_000684"
     CDS             25394..25846
                     /gene="ssb"
                     /locus_tag="PXD69_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL6282906.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GERREVTEWHRIVFYRRYAEICGQYLRKGSKIYIEGKLRTRKWQDQNGQERYTTEIQG
                     ELLQMLDSRNATNSVDGQQSNYQAMSQSPKATHPQDLPMDNFDDDIPF"
     gene            26153..26341
                     /locus_tag="PXD69_000685"
     CDS             26153..26341
                     /locus_tag="PXD69_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282907.1"
                     /translation="MSYDANDALNEIEEALSELERVAEDLINNNPNKESELRGQGVHQ
                     ATKHLRFRIRNIRRGEAI"
     gene            26382..26684
                     /locus_tag="PXD69_000686"
     CDS             26382..26684
                     /locus_tag="PXD69_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282908.1"
                     /translation="MKIKLYFPDESIATIKRMGLRQMSPETLRWTADHPSSSYGMGAL
                     LRGKSGEILDGKSFAAMVHAFGAWIETDSEDTSRRVHNALVTAATGTEESVKVAKE"
     gene            26684..27994
                     /locus_tag="PXD69_000687"
     CDS             26684..27994
                     /locus_tag="PXD69_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HDL6282909.1"
                     /translation="MSNILNWPDYKVLQVSELEHDYQVHAEVSEPPTQCPHCNHPEIV
                     GFGRRDEVIMDTPVHGRRTGIMLNRRRYRCQSCRKTFLEPVPHKDEKRQMTNRLIQYI
                     ERESLRRTFSSVAEDVGVDEKTVRNIFNDYCERLEKTLNFEMPQWLGIDEIHIIKPRC
                     VITNIQQQTIVDMLDNRNKTTVTRYLSKRTDRDLVRYVAMDMWRPYRQAVETMIPDAT
                     VIIDKFHVVRMANESLERARKAIRSALTPQQRRGLMRDRFVLLKRRHELTDAEYMRFS
                     GWTLNYPEIGQAYELKEAFFEIWDCQTRHQAQEAYYSWLRQITPEMKAHYDPLIKAMG
                     NWHDDIFAYFDHPITNAYTESLNNLIRVVNRVGRGYSFEALRAKILFTEGFQKIKKPR
                     YQRQRIPEGAMGRMPFYGVAEAGPSTNYGADISTLVREIEAGRL"
     gene            complement(28090..29292)
                     /gene="tet(H)"
                     /locus_tag="PXD69_000688"
     CDS             complement(28090..29292)
                     /gene="tet(H)"
                     /locus_tag="PXD69_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(H)"
                     /protein_id="HDL6282910.1"
                     /translation="MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYG
                     VLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRI
                     IAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMP
                     FIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATY
                     FIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEK
                     TTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGK
                     LQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTT
                     PKAVISTP"
BASE COUNT         8897 a         5832 c         6166 g         8443 t
ORIGIN      
        1 atcaatctgt ttaaatgtaa caattatttt ttgttgtaaa ttatttggtt ttaagaagca
       61 aattatgtgt caattacttg gaatgaattg taatacgcca accgatatta ctttttcttt
      121 tgatggattt cgccgtcggg gtgggctgac ggatcaccat actgatgggt ttggaattgc
      181 cttttttgaa ggcaaagggg ttcgggtttt tcgtgataac cgcccgggag catcatcgcc
      241 gatggcagaa gcaatcagcc aatatcaaat taaatcgctc aatgttattg cacatattcg
      301 taaagctacg cgtggtgatg tgaatttgga aaatacccac cccttcattc gtgaattatg
      361 gggcgagaac tgggtgtttg cccataacgg cacagtggaa ggtgttgggg tatgcgagga
      421 gtgccactac cagccgattg gtacaaccga ttccgaagcg gcattttgcc gtattgtgtc
      481 ggaattaaaa gagatgtatc cggctaaacc aagcgaaaaa gagatttttg atgccgtggt
      541 gcaaatcacc tcaagaattg cggaacacgg ggtatttaat tttgttttat ccaacggtca
      601 ttggatgatt gcccgttgta caactaatct gcattacgtt tgccgtaaag caccgtttgg
      661 caaagccttg cgtgatgatg atgtgtcgat tgattttagt caatatacca aaattaccga
      721 taaagtgacg attattgcca ctcagccact taccaaaaat gaaaactgga ccaaaatgaa
      781 aaacggtggc tatgttttct ttaaagacgg cgatgtggta tatgaaattg aaggcacatt
      841 gccggaagct cagcctcacg tttaatcact aaaaaaccta gcttcggcta ggttttttct
      901 tagttttcac gcttaacaat aaaattagct aactctttta atgcggtggt atcgaaaggc
      961 aactgttcca gcgaatggag agcggtttga taaagcattt cggctttttg ttttgccccg
     1021 tctaagccca acaatttcgg gtatgtgctt ttatttaagt gttcatctga acccactatt
     1081 ttgccgattt tatctgtttc gccaatgaca tctaaaatat catcttgcac ctgaaaggct
     1141 aagccaatcg ctttggcata gtttacaagc ggttgtttta tggctacatt ttgcgaatat
     1201 tcggaaaggt ttaatcccat catcacggat gatagaatca atgccccggt tttgttgcga
     1261 tgaattaatt caagctcttc caagctcacc gctttatttt ccgcaatcaa atccaaactt
     1321 tgccctaagc acattccttt tgcaccggaa gcggttgcca attctgtaac ttgaacaact
     1381 ttttctcggt cggtcaaatg cggatcggtt gccagcagtt caaacgcaaa actttgtaac
     1441 gcatcaccgg ctaaaatagc ggtagcttca tcaaaggcaa tatggcaggt tggcttgcca
     1501 cggcgtaatc tatcatcgtc cattgccggt aaatcatcgt gaaccagcga gtaagcgtga
     1561 atagcctcca ttgccgccgc actatgatct aatttttcca acggcacacc aagcattctg
     1621 ccggtggcat agattaaaaa cggtcgcacc cgtttaccgc ctagcaatac cgcataagcc
     1681 attgcttcta ctaaaggcga accaacgcta tccgttgttt ttaatttttc agcgagaaaa
     1741 tggttaatcc gttgttgcag gtgagtcaga tcggttgcta atagatagct cattgtgatt
     1801 attctctttc gtaatcgcta agtggggcag tatcgttttt atttaataag atttgaatac
     1861 gttgctcggc tttttgtaac cgttcttgcc cttgttgcac taatttgatt gcagtttcaa
     1921 attcgttgag ggcttcttca agcggtaaat caccggattc caaatgggta acgattgctt
     1981 ctaattcttt aagtgtgctt tcaaaatctt gagtgggttt ctttgccatt gttgctgacc
     2041 tattgctgta aaagttgctc aagtttaccg ttctcacaag ggatttgcaa attcctttta
     2101 cttttcgacc gcttgcaggt attgttatcc tatttccaaa tggaggattt tctatgcaag
     2161 ttaccgagct caatatttac ccgataaaat caactcaagc tattcaagtt tcacaggcat
     2221 ttgttgaacc gaaaggctta aattttgacc gtgaatttat gctagccgag cctaacggca
     2281 aatttattac tgcccgtaaa gatccggaat tataccgtct agcggctttc ccgattgcga
     2341 caggggtaat gattacccat acaagcggtc aaaaatgcgt tgcactttac caagattttg
     2401 tggaagagca gagtagtgaa gtgtggggaa cacattttaa tgccaaagtg gcggcagaag
     2461 cggtcaatca atggctgagt gaaatttttg gtagggctgt gcaactacgt tggcttggct
     2521 cgcaaagcca acgaattgtt gcgaattttg ccgatcaccc aatgagtttt gcagatagca
     2581 acccggtgag tttgatgtct ctaaaatcgc ttgagcaagt gcaacaatgg tcgccgattc
     2641 cactcgaaat ggctcgtttt cgcccgaata ttgtgattga tggcaatgtg gcatttgaag
     2701 aagagcagtg gcaacaagtt caaattggcg aagtgctatt taccaaagcg gcattatgta
     2761 ctcgttgcat tttgattaca cgggatttaa acacgcttga gttagacccc aaatcggagc
     2821 cgtttagaac cttaaaagaa aagcattgcg atgaaaaagg taagccggtg ttcggtattc
     2881 accttgtgcc acaaaacagt ggtgtgataa aagtaggcga tcctgtcatt attcaattat
     2941 aatatgccga tattttttta aaaggagatt caaaatgtac caacgcagtc aatcaagaac
     3001 tgtgctattt ccaatcctac tatttgttgg gattaattta gttatcctca ccttatcccg
     3061 tttagtgtta ggcgtttggc aatctgatcg agtatccgct gttgatggat ggataccatt
     3121 aatactacaa ggtattcgca ttgatatatc ttcgctatgt tggctatttg gcttaccggc
     3181 attatttagc gtgttgtgtt ttcataaaaa tgtactgggt tcgatttggc agactgtttt
     3241 aagaatttgg ctaactgtcg gtagtgtatt tattcttttt atggaagtcg ccacaccgaa
     3301 ttttattgaa acctttgacc ttcgcccaaa tcgtcttttc attgagtatt tggtccatcc
     3361 gagagaagtg ttcacaatgc tgattaacgg acatttatgg gctgttattt gtgggattgg
     3421 cattgcgatg atttctctca tcatttattg gaaattatcg ggttgggcaa ccaaaaattt
     3481 gcatttcccg agctggaaaa tgcgtccgct actggcttta ttggttgctg caatagtttt
     3541 tgttggtggg cgttccagtt ttgcccatcg agggattaat ccggcaatgg tggcattttc
     3601 aagcgatccg cttgtcaatt cactggtgct aaattcaggt tattccgtgc tttatgcggt
     3661 tcagcaattg aaagatgaag ataaatcttc cgaacagtat ggaaaaatgt ctgtggagga
     3721 aatgttcaac attgttaagc aggttcgtaa tcgaccagct tcagattata tttcagatga
     3781 aattcccacc ctcacgcaaa ataaagcgac ttatcaagga aagcctaaaa acattgtgat
     3841 tatcttagaa gaaagtttag gggctcaatt tgtcggttcg ctaggaggga aaaatctcac
     3901 tccaaattta gataaacttt cagaacaagg ctggtatttt accaatcttt atgcaacagg
     3961 tactcgttcg gtgagaggaa ttgaagcggt aacggctggt tttacaccaa caccggcaag
     4021 atctgtggta aaactgacga aaagccaaac taactttttt agtattgccg aattattaaa
     4081 acgtcaagga taccatactt cctttattta tggtggggag aagcattttg ataatatggc
     4141 gagctttttc tacggtaatg gtttccagca aattatcgat gaaaaagatt ataaaaaccc
     4201 taaatttacc gcaacttggg gcgtgagtga tgaagatctg tttgataagg caaatgaaac
     4261 ttttaatcaa ctgcacaaat caggtaaacc gttttttagt ttggtattca gttccagtaa
     4321 ccacgatccg tttgaatttc cggacggcaa aattgaactc tatgaacaac cgaagcagac
     4381 tcgccataat gcggcaaaat atgccgatta tgctatcggg catttctttg agttagcgaa
     4441 aaaatcagag tactggcaag atacggtgtt tttagtgatt gcagatcacg attcaagagc
     4501 cgttggcgag catttagtgc caattcaaca cttccatatt ccggcacttt tattaggcga
     4561 acacattcag ccaagaacgg ataaccgttt agtgagtcag ctcgatatgc cgacaacatt
     4621 actttctgtg gcgggaataa gtggtcaata tccgatgata gggtatgatt taacgcaaga
     4681 cattgaccca aaccgtgcct ttatgcaata tgatgcgaca caggcgatga tgcggggaaa
     4741 tgatgtggtg gtaatgcgac caaatttacc gatagaagga tttagctacg ataaagctaa
     4801 ctataaactc acccctaaag aacagccgga atcgtttaaa aaagaggcgt tagcacacgc
     4861 attgcttggc agttatttat ataaaaatca gttatataaa ttaccggaag aaactaagca
     4921 gtaaggcaaa ttaaaagaga gggctgcaat atttttatta aaaatgaccg cttgccctct
     4981 ctcaaatttg ttcattactt taagaataat gctgctgcac cacgagtgcc acctgagtcg
     5041 ccgtgaattg cttttttgat gaccggcact ttcgctgaac gcattaagtg ttttggtaat
     5101 gcttttggta gagcttggta gatataatca aagttggata aaccgccacc gaatacaatc
     5161 atatccggat ctaaaatcgt aatcagattg ctgatactga ttgccattag ctcaatatat
     5221 ttttcgacaa atgccaccac tttggtttct tgttggtaga agcgttcgat aatcgctttc
     5281 gccgagattt tttctcctac taaatcatta aacagtaact caaaaccccg ccctgaaata
     5341 taggtgtcta aacaggcttg gttgccacaa ccacattcat aaattggggc tttatcccag
     5401 tcgagcaatt taagtgcgtg gtagttaagt tgcatatgcc caacttcgcc tgccattccg
     5461 attctgcctg aatgaatttt accgtcaaac acaaaaccac cgccaaaacc ggtgccgata
     5521 atcaacccta atacggtgga ataaggctta ttactttcgt cccacgcttc agacagggca
     5581 aagcagttag catcgttttc ggcacgcact tcacgcccta aacattcggc taaatctttc
     5641 agaatcgttt tgccgtcagc cactcgaata ttggtaattt ccgcaatgcc ggtttcacgg
     5701 tttacaaagc ccggaatgcc cagcccgaca gtgccttttt cgtcaaattt tgtatcggca
     5761 gtctcaacca gcgttttaat tgccgtcagc caatcttgat aatttgtctg cggtgtcggc
     5821 acacgttcgc tgtgtagttt ttctagtttt tcattaaaag cggctaattc aatttttgtg
     5881 ccgcccacat ctaagccata ataaattgcc ataattacgc tctcttattg cgattgattg
     5941 attttatgcg gtttataaat tgctaaatca ttaatccatt tcttcattga tttttgctgg
     6001 gttttcgtat tcgcaaaatt aaaagttttc cgtttattat taaatttggt gccaagtaga
     6061 atgactttcg tttcactttc ggaaacttca tacaagaagt aaacattatc aatgacgata
     6121 tatttgtaac cggtatcgcc ccaaaaaggt ctgatgttgg gtaaattagt gagaatttta
     6181 tgcaggaaat cgagttcttc ttgagtaaga taagacttaa tgaagtgttt caataagcct
     6241 ttctctaagt ttgggtcttt tggttctgca ataaaaactt gatacatagc aagcctattt
     6301 tttgaagtca aaaggttgaa tagtgttatt taagattgcc tcccaagtat cagcactagc
     6361 ctgggcggca aattgtcttt cctcaatact aaacggatag tcatcttttt ctttatcgct
     6421 taatagttca gctatttttt ctatcgacat ttccattcta agctccttat tttaggtact
     6481 tattcaataa tttgtattgt atattgattt ggctaaattg ccaattaagg ctttttagca
     6541 aaccattttt tactttccaa ccaaggcaca aaccacacaa ataaggctaa attgattaga
     6601 aacgcaatta aactactggt gaataaatca atcgggtagt gcatacctaa acgcaagcgg
     6661 ctaatcagca ttaacgccgc ccaactgatt gcaaaaaaat gagccaaaac gaccgcttgt
     6721 cctcgcatat tacggcagaa acctaccacc aataatagcc aagaaaccgc aaaaatagtg
     6781 tggcctgatg ggaaagaata gcccacttct ttggcttggt gagcggtaac aaaattttga
     6841 tttgcaccga ttttttccat tacggcaagc ccacgttgct cgcgtgttaa ttgataaaaa
     6901 tcgtctgttt tatcttggaa aagagcagtg acaaatggac gaggctcttg aaaggttgat
     6961 ttcatcgctg ttttgattgc ttgagtggct accattgaag cgacacacac ggtaatcaca
     7021 aaaattaaag agtagcgttt gcgaaccacc ctcgccagta ataaggcgaa aaccacacag
     7081 gtgatgatgg cataaggtac ggagccggtt tcggtgatta aatataaaaa gtagtcgaaa
     7141 tcaaattcag cgtattgaat tgccagagac cagtgccaat ttgccagcca agtcaccaca
     7201 ggaatgagca acattgcaag ggtataaaga gagaattttt taaacataga aagtcctata
     7261 aaaaaccgct tgaatacaag cggttgaatt taaacatatt tttgcaatta gatcgcttta
     7321 gttgcttttg gcaagctgat ttttttctct tcgctttggc ggtaaagcac taaaatgtgc
     7381 ccaatggttt gtacttcagc cgctttagtt tcacgcagaa tggcatcaat aattaattgt
     7441 ttggtttcac gatcagcccc ggcaacttta actttaatca gttcgtggtg gtctaaggcg
     7501 ttatcgattt cagctaacac gccttctgtt aagccgttac cccccagcat caccactggg
     7561 cttaaatgat gagccaagcc ttttaggaat tgtttttgtt tggttgttaa tgtaattgac
     7621 attctttttc cgttaatttg ttttgttgat aaaatttggc gtagaaaata gcacaaaaac
     7681 cactattttt aaagtaaaat gcaacgaata gcagaaaaac acacgacaaa aagagagaag
     7741 gataaactat gccgacatta agtgttgcga tgattgtcaa aaatgaagct caagatttac
     7801 gggcttgcct tgacacagta aaagattggg tagatgaaat tgtgatttta gatagtggca
     7861 gtactgatga aacaccacaa attgctgctg aatacaacgc aaggttctac actaacaccg
     7921 attggcaagg ctttggtaaa cagcgtcagt tagctcaaca atatgtgacc agtgattatg
     7981 tactttggct tgatgcagat gagcgagtga cagccgaact gaagcaatct attttacaag
     8041 cggtcaaaaa tgatgaaaaa aataccgttt acaaaatcag ccgcttaagt gaagtatttg
     8101 gcaaacaaat tcgccactcg ggttggtatc cggattgtgt ggtgagattg tatcgcacgg
     8161 aatttgccaa atatggtgat gaattggttc acgaaaaagt acattaccca aaagaggcaa
     8221 aaatccagaa actacaaggc gatttgctgc atttcaccta taaagatatt caccactatt
     8281 tggtaaaatc ggcaagttac gctaaagcgt gggcaatcca acgggcaaat gcaggcaaaa
     8341 cagccagctt atttgatggc gtgactcacg ccatcggctg ttttgtgaaa atgtatctat
     8401 taaaagccgg ttttttagat ggcaagcaag gatttttatt ggcagttctt tcggcacatt
     8461 ctactttcgt aaaatatgcg gatttgtgga atcgtactcg gaaatgatgc ttttcagtac
     8521 tctctccctc tagtgggaga gagatagata aaattgcgtt tagcaatttt atcagagaga
     8581 gggagtattc cacattctcc gaataaacgg tactatcgtt tttaatgcct cagaaataga
     8641 aattaaagtt aaattcattt gtgaggcttt atcagacggt gggcaaaatg caatgtgttt
     8701 attcgcatca ttaatcggtt tccaacggcg tggaatggca gaaagtcggc tcgggtagaa
     8761 gccaatagtt ggaatattta acgccccact aatatgtaac ggaccggttg agccggcaat
     8821 aaacaaatct gcacacgcaa gcgaatgtgt aaaatcttgt aacccctcat ttttatcata
     8881 aaccaccacg ttgttgtgat tgatttgttg agctaactgc tgagcttttt cgctttcgcc
     8941 tttccctgcg gtgagtacca catagcaatc aaattctgcc aaaatacctt gaattaactc
     9001 tgcatactgt tctatagata aattatttgc cgaaccaccg gttgaactat gcacaaatac
     9061 ccacttttta acggtggtaa tattgagttg ttcgcataat tttgcttttt gtgcctggac
     9121 ggtttgctgt tcaacactta agtatggcgt gtgaggttca acaatcggta tattgtgttt
     9181 gcttaaaaaa gcacgggcta aatccaaatt atattcggat tccgcttttg ctgattgaga
     9241 acggcgttgg gttaaacggt ggttatataa aaattggaat aatttagttg ctggagcgag
     9301 gcggtattta atcccacttt gccaggtgag tttggcatta tgccagtctg aaacaaaaca
     9361 aataaccgca tcaaattgct catttttaac cgcttgtaaa atacggttaa attcattttt
     9421 atctttttta ttcgccgtat caataataat cttatcaata gaagggcaaa gctcggcaag
     9481 tggagcagta taacttggca caagagcggt aatttccaca ttcggcattg attgcttcaa
     9541 catagcaaat gccggaaagc agaccataaa gtccccaatt ttatcattac ggattacgag
     9601 tagttttttc attctgattt tctctattgc ttttaggttt tcagtaaatt ataagcggtc
     9661 aaatttcaca aaaaatttgc aaatcatcgg gctaaatttt agatgaattt ttactacttt
     9721 tcagctagaa tattttgctt gaacgtaagc gtttgcgttt gaatattttt actttcaaaa
     9781 tttataggaa ttcgtatgtc agcaacaatt ttagaagctt tacctttagg gcagaaagtg
     9841 ggtatcgcct tttcaggcgg tttagatacc tcagcagcac tgttatggat gcgtaaaaaa
     9901 ggggcagtgc cttatgcgta caccgcaaat ttaggtcagc cggatgaaga tgattacaac
     9961 gcaattccga aaaaagcgat ggaatatggg gctgaaaatg cacgattaat cgactgtcgc
    10021 caacagttag ctcacgaagg cattgccgca attcaatgcg gtgctttcca tatttcaacc
    10081 ggcggtattc cgtatttcaa caccacgcca cttggtcgtg cggtaaccgg cacaatgttg
    10141 gttgcggcaa tgaaagaaga tgatgtgaat atctggggcg atggttcaac ctttaaaggt
    10201 aacgatattg agcgtttcta tcgttacggt ttattaacca atccaaaatt aaaaatttat
    10261 aagccgtggt tagaccaact attcattgat gaattaggcg gtcgcttgga aatgtctaaa
    10321 ttcttaatcg aaaacggttt tgactataaa atgtcggtgg aaaaagccta ctctacagac
    10381 tcgaatatgt taggtgcaac ccacgaagcg aaagatttag aagaattaag caccggtatg
    10441 aagatcgtaa aaccgattat gggcgtggca ttctgggacg aatcagttga aattaaagcg
    10501 gaaactgttt ctgttacctt tgaagaaggt gtgccggtgg cgttaaacgg taaacgtatt
    10561 gatgatgccg ttgaattaat tatggaggct aaccgcattg gtggcagaca tggtttggga
    10621 atgtcagacc aaatcgaaaa ccgtattatc gaagcgaaat ctcgtggtat ttatgaagca
    10681 ccgggaatgg cattattaca catcgcttac gagcgtttag ttaccggtat tcacaacgaa
    10741 gatacgattg agcaatatcg cattaacgga ttacgtttag ggcgtttatt gtatcaaggc
    10801 cgctggtttg acccgcaagc tttaatgttg cgtgaaacgg ctcaacgttg ggtggcaaaa
    10861 gcgattaccg gtacggtcac gcttgagtta cgccgtggta acgatttcac tattcttaac
    10921 actgaatcgc caaacttaac ctacgaagca gaacgtttaa gtatggaaaa agtagaagat
    10981 gcaccgttta cgccggcaga tcgtatcggt caattaacaa tgcgtaactt agatattgtc
    11041 gatacccgtg gtaaattagc agtttatacc gatgcaggtt tattggcggc taataatagc
    11101 gtgattccac aacttggaaa aaaataatca gttgatctcc attctgataa cttttagaat
    11161 ttagcctaaa agctgcccca aagttaatgc tttggggctt ttattttcaa agcgtgatga
    11221 tgaaattagt tgaaattttt acagacggtt cttgtttagg caaccccggc aaagggggga
    11281 ttggtatttt gctgcgttat aacgggtacg aaaaaaccgt gagcaaaggc tattttcaaa
    11341 ccaccaataa ccgaatggaa ttgcgggcgg tgattgaggc tttagcaatg ctaaaagagc
    11401 cttgtaaggt gcaactcaat agtgacagcc aatatatgaa aaacgggatc caaaaatgga
    11461 tttttaactg gaagaaaaat gactggaaaa ccagcgataa aaagccagtt aaaaataaag
    11521 atttatgggt tgctttagac caagaaattc aacgccacca aattgaatgg agttgggtga
    11581 aagggcattc aggacatcgt gaaaatgaga tttgcgatga gctggctaaa caaggagcaa
    11641 ataatccaac gttggacgat gttggttata ttgcagacta ggttttacaa gcggtcggat
    11701 tgtgtaaatt ttttaccgaa tttaaccgct tgtatttgca taaagcactt atttttagcg
    11761 aaatagtgct acgcaaacgt tttctttttt tgtagaatag gagagcttta cgctttaagg
    11821 tgtgttatgg ttgatttaat tgttatcgga atcattgctt tttcagtgct tatcagttta
    11881 tggcgaggtt ttaccaatga agcattatcg ctacttggtt gggtaatcgc cttttttgtg
    11941 gcaagctcgt tttatcctta tttaagcggt tatctcacac aaattaattc ggtttatttg
    12001 caaaattcag aatttttacg caatggtatt gcagcggcga ttctgttcat tttgacttta
    12061 attgtttgtg gtgtgatcaa cggtttatta ggcaaagtga ttgatttgag cggaatgtct
    12121 atcaccgacc gtattttagg cggtgctttt ggggcattgc gtggtatttt aattgtgtcg
    12181 gctattttat ttttcttaga tacctttacc caagcaagcc aaacggaatt atggaaatca
    12241 tcgctattaa ttccgcattt tgactttatt gtgaagtggt tctttgaaca gttacaagca
    12301 aattccagtt ttttaaacac gactaaataa agaggttttt ctatatgtgc ggcattgtcg
    12361 gtattattgg gaattcgccg gtgaatcagg cgatttatga tggtttaaca ttacttcaac
    12421 accgaggaca agatgccgca ggtatcgtca ccatagacga tgaaaatcgt ttccgcttac
    12481 gcaaagctaa cggcttagtc agcgatgttt tccagcaaga gcatatggtg agattacaag
    12541 gcaatgttgg aattggtcac gttcgctacc caacagcagg tagctcaagt gtgtctgaag
    12601 cccagccatt ttatgtcaat tcacctttcg gtattacctt agttcacaac ggtaatttaa
    12661 ctaataatgc ggaacttaaa gctcgcttat acaacgaagc ccgccgccat gtgaacacta
    12721 attctgattc tgaatccctt cttaatattt ttgcttactt tttagatctc tattccactc
    12781 agcatttaag cccagacaat atctttgaaa cggttcgtaa aaccaatgat agcattcgtg
    12841 gtgcttatgc ttgcattgcg atgattatcg gacacggtat ggttgctttc cgtgacccat
    12901 tcggtattcg cccgttagtg ctgggtaaac gtgaaatcga gggtaaaacc gaatatatgt
    12961 ttgcttcgga aagtgtggct cttgatgtag tggggtttga atttgtgcga gatgtgctgc
    13021 cgggtgaagc gatttatgtt acctttgatg ggcaattaca ttcgcaaatt tgtgccgata
    13081 atccaaaact gaatccttgt atttttgaat atgtttattt tgcccgtcct gattccgtca
    13141 ttgatggcgt ttctgtatat tctgcacgag tgcatatggg cgaattatta ggtgagaaaa
    13201 ttaaacgtga atggggacga attatcgatg atattgatgt ggtgatcccg attcctgaaa
    13261 cctcaaatga tattgcggta cgtattgcta atatgttgta taaaccctat cgtcaagggt
    13321 ttgttaaaaa ccgctatgta gctcgaactt ttattatgcc ggggcaagca cagcgtaaaa
    13381 gctcggttcg ccgtaaatta aatgcgattg cctctgaatt taaaggcaaa agcgtgttac
    13441 tggttgatga ttctattgta cgaggtacaa cgtctgaaca aatcgtggaa atggcacgag
    13501 cagctggtgc aaaacgggtt tattttgcct ctgccgcacc ggaaattcgc tacccgaatg
    13561 tgtatggcat tgatatgccg acttgtgaag aattagtggc ttatgatcgc tcagtggaag
    13621 aggttgcaca gatgataggg gtggataaat tgattttcca agaccttgaa gcactttata
    13681 agtctattca actggaaaat ccgactattc atcgctttga tgactctgta tttacaggag
    13741 aatatattac aggtgatgta gataaatgct atttagacag tatagcaaga tctcgaaacg
    13801 ataaagcaaa agcagaggcg gcaaaacaag ccaccaattt agaaattcat aacgaaagat
    13861 aaaagaaact cgcagtgaaa actgcgagtt ttttactatt gatttttctt agtgagtgca
    13921 ttttccatac ttttataaat ctctttatat ctaggtttaa atgtatcgca tttttcggga
    13981 tctacatttg ctttttggtg atttaaacga gaatgcagta aatggaaata ctcggtagaa
    14041 agcgtatcat tttgcatcag tttctgattt tcctctccga gcaactcttt tagaagctga
    14101 tattcaaaat attgcatcgt taaattttca gccagattcc aatttgcgta gatttgctgg
    14161 taaccgggtt tagctaactc aggatagata cattgctcaa tattattgag ctggcgtatc
    14221 aaaattctga catctatttc tgagatttta tatttaggct cagttgaagc ggttatattt
    14281 tgcaaattat ttgcaagcac ggcgctcggt agaagtaaga atatggcaga tagttttttt
    14341 aacatagtta ccctgtatta atttaatacc caaacacggc cgtaatgttt cattaaacct
    14401 gcgatatggc ctgctttatc gccaatccct tgatataaat cgaagtgatg gcctttcact
    14461 gcaccgccaa catcaagagc caccattaaa cgcatttcgt gtttgccggt ccaatttcct
    14521 ttgctatcaa tcaacggcat ttcgaccaac aacacgctac ctgatggcac aatgctacga
    14581 tctgatgcaa cagatgcaag tggtactaac ggcacaccgg cagagccttt tacctgaccg
    14641 gtaggatcgt ttttaaagaa aacatacgat ggattacgct ccaacaaacc ttgaacacgg
    14701 ctagggttac gttgccccca ttcacggata gcctgcactg acattttctc tttcggaatt
    14761 tcgccatctt ctactaataa acgcccaacg ctggcatatt taaagccatt ttgccctgca
    14821 taagcaaaat agtttaagcg accatcacca aagtcaacgt aaccgctacc ttgaacacct
    14881 aataagaagt tatcgagcat tgaattacta taagccagtt ctaagccctg accttgcaat
    14941 gctcctgcgt aaatttccgc ccgtgaaaaa cgtttgctag acggcatcgc ataaatcggg
    15001 tgttggtatt gcccctgagg cgttctacgg gctttgataa ccggcgagta ataccctgtc
    15061 attaacacat tctggtagcc atcttcgcca cgcattaaac gagtactaat accatatttt
    15121 gctaaatcat taatattacc gcccgatgag atccaacgac tgatttttcc gtaagcgata
    15181 gcataagaat ctgccaagct actataggct ctgacattag aaagctgctg taaaaagtct
    15241 agttgattaa caggagcagc atttaatcct aaacgtccag cttgaaaatg tgtgccataa
    15301 ggcataaagt gacgaccatt atattttgct ccaaatttag ctttttccgc atcataagag
    15361 gttgttttgc ctttttggcc tgaagacgaa cacgccacta ataccgttgc aatcgctacc
    15421 acgctagctg ccgcaatagc ttttttatat gctttccaat tcatcgaata tccttatatc
    15481 gttaataaaa tgtgaaaaat aaacagaaga atagcaaaaa cagcgacaaa ataaaaccag
    15541 aatataattt gattgttttt acaacaataa gcgtattttg atactatatc tgttgtaatt
    15601 tacatcactt agagcaattt tgtatgattt tacttgtcat tatgtcaaat tgatatatta
    15661 tagcctcatc agacgcgggg tggagcagct tggtagctcg tcgggctcat aacccgaagg
    15721 tcgctggttc aaatccggcc cccgcaacca cattccaaac cctcgatagt gaatcacatc
    15781 gagggttttc gttttatttg ccaaaaaaca gcaaaaaata accgcttgtt gactgcaaaa
    15841 gcttcctctc gctttcattt ctcgttacac ttctactaca tttacgcttt tttgattatt
    15901 atgagcaata ttttaactgt tacccaactc aactattccg tccgccattt gctcgaaatg
    15961 gaaatgagcc atatttggct aaccggcgaa atctcaaatt tcagccaacc agtttcgggg
    16021 cattggtatc tcactttaaa agatgacaaa gcacaagtgc gttgtgcgat gtttaaaatg
    16081 aaaaatgtaa gagtgaattt tcgcccacaa aacggtatgc aggtgctggt gcgggcaagt
    16141 gttacactct atgagccacg aggtgactat cagctcatta ttgagagtat gcaaccggcg
    16201 ggcgaaggct tgttacagca gcaatttgag caacttaaag caaaactttc agctcaaggc
    16261 ttgtttgctc aagagcataa aaagccaatt cctacttttg ttaaaaccgt tggtattatt
    16321 acctcctcaa gcggagccgc attacaagat attttacata ttttgcaacg acgagatccg
    16381 agcttatcag tggttattta cccggctctc gtgcaaggca aagaagcaac gcaagatatt
    16441 gtgaatatga ttgaactggc aaaccgccgc aatgagtgtg atgtattaat tgtcgggcga
    16501 ggtggcggtt cattagagga tttatggtgt ttcaacgaag agagtgtcgc ttatgccatt
    16561 tatcattcac aaatcccgat tatcagtgcg gtgggacacg aaaccgatgt gaccattgct
    16621 gattttgttg cagatttgcg cgcaccaacg ccttcggctg ctgcggaatt agtcagcaga
    16681 gatcaaaatg aattgaaacg ccaattacaa catcagtttg ataaagtgaa tttagccttt
    16741 gaccgagttt ggaaccataa atttaaccgt ttccaacaac tccccttacg cctgaatgct
    16801 cagcatccaa gcaaacaaat tcaatcgcaa cagcaacgtt ttgattatat ggaataccgc
    16861 ctcgagcagg caatttatgc acttgttgca gccaaaaagc aggtggggaa agagctaaat
    16921 gtccgtttaa ttcaccaaca tccgcaaaag cagattgaac gccaatccca aatgcttaag
    16981 caattggagc tgaaactcca ttggcaaatg gagcagcaac tcagcaaaaa acagcaaaaa
    17041 tggaaaaaca ttacgcaacg gtttgaacgc aacccgctac cttatcaact ttatcagcaa
    17101 caaacgatgg tggcaaaaat gtcgcaacgc ttggcttatt ctatcgaaaa aataatgctg
    17161 aaagagcagc gacattttca agagttatgc actaaacttg atggacttag cccattgaaa
    17221 atcttgacca gaggctactc aattacccaa actaaagacg gtaaaacgct tacttcaaca
    17281 gaaaatattg aacgtggtga ggctattatc acccaactaa aaacaggaaa aataataagt
    17341 caagtagtgg attttttgta ggggaaattt tgaacgctgc caatttttaa aattatttat
    17401 agtaaaatca gtaggttaaa tatttataaa cagggttgtt cacttagtta tccacaggtg
    17461 atgtgcataa ctatttttgt aaagatgaat tgagtgctga tttttaaatc aaccgatttc
    17521 aaaaggcatt tttacgcttg cacaagcggt catatttccc tataatcgtg caaaaattaa
    17581 gccagtgtgg cgaaatcggt agacgcagcg gattcaaaat cttatgcgta aactgatagg
    17641 acatacaggc gattgaataa aaagcactct tagcctgagt gatgaaattg gtagacatga
    17701 cggattcaaa atccgttggt gaataaccgt gtcggttcga gtccgacctc aggcaccatt
    17761 tgaatcacac ttgtagtttc tctctttcaa ataatcaatt caaatacacc gtattaatgg
    17821 ccaatactcc ttaacccttg ttaagagagt aaattatgaa accattacaa aacggtacaa
    17881 acaaaccttt taccattact attgcttcaa ctaaaggtgg ctctgccaag agtacgaatg
    17941 ctgctaacat tggtgcattc tgtgcagaac acggtctaag aacccttctt attgataccg
    18001 atacccaacc cacattaagc tcttattatg agttggaata tcaagctccc ggtggaactt
    18061 acgaatttct gcattttaaa gatgtagatc ctacccacat tatttctaga acgactatcc
    18121 caaatcttga cttgatccag tctaatgacc cgtcaaataa aatcagccca atgctgagag
    18181 attcacctga cggtgcatta cgttttagtt tactgctcca gaaaattgaa ggttacgatg
    18241 tcatcattat tgacactcgt ggtaccagag atattactgt cgatatgtct gtattggcag
    18301 cagatgtttt attctgtcct attcttcccc acattttatc tgctaaggag tttattcgtg
    18361 gcacgattgg aatgtatcaa gacctcgaaa cctttacggc atttggcttt accctaccac
    18421 cgctgaaagc gatgattaac tgtgttgatc acactaaaga tgtcaaattg gtttccgact
    18481 accttcatac tctcttccaa aatgagtttg atgaaaacaa aacattgctg gaattttcgg
    18541 tacctgaccg cgtggcatat cgtgaagcgg caactttttc aaaaccggtc tatcgtcaga
    18601 gccaagctga atatgaaacg atcagtcagc tttgtgcgtt actgatgcca cagtttgcaa
    18661 actctcactt ctcagcatag agggagaatg tatgtctagc ttaaataaat cacttgtaca
    18721 gccgcattct atagaggctg aattttcagt aatcggtgga ttactcttgg ataatgaact
    18781 ctttgatgaa gtgagtagca aaatcaatga gggggatttt tataatttta ctcaccgtct
    18841 actgtttaag catatttccg aattgattga agccggtaaa ccagcagata tattgacatt
    18901 ggatcaatac cttacccaga aaaaagtgat cgaggatttg ggcggatttg cttatcttgc
    18961 agaaatagtc aaaaacactc catctacagc taatatccac gcttatacgg atatcgttct
    19021 cttatatagt aaacagcgac agcttttaaa actggggcag tttattgttg atcagacaca
    19081 gagtgcgaaa acgccagata agtttgaagc tgttgttgat gacattgaga aaaaaattac
    19141 tgagtttagc ctatcagata atacaaaatc tgcagcagat ttaagtgata tttttgccaa
    19201 tatgctctct cgtatggaac tctcggctaa aaatggagat cctgtgacag gtactccaac
    19261 tggtattcaa ggtattgacg aagcgacaac aggtggacag ccaggcgatt taatcgtgat
    19321 tggtgcccgc ccttctatgg gaaaaaccgc attttctcaa actatcgctt accatacact
    19381 taaaaaattc gagtcggctc ctgtgttcta tcacagcatg gaaatgccgg cagatcagat
    19441 tttacaacgt tttctagcta tgcgtgccag agtgggattg caaaatatta gacaggcaga
    19501 cagtttggat gatgaggaat ggtcaaaact aacctcagca atgggctata tcctagaaca
    19561 ttggaaaaat cgtttagtta ttgatgatga aggtagtctc acgcctcaaa aattacgcac
    19621 taaagttcga caaaatgctc gtaaatatgg caaaccggca gctattttca ttgattacat
    19681 tcagttaatg caaacctcgc aacgttatga aaatcgcaat ttagaaattg ccaacatctc
    19741 tcgttcactc aaattactgg caaaagagat ggattgtccg gtttatgccc tctctcagct
    19801 gaaccggtct gtggaacaac gtgccaataa acgcccgatc aactctgatt tacgggaatc
    19861 cggctcactt gagcaagatg ccgatgtcat tttattcatc taccgagatg aagtttatga
    19921 tgcggattct ccgtttaaag gcactgctga aatcattatc ggcaagcaaa gaaacggacc
    19981 acttacttcc gtaatgacga atttcagaag tgaatttgcc ctatttgaaa acagaacaaa
    20041 cacaacgcat taggatagat tatgacaaaa gatgaaaaaa gactggcagc gatagcaaaa
    20101 ggattaaatg tttcacctat ttcaaatacg gctccatcct accaaacagc cacaccaacg
    20161 cattacagta gcgatgttga atatattaca gtaacgctgg ataagttgcg tccgtatgag
    20221 cataaccctc ggaaaacccg taaccctaac tttgagatga tcaaagagtc tattcgtcgt
    20281 cgagggttag atcataagcc gaatatcacc cgtcgtccgg gagaagattt ctatattatc
    20341 gctgacggtg gtaatactcg tattcaggca ctcaaggagc tctttaccga gaccaaagat
    20401 ccaaaatttt ggtccatcag ttgtcaatat aaaccttggc aaggtgatac tgccgacagt
    20461 gtcgaagctg aactcaattt acttatcggg catttgattg aaaatgatac ccgtgcggat
    20521 ttgtcattta ttgaaaaagc attggggatt ttgcaggcga aggagtatta cgagaaaaaa
    20581 ttaggtaagt ctctttcttc gagagagtta tcttctgagt tagaaaatga tggatatatt
    20641 atctctcatg ctctcattct taaaatggaa cgttgtgtta attacttata tccacatata
    20701 ccagaagttc tttttagtgg tcttggtcat acacagatcg ataaactatt agctattcgt
    20761 aataatgctg aagaggtatg ggcagcccat caatttgata ctgatgttac ttttgaatcg
    20821 ctctggtcag aaaatttatc caaatttaat gaggctacac catttcaagc aaaagaattc
    20881 caaagtgaat tgattacggc aatggttgaa gctttagagg gtaaagtgag ttttgaaaca
    20941 ctttatctgg atattgactt agatgaacaa aaattcaaaa aaatagcggc taaacaacaa
    21001 gaaattgata atttagttga aaaaacagtc gatcaaatca ataccagaca ggaacaacaa
    21061 actgcaaaat ctgaacctct catcaaaaat gaaaataaag ccgttactcc ccaaaaagct
    21121 caacatatta ttgatgaggt aattgatgat aacgaaagtg atgatgagca gaataacgct
    21181 attactgatt tatctcagct tggctcttca ttgctcgata accaagataa tcaagaagat
    21241 tatctatccc aaattgccca taactttgga ctcactccgg gaatgagtat tcaagaacag
    21301 cgagagcaac gagctgaagc gaatggactg acttttgctt gtgaaggtcg ccaaccggtt
    21361 gaagatattt ggttgattca ccccgcacgt caatatcgct cagaggccta ctcactggcc
    21421 ttagatattg ccgaaagtat gggcattgac catctggttg aacatattgt gaaacaacca
    21481 gtggattaca cttatgcaat gaaaccggca gatactgaac tttcaccgtc tgctttaaca
    21541 ctctactcat tcctctcaat gttacagact gctgaacata aagatgaaaa tagctgtgtc
    21601 ttagattcca aattcctgtt tgagcttgat gatcttacct tagtcaaaat tttccgtctc
    21661 attcgggtca gtcgccatat tcgccaacaa ggaggagaaa atgattaagc cgattaccgt
    21721 aaatgaagca ttgattggta acgccctgct caatattaaa gagggaaata tccatccttg
    21781 tctaaaaatg ggattttctg aggagcaact aaaagcgatc aataatctca gtattgatga
    21841 aattatggat attagcaact ccgttgtctc ttttgctaag gtggagatta atcacgaaac
    21901 cttttggaaa ttactggcta ttgcacaagc caatactcaa cagcgacaaa ttattgaccg
    21961 agcattattg ctcggagcct ctattgaaat gttgcaccag tattttggtt tatcaacctc
    22021 tgaagtctcg gctcgccgtc aattactcgg tatcgaagaa aaaatgggac gaaaagcggc
    22081 agcaagtgat gaagaatcta cccatatttg ggaaatttgg caaagataca aacaacgaat
    22141 ggaaatccta gattcacaag aaggattaga gcttctatgt ctgattgctg aggaaggcaa
    22201 tatgaatcta acggttgttt ggaaactggt ttccgaatgg tattcaaaac ataagtaaaa
    22261 aataaatgcc ccgaagttgg agctttgggg cattcgatat tgagtcttgt atctctatct
    22321 tatgaattac aaggactttg cagaagtccc gtgcattata gccataggag agagaatagc
    22381 aagagaaaaa ctcttttatc ctggtggaga gaaacaatgt ttagcagcac gaataagcca
    22441 acagagcatg gattgctatt ttttggcaac caacacgaaa cagtccctac tcgattatta
    22501 caagatccct gccttacacc aagagcaaag tttgcttggc agctcattaa gtgcaatgtt
    22561 caagcctttc aaggaggatt atttccctct tatgagacgc tcagcaaaat gttatccgat
    22621 agaccttatg cggaggctaa attatcggaa aaagtcgtga ctcaaacact ctatttactc
    22681 cgtcttactc gctggcttac tttatgtgaa acagtgcgtg atgagcgagg ttatgtacaa
    22741 ggtaatgttt atatcctaca tgatgaacct gtgccaattt tagatgcaat tcaattaaat
    22801 agcgactatc tctctttttt agataaatgc accaaacata aagatagcct tattaatggt
    22861 gtggcaaatc atattgttga aagtctaata acagacaaaa ccaaatggca ctatgtctct
    22921 catttagact gtttacaaag tcgttatcag atataccagc aacagcagct ggtgaaagat
    22981 aaacagccat cgcaaacaga acaagaatta agcaaaattc aacaaaacat cctaacttcc
    23041 actatggaag ttagggattt tgatgaggaa gtcaggaaaa aatcctctaa aaaccagact
    23101 tccaataagg gagttagggc taaaaatgaa gataagtcat tgattttaga cttacttcca
    23161 ttagggaagt cagatgtaca gtaccgtact ttatatatta ataagtactg tactggggaa
    23221 ccgagcgaaa ttacttggcc acaagaaatc ccattaactt cacttgaaca aaaacttact
    23281 gcacaggcaa tgaagggatt agacctcggt ttatgccaag ctattttgtt ggaagtacaa
    23341 caacgcatta ttcaaaagca ggatgtgaaa aaaccgaaag gttatctcta tacgcttatc
    23401 cagcgggcga agcagggtga atttaaaccc tactattttg aattaggaaa aaatcttccc
    23461 tcacagaatc aggctaacaa taattctgct cattctatac aaaaactgac tgagcagcct
    23521 actgagaaac cggtcttaac ttcagcagac agagagcaaa tggctagtcg tatgcagaag
    23581 tttagagctg aattactttt acaataagat taaaaaacaa tcactgttaa ggggcttaat
    23641 agtgagtgaa aaataatcag tgtgtaccag gtacacaatg gataaaaaat aaacagcgta
    23701 ggcagtgtct gcaaagatta aaaaacagac aatggaaagc ccctttccaa agactaaaaa
    23761 ataatcaaat aaacaaggag catatatgac cactcaatta gatcctcaac ttggtccact
    23821 tcgtagtgag atcactttta cgttacatac ccaatatgcc cataaattat gggtggggcg
    23881 accaatgatt cgtaatgagg aaggcaaagt aactcaatcc tccattatca gcgtaccaaa
    23941 ttgctttgca atgctaaccc aaattcaacg ggctgcatca gaagatgatc cttatgctga
    24001 cgattatctg attcaatttg aagaaagtgt gatcaattat cggaaggaaa tccaaaagct
    24061 caccaacgac attgtcacgc tctacgccaa aatgttgccg gagggaattt ctattgaacg
    24121 ctgtgccaat atttccccga tttcttaccc gatttatgtt aattcacagc tagggtatca
    24181 attactctac ttacttggtg attttgatag cctttgccgt tcagtaatga cggcagctca
    24241 tattgcgatt atcaatcgtg cagaagctca agattggatt gaagctggtg caaggttaat
    24301 ccggaaatgt tttgggatcg ttgagcgtta taagagttca ggaatcactc gtcgggacta
    24361 tcaagaaaag aatgctcgct atcaagctgc gataaaacga atgggctata cactctcaga
    24421 tgctgtactt accggtgagc atcgtgctga gtttgctccc ttcatcaagc aaaacactac
    24481 tgttgaagaa gagcaatccg tagaaaccca tatcacggca cagacaaatg aatctcaaaa
    24541 ataaggagtg atatgaacct catctctgat gaaatttatc ggcaattagt caaagattct
    24601 gggctgaata cttctctgaa acagctattt agccattttg acactggctc agactatgaa
    24661 cttttgcaag aacagttcac tcaagctcgg gcttatttta tggctgcaca ggatagtatg
    24721 gtgcagtctg tgcggcagga tctttcacct ttggctgttt atatgattaa ggataaggcc
    24781 tcatcctcag gcggtacatt tttacgctgg cgtagtatgc aaaatgccag aaccggtggc
    24841 acagtttggc agccgattgt agatgataag tctgtcccag tggaggtgag gaaaaaagtt
    24901 gtcgcagtag aaaaagacag gattttgatt aatatgcaga tttcggtgtt taatcatatt
    24961 ttgcgacagt tggcagattg tgctgaaaag ttgaaagagg tagataatgc cgttgcgaaa
    25021 tcagacttaa attcgtagta aatttatata taacaactcc tatattggtt gtgtgtaaac
    25081 gccaaccacg gtgggctgac gtggtaaaac aaacagtccg ttaattagga catattcaag
    25141 tttgtaatac ctgaaaatcc ggtttgtaat ccctgaaaaa gtgcagtttg taaatcctgc
    25201 attaaaaggc cttttaaagg taagggtaca agccccttac cttcacgaag aaaaagcctt
    25261 tacaacggag gaataagtga ttgcacacgt aaaaatgaaa aattcactct aaccaaattt
    25321 taattaaata cttttttctt aggctgaatc aagtttaata gaactaactt aatttattga
    25381 aggagtaaat acgatggcag gaatcaataa agtgattatt gtcggtaatc ttggcaacga
    25441 tcctgaaatg cggactatgc ctaatggtga agcagttgct aatattagtg tggcaacttc
    25501 tgaaagttgg acggataaaa ataccggaga acgtcgagaa gtcactgaat ggcatcgtat
    25561 cgttttttat cgccgttatg ctgaaatttg tggtcagtac ctacgtaaag gctctaaaat
    25621 ttatatcgaa ggaaaattac ggacacgtaa gtggcaagac caaaacgggc aagagcgtta
    25681 tacaaccgaa atccaaggtg aactattaca aatgttagat agccgtaatg ctacaaatag
    25741 cgtagatgga caacaatcta actatcaagc tatgagccaa tctccaaaag caacacatcc
    25801 acaagattta ccaatggata actttgatga tgatattccg ttctgagtta catataattt
    25861 aaaactgtaa aataaaaccc atataaatat agagaaccct ttattttaaa agggttctct
    25921 ttttttacat taatttcgac acaacatctt taatttgata gtatttatat atgatatttt
    25981 gggtatccgg atttagcggt tgatctgcgc tagacgtaat tttgtaaata aaccggattt
    26041 tagggttgac ggaaaaggcc agatgcccta atattagatt caagagctga gaacaacggc
    26101 tcgggcataa gcccaacggg cgcaccgccg aacttggtgc aggatagaag ccatgtcata
    26161 cgatgcaaat gatgcgctga atgaaatcga agaggcgctt agcgagcttg aaagggttgc
    26221 tgaagaccta atcaacaaca acccgaataa agaatcagaa ttacgcggcc aaggggttca
    26281 ccaagcgaca aagcacctcc gttttcgtat tcgcaacatc cgccgcggcg aagcaatttg
    26341 actaacatgc cgccctaggg gcggctttca gcgaggtcag catgaaaatc aaactctatt
    26401 ttccggacga gtctatcgcc acgataaagc gaatggggct tcgccaaatg tctcccgaga
    26461 ctctcaggtg gactgccgat catccgtcaa gcagctatgg tatgggcgct ttgctcagag
    26521 gcaagtctgg tgaaatcctt gatgggaagt cttttgctgc aatggtgcat gcctttggcg
    26581 cgtggattga aacagacagt gaagatacca gtcgtcgagt tcataacgcg ctagtcactg
    26641 ctgccactgg caccgaggaa tcggttaagg tggcaaagga gtaatgtcga atatcctcaa
    26701 ctggcctgat tacaaagtgc tccaggtatc cgaactggag cacgattacc aggtacacgc
    26761 cgaagtttcc gaaccgccta cgcagtgccc ccactgcaat catcctgaaa tcgtcggctt
    26821 tggtcgccgt gatgaggtga tcatggatac acccgtccac ggaaggcgta ccggcatcat
    26881 gcttaaccgc cgtcgctatc gctgccagtc ttgccgaaag acgtttctgg agcctgtacc
    26941 gcacaaagac gaaaagcggc agatgaccaa ccgcctgatc cagtacatcg agcgcgagag
    27001 cctgcgccgc acgttctcca gtgttgccga ggatgtgggc gtcgatgaaa agaccgtccg
    27061 taacattttc aacgactatt gtgaacgcct cgaaaagacg ctcaattttg aaatgccgca
    27121 gtggttgggt atcgacgaaa tccacatcat caaaccccgc tgcgtgatca ccaacattca
    27181 gcagcagacc attgtggaca tgctggataa ccgcaataaa accaccgtca cccgctacct
    27241 gagcaaacgc actgaccgcg acctggtgcg ctacgtggca atggatatgt ggaggccgta
    27301 ccggcaagca gtagaaacca tgattcctga cgccacggtg atcatcgaca agttccacgt
    27361 tgtcaggatg gcgaacgaat cactggaacg cgccagaaaa gccatcagaa gcgccctgac
    27421 gccacagcag cgccgtgggt tgatgcgaga taggtttgtc ctactgaaac gccgtcacga
    27481 gctgacagat gccgaataca tgcgtttttc aggctggaca ttgaattacc ctgagattgg
    27541 ccaagcctac gaactgaaag aagccttttt cgagatttgg gactgtcaga cccggcacca
    27601 ggcacaggag gcatattact cttggctgcg acagattacg ccggaaatga aagcccacta
    27661 tgacccgctt atcaaagcga tgggcaactg gcacgatgac attttcgctt acttcgacca
    27721 ccccattacc aacgcctaca ccgagtcact gaacaacctg attcgtgttg ttaatcgtgt
    27781 tggccgtggc tacagctttg aagcgctgcg agccaagatc ctgtttactg agggcttcca
    27841 gaagatcaag aagccacgct atcagcgtca acggataccc gagggcgcta tgggcaggat
    27901 gccgttctat ggcgttgccg aagcggggcc atccactaac tacggcgctg acatatcaac
    27961 actggtgcgg gagattgagg cggggcgttt atagccctgt ttcaaccctg taatccggat
    28021 acccaaataa agtcctatca acgttattaa gagcggacag gacttttatg atctttataa
    28081 tttctagtat taaggggttg aaataacagc tttaggtgtg gtttttcttt ggtgaaaata
    28141 agcggtaata agcaacatag cataaagtat tgcccccatc agccataaca gaccatccca
    28201 ataagcgacg ctataactat aaataaaggc aaataaaagg ggaccaatga tcccggtaat
    28261 attggttagg ctcaccagag taccttgtaa tttcccttgc gcattatcat cgacagattt
    28321 tgataaataa ccttgtaatg cgggttgccc catacctcct gccgctaagc aaattaatgc
    28381 tggtaagatg acccaaacgt ggcctatcca cgctaataat aaacagccca tcatatcaat
    28441 agacatactg atcataatgg tggttttttc gccccatttt tgtgccaatt tcccagcgac
    28501 aatcgcctga aagaaaatat ttaatacacc cagaaccgcc aaagacatac cgatagaagt
    28561 tgtgttccaa tcaaaacgat attgtgtaaa cagcacccag atggtggcag gaatttgccc
    28621 gataagctgg ataataaaat aggttgctaa ccaaaagtag aggcttttct taaaaaaaac
    28681 agtgactgta tttgaggcag tttggttttc aggtgtccta ttggcaacaa gcgcttctct
    28741 tttttgtgtt tctcggaaaa agagcaaaga gagtattaat aatatcgagt gtgaaatagc
    28801 ggcaaaaata aatggcatat gagcactgat atcacctaat aatcccccta gcattgggcc
    28861 gataataagg ccaacaccaa aagcaccacc taagaaacca aaatagcgag ttcgattttt
    28921 agcgggagtc acatcactca tcgctgatgc acatacggca cctgttgcgc ctgtgatccc
    28981 cgcaatgatg cgcccaatat agagcatcca aagtgtggtt gagaatgcca ttaaaagata
    29041 gtcgagtgcc gcgcctaaaa gggaaaacag caagatgggt tttctgccgt atttatcaga
    29101 cagtcgtcct agaataggag caaaaataac ctgcatggta gcatagagcg ctaatagcac
    29161 accgtaatgg gttgccagtg aattttcact gacaaattca tttaatagag tagggagtac
    29221 tggcatgata agcccgatac caatggcatc taatacggtg atcagcagta taataataat
    29281 tgatttattc attgagatcc taaaaatcta tcagtgatag agtgggtgta atatatct
//
LOCUS       DANLXO010000018        28483 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.018, whole genome shotgun sequence.
ACCESSION   DANLXO010000018 DANLXO010000000
VERSION     DANLXO010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28483
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.018"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..420
                     /locus_tag="PXD69_000689"
     CDS             <1..420
                     /locus_tag="PXD69_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha4 family transposase"
                     /protein_id="HDL6282911.1"
                     /translation="RGRGAAGKTAVFGLLKRDGKVYTVVVPNTQFATLLPIIREKVKP
                     DSIVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHINGIENFGSQAKRHLRKFNGI
                     PKVHFELYLKECEWRFNHSDLKSQISFLKQLVKGSLG"
     gene            479..1409
                     /locus_tag="PXD69_000690"
                     /pseudo
     CDS             479..1409
                     /locus_tag="PXD69_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433453.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(1457..1972)
                     /locus_tag="PXD69_000691"
     CDS             complement(1457..1972)
                     /locus_tag="PXD69_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HDL6282912.1"
                     /translation="MQKKSLISRLLKNIFLYGSLFIIISLVVDWYRSPSAPAQFEQTV
                     HYDIQHQPKVIAQLSHEKPMLLYFWGSWCHYCQVVSPNIQQLANDGTEVLGVALKSGD
                     ENDVQAYLNENGYTFATLNDPSGDFSRGWNIQATPTILIIKDGKIAHHTTGYTSYLSL
                     KFRLWLADVLY"
     gene            complement(2038..2667)
                     /locus_tag="PXD69_000692"
     CDS             complement(2038..2667)
                     /locus_tag="PXD69_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6282913.1"
                     /translation="MALDFNSVGLDSVEAKGGYGIGLQIGQQLLGSGMDVNAETVARG
                     IYDVLNNNEPAIDINEVTAALQELGQRAEAAQAEAFKAIDAENKAFLEENKKANGVIV
                     TDSGLQYEILTEGTGEKPTATSTVRVHYTGSLIDGTVFDSSVKRGQPAEFPVNGVIRG
                     WTEALQLMPVGSKWRLTIPQELAYGERGAEASIPPFATLVFEVELLDIL"
     gene            complement(2815..3444)
                     /locus_tag="PXD69_000693"
     CDS             complement(2815..3444)
                     /locus_tag="PXD69_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDL6282914.1"
                     /translation="MAVSATSFAQTTQPTAAEQMNAVKASVAEKATVAKEATKEKAAE
                     LKAGSAEKMAIAKAKTESFKDSAKNKMDAVKATTAEKTDVIKAKAASASDTMKVKAQE
                     AKAATAEKAATAHETLNSAKTATAEKAASMKAAATEKMSAVKKSQKVNINTANEEQLQ
                     SLTGIGEAKAKAIVEYRKKHGKIKNAAELANIPGIGDATIEKVAPYLTF"
     gene            complement(3618..4181)
                     /locus_tag="PXD69_000694"
     CDS             complement(3618..4181)
                     /locus_tag="PXD69_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5358 domain-containing protein"
                     /protein_id="HDL6282915.1"
                     /translation="MLRKIVLLSTGLLLAACSSNEPQQPEAFPGEFANADYVLSEENA
                     QKWVIASEQAKQCIYPNLTRIQQEHFSKEDSYIFSQYVFFYPLEEIIGEQYVKIIQND
                     EKSMGYAQYLFKKLKNNEAVEALPKKQCATLRTNAKNDLAVVKGQYQSGMIEETNSQE
                     GKSGDKVATNDNKFFFDIIKWGSMLLL"
     gene            4331..6928
                     /gene="mutS"
                     /locus_tag="PXD69_000695"
     CDS             4331..6928
                     /gene="mutS"
                     /locus_tag="PXD69_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDL6282916.1"
                     /translation="MTQDFSTHTPMMQQYLQLKAQNPDILLFYRMGDFYELFYDDAKR
                     AAALLDISLTKRGQSAGEPIPMAGVPYHAVEGYLAKLVALGESVAICEQIGDPATSKG
                     PVERKVVRIVTPGTVSDEALLPERQDNLVAAVYEEKGTFAIATLDMTSGRFLISELAS
                     KEALSAELQRVQPAEILYAEDFSAASILTNYKGLRRRPVWEFELVTAIQLLNRQFGTQ
                     TLAGFGVEKAVVALCAAGCVLHYAQETQRTALPHINAIHLAQHSDTILLDAATRRNLE
                     LTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQARQKAITALIQYER
                     MSDLQPLLQQVGDMERILARVALRTARPRDLTRLRTALAQLPEIAKNSQNLTASIDQL
                     LAQLADFSPLHDLLERAIIENPPQLIRDGGVIAEGYNAELDEWRQLSDGATQYLENLE
                     IRERESTGIDSLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTY
                     EDKVLKAKGASLALEKQLYDELFDVLMPRLGELQLAAMMLSELDVLTNLAERADSLGY
                     VCPSFSPMRMVNIKGGRHPVVEQVLTEPFIANPVFLNSQRHLLIVTGPNMGGKSTYMR
                     QIALITLMAYIGSFVPAESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQ
                     ATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFELTGLPNQLKG
                     VANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQRLAHLEEI
                     SHQTKQANEHPQADLLFSDGFDLQKNEAIQPLVVENEVEKALKALQPDELTPRQALDE
                     LYRLKKLLG"
     gene            complement(6976..8430)
                     /locus_tag="PXD69_000696"
     CDS             complement(6976..8430)
                     /locus_tag="PXD69_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6282917.1"
                     /translation="MKKIVSTLLILTSNLAFAETTPAQLQEKMDNQRMQKNLHTLEKP
                     EPQAKPQAVNAQAHRQSISISSQQLLQQPELLNSAMLTALVTNHTENVQFLLPIYQQL
                     PASKQNSEVVQWAEAVNAKAKQNYSEAIKGYRQLLAKYPENQPIRMQLAVALFENREN
                     EAAEAQFYKLQADKLPQEIANAVNSYLEAIGKQDQWSFQGGLTYLNDPNINNAPNAGT
                     TYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFRLNGNGKYYWNNKKYNEYSLRE
                     SLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSNAGGVNARWQYWITPQWQSA
                     ISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGANFNRTSPRDLDDSFIRR
                     GVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEYGVQASIWHRALHFKG
                     ITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF"
     gene            complement(8654..9292)
                     /locus_tag="PXD69_000697"
     CDS             complement(8654..9292)
                     /locus_tag="PXD69_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDL6282918.1"
                     /translation="MRYTTEQIIEKLRQLKVVPVIALDKAEDILPLAKTLSENGLPVV
                     EITFRSEAAEEAIKLVQANYPEVLIAAGTVLTKEQVLTAKNAGADCIVTPGFNPTIVK
                     YCQVLGLPVTPGVNNPMAIEAALELGIQAVKFFPAEASGGVKMIKALLGPYGNLQIMP
                     TGGISPQNINDYLAIPNVVACGGSWFVEKSLIKEQKWEEIGKLTKEVVELVK"
     gene            complement(9380..10327)
                     /locus_tag="PXD69_000698"
     CDS             complement(9380..10327)
                     /locus_tag="PXD69_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDL6282919.1"
                     /translation="MKKLAILGECMIELNGEPFGEMHQTYGGDSLNTATYLARVSSPE
                     QIEVRYISALGTDKLSQGMLAAWQVDNINTDFVLRDEHRQPGLYLIQLDKQGERTFLY
                     WRNQSAARYLLQHPGYPKALSALNEVDMVYLSGISLAILPENDRTLLIAQLRELKTQG
                     VKIAFDSNYRPKLWESVAAAQAHYAELLQLVDLALVTFDDEQLLWGDVNEQATFDRLT
                     QYGIQTIVVKQGSLGATVLQNGERTFVPTVAVEKVVDTTSAGDSFNAGFLNGYLLGKD
                     VVTCCQQGNAVAGIVIQHKGAIIAKSATTHLKSQFEQSI"
     gene            complement(10344..11189)
                     /locus_tag="PXD69_000699"
     CDS             complement(10344..11189)
                     /locus_tag="PXD69_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6282920.1"
                     /translation="MSIAQNHNFKDKVVVITGAGGVLCAYFAKEIAKTGAKVALLDIN
                     LEAAQNFASEIADEGYIAKAYQTNVLELESIKQARDEILKDFGTCDILINGAGGNNPK
                     ATTDNEFHDINLPENTKSFFELDKAGIEFVFNLNYLGTLLPTQVFAKDMLGKEGANII
                     NISSMNAFTPLTKIPAYSGAKSAISNFTQWLAVYFSKVGIRCNAIAPGFLVSNQNKAL
                     LFNADGTPTARANKILTNTPMGRFGQADELVGAILFLMDHHYSSFINGVVLPVDGGFS
                     AYSGV"
     gene            complement(11201..12472)
                     /locus_tag="PXD69_000700"
     CDS             complement(11201..12472)
                     /locus_tag="PXD69_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005668000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HDL6282921.1"
                     /translation="MLWLFLGSLFLFLFLGVPVALSMLLSASFMLWKMDMFDAQLITE
                     NFVMGTNNFPLMAIPFFMLTGEIMKHGGISERIINFAMSMVGHIKGGLGYVVIISGLI
                     FAGLSGSAVADTAALGAILIPMMVARKYDVARSTGLICAAGIISVVIPPSIPMIVYGI
                     TAGASITKLFMGGMVPGFLMVLGLWLVWKFLYRNEEQTVEPKKTGKERWAAFKSAFLP
                     LLLPIIIIVGLRGGIFTPTEAGVVAAIYAAIISIILKGLTLDKIQDVFLGTIKTTAMV
                     MFVAAAAMISAFAVTVAQIPMELVEFIKGITDSPTVLMFVIMIFLLLVGCVMDLIPAV
                     LIFVPVLLPLLRAYNIDIAYFGIMMVINLSIGLITPPVGTVLYVGSGIAKIGIARLTK
                     GIYPFLLVYAAILFLLILFPEIIIVPMNWLS"
     gene            complement(12475..12954)
                     /locus_tag="PXD69_000701"
     CDS             complement(12475..12954)
                     /locus_tag="PXD69_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL6282922.1"
                     /translation="MQISTALDRTLKLLAIIALSTMIILVFFNAVLRYFFDSGIAWSE
                     EFARICFVYMIFLGIILVAKERGHLTVDIVVSALPAKVQMYLLFFADILVLVALSFIT
                     YGAYQLMLLTYTQKMPATEISSAFLYFAAVISSISYFAIVFTNLWKHIRLAFIKEEK"
     gene            complement(13015..13998)
                     /locus_tag="PXD69_000702"
     CDS             complement(13015..13998)
                     /locus_tag="PXD69_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL6282923.1"
                     /translation="MKLKTFTKALLISSLMFTGSAFAKTIIKIGHYNSDVHPSNIALQ
                     EYFKKTIEEKTEGRYEIRIFPNNQLGGEDQIVNGLRNGTIEGGITGLLLQNVDPIFGV
                     WEWPYLFKDNAEAKKVLESPIAQEIGEKMEKYGIKLLAYGMNGFRVISSNKKVENFDG
                     FKGLRLRVPLNSLFVDWAKAMHINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLY
                     EVQKYIIESNHIFSPGLLQLSLKTWNKMSKEDQTIFLEAAKLYQEKEWELAMKMEQDV
                     KDFFHKNGKEVIVPSEQFKADMLKASETLYQNFYQKYDWAKDVISKIHAAK"
     gene            complement(14027..15052)
                     /locus_tag="PXD69_000703"
     CDS             complement(14027..15052)
                     /locus_tag="PXD69_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL6282924.1"
                     /translation="MEKPLKSVCLVEPNKVGIQTVSYPVKGENDVLIKVEGMGICGSD
                     IGAFRGTNPLVTYPRILGHEIVGTVIESGKGMPNNINVGDRVIIEPYIYCGHCYPCSI
                     GRTNCCESLKVLGVHIDGAMQEVVRHPAHMIIKTPDMPIHELALAEPLTISLHAIHRT
                     KVKAGEHVAIIGAGAIGLMAALVAKAYGATPILIDILDKRLDYAKSIGIPHTINPTKE
                     NDLEAIKSITNGRMAEVVIEASGANVAVQNTLKYTSFAGRIALTGWPKTETPLPTNLI
                     TFKELNIYGARTSKGAFEEALELLASRRIEPKDIISKVITFDEIPHYIEELSANPDDY
                     LKIIAVF"
     gene            15216..15977
                     /locus_tag="PXD69_000704"
     CDS             15216..15977
                     /locus_tag="PXD69_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HDL6282925.1"
                     /translation="MQNSSRTYTKIGKILKEEIAQGKYRVGDKLPTERDISERFEVSR
                     TIVREAIVMLEVEKLIEVKKGSGVYVIRVPELFPEDFPEEKDNELRDVGPFELLQARQ
                     LLESSIAEFAAQQATKQDIQVLRNILESEKKLLLEKMDDYSADKEFHLALAHMTGNDV
                     LIQLQEQLWRYRFNSAMWAQLHSRILQHDHHHLWIEDHERILNAIQRKNPALARKAMW
                     QHLENVKTKLLELSDVEDPKFDGYLFNVNPVVVGI"
     gene            16007..17191
                     /gene="uxuA"
                     /locus_tag="PXD69_000705"
     CDS             16007..17191
                     /gene="uxuA"
                     /locus_tag="PXD69_000705"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HDL6282926.1"
                     /translation="MEQAWRWYGPNDPVSLDDVRQAGATGIVTALHHIPNGQVWSVEE
                     INKRKALLAEKGLVWSVVESVPVHEEIKTQTGNYQQWIDNYKQTLRNLASCGIDTVCY
                     NFMPVLDWTRTDLEYEMPDGSKALRFDQVAFAAFELYILKRPGAEATYSSAEQAEAKA
                     YFEQMSDADIAKLTKNIIAGLPGSEEGYTLEEFQAQLDRYQGLSAEKFRTHLAYFLNE
                     IVPVAQEVGIRMAIHPDDPPRPILGLPRIVSTIEDMQWFVETQPLAANGFTFCTGSYG
                     VLAENDLVKMAEQFADRIYFAHLRATQREENPQSFHEADHLAGDVDMFGVVKALLTEE
                     YRRKANGDHRLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLRGLAEFRGLELALKKVYF
                     ND"
     gene            17242..18111
                     /locus_tag="PXD69_000706"
     CDS             17242..18111
                     /locus_tag="PXD69_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6282927.1"
                     /translation="MFKKYFGEIILFLVTFIAAAGWFFSKHALVGLPPIGFMGGRFIL
                     ASLILLPFSYRELYRLDKVQVKYSVITGLTYGIYTIFWVLGLAFSTVFGEGAFLVSLA
                     MLIAPLLSWLIFKHTPPKIFWLALPIALSGLYFLSAEKGIFHFSLGSTIFLVSSVFGA
                     LYFVLNNQYAKQVSLFPLITIQLAIVGAVCSLYSYFMESWHFPILTEVWLWFAASVLI
                     ATNLRFLMQTLGQKYCHIGTSALIMLLEPVWTLLLSVMLLGEQLSATKWLGCSLILIA
                     LIIYRLPILRLKK"
     gene            18279..18593
                     /gene="rsfS"
                     /locus_tag="PXD69_000707"
     CDS             18279..18593
                     /gene="rsfS"
                     /locus_tag="PXD69_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDL6282928.1"
                     /translation="MEQNLVEFLTKTLDDLKAQDILAIDVKGKSSITDTMILATGTSS
                     RHVASTAERLITEAKQAGFEVFGDEGKAVADWIVVDFGKAMVHLLQSDSREMYQLEKL
                     WA"
     gene            18670..19137
                     /gene="rlmH"
                     /locus_tag="PXD69_000708"
     CDS             18670..19137
                     /gene="rlmH"
                     /locus_tag="PXD69_000708"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDL6282929.1"
                     /translation="MKIQLIAVGTKMPAWVTTGFEEYQRRFPKEMPFELVEIPAGKRG
                     KNADTKRILELEGKAMLAAAGKAKIVTLDIPGKAWTTEQLATQLEGWKNDGRDVALLI
                     GGPEGLSPECKAAAEQSWSLSPLTLPHPLVRVVVAESLYRAWSVTINHPYHRE"
     gene            19161..21110
                     /gene="mrdA"
                     /locus_tag="PXD69_000709"
     CDS             19161..21110
                     /gene="mrdA"
                     /locus_tag="PXD69_000709"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDL6282930.1"
                     /translation="MFGKLAKFTASNQREKVRDGQAESNLYARRALVAFLGVLALSGV
                     LLTNLYHLQVVNYEDYQTRSNGNRIKLLPVPPARGLIYDRNGKVLAENLTYFGLFIVP
                     EKTENIEQTLTELKDIVGLTDEDIENYHKEKKRSSRYTPIMLKGNLNEAQMARFAVNQ
                     YRFPSLDVQAYYKRNYPYGELLTHIIGYVAKINENDKKKLQEAGKFSNYAGSHDMGKL
                     GIEKFYEDQLHGVTGFEEVEINNRGKVIRKLRDQAGVAGSSIRLSIDVELQQYVMSLI
                     AKHKGAVVVLDPRDSSILAMVSNPSYDNNLFVGGISGQDYKALLDDPTRPLYSRTTQG
                     TYPPASTIKPFMAVAGLEEGMITPSTTISDPGYWILPGTTQRYRDWKRSGHGATNVNK
                     AITESSDTFFYQLAYKMGIDKMSDWMKKFGFGVKTGIDIFEESAGVMPTREWKQKRYK
                     KPWVQGDTIPVGIGQGYWISTPLQLAKATAVLINNGRVNTPHLMLEVQSSNSVTPYQD
                     PLLYEDIKGVPDVYWNLAKQGMYNVNHAANGTARKVFAGAFYHSAGKTGTAQVFNLNG
                     KNYDKNAIKKELHDHAWFIGYAPYEQPKIVVALILENAGGGGSAAAPVARQIMDYALR
                     KGIGEQPDSQNSEQNKPLVTEEHHE"
     gene            21103..22230
                     /gene="rodA"
                     /locus_tag="PXD69_000710"
     CDS             21103..22230
                     /gene="rodA"
                     /locus_tag="PXD69_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDL6282931.1"
                     /translation="MNSGFKKLFWKIFSLDLLLLSGLLAITGYGLLVLYSASGANERM
                     FTSRLIQVSLGLGLMLIMAMVPPRFYQKVSPYLYIFCLILLILVDLVGETSKGAQRWL
                     NLGFVRFQPSEIAKLAVPLMVATYLGKRPLPPSFKDTFIALAIIIVPTLLVAIQPDLG
                     TSILVCSAGIFVLFLAGLSWKLIGAGVVFLAGFIPIMWFFLMHDYQKTRVMTLIDPNK
                     DPLGAGYHIIQSKIAIGSGGINGKGWMEGTQSQLEFLPEPHTDFIFAVLSEEHGMIGV
                     LILLAIYLFIIARGLVIGTKSDSAFGRILSGGTALLFFVYVFVNIGMVSGILPVVGVP
                     LPLFSYGGTSYVTLMAAFGLMMSTYVHRKRVGSNNPYDKLK"
     gene            22322..22981
                     /locus_tag="PXD69_000711"
     CDS             22322..22981
                     /locus_tag="PXD69_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDL6282932.1"
                     /translation="MRLGKIVTLLLAGFLTFSSLNSLAATKNTKAKSSILAKKQATSK
                     AIKKVGISKVKKKEVVAKATKKKTISTVTTKPIKSTKKLARKVVKKTVTAKKKLVKKQ
                     HKPLVKKHFQTGVASYYANYFNGRRTANGETFNNAKMTAAHRTLPFGTLIEVTNLRNG
                     RSVVVRVNDRGPYAHARVLDLSSAAAKKIGMHHSGTARVKIAIVDKSKLGSTNQFYVM
                     N"
     gene            22995..24173
                     /locus_tag="PXD69_000712"
     CDS             22995..24173
                     /locus_tag="PXD69_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDL6282933.1"
                     /translation="MKKTLVKAMSVVGFAVSSIAYADLNTNFNLSAPQINAQTYILMD
                     YNSGEVLVSLNPDQRQYPASLTKMMTSYVVGEALKSGKVQNSDMVIVTENSWAQKFPG
                     SSLMFLDLNSKVSVGELMKGLIIVSGNDASVALAEHVSGSQAAFINEMNKYAQQFGLK
                     NTHFTTVHGLDDPEQYSSARDMAIIGSHIIRDQPEEYKIYAEKEFQYNIKKPQPNRNG
                     LLWDKTIQVDGMKTGHTDKAGYNLVASAINPNTRLISVVMGVPTYKGREVESKKLLQW
                     GFANFETIKSIPAAQSVAEQSVYYGEVNKVQLGSVQDSFVTIPKGRSADLKARYELEK
                     KNLEAPLAKGQVVGKMIYQLDGKDVASTNLQVLQDVPEAGIFGKAWDWIALTVKSLFD
                     "
     gene            24341..24640
                     /locus_tag="PXD69_000713"
     CDS             24341..24640
                     /locus_tag="PXD69_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HDL6282934.1"
                     /translation="MSQPKAINLQDLPQAKLKDLLEFPCHFTFKVVGANREDLVDDVV
                     VVTQKYAKGDYNPRQQKSSKGTYNSVSIDIVAENIEQVETLYTELAKINGVRMVL"
     gene            24702..25355
                     /gene="lipB"
                     /locus_tag="PXD69_000714"
     CDS             24702..25355
                     /gene="lipB"
                     /locus_tag="PXD69_000714"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HDL6282935.1"
                     /translation="MKLIIRQLGIQPYEEIWHQMQSFTDSRDGNTDDEIWLVQHPAVF
                     TQGSAGKPEHLLNPTNIPVVQSDRGGQITYHGEGQQIMYVLIDIKRLKSLGKEVSVRD
                     LVTALEQTVVQTLAEYGIESYPKADAPGVYVDGKKICSLGLRIRKGCSFHGLALNINM
                     DLTPFQNINPCGYAGLEMCQLSELVHRPDLRCEEVAPKLVAHFSTILGYNNQQIINN"
     gene            25370..26377
                     /gene="lipA"
                     /locus_tag="PXD69_000715"
     CDS             25370..26377
                     /gene="lipA"
                     /locus_tag="PXD69_000715"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDL6282936.1"
                     /translation="MATSTAQTTATATVKKMSPFKMEKGVKYRDAAKTSVIQVRNIDP
                     DQELLKKPEWMKIKLPANSAKIDSIKNGMRRHGLHSVCEEASCPNLHECFNHGTATFM
                     IMGAICTRRCPFCDVAHGKPLPLDPDEPRKVAETVQDMKLKYVVITSVDRDDLPDRGA
                     AHFSATVREIKALNPHCKVEILVPDFRGRVEQAVAILKENPPDVFNHNLENVPRLYRE
                     VRPGADYKWSLELLKIFKQEFPHIPTKSGLMVGLGETNEEILEVMQDLRDHGVTMLTI
                     GQYLQPSRHHLKVERYVPPAEFDMFREEAEKMGFEHAACGPFVRSSYHADLQAKGELV
                     K"
     gene            26564..27667
                     /locus_tag="PXD69_000716"
     CDS             26564..27667
                     /locus_tag="PXD69_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6282937.1"
                     /translation="MKKLLLNSVFAATLLAFGATANAEIKTITDVLGREVKVDVPAKR
                     VALTFYYPDYIAVTGVENFDKVVGISREFWEKFNPGSWALFAEKMPNLKNIADLGYVN
                     SGTFSTEKTIALKPDVLVLPEIQYQALASEISRIEQAGIPVVVDFNKQTIENHTKSVR
                     VFGQLTGTEERAEKIAKEYEEGIADIQSCIDNAKVSKPKIYAEFGNKGPKEHSFTFGK
                     NMWGAIAETVRGDNISAPFVENWGQINPEQVLVSKPDVIMISGTELGNDTNPEIMSMG
                     INIEEADAQKRLKGFIERTGWKELPAVKSGRVYGLYHTASRSISDLASAQFMAKALYP
                     ELFKDIDPEKTYLDFHNNYLPITPKGTFFMQLK"
     gene            complement(27758..>28483)
                     /locus_tag="PXD69_000717"
     CDS             complement(27758..>28483)
                     /locus_tag="PXD69_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL6282938.1"
                     /translation="LVVADKINLHFEQGKIYTLLGPNGAGKSSLLKTLFGEIAHQGTI
                     DFDGNKLTSSHLHSWRKEIGYMPQDTQVEASLSALEVILLGQLDSLNMYISDELLNEA
                     VDIMDKLGISHLAHQDIMRLSGGQRQMVMFAQVLLRKPHILLLDEPVSALDMYHQINL
                     LEYVNAYTRANNLITIMVLHDLSLAAQFSDSVMLLSEGKFKHKAELVICWNAILFRDS
                     IMSILRFYMMETARRLSARFANV"
BASE COUNT         8144 a         5601 c         6298 g         8440 t
ORIGIN      
        1 cgtggacgtg gtgcagcagg caaaaccgcc gtgttcgggc ttttaaagcg ggacggaaag
       61 gtttataccg tggtagtacc aaacacgcaa tttgccacac ttttgccgat tattcgggaa
      121 aaggtgaaac ccgatagtat tgtttacacc gatttctatc gaagttatga tgtgcttgat
      181 gtgagtgaat ttaaccattt tcgcattaat cacagcacac acttcgctga aaatcaaaat
      241 cacattaatg gaattgagaa ttttgggagc caagcaaaac gccatttgcg taagtttaac
      301 ggcattccca aagtgcattt tgagctgtat ttgaaagaat gcgaatggcg ttttaatcac
      361 agtgacttaa aatctcaaat atccttttta aaacaattgg ttaagggtag tttaggttag
      421 ttatctagga cagccccttt tcttttattt aaaagagaaa gggctagata acgcccaaat
      481 cgcttttttc ctttcattgc tgttgttttg taatcaggca ttggcaattt tagccggcat
      541 ttggggggat cgctacggct tggcaaaaat gatgttattg ggctgtttat tagatgtggt
      601 tgcctatatg ctgtttttag cagcggataa ttacctcatt ttattgttgg caaccacttg
      661 ctttgggttg gggagttgct tattcggcac taatgccaga gcctgtttac tggcgattgc
      721 cggcgatgaa tatgctgcta aaacccgttt acaaggcaaa tatctaaaag tcaccagtat
      781 gtcttcaatg ctcgccccgc tgattattat tccgtttatt aggtttgaga tgattgaaac
      841 gctgatttgg atctgcttta ttttggaagc cggcttgttt gcgtttatgg tcaagccgtt
      901 ttattcggtg gaaggcgtga atggcggcgt gaaatttcgt ttcgcacaaa ttaaggaaat
      961 catcaacaaa gagtttttgt tcgctcactt aatgctattt gtgccgctga gtgatttttc
     1021 cgtatttatt cgacaatgtc ctgcacgcac cggagcattc gccgattgcg ttattcatca
     1081 acggtgtttt aaccgtcagt ttgcaatcga ctttttctcg taaaatcaac ctcaccaaac
     1141 agcaattaat ttggatttcg ccgttattag cggtggcgat tattgcccct tggtttattg
     1201 cggtaaaagt cgcaactctg accgctgcct atatttacac cgtgattttt acggtggtgg
     1261 aagtgtacgc cctcacagca atggcaaatt tactggtgaa attcgacaac ggcaaaaacc
     1321 gaggctttat ttttggctca tcgaggctga ttttatcgat caccacaatg atgacaatga
     1381 atttagtacc gcttgtcttt ttggtgtaaa caagcggtcg gatttagtgg atttttttgc
     1441 aaatgaaagg aatcgtttaa tacaacacgt ctgccagcca tagtctgaat tttaagctca
     1501 aatagctagt gtagccggtg gtgtggtggg cgattttacc gtctttgata atcaagatgg
     1561 ttggggtggc ttgaatgttc caacctcgag agaaatcacc gcttgggtca ttcaaagtag
     1621 cgaaagtgta gccattttca ttgagatagg cttgtacgtc attttcatcg ccggatttca
     1681 gggcaacacc taaaacttcc gtgccgtcat tcgctaattg ttggatattt ggcgaaacca
     1741 cttggcaata gtggcaccaa cttccccaaa aatagagtag catcggcttc tcgtggctta
     1801 attgggcgat tactttcggc tggtgttgaa tatcataatg cacggtttgc tcaaattgtg
     1861 ccggagcgga gggcgagcga taccaatcaa ccaccaggct aataatgata aacaggctgc
     1921 cgtagaggaa aatattttta agtaagcgag atatgagtga ttttttctgc ataatatagt
     1981 tatcttaaat agcaaaaacc tgtgaaatgc ctccacaggt tttttatttg agtttgatta
     2041 gagaatatca agcaattcca cttcaaacac taaggtcgca aatggtggaa ttgatgcttc
     2101 tgcaccacgt tcgccgtagg ctaattcttg tggaatggtt aaacgccatt ttgagccaac
     2161 cggcattaat tgcaatgctt ctgtccaacc acgaattact ccgtttaccg ggaattctgc
     2221 cggctgaccg cgttttaccg agctgtcaaa cacggtgccg tcaattaatg aaccggtgta
     2281 gtgaacacgc acggttgaag tcgcagtcgg tttttcgcct gtgccttcgg ttaaaatttc
     2341 atattgtaaa ccgctgtcgg taacgattac accgtttgct tttttattct cttccaagaa
     2401 cgctttgttt tcggcatcaa tcgctttgaa tgcttctgct tgagccgctt ccgcacgctg
     2461 acctaattct tgtaatgcag cggtcacttc attgatgtcg attgccggct cattgttgtt
     2521 taacacatca taaataccac gggcaacggt ttctgcgttt acgtccattc cgctgcctaa
     2581 aagttgctga ccaatttgta aaccgatgcc gtaaccgcct tttgcttcta ctgaatctaa
     2641 tccaactgaa ttgaaatcta atgccatttt ctgttccttt tgagtttatt gaatactgta
     2701 ttgaaagaaa tacgattcac ttaatggggg tgaaatttaa gaatacaagg tgtgaaatga
     2761 acaagcggtt atttttctgc aaaattttgc aacaaaataa ccgcttgcag aacattagaa
     2821 agttaaatat ggagcaactt tctcaatggt tgcatcgcca atgccgggaa tgttcgccag
     2881 ttctgctgca tttttgattt taccgtgttt tttgcggtat tctacaatcg ctttggcttt
     2941 tgcttcacca atgccggtaa gcgattgtaa ttgctcttcg ttggcagtgt tgatattcac
     3001 tttttgtgat tttttcactg ctgacatttt ttctgttgca gctgctttca ttgaggccgc
     3061 tttttcagcg gttgcggttt tggctgaatt taaggtttca tgagcagttg cagctttctc
     3121 tgcggtggcg gcttttgctt cctgagcttt cactttcatt gtgtcgcttg cagatgcggc
     3181 tttcgcttta atcacgtccg ttttttctgc tgtggtggct tttactgcgt ccattttgtt
     3241 tttagcggaa tctttaaatg attcggtttt ggcttttgct atcgccattt tttccgcaga
     3301 accggctttt aactccgctg ctttctcttt tgttgcttct ttagccacag ttgctttttc
     3361 ggcaacagag gctttaactg cgttcatttg ttcagccgca gtaggttgag tggtttgtgc
     3421 aaatgaagta gctgaaacag ccattgccac gcccaatgct aataatgttt ttaatgcttt
     3481 tattgaaaat ccttaaatat aaaagaggga aaataattga aaaaaactgt attttaagac
     3541 tgaggcttta gataaaagtt caatcggtag gtataaatgg ctcggttgtg gttaaaacaa
     3601 ccgagtattg aggctcacta gagaagtaac atactgcccc atttgataat atcgaagaag
     3661 aatttattat cattggtggc aactttatcg cctgatttcc cttcttggct attggtttct
     3721 tcgatcatac cgctttgata ctgccctttt accactgcca aatcattttt tgcattggtg
     3781 cgtaaggtcg cacattgttt tttcggtaac gcttcaaccg cttcgttatt tttcagtttt
     3841 ttgaataaat attgagcgta acccattgat ttttcatcat tttgaatgat ttttacatac
     3901 tgctccccga taatctcttc aagcggatag aaaaatacat attgtgagaa aatataagaa
     3961 tcttctttgg aaaaatgctc ttgctgaata cgggttaaat tggggtagat acactgtttt
     4021 gcctgttcgc tggcaattac ccatttttga gcattttctt ccgaaagcac ataatcggca
     4081 ttggcaaatt cgcccgggaa tgcttccggt tgttgcggtt cattgctgct acaagccgcc
     4141 aataataagc ctgtagaaag tagcactatt tttcttaaca ttctgacctc tgttttaaaa
     4201 atttggtgca ttgtaacaaa aaaacagcgg ctgaccattg caaattttca gcgaaaaatg
     4261 accgcttgtt tttatccctt ggctgaatct gttaaactat cagcaatgat ttctcacaat
     4321 aaatagactg atgacacaag atttctccac ccatacgcca atgatgcaac aatatttgca
     4381 actcaaagct caaaatccgg acatactatt gttttaccga atgggggatt tttatgagct
     4441 gttttatgat gatgcgaaac gagcggcagc attgttggat atttcgctca ccaagcgagg
     4501 gcaatctgcc ggtgagccga ttccgatggc gggtgtgcct tatcacgcag tggaggggta
     4561 tttggcgaaa ttggtggcgt tgggggaatc ggtagcaatt tgtgaacaga ttggcgaccc
     4621 agcaacctca aaagggccgg tagaacgcaa agtggtacgg attgttacgc cgggaacagt
     4681 tagcgatgag gcattgttac ccgaacgcca agataacttg gtggcggcag tttacgaaga
     4741 aaaaggcaca tttgcgattg ctacgctaga tatgacctcc gggcggtttt taatcagtga
     4801 acttgctagc aaagaggctc tatccgccga gttacaacgt gtacaaccgg cagaaattct
     4861 gtatgcggaa gatttttccg ctgcctcaat tttaacgaat tacaaagggt tacgccgccg
     4921 tccggtgtgg gaatttgagc tggtaacggc gattcagctg ctaaatcgcc aattcggcac
     4981 gcaaacactt gccggatttg gggtggaaaa agcggtggtg gcactttgtg ctgccggctg
     5041 tgtcttgcat tatgcccaag aaacgcaacg caccgcttta ccgcacatta acgcaattca
     5101 tttggcacaa catagcgata ctattttgct cgatgcagct actcgtcgca atttagagct
     5161 gacccaaaac ttagcgggtg gcacggaaaa cacgctggcg gcggtgttag ataaatgtgt
     5221 gaccccaatg gggagccgtc tgctcaagcg ttggattcat cagccgattc gagattgtgg
     5281 taaattacaa gcccgacaaa aggcgataac agcattgata caatatgagc gaatgtcgga
     5341 tttacagccg ttattacaac aagtcggcga tatggagcgg attctcgccc gagtggcgtt
     5401 gcgtacggct cgccctcgtg acctcacccg actacgcact gcattggctc agttaccgga
     5461 aattgcaaaa aattcacaaa atctgaccgc tagtatcgat cagcttttgg ctcaactggc
     5521 ggatttcagc ccgttacacg atttgctgga gcgggcgatt atcgaaaacc caccacaact
     5581 cattcgtgat ggtggggtga ttgcagaagg ttataatgcc gagcttgacg aatggcggca
     5641 actttcggac ggggcaacgc aatatctgga aaatttggag atcagagaac gtgaaagcac
     5701 cggcattgat tcgctgaaaa tcggctttaa tgcggttcac ggctattaca ttcagatcag
     5761 ccaagggcaa gcacacaaag ccccgattca ctatgttcgc cgccaaacgc tcaaaaatgc
     5821 ggagcggtat attatccctg agctgaaaac ttacgaagac aaagtgctga aagcaaaagg
     5881 ggcatcgctt gcccttgaaa aacagcttta tgatgaactg tttgatgtgt taatgcctcg
     5941 cttaggcgaa ttgcaattag cggcgatgat gctgtctgaa cttgatgtct taaccaacct
     6001 tgccgagcga gctgatagtt taggctatgt ttgcccgagc tttagcccga tgcgaatggt
     6061 gaatattaaa ggcggcagac acccggtggt ggagcaggtt ttaaccgagc cgtttattgc
     6121 caatccggtg tttttaaatt cccaacggca tttattgatt gtgaccggcc cgaatatggg
     6181 cggtaaaagc acctatatgc ggcaaattgc cctcattaca ttgatggcgt atatcggcag
     6241 ttttgtgccg gcagaaagtg cggaaatcgg cccgattgac cgtattttca cccgaattgg
     6301 ggcaagcgat gatttagctt cagggcgttc aacctttatg gtggaaatga ccgaaatggc
     6361 gaatattctg catcaagcca ccgaaaacag ccttgtgctg attgatgaaa tcgggcgagg
     6421 cacttctacc tatgacggct tatcactggc gtgggcgtgt gccgaatggc tggcgaagaa
     6481 aacccagtca ctcactttgt ttgcaaccca ctattttgaa cttaccggct tgccgaatca
     6541 gctcaaaggg gtggcaaatg tgcatttaga cgcgcgtgaa catcaagaca gtattgtgtt
     6601 tatgcactcg gtgcaagagg gggccgccag caaaagttac ggcttggcgg tggcagcctt
     6661 ggcgggtgtg ccaaagcaag tgattcaact ggcaaagcag cgtttggcac atttggagga
     6721 aatttcccac caaaccaaac aagcaaacga acatccacag gcggatttgt tgttttccga
     6781 tggttttgat ttgcaaaaaa atgaagcaat tcaaccgctt gtagtagaaa atgaagttga
     6841 aaaagccctg aaagcccttc agcctgatga acttacccca agacaggctt tggacgagtt
     6901 gtatcgcttg aaaaaattgt tggggtaaat tgaaaaaata actaagaaat cgccccgttt
     6961 aaggggcgtt tttgtttaga acgtatgtga aaactcaata tagacacggt ttttgtcata
     7021 actatagaag ctatgattgc tttttacctt gttatattgc cacgttaagc gaggggtaat
     7081 acccttaaaa tgcaaggctc tgtgccagat gctggcttgc acaccatatt cactgttacg
     7141 ttgtgtaatt tggaaaatcg gcattggggc tcggtattgt ttgcgggcgt agctggcact
     7201 taattgggtt gaaagcccgt ttttccactc ttgtccccaa ccaatagaaa cacctcggcg
     7261 aataaagcta tcatctaaat cacgggggct ggtgcggtta aaattcgccc ccacaaacca
     7321 atattgccgg ctgttagggt aaaaatagag gctcggggca ataaaatgat aattgccgtc
     7381 taaatgttgg cggcgagtgt aacgctgttc cgcatattcg tagctgattg cagattgcca
     7441 ctgtggagta atccaatatt gccagcgggc attcacaccg cctgcgttgg agtagcgttt
     7501 ggtgctttcg gtttggcttg agccaccggc ataccacatc tgctcaaaaa acggcaacaa
     7561 ggtgattttt tgttttgcat tttgataacc caagccgagg ctttctctga gcgaatattc
     7621 gttatatttt ttgttattcc agtaatattt gccgtttccg tttaaacgaa actcgtggaa
     7681 gaaaccattg ccccaagacc actttttatc cgcctcaaag tgaaagccga ccccttgggc
     7741 ggattctttt ttcggtgcag tccagttgcc ataggtcgtg cctgcatttg gagcattgtt
     7801 gatattcggg tcattcaaat aggttaagcc gccttgaaaa ctccattgat cttgcttgcc
     7861 aatcgcctcc aaatagctat tgaccgcatt tgcaatttct tgcggtaatt tgtccgcttg
     7921 taacttataa aattgagcct ctgcggcttc attttcccga ttttcaaaca atgcaaccgc
     7981 taattgcata cggattggct gattttcagg gtattttgcc agtagctgac ggtagccttt
     8041 tattgcctct gaataatttt gttttgcttt ggcattaact gcctccgccc attgtacaac
     8101 ttcgctgttt tgtttactgg cgggtaattg ttgataaata ggcagtaaga attgaacatt
     8161 ctcagtgtgg ttagtgacca acgcagttag cattgccgag ttgagcaact caggctgttg
     8221 aagcagctgt tggcttgaaa tagagatcga ttgccggtga gcctgtgcat taaccgcttg
     8281 tggtttggct tgaggttcag gcttttctaa tgtatgtagg tttttctgca ttcgctggtt
     8341 atccattttt tcttgaagtt gagccggtgt ggtttccgca aatgccaggt ttgaggtaag
     8401 gattaaaagc gttgagacta tttttttcat aaagctatct tttatttgaa tagaaaaggc
     8461 tatttttcaa tagcctttag tgaagagttt tgaggttgtt ttgctatatt tttcattaag
     8521 ttaaatatat agctttaaat atacctacta tatgctacta aataaagtat gcaatatttg
     8581 ttatgctttg taaataagag gaaagagatc cattttgggt agaaaatagc tcattgcttg
     8641 gaactttaaa tggttatttc accaattcaa ccacttcctt cgtcaatttc ccaatctcct
     8701 cccacttctg ttccttaatc agggatttct ccacaaacca agagccgccg caggcgacta
     8761 cgttgggaat ggcgaggtag tcgttgatgt tttgtggcga gatgccgccg gtcggcataa
     8821 tctgtaagtt gccgtaaggg ccgagcaggg ctttaatcat tttcacgccg ccactggctt
     8881 cggcagggaa aaatttaact gcttgtatgc caagttcgag ggcggcttca atcgccatcg
     8941 ggttgttcac acccggtgta acaggcaaac ctaacacttg gcaatactta acgatagtcg
     9001 gattaaaacc cggagtcaca atgcaatccg ccccagcgtt tttggcagtt aagacttgct
     9061 ctttggtcag cactgtgcct gctgcaatca atacttccgg atagttggct tgcactaatt
     9121 taattgcctc ttcagctgct tccgagcgga aagtgatttc caccaccggc aaaccgtttt
     9181 cggaaagggt tttcgccagc ggtaaaatat cttctgcttt atccaaagca atcacgggaa
     9241 caactttcag ttgtcttaat ttttcaatga tttgttcggt ggtgtaacgc atttctagcc
     9301 tcattatgtt gtattgcaag cggtcgcttt tgtaaaaaat tttgcaaatt taaccgcttg
     9361 tcgttgtgct attgttggtc taaatggatt gttcaaactg cgatttcaaa tgagtagtgg
     9421 cggatttggc aataatcgcc cctttgtgct gaatgacgat accggcaacg gcatttcctt
     9481 gttggcaaca ggtaacgaca tctttaccca ataagtaacc gttaaggaag ccggcattaa
     9541 aggaatcgcc ggcggaagtg gtatcgacca ccttctctac cgcaacagtt ggcacaaaag
     9601 tacgctcccc gttttgcaac accgttgccc ccagagagcc ttgtttcacc acaatggtct
     9661 gaatgccata ttgagtgaga cggtcaaagg tggcttgctc attcacatcg ccccaaagca
     9721 gttgctcgtc atcaaaggtc acgagagcta aatcgactaa ttgcaacagc tcggcatagt
     9781 gagcttgggc agcagccaca ctttcccaca gtttcggccg gtaattgctg tcaaaggcga
     9841 ttttcacccc ttgtgttttg agctcacgca actgtgcaat cagcaaagtg cggtcgtttt
     9901 ccggcaagat ggcaaggctg ataccgctca agtaaaccat atctacctcg tttagtgccg
     9961 agagtgcttt gggatagccg gggtgttgca acaaataacg ggcggcagat tgatttcgcc
    10021 aatagaggaa cgttcgctcg ccctgtttat ccaactgaat cagatacagc cccggctggc
    10081 ggtgctcgtc acgcaacaca aaatccgtgt tgatattatc cacctgccac gccgctaaca
    10141 ttccctgact gagcttatcc gtgccgagag cggaaatata acgcacctca atctgttcag
    10201 gcgaactcac ccgagccaaa taggtagcgg tgttgagcga atccccacca taggtttggt
    10261 gcatctcccc aaacggctcc ccgtttaact caatcataca ttcaccgaga atggcgagtt
    10321 ttttcatagg aataccttct aagttacacg ccgctataag cagagaatcc gccatcaaca
    10381 ggtaatacaa cgccattgat aaagctggaa taatggtgat ccattaaaaa taggattgca
    10441 cctaccaatt catcggcttg tccgaaacgt cccatagggg tattcgtgag gattttatta
    10501 gctctagctg ttggcgtacc atcggcgtta aatagtagag ctttattttg attactcact
    10561 aaaaatcccg gtgcaatagc attacagcgg atacctactt ttgagaaata aactgctaac
    10621 cattgtgtaa agttactgat tgcagatttt gctccagaat aggcagggat tttagttaat
    10681 ggagtaaagg cattcatact ggatatatta atgatattag cgccctcttt acccaacata
    10741 tcttttgcga aaacctgtgt tggtaatagt gtgcctaagt aatttaaatt aaatacaaat
    10801 tcaatccctg ctttatctaa ttcaaaaaaa gattttgtat tttccggtaa gttaatatcg
    10861 tgaaattcat tatctgtcgt tgcttttgga ttattcccac ctgcaccatt aattaaaata
    10921 tcacaagtgc caaaatcttt tagaatttca tctcttgcct gttttatgct ttctaattca
    10981 agtacattag tttggtacgc tttcgcaata tagccttcat cggcaatttc agaagcaaaa
    11041 ttctgtgctg cttctagatt gatatcgagt agtgcaactt ttgcacctgt ttttgcaatt
    11101 tcttttgcaa aataagcaca tagcacacca cctgctccgg taataacaac aactttatct
    11161 ttaaaattat gattttgggc aatagacata ataagaactc ctaagataac caattcattg
    11221 gtacgataat aatttcaggg aaaagtatta ataagaacag tattgcagca tagactagca
    11281 agaatggata gatacctttg gttaatctag caataccaat ttttgctata ccagaaccaa
    11341 catataatac cgttccaaca ggaggcgtaa ttaaaccgat agataggtta attaccatca
    11401 taataccaaa gtaagcaata tcgatgttat acgctcttag taatggtaat agtactggta
    11461 caaaaattaa tactgctggg attaagtcca ttacacagcc gactaataat aagaaaatca
    11521 taatgacgaa cattagtaca gtcgggctat cggtaatacc tttgataaac tcaactaact
    11581 ccataggtat ttgagcaaca gtaactgcaa atgcagatat cattgccgcc gctgcaacaa
    11641 acataaccat tgcagttgtt ttgatagtgc ctaagaaaac atcttggatt ttatctaagg
    11701 ttaacccttt taagataatg ctgattattg ctgcataaat tgctgctaca actcccgctt
    11761 ctgttggtgt aaagatgccg cctcttaaac ctacgataat aataattgga agtagcaatg
    11821 gtaagaatgc tgatttaaat gcagcccaac gttctttacc tgtttttttc ggttcaacgg
    11881 tttgttcttc gtttcggtat aagaatttcc aaactaacca taaacctaaa accattaaaa
    11941 agcctggaac cattcctccc ataaataatt tggtaattga tgcaccggct gtaataccat
    12001 agacaatcat tggaatgctt ggtgggataa ctacagaaat aatacctgct gcacagatta
    12061 agcctgttga acgtgcaaca tcatattttc ttgcaaccat catcggaata agaattgcac
    12121 cgagagccgc ggtatcagca acagcggagc cggataaacc tgcgaaaatt aagcctgaaa
    12181 taatcactac atagcccaat ccgcctttaa tatggccgac catgctcatt gcaaaattga
    12241 taatacgttc ggaaataccg ccgtgtttca taatttcacc ggtcagcata aaaaacggga
    12301 tagccatcag cggaaaatta tttgtaccca ttacgaaatt ctccgtgatt aattgggcat
    12361 caaacatatc cattttccat agcataaaac tggcactaag tagcatagag agagcaacgg
    12421 gcactcctaa aaagagaaag aggaatagac ttcctaaaaa tagccataac atatttattt
    12481 ctcctcttta atgaaagcta gccgaatatg tttccataaa tttgtgaata caatagcgaa
    12541 ataggagata gatgaaataa ctgctgcaaa atatagaaac gcagatgaaa tttcagttgc
    12601 tggcattttt tgtgtgtatg tcaataacat taactggtat gcaccgtaag taataaatga
    12661 cagtgcaact aagactaaaa tatcagcaaa gaacagtaag tacatttgta cttttgccgg
    12721 tagtgcagaa acaacaatat caacggtgag gtgtcccctt tcctttgcaa cgaggattat
    12781 tcctagaaag atcatataga caaagcagat tctggcgaat tcctcagacc aagctattcc
    12841 ggagtcaaaa aaatatcgta aaaccgcatt aaaaaagact aggataatca ttgtagatag
    12901 agcaattatc gcaaggagtt tgagagttct atctaatgct gtagaaattt gcataaattt
    12961 ctccttcttc atttagatgg gcgacctctt ttatccggtc gcctcgctta ttgcttattt
    13021 ggctgcgtgg atttttgaaa taacatcttt agcccaatca tatttctgat agaaattttg
    13081 ataaagcgtt tcggatgctt ttaacatatc agctttaaat tgttcactcg gaacaatgac
    13141 ttctttgcca tttttgtgga agaaatcttt tacatcttgt tccatcttca tcgctaattc
    13201 ccactctttt tcttggtaga gttttgctgc ctctaagaag attgtctgat cttctttaga
    13261 cattttattc caagttttca aactaagttg tagtaagcca ggtgagaaaa tatgattaga
    13321 ttcaataata tatttttgca cctcgtataa accagaatct ttaattaaca tatatggatt
    13381 ttcttgccca tcaatgactt tttgttctag tgcggtaaat acttcactta aaggcatact
    13441 ttgagggtta atatgcattg cttttgccca gtccacaaac aacgaattta gtggaaccct
    13501 taatcgcaaa cctttaaatc catcaaaatt ctcaactttt ttattggaag agataacacg
    13561 gaagccattc ataccatacg ctagtaattt aatgccgtac ttctccattt tttccccgat
    13621 ttcttgagca ataggagatt ctagaacttt cttagcttcg gcattatctt taaatagata
    13681 tggccactcc catacgccaa aaattggatc aacattttgt agtaataaac ctgtaatgcc
    13741 accttcaatc gtgccattac gcaaaccatt tacaatttga tcttctcctc ccaactggtt
    13801 atttgggaaa atacggattt cgtagcgtcc ttctgttttt tcttcaatgg tttttttgaa
    13861 gtattcctgc aatgcgatat ttgatggatg aacatctgaa ttatagtgac caatcttaat
    13921 gatagtcttc gcaaatgccg aaccggtgaa catcaggcta gaaattaata gagctttagt
    13981 gaaagttttg agtttcatag ttattacctc gtaggtgagt tagtatttaa aatacagcga
    14041 tgatttttaa gtaatcatca ggattagctg agagttcttc gatatagtga ggtatttcat
    14101 caaatgtaat taccttacta atgatatctt ttggttcaat tcttcttgat gccagaagct
    14161 ctaatgcttc ttcaaatgcc cccttgcttg ttcttgcccc ataaatatta agttctttga
    14221 aggtgattaa attagttggt aatggtgttt ctgttttcgg ccatccggtt aaagcaatac
    14281 gtccagcaaa agaggtgtat ttaagcgtat tttgtactgc gacatttgct cctgacgctt
    14341 caataaccac ctctgccatt cttccattgg taattgattt aatagcttca agatcgtttt
    14401 cttttgttgg attaattgtg tgtggaatac caatagattt tgcgtaatcc aatcgcttat
    14461 ctaaaatgtc aattaaaatc ggcgtcgctc cataagcttt ggcaaccaat gcagccatta
    14521 gcccaattgc ccctgctcca atgatagcaa catgttcacc agctttgact tttgttctat
    14581 gaattgcgtg taaggaaata gttaagggtt ctgctaacgc taattcgtgt attggcatat
    14641 caggtgtttt gattatcata tgggctggat gtctaacaac ctcttgcatt gccccatcaa
    14701 tatgtacccc caatactttt agagattcgc aacaatttgt tctaccaatg gagcagggat
    14761 agcaatgtcc acaatagatg taaggttcaa tgatgacacg atctcctaca ttaatattat
    14821 ttggcatacc tttaccagac tcaattactg tgccaacgat ttcatgccct aaaattctag
    14881 gataagtaac aagtggatta gtgcctctaa atgctccaat atcagagcca catatcccca
    14941 taccttctac tttgattagc acatcatttt cacctttaac aggataagaa acggtttgta
    15001 taccaacttt attaggttct acaagacata ctgatttgag tggtttttcc atgattttgt
    15061 ccttttttga taaagttaat cgacattttg tagtgtcaat ggtattttat gcacagatac
    15121 taacaccaaa aaacaagttt ggcattccaa tttttgtgat tttgtgaacc tgatcacaaa
    15181 aatgaaattt tggaattcca atttcgtgag gatttatgca aaatagttcc agaacttaca
    15241 ctaaaatagg aaaaattctc aaagaggaaa ttgctcaagg aaaatacaga gtaggagata
    15301 agttacctac tgagagagat atttctgaaa gatttgaagt gagtagaact atcgtaaggg
    15361 aggcgatagt gatgctagaa gtagaaaagc ttattgaggt aaaaaaagga tcgggcgtgt
    15421 atgtcattag agtcccggag ctttttccag aagattttcc agaagagaaa gataatgagc
    15481 taagggatgt tgggccattt gaactacttc aagcacgaca attattagaa agcagtattg
    15541 ctgagtttgc agcacagcag gctaccaaac aagatataca agtacttcgt aacatattag
    15601 aaagtgagaa gaaacttttg ttagagaaga tggatgacta cagtgcagat aaggaatttc
    15661 atcttgcatt agctcatatg acgggtaacg atgttctgat tcaattacaa gaacagcttt
    15721 ggcgataccg ctttaatagt gcgatgtggg ctcagctaca ctccagaatt ttacagcatg
    15781 atcatcacca cttgtggata gaggatcatg agcgaatttt aaatgcaata cagagaaaaa
    15841 atcctgcatt agctcgtaaa gcaatgtggc aacatctaga aaatgttaaa actaaattgc
    15901 ttgaattgtc tgatgtagag gatcctaaat ttgatggata tctattcaat gtaaaccccg
    15961 ttgtagtagg tatctaaaac ctaaactaca caatgaggag tttactatgg aacaagcatg
    16021 gcgttggtat ggaccaaacg atccggtatc tttagatgat gtaagacaag caggggcaac
    16081 ggggattgtg acagcgttgc accatattcc caacgggcag gtgtggtcgg ttgaggaaat
    16141 taataaacgt aaggcattat tagctgaaaa agggctggtt tggtcggtgg tagaaagtgt
    16201 gcctgttcac gaagaaatca aaactcaaac aggcaactat cagcaatgga ttgataacta
    16261 taagcaaacc ttgcgtaatt tggcaagctg tgggattgat acggtgtgct ataactttat
    16321 gccggtgcta gattggactc gtaccgatct ggagtatgaa atgcctgatg gctcaaaagc
    16381 attgcgtttt gaccaagtgg cgtttgcggc gtttgagtta tatatcttaa aacgcccggg
    16441 agcggaagcc acttactcat cagcagaaca agccgaagcc aaagcctatt ttgagcagat
    16501 gagtgacgct gatattgcaa aattaaccaa aaatatcatt gccggtttgc cggggtctga
    16561 ggaaggctat acgctcgaag aattccaagc acagcttgac cgctatcaag ggctctcggc
    16621 tgaaaaattc cgtacccatt tagcctattt cttaaatgag attgtgccgg ttgcacaaga
    16681 ggtgggcatt cgtatggcga ttcaccctga cgatccgcct cgcccgattt taggcttgcc
    16741 acgcattgtt tcaaccatag aagatatgca atggtttgtg gaaactcaac cgcttgcagc
    16801 caatggcttc acgttctgta ccggttcata cggcgtatta gccgagaatg atttggtcaa
    16861 aatggcagag cagtttgcag atcgcattta ttttgctcac ttacgagcta cccaacgtga
    16921 agaaaatcca caaagtttcc acgaagcgga tcatcttgcc ggtgatgtcg atatgtttgg
    16981 cgtggtgaaa gcattactta ccgaagagta tcgccgcaag gcaaatggcg atcaccgatt
    17041 aattccaatg cgtccggatc acggccatca aatgctcgat gatctgaaga aaaaaaccaa
    17101 cccaggctat tctgcgattg gtcgtttaag aggattagcg gagttccgtg gattggagtt
    17161 ggcacttaag aaagtctatt ttaacgatta gccttattta ttataatgcc ctctactgta
    17221 gagggcattt tatagtttga tatgttcaaa aaatatttcg gcgaaataat cctttttctc
    17281 gttaccttta ttgctgcagc ggggtggttt ttctctaaac acgctttagt tggattaccg
    17341 cctattggct ttatgggagg gcgttttata ttagcctctt tgattcttct gcctttttct
    17401 taccgagagc tgtatcgttt agataaggtt caagttaaat attcggtgat taccggtctt
    17461 acttacggaa tttatactat tttttgggta ttggggctgg cttttagtac agtgtttggt
    17521 gaaggggctt ttttggtgag ccttgcgatg ctgattgctc ctttgctctc ttggttgata
    17581 ttcaaacata cgccaccgaa gattttttgg ttagccttac ccattgcatt aagtgggctt
    17641 tactttcttt ctgcggagaa aggcatcttt catttttcct taggcagtac gatttttctg
    17701 gtgtcatcag tgtttggggc gttatatttt gtgttaaata atcaatacgc caaacaagtc
    17761 tcattgtttc cattaattac tatccaattg gcgatagtcg gtgcggtctg tagcttgtat
    17821 tcctatttta tggaaagttg gcatttcccg attctcaccg aagtgtggct ctggtttgcc
    17881 gcaagtgtat tgattgcgac aaatttacgt tttttaatgc aaacactggg gcaaaaatat
    17941 tgccatattg gtacttctgc actcattatg ttacttgagc cggtttggac attgttattg
    18001 agcgtgatgt tattggggga acaacttagt gcgacaaaat ggctaggttg cagcttgatt
    18061 ttgatagcat tgattattta tcgactccct attctacgac tcaaaaaata ggtaaaacaa
    18121 aagcaaatat gccatagtat tggaagcagt taggcatttt agagtaagta acaagcggtc
    18181 atttttgcaa aaaatcttgc aaaaatgacc gctttctttc ttttatccgt tcaatctatg
    18241 ttaaaattct acatttttat aagatgagag agagaaacgt ggaacagaat ttagtcgaat
    18301 ttttaaccaa aaccttagat gatttaaagg cacaagatat tttagccatt gatgtgaaag
    18361 ggaaatctag cattactgat acgatgattt tagccaccgg tacatcgagc cgtcacgttg
    18421 cttcaacggc agagcgttta attacggaag caaaacaggc tgggttcgag gtatttggag
    18481 atgaaggtaa agcagttgcc gattggatcg tggtcgattt tgggaaggca atggttcact
    18541 tgttgcaatc cgatagccgt gagatgtacc aattagagaa actttgggcg tagcagttca
    18601 ataaggaacg acaagcggtg atttttgcaa cattttttgc aaattaaacc gcttgtaagt
    18661 gaaagagaga tgaaaattca attaattgcg gttggcacta aaatgccggc gtgggtaacg
    18721 acagggtttg aagagtatca acgccgtttt ccgaaagaga tgccgtttga gttggtggaa
    18781 attccggcag gaaaacgggg caagaatgct gatactaaac gcattcttga gcttgaaggc
    18841 aaagcaatgt tggcggcagc gggcaaggca aaaatcgtga ctttggatat tccgggcaaa
    18901 gcgtggacaa ccgagcagtt agccactcag ttagagggct ggaaaaacga tgggcgagat
    18961 gtagcgttat tgattggcgg cccggaagga ttatcaccgg aatgcaaagc cgctgccgag
    19021 cagagttggt cgttgtcgcc tttaacctta cctcacccac tggtgcgggt ggtggtggcg
    19081 gaaagtttgt atcgggcgtg gtcggttacc attaatcacc cttatcatcg agagtagtga
    19141 gtcattttag atagtgttat atgtttggta aattagcaaa attcacagct tcaaaccagc
    19201 gagaaaaggt gcgagacggg caggcagaaa gcaatctgta tgcccgccgt gccttagttg
    19261 cgtttctggg ggtgttggcg ttaagtggtg ttttattaac caacttgtat cacttgcaag
    19321 tggtgaatta tgaggactac caaacccgtt caaacggtaa ccgcattaaa ttgttgcctg
    19381 tgccaccggc tcgaggctta atttatgacc gtaacggtaa agtattggcg gaaaatttaa
    19441 cctatttcgg gctgtttatt gtgcctgaaa agacggaaaa cattgagcag actttaaccg
    19501 agttgaagga tattgttggg ctgacggacg aagatatcga gaattatcat aaagagaaaa
    19561 aacgcagttc tcgctatacc ccaattatgc tcaaaggcaa tttgaatgag gctcagatgg
    19621 ctcgttttgc ggtgaaccaa taccgttttc caagtttaga tgtgcaggcg tattataagc
    19681 ggaattatcc ttacggcgag cttttaaccc atattatcgg ttatgtggcg aaaattaacg
    19741 aaaacgataa gaaaaagctg caagaagccg ggaaattcag caattatgcc ggttcgcacg
    19801 atatggggaa attggggatt gaaaaattct atgaagatca gctccacggt gtcaccggtt
    19861 ttgaagaggt agaaattaat aaccgaggga aagtaatccg taaattgcgt gaccaagcag
    19921 gggttgccgg tagcagtatt cgcttgagta ttgatgtgga attacagcaa tatgtgatgt
    19981 cgttaattgc taagcataaa ggggcggtgg tggtgcttga ccctcgtgat agcagtattt
    20041 tagcgatggt ctcaaaccca agttatgaca ataatttatt tgtgggcggt atttcagggc
    20101 aggattataa agcattattg gacgatccaa cccgaccact ttatagccgt actacacaag
    20161 gcacttatcc accggcttca actattaagc catttatggc ggtggcaggt ttggaagagg
    20221 gaatgattac cccttctacc accatttcag accccggcta ttggattttg cccggcacta
    20281 cacaacgtta tcgagattgg aaacgtagcg gacacggtgc aactaatgtg aataaagcaa
    20341 ttaccgaatc gtctgatacc tttttctatc aattagccta taaaatgggg attgataaaa
    20401 tgtcggattg gatgaaaaaa ttcggtttcg gagtgaaaac cggtatcgat atttttgagg
    20461 aatccgcagg ggtaatgcca acccgtgaat ggaaacaaaa acgctataaa aaaccttggg
    20521 tgcagggcga tactattccg gttgggattg ggcagggcta ctggatttcg accccgttac
    20581 agttggcgaa agccacggcg gtgttaatca acaacgggcg ggtgaataca ccgcatttaa
    20641 tgcttgaagt gcaaagcagt aattcggtta cgccgtatca agacccattg ttgtatgaag
    20701 atattaaagg cgtgccggat gtctattgga atttagcaaa acagggaatg tataacgtaa
    20761 accacgccgc aaacggtacg gcacgaaaag tgtttgccgg tgcattttat cattcagcag
    20821 ggaaaaccgg tacggctcag gtgtttaact taaacggtaa aaattacgat aaaaatgcga
    20881 ttaaaaaaga gttgcacgac cacgcttggt ttatcggcta tgctccttat gaacaaccta
    20941 aaatagtggt ggcattaatt ttagaaaatg caggcggtgg tggtagtgcc gcggctcctg
    21001 ttgctcgtca gattatggat tatgctttga gaaaaggcat tggtgaacag ccggattcgc
    21061 aaaattctga gcaaaataaa ccgcttgtca cagaggaaca tcatgaatag tggctttaaa
    21121 aaacttttct ggaaaatttt ttcactcgat ctccttttat tatcaggatt attagctatt
    21181 accggttatg gtttattagt actatatagc gcaagcggtg caaatgagcg gatgtttacc
    21241 agtagactga ttcaagtttc gctagggctt gggctaatgt tgataatggc aatggtacct
    21301 cctcgctttt atcaaaaagt ttcgccttat ctgtatattt tctgtctgat attattgatt
    21361 ttggtggatt tggtcggcga aaccagtaaa ggagcgcaac gttggttgaa tttaggattt
    21421 gttcgctttc agccttctga gattgccaag ctcgctgtgc cactgatggt agccacttat
    21481 ttaggtaagc ggccgcttcc tccgagtttt aaagatactt ttatcgcctt agccattatt
    21541 attgtgccaa ccttattggt ggcaattcag cccgatttgg gaacatctat tttagtgtgt
    21601 tctgccggta tttttgtttt atttttggca gggctaagtt ggaaattaat tggcgcaggt
    21661 gtggtgtttt tagccggttt tatcccgata atgtggtttt tcttaatgca cgattatcaa
    21721 aaaacccggg tgatgacctt aattgatcct aataaagacc cgttgggtgc cggctatcat
    21781 attattcaat ccaaaattgc gataggctct ggtggcatta atggaaaagg ctggatggaa
    21841 ggaacgcaat cccagcttga atttttacct gaaccgcata ccgattttat ttttgcagtg
    21901 ttaagcgaag agcatggtat gataggtgtg ctgattttat tagcgattta tttgtttatt
    21961 attgcccgag gtttagtgat tggcacaaaa tcggattctg ctttcgggcg tatattatca
    22021 ggtggtacag cccttctatt ttttgtttac gtttttgtaa atattggtat ggtgagtggt
    22081 attttacccg tagtcggtgt accattaccg cttttcagtt acggcggaac ctcctatgtg
    22141 acgctgatgg cggcatttgg tttgatgatg tcaacctatg ttcaccgtaa gcgtgtaggt
    22201 agtaataatc cttatgataa actgaaataa attaaacttt tgcttttttg cggtatcaaa
    22261 aagcagtgaa acgatcatcg ttacaaacaa taacgacatc cacatagagg aaaaaactta
    22321 tatgagatta ggtaaaattg taaccctgtt gttagctgga tttctgacat ttagttcatt
    22381 aaattctttg gctgcgacaa agaatacaaa agctaaatcg agtattttag ccaagaagca
    22441 agcaacttct aaagcaataa aaaaagtagg tatttctaaa gttaagaaaa aagaagtagt
    22501 ggctaaagct acaaaaaaga aaacaatttc tactgttaca actaagccga ttaaatctac
    22561 aaaaaagctg gctcgcaagg ttgtcaagaa aacggtaacc gctaagaaaa aattggtaaa
    22621 aaagcagcat aagccactgg tcaaaaaaca tttccagact ggtgttgcca gctattatgc
    22681 aaattacttt aatggtcgcc gaaccgctaa tggggagact ttcaataacg caaaaatgac
    22741 ggctgcacat cgaactttac catttggtac tttaattgaa gtgacgaatt tacgaaatgg
    22801 tcgttctgtg gtggtgcgtg taaatgatcg cggaccttat gctcacgcac gggtcttgga
    22861 tttatcatca gccgcagcga aaaaaatcgg tatgcaccat tcggggacgg caagagtgaa
    22921 aattgcgatt gttgataagt caaaattggg atcgactaat cagttttatg taatgaatta
    22981 atttaagagg gaatatgaaa aaaacattag tgaaagcgat gagcgtggta ggttttgcgg
    23041 tttcaagcat tgcctatgcg gatttaaaca ctaacttcaa tttatcggca ccccagatca
    23101 acgcacaaac ctatattttg atggattaca actccggtga agttttagtg agcctaaatc
    23161 cggatcaacg tcaatatcct gcatcattga ccaaaatgat gactagctac gtagttggtg
    23221 aagccctaaa atcgggaaaa gtgcaaaaca gtgatatggt gatagtcacc gaaaattcgt
    23281 gggcgcaaaa attccccggc tcttcattaa tgtttttaga tttaaacagc aaagtttcag
    23341 taggtgagtt gatgaaaggg ctgattatcg tctcgggtaa tgatgcctct gtggcgcttg
    23401 ctgaacatgt ttcaggctca caagcggcgt tcattaatga aatgaacaaa tatgcccaac
    23461 agtttggctt aaagaatact cactttacca ctgttcacgg tttagatgac cctgagcaat
    23521 attcttctgc tcgtgatatg gcgattattg gttcgcatat tattcgtgat cagccggaag
    23581 agtataaaat ttatgcggaa aaagagttcc aatataacat caaaaaacca caaccaaacc
    23641 gcaacggatt attgtgggat aaaaccattc aagttgatgg tatgaaaaca gggcatactg
    23701 ataaagccgg ctataactta gtcgcatcag caattaaccc gaatacacgt ttaatttctg
    23761 tagtgatggg cgtgccaact tataaagggc gtgaagtgga aagtaagaaa ttactgcaat
    23821 ggggctttgc gaactttgaa accattaaat ctattccggc agctcaatcg gtggcagagc
    23881 aaagtgtcta ttacggtgaa gtcaataaag tacaattagg ctcggtgcaa gatagctttg
    23941 tgactatccc gaaaggtcgc tcggcagatt taaaagcccg ttatgagtta gagaagaaaa
    24001 acctcgaagc tcctttagca aaagggcagg tagtgggtaa aatgatctac caacttgacg
    24061 gcaaagatgt tgcaagcact aacttacaag tcttacaaga tgtaccggaa gccggtattt
    24121 tcggcaaagc gtgggattgg attgccctta ctgtgaagag cttgttcgat taatcttgtt
    24181 atttgccttt ttatccccat ctagggagca atgcaagcgg tgtgattttg caaaaaattt
    24241 gcaaaatttc accgcttacc gttttagata tgaatgtata aaaagtgtag tggcgaaaaa
    24301 tttttcgccc ctcgaagaaa gaatagaaga aggatcaaaa atgtctcaac ccaaagcgat
    24361 aaacttacaa gatttacctc aagccaaatt aaaagatctg ctagagtttc cgtgccattt
    24421 cacgttcaaa gtggtgggag caaaccgaga agatttggtt gatgatgtgg tagtggtcac
    24481 gcaaaaatat gccaaaggcg attacaatcc acgtcagcaa aaaagctcaa aaggtaccta
    24541 taattccgtt tcgattgata ttgtggcgga aaatattgag caagtagaaa ctctctacac
    24601 ggaacttgcc aaaattaatg gcgtaagaat ggtattataa tgcgaggggc gaatgacatt
    24661 cgccctcaat ttttcaataa agcgatgttg gaaaatagaa aatgaaatta ataattcgcc
    24721 aactaggcat tcagccttat gaagaaattt ggcaccaaat gcaatctttc acagatagcc
    24781 gtgatgggaa taccgatgat gagatctggc tggttcagca cccggctgtg tttacgcaag
    24841 gatcggcagg caaaccggag catttgttaa atccaaccaa tattccggtg gtgcaaagcg
    24901 accgtggcgg tcaaattact taccacggcg aggggcagca aattatgtat gtgctgattg
    24961 atatcaaacg gctgaaatcc ttgggtaaag aagtgtcggt tcgagattta gtgactgccc
    25021 tggagcaaac cgtggtacaa acgttggcag aatatggcat agaaagttat ccaaaagccg
    25081 atgcacccgg ggtgtatgtg gacggcaaga aaatctgctc acttggttta cgaattcgaa
    25141 aaggttgctc tttccacggt ttggcattaa atatcaatat ggacttaacg ccttttcaaa
    25201 acatcaatcc gtgcggttat gcagggctgg aaatgtgcca attaagtgaa ctggttcatc
    25261 gccctgattt gcgttgcgaa gaggttgctc caaaattagt ggctcatttc agcacaattt
    25321 taggctataa taaccaacaa attattaaca attaggataa aacacagtaa tggctacatc
    25381 gacagctcaa acgacggcaa ctgctacagt gaaaaaaatg agccctttca aaatggaaaa
    25441 aggggtgaaa tatcgtgatg ccgccaaaac ctctgtgatt caggtgcgta atatcgaccc
    25501 ggatcaagaa ctcttaaaaa aaccggagtg gatgaaaatc aaactgccgg caaattcggc
    25561 aaaaattgat agcattaaaa acggtatgcg tcgccacggc ttgcactcgg tgtgcgagga
    25621 agcctcttgc ccgaatttac acgaatgttt taaccacggt actgcaacct ttatgattat
    25681 gggggcaatc tgtacccgtc gttgcccgtt ctgtgatgtg gcacacggca aaccgcttcc
    25741 gcttgacccg gacgaacctc gcaaagtggc agaaacggtg caagatatga aactcaaata
    25801 tgtggtgatt acctcagtgg atcgtgatga tttgcccgac cgtggtgcgg ctcatttctc
    25861 tgcgaccgtg cgtgaaatca aagccttaaa tccgcattgt aaggttgaaa ttttagtgcc
    25921 tgatttccgt ggacgtgtgg agcaagcggt ggcaattctc aaagaaaatc cacctgatgt
    25981 ctttaaccac aacctagaaa atgtgccacg tctctatcgt gaagttcgtc cgggagcgga
    26041 ttacaaatgg tcgttggaat tattgaaaat cttcaagcaa gagttcccgc atattccgac
    26101 caaatccggc ttaatggtag gcttaggtga aaccaacgaa gaaatcttgg aagtaatgca
    26161 agatttacga gaccacggcg tgacgatgct caccatcggg caatacttac aaccaagccg
    26221 ccaccactta aaagtggaac gttatgtgcc accggcagag tttgatatgt tccgtgagga
    26281 agctgaaaaa atgggctttg aacacgcagc ctgcggaccg ttcgtgcgtt cttcttacca
    26341 cgcggattta caagcgaaag gcgaattggt gaaataaaat cgataagggc gaatattatt
    26401 tgccctttgt ttttgtggtt tgcaaagttt tagcaaaatt aaaccgcttg taatctcttc
    26461 taatttactc ttctatagat aatttcgttg ttgcgaatta ttttcattga ctatttgtta
    26521 tagaaagtta caattcaact ttccatttct ttttggagtt ccaatgaaaa aattactatt
    26581 aaacagcgta tttgctgcca cattgcttgc ttttggtgca actgccaatg ccgaaattaa
    26641 aaccatcact gatgtattag ggcgtgaggt caaagttgat gtgcctgcta aacgtgttgc
    26701 actgactttc tattaccctg actatattgc ggtaaccggt gttgaaaatt tcgataaggt
    26761 agtagggatt tcacgagagt tttgggaaaa gttcaaccca ggcagttggg cattatttgc
    26821 agaaaaaatg ccaaatctaa aaaacattgc cgatcttggc tatgtgaata gtggtacttt
    26881 ttcaacagaa aaaaccatcg cattaaaacc agatgtgtta gtgctacctg aaattcaata
    26941 tcaagcgtta gccagtgaaa tttcacgcat tgagcaagct ggcattcctg ttgtagtaga
    27001 tttcaacaag caaactattg aaaaccatac aaaaagcgtg agagttttcg gtcagcttac
    27061 aggcactgaa gagagagcgg agaaaattgc caaagagtat gaagagggca ttgctgatat
    27121 tcagagctgt attgataatg caaaagtaag taagccgaaa atctatgctg aatttggtaa
    27181 taaaggcccg aaagagcata gttttacctt tggtaaaaat atgtggggag cgattgccga
    27241 aacggtgcga ggcgataaca ttagtgcccc gtttgtagaa aactgggggc agattaaccc
    27301 tgagcaggtg ttagtttcta aacctgatgt gattatgatt tcaggtacgg aactaggcaa
    27361 cgacactaac cctgagatta tgtcgatggg gattaatatt gaagaagccg atgctcaaaa
    27421 acgcttaaaa ggctttattg agcgtacagg ttggaaagag ttacctgcgg taaaatcagg
    27481 gcgtgtttat ggtttatatc atacagcttc tcgctcaatt tcagatttag cgagtgctca
    27541 atttatggca aaagcacttt atcctgaatt gtttaaagat atcgatcctg aaaaaacgta
    27601 tttggatttc cacaacaact acttaccaat tacgccaaaa ggcacattct ttatgcaact
    27661 gaaataaaaa taacaagcgg tcattttgca gatttatttt gcaaaatgac cgcttgtatt
    27721 cgcttttact atttgcggtt caaacagcaa tcaatattta aacatttgcg aagcgggcgg
    27781 ataatcggcg agccgtttcc atcatataaa atctcaatat tgacattata gagtctctga
    27841 ataatatcgc attccaacat atcacaagct ctgccttgtg cttgaatttc ccctcgctta
    27901 atagcatcac actatccgaa aattgagccg caaggcttaa atcgtgcagc accataattg
    27961 taattaggtt attcgctcga gtgtaggcat tcacatattc aagtaagttg atttgatgat
    28021 acatatccaa cgcactgaca ggctcatcta gcagcagaat gtgtggttta cgtagcaata
    28081 cttgtgcgaa cattaccatt tgccgttgcc cgccacttag ccgcataata tcttgatgag
    28141 ctagatgtga aataccgagt ttatccataa tatcaacggc ttcattgagt aattcatcgc
    28201 taatatacat attcaggcta tcaagttgcc ctaataaaat aacctctaag gcactgagtg
    28261 aggcctctac ctgtgtgtct tgtggcatat agccaatttc tttacgccaa ctatgcaagt
    28321 ggcttgaggt taatttatta ccgtcaaaat caattgtgcc ttgatgagca atttccccaa
    28381 atagagtttt aaggagagaa gatttacccg caccatttgg gccaagtaaa gtatagatct
    28441 tgccttgttc aaaatgtaga ttgattttat cagccaccac taa
//
LOCUS       DANLXO010000019        28138 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.019, whole genome shotgun sequence.
ACCESSION   DANLXO010000019 DANLXO010000000
VERSION     DANLXO010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28138
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.019"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1527)
                     /gene="der"
                     /locus_tag="PXD69_000718"
     CDS             complement(<1..1527)
                     /gene="der"
                     /locus_tag="PXD69_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDL6282939.1"
                     /translation="MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGH
                     ANIAGYDFIVIDTGGIDGTEEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPADVGI
                     AQYLRQREKTTVVVANKTDGIDADSHCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLA
                     PLGEQLNAEQFNQEQAGENAKNVANEETDEWDTEFDFENEEDAALLDEALAEEAEESI
                     EDKNIKIAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQQYTIID
                     TAGVRKRGKVNLAVEKFSVIKTLQAIQDANVVLLTIEAREGISDQDLSLLGFILNAGR
                     SLVIVVNKWDGLSQDIKDQVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSVKEAY
                     ACATQKTSTSMLTRILRMAADEHQPPLVNGRRVKLKYAHPGGYNPPIIVIHGNQVEKL
                     ADSYKRYLSNYFRKSLKIIGSPIRILFQEGNNPFAGKKNKLTPSQLRKRKRLMKFIKK
                     S"
     gene            complement(1712..3019)
                     /locus_tag="PXD69_000719"
     CDS             complement(1712..3019)
                     /locus_tag="PXD69_000719"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDL6282940.1"
                     /translation="MTILALGINHKTASVGLREKVAFVDDKRKLALEQIQTSGLAESV
                     VILSTCNRTELYFHQPNISPREESEENIQWREQCFRWFAQIHQLDESELRECLYFKQN
                     LEAANHLMKVASGLDSLILGEPQILGQVKQAYQYSEDFYQHQQKAMSTKLSRLFQRTF
                     ATAKRVRSETEIGSQAVSVAYAACGLARQIFDNFGKLRFLLVGAGETIELVARYLIQH
                     GAKNIMLANRTHIRAEMLAEKLNAPMQILSLSALQLGLNQADVVISSTGSPDTLISKE
                     MVEIAQKQRQFDPLLLIDIAVPRDIDEKAGDLEGVYAYSVDDLQNIIQRNMAQREEAA
                     KQAAEIVKEESKAFFEWLKQQQSSDLIKRYRQDAEQTRQELLEKALQAISQGQDSQKV
                     LSELSYKLTNQLLHAPTQALQAMAKSGNSTGLQSFSRALRLEE"
     gene            3273..5471
                     /gene="relA"
                     /locus_tag="PXD69_000720"
     CDS             3273..5471
                     /gene="relA"
                     /locus_tag="PXD69_000720"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HDL6282941.1"
                     /translation="MVAIRYSHQLEPNNFELSSWCASLNMSPVTFEQIHNAWSYAQEK
                     LDTDYSLMWYGIEMVEVLHGLNMDDDSLVAAMLFPLVKHNVIDLVQLKEDFSNDIKNL
                     VKGVLEMENIRQLSANNVSDLQIDNIRRMLLAMVDDFRCVVIKLAERIAYLRDSNHHS
                     EEDTVLAAKECSHVYAPLANRLGIGQLKWELEDYCFRILHPVSYTQIAKFELGERRVD
                     RERYIANFVADLTACLSPEIKNVQIYGRPKHIYSIWKKMQKKRLRFNQLFDIRAVRVI
                     VPTLEDCYTALGIIHTKYTHLPEHFDDYIANPKPNGYQSIHTVVLGEGEKTIEVQIRT
                     QQMHDDAELGVAAHWKYKEGATAGRSGYEEKIVWLRKLLEWQNDLADSGDMVAEMRSQ
                     IFDDRVYVFTPRGEVIDLPQKATPLDFAYAIHSEIGHRCIGAKVAGRIVPFTYHLQMG
                     DQVEIITQKEPNPSRDWLNPNTGFVNTGKARSKIIAWFKKLDREKNIPIGKEALEAEM
                     EKFGFTLKQIEEYALPRYNLKQFDDLYAGIGGGDIRLHQLMHFLQSKLIKPTAEQEDE
                     AVLKQVNKNTNQPKPSKGYVIVEGVGNLMHSIARCCQPIPGDEIVGYITQGRGISIHR
                     ADCEQLFELQSLNPERVVEADWGEGYTSGLSLTIRVIANDRNGLLRDVSAIMANEKVN
                     VLGVSSRTDVKRSLATIDMEIQLNNVEILNKLLARIAQLDDVIEAKRLSS"
     gene            5590..6786
                     /gene="ispC"
                     /locus_tag="PXD69_000721"
     CDS             5590..6786
                     /gene="ispC"
                     /locus_tag="PXD69_000721"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDL6282942.1"
                     /translation="MKKLVILGSTGSIGKSTLSVVEHNPNPNQYEVFALVGGKNVELM
                     LEQCRQYQPTFAAMDDEKSAQALKTALATLGSKTEVLAGQAAICELAAHSEVDMVMAA
                     IVGAAGLLPTLSAVKAGKTVLLANKESLVTCGQIFIDEARKSGAKLLPVDSEHNAIFQ
                     SLPPEAQQKVGFCPLAELGVSKIILTGSGGPFRTKPLNEFDAITPAQAVAHPNWSMGK
                     KISVDSATMMNKGLEYIEARWLFNATAEEMDIIIHPQSIIHSMVRYIDGSVIAQMGNP
                     DMCTPIAHTMAYPNRINAGVPPLDFFKLKELTFIEPDFARYPNLKLAIEAFAEGQYAT
                     TAMNAANEIAVEAFLNEQIRFTDIVNVNRTVVENIAPIQVSEIADVLHIDKLARELAK
                     QAVLQL"
     gene            complement(6829..8211)
                     /gene="nhaC"
                     /locus_tag="PXD69_000722"
     CDS             complement(6829..8211)
                     /gene="nhaC"
                     /locus_tag="PXD69_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL6282943.1"
                     /translation="MNNYLLKLKPMTAVILSLLTVFILGFTMIGLGWVPQISILAVIV
                     MLLLFGLINKIPFKNMQEGMASGLMSSIGAVYLFFFIGLLVSALMMSGAIPTLMYYGL
                     SVISPELFYISAFALSSVVGIALGSSLTTTATIGVAFIGMASAFGANPAIVAGAVVSG
                     AFFGDKTSPLSDTTTIAASVVGIDMFAHIRNMLYTTIPAWILTALFLWFLTEPTDAQN
                     LANIENLKTNLQETGLIHGYSLLPFVTLILMAIKRVNSIYIIVTTVTLSLIITYIHSS
                     PTLEQLGNYFFTSYKPVEGVDLGEVASLVSRGGINSMFFTITIVLLALSLGGLLQILG
                     ILPALLNGISGFLTSTGRVTLVVASTAVGINVLIGEQYLSLLLSGNTFRSTYERLGLE
                     VKNLSRTIEDAGTVINPLVPWGVCGVFISSVLNVPVLDYLPYAFFCYICLILTLIFGF
                     TGVTISKKAN"
     gene            complement(8257..9843)
                     /locus_tag="PXD69_000723"
     CDS             complement(8257..9843)
                     /locus_tag="PXD69_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDL6282944.1"
                     /translation="MIQITQTINIDLLIVGSGIAGLSAAVEAKEKGINTLLISKSTIG
                     SGASYFPLKATLGIQVTGDEADKIHFKEDIENIGKGKINPNVVQAYIEDSPQAIELLH
                     RIGFQPWKRNDNRPACFAKYPRPIYLIKDWRESALRAKQILQEQHIAFYENATLLHIV
                     TDNNQVQGAVFSLTTSGQISYIFCKTKHLILAAGGIAGLYKDNLYPADVIGSLHYVAQ
                     QAGATLVNLAFIQFIPAFVEPKYKVLFGEHTLKYVTQITDSKGNNLFPHLNAEQFAKM
                     VLERSHYAPFSLDFAGVEFDLVMMKHLLENPHEKGIYLKYSPKLYEDTEEFYTVYLNW
                     LKNEVGIDLVQDKIAIKPFAHSCNGGIQINQWGESAVKGLFAIGEISHCIEGANRMGG
                     NSVGGGLVFAKRAVSEIVRSLEQNDLQKNSEISPLAMAEKALNQLANSTANLELTASE
                     VLSTIREKMALYANVYRTRSNLKLLLEELNRLEQEFDPIYHAQYQGIEIYNALKTAQL
                     VVNQMLNEQSLGAHYLDEQN"
     gene            complement(9906..10712)
                     /locus_tag="PXD69_000724"
     CDS             complement(9906..10712)
                     /locus_tag="PXD69_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6282945.1"
                     /translation="MSMKFIKEQPIIELSNIVVQFASRDGTLFNPKKFTAVNDVSLAI
                     HAGETVGLVGQSGCGKSTLASVMIGLQKPTSGTVKFNGLEMKYGSAEARKYFGSQVSV
                     IFQDPATALNPRMRVLDILKDPMDIHNILQPQEREKRVYDLLSRVGLPRSAALVEPTR
                     LSGGQKQRVAIARALALNPKLIVADEPTSALDVSVRAQVLNLLADLKKELNLAMVFIS
                     HDLQTVHQVSDRIVVMNGGKIVEMGDASDVFERPTQEYTRTLIEAAPSLL"
     gene            complement(10727..12697)
                     /locus_tag="PXD69_000725"
     CDS             complement(10727..12697)
                     /locus_tag="PXD69_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HDL6282946.1"
                     /translation="MFRQGLAARLASGGARFRALSTSSKIALLFIVFIALVAIFAPLV
                     APYDPLQTLRPVQAPSGDYLFGTDRLGRDIFSRMVWGARTSLFIGLGAVGVAILFGSI
                     LGATAATADKFGNEVIMRFMDILMAFPGIALAAVLLATFGNSVPVIIVTIAVVYTPQL
                     ARVVRANVVSQWEEDYVRAERVIGGSRTYILLKHVVRNTAAPVLVFATVMVADAIVFE
                     ASLSFLGAGVQPPFPSWGNILSEGRNLVLSGFWWATTFAGIMILLTVLALNILAEGLT
                     DALVNPKLKRSTQSKEDVAKPLATDVQEAMSETLALKRYLLKLHEKETTRTDRMQLNS
                     TAKPILQVKNLSIRFPNRYGETPLVDNISFTVHEGETMGLVGESGCGKSITAFSIMGL
                     LPKTAKITGEILFTDRSGKQHNLLESADLNALRGHEISMIYQDALSALNPSMRIKDQM
                     AQLISRGGKQSAETLLQWVKLDPEKTLNRYPHELSGGQRQRVLIAMALAREPKLLIAD
                     EPTTALDVTVQAEVIKLLNELREKLGFAMVFVSHDLALVAQIAHHITVMYAGQVVETA
                     PTTPLLANPTHEYTRGLLGSVLSTELRAERLYQIPGSVPSPFDFAKGDRFASRSLRPD
                     ANPEQHLKLVPTGDHPQHFWASHLEDPQSKEA"
     gene            complement(12699..13652)
                     /locus_tag="PXD69_000726"
     CDS             complement(12699..13652)
                     /locus_tag="PXD69_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6282947.1"
                     /translation="MEIILRLLWRRLMALPVMILGVTALVFIVLQFTPGDPATVALGE
                     SASEAAKEIYREQHGLNDPLLVQYFRFLGNLFVLDFGMTTPPEQPIVDMIAKAFPLTL
                     QLTFIGVFLAAIVSFTLGVTAALYRDTWIDQLIRLISVAAVATPSFWLGILLIQYFSL
                     KLDWLPSGGFIPFSEDPKGYVNSMVLPSLALAVPVCASLIRVVRTTMVEEMDKDYVRT
                     AIGNGVPYSTVIRHNVLRNALITPVTVLGLRVGYLLGGAVVIEQIFDLPGMGKLIFNG
                     IVNHDLNLVQGVVLTIAFTFVLVNIIVDILYLLINPKIRSL"
     gene            complement(13864..15447)
                     /locus_tag="PXD69_000727"
     CDS             complement(13864..15447)
                     /locus_tag="PXD69_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6282948.1"
                     /translation="MKKQFEHNESRRGFMKLIAGVGAGMAFSGTLGTFTPKAFAAPAA
                     GSTIEAGIAYPISTGFDPLTSSGASSMAANLHIFEGLVDLHPATRKPYLALAAAEPEK
                     IDDVTYRITLRDGAKFHNGNPVTTEDVVYSFERVLDPAKASLFAQFIPFIDTVKKVDD
                     KVVEFKLKYPFALFKERLTIVKIVPKAVVEAGQAAFDANPVGTGPYKFVSATKDDRIV
                     FEAFADYNGGYPAQVEKMTWFLLSDDAARVTAQESGRVQAIESVPYLDAERLKRKGTV
                     ESVQSFGLLFLMFNCEKAPFNNPKVRQALHYGLDTQKLIDVVFLGNAKAATSYVQDTH
                     PDYVKANSQYDFDKAKAEALLAEAGVTELKFELLATDHSWVKECAPLILESWNSLKGV
                     KVSLKHLQSGALYGTHVDKGAYEVVIAPGDPSVFGNDLDLLLSWWYRGDVWPKRRFRW
                     SETAEYAEVQKLLDEAAKNPAASKEAWAKAINIIAEQVPLYPIIHRKLPTAWNDKALT
                     GFQPLPTTGMSFIGVGRAK"
     gene            15669..16826
                     /gene="hemW"
                     /locus_tag="PXD69_000728"
     CDS             15669..16826
                     /gene="hemW"
                     /locus_tag="PXD69_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HDL6282949.1"
                     /translation="MNLILPPLSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHL
                     LADLSQDLTAYRVAIGDRKLYSIFIGGGTPSLFSAEGIAYLLIEVEKRIAFEPNIEIT
                     LEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNS
                     AKSGLQSFNIDLMHGLPNQSVKQALADLETGISLNPPHLSWYQLTIEPNTMFYYRKPT
                     LPDDDELWDIFEQGHQLLTNAGYEQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAH
                     GKISYPTGEIYRFSKIKHPKGYMRGEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQE
                     FEWFTGLDREVVRPTIDWALNQNYISETATHWQITQHGKLFLNELLEGFLE"
     gene            16969..17451
                     /locus_tag="PXD69_000729"
     CDS             16969..17451
                     /locus_tag="PXD69_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL6282950.1"
                     /translation="MIDKQIRNSTAEFLIFTQQNGAENITVRYEDNEIWLTQKLIAQL
                     FDCSTDNVSLHLKNIFNSRELDPNSVTEDFSVTAADVKNYRTKHYNFDAVISIGYRVN
                     SVRATQFRQWATKVLRNFAQKGYVIDRQRMENGTFLNEDYFEQLLAEIREIWLSERRS
                     "
     gene            17420..17617
                     /locus_tag="PXD69_000730"
     CDS             17420..17617
                     /locus_tag="PXD69_000730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282951.1"
                     /translation="MKFGYLNGVLEGKGKMRFDEAKLHAESEFEKYRIVQDRLFESDF
                     DKVLKEMLRSENQYRPSFSTT"
     gene            17704..18171
                     /gene="bcp"
                     /locus_tag="PXD69_000731"
     CDS             17704..18171
                     /gene="bcp"
                     /locus_tag="PXD69_000731"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDL6282952.1"
                     /translation="MNILQAGDKAPKFTLQNQADEPVSLSQFAGKKVLVYFYPKALTP
                     GCTTQACGLRDSKSELDELNVVVLGISTDLPKKLAQFVEKKALNFTLLSDPDHQVAEA
                     FGVWGEKKFMGKTYDGIHRISFLIDEQGGGEQVFDKFKTGEHHQMIVDYLRGR"
     gene            18171..18719
                     /gene="gmhB"
                     /locus_tag="PXD69_000732"
     CDS             18171..18719
                     /gene="gmhB"
                     /locus_tag="PXD69_000732"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDL6282953.1"
                     /translation="MGKKAIFLDRDGTINIDHGYVHQIDDFQFIDGVGKALKQLQDKG
                     YLLVLVTNQSGIARGYFSEAQFMQLTEWMDWSLDEDYGVVLDGIYYCPHHPEGKGEYR
                     KDCDCRKPKAGMFTQAIQDLNIDPSQSYMVGDKLEDILAAEAAGVKTKVLVRTDKAVT
                     EEGQAKADLVLDSLVDLVKYIK"
     gene            18724..19563
                     /gene="queF"
                     /locus_tag="PXD69_000733"
     CDS             18724..19563
                     /gene="queF"
                     /locus_tag="PXD69_000733"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDL6282954.1"
                     /translation="MNYNDKSLSALKLGQKTEYKSEYDASLLQPVPRKLNRDSLGITQ
                     EQPFNRGADVWTCYELSWLNQNGLPQVAIADVAIDFKSENLIESKSFKLYLNSFNQTK
                     FSSIEEVGKTIQADLARCASGQVSVKIYQLSHYTQQPIVDFAGDCIDEQDIQIDSYAF
                     STHYLENIAEDELVEETLVSHLLKSNCLITSQPDWGSVQIRYKGKKLNREKLLRYLVS
                     FREHNEFHEQCVERIFCDLMQFAEPEKLTVYARYTRRGGLDINPFRSNFEEVPENLRM
                     ARQ"
     gene            19755..20888
                     /locus_tag="PXD69_000734"
     CDS             19755..20888
                     /locus_tag="PXD69_000734"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HDL6282955.1"
                     /translation="MLIFMMNEYSPNYYIGVMSGTSLDGVDIALLDFAKNPPKMTACD
                     FFPMPEELRADISALLKTGETNLQKLGEIDHRLGLLYAETINAFLAKNQLKAEDIQAI
                     GCHGQTVWHSPDSEYPFTTQIGDMNLVAEQTGITTIADFRRKDMAVGGQGAPLVPAFH
                     QAIFSDPNRLTVVLNIGGISNISVLNPNSPTVGYDVGAGNTLMDSWIEQHQGKRYDKN
                     GEWARTGKLNTELLATLLDESFFAKAPPKSTGRELFNLTWLAKKLENLTACQPQDVQR
                     TLAEFTAQSIANELLRFESSLPRLLLVCGGGSRNPLLMERISALLPEWEVTTTTEFGL
                     DIDYVEAAAFAWLAYQRIHNLPSNMPSVTGAKKAVSLGVIYPA"
     gene            complement(20885..21943)
                     /locus_tag="PXD69_000735"
     CDS             complement(20885..21943)
                     /locus_tag="PXD69_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6282956.1"
                     /translation="MAEILFRSCLCCNAKRIFYLLTFYKGFETSQIATAFSLLVFTSQ
                     AFSLFAGSWGDSFGRYPIMMLGCLLDALAYILLLTTKNYPLLLLATFFFGLGSTLFST
                     NARAFLLANIQDTGDSYQLKTKAQGKFLKVSSLSAMVAPLLTIPFIFYRKAEWLIWIS
                     CCIEIIMLFVMFKTAPKTHECANGQCERFKFGALKGILNEQFIFVHLLLFIPLGLGSA
                     FYIIFPYIFTNLLDKPELVSVSFFVNNLIAVLLQSDFSRKLNLTVHKLIYIAPILIIL
                     QIMPWFYALQWLSTITAFLYLVIFATITVYANTALSNMLVKLDNGKNQGLMFGSSKLI
                     LAITTLGVMNVLPYIFLI"
     gene            22026..22487
                     /locus_tag="PXD69_000736"
     CDS             22026..22487
                     /locus_tag="PXD69_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL6282957.1"
                     /translation="MRKIKLLHVILSLILGLSAAAIGSYPAIKEIGEERAKKHQDILD
                     LNRELYSAMVNRDFSALQTLLSDDFELYSSTGEVIDKQEWIKLIQKRVLEFDKVDLLS
                     TDFQGNQSSGLLRVNGEFFGIERDNVVVEMNIRTIVRNTERQIKCIVIKEV"
     gene            22500..23393
                     /gene="murQ"
                     /locus_tag="PXD69_000737"
     CDS             22500..23393
                     /gene="murQ"
                     /locus_tag="PXD69_000737"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDL6282958.1"
                     /translation="MNALGQMITEQRNPNSMNIDRLSALDIVQVINQEDKQVAIAVEQ
                     CLPQIAQAVEKIVQAFEKGGRLVYVGAGTSGRLGVLDASECPPTYGVKPEMVVGLIAG
                     GERALRFPIEGAEDNREQGKVDLQAVNFSEKDVLVGIAASGRTPYVLGAMEYAKQLGA
                     TTVSIASNPNSAMAQIADIAIETVVGPEVLTGSSRMKSGTAQKLVLNMLTTASMILIG
                     KCYQNLMVDVQATNEKLKARAIRIVMQATECEREVAEDTLKLAENNAKLAIMMILGNL
                     DKQKAEDLLSQNQGRLQKALK"
     gene            complement(23477..24421)
                     /gene="prmB"
                     /locus_tag="PXD69_000738"
     CDS             complement(23477..24421)
                     /gene="prmB"
                     /locus_tag="PXD69_000738"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL6282959.1"
                     /translation="MFKYNTELLDEISALPIVNDLVTIQDMMRWGYSYFNASDLYYGH
                     GYDNAWDEAQQLVLAGLYLPFDVPETLYSSRLTRVEKERIINLICERLGSRKPVAYLT
                     NSAWFCGGEYYVDERVIVPRSPIGELIKKGFKGIIKNEPHRILDMCTGSGCIAIACAE
                     RFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFPICSDLFNNLPQDKYDLIVTNPPY
                     VDEEDLGDMPEEFHHEPALALGSGKDGLDLTKRILAQAADYLNDDGVLVCEVGNSMVH
                     LIEQFPSVPFNWLEFEHGGLGVFSLTKEELVKHRHLFA"
     gene            24514..25059
                     /gene="smrB"
                     /locus_tag="PXD69_000739"
     CDS             24514..25059
                     /gene="smrB"
                     /locus_tag="PXD69_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HDL6282960.1"
                     /translation="MNDTLLDDEFALFREAAKGTKKLTQNTFVPKAEPRKKLQELREL
                     KEKADTEFYFSDEYEPLLKEENEKVKYLREDVDPYILKQLRRGDFQPELFLDLHGLTR
                     EKAKKELAALILACEREKVYCASVMTGFGTRTLKDQIPRWLVQHPKVMALHQAPKEWG
                     GDASILILVEQPENPEKMFGR"
     gene            25123..25608
                     /locus_tag="PXD69_000740"
     CDS             25123..25608
                     /locus_tag="PXD69_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HDL6282961.1"
                     /translation="MSEQTFHQLTALLDSHRARYRVVGHPSAGKSEEVAKIRGTEIGQ
                     GAKALVCKVKGNGVKQAVLAILPADYQADLTKIAEHLGGLRASLASPAEVAELTDCVF
                     GAIPPFSFHPDLLLVAEPSLFERYAELAFNAGTLERSIILNTEDYQKIVNPVLVQFAK
                     S"
     gene            complement(25610..26359)
                     /locus_tag="PXD69_000741"
     CDS             complement(25610..26359)
                     /locus_tag="PXD69_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL6282962.1"
                     /translation="MEKRFEINEQGLSIRCKLFYEKELQQIENVVIVLHGFGSSKDLK
                     SNTKFGERLSSKYKGYAALAFDFPCHGDDARKKLSVEESITYLQLVIDYAKTSLNAKN
                     LYAYGTSFGGYLTLKYLAEKGNPFRKIALRAPAVQIYHSLMNRLSEEERQKLAKGREI
                     LWGFDRQMKISQAFFDELTDITQNDYLDYAEQILILHGTEDEMVALSTSQQFADNNVI
                     ELLPIEGADHAFSNPKLMDIAIGKIVEFFAP"
     gene            26531..27394
                     /locus_tag="PXD69_000742"
     CDS             26531..27394
                     /locus_tag="PXD69_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HDL6282963.1"
                     /translation="MLQLILAILCSVTVGVLIKFARQKGIRIDQSIAVNYIVTTTMTF
                     LLLKPDYQGQSITDIIANNPTSYIFVILSITLPTIFLVQAKALEFAGIIRTDAAQRLS
                     LFLPILAAFTIFGEQVTQNKLIALLLAFVALGCLLWKGNQGMEKGGKIAIISLALVWV
                     GYGVNDILFKQIAKSGSAFPVTLSIAFIGAGCFMFIYLLLKRTQWHVPSVLTGLLLGV
                     LNFGNILFYIQAHQAMKDDPTLVFTGMNLGVICLGTFVGAFFFKEKIHKVNYLGVAIA
                     IVAIICLFYWR"
     gene            27518..28111
                     /locus_tag="PXD69_000743"
     CDS             27518..28111
                     /locus_tag="PXD69_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282964.1"
                     /translation="MKLKALSTLIASSMLYSQSFAVPPEKTAEEPQPFFNKTESGYDL
                     VFNDQNYRLIETELNGEKIQFRAFERIVYVNNPIEPDYQTINLYVPEAYYNNGEINGY
                     QADTAPIFLPNSVGGYMPAKAASYDKKRRDGSPGTILVALSKGYVVASVGARGRTLQK
                     EGKYTGKAPSAIIDSKSAAHKACRFESDHWHHSLCKI"
BASE COUNT         8458 a         5556 c         6106 g         8018 t
ORIGIN      
        1 acttttctta ataaacttca tcaaacgttt acgtttgcgt aattggcttg gtgtcagttt
       61 gtttttctta ccggcaaaag gattattgcc ttcttggaat aaaatccgaa ttggcgagcc
      121 gataattttt aaacttttac ggaaataatt acttaaataa cgtttgtaag aatccgctaa
      181 tttttcaacc tgattgccgt gaatcacaat aattggtggg ttgtagccac ccgggtgagc
      241 atattttaat ttcactcggc gaccattaac caatggtggt tggtgttcat cagcagccat
      301 acgcaaaatg cgagtcagca ttgaggtcga ggttttttgc gttgcacaag cgtaggcttc
      361 ttttactgaa tcaaacaaat tccccacgcc tgagccgtgc aatgccgaga taaaatgcac
      421 tctggcaaaa tcaataaaat ctaaacggcg atctaactct gatttcactt gatctttaat
      481 atcttgcgac aagccgtccc atttgtttac cacaatcacc aatgaacgac cagcatttag
      541 aataaagccg agtagtgata aatcctgatc ggaaatacct tctcgggcct caatagttaa
      601 tagcaccacg tttgcatctt gaatggcttg caaggtttta attaccgaga atttctcaac
      661 cgctaaattc actttgccac gtttacgcac accggcggta tcaatgatgg tatattgctg
      721 accgtcacgc tccattggaa tataaataga atcacgggtt gttcctggca tatcataaac
      781 taccacacgc tcttcgccta aaatgcggtt ggtcagtgtt gatttaccaa cattcggacg
      841 accgacaatc gcaattttga tatttttatc ttcaatcgac tcttctgctt cttctgccaa
      901 ggcttcatct aataatgccg catcttcttc gttctcaaag tcgaattcgg tatcccattc
      961 gtctgtttct tcatttgcaa catttttagc attttcgccc gcttgttctt ggttaaattg
     1021 ctcggcattt agctgttcgc ctaaaggagc taacacttgc tcgataagct gcgtaacccc
     1081 acgcccttgt gctgcagcaa tttgttctac ttcgcctaag cctaattgat agaattcggc
     1141 acagtgagag tcggcatcaa taccatcggt tttattggca accaccaccg tggttttttc
     1201 acgttggcgt aaatattgag caatgccgac atcggcaggt aataatccgg ctcgggcatc
     1261 aaccaagaaa agcaccacat cggcttcttc aatcgccaat aaagattgtt ccgccatttt
     1321 ttcttccacg ccttcctctg taccatcaat accaccggtg tcgattacaa tgaaatcgta
     1381 gccggcaata ttagcgtgac catatttacg gtctcgggtt aagccgggga aatctgctac
     1441 taaggcatct cgagtacggg ttaaacggtt aaataaagtc gatttgccga cattaggtct
     1501 gcccactagg gcaacaacag gagtcatttt gtatcctcta tatccggtta tttgcaaaat
     1561 agttgcaaaa attggcttat tatagcggaa atttggggaa gttgaaatta gaagaagatc
     1621 gggaacacgg ggagggacgc acggcgtgcg tccgcaagcg gttaaaaatg ttcaattttt
     1681 tgcaaatatg cctaaaagaa tgtgctgagc atcattcttc tagccgtaat gctcttgaaa
     1741 aactttgtaa gccggtggag ttgccacttt ttgccattgc ttgtaacgct tgggttgggg
     1801 cgtgtagtaa ctggttggtg agtttgtagc ttagctcact taatactttt tggctgtctt
     1861 gcccttgact gattgcttgt agggctttct ccaacaattc ttggcgggtt tgctccgcat
     1921 cttgacgata gcgtttgatt aaatcactag actgctgttg ttttaaccat tcaaaaaatg
     1981 ctttgctttc ctctttgacg atttcagcgg cttgtttggc ggcttcttca cgctgagcca
     2041 tattgcgttg gataatattt tgtaaatcat caacactata agcgtaaacg ccctctaagt
     2101 cgccggcttt ttcgtcaata tcacgaggaa cggcaatatc aatcagcaaa agtgggtcaa
     2161 attggcgttg tttttgcgca atttccacca tttctttact gattagggta tcagggctac
     2221 cggtggagct aataactaca tcagcttggt ttaaaccgag ttgcaaagca cttaacgaca
     2281 gaatttgcat tggagcgttt agtttttccg ccaacatttc cgcccgaata tgggtgcggt
     2341 ttgccaacat tatatttttc gccccgtgtt gaattaaata gcgggcgact aattcaatgg
     2401 tttcgcctgc ccctaccagc aaaaagcgta acttgccaaa attatcgaaa atttgacggg
     2461 ctaaaccgca agctgcataa gcaactgaca ccgcttggct gccgatttcg gtttcggaac
     2521 gtactcgttt tgcggtggca aaggtgcgtt ggaacaagcg tgatagcttg gtggacatcg
     2581 ctttttgctg atgttggtag aaatcttcgc tatattgata ggcttgttta acctgcccta
     2641 aaatttgtgg ttcgcctaaa attagtgaat ctaatccgct tgccactttc attaagtggt
     2701 tagcggcttc taaattttgt ttaaaatata aacattcacg caactcgctt tcatcaagtt
     2761 gatgaatttg ggcaaaccag cggaaacatt gttcacgcca ttggatattt tcctcgctct
     2821 cttcacgggg agaaatatta ggctggtgga agtagagctc ggtgcggttg caggtagaga
     2881 gaatgaccac gctttcagcc aatccgctcg tttggatttg ttcaagagcc agtttacgtt
     2941 tgtcatctac aaacgccact ttctctctta aacccacaga ggcggtttta tggttgattc
     3001 ctaaagctaa aattgtcatt gctacccaca aaaataaaga tcaaaataaa aacgcaagta
     3061 ttttaatcaa gagcgtgaag tcgtgcaaat gattgtgttg ataggtttga tttatcacaa
     3121 ggttgctacc tcttaaggag taaagaggat aagataactt ggattaaatt ttcgattagg
     3181 ggtaaatttt ttctgaattt ccacgtataa taaaactcca ttttaagctg tacaagcggt
     3241 ctaatttcca caaaaattta caaggaggcc ttatggtagc aattcgttat tcccatcaac
     3301 ttgaaccgaa taattttgag ttgtcgagtt ggtgtgcaag cctgaatatg tctcctgtga
     3361 cttttgagca gattcacaat gcgtggagtt atgcacagga aaaactggat accgactata
     3421 gtctgatgtg gtatggcatt gagatggttg aagtattgca cggcttgaat atggacgatg
     3481 acagcttagt tgccgcaatg ctttttcctc tggtaaaaca caatgtgatc gacttggtgc
     3541 aattaaaaga agatttcagt aacgacatca aaaacttagt taaaggcgta ctcgaaatgg
     3601 agaatatccg ccagcttagt gccaataatg tgtcggatct gcaaatcgac aatatccgtc
     3661 gcatgttgtt ggcgatggtg gacgatttcc gctgtgtggt gattaaactt gccgaacgaa
     3721 ttgcctacct gcgtgatagt aaccaccatt ccgaagaaga taccgttctc gccgctaaag
     3781 aatgttctca cgtttatgca ccgcttgcca atcgattggg tatcgggcag ctcaaatggg
     3841 agctggaaga ttactgtttc cgcattttac accctgtctc ttacactcaa attgctaaat
     3901 ttgaattggg cgaacgccgt gtggatcgtg agcgttatat tgcaaatttt gtagcagatc
     3961 tgaccgcttg tttaagtcct gaaatcaaga atgtgcagat ttatggacgc ccgaaacata
     4021 tctacagcat ttggaagaaa atgcagaaaa aacggttgag atttaatcag cttttcgata
     4081 ttcgggctgt gcgggtaata gtgccaacgt tagaagattg ctacacggca ttaggcatta
     4141 ttcacaccaa atatacccat ttgccggaac atttcgatga ttatattgct aacccaaaac
     4201 ctaacggtta tcagtctatt catacagttg tattaggcga aggtgaaaaa acgattgaag
     4261 tgcaaattcg tacccagcaa atgcacgatg atgcggagct aggcgtagcc gctcactgga
     4321 aatataaaga gggggcaacc gcagggcgtt cgggctacga agaaaaaatc gtgtggctac
     4381 gcaaattgct tgagtggcaa aacgatcttg ccgattcagg cgatatggtg gcagaaatgc
     4441 gttcgcaaat ttttgatgat cgtgtttatg tctttacccc aagaggcgag gtgatcgatt
     4501 taccgcaaaa agctacacca cttgattttg cttatgcaat tcatagtgaa atcgggcatc
     4561 gttgcattgg agcaaaagtg gcagggcgga ttgtgccgtt tacttatcat ctgcaaatgg
     4621 gcgatcaggt tgaaattatc acccaaaaag agccgaaccc aagccgagat tggctcaatc
     4681 cgaataccgg ttttgtgaat acaggcaaag ctcgctcaaa aattattgcg tggtttaaaa
     4741 aattagaccg agagaaaaat attccaatcg gcaaagaggc ccttgaagcc gaaatggaaa
     4801 aattcggttt tacgctcaag caaattgaag aatatgctct gcctcgctat aacttaaaac
     4861 agtttgatga tctctatgcc ggtattggcg gtggcgatat tcgtcttcat cagttaatgc
     4921 acttcttgca atcaaaatta attaaaccga ccgccgaaca agaagacgaa gcggtactta
     4981 aacaggtgaa taaaaacacc aatcagccga agccaagcaa aggctatgtg attgtagagg
     5041 gcgtagggaa cttaatgcat tccattgccc gttgctgcca gccgattccg ggtgatgaaa
     5101 tcgtgggtta catcacacaa ggcagaggga tttcgattca ccgtgcagat tgtgagcaac
     5161 tgtttgaatt acaaagtctc aacccagaac gagttgtgga ggcggattgg ggcgaaggct
     5221 atacctctgg tttaagctta accattcgag tgattgccaa tgaccgcaac ggcttactgc
     5281 gagatgtcag tgcaattatg gcaaatgaaa aagtaaacgt gttaggcgtt tccagccgaa
     5341 ccgatgtgaa acgtagcctt gccaccattg atatggaaat tcagcttaac aacgttgaaa
     5401 ttttgaataa attattggct cgtatcgctc aattagatga tgttatcgaa gcaaaacggc
     5461 tttcgagtta atctacaagc ggttgttttt gctaaacaat ttacaaacaa cgaatgagta
     5521 tccgcataat tacggcgtag gggcgaaaaa tctttcgccc ttatcagtca ttagataaag
     5581 agaaacaaaa tgaaaaaatt agtgatttta ggttcaacag gttctatcgg taaaagcact
     5641 ttatcggtag ttgagcataa cccaaaccca aaccaatatg aggtgtttgc gttagttggt
     5701 ggaaagaatg ttgaattaat gctggagcaa tgtcgtcaat atcagccgac ttttgcggca
     5761 atggatgatg aaaaatccgc acaagcatta aaaacggcat tggcaacttt ggggtctaaa
     5821 actgaagtgt tagccggtca agcagctatt tgtgagcttg ctgcacattc cgaagtggat
     5881 atggtaatgg ctgctattgt aggagcagca gggttattac cgacactttc tgcggtgaaa
     5941 gcgggtaaaa ccgtattgtt ggcaaataaa gaatcgctgg taacctgtgg gcaaattttt
     6001 attgatgagg ctcgtaaatc cggtgcgaag ctcttaccgg tagatagtga acacaatgcg
     6061 attttccaat cgcttccacc ggaggcacag caaaaagtcg ggttttgtcc actcgctgaa
     6121 ctgggtgtca gtaaaattat tttaacagga tcgggtggac cgttccgtac taagccatta
     6181 aatgaatttg atgcgattac accggctcaa gcagttgctc accccaattg gtctatgggt
     6241 aagaaaattt cagtcgattc agccacaatg atgaacaaag gcttggagta tattgaagcc
     6301 cgctggttgt ttaatgcaac agccgaggaa atggatatca tcattcaccc acaatcaatt
     6361 attcattcga tggtgcgtta tattgatggc tcggtgattg ctcaaatggg caacccggat
     6421 atgtgtacgc cgattgctca cacgatggca tatccaaacc gaattaatgc tggtgtgcca
     6481 ccattagatt tctttaaatt aaaagagcta acctttatcg agccggattt tgcccgttac
     6541 ccgaacttaa aattagcgat tgaggctttt gcagaaggac agtatgcgac aacagcgatg
     6601 aatgccgcca atgaaattgc cgttgaggcg tttttaaacg agcaaatccg ctttacggat
     6661 attgtgaacg tgaatagaac ggtggtggaa aatattgctc caattcaagt cagtgaaatt
     6721 gctgatgtat tgcatattga taaactcgcc agagagttag ccaaacaagc tgttcttcag
     6781 ctctaatgaa aagaaaatgc ctacaaattt gtaggcattt ttcacatatt agttagcttt
     6841 tttactgatt gttaccccgg taaatccaaa aattaaggta aggattaaac agatataaca
     6901 gaagaatgcg tatggtagat aatctaacac cggtacattt aatacgctac tgataaacac
     6961 accgcacacg ccccaaggga ctaatgggtt gattaccgtg cctgcatctt caatggtgcg
     7021 agataagttt ttcacttcta agcctaaacg ttcataagtt gagcggaaag tattacctga
     7081 taacaataag ctcaaatatt gctcaccgat taagacgtta attcccaccg cagtgctggc
     7141 aactacaaga gtaacacgtc ctgtgctggt taaaaagccg ctaatgccgt taagtagtgc
     7201 cggtaaaatg ccgaggattt gtaaaagacc acctaaactt aacgcaagca atacaatagt
     7261 gatggtaaag aacatactat taatgccacc acgagagact aatgatgcca cttcgcctaa
     7321 atctacgcct tcaacaggtt tatagctggt aaagaaataa ttccctagct gttcaagggt
     7381 tggcgaactg tggatatagg taataattag cgagagtgtt actgtagtta caataatata
     7441 aattgaatta acacgcttaa ttgccattaa aattaacgta acaaaaggta gcaaagagta
     7501 gccgtgtatt aatcctgttt cttgcaaatt ggtttttagg ttctctatat ttgctaaatt
     7561 ttgtgcatca gtaggttcgg ttaaaaacca aaggaataat gctgttaaaa tccacgcagg
     7621 gatggtggta taaagcatat tacggatatg agcgaacata tcaatgccca ctacggaagc
     7681 agcaatggta gtagtgtctg aaagtggaga ggttttatcg ccaaaaaacg cccctgaaac
     7741 caccgcacct gctacaatcg cagggttcgc accgaaagca gaagccatac cgataaaagc
     7801 aacaccgatg gtggcggttg tggttaaact actgcctaac gcaataccta ctacagaact
     7861 taatgcgaat gcagaaatgt aaaataattc aggtgaaatc acacttaagc cataatacat
     7921 taaggttgga atcgcaccag acatcatcaa agctgaaacc aataatccaa taaaaaagaa
     7981 taggtaaacc gcaccaatac tggacatcag cccgcttgcc ataccctctt gcatattttt
     8041 aaacggaatt ttattgatta agccgaaaag tagcagcatt acaatcacgg ctagaattga
     8101 aatttgaggc acccagccaa gcccaatcat tgtaaaacct aagataaaga ccgtcaaaag
     8161 cgaaagtatg accgctgtca ttggttttaa tttaagtagg tagttattca tttatactcc
     8221 taatttatta tttttaaata agttggctat tatagactaa ttttgttcat ctaagtagtg
     8281 cgcgcctaaa ctctgctcat ttagcatttg attgaccact aattgagcgg tttttaacgc
     8341 attgtaaatt tcaatgcctt gatattgagc gtgatagatt gggtcaaatt cttgttccaa
     8401 acggtttaat tcctcaagta gtagtttgag gttgctccga gtgcggtaca cattggcgta
     8461 taacgccatt ttctctcgaa tagtagaaag cacttcactg gcagttagtt ctagattagc
     8521 agttgaatta gcaagctgat ttaatgcttt ttctgccatt gcaagcggtg agatttcgct
     8581 gtttttttgc aaatcattct gttctagcga acgaacaatt tccgataccg cacgtttggc
     8641 aaacactaag ccaccgccga ctgagttacc acccatacgg tttgcccctt caatgcagtg
     8701 agaaatctca ccaatcgcaa atagcccttt tactgcactt tcgccccatt gattaatttg
     8761 aatgccgccg ttacagctat gagcaaacgg cttgattgca atcttatctt gcactaaatc
     8821 aatcccgact tcatttttga gccaattcaa atagacggta taaaactctt ccgtgtcttc
     8881 atacagtttg gggctgtatt taaggtaaat gcctttttcg tgagggtttt caagcaaatg
     8941 tttcatcatc actaaatcga actccacgcc ggcaaaatca aggctgaaag gagcataatg
     9001 gctacgttcc agcaccattt ttgcaaattg ctcggcattt aagtgtggaa atagattgtt
     9061 acccttagaa tcggtgattt gggtgacata tttcaatgta tgttcgccaa atagcacctt
     9121 gtattttggc tcgacaaagg caggaatgaa ctgaataaag gcaagattaa ccaaggttgc
     9181 cccggcttgt tgtgccacat aatgaagtga accgataaca tcagccgggt agagattatc
     9241 tttatacagc ccagcaatcc cgcctgcggc taaaataaga tgcttggttt tgcaaaaaat
     9301 ataggaaatt tgaccgcttg tagtgagcga aaataccgca ccttgcactt ggttattgtc
     9361 tgtgacgatg tgtaaaaggg tagcattttc atagaaagca atgtgttgct cttgcaaaat
     9421 ctgtttcgct cgtagggcag attcccgcca atctttaatt aaataaattg ggcgagggta
     9481 tttggcaaaa caagccggac ggttgtcgtt acgcttccaa ggctgaaagc cgatacggtg
     9541 gagtagttca atcgcttgtg gtgaatcttc gatataggct tgtaccacat tagggttgat
     9601 tttgcctttg ccgatgtttt caatatcttc tttaaagtga attttatcgg cttcatcgcc
     9661 ggttacttga atgccaagtg ttgccttaag cggaaagtag ctcgctcccg agccaatcgt
     9721 agatttgcta atcagtaagg tattaatgcc tttttctttt gcctcaactg cagcagaaag
     9781 cccagcgatg ccagagccga caattaataa atcaatgtta atggtttggg taatttggat
     9841 cataaataaa aacacaagcg gtaaaatttg cgaaaaattt taccgcttgt aggcacaaag
     9901 cacaattata ataaagatgg tgctgcttca attaaggttc gggtgtactc ttgcgttggg
     9961 cgttcaaata cgtctgaagc atcgcccatt tccacaattt taccgccgtt cataaccaca
    10021 atgcggtctg aaacttggtg aacggtttgt aagtcgtgag agataaatac catcgctaaa
    10081 ttgagttctt ttttcaagtc tgccagcagg ttcagtactt gagctcgaac cgatacgtca
    10141 agtgcagagg ttggttcatc agccacaatc agcttcggat ttaatgccaa tgcacgagca
    10201 atcgctacac gttgcttttg cccaccagat aatcgggttg gctcgaccaa cgccgctgaa
    10261 cgaggtagac cgactcgaga gagcaaatca taaacccgct tctcacgttc ttgcggttgt
    10321 aagatattat gaatatccat cggatctttt aaaatatcca acacacgcat acgcggattt
    10381 agggcggttg ccgggtcttg gaaaattact gacacttggc taccgaaata tttgcgagct
    10441 tccgcactgc catatttcat ctctaagccg ttaaatttta ctgtgccgga ggttggtttt
    10501 tgaagcccga tcatcacact ggctaaagta gatttgccac aaccagattg tccaaccaga
    10561 ccgactgttt caccggcgtg aattgctagg ctgacatcat ttaccgccgt gaattttttc
    10621 gggttaaata aggtgccgtc acgagaagca aattgcacaa caatattaga cagttcaata
    10681 attggctgtt ctttgataaa tttcatactc atcgtattgc tctcctttat gcttctttag
    10741 attgtggatc ttctaagtgt gaagcccaga agtgttgtgg gtgatcaccg gttggcacta
    10801 atttcaagtg ctgttcaggg tttgcatctg gtcttaatga acgactcgca aaacggtcac
    10861 ctttcgcaaa atcaaatggt gaaggcacac tgcccggaat ttggtatagg cgttctgcac
    10921 gcaattcggt agaaagtacc gagcctaata atccacgtgt gtattcgtgt gttgggtttg
    10981 ccaataatgg cgtagttggt gcagtttcaa ccacttgacc agcatacatt accgtgatgt
    11041 ggtgagcgat ttgtgccact aaagctaagt cgtggctcac gaataccatt gcaaatccaa
    11101 gtttctcacg taattcgttt aataatttga tcacttcagc ttgaacggtt acgtctaatg
    11161 ctgttgttgg ttcatcagca atcaatagtt tcggttcacg agcaagtgcc attgcaatta
    11221 atacacgctg acgttgtcct ccagataact cgtgaggata acggttgagc gttttttccg
    11281 ggtcaagttt tacccattgc aataatgttt ctgctgattg tttaccacca cggctgatta
    11341 attgtgccat ttggtcttta atacgcattg atgggtttaa cgcacttaat gcatcttggt
    11401 aaatcatcga gatttcgtga ccacgaaggg catttaaatc ggctgattct aaaagattgt
    11461 gttgtttacc tgaacggtcg gtaaagagga tttcaccagt gatttttgca gtttttggta
    11521 ataaacccat aattgagaat gcggtgattg atttaccaca accagattca cccactaagc
    11581 ccatggtttc gccttcgtga acagtaaagc tgatattatc aacaagcgga gtttcaccat
    11641 aacgatttgg gaaacggatt gataagtttt tcacttgtaa aatcggtttg gccgttgagt
    11701 ttaattgcat acggtcagta cgggtcgttt ctttctcgtg taatttgagt aagtaacgtt
    11761 ttaacgcaag agtttcagac attgcttctt gaacgtctgt tgccaatggt tttgcgacat
    11821 cttctttact ttgagttgaa cgttttagtt ttggatttac taacgcatcg gttaagcctt
    11881 cagcaaggat atttaacgca agtacggtta ataaaatcat aatccctgcg aaagttgtag
    11941 cccaccagaa gccacttaat acaaggttac gaccttcaga taagatattt ccccaagatg
    12001 ggaatggagg ctggacacct gcacctaaga atgaaagtga tgcttcaaat acgatggcat
    12061 cagcaaccat cactgttgcg aatactaaaa ccggtgcagc agtattacgc acaacgtgtt
    12121 ttaatagaat ataagtacgg ctaccaccaa ttacacgctc ggcacgcaca taatcttctt
    12181 cccattgaga tactacgtta gcacgcacca ctcgggcaag ttggggagtg taaacaaccg
    12241 caatagtcac gataatcaca ggtacagagt taccgaaagt ggcaagtaat acagcagcta
    12301 atgcgatacc cgggaatgcc attaagatat ccataaaacg cataatcact tcgttaccga
    12361 atttatcggc ggttgccgca gttgccccta aaatactacc gaatagaatc gcaacgccta
    12421 ccgcacctaa accgataaag agagatgttc ttgctcccca taccatacgc gagaaaatat
    12481 cacgtcctaa acggtctgta ccgaataaat aatcaccgct tggagcttgc actggacgta
    12541 gcgtttgcag tgggtcataa ggcgctacta atggtgcaaa aatagcgact aatgcgataa
    12601 atacaataaa gagtaaggcg atttttgagc tggttgataa tgctctaaat cttgcaccgc
    12661 ctgaagcaag tcgagcagct aatccttggc gaaacatatt ataaactccg aatttttgga
    12721 ttaatgagca agtaaagaat atcaacaatg atattcacca acacgaaagt aaatgcgata
    12781 gttaatacta caccttgcac taagttcaag tcgtgattga cgataccgtt gaaaattaat
    12841 ttacccattc ccggtaagtc gaagatctgt tcaatcacaa ctgcaccacc taataaataa
    12901 ccaacccgta aacctaatac tgttaccgga gtaattaagg cattacgaag cacgttgtgg
    12961 cgaatcaccg ttgagtaagg tacaccatta ccgatggctg ttcgaacata atctttatcc
    13021 atttcttcta ccattgttgt acgcacgaca cggatcaatg aggcacatac aggaacagct
    13081 aaagcgagtg aagggagaac cattgagttt acatagcctt ttggatcttc gctaaatgga
    13141 ataaaaccgc ctgaaggcaa ccaatctaat tttaaggaga agtattgaat caataaaata
    13201 cccaaccaga aagaaggtgt ggcaacagcg gcaaccgaga ttaaacggat taattgatca
    13261 atccaagtat cacggtaaag tgctgccgtt acacctaatg tgaaagagac gatagcagct
    13321 aagaagaccc caataaaggt aagctgtaat gttaaaggga atgctttagc aatcatatca
    13381 acaataggct gttctggagg ggttgtcata ccgaaatcta atacgaataa attccctaaa
    13441 aagcgaaaat attgtacaag caatggatca tttaacccat gttgttcacg atagatttct
    13501 ttagcggctt cgctggcgct ttcaccgaga gcaacggttg ccggatctcc gggggtgaat
    13561 tgtaaaacaa taaataccaa ggcagttacg cctaagatca ttaccggcag agccattagg
    13621 cgacgccata ataatcggag tataatttcc attttcttct ccttgagtgt agttacactc
    13681 caaaattaaa tctaagttta cctacaagct aatatagtga tatgtaggat tataaatgaa
    13741 aatatagaaa tggtaagaat tctgagtgat ataagacgaa tattacatca ttttgatttt
    13801 tatttatgca agcggtaaat tttttgtaaa atattaccgc ttgcatttag ctagccgtta
    13861 cgactattta gcacgaccaa caccgataaa tgacatacct gttgttggta atggttggaa
    13921 acctgttaat gccttatcat tccacgcagt tggcaattta cggtgaataa ttgggtaaag
    13981 aggcacttgt tcagcgataa tattgattgc tttcgcccag gcttctttag aagcagcagg
    14041 atttttggcc gcttcatcaa gcagtttttg tacttctgca tattcagctg tttcagacca
    14101 gcggaaacga cgtttcggcc atacatcacc acgataccac cagcttaata ataggtctaa
    14161 gtcattaccg aaaactgatg ggtcgccagg tgcaatcaca acttcgtatg cacctttatc
    14221 aacgtgtgtg ccatataatg cacctgattg taagtgtttg agtgaaactt tcacgccttt
    14281 taagctgttc cacgattcaa gaattaatgg cgcacattct ttcacccaag agtgatcggt
    14341 tgccaacaat tcaaatttta actctgtcac acccgcttct gctaataacg cttcggcttt
    14401 cgctttatcg aaatcatatt gcgaatttgc tttcacataa tccgggtgag tatcttgcac
    14461 gtaagatgta gcagcttttg cattgcctaa gaacaccaca tcaattaatt tttgggtatc
    14521 taagccataa tgtaacgctt ggcgaacttt cgggttgtta aacggtgctt tttcacagtt
    14581 aaacattaag aacagtaagc cgaatgattg tactgactca acggtacctt tacgttttaa
    14641 gcgttctgca tctaagtaag gcacagactc aattgcttga acacggccag attcttgagc
    14701 ggttacacga gcggcatcat cagaaagtaa gaaccaagtc attttctcga cttgtgccgg
    14761 gtagccaccg ttataatctg caaatgcttc gaaaacaata cgatcatctt tagttgcgga
    14821 tacaaattta tatgggccag tccccactgg attagcatca aatgcagctt gaccggcttc
    14881 taccactgct tttggtacga ttttaacaat ggttaggcgc tctttgaata acgcaaatgg
    14941 atatttcaat ttgaattcaa ccactttgtc atcaactttt ttcacagtgt caataaatgg
    15001 aatgaattgt gcgaaaagtg atgctttagc tgggtctaat acacgttcaa atgagtaaac
    15061 tacgtcttca gtggtaaccg gattaccatt gtggaattta gccccgtcac gtaaagtaat
    15121 tcgataggtt acatcatcaa ttttttcagg ctctgctgct gccaatgcta aatatggttt
    15181 gcgagtggct ggatgtaagt ccacgaggcc ttcaaaaata tggaggtttg ccgccattga
    15241 ggatgcaccg cttgaggtaa gcgggtcaaa tccggttgat atgggataag ctataccggc
    15301 ctcaatcgtt gagccggcgg caggggctgc aaatgcttta ggtgtaaatg tacctaaagt
    15361 gccactaaat gccataccgg caccgacacc tgcaattagt ttcataaaac cacggcggga
    15421 ttcgttgtgt tcaaactgtt ttttcatctt aaagctcctt taagttttta tgataggggc
    15481 ggtattattt gctgaagtga atttatcaaa aaatgcactt ttttgaattg aatttatcat
    15541 atcattaatg tcaaagtggt aaagcaagaa ttattgaatt tgtgatctag ctcacgaaaa
    15601 tctttgcttt tcacttcacg tgcttttcgt tattattcgc caatttaatc ataaatgaaa
    15661 aattgacagt gaacctgatt ttaccgcctt taagccttta tatccatatc ccttggtgcg
    15721 tgcaaaaatg cccttattgc gattttaact cgcacgctca aaaaggatta attcccgagc
    15781 aagaatatat cgaacattta cttgcagatt tatcccaaga tttgaccgct taccgagtgg
    15841 caataggtga tcgtaaatta tattctattt ttattggcgg cggcaccccg agcttatttt
    15901 cagcggaagg gatagcttat ttattaattg aagtagaaaa acggattgca ttcgagccaa
    15961 atatcgaaat tacactggaa gcgaacccgg gaaccgcaga ggcagagcga tttttaggtt
    16021 acgcacaagg tggcgtaacc cgcatttcaa tgggaatcca aagttttgag ccggaaaaat
    16081 tattgaaatt aggacggatt cacgatgcaa atgaagcaaa acaagcgatt aaatttgccc
    16141 aaaattctgc aaaatcgggc ttgcaaagtt tcaacattga tttaatgcac ggcttaccaa
    16201 accaatcggt taaacaagcc ttggcggatt tagaaacagg gatttcactc aatccaccgc
    16261 atttatcgtg gtatcagctc acgattgagc cgaatacgat gttctattat cgtaagccaa
    16321 ccttgcctga tgatgacgag ttatgggata ttttcgagca agggcatcaa cttttaacga
    16381 atgccggcta tgagcagtat gaaacctcgg cttatgccaa aaaaggctac caatgcagac
    16441 acaatttaaa ttattggcga tttggggatt atttggcgat tggttgtggc gctcacggca
    16501 aaatttcata tccgaccggg gaaatttatc gctttagcaa aatcaaacac ccgaaaggtt
    16561 atatgcgagg tgaatatcgc tacagccaag atttgattga attagacgac cgcccgtttg
    16621 agttttttat gaaccgcttt agattacttg aagcgacacc aaaacaagaa tttgaatggt
    16681 ttacagggtt agacagggaa gttgttcgcc cgacaatcga ttgggcgtta aaccaaaact
    16741 atatttccga aaccgcaacc cattggcaaa ttacccaaca cggtaaattg tttttaaatg
    16801 aattactgga aggatttttg gaataatttg caaaaaaacg actaaaaaaa gaccgcattg
    16861 taatgctaaa ttacaggcgt tttttgtgat ctgcgtcgaa aaatcctcat tttttactag
    16921 acaaaaaaac agtgtttagt agcatagcct tcacaataag gagagcttat gatcgataaa
    16981 caaatccgta atagtaccgc cgaatttttg atttttactc aacaaaatgg ggcagaaaat
    17041 attaccgttc gctatgaaga taacgaaatt tggcttacgc aaaaattaat tgctcagctt
    17101 tttgattgct caacagataa tgtttctttg catttaaaaa acatttttaa tagtagggaa
    17161 ctcgatccaa attcagttac cgaggatttc tcggtaactg ccgcagatgt caaaaattat
    17221 cgtaccaaac actacaactt tgatgccgtt atttcgatag gctatagggt aaactcggtg
    17281 cgggcgacac aatttcgcca atgggcaact aaagtattac ggaatttcgc ccaaaaaggc
    17341 tatgtgattg accgccaaag aatggaaaat ggtacatttt taaatgaaga ttattttgag
    17401 cagttgctgg cagaaattcg tgaaatttgg ttatctgaac ggcgttcttg agggcaaagg
    17461 caaaatgcgt tttgatgaag cgaaattgca cgcagaaagc gaatttgaga aataccgcat
    17521 tgttcaagac agattatttg aaagcgattt tgacaaggta ttgaaagaaa tgttgcgttc
    17581 ggaaaatcaa taccgtccat cattttcaac aacataaaac aaccgcattt tgcaaatttt
    17641 ttgccaagtt tgaccgcttg ccgtgtataa tgcaagcggt tattttttat ggaaaaatta
    17701 caaatgaata tcttacaagc aggcgataaa gcccctaaat ttacccttca gaatcaggct
    17761 gacgagccgg tttctctctc tcaatttgcc ggcaaaaaag tactggttta tttttatccg
    17821 aaagctctta cacccggttg cactacgcaa gcgtgcggac tgcgtgacag caaatcagaa
    17881 cttgatgagc tcaatgtggt tgttctcgga attagcaccg atttaccgaa aaaattagct
    17941 caatttgtag agaaaaaagc acttaatttt accttattat ctgacccgga tcaccaagtt
    18001 gcagaagcct ttggtgtatg gggcgaaaag aaatttatgg gaaaaaccta tgacggcatt
    18061 catcgcatca gttttttaat tgatgagcag ggggggggtg agcaagtgtt tgataaattt
    18121 aaaaccggcg aacatcacca aatgatcgtg gattatctac ggggtcgcta atgggaaaaa
    18181 aagccatttt tttagaccgt gacggcacaa ttaatatcga tcacggctat gtgcatcaaa
    18241 ttgatgattt tcaatttatt gacggtgtcg gcaaggcgtt aaaacagcta caagacaaag
    18301 gttatttatt ggtgctggta accaatcaat ctggcattgc ccgaggctat tttagcgaag
    18361 cacaatttat gcaactaacc gaatggatgg actggtcgct cgatgaagat tatggcgtgg
    18421 tactagacgg tatttactac tgcccacatc accccgaagg caaaggcgaa taccgtaaag
    18481 attgtgattg ccgtaagcct aaagcaggta tgtttactca agcgattcaa gatttaaaca
    18541 tcgacccaag ccaatcttat atggtgggcg ataaattaga agatatcctt gccgcagaag
    18601 ccgccggcgt gaaaaccaaa gtgctggttc gcactgacaa agcagtgacg gaagagggtc
    18661 aggctaaagc cgatttggtg ttagatagtt tagttgattt agtaaaatat attaaataaa
    18721 gcaatgaatt ataacgataa atccctttcc gccctgaaat tagggcaaaa aaccgagtac
    18781 aaaagcgaat atgatgcctc gcttttgcaa cctgttcctc gtaaattaaa ccgtgatagt
    18841 ttaggcatta cacaagagca gccttttaac cgaggggctg atgtgtggac ttgctatgag
    18901 ctatcttggt tgaaccaaaa tgggctaccg caagtagcga ttgcagatgt cgccattgat
    18961 tttaagagcg aaaacttaat tgaatcgaaa agtttcaagc tctatttgaa cagttttaac
    19021 caaaccaaat ttagctcaat agaagaagtt gggaaaacga ttcaagcgga tctggctcgc
    19081 tgtgcaagcg gtcaggtttc ggtaaaaatt taccaattat cacactacac gcaacagccg
    19141 atagttgatt ttgcaggcga ttgcattgat gagcaagata ttcaaatcga cagttatgcg
    19201 ttttcgactc attatttaga gaacattgca gaagatgagt tggtggaaga aaccttagtc
    19261 agccatttgc tcaaatctaa ctgcttaatt acgtcacagc ctgactgggg aagtgtgcaa
    19321 attcgctaca aaggcaaaaa gctaaaccgt gaaaaactgt tacgttattt agtgtcgttc
    19381 cgtgagcata atgagttcca cgaacaatgt gtggaacgca ttttctgtga tttaatgcaa
    19441 tttgccgagc cggaaaaatt aacagtttac gcacgctaca ccagacgagg cgggctagac
    19501 atcaatccgt ttagatcgaa ttttgaggaa gtgccggaaa atctaagaat ggcacgccaa
    19561 tgattttgtt gttttttgtt cccgtctgaa ccgcctgagc gtgtttgaat tggtaggtaa
    19621 atttactctg agcggagcga atgtaaattt gccgttaagc caattcaaac taagcgagga
    19681 tagcggtgaa gctcgggttg cctttctttt ggttactttt ctttggcaaa gcaaagaaaa
    19741 gtaacaaata gcagatgttg atttttatga tgaatgaata tagcccaaat tactatatag
    19801 gcgtaatgtc cggcacgagc cttgatgggg tggatattgc tttgctggat tttgcaaaaa
    19861 atccaccgaa aatgaccgct tgtgattttt ttccaatgcc ggaggaatta cgggcggata
    19921 tttctgcgtt acttaaaacc ggcgaaacca atctccaaaa actgggggaa attgatcacc
    19981 gtttaggctt gctttatgca gaaacgatca atgcgttttt agcgaaaaat cagctaaaag
    20041 cagaagatat tcaagccata ggttgtcacg ggcagacggt gtggcattca ccggattctg
    20101 agtatccctt caccacccaa attggcgata tgaatttggt ggcagagcaa accggtatta
    20161 ccactatcgc tgattttcgg cgtaaagata tggcagtagg tgggcaaggg gctccgcttg
    20221 tgccggcatt tcatcaagct atttttagcg atccaaatcg tctaacagtg gtgctgaata
    20281 ttggcggcat cagcaatatt tcggtgttaa atcccaattc ccctacagtt ggttatgatg
    20341 taggagccgg aaatactttg atggatagtt ggatcgaaca acatcaaggc aaaagatacg
    20401 ataaaaacgg cgaatgggcg agaacgggca agctcaatac tgaactgtta gcgacgttat
    20461 tagacgagtc gttttttgct aaagccccgc ctaaaagcac tgggcgggag ctgtttaatt
    20521 taacgtggct tgcaaaaaaa ttggaaaatt tgaccgcttg tcagccacaa gatgtgcaac
    20581 gcacgctggc agaatttact gctcaaagta ttgccaatga gttattacgc tttgaaagct
    20641 ctctgcctcg cttgctttta gtttgtggtg gtgggtcaag aaatccgtta ttaatggaac
    20701 ggatttctgc tttacttccc gagtgggagg ttacaaccac tacagaattt ggtttagata
    20761 ttgattatgt agaggctgcc gcttttgctt ggttagctta ccagcgaatc cataatttac
    20821 ccagtaatat gcctagcgtg acaggagcaa aaaaagccgt gagtttgggc gtgatttacc
    20881 ctgcttagat taagaaaatg taaggtaata cattcattac tccgagagtg gtaatagcta
    20941 aaattaattt agagcttcca aacattaagc cttggttttt accattgtct aatttcacta
    21001 gcatattaga tagtgccgta ttcgcataca cggtaatagt ggcaaaaatc actaaataga
    21061 gaaatgcagt gatggttgaa agccattgga gtgcataaaa ccaaggcatt atttgaagta
    21121 taatcagtat tggtgcaata taaataagtt tatgtactgt cagatttaat tttcgtgaaa
    21181 aatcagattg caataacact gcaattaaat tattcacaaa gaatgagaca gagactaatt
    21241 ctggtttatc cagaagattg gtgaatatat aggggaatat aatataaaat gcacttccta
    21301 gaccaagcgg aataaaaagt aataaatgta caaaaataaa ttgttcattt agtattcctt
    21361 ttaatgcacc aaatttaaag cgttcgcatt gcccatttgc acattcatgt gttttgggtg
    21421 cggttttaaa cataacgaat agcataataa tttcaatgca gcagctaatc caaataagcc
    21481 attctgcttt acggtagaaa ataaatggaa tagtaagtaa tggtgctacc atcgctgaca
    21541 ggcttgatac cttcagaaat ttaccttgag ccttagtttt gagttggtaa ctatctccgg
    21601 tatcttgaat attggctaat aagaatgctc tcgcattggt actaaataag gtgctaccga
    21661 gcccgaagaa aaaggtagca agtaatagca gagggtaatt ttttgttgtc agtaataaaa
    21721 tgtaagctag ggcatcgagc aaacagccaa gcatcatgat agggtaacgt ccaaaactat
    21781 caccccaaga acctgcaaaa agggaaaatg cttggctggt aaagaccaac aaagaaaatg
    21841 cagttgcaat ttggctggtt tcaaagcctt tgtagaatgt aagtagataa aaaatacgct
    21901 ttgcattgca gcataagcaa gaccggaaaa gaatttccgc cataaaatga tattttggat
    21961 attcatagat aatatttaat gagaaaaatg atttctaata taactaaatt taataaggaa
    22021 gcacaatgag aaaaatcaaa ttattgcatg ttattttatc tttaatatta gggctttctg
    22081 cggcagcgat tggaagttat ccggcaataa aagagattgg cgaggagcgg gcaaaaaaac
    22141 atcaagatat attagattta aatagagaac tttatagtgc aatggtgaac cgtgattttt
    22201 cggctttgca aacattacta agcgatgatt ttgagcttta ttcatcaaca ggtgaagtga
    22261 ttgataagca agaatggatc aaattaatcc aaaagagagt attggaattt gataaggttg
    22321 atttgctatc taccgatttt caggggaatc aatcatctgg attattaaga gtaaatggtg
    22381 agttttttgg gatagagcgg gataatgtgg tggtagaaat gaatattcga accattgtga
    22441 gaaatacaga acgccaaatt aaatgtattg tgattaaaga ggtttaagtg tcgcaactat
    22501 tgaatgcctt agggcagatg attaccgaac aacgtaatcc gaattcgatg aatattgacc
    22561 gcctttcagc gttagatata gtccaagtca tcaaccaaga agacaaacaa gtagcgattg
    22621 cggtggagca gtgcctgcct caaattgcac aagcggtgga aaaaattgtg caagcctttg
    22681 agaaaggtgg acgattggtt tatgtcggtg ccggcacgag cggaagatta ggggtgcttg
    22741 atgcttcgga atgtccgccc acttatggcg taaaacctga aatggtggtt ggattaattg
    22801 ccggtggtga gcgggcatta cgtttcccga ttgaaggggc ggaagataat cgtgagcaag
    22861 gcaaagtaga tttacaagcg gtcaatttta gcgaaaaaga tgtattggtc gggattgcag
    22921 ccagtgggcg aacgccttat gtgttagggg cgatggaata tgctaagcaa cttggtgcga
    22981 ccacggtgtc gattgccagt aacccaaatt cggcaatggc acaaattgcg gatattgcga
    23041 ttgaaaccgt tgtcgggccg gaagtgctaa ccggttccag ccgtatgaaa tccggcacag
    23101 ctcaaaaatt ggtattgaat atgctcacta ctgcgtcgat gattttaatc ggtaaatgct
    23161 accaaaattt aatggtagat gtgcaagcaa ctaatgaaaa actcaaagct agagcaattc
    23221 ggattgtgat gcaagcgaca gaatgtgaac gagaagtggc tgaagataca ctaaaattag
    23281 ccgaaaataa cgctaaattg gcaattatga tgattttagg taacttagat aagcagaaag
    23341 ccgaagattt attaagccaa aatcaagggc gattacaaaa agcgttaaaa tagaagtatg
    23401 tctgctctcc ccttgtggga gagagacaga tcaatcattc attcagaatg attgatcaga
    23461 gagaggggag gcagatttaa gcaaataaat ggcgatgttt cactagttct tctttggtta
    23521 aactgaacac ccctaagcca ccgtgttcaa attccagcca gttaaacggc acactgggga
    23581 attgttcgat taaatgcacc atactgttgc cgacttcgca gactagcacg ccatcatcat
    23641 ttaagtaatc agcggcttga gcaagaatcc gcttggttaa atctaaccca tctttgcccg
    23701 agccaagagc taatgccggc tcgtgatgga actcttcggg catatcgcct aagtcttctt
    23761 catcaacata aggcggatta gtcacaatta agtcgtattt atcttgcggt aaattgttaa
    23821 acagatcgga acagatcggg aaaactcggt gagacacctg atgacgctca atattaattt
    23881 gagcaacgtc taaggcatca agggaaagat caaccgcatc gacttctgct tccggaaaac
    23941 gctcggcaca ggcaatcgca atacaaccgc tgccggtaca catatctaaa attcgatgtg
    24001 gctcgttttt gataatgcct ttaaaccctt ttttgatcag ctcaccaatc ggtgaacgtg
    24061 gcacgatcac acgctcatcg acataatatt caccgccaca aaaccaagcc gagttggtaa
    24121 ggtatgctac aggtttgcga gagcctaaac gctcacagat taaattgatg atacgttctt
    24181 tctcaactcg agttaagcga gaggaataaa gtgtttccgg tacatcaaac ggcaaataaa
    24241 gccctgccaa cactaattgt tgtgcctcgt cccacgcatt atcgtagccg tgcccgtaat
    24301 aaagatcaga ggcattaaaa tagctatacc cccaacgcat catatcttga atagtgacta
    24361 aatcattcac aatgggcagg gcggaaattt catcaagaag ttcggtatta tatttaaaca
    24421 ttggcgtgcc ttttttcgta ttgttaaaat ggctgtgtta taccacattt tgctttgtgt
    24481 tagaatgtaa aaatgaataa gaaggaaaag ataatgaacg atacgttatt agacgatgaa
    24541 tttgcattat tcagagaggc agcaaaaggc acgaaaaagc tgacacaaaa tacctttgtg
    24601 ccgaaagcgg aacctcgcaa gaaattgcaa gaattgcgag aattaaaaga aaaagctgat
    24661 acagaatttt atttctcgga tgaatatgag cctttgctga aagaagaaaa tgaaaaagtg
    24721 aaatatctgc gagaagatgt tgatccttat attctcaaac agttacggcg aggcgatttc
    24781 caacccgagc tgtttttaga tctgcatggt ttaactcgag aaaaagcgaa gaaagagttg
    24841 gcagcgttga ttttagcctg tgagcgggaa aaggtatatt gtgccagtgt gatgaccggc
    24901 tttggcactc gcacgctcaa agatcaaatt ccacgctggt tggttcagca cccaaaagta
    24961 atggcgttgc accaggcccc gaaagagtgg ggcggagatg cctctattct aattttggtt
    25021 gagcagcctg aaaatcctga aaaaatgttt gggcgttaaa attcggctga attgccaatt
    25081 ttttattaaa aacgaccgct tgtgtatcat taaggagaaa tgatgtcaga acaaactttc
    25141 caccaactta cagcattatt agattcgcat cgagctcgct atcgagtggt aggacatcct
    25201 tctgccggga aatcggaaga agtggcaaaa attcgaggaa cagaaatcgg gcaaggggcg
    25261 aaagccttag tttgcaaggt aaaaggcaat ggggtaaagc aagctgtgct tgctatatta
    25321 cctgctgatt accaagcgga tttaacaaaa attgcagagc atcttggtgg gttaagagcc
    25381 tcacttgcca gcccggctga agtggcagaa ttgaccgatt gtgtatttgg ggcaattccg
    25441 ccgtttagct ttcaccccga tttattattg gtggctgagc caagtctgtt tgagcgttat
    25501 gctgaattag cctttaatgc cggtacgttg gaacgttcga ttattctgaa taccgaggat
    25561 taccaaaaga tagttaatcc tgtgttggtt caattcgcca aaagctaggt tatggggcga
    25621 aaaactccac gattttgcca atagcgatat ccattaattt agggttagaa aaagcgtgat
    25681 ctgccccttc aatcgggagc agttcaatca cgttattatc ggcaaactgc tgtgaagtgc
    25741 ttaacgccac catttcatct tccgtgccgt gcagaattaa aatttgctcg gcataatcca
    25801 aataatcgtt ttgggtaata tcggttagct catcaaaaaa ggcttggctg attttcatct
    25861 ggcgatcaaa cccccacaaa atttctcgcc ctttggcaag tttttgccgt tcctcttctg
    25921 acaagcggtt cattaacgaa tggtagattt gtactgccgg tgcccgcaat gcaattttcc
    25981 gaaacggatt gcctttttcc gccagatatt tcaaggttaa atagccgcca aaactagtgc
    26041 cgtaggcata cagattttta gcattcaggc tggttttggc ataatcaatc accagttgca
    26101 gataagtaat ggattcctca accgagagtt ttttacgggc atcatcaccg tggcaaggga
    26161 aatcaaaggc aagggcagcg tagcctttat attttgagct aaggcgttcc ccaaatttgg
    26221 tattcgattt cagatcttta gacgaaccaa agccgtgcaa cacaatcact acattctcga
    26281 tctgctgcaa ttctttttca taaaacagtt tacagcgaat gctgagaccc tgttcattaa
    26341 tctcaaagcg tttttccatt ttatgttaag tattgaaatt gaagatgaca aaattttagc
    26401 actatttgag tgcaagcggt cggatctctc gcaaaatttg caaattttcc ggtaaattta
    26461 accgcttgta ctagccaaaa tttaagcata tttatagaat acagccttcg tttttaaaag
    26521 gagaaatgaa atgttacaac ttattttagc gattttatgt agcgtgactg taggcgtgtt
    26581 gattaaattc gcccgccaaa aagggattcg tatcgaccaa agtattgcgg tgaactatat
    26641 cgtgactacc acgatgacgt ttttattact aaaaccggat taccaagggc agtcgattac
    26701 cgatattatt gctaataacc cgacttccta tatttttgtg attttaagta tcacattgcc
    26761 tactattttc ttggtgcaag caaaagccct agagtttgcc ggtattatcc gaaccgatgc
    26821 ggcacaacgt ttatcgctgt tcctgccgat tttggcggca ttcaccattt ttggtgagca
    26881 ggttacgcaa aataaattaa ttgcacttct gttagctttc gtggcactcg gttgcttatt
    26941 atggaaaggc aatcagggaa tggaaaaagg cggaaaaatt gcgattatca gccttgctct
    27001 ggtttgggta ggctatggcg tgaacgatat tttatttaaa cagattgcca aatcaggctc
    27061 tgctttccct gtcacccttt cgattgcctt tatcggtgca ggctgtttta tgtttatcta
    27121 tttgctactt aaacgcactc aatggcacgt tccaagtgtc ttaaccggct tattgctagg
    27181 cgtgttgaac ttcggcaata ttctgttcta tattcaagct caccaagcca tgaaagatga
    27241 cccaacttta gtcttcactg gaatgaactt aggggtaatt tgcttaggca ctttcgttgg
    27301 agcattcttc tttaaagaga aaatccacaa agtgaactac ttaggcgtgg cgattgcgat
    27361 tgtggcgatt atttgcttgt tttattggcg gtaaatatac tttccaaaat taagggcgaa
    27421 cataatgttc gcccttaatt tttgagtaat atagtgtaaa atattcaata aattcgaccg
    27481 cttgttgtac cgattcatat ttcataaagg acaaaaaatg aagctaaaag ccttatctac
    27541 actcattgcc tcttcaatgc tatatagtca gagttttgct gtaccgccgg aaaaaacagc
    27601 tgaagagcca cagccctttt tcaataaaac cgaatctggg tatgatttag tctttaatga
    27661 tcaaaactat cgtttaattg aaacggaatt aaatggcgag aaaatccaat tccgtgcctt
    27721 tgagcggatt gtgtatgtga acaatccgat tgagccagat taccaaacaa ttaatctgta
    27781 tgtgccggaa gcttactaca ataatggcga aatcaatggc taccaagcgg ataccgcccc
    27841 gatcttcttg ccaaattcag tggggggcta tatgccggca aaagcggcaa gttatgataa
    27901 aaaaagacgt gacggttcac caggtacgat tttggtggcg ttatctaaag gctatgtggt
    27961 ggcaagtgtg ggagcaagag gacgcacgct acaaaaagag ggaaaataca ccggcaaagc
    28021 accttctgcc attattgatt caaaatccgc cgcccataaa gcgtgtcggt tcgagtccga
    28081 ccactggcac cactcactat gtaaaattta gttttacata gtttgctgta agcatttg
//
LOCUS       DANLXO010000020        27424 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.020, whole genome shotgun sequence.
ACCESSION   DANLXO010000020 DANLXO010000000
VERSION     DANLXO010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 27424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27424
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.020"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            71..1297
                     /locus_tag="PXD69_000744"
     CDS             71..1297
                     /locus_tag="PXD69_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDL6282965.1"
                     /translation="MAMPSQRFSLTWVLNLFGTAVGAGVLFLPINAGMGGFYPLIIMT
                     LLVGPMTYLAHRGLTRFVLSSKYKGSDITAVVREHFGEQAGKLITLLYFFAIFPILLI
                     YGVGITNTVSSFMENQLHIAPPSRAVLSFMLIAAMIGVMLLSEQVMLKITTCLVYPLV
                     LILLGLSIYLIPQWNTAALQQMPTTGDFLTTLWLTIPVLVFAFNHSPAISSFALSQQK
                     YYQDDKKAEIESAKVLRSTAFILVLFVMFFVFSCVLTLTPEELAQAKVQNISILSYLA
                     NKFDNPIISYFGPLVAFLAIGSSFFGHYLGAREGLEGLVNQMRKEPIDPSKFRKITAI
                     TFLIILWIVATINPSILGFIESLGGPIIAMILFIMPVYAVYKVPALARFKGEFGHLFV
                     LVMGCIAISAIVYGLL"
     gene            1354..2730
                     /locus_tag="PXD69_000745"
     CDS             1354..2730
                     /locus_tag="PXD69_000745"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDL6282966.1"
                     /translation="MISVFDMFKVGIGPSSSHTAGPMKAAKEFVDELQNRKFLNKIDR
                     LRVDVYGSLSLTGRGHNTDIAIIMGLMGYLPHNVDIERIEQTIENLKQNKQLIIAESS
                     VEPKVIAFDFYEDMPFHRDFLPRHENGVKFSALSGEELLFQNTYYSIGGGFIVDEANF
                     EQVKNSDLSVPFPYQNAADLLAHCKNNGLPLSSLVWKNELALRSRVEISDYLAMIWNT
                     MEACIERGLNTEGLLPGPLKVVRRASGLRRMLEANSKFNTDPMQIIDWVNMFALAVNE
                     ENAAGGRVVTAPTNGACGIVPAVLAYYQKFIAQLNQDTIERYLLTTSVIGSLYKMNAS
                     ISGAEVGCQGEVGVACSMAAAGLTEIMGGSAEQVCMAAEIAMEHNLGLTCDPVGGQVQ
                     VPCIERNAIASVKAINASRMALRRTSSPQVSLDKVIETMYETGKDMNAKYRETSTGGL
                     AIKILPCD"
     gene            complement(2785..4374)
                     /gene="purH"
                     /locus_tag="PXD69_000746"
     CDS             complement(2785..4374)
                     /gene="purH"
                     /locus_tag="PXD69_000746"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDL6282967.1"
                     /translation="MAIQQALLSVSDKKGIVEFARGLSARGVKLLSTGGTAKLLAEAG
                     LLVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGTDDEVMNQHGIERIDMVVVNLY
                     PFAQTVANPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVNNNDFDAILAEMDQHQ
                     NSLTLETRFNLAIKAFEHTAQYDSMIANYFGQKVPPYQGAEEEDLTQPSGQFPRTLNL
                     NFVRKQTMRYGENSHQNAAFYVENELKEASVSTAKQLQGKALSYNNIADTDAALECVK
                     EFSEPACVIVKHANPCGVALGKNILDAYNRAYQTDPTSAFGGIIAFNRELDGETAQTI
                     ADRQFVEVIIAPTVSASAKEVLATKKNVRVLECGEFSEAVKRLDFKRVNGGLLVQDAD
                     QGSVSIDDLKVVSERKPTEAELKDLLFCWKVAKYVKSNAIVYAKDGQTIGIGAGQMSR
                     VYSAKIAGIKAEDEGLQVVGCVMASDAFFPFRDGIDAAAKVGITCVIHPGGSMRDQEV
                     IDAANEHGMAVVLTGMRHFRH"
     gene            4546..4815
                     /locus_tag="PXD69_000747"
     CDS             4546..4815
                     /locus_tag="PXD69_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL6282968.1"
                     /translation="MINHNLADFVFEYFTENNLKAGTLRYRYIKENVIDAYSTRVDDA
                     FQGKGIAGELYNALIAFAQEKGLKIKPSCSYIEVKMQRSHRDLIA"
     gene            complement(4902..6347)
                     /gene="dacB"
                     /locus_tag="PXD69_000748"
     CDS             complement(4902..6347)
                     /gene="dacB"
                     /locus_tag="PXD69_000748"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HDL6282969.1"
                     /translation="MIFKNFTRAFLNKFILSTLLIPSITQAEINTEELLNTLPAGTSV
                     SFIAKNLDTNQIITQYQSDIFMLPASTQKVFTALAAKLTLNDDFRFQTALLTNGKVEN
                     GVLKGNLIARFSGDPELTSGQIYQLMSKLKQQGINKIEGDLILDPSVFASHDKASGWI
                     WNDLTMCFNAPPAAINVDHNCFYVTLNADQPIGEFAKVNVPSAYPVQVFSSAYIVEPK
                     EAPFCQLDVVVHDNNRYQIKGCMARQSQPFGLSFSVQDPTNYGANMLKAQLKSLKIAF
                     NGQVKEPLTAQNGTLLAEHYSEPLPVLLKKMMKKSDNQIADALFRTVANKQHNRPASF
                     QLGSYVIRQLLKTKANIDFKNSVVADGSGLSRHNQVSSRTMLETLEYIAQNEESLKLF
                     ETFPIAGVDGTISGRGSISTEPLAKNLIAKTGSLKGVYNLAGFMKNARGERIAFVQFI
                     NGYSTGELESKTKRAPLNTFENKFYMALFNE"
     gene            6444..6920
                     /gene="greA"
                     /locus_tag="PXD69_000749"
     CDS             6444..6920
                     /gene="greA"
                     /locus_tag="PXD69_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDL6282970.1"
                     /translation="MKQIPMTVRGAEQLREELDFLKNVRRPQIIDAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIQEIEGKLGNAQIIDVTKMANNGKVIFGATVQLVNADTDEE
                     VTYRIVGDDEANIKEGLISVNSPIARGLIGKEVDDSVSITTPGGKVEFDIVGVEYI"
     gene            complement(6976..7392)
                     /gene="ndk"
                     /locus_tag="PXD69_000750"
     CDS             complement(6976..7392)
                     /gene="ndk"
                     /locus_tag="PXD69_000750"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDL6282971.1"
                     /translation="MIQQTLSIIKPDATRRNLIGKILAQLEENGLTIKALKKVHLTRE
                     QAEGFYAEHKGKDFFEPLVEFMTSGSIVVSVLEGENAISHYRALMGATNPDNREKGTI
                     RDLYALSMRENSVHGSDSEESAKREIAYFFVPSEIV"
     gene            complement(7402..9480)
                     /gene="metG"
                     /locus_tag="PXD69_000751"
     CDS             complement(7402..9480)
                     /gene="metG"
                     /locus_tag="PXD69_000751"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDL6282972.1"
                     /translation="MANQKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGN
                     EVHFVCADDAHGTPIMLNADKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEE
                     NRQITTDIYKTLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE
                     VCASTYSPMDLINPRSAVSGATPVVKESEHFFFDLPSFEGMLKEWTRSGSLQPEIANK
                     MQEWFESGLQQWDISRDAPYFGFEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDF
                     DEFWQKDSTTELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSK
                     SRGTFIQANTYLKHLDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLA
                     SRNASFIAKRFEGKLAEKLDDEALFNEFTAQAETIANFYENREFNKAIRAIMELTDKA
                     NKYIDDKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQSE
                     LRWDNIATPLFGHTVAPFKSLFSRLEKKQIDAVIDETKALFAEANKKTENQTKGTQKV
                     EQQAVEKQENIAVEPISPEITIDDFAKLDLRAAKVLNCEAVPKSDKMLRFELDLGDHQ
                     RQVFSGIKAAYPNPEALIGRFVIVIANLAPRKMSFGMSEGMILSAGTGGANLFLLDAD
                     SGVQPGMQVK"
     gene            9692..10663
                     /gene="menC"
                     /locus_tag="PXD69_000752"
     CDS             9692..10663
                     /gene="menC"
                     /locus_tag="PXD69_000752"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDL6282973.1"
                     /translation="MRQVKLYRYQLPIQTGVVLRKQPLKERQGVLVCLQEQEKVGWGE
                     IAPLPSFSQESLEQAENQAVNWLKAWQKGEPETLEQLFPSVAFGLSCALAELNNELGE
                     QANNQSAVLCYGDLEKLHTAFSQHTNPIGKIKIGLNPEQEGEQANLLLHTFPNLRLRL
                     DANRLWSLEQAVKFAEKIANEHKPRIQFIEEPCQALELSRQFATQTDIAIAWDETVRE
                     ANFLVKKEPNLTAIIIKPTLVGSLEKCVNLIQQAQKQGLVAVISSSLESSLGLTQLAR
                     IAQQYTPNSVPGLDTLNLMQHQLLRDWHDSSLPLVGLESEFVREVVV"
     gene            10908..11609
                     /gene="rsuA"
                     /locus_tag="PXD69_000753"
     CDS             10908..11609
                     /gene="rsuA"
                     /locus_tag="PXD69_000753"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HDL6282974.1"
                     /translation="MRLDKFIAENTGLTRSQAAKVLKSGVVTVNGNIEKSGAAKISQE
                     DEIYYEDQKLEWVEEGQYFMLYKPQGYICSHDDGEYPTVFQFFDYPLMTKLHTAGRLD
                     VDTTGLVLLTDDGKWSHRITSPKHHCEKTYLVTLADPVEDFYAQRLAEGILLRGEKEP
                     TLPAQLEILDDYNVNLTISEGRYHQVKRMFAALGNKVEALHRWRIGDVVLDERLEEGE
                     FRSLTSEEIASFNGK"
     gene            11599..12780
                     /locus_tag="PXD69_000754"
     CDS             11599..12780
                     /locus_tag="PXD69_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HDL6282975.1"
                     /translation="MESRRPSLSFFIILGMMAMLPPLAIDMYLPSFLDIARDLAVSQE
                     KVQTTLAVFTLGFGAGQLFWGPMADSFGRKIIILIGLVGSAIAAYFLTQVQNIETFYL
                     LRLVQGLCAAAPAVVLGALVRDLFERNLFAKLMSVIMIISMLAPLLAPIVGGYIAKYF
                     HWHSIFYVLVAMGILCVVLISWKIPETLAPEKRLPLSFGKTLSNFAILLKHRPTLGYV
                     LIGGLTFAGIFCFLTSGSIVYIGLYGVSQENFGYFFGLNMIVMVTMTAINSKMVVKVG
                     SETMLRIALAMQLLAGIWLALVAIFDLGFWAMAIGIPLYIGMLSTIGSNASAAILEQF
                     PQMAGTANGVAGTARFGVASLVGAGLSHIAVTSAAPMLLAMALCVMLAGVVYYFLCYK
                     R"
     gene            complement(12920..14239)
                     /gene="rlmD"
                     /locus_tag="PXD69_000755"
     CDS             complement(12920..14239)
                     /gene="rlmD"
                     /locus_tag="PXD69_000755"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDL6282976.1"
                     /translation="MAIFYSEKSAKKPIKSPACQKATIQSLDYQGLGIAKINGKTWFI
                     ENALPDEQVEFKVLEEKRQYGRGQAVKILKKSANRRMPSCELYGQCGGCQMQHISLEL
                     QRKAKQQALFQRLQKLQTHAIDVQPMIIGNDKHYRRRAKLSIAIQQGKAVIGFRLQNS
                     NQIIPLAHCEVLVEPLANLLPKLKHLIENWQQPKKLGHIELVSADNTIALFFRHLGAL
                     SAQDNHNLRQFATQEQLSLFVMTSENHIEHLCGERPYYQIQGLKLHFSIRDFIQVNAT
                     LNEKMVEKALEWLELSNQDRVLDLFCGMGNFTLPIAERAKSVVGVEGVEPMVQQAREN
                     AVTSGLKNVEFYQTNLDEPFSDKPWAKEPFNKVLLDPARNGALFCLDHLTSLNPERIV
                     YVSCNPATLVRDAEKLLQLGYRLEKAAMIDMFPHTGHLESISLFLKS"
     gene            14324..15649
                     /locus_tag="PXD69_000756"
     CDS             14324..15649
                     /locus_tag="PXD69_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase
                     family protein"
                     /protein_id="HDL6282977.1"
                     /translation="MISSVWNERYLADKKREQDHRSPFQRDRARLLHSEAFRCLQAKT
                     QIHAVGEDDFYRTRLTHSLEVAQIGSSLREKLLADVEGFQAVCSEQEFAKNMANLTAL
                     LPDHSLVESLCFAHDLGHPPFGHGGEMALNYKMYAFGGFEGNAQSFRIMTQLEPYTET
                     AGMNLTRRTLLGVMKYPALLSQTSPIEPAEMSEARHINLHHFPQSKGIFDDNNHFFEW
                     VLAPLSEKDRRQFCTVQPNQDPKQPNKTQYKSLDCSIMELADDIAYGVHDLEDAIVGG
                     MVTPQSWQNAEKLLAECQSDWVKQRLPEIREKLFSQHRYERKDVIGALVNHFITNVRW
                     KALPEFDEPLLRYNAYLPESVACVLKILKDFVYQYVICDAKTQRVERKGQRILMELFD
                     ILSSDPMRLLPNNVRERWKNAEESKRARVICDYLAGMSDGQAFKLFESL"
     gene            15770..16069
                     /locus_tag="PXD69_000757"
     CDS             15770..16069
                     /locus_tag="PXD69_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282978.1"
                     /translation="MRFLPSEIYQPRGELVKADRQGNGEFEVEYRVSGNDVRGLAKSA
                     IAHAKRKGFHLVESDIHRDDADLKFKRGDQELDIEIEVKGRNRIEYKADLDLDKN"
     gene            16230..19142
                     /gene="rapA"
                     /locus_tag="PXD69_000758"
     CDS             16230..19142
                     /gene="rapA"
                     /locus_tag="PXD69_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HDL6282979.1"
                     /translation="MFLVGQRWLSESENNLGLGIVTSVDHRTVTINFPAAEEERVYAI
                     AVAPLTRVQFQAGDRINSIDGWQLEVSEVVENQGAVIYLGKRVDNGEEAVLPEMLLDH
                     KISFSKPQDRLFSAQIDRSDRFALRFNALQHQQAQYQSPLRGLRGIRASLIPHQLHIA
                     KEVGQRLAPRVLLADEVGLGKTIEAGMILQQQLFSGRAERVLVLVPESLQHQWLVEML
                     RRFNLKFSLFDEERCSDFDKQDENGDDVSENPFESEALVITSLNWLETSPQRANQVLA
                     ADWDLLIVDEAHHLEWSETESSIGYQLVERLSQQIPAVLLLTATPEQLGQESHFARLA
                     LLDSDRFYDYAEFVQEQAQYKPVADAVSSLLSDKPLSNDEQNAIAELLSEQDTEPMFR
                     AINSKKSDENDRLQARQELISELIDRHGTSRVLFRNTRQGVKGFPHREYHQISLEMPK
                     QYQNALKVMGMMGSVSQSDLLYPEYLFQRMNPNAKWAEFDPRIDWLITFLKNHRDEKV
                     LVICKQADTAIALEQVLREREAIRSAVFHEKMSIVERDKAAAYFAQQEEGAQVLISSS
                     IGSEGRNFQFAKDLVLFNLPDNPDLLEQSIGRLDRIGQKNDIQIYVPCFNLSAQQMLA
                     EWYHKGLNAFEETCPMGTAIFRELGEELQQFLQKPELSAQFDDFVAKTYKRQQYLKAE
                     LEKGQDRLLELNSNGGEAAQQLANDIAKEDNNPQLVNFALSLFDVIGVEQEDLGEQSI
                     VISPTGHMLVPDFPGLSEDGTTITFNRELALMREEVEFLTWDHPMIRNGIDLITSGDI
                     GKSAISLLVNNKLPAGTLLLEALYVVEAQAPKGLNLTRFLPPTPIRVLVDNKGNNIAP
                     QVSFAGLERQLKPVNKQMANKIAKMARADIEKLIKASEKAVEPQVQQVIETAKFEANS
                     KLKAELHRLESLKMVNKNIRADEVEALEQQLNASLAQLETANYRLDSLRVIVSNKA"
     gene            19269..19565
                     /locus_tag="PXD69_000759"
     CDS             19269..19565
                     /locus_tag="PXD69_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL6282980.1"
                     /translation="MYIDLQYAVPLLFEYDPNKSQINLAKYGIDFEQAKLLWEDERKV
                     VLEACIEPELRYFLIGKIYDKYWTAFFTPRNDVIRLISVRRSRKKEISYYEKYH"
     gene            19549..19791
                     /locus_tag="PXD69_000760"
     CDS             19549..19791
                     /locus_tag="PXD69_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HDL6282981.1"
                     /translation="MRNTISAEELERIFDEGKEDILQYCDLSTAHRPGQMKRVNVDFP
                     NWMVEALDKQARHLGVPRQALIKMWIAEKLPVQSPR"
     gene            19803..20471
                     /gene="rluA"
                     /locus_tag="PXD69_000761"
     CDS             19803..20471
                     /gene="rluA"
                     /locus_tag="PXD69_000761"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HDL6282982.1"
                     /translation="MALIEYNPPLEPFLDEVYRDNHILVINKPSGLLSVPGNRPEYYD
                     SAMTRVQQKYGFTEPAHRLDMATSGILLFALSKAAEKELKRQFREREPKKHYIALLWG
                     KLGEKVGDKGEMNFPLICDWENRPRQKICYERGKKAITHYEVLAHYPNNIARVKLTPI
                     TGRSHQLRVHSLALGHPIIGDKFYANPLAKSLSPRLCLHAESLTITHPITRELMTFTA
                     EPTF"
     gene            complement(20449..21024)
                     /gene="ampD"
                     /locus_tag="PXD69_000762"
     CDS             complement(20449..21024)
                     /gene="ampD"
                     /locus_tag="PXD69_000762"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HDL6282983.1"
                     /translation="MPNLKIEQGCLTGQKQVPSPHFSQRPDQEDISLLVIHYISLPPE
                     EFGGNFIDLFFQGKLEPTAHPYFEEIKDLRVSAHCLINREGEITQYVNFNDMAWHAGV
                     SCFEGREKCNEYSIGIELEGSNNQPFTQAQYQSLANLTKAIQQSYPQITDERITGHCH
                     IAPERKIDPGQYFDWAYYKHLLNEAKKSAQQ"
     gene            21084..21926
                     /locus_tag="PXD69_000763"
     CDS             21084..21926
                     /locus_tag="PXD69_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HDL6282984.1"
                     /translation="MLSYRHSFHAGNHADVLKHIVQLLILRALKEKEKGFLYLDTHSG
                     VGRYSLLSFESEKTGEYLEGVARLWERDDLPEEVAFYIDELKKLNRGGKLKYYAGSPL
                     LAVQQLREQDRAILTELHPNDFPLLRQEFAKAKNVQTKRENGFQQLKSALPPKERRGF
                     VLIDPPYELKEDYELVVKAIEEGYKRFATGVYAIWYPVVLRQHTKRIVRGLMDTGIRK
                     ILQIELAVRPDSDQRGMTASGMIVINPPWQLETQMKKILPYLTEVLVPEGTGSWKVEW
                     ITPE"
     gene            22049..22690
                     /gene="pyrE"
                     /locus_tag="PXD69_000764"
     CDS             22049..22690
                     /gene="pyrE"
                     /locus_tag="PXD69_000764"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDL6282985.1"
                     /translation="MQQYKHDFIEFALSRNVLKFGEFTLKSGRISPYFFNAGLFNTGR
                     DLAKLGEYYAKAIQASGIEYDVLFGPAYKGIPIATTVAVALANLFDVDKPCCFNRKEA
                     KDHGEGGNLIGSPLTGKILLVDDVITAGTAIRESMEIINANNAQLAGVLIALNRKEKG
                     KGELSAIQEVERDYGCQVFSIVDFDDLVAFIETSPQYAPYLPKMREYREKYGV"
     gene            22864..23953
                     /locus_tag="PXD69_000765"
                     /pseudo
     CDS             22864..23953
                     /locus_tag="PXD69_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607068.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
     gene            complement(24018..25208)
                     /gene="metC"
                     /locus_tag="PXD69_000766"
     CDS             complement(24018..25208)
                     /gene="metC"
                     /locus_tag="PXD69_000766"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HDL6282986.1"
                     /translation="MSNYKNLSTKLVHTGRKKRNTQGAVNPVIQRASSLVFETLEEKK
                     HATQNRYKGALFYGRRGTLTHFSLQEAMCELEGGAGCYLYPCGAAAVTNAILAFVEQG
                     NHVLMTGAAYEPTQEFCNALLKRMGVSTTYYDPMIGEGLKALVQPNTKVLFLESPSSL
                     TMEVPDIPTLVRVAREINPEIVIMIDNTWSAGVLFPALEYGIDISIQAGTKYLVGHSD
                     VMIGTAVSNARCWDKLREGSYLMGQMVDADSAYITARGLRTLGIRLKQHEQSSIAVAN
                     WLAQRPEVKAVYHPALESCPGHEFFKRDFLGSSGLFSFELCEKLSNDKLANFLEHFEL
                     FSMAYSWGGFESLILANQPEEIAKIRPAIERKLTGTLIRIHVGLEAVEDLIADLEQGF
                     NRIR"
     gene            complement(25267..25806)
                     /gene="dsbB"
                     /locus_tag="PXD69_000767"
     CDS             complement(25267..25806)
                     /gene="dsbB"
                     /locus_tag="PXD69_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HDL6282987.1"
                     /translation="MLYFFKNLSQSRSAWFLLMLSCLILEGTALYFQHGMGLVPCVMC
                     IYERVALFGILFAGILGFLGNRYAIIRYLAILIWLGSAFKGLVLSIKHHDYQVNPSPW
                     NQCEFKVNFPQTLPLDQWLPQVFAPGPVNCSQSQWEMFGFSMAQWLIFTFAVYLIVAV
                     IVLISQFKRSRQRNNFMFR"
     gene            complement(25869..27410)
                     /gene="nhaB"
                     /locus_tag="PXD69_000768"
     CDS             complement(25869..27410)
                     /gene="nhaB"
                     /locus_tag="PXD69_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton antiporter NhaB"
                     /protein_id="HDL6282988.1"
                     /translation="MSSIDALFKSFLGKSPEWYKLCILAFLIINPLIYFFINPFVAGW
                     FLVAEFIFTLSMALKCYPLQPGGLLAIEAVVIGMTNPHHIKEEIMANFDVILLLMFMV
                     AGIYFMKQLLLYIFTKLLVAIHSKKILSLSFCLSAAFLSAFLDALTVIAVIISVGTGF
                     YGVYHKVASGNNFEDSTDITNDEKIISNKEILEQFRGFLRSLLMHAGIGSALGGVMTM
                     VGEPQNLIIASQAEWGFIEFLLRALPVSLPVLICGIATCFLVEKYKLFGYGDRLPSKV
                     WGVLARYSQLKEQKMTKQDRLKMLVQAIAGIWLIIGLALHLADVGIIGLTIIIICTAF
                     CGITDEHTLGKAFQESMPFTALLIVFFSVVAVIIDLKLFEPIIAFVLSAEPHSQLSLF
                     YIFNGLLSMISDNVFVGTVYINEAKTALDAGIIDREQFDLIAVAINTGTNLPSVATPN
                     GQAAFLFLLTSSFAPLIKLSYGRMVYMALPYTIVLSIVGFLGLEFLLPSMTEVMINWG
                     WFITR"
BASE COUNT         7917 a         5425 c         6155 g         7927 t
ORIGIN      
        1 cttgttgtgt tactgtttcc catcgctaat atagcatagc ttgttagata attctttaaa
       61 ggagattact atggctatgc catctcaacg tttttctctt acttgggtac taaatttatt
      121 tggtactgcg gtaggagccg gcgttttatt tttgccaatt aatgcaggta tgggtgggtt
      181 ctacccactt attattatga ctttgttagt tggaccaatg acatatttag ctcaccgtgg
      241 cttaacacgt tttgtgcttt cttcaaaata caaagggagc gatattacgg ctgttgttcg
      301 tgaacatttt ggtgaacagg ccggtaaatt gatcacgcta ctgtacttct ttgccatttt
      361 tccgatttta ctgatttatg gtgtaggtat taccaatacc gtgagttctt ttatggagaa
      421 tcagcttcat atcgcgccac catctagggc tgtattatcg tttatgctaa tagctgctat
      481 gatcggagta atgttattaa gtgagcaagt catgttaaaa atcacaactt gtcttgtgta
      541 tccattagtg ttgattttat tgggcttatc tatttattta attccacagt ggaatacagc
      601 tgccttacag caaatgccaa ctacaggaga cttccttact acactttggc tgactattcc
      661 tgttttagtc tttgctttta accattcacc ggctatttct tcttttgcac tttctcaaca
      721 gaaatattac caagatgaca agaaggctga aattgaatca gctaaagtat tacgttctac
      781 cgcctttatc ttggtgttat ttgtgatgtt ctttgtattt agctgtgtat taactttgac
      841 acctgaagaa ttagcacaag ctaaagtgca aaatatttcg attctttctt accttgcgaa
      901 taaatttgat aatccgatta tttcctattt tggaccgttg gttgcttttt tggcgattgg
      961 tagctctttc tttgggcatt atttaggtgc gcgcgagggg ttagaaggat tggttaatca
     1021 aatgcgtaaa gagccgattg atccaagcaa attccgcaaa attaccgcta ttactttttt
     1081 gatcatttta tggattgttg cgactatcaa tccaagcatt ttaggcttca ttgaaagcct
     1141 tggtgggccg attattgcga tgatcttgtt tattatgcct gtctatgccg tatataaagt
     1201 accggcactt gcacgtttta aaggtgaatt tggccattta tttgtgcttg ttatgggttg
     1261 tattgctatt tcagcaatag tatatgggtt actgtaatct ttctaaaatc aatgtagaat
     1321 acgccctttt attttctatg tgaatttgtg tttatgatta gtgtatttga tatgtttaaa
     1381 gtagggattg ggccttccag ttcccatact gcggggccga tgaaagcggc aaaggaattt
     1441 gtcgatgaat tacaaaatcg caaattttta aacaaaattg accgcttgcg ggtagatgtc
     1501 tatggttcat tatcactcac cgggcgagga cataatacgg atattgccat cataatggga
     1561 ttaatggggt atttgcctca taatgtggat attgaacgta ttgagcagac gattgaaaat
     1621 ctaaaacaaa ataagcaact tatcattgct gaaagcagtg ttgagcctaa agtgattgcg
     1681 ttcgattttt atgaggatat gccatttcat cgagatttct tacctcggca cgaaaatggt
     1741 gtgaaattta gtgccttgag cggtgaagag ttgctatttc aaaacaccta ttattctatt
     1801 ggtggtggct ttattgttga tgaagctaac tttgagcaag ttaaaaattc agatctttct
     1861 gttccattcc catatcagaa tgcagcagat ttacttgcac attgtaagaa taacgggtta
     1921 ccgctttctt ctttagtctg gaaaaatgag cttgctttac gcagtagagt agaaatttcg
     1981 gattatttgg caatgatttg gaatacaatg gaagcctgta ttgagcgtgg tttgaatacg
     2041 gaagggttac tacccgggcc tctgaaagtg gtacgccgtg ccagtgggct acgcagaatg
     2101 ttagaggcaa acagtaaatt caataccgac ccaatgcaaa ttatcgattg ggtgaatatg
     2161 tttgcccttg ccgtgaatga agaaaatgcg gcaggtgggc gagtagtcac cgcacctacc
     2221 aatggagcct gtggtattgt tccggctgtg ttggcgtact accaaaaatt tattgcacag
     2281 cttaatcaag atactattga gcgttattta ttgactacca gtgtgattgg ttcgttatac
     2341 aaaatgaatg cctctatttc cggtgctgaa gtaggttgcc aaggggaagt tggtgttgct
     2401 tgttcaatgg cggcagcagg tttaacggaa attatgggtg gcagtgctga acaggtgtgt
     2461 atggctgcag aaattgcaat ggagcacaat ttaggcctaa cttgtgaccc tgttggcgga
     2521 caagtgcaag tgccttgtat tgaaagaaat gcaatcgctt cagtcaaagc gattaatgcc
     2581 agcagaatgg cactacgccg tacttcttcg cctcaggtaa gtttagataa agtcattgaa
     2641 acaatgtacg aaaccggcaa agatatgaat gcaaaatacc gtgaaacctc aaccggtggc
     2701 ttagcaatca aaattttacc ttgtgattaa ttaatgaaaa aggctacctt atcaaaataa
     2761 ggtagccttt tagtttgtag aacattaatg acggaaatgc ctcattccgg ttagtaccac
     2821 tgccataccg tgttcgttgg cggcatcaat cacttcttga tcacgcattg aaccacctgg
     2881 gtgaatcaca caagtaatcc ctacttttgc agcagcgtca ataccatcac ggaacgggaa
     2941 gaacgcatcg gaagccatta cacaacccac aacttgtaag ccctcgtctt ccgctttaat
     3001 acctgcaatt tttgcggaat aaacacggct catctgccct gcaccgatac cgatagtttg
     3061 cccgtctttg gcatacacaa tcgcattcga tttcacatat ttcgccactt tccagcagaa
     3121 caataggtct tttagctcag cttcagttgg tttacgctct gaaaccacct ttaaatcgtc
     3181 aatagataca gagccttggt cggcatcttg cactaataat ccgccgttta cccgtttgaa
     3241 atctaagcgt tttacagctt ctgagaactc gccacattca agcacacgca cgtttttctt
     3301 agtggctaac acttctttgg cagaagcaga aacggttggt gcaataatca cttcaacaaa
     3361 ttgacggtct gcgatggttt gagcagtttc gccgtctaat tcacggttaa aggcaataat
     3421 gccaccgaaa gcagaagttg gatcggtttg gtaagcacgg ttgtaggcat ctaaaatatt
     3481 tttacccaaa gcaacaccac aagggttagc gtgttttaca atcacacaag caggctcgct
     3541 aaattctttc acgcattcaa gagccgcatc ggtatctgca atattattat acgaaagggc
     3601 tttaccttgt aactgtttgg cggtggaaac agaggcttct tttaactcat tttcgacata
     3661 gaatgcagcg ttttgatgcg aattttcgcc ataacgcatc gtttgtttac gcacaaaatt
     3721 gaggtttaag gtgcgaggga attgtccact tggttgggtt aaatcttctt cctcagcccc
     3781 ttgataaggc ggcacttttt gcccgaaata gttggcaatc attgaatcgt attgtgcggt
     3841 atgctcaaac gctttaatag caagattaaa acgggtttct aaagttaaac tgttttgatg
     3901 ttgatccatt tcggcaagaa tagcatcaaa atcattgtta ttgaccacaa tcgccacatc
     3961 tttatgattt ttcgctgcag aacgcaccat tgtcggacca ccgatatcaa tattttccac
     4021 cgcatcttca aggctacaat ttggattggc aacggtttga gcaaaagggt agaggtttac
     4081 taccaccata tcaattcgtt caatgccgtg ttggttcatc acttcatcat cagtaccacg
     4141 gcgacctaga attccgccgt gcactttcgg gtgcagggtt tttacacgcc cgtccatcat
     4201 ttcaggaaag ccggtgtaat ctgatacttc tgttactagc aaaccggctt cagccagtaa
     4261 ttttgcggtt ccgcccgtag aaagtaattt taccccacga gccgatagcc cacgagcaaa
     4321 ttcgacaatg ccttttttat cagacacact taataacgcc tgttgaatcg ccattcttaa
     4381 attccttaaa atgagtgtta acgtgaaaat aaacggcaaa gattataacg caaacgtttg
     4441 cttttttcat ctacaagtgg tcgattttgc aaatttttct gcaaaatcga ccgcttgcac
     4501 tcgtgattaa agcgggtaga atagaggaaa aaaatcggag gaactatgat taaccacaat
     4561 ttagcagatt tcgtatttga gtattttacc gaaaacaacc taaaagcagg cacactacgt
     4621 tatcgctaca taaaagagaa cgtgattgat gcttacagta cccgagtaga tgatgccttt
     4681 caaggtaaag gtattgcagg agagctttac aatgctttaa ttgcgtttgc gcaagaaaaa
     4741 gggctgaaaa tcaagccaag ttgtagttat attgaggtaa aaatgcaacg aagtcatcga
     4801 gatttaattg cttagagagg agcaagcggt cgtaaaattt caaaaattta cgaccgctgt
     4861 cttattcaat tctcaaaaat ccatcacaca aaatataagc cctattcatt aaacaacgcc
     4921 atataaaact tattttcaaa tgtattaagc ggagcccgtt tggttttgct ttcgagctcg
     4981 ccggtggaat agccgttaat aaattgcaca aaagcgatgc gttcgccacg ggcgtttttc
     5041 ataaagccgg caaggttgta aacccctttc agtgagccgg ttttggcaat cagatttttg
     5101 gcaagcggtt ctgttgaaat agagcctctg ccggaaatag taccgtccac gcctgcaatc
     5161 gggaaggttt caaacagttt taagctttct tcgttttgag cgatatattc aagggtctcc
     5221 agcattgttc ggctgctgac ttgattatga cgggaaagcc ctgagccatc agccaccacg
     5281 ctgtttttaa aatcaatatt ggctttggtt tttaataact ggcgaatcac ataactacct
     5341 aattggaacg atgcggggcg gttgtgttgc ttgttggcaa cggttctaaa cagggcatcg
     5401 gcaatttggt tatccgattt tttcatcatt tttttcaata ataccggcaa cggctcggaa
     5461 taatgctcgg caagtagcgt gccgttttgg gcagtaagtg gctcttttac ttgcccgtta
     5521 aaggcaattt tcaggctttt taactgggct ttaagcatat ttgccccgta attagttggg
     5581 tcttgcaccg aaaaacttaa gccgaacggt tgagactggc gagccataca gcctttgatt
     5641 tggtagcggt tgttatcgtg aaccaccaca tcaagctggc aaaacggagc ttctttcggc
     5701 tcgacaatat aagcagagct aaacacctgc accggataag cggacggcac attcacttta
     5761 gcaaattcgc caatgggttg gtcggcattt aaggtgacat aaaaacagtt gtgatccaca
     5821 ttaattgccg ccggtggggc gttaaagcac atcgtcaagt cgttccaaat ccaaccggag
     5881 gctttgtcgt ggctggcgaa aaccgacggg tctagaatta aatccccctc aattttattg
     5941 ataccttgtt gctttaattt gctcattaat tgataaattt gaccgcttgt aagctcaggg
     6001 tcgccactaa aacgggcaat taaattgcct tttaacactc cgttttctac ttttccgttg
     6061 gttaaaaggg cagtttgaaa gcggaaatca tcgtttaaag ttaattttgc tgccagtgcc
     6121 gtaaagactt tttgggtact ggcaggtagc ataaaaatat cactttggta ttgggtgatg
     6181 atttggttag tgtctaaatt tttagcaata aaactaacag aagtaccggc aggcaaggta
     6241 tttaataatt cttcggtatt aatttcagcc tgtgtaatgc ttggaatcag aagtgtagat
     6301 aagataaatt tatttaaaaa agcacgagtg aaatttttaa aaatcataat aaaaggggag
     6361 ttgaaatttt tagtgagaaa ttgaataata gccctttcgt tttaattcgt aaaccgataa
     6421 tttttagtaa ggaaatagat ttaatgaaac aaattcctat gacggtgcgt ggtgcagagc
     6481 aactgcgtga agaattggat tttttaaaaa atgtgcgtcg cccacaaatt attgatgcga
     6541 ttgcagaagc ccgtgaacac ggtgatttaa aagagaacgc ggagtatcac gcagcccgtg
     6601 aacaacaagg tttctgtgag gggcgtattc aagaaattga aggcaaatta ggcaatgctc
     6661 aaattattga cgtcactaaa atggcaaaca acggcaaagt gatttttggg gcaacggtgc
     6721 agttagtgaa tgctgataca gatgaagaag tcacttaccg cattgtgggt gatgatgaag
     6781 ccaatattaa agagggctta atttcagtta attccccgat tgctcgtggt ttaatcggca
     6841 aagaggtgga cgattcagtc agcattacca caccgggtgg caaagttgag tttgacattg
     6901 ttggcgtaga atatatttaa tctacgctag ggcgaattac aatagtgggg cgaaaaaatt
     6961 ttcgccccta ctttattaaa caatctcact cggtacaaag aagtaggcaa tttcacgttt
     7021 tgccgactct tcggaatctg aaccgtgtac cgaattttca cgcatactta aggcatataa
     7081 atcgcgaatg gtgccttttt cacggttatc cggattggtt gcccccatta atgcacgata
     7141 atggctaatt gcattttccc cttccagtac agaaacgaca atagatcctg atgtcataaa
     7201 ttccactaac ggctcaaaga aatctttgcc tttgtgttcc gcataaaatc cttccgcttg
     7261 ctcacgggta agatgtactt tttttagagc tttgatagtc agcccgtttt cttccaattg
     7321 agccaaaatt ttgccgatta aattacggcg tgtagcatcc ggcttaataa tagaaagcgt
     7381 ttgttgaatc atcatcttct cctatttaac ttgcattccc ggctgaacac cgctgtctgc
     7441 atctaataag aacaggttcg caccgcctgt gccggcagat aaaatcattc cctccgacat
     7501 accgaacgac attttgcgtg gagcaaggtt ggcaattaca atcacaaaac gcccgataag
     7561 tgcttccgga tttgggtagg ccgccttaat gcctgagaat acttggcgtt ggtggtcgcc
     7621 taaatccagc tcaaaacgta acattttgtc tgattttggc acagcctcgc agttcaatac
     7681 tttggctgca cgtaaatcta atttcgcgaa atcatcaatc gtaatttcag ggctgattgg
     7741 ctcaactgca atattttctt gtttttcgac cgcttgttgt tccacttttt gtgttccttt
     7801 ggtttggttt tcggttttct tattcgcttc ggcaaataag gctttggttt catcaatcac
     7861 tgcatcaatc tgttttttct caaggcgtga gaatagcgat ttaaacggtg ccacggtatg
     7921 cccgaataat ggggtagcga tattatccca acgcaattcg ctttgtaaga atgcttcggc
     7981 acgttctgcc agttttggta acaccggttt taggtagctc atcagcacac ggaataactc
     8041 aatgcccatt gaacaaaccg cttgtaattc agcctctttg ccttcttctt tggcgatgac
     8101 ccaaggggct ttgtcgtcaa tgtatttatt ggctttatcg gttaattcca taatggcacg
     8161 aatagcttta ttaaattcac ggttttcata gaaattcgct atggtttctg cttgagcggt
     8221 aaattcatta aataacgctt cgtcatctaa tttttcagct aatttgccct caaagcgttt
     8281 agcgataaaa ctggcgttgc gagaagcaag attcactaat ttgtttacga tatcgctgtt
     8341 tacacgttgc acgaagtcgt ctaaattaaa atctaaatct tcaatgcgat cgtttaattt
     8401 tgccgcatag taatagcgta agcattccgg atcgagatgt tttaaatagg tgttggcttg
     8461 aatgaatgta ccacgagatt tcgacatttt cgccccgtcc actgtcacat aaccgtgagc
     8521 aaacacattg gtcggtttgc ggtagccgct gccttccaac attgccggcc aaaacaggct
     8581 gtggaagtaa acaatgtctt taccgatgaa gtgataaagc tcggtggtgg aatctttttg
     8641 ccaaaactca tcaaaatcaa tgcctgcacg gtcgcataaa tttttaaacg atgctatata
     8701 accaataggg gcatctaacc aaacgtagaa gaatttgttt tctgcgtccg gaatttcaaa
     8761 accgaaataa ggggcatcac ggctgatgtc ccattgctgt aaaccacttt caaaccattc
     8821 ttgcatttta ttggcaattt caggttggag tgagccggaa cgagtccact ctttcaacat
     8881 tccctcaaag cttggcaggt caaaaaagaa atgttctgat tcttttacca ccggagttgc
     8941 accggaaact gccgagcgag ggttgattaa atccatcggg ctataggtag aggcacatac
     9001 ttcacagtta tcgccatatt gatcttcggc tttacatttc gggcaggtcc ctttcacaaa
     9061 gcgatccggc aagaacatat ttttttctgg gtcgaacagt tgtgaaatca ctttgctttt
     9121 aataaaaccg ttcgctttta aggttttata aatatcggta gtgatttggc ggttctcttc
     9181 gctgtgggtg gaatggtaat tatcaaagct gatattaaaa ctggcaaaat ccgcttcgtg
     9241 atcggctttg gctttttcga ttaactgctc aggggtaatg cctaatttat cggcattaag
     9301 cataataggc gtgccgtggg catcatcagc acagacaaag tggacttcat tgccacgcat
     9361 acgttgaaaa cgcacccaaa tatctgcttg aatatgttca agcatatgac ctaaatgaat
     9421 tgcaccgtta gcatagggca aggcacaagt aacaagcatt tttcgttttt ggttagccat
     9481 tctttttctc attaaaatta gggtaaaaat tgccgtctat tttagcccaa aagtggcagg
     9541 tttaccagtt ggcgtgaatt tattagagct ttgggctaac aagcggtaga atatgatgcg
     9601 ctagaggcga aacatttttc gcctcaattt cccaaatgat gatgtgggcg aaagatgttt
     9661 cgcctctaaa cctattttgg ataaaaatag tatgcgacaa gtaaagttat accgctacca
     9721 actccccatt caaaccggtg tagtgttacg caagcaacct ttgaaagaaa ggcaaggggt
     9781 gttggtgtgt ttgcaagaac aggagaaagt cggctggggc gaaattgcac cgcttccaag
     9841 ttttagccaa gagagcctag aacaagctga aaaccaagct gtgaattggt taaaggcgtg
     9901 gcagaaagga gagcctgaaa cgttagagca gcttttcccg tctgttgcct ttgggctaag
     9961 ctgtgcgttg gctgaactga ataatgaatt aggcgagcaa gcgaataacc aatcggcggt
    10021 gctgtgctat ggcgatttgg aaaagttaca cacggcattt agccaacata cgaacccaat
    10081 cggtaaaatt aaaatcggtc tcaatcctga acaggaaggc gagcaggcaa atttgctgtt
    10141 gcatactttt ccgaatttac gcctaaggct tgatgccaac cgtctttgga gcttggaaca
    10201 agcggtcaaa tttgctgaaa aaattgcaaa tgaacataaa ccccgtattc aatttatcga
    10261 agaaccttgc caagcgctcg aactttcccg ccaatttgcc acacaaaccg acattgcgat
    10321 tgcgtgggac gaaaccgtga gagaggcgaa ttttttggta aaaaaagagc caaatttgac
    10381 cgctattatc attaaaccta cgctggttgg ttcgcttgaa aaatgcgtga atttaattca
    10441 acaagcacag aagcaaggat tagtagcggt gattagttca agtcttgaga gcagtttggg
    10501 cttaacccaa ctggctcgta tcgcccaaca atacacccca aacagtgtgc cggggttgga
    10561 tacgttaaat ttaatgcaac accaattatt gcgagattgg cacgactcta gcttgccgtt
    10621 ggtcgggcta gaaagcgaat ttgttaggga agttgtggta taatctccca attaaacact
    10681 ctctcccctt gtgggagaga gaccgcttat gagcgttcag cgaaataagc agagagaggg
    10741 gaagcggtca tttttctaaa aaagtttgca catttcccct ctccctgatt tttcttctgg
    10801 acgaagacgt atttcccccc tctccctgat ttttcttcta gacgaagaaa aatctgtccc
    10861 tctcccacga ggggagaggg taaagtaatt tatggtataa aaatagtatg cgtttagaca
    10921 aatttatcgc cgaaaatacc ggtttgaccc gttcacaagc ggctaaagtg ctgaaaagtg
    10981 gtgtggtgac ggtaaacggc aatattgaaa aaagtggtgc ggcaaaaatc agtcaagaag
    11041 atgaaattta ttacgaagat cagaaattag agtgggtgga agaggggcag tattttatgc
    11101 tctataagcc acagggctat atttgttcac acgatgatgg tgagtaccca acggtgtttc
    11161 aattctttga ttatccgtta atgactaaat tgcataccgc agggcggtta gatgtggata
    11221 ccacagggct ggtgctgtta accgatgacg gcaaatggtc gcaccgtatt acctcgccca
    11281 agcaccattg tgaaaagaca tacttagtga cgcttgctga tccggtggaa gatttttatg
    11341 cacagcgatt ggcagaagga attttattgc gtggcgagaa agagccaacc ttgccggctc
    11401 aacttgaaat tttagacgat tacaatgtga atttaactat tagtgagggg cgttatcatc
    11461 aagttaagcg aatgtttgcc gcccttggga ataaagtcga ggcattgcac cgctggcgaa
    11521 ttggcgatgt ggtgttagat gaaaggttgg aagaaggtga attccgctcg ctcacttcag
    11581 aggagatagc cagttttaat ggaaagtaga agaccaagcc tgagcttttt catcatatta
    11641 ggtatgatgg caatgttgcc accattagcc attgatatgt atttgccctc atttttagac
    11701 attgcccgtg acttggcggt ttcgcaagaa aaagtgcaaa ccaccttggc ggtatttacc
    11761 ctaggttttg gggcagggca actattctgg ggaccgatgg cagacagctt tgggcggaaa
    11821 atcattattt taatcggatt agtcggctcg gcgattgccg cttattttct gacccaagtt
    11881 cagaatattg aaacatttta cctgctaagg ttagtacagg gcttatgtgc ggcagccccg
    11941 gcggtggtgc tgggagcatt agtgagagat ctgtttgagc gtaatttatt tgccaaattg
    12001 atgtcggtta ttatgattat ttctatgctt gccccattgc ttgcaccgat tgttggcggt
    12061 tatattgcca aatatttcca ctggcactca attttctatg tgttagtggc gatggggatt
    12121 ttgtgcgtgg tattaattag ttggaaaatc cctgaaacat tagcccccga aaaacgcctg
    12181 ccgttaagtt ttggcaaaac tttaagcaat tttgccatct tactgaaaca taggcctact
    12241 cttggttatg tgctgattgg cggcttaacc tttgcaggta ttttctgttt tttaacctca
    12301 ggctcgattg tctatattgg gctttatggc gtgtcgcaag aaaatttcgg ctatttcttc
    12361 gggctgaata tgattgtgat ggtgacgatg acggcgatta acagcaaaat ggtagtgaaa
    12421 gtcggctctg aaacgatgtt acgaattgct ttagctatgc aactgttagc cggcatttgg
    12481 ctggctttag tggcgatttt tgatttaggc ttctgggcaa tggcaatcgg tattccgctt
    12541 tatatcggaa tgctttccac cattggtagt aatgccagtg ccgccatttt agagcaattt
    12601 ccacaaatgg caggcacggc taacggagta gcaggtacgg ctcgttttgg tgttgcttcc
    12661 cttgttggag cagggctttc acatattgct gtaaccagtg ctgccccaat gcttttggcg
    12721 atggcattgt gcgttatgtt agccggtgtg gtgtattatt ttctgtgtta taagcgataa
    12781 ctaggttggg gttagcttgc gaaaacccaa caaatttcta caagcggtta ataatagtac
    12841 attttttgca aatttttagg cagaattaac cgcttgtgtg gtacgagcgt ggacgctcgc
    12901 accatcgggg caatatctac taagatttta aaaacagcga aatagattcc aaatgcccgg
    12961 tgtgggggaa catatcaatc attgccgctt tttctagcct gtagcctagt tgcaacagtt
    13021 tttcggcatc tcgcaccagt gttgccggat tgcaagagac ataaacaatc cgctcaggat
    13081 tgagtgatgt caagtgatct aggcaaaata gtgctccgtt gcgtgccggg tcgagtagta
    13141 ccttgttaaa cggctctttt gcccaaggtt tgtcagaaaa cggctcatct aaattggttt
    13201 ggtaaaattc cacatttttt agaccgcttg tcaccgcatt ctctcgggct tgttgcacca
    13261 ttggttctac cccttccaca ccgaccaccg atttcgctcg ctcagcaata ggcaaggtaa
    13321 aattccccat tccacagaag agatctaaca ctcgatcttg gttggataat tccagccact
    13381 caagggcttt ttccaccatt ttttcattga gcgtggcatt cacctgaata aaatcccgaa
    13441 ttgaaaaatg caactttaga ccctgaattt gataatacgg gcgttcaccg cacagatgct
    13501 caatgtgatt ttcgctagtc atcacaaaaa gagataattg ctcttgtgtg gcgaattgac
    13561 gcaaattgtg gttatcttgc gccgataatg cccctaaatg gcggaaaaat agggcaatgg
    13621 tattgtccgc actgaccagc tcaatatgcc ccaatttttt cggctgttgc cagttttcaa
    13681 tcaggtgttt taattttggg agcaaattgg caagcggttc aaccagcact tcacagtgtg
    13741 caagcggtat aatttggttg gaattttgca aacgaaagcc gattaccgcc ttgccttgct
    13801 ggatcgcaat gcttaatttt gcccgacggc ggtagtgttt atcgttgccg ataatcatcg
    13861 gctgaacatc aatagcgtgg gtttgcaatt tctgtaagcg ttggaataaa gcctgttgtt
    13921 ttgccttacg ttgcagttca agcgaaatat gctgcatttg gcagccaccg cattgcccgt
    13981 aaagttcgca gcttggcatt cgccgatttg cagatttttt aagaatttta accgcttgtc
    14041 cacgtccgta ttggcgtttc tcttccaaca ctttaaattc cacctgctca tcaggcaggg
    14101 cattttcgat aaaccaagtt ttgccgttga ttttggcaat ccctaagcct tgataatcta
    14161 acgattgaat agttgccttt tgacaagcgg gtgattttat cggttttttt gccgattttt
    14221 cagaataaaa aatagccatt gttttcagat gaattgttat gatataaagt gtcgaaatgg
    14281 ggagattata taagaaaagc agttggcgga aaatggaggc aatatgattt catcggtttg
    14341 gaatgaacgt tatttggcgg ataaaaaacg ggaacaagat caccgctcgc cttttcagcg
    14401 ggatcgggca aggttattgc attcggaggc ttttcgctgt ttgcaggcga aaacgcaaat
    14461 tcacgccgtg ggggaagatg atttttatcg aacccgttta acccattcgt tggaagtggc
    14521 tcaaatcggt agcagtttgc gagaaaaatt attagcggat gtggaaggct ttcaagcggt
    14581 ctgttcggag caggaatttg caaaaaatat ggcaaatctg accgctttat tgccggatca
    14641 tagcttggtg gaatcccttt gttttgccca cgatctcggg caccctccgt tcgggcacgg
    14701 tggtgaaatg gcgttaaatt ataaaatgta cgcctttggc ggcttcgagg gtaatgctca
    14761 atcctttcgg attatgaccc agcttgagcc ttacaccgaa acagccggaa tgaatctgac
    14821 ccgtcgcacc ttactggggg taatgaaata tccggcactc ttgtctcaaa cctcgccgat
    14881 tgagccggca gaaatgagcg aggctcggca tattaatttg caccattttc cacagagcaa
    14941 agggattttt gatgacaaca accacttttt tgagtgggta ttagccccgt taagtgaaaa
    15001 agaccgacgc caattttgca cggttcagcc caatcaagat ccgaaacagc caaacaaaac
    15061 gcaatataaa tctctcgatt gcagcataat ggaactagcg gacgatattg cctatggcgt
    15121 acacgatttg gaagatgcga ttgtaggtgg aatggtcaca ccgcaatcgt ggcaaaatgc
    15181 ggaaaaattg ctggcggagt gccaatccga ttgggtgaaa caacgcctgc cggagattcg
    15241 ggaaaagctc ttttctcagc accgctacga gcgaaaagat gtgatcgggg cattagtgaa
    15301 tcattttatt accaatgtgc gttggaaagc tctgcctgaa tttgacgagc cgttgctacg
    15361 ttataatgcc tatttaccgg aaagtgttgc ctgtgtgctg aaaatcttga aagattttgt
    15421 gtatcaatat gtgatttgtg atgccaaaac ccagcgggtg gaacgcaagg ggcaacgcat
    15481 tctaatggaa ttgttcgata ttttaagcag tgatccgatg cgattactcc ctaataatgt
    15541 gcgggaacgt tggaaaaatg cggaagaatc taagcgtgca agggtaattt gcgactattt
    15601 agccggtatg tctgatgggc aggcgtttaa actttttgaa agtttataat gaactttgtt
    15661 aattttgcaa ggtctcagta ataggtttca tttatttaat aggagatttc aatgaaaact
    15721 gtttctaaag gtcttttagt attagcaact ttggcttctg caacagcatt tgcggtttct
    15781 tccaagtgaa atttatcagc ctcgtggcga attagttaaa gcagatcgtc aaggtaatgg
    15841 tgagtttgaa gtagaatatc gtgtcagtgg taatgatgtt cgtggcttag cgaaaagtgc
    15901 gatcgcccac gctaaacgta aaggtttcca tttagtagaa tctgatattc atagagatga
    15961 tgctgattta aaattcaaac gtggtgacca agagctggat attgaaattg aagtaaaagg
    16021 tagaaatcgg attgaatata aggcagatct agatttagat aaaaactaaa tttacccctt
    16081 aaaacgaccg cttgtgtgat ttaaccgcac aagcggtctt tttattgtgc ttttttgcaa
    16141 aaatactcaa gccgaccggt cccggaattt ggtaaaatag ccgtttaaat gacaataatg
    16201 atgcttttac ttattactta gaggaaaaaa tgtttttagt cggtcagcgt tggctaagtg
    16261 aatcggaaaa taatttaggt ttgggaatcg tgacttcggt ggatcatcgc actgtcacta
    16321 tcaatttccc ggcagcggaa gaagagcggg tctatgcaat tgcagttgca cctttaactc
    16381 gagtgcagtt tcaagccgga gatagaatta acagtataga tggctggcag ttagaggttt
    16441 cagaggttgt ggaaaatcaa ggtgccgtaa tctatttggg caaaagggtg gataacggtg
    16501 aagaagcggt actgcctgaa atgttgctcg atcataaaat cagtttcagc aaaccgcaag
    16561 accgcctttt ttcggctcag attgatcgct cagatcgctt tgcattacgc tttaacgctt
    16621 tgcagcacca gcaagcgcaa tatcagtcgc cactgcgtgg tttgcgaggc attcgagcca
    16681 gcctgattcc acatcaatta catattgcaa aagaagtcgg gcaacgcctt gctcctcgtg
    16741 tgctattagc cgatgaagtg ggactgggta aaactattga agctggtatg attttgcaac
    16801 aacagctatt ttcgggcaga gcagaacgag tattggtatt agtgccggaa agtttgcaac
    16861 accaatggtt ggtggaaatg cttcgccgtt ttaatctgaa attctcgtta ttcgatgaag
    16921 aacgttgtag tgattttgat aaacaagatg aaaatggcga tgatgtaagt gaaaatccat
    16981 ttgagagcga agcgttagtc attacttcac taaactggct ggaaacctca ccgcaacgag
    17041 ccaatcaagt gcttgctgcc gactgggatc tattaattgt tgatgaagct caccatttag
    17101 aatggtcgga aaccgaatct tctatcggct atcagttggt agagcgttta tctcaacaaa
    17161 ttcctgccgt cttgctttta acggcaacac cggagcaatt agggcaagag agccattttg
    17221 cccgcttggc gttgttagat tcggatcgtt tttatgatta tgccgagttt gtacaggagc
    17281 aagcacagta taaaccggtg gcagatgcgg tgagtagctt attaagcgat aaaccgctaa
    17341 gtaatgacga gcagaatgcg attgcggagc tgttaagcga gcaagatacc gagccgatgt
    17401 tccgtgcaat taatagcaaa aaatcggacg aaaatgaccg cttgcaagcc cgtcaagagc
    17461 tgattagtga gctaattgac cgccatggaa ccagccgggt gttgtttaga aatacccgtc
    17521 agggagtgaa aggcttccca catcgggaat accaccaaat cagcctagaa atgccgaaac
    17581 aataccaaaa tgcgttaaaa gtgatgggaa tgatggggag tgtgagccaa agtgatttgc
    17641 tctatcctga atatttgttc caacgaatga acccgaatgc gaaatgggct gaattcgacc
    17701 ctcggattga ttggctcatc actttcttaa aaaatcatcg tgatgaaaaa gtgctggtga
    17761 tctgcaaaca ggcggacact gcgattgctt tggagcaagt tttgcgtgag cgtgaggcga
    17821 ttcgttctgc cgttttccac gagaaaatgt cgattgttga acgtgacaaa gctgccgcct
    17881 attttgctca acaagaagaa ggcgctcagg tgctgattag ttcaagcatc ggttcagaag
    17941 ggcgaaattt ccaatttgct aaagatttag tgctgtttaa tttgccggat aacccggatt
    18001 tattggagca aagtattggg cgattagatc gtatcggaca gaaaaatgac attcagattt
    18061 atgtgccttg ctttaattta tcggctcaac agatgttggc agagtggtat cacaagggct
    18121 tgaatgcgtt tgaagaaacc tgcccgatgg gaacagcgat cttccgtgaa ttaggtgaag
    18181 aattgcaaca attcctgcaa aaacctgaac tttcagccca atttgatgat tttgttgcga
    18241 aaacctataa acgccaacag tatttgaaag ccgaactgga gaaaggacag gacagattat
    18301 tagaactgaa ttctaatggc ggagaagcag ctcaacagct cgctaatgat attgcgaaag
    18361 aagataataa tccgcagttg gttaattttg ccttgagttt gtttgatgtg attggcgttg
    18421 aacaggaaga tttaggcgag cagagcattg tgattagccc aaccggacat atgcttgtgc
    18481 ctgatttccc ggggctatcg gaagatggca cgaccattac ctttaatcgt gaactggcgt
    18541 taatgcggga agaggtggaa tttctcactt gggatcaccc gatgatccgc aatggtattg
    18601 atttaatcac ctccggcgat attggcaaat cagcaatctc attgctggtg aataataaat
    18661 tgcctgccgg tacattatta cttgaggcgc tttatgtggt ggaagcacaa gcaccgaaag
    18721 ggctaaattt aacccgtttc ctaccgccaa ccccgattcg ggttttagtg gataacaaag
    18781 gcaacaatat tgctccgcag gtctcttttg ccgggcttga acgccaatta aaaccggtga
    18841 ataaacagat ggcaaataaa attgccaaaa tggctcgagc ggatattgaa aaattaatta
    18901 aagcgagtga aaaagcggta gaacctcagg tccaacaggt gattgaaact gccaaatttg
    18961 aggcaaatag caaattaaaa gcagaattac accgcttgga atcactcaaa atggtgaata
    19021 aaaatattcg agccgatgaa gttgaagcct tagaacaaca gcttaacgct tcccttgccc
    19081 aacttgaaac ggcaaattat cgcttagata gcttgcgagt gattgtaagt aataaagcgt
    19141 aattttttgc aagtacgaaa agtgattttt tcgatctgtg tcgaaaaaat cacttttcta
    19201 ttttgtgtca tccttgcaga ttatttatgc tattcctcat attgtaaaag gtataaaaaa
    19261 ggaatattat gtatatagat ttgcaatatg ctgtgccgtt attgtttgaa tacgacccga
    19321 acaaaagcca aattaattta gccaaatatg gtattgattt tgaacaggca aagttgcttt
    19381 gggaagatga acgaaaagtt gtactggagg cttgcattga acccgaatta cgctatttcc
    19441 tgattggcaa gatttatgat aaatattgga cagcgttttt tacaccaaga aatgatgtta
    19501 ttcgtttaat ttcagttaga cgttcccgta aaaaagagat ctcatactat gagaaatacc
    19561 attagtgccg aagaattaga acgtatcttc gatgaaggca aagaagatat tttacaatac
    19621 tgcgatcttt ctaccgctca tcgcccgggg caaatgaaaa gggtgaatgt tgatttccca
    19681 aattggatgg tagaagcgtt agataagcaa gccagacatt taggtgtgcc tcgccaagcc
    19741 ttgattaaaa tgtggattgc ggaaaaatta ccggttcaat cacctaggta agcgagtggc
    19801 aaatggcatt aattgaatat aaccctccat tagaaccatt tttagatgag gtttatcggg
    19861 ataaccatat tttagtaatt aataagccta gtggtttatt atcggtgccg ggcaatcgtc
    19921 ccgaatatta cgacagtgca atgactcgag tacagcaaaa atatggcttt accgaaccgg
    19981 ctcatcgttt ggatatggca acaagcggta ttcttttgtt cgccctaagc aaagcggcgg
    20041 aaaaagaact aaaacgccaa tttcgggaac gtgaaccgaa aaaacactat attgcgttac
    20101 tttggggcaa attaggtgaa aaagttgggg ataagggcga aatgaatttt ccgctgattt
    20161 gcgattggga aaatcgcccc cgccagaaaa tttgctatga acgaggcaaa aaagccatta
    20221 cccattatga agtgttagct cattatccga ataatatagc gagagtaaaa ctcacgccta
    20281 tcacggggcg ttcgcatcag ctacgagtac atagccttgc gttaggtcac ccgattattg
    20341 gcgataagtt ttatgctaat ccgctggcaa aaagtttatc gccccgttta tgtttgcacg
    20401 cggagtcact aacaattact cacccgatta caagggagtt gatgacgttt actgctgagc
    20461 cgacttttta gcctcgttca gtaggtgttt gtaatatgcc caatcaaaat attgccccgg
    20521 gtcgattttc cgttccgggg caatatggca atgcccggtg atgcgttcat cggtaatttg
    20581 tggatagctt tgctgaatgg ctttggtcaa atttgccaaa gattggtatt gagcttgagt
    20641 aaacggctga ttattactgc cttccagttc aatgccaatc gaatattcat tgcatttctc
    20701 ccgcccttca aaacaagaga cgccggcgtg ccacgccata tcgttaaaat tcacatattg
    20761 cgtgatttcc ccctccctat taatcaaaca atgggcggaa acccgtagat ctttgatttc
    20821 ttcaaaataa gggtgagcgg ttggttcgag tttaccttgg aaaaacagat cgataaaatt
    20881 tccaccaaat tcttccggcg gtaagctgat gtagtgaata accaacaagg aaatatcctc
    20941 ttgatcagga cgttggctaa aatgcggaga cggcacttgt ttttgaccgg ttaaacagcc
    21001 ctgttcgatt tttaaatttg gcatagtcta aatagggtga atacgttaaa atatggctca
    21061 ttttactaga aaaagagaag aatatgttaa gttatcgcca cagtttccac gcaggcaacc
    21121 acgctgatgt gctaaaacac attgtccagc ttttgatctt gcgagcatta aaagaaaaag
    21181 aaaaaggttt tttatatctt gatactcact ccggtgtggg gcgttatagt ctgttaagtt
    21241 ttgaatcgga aaaaacaggc gaatatttag agggcgttgc ccgtttatgg gagcgtgatg
    21301 atttaccgga agaagtggca ttctatattg atgagctgaa aaaattaaac cgtggcggca
    21361 agttaaagta ttacgcaggc tccccattat tggcggtaca gcaactgcgt gagcaagacc
    21421 gagccattct taccgaactt caccccaatg attttccgct gttacgacaa gaatttgcca
    21481 aagcgaaaaa tgtgcaaacc aagcgagaaa atggctttca acaattaaaa tccgccctgc
    21541 cgcctaaaga gcgtcgaggt tttgtgttga ttgatccacc ttatgaatta aaagaagatt
    21601 atgaattggt ggttaaagcg atagaagagg gctacaaacg gtttgccact ggtgtgtatg
    21661 ccatttggta tccggtggtg cttcgccaac ataccaaacg tatagtgcga ggtttaatgg
    21721 ataccggcat tcgcaaaatt ctacaaattg agcttgccgt tcgtcctgat agcgaccaac
    21781 gtggaatgac ggcaagtggt atgattgtga tcaacccacc gtggcagctt gaaacccaga
    21841 tgaaaaaaat cctgccatat ttaaccgagg tgcttgtgcc ggaaggaaca ggttcttgga
    21901 aggtggagtg gattacgcct gagtaaatta aatacggata gcacaagcgt ggacgcttgc
    21961 gccatcataa attctgattt gcaatatttt ttagaaaaat aaccgcttgt cttatcaaga
    22021 agtgggggaa atataaaagg aaaaaacgat gcaacaatac aaacacgact ttattgaatt
    22081 tgccttaagc cgcaatgtgc tgaaatttgg cgaatttacc ttaaaatcag gcagaatcag
    22141 cccctatttt ttcaatgctg ggctttttaa caccgggcgc gatttagcca aattaggcga
    22201 atattacgcc aaagccattc aagccagcgg cattgagtat gatgtgttat tcgggccggc
    22261 ttataaaggc attccgattg caaccacggt tgccgtggca ctagccaacc tgttcgatgt
    22321 ggataaacct tgttgcttta accgcaaaga ggcaaaagat cacggtgaag gcggtaattt
    22381 aatcggttct cccttaacgg gcaagatttt gctggtggac gatgtgatta ccgcaggcac
    22441 ggcaattcgt gagtcgatgg aaattatcaa tgccaataat gcccagcttg ccggtgtgct
    22501 gattgcgtta aaccgtaaag agaaaggcaa gggcgagttg tctgcgattc aagaagtcga
    22561 acgtgattac ggttgccaag ttttctcgat tgtggatttt gatgatttgg tagcatttat
    22621 tgaaacgtcg ccacaatacg ctccttattt gccgaaaatg cgtgaatatc gtgaaaaata
    22681 cggtgtttaa cttttgcaaa aaaacagcaa aaactcaccg cttgtcactc tctaatctca
    22741 ccattatgaa tcactttcat cttttggtga gattttttca attaaaaagc cgataaattg
    22801 attgtgagct ttagctaatt ggcttaggat aaactcctgt aatacaggag ttggagaact
    22861 aaaatggcac atcaaaaatt accttttcac gcagacaccg ttggctcata tttgcgttcc
    22921 gatgcttgga aaaaagctca cgcagactat aaagcaggca acatttccct cgaacaacgt
    22981 gatgaaattg tagaagcgga agtgaaaaaa ttagtacaag catcaattag atgcgggcat
    23041 tcaagttgtt acagacggcg aatatcaccg ctcttggtgg catattgatt tcttggaaaa
    23101 tctgaacggc attgaaggct atgtgccgga aaaagcctat gcgtttaaag gggttgaggt
    23161 tcgcccttat aatacacgtt gttgcggtaa agtgtcttgg aatccgaatc acccttttat
    23221 tgagcatttc aaaaaattca atgcgattgt aggtggtcgt gcggtggcga aatttaccat
    23281 tccaagtcca aaccaattaa tgtacccgat tcagtgggat cacggcattt acccaaaccg
    23341 tgaggaattt gccaaagatg tgcaacaggc ttataaagag gcgattaaag cgttctatga
    23401 tgccggctgt cgttatttgc aaattgatga tgtctattgg gggtcgttgt gtaataacgt
    23461 tggtcaaccg acatttgaag ccgataaagc tcaagcggtg gcgaatattc aagccattct
    23521 tgccgataag ccggaagatt taaccattac cacccacgtt tgccgaggca actataaatc
    23581 ttcttattta ttgacagggg cttatgatcc gattgccgac ggcttatttg ctcaaaccaa
    23641 ctatgatggg tatttcttag aatatgatga cgagcgttca ggcggttttg agccgttaaa
    23701 acattttgcc aacaacaaag ggcgtgtggt attgggctta attagttcaa aattccctga
    23761 attggaagat aaggaagcgg ttaaagcccg tattcaagaa gcggcaaaat atgtgccgtt
    23821 agagcagctt tgcctaagcc cgcaatgtgg ttttgcctca accgaagagg gcaatattat
    23881 gtcggaagca cagcaatggg cgaaagttcg tcttgtggag gaaatcgccc aagaagtttg
    23941 gggcgaagat taattagagt gaaaaatgcc cgtaacaagc gggcattttt tgtgaatttt
    24001 ttgcaaattc aagccattta gcgaatgcgg ttaaaacctt gttctaaatc ggcaatcaaa
    24061 tcttccaccg cttccaagcc aacgtgaatg cgaattaatg ttcccgtcag tttgcgttca
    24121 atcgccgggc ggattttggc aatttcttcc ggctgattgg caagaatcag cgattcaaac
    24181 ccaccccaag aatacgccat tgaaaacagt tcaaaatgct ctaggaagtt ggctaatttg
    24241 tcattcgaga gcttttcgca aagttcaaat gaaaatagac cgcttgaacc taaaaaatcc
    24301 cgcttaaaaa attcgtgccc cgggcagctt tccaacgccg ggtgataaac tgctttcact
    24361 tcagggcgtt gagccagcca gttagctacc gcaatgctac tttgttcgtg ctgttttaag
    24421 cgaatgccta aggtgcgtag cccccgagcg gtgatgtaag cggaatcagc atccaccatt
    24481 tgccccatta aataagagcc ttcacgcagt ttatcccaac aacgggcgtt agaaaccgca
    24541 gtaccgatca tcacatcaga atgcccgact aaatatttag tgccggcttg aatggaaata
    24601 tcaatgccat attctaaagc agggaacagc acaccggcag accaagtgtt gtcgatcata
    24661 atcacgattt ctgggttgat ttcacgagca acacgcacga gagtcggaat atcaggcact
    24721 tccattgtta gcgagctcgg cgattctaaa aaaagcactt tggtgttcgg ttgcacaagg
    24781 gctttcaagc cttcaccaat catcgggtca taataagtag ttgaaacacc catacgtttt
    24841 aacagcgcat tacagaattc ttgtgtcggt tcgtaagctg cgcctgtcat taaaacgtgg
    24901 ttgccttgtt ccacaaaagc taaaatcgca ttggtgactg ccgccgcacc gcaagggtaa
    24961 aggtagcaac ctgctccacc ttctaattca cacatcgctt cttgtaatga aaaatgagtg
    25021 agagtgccac gtctgccata aaataatgct cctttgtagc ggttttgtgt agcgtgtttt
    25081 ttctcttcta aggtttcaaa cactaaagat gaagcacgct gaatcaccgg gttaactgct
    25141 ccttgtgtgt tacgtttttt acgccctgta tgaacaagtt tggtggaaag atttttatag
    25201 ttagacataa cttttcctaa agtaaaatgc ataggggcaa atcaacattt gcccctttat
    25261 taataattaa cgaaacataa agttatttct ttgacggcta cgtttaaatt ggctgattag
    25321 cacaatgacc gcaacaatta agtaaaccgc aaaagtaaag attagccatt gtgccattga
    25381 aaagccgaac atttcccatt ggctttggct acaattaacc ggaccggggg caaacacttg
    25441 tggtagccat tggtcaagcg gcaaggtttg cgggaaatta actttaaatt cgcattgatt
    25501 ccatggtgat ggattgacct gataatcgtg gtgtttgatt gaaagtacta gccctttaaa
    25561 tgcgctacca agccaaatta gaattgccaa gtagcgaata atcgcatatc tattaccaag
    25621 aaatcctaaa ataccggcaa ataaaatacc aaataaagca actcgctcat aaatacacat
    25681 tacacaaggt actaatccca tcccatgttg gaaataaagc gctgtgcctt caagtataag
    25741 acagcttaac attagtaaaa accatgcact gcgagattgt gatagatttt taaaaaaata
    25801 gagcatagtt attcctcatt ttgtgaactt aaggcattct accttatttg gtatgagtta
    25861 tctataaact aacgtgtaat aaaccatccc caatttatca ttacttcagt catagaaggt
    25921 agtaagaatt ctaaccctaa gaaaccgaca atagatagaa caatggtata aggtaatgcc
    25981 atatagacca ttctgccgta agacagttta attaacggcg caaaggagga cgttaataag
    26041 aataagaaag cagcttgtcc gtttggggta gcaacagaag gaagatttgt gccagtatta
    26101 attgcaactg caatcaggtc gaactgctca cgatctataa tgccggcatc tagtgcggtt
    26161 ttagcttcat taatgtaaac agtaccgacg aagacgttat ctgaaatcat cgagagcaaa
    26221 ccattgaaaa tatagaataa tgaaagctgt gaatgtggtt cggcagataa cacaaaggca
    26281 atgatcggct caaataattt taaatcaata atcacggcaa caaccgagaa aaacacaata
    26341 agcaatgcag taaaaggcat agattcttgg aatgctttcc ctaaagtgtg ttcatcagta
    26401 atgccacaaa atgcagtgca aataatgatg atggttaagc caataatccc tacatcggca
    26461 agatgtagcg ctaagccaat aattaaccaa attccagcaa tggcttgcac cagcatcttt
    26521 aagcgatctt gtttcgtcat tttttgttct tttagttggc tatagcgagc gagtacgccc
    26581 caaactttgc taggaagccg gtctccataa ccaaataatt tatatttttc tacaagaaag
    26641 caggtcgcaa tcccacaaat taacacgggt aagctaactg gtaatgctct aagtaagaat
    26701 tcgataaatc cccattccgc ttgggaggca ataattaagt tttgtggttc tcccaccatg
    26761 gtcattacgc cacctaaagc tgagccaata ccggcgtgca tcaataaact tcttaaaaaa
    26821 ccacgaaatt gctctaaaat ttctttatta gagatgattt tttcatcatt ggtaatatca
    26881 gtagaatctt caaagttatt acctgatgcg actttatgat atacgccgta gaaacctgtt
    26941 ccaacgctaa tgattacagc aataaccgtt aaagcatcaa gaaaggcgga taaaaaagca
    27001 gcgcttaagc agaaagaaag ggaaagaatt tttttcgaat gaatggcgac aagcagtttg
    27061 gtgaaaatat aaagcaataa ttgcttcata aagtaaatac cggcaaccat aaacattaaa
    27121 agaagaataa catcaaagtt tgccataatt tcttctttaa tgtggtgagg atttgtcata
    27181 ccgattacaa ctgcttcaat cgctaataaa ccacctggct gtaatggata acattttaat
    27241 gccatagaga gagtaaaaat aaattcagcg actagaaacc agcctgcaac aaaaggattg
    27301 ataaagaaat aaatgagagg attgataatt aaaaatgcca aaatgcacaa tttataccac
    27361 tcggggcttt ttcctaagaa acttttgaac agagcatcaa tgctactcat ataaaggacc
    27421 tcaa
//
LOCUS       DANLXO010000021        27358 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.021, whole genome shotgun sequence.
ACCESSION   DANLXO010000021 DANLXO010000000
VERSION     DANLXO010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 27358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27358
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.021"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(196..378)
                     /locus_tag="PXD69_000769"
     CDS             complement(196..378)
                     /locus_tag="PXD69_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6282989.1"
                     /translation="MYQFGYLRTKIGTDTQRAMLWNCPTYVLIIPFLLNTSVKKQYHA
                     FWQKYHQHNNDVSFPY"
     gene            528..1568
                     /gene="selD"
                     /locus_tag="PXD69_000770"
     CDS             528..1568
                     /gene="selD"
                     /locus_tag="PXD69_000770"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020909986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:573..575,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDL6282990.1"
                     /translation="MSEPIKLTQFSHGAGUGCKISPKVLGTILQTQLEQFVDPNLLVG
                     NETADDAAVYDLGNGQAIISTTDFFMPIVDAPFDFGRIAAANAISDIYAMGGKPIMAI
                     AILGFPVNKLPAEVAQQIVEGGRFACQQAGIALAGGHSIDSPDPIFGLAVTGIVPTER
                     VKRNASAVAGCELFLTKPLGIGILTTAEKKGLLKPEHQHLASEVMCQINLIGSAFSEL
                     PEVTAMTDVTGFGLLGHLSEVCQGSGLRAEVDFEDIQVLDGTKEYIALGAVPGGTNRN
                     FDSYGHLISAMTDEQKAILCDPQTSGGLLVAVLPQAVEKVQQIANRANVPLFHVGRLL
                     EMEQGKPRIEVI"
     gene            1568..2041
                     /locus_tag="PXD69_000771"
     CDS             1568..2041
                     /locus_tag="PXD69_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDL6282991.1"
                     /translation="MFKPNVTMACVVHCKGKFLFVEEIEYGKRTLNQPAGHLEKDETL
                     LEGASRELFEETGIRAEMANLVKIYQWQAPRSQTDFLRFLFSVELEEWLEPNPQDADI
                     TQALWLTLAEFEDYIQQQGQCARSPLVVQSVKDYLSGERYPLSLLNAFEWARNGK"
     gene            2031..3239
                     /gene="ubiH"
                     /locus_tag="PXD69_000772"
                     /gene_synonym="visB"
     CDS             2031..3239
                     /gene="ubiH"
                     /locus_tag="PXD69_000772"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HDL6282992.1"
                     /translation="MENKTTTQFDVVIVGGAVTGSVLALALSSFTHHKISIAIVEKSL
                     PDYEQQGGFDARSIALAEGSLQKMGQIRPLAGSSLGEMISEIGTPIQQIQVADKGHFG
                     KTTLKASEQNVAQLGMVVELAKFGRKLTACLAQQANITLFCPNQVVGIERSQQHCGLS
                     LKNGEKLSCSLLVAADGIQSQIAKQCGVETVKVRDYAQSAIIANVELSESHQNQAFEY
                     FTPQGPFALLPLSGNMMSLVWCVKEPNELIQLSDSEFLARLQQQFGWKLGQFVRVSKR
                     FVYPLILQKAQSHIHHRLAVVGNAAQMLHPVAGQGFNLGLRDLTTLAELVALAFNQGK
                     DIGEFSLLSTFENERTQDQARMINATSGLISLFCCEMLPVQVVRNLGLLTVSHSKIAR
                     DFVANQALGW"
     gene            3502..4734
                     /locus_tag="PXD69_000773"
     CDS             3502..4734
                     /locus_tag="PXD69_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HDL6282993.1"
                     /translation="MTTENMSTPKQAFIGLQMLFVAFGALVLVPLITGLDPNVALLTA
                     GVGTLIFQICTKRQVPVFLASSFAFIAPIQFGVQQWGIPVTMGALLCSGFIYMALSAL
                     VKAKGVNILHKYFPPIVIGPVIMVIGLGLAPVAVDMATGKSANIAYNTAIIVSMITLV
                     TTLIVAVFAKGLLKLVPILAGLTVGYILSVFMGLVDFTKVVEAPWFSLPKVSAPEFKL
                     DAILYLLPIALAPAVEHLGDVMAISQVAGKDFMKKPGLHRTLLGDGLATSAAAALGGP
                     PNTTYSEVTGAVMLTKNFNPKIMTWAACWAIAFSFCGKIGAFLATIPTFVMGGIMMLL
                     FGAVAVVGINTLIKAKVDLSIPRNLCIASVVMTFGIGGMLINIGEFSLKGISLCALVA
                     IVLNIVLPKEKVEDSAAH"
     gene            4801..5787
                     /locus_tag="PXD69_000774"
     CDS             4801..5787
                     /locus_tag="PXD69_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL6282994.1"
                     /translation="MQKLTFSPPLLNTPCPWCSELESLRELYACEYTGAVTTRTSMPQ
                     PYPHDWAKNQYVLFDSNAQKTASVNTQDATSLQTASLNTIGLSPNNLDTTISFVRTIS
                     NELTAPSSKPFIISVFGSPEEVGECYEKIVAFQTEVKMPLAMEINISCPNIPGEISPA
                     YSAEELSHYLHALQTSLKKLAQGDNTLPIGIKIPPFTYQNQYDELIKGLLQAVENGEN
                     LPISFITSTNTLGSSLVLNAGKAVLNSEVGTGVGGMAGTAIHALSLGNVYTIRQMLDQ
                     EPKLKHLQIIGVGGVNDKAGFERMKSVGADFVGLATALGVKGIGVFKEILSE"
     gene            complement(5828..6238)
                     /locus_tag="PXD69_000775"
     CDS             complement(5828..6238)
                     /locus_tag="PXD69_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HDL6282995.1"
                     /translation="MLYSVLTAHILLNEPYRNGAHSTQHEHLVVMFEIDEESGYFYAM
                     DLHQTEQPVVDSLFVFRVSDIEQNSLKEPRRLEICWSEDGYQAFLLINGYPHAVFDFR
                     QFVGYNHTKFPMPELGSMWVHKETTNELVEKWLG"
     gene            complement(6304..7614)
                     /gene="eno"
                     /locus_tag="PXD69_000776"
     CDS             complement(6304..7614)
                     /gene="eno"
                     /locus_tag="PXD69_000776"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDL6282996.1"
                     /translation="MAKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTG
                     SREALELRDGDKGRFLGKGVLKAVSAVNNEIANALVGKDGSAQAEIDQIMIDLDGTEN
                     KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHA
                     DNNVDIQEFMIQPVGASTLKEALRIGAEVFHNLAKVLKAKGLNTAVGDEGGFAPNLAS
                     NADALACIKEAVEKAGYVLGKDVTLAMDCASSEFYDKERNVYDMKGEGKTFTSQEFTH
                     YLEGLCKEYPIVSIEDGQDESDWEGFAYQTKVLGDKVQLVGDDLFVTNTKILKNGIEK
                     GIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQ
                     IKTGSMSRSDRVAKYNQLIRIEEALERAGTPAPFNGRKEIKGQA"
     gene            complement(7805..8983)
                     /gene="rlmC"
                     /locus_tag="PXD69_000777"
     CDS             complement(7805..8983)
                     /gene="rlmC"
                     /locus_tag="PXD69_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HDL6282997.1"
                     /translation="MSSLLHCSHFERGDCTSCQWIEKPYSTQLAAKEADLKRLILPFI
                     LQNKTEILPLVGSPISQFRNKAKMVVSGSVERPILGILKDQNDAQSGVDLTDCLLYPS
                     SFHRLFPILKDFIARAGLVPYNISKKKGELKYILITESQYNQSFMLRFVVRSEAKRAL
                     VERELPELLEKLPPNSVVSLNIQPQHAALLEGETEIFLTEQKVLEEHFNGIPLFIRPQ
                     GFFQTNPVVASQLYHTAQSWIEHLPIAKLWDLFCGVGGFGLHCANALQAKNSNVELTG
                     IEISASAIASATKSAEKLGLKQVKFASLDSAQFALNEAGSPPDLVIVNPPRRGIGKLL
                     AEFLNQLGSPYLIYSSCNAVSMANDFTFLTNYELHKVQLFDMFAHTAHYETLTFLVKK
                     "
     gene            complement(8976..10013)
                     /gene="nagZ"
                     /locus_tag="PXD69_000778"
     CDS             complement(8976..10013)
                     /gene="nagZ"
                     /locus_tag="PXD69_000778"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HDL6282998.1"
                     /translation="MLLIDIKDKELTQEEVEMLEHPLVSGLILFTRNFYDKAQIQALV
                     KSIRQRVKKPLLITVDQEGGRVQRFREGFTKLPAMQSFNQLATTPEQAMQLAKETGWL
                     MAAEMFALDIDLSFAPVLDLGHECKAIGDRSFGQEPAAILPVAEAFIDGMREIGMATT
                     GKHFPGHGHVLADSHLETPFDDRPKERIFNHDILPFKQLIAKGKLSAIMPAHVVYTQC
                     DSQPASGSSYWLKEVLRKQLNFNGVIFSDDLGMKGAGFMGNFVERSEKAIQAGCDLLL
                     LCNEPEGLVQVLDGLKYQPTQAQKERRLSLMKRKTVTWRELENSSRYQQTQAELTALQ
                     NNWLEWKEANV"
     gene            complement(10139..10870)
                     /locus_tag="PXD69_000779"
     CDS             complement(10139..10870)
                     /locus_tag="PXD69_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDL6282999.1"
                     /translation="MFDWITNPEAWVALFTLTGLEIVLGIDNIIVISILVSRLPIEQR
                     QSARIIGLGLAMGTRILLLLSLAWMMRLVEPLFTIGNNPISGRDLILLIGGLFLIVKS
                     AMELKESISAESHEEKSESIKKASFFMVLIQIAIFDIIFSLDSVITAVAMADDIPVMV
                     IAIIIAVAVMMLAAKTIGDFVDNNPTIKNLALAFLILIGIVLVGEGFDIHIPKAAVYT
                     AMGFSVVVEMLNIKMRRNQAKLEQA"
     gene            complement(10959..11639)
                     /gene="mutH"
                     /locus_tag="PXD69_000780"
     CDS             complement(10959..11639)
                     /gene="mutH"
                     /locus_tag="PXD69_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HDL6283000.1"
                     /translation="MQLSTFSPTEQALLSKAEWLAGFTLGEIAEMLHIPIPADLKRDK
                     GWVGTLIETALGAKAGSKAEQDFAHLGIELKTIPVNQKGLPLETTFVSLAPLTQNNGI
                     IWETSHVKHKLSRVLWIPVEGERKIPLAERHIGQPILWSPTITQESRLQQDWEELMEL
                     IVLGELHKINATLGEVLQLRPKGRNNRSITSAINAKGEIVQSLPLGFYLRKHFTAEIL
                     QNFLHCPL"
     gene            complement(11731..12366)
                     /gene="lexA"
                     /locus_tag="PXD69_000781"
     CDS             complement(11731..12366)
                     /gene="lexA"
                     /locus_tag="PXD69_000781"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HDL6283001.1"
                     /translation="MRKHLTARQQEIFDFVKNHIETTGMPPTRVEIAREIGFKSPNAA
                     EEHLKALARKGYIEMLSGTSRGIRILVEDENQAANDEDEGLPLIGKVAAGTPILAVEH
                     VENHYPVNGAMFNPSADYLLKVNGNSMEKIGILDGDLLAVHKTNTARNGQVVVARVND
                     EVTVKRLEKKGELIYLHPENDELKPIVVNPAQEYIEIEGIAVGVIRSNAWM"
     gene            12533..14968
                     /gene="plsB"
                     /locus_tag="PXD69_000782"
     CDS             12533..14968
                     /gene="plsB"
                     /locus_tag="PXD69_000782"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HDL6283002.1"
                     /translation="MSGLLNFYRAFLNLPLSLLVKSRSIPTHPVAELELNLEQPIVYV
                     LPYTSQTDLLILQKNCLALNLPDPLQENVIEGQTLLRFVFLDEGRRFFKSKGAKSETE
                     SIFYRYLDLHRANAELDVQLVPVSVLWGRAPGKEDARHLQVLTSFQRFLSMVWFGRDN
                     FVRFSPAVSLRYMVTEYGADEKIAQKIARVAKMHFAKLRYSAMGPRLPNRDAMFNKIL
                     NSEVIQAAIAEEAKKSSPEKARKEAEKIINEIAADVKHESLRVADRVLSWLWNKLYQG
                     INVQNADRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFWP
                     AGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEP
                     KTGMMSMSLQALQRGLNRSLSIVPVYIGYEHVLEVDTYAKELRGAAKEKENAGLVLRV
                     LKKLKNLGQGYVNFGEPILVNNYLNQYFPEWKEPSEDGRPKWLNEAVDNISHQVMVNI
                     NKAAAVNAKNLVGSALLASRQRALTREQLIEQLGSYIQLFRNVPYSKDMTLPTESAEV
                     MLNHVIHLPRSGVLIEKDNFGELVRLERESAVLMTYYRNNVQHLFVLPSLVASMVLHH
                     EAVSKDVVIKSVNRIYPFLQAELFLHFKQEELKAHIEAIIAELSRQGVIKNESDMLMI
                     NRSHIRTLQLHSAGVREILQRYYISLSVLLEQPNISRGYLEKESSSIAQRLSVLHGIN
                     APEFFDKAIFSTFTSSLKAQGYFDGDDNLAIAKVKETESLLRSLISIEVQQTIQGAMA
                     KVAESVENPNIAG"
     gene            complement(15073..15636)
                     /locus_tag="PXD69_000783"
     CDS             complement(15073..15636)
                     /locus_tag="PXD69_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HDL6283003.1"
                     /translation="MSAPNSGTNPAPLGLCGFALTTFLLSLINNGTFSGENVGLVLAM
                     GFAFGGTSQMIAGMFEFAKGNTFGFTAFTSYGAFWWSFALFKVFFAANVSAEFVGWYL
                     VAWGTFTLMMFIGTLAKARALQAIFLSLTITFYLLAAGDFTHNTTLTNIGGNFGLLTA
                     FLAFYLAAADIINESFGKTVLPIGEPK"
     gene            complement(15834..16730)
                     /locus_tag="PXD69_000784"
     CDS             complement(15834..16730)
                     /locus_tag="PXD69_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6283004.1"
                     /translation="MDILDRLLAFAQISAGISVKCQLQGDWQLENPHQTGQAIAHIIS
                     YGQAYLQHNGKTHHLKQGDIVFFPRFADHTLRSQIQPLTSKNAVNPEQLGAFTLTQAG
                     LSQSECDMFCLHFYYDHQAELMESLPEMIVFQVAETPLKAMLDILKQEAETPNLAVKS
                     VVNSLAVVILTMILREHLVNHNNQLFGILKGWQDLHLRPLIKAILLNPEHEWQVDDMA
                     AFIHLSRAQLVRLFNKHLCISPHAFVHKIRLQKAAMLLKSQAGSVLSIALSCGFQSES
                     HFITAFKKQYCVTPSQYRQLNP"
     gene            16866..17207
                     /locus_tag="PXD69_000785"
     CDS             16866..17207
                     /locus_tag="PXD69_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL6283005.1"
                     /translation="MSSFQNWTEHTAHVKQSFGKLGQKHPKMLEAYKALGTAAAAEAL
                     DHKTRELIALAVAITTRCESCISVHAEEAAKAGATESEIAGALATAIALNAGAAYTYA
                     LRALEAVEEQK"
     gene            17218..17571
                     /locus_tag="PXD69_000786"
     CDS             17218..17571
                     /locus_tag="PXD69_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL6283006.1"
                     /translation="MKKLAWILGFAAMMPMMSSAKQASVQQVQAEKAAGIWIDVRSAE
                     EFQQGHLNGAINVTHTEIAQRIAEVAPDKNQPIHLYCRSGHRAEAALNELKKLGYSNV
                     TNHGGYDDLIKAGLK"
     gene            17631..18269
                     /locus_tag="PXD69_000787"
     CDS             17631..18269
                     /locus_tag="PXD69_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgB family protein"
                     /protein_id="HDL6283007.1"
                     /translation="MSAFNNFVNFVANIVAPMQRQFINFVRIAICIVMVWIGGLKVCQ
                     YEADGIAHFVSNSPFFSYMYKKGPNLVDDGTGKMVMEYTLHKNPEGKMVAKNIEWHKE
                     NGTYTASYIIGATIVTVGLLTLSGIWFPVSGMAGGLLTFGMSIVTLSFMITTPEIWVP
                     NLGGDMPTPAHGFPYLSAVGRLIVKDVIMMAGGLVAAAECANRILARRKAIA"
     gene            18404..19585
                     /gene="purT"
                     /locus_tag="PXD69_000788"
     CDS             18404..19585
                     /gene="purT"
                     /locus_tag="PXD69_000788"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HDL6283008.1"
                     /translation="MTTIGTPLRTNATKVMMLGSGELGKEVVIELQRLGVEVIAVDRY
                     DNAPAQQVAHRAYTISMLDGNALRDLVEKEKPDFIVPEVEAIATATLVELEQEGYNVI
                     PTAKATQLTMNREGIRRLAAEELGLKTSPYRFVDNFEQFQQAIQEIGIPCVVKPIMSS
                     SGHGQSVIKSEADIQQAWDYSQQGGRAGGGRVIVEGFIKFDYEITQLTVRHIHGTSFL
                     APIGHIQVDGDYRESWQPQQMSDIALKKAQETAEKITSALGGRGIFGVELFVCGDEII
                     FNEVSPRPHDTGIVTMASQELSQFALHARAILGLPIPEIYRISPAASKAIVVEGKSDN
                     VRFGGVDKVLAEIGTNIRLFGKGEVNGHRRLGVILARDENTVRALEKARRAYDKLDIQ
                     L"
     gene            complement(19677..21170)
                     /locus_tag="PXD69_000789"
     CDS             complement(19677..21170)
                     /locus_tag="PXD69_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005556599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL6283009.1"
                     /translation="MFKQLQQVGKAFMLPIAILPAAGLLLGIGGALSNKATVQAYPIL
                     DNPTLQGIFQIMASAGSVVFGNLALLLCIGLGIGLAKRDKGVAALAAVVGYLIMTGTI
                     SALIPLFPPETKGIDTGVIGSLVMGLITVKLHNKYHNIQLPQILGFFGGSRFVPIVTA
                     FAAIFVGAVFFLIWPAFQQWLVSAGQGIAEMGEIGTFFYGFLMRLSGAVGLHHMIYPL
                     FWYTELGGTEVVNGETIIGAQKIFFAQLADPTHQGLFTEGTRFFAGRFDTMMFGLPAA
                     CLAMYHAVPKARRGAISGLFLGAALTSFITGITEPIEFMFLFVAPWLYVFHAFLDGVS
                     FYIADLLNISIGNTFSGGVIDFTLFGILQGNENTNWLRVIIVGLPWAALYYFSFLFLI
                     KKFNVMTPGRAEESEEVVEQQTSSLTENAHKIIAALGSANNIENVDACITRLRVAVKE
                     VKAVDKATLKKLGAIDVLEVGGGVQAVFGAKAVLYKSEVNQILGKED"
     gene            21371..23218
                     /gene="ilvD"
                     /locus_tag="PXD69_000790"
     CDS             21371..23218
                     /gene="ilvD"
                     /locus_tag="PXD69_000790"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012055207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDL6283010.1"
                     /translation="MPILRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFT
                     QFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI
                     RLDLVDAMIESADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGN
                     GSMLATHADRKELFLRAGREIVELCRKYYQQDDESVLPRSIATFDAFENAMSLDIAMG
                     GSSNTVLHLLATAQEAGVDFKMEDIDRLSRVVPCLSKIAPNTNKYHMEDVHRAGGIMG
                     LLGELDRAGLIHRHVKTVLGLTIEEQLNQYDIIRNKDEDLHKFFRAGPAGIRTTKAFS
                     QDCRWDTVDDDRVNGCIRNVENAVTKEGGLAVLFGNIAEDGCIVKTAGVDESIWKFTG
                     TAIVFESQEDAVAGILGGKVKEGHIVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKKC
                     ALLTDGRFSGGTSGLSIGHASPEAASGGAIALINDGDTVAIDIPNRSINLMVSDEELA
                     ARRAEMEARGDKAWQPLKREREVSFALKVFGHFATSADKGAVRDKSLLK"
     gene            complement(23352..23702)
                     /locus_tag="PXD69_000791"
     CDS             complement(23352..23702)
                     /locus_tag="PXD69_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HDL6283011.1"
                     /translation="MWHFYLMTIELNNIQYPTDASGYLTNLNDWSVELAEKIAEKEQI
                     SLTAEHWEIIYLVRDFYQEYKTSPAIRMLVKTMAQKFGEEKGNSRYLQRLFPDGPAKQ
                     ATKIAGLPKPAKCL"
     gene            complement(23731..24396)
                     /locus_tag="PXD69_000792"
     CDS             complement(23731..24396)
                     /locus_tag="PXD69_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor protein"
                     /protein_id="HDL6283012.1"
                     /translation="MENRLAHSYSTGESLISTHKVLRNTYMLLAMTLTFSAVVAFVAI
                     QMNAPAMPWWGLLVGFYGLLFLTNATSNSSAGILSVFALTGFLGYTLGPILNRYIGAG
                     LGDIVALAFGATALVFFACSAYVLTTKKDMSFISGMMVALFVVLLVGIIANIFLAIPA
                     LSLALSSLFVIFSSGAILLATSNIIHGGETNYIRATVDLYVSIYNLFVSFLQIFGVLG
                     SDD"
     gene            24602..25150
                     /gene="pgsA"
                     /locus_tag="PXD69_000793"
     CDS             24602..25150
                     /gene="pgsA"
                     /locus_tag="PXD69_000793"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDL6283013.1"
                     /translation="MKLNFPTYLTLFRVGLTPLFIVAFYLPTKYAPEISTLIFFIASI
                     TDAFDGYLARKWNQTTRLGAFLDPVADKVLVAVAFVCVAEYYHTWWITIPICIMIARE
                     IIISALREWMAELGERASVAVSIWGKVKTTAQMLALGGMLWRQNQLMEILAFILLYIA
                     VGLTIWSMMQYLNASKNSLLKS"
     gene            25228..27066
                     /gene="uvrC"
                     /locus_tag="PXD69_000794"
     CDS             25228..27066
                     /gene="uvrC"
                     /locus_tag="PXD69_000794"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDL6283014.1"
                     /translation="MSEFNAKSFLLNVPHQPGVYRMYDSKGTIIYVGKAKDLKKRLAS
                     YFRSQLSSKKTEALVANLANIETTITHSETEALLLEHNYIKENQPKYNVLLRDDKSYP
                     YILLTKHKHPRLTAFRGSKKIAGEYFGPYPNVTAVRETLNLLQKIFPIRQCEDTYYKN
                     RSRPCLQYQIGRCLAPCVEGCYSPVEYDQQVNLVRLFLQGKDHQVVEHLVQKMEDAAE
                     ALDFEGAARFRDQIQSVRAVQEKQFVSNDRLDDLDIISIVYQNGIACVHILFVRQGKV
                     LGNRSYFPKVPSNTDLTELADTFVGQFYLQMNQHRTIPNQIVIDHQLSESKALSEILS
                     EQAGHKVSILDNAIRGDKQRYLALARTNAMAALVLQLKQESHIQSRYQALKEMLKMSE
                     IKRMECFDISHTMGNQTVASCVVFDENGPLKSDYRRFNIEGITGGDDYAAMEQALLKR
                     YNRELPPEKIPDIIFIDGGKGQLNRALDVFAKLDVEWDKSKPLLIGVAKGVERKAGLE
                     TLIISKWDKEIHLPPDSLALHLIQHIRDESHQHAISGHRKKRQKAFTESGLESIAGVG
                     AKRRQALLKYLGGMQGVKSATLEEIQSVPGISKALAEVIFDTLKNS"
     gene            complement(27071..27346)
                     /locus_tag="PXD69_000795"
     CDS             complement(27071..27346)
                     /locus_tag="PXD69_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283015.1"
                     /translation="MKKLILLGLSVALTACSTPQQQSTVPMDMQAVQDYHQRVINKQT
                     VDKNTKQHDEPLNQSDKRSESINLPIHPIIYPSIGVGYHYGWKRYRY"
BASE COUNT         7876 a         5334 c         6129 g         8019 t
ORIGIN      
        1 gactgtcaga tcaagtctga tcttctacaa ctaagccttc tcagaataaa taaattttca
       61 caagcggtgc aactttgcaa aaacttcggt attatgtagc agttgcacaa aaccccaaat
      121 tcattaaaac cgcttaaaaa tgaaatgccc taaactgatt tttcagtcta gggcatttat
      181 tatcacatat tatggttaat agggaaaact cacatcattg ttatgctggt gatatttttg
      241 ccaaaatgcg tgatattgtt ttttcaccga tgtgtttaat aaaaacggga ttatcaagac
      301 ataggtcggg caattccata gcattgcacg ttgtgtatcc gtgccgattt tggtgcgtaa
      361 gtaaccaaac tgatacatta gacccaatcc aaccgtcacc tattctaata gcataataac
      421 taaggtcgca tcattaaatt aaaagctcat tttttgcaaa aaatttccca aattccaccg
      481 cttgttggcg tacaataggc ataattttga tttacgatgg aggcagaatg tctgaaccga
      541 taaaacttac gcagttcagc cacggggcgg gttgaggctg taaaatttcg cctaaggtgt
      601 tagggacaat tttacaaact caattagaac aatttgtcga tccgaattta ttggtaggca
      661 atgaaacggc ggacgatgct gccgtctatg atttagggaa cgggcaggcc attatcagca
      721 ccaccgattt ctttatgccg attgtggacg ccccgtttga tttcgggcga attgctgctg
      781 ccaatgcgat tagcgatatt tatgcgatgg gtggcaagcc gattatggcg attgcgattc
      841 tgggctttcc ggtgaataaa ttgccggctg aagtggctca acaaattgtc gaaggtgggc
      901 gttttgcgtg ccagcaagcc ggtattgcct tggcgggcgg gcattcgatt gattcgcccg
      961 atccgatttt cggcttggct gttaccggca ttgtgccgac cgaacgggtg aaacgcaatg
     1021 cctctgcggt ggctgggtgt gagctgtttt taaccaagcc tttggggatt ggcattctaa
     1081 ccacggcaga gaaaaaaggt ttgttgaagc ctgaacatca acatctggca agcgaggtaa
     1141 tgtgccaaat caacttgatt ggttcagcgt tttccgaact gcctgaagtc acggcaatga
     1201 ctgatgtaac cggttttggc ttactcgggc atttaagcga ggtgtgtcaa ggctcgggct
     1261 tacgggcgga ggttgatttt gaggatattc aagtccttga tggcactaag gagtatattg
     1321 cattgggagc agttccgggt gggacaaatc gcaatttcga cagctatggg catttgattt
     1381 cggcaatgac ggacgagcaa aaagcgattt tgtgcgatcc gcaaacctct ggcggtttat
     1441 tagtggcggt gctgccacaa gcggtcgaaa aagtgcaaca aattgcaaat cgggcaaatg
     1501 tgccgttatt ccacgttggc agattgctgg aaatggaaca gggcaaacca cggattgagg
     1561 taatttgatg tttaaaccaa atgtaacaat ggcttgcgtg gtgcattgta agggaaagtt
     1621 tctgtttgtg gaagaaattg aatatggcaa acgtaccctt aaccagccgg cagggcattt
     1681 agaaaaagat gaaaccttgc tggagggggc aagccgtgag ctgtttgagg aaaccggtat
     1741 tcgggcagaa atggcaaatt tggtgaaaat ttatcaatgg caagcccctc gttcacaaac
     1801 cgatttcttg cgttttctgt tttcggtgga actggaagag tggctggagc cgaatccgca
     1861 agatgcggat attacccaag ccctttggct tactttagca gaatttgaag actacattca
     1921 gcaacaaggg caatgtgcca gaagcccgtt ggtggttcaa tcggtcaaag attatttaag
     1981 cggtgagcgt tatccattaa gtttgttgaa tgcgtttgaa tgggcgagaa atggaaaata
     2041 aaacaacaac ccaatttgat gtggtgattg tgggcggggc agtgaccggc tcggtgctgg
     2101 cattggcgtt aagtagtttt actcatcaca aaatctcgat tgcgatagtg gaaaaatcgc
     2161 tgccggacta tgaacagcaa ggcggttttg atgctcgcag tattgcctta gccgaaggca
     2221 gtttgcaaaa aatggggcaa atcagaccgc ttgcaggctc aagtttaggc gagatgatta
     2281 gcgaaatcgg cacgccgatt cagcaaattc aagtagcgga taaagggcat tttggtaaaa
     2341 cgaccttgaa agcaagcgag cagaatgtgg ctcaactggg tatggtggtg gaacttgcaa
     2401 aattcggcag aaaattgacc gcttgtcttg cacagcaagc taatattacg cttttttgcc
     2461 cgaatcaagt ggttggcatt gagcgttccc aacaacattg tggattgagc ttgaaaaatg
     2521 gtgagaaact aagctgttcc ttgctggtgg cggcagatgg tattcaatct cagattgcaa
     2581 aacagtgcgg tgtggaaacc gtaaaagtaa gggattatgc acaatcggca attatcgcca
     2641 atgtggaact gagtgaatct caccaaaatc aagcctttga atattttacg cctcaaggcc
     2701 cttttgcttt attgcctttg agcggaaata tgatgtcgtt ggtgtggtgt gtgaaagagc
     2761 cgaacgagtt aatccaactt tcagacagtg aatttttagc ccgtttgcaa caacaatttg
     2821 gttggaagtt agggcaattt gttcgagtga gcaagcggtt tgtttatccg ctcattttgc
     2881 aaaaagccca gtcgcatatt caccaccgct tagcagttgt cggcaatgcc gcacaaatgc
     2941 ttcacccggt tgctgggcaa ggtttcaact taggcttgcg tgatttgact accttagcgg
     3001 aattagtggc tttggcgttt aatcaaggga aagatatagg cgaattttcg ctcttatcaa
     3061 cttttgagaa tgagagaacg caagatcaag ccagaatgat aaatgctaca agcggtctga
     3121 tttcgctttt ttgttgcgaa atgttaccag ttcaggttgt gaggaattta gggttattaa
     3181 cggtttccca ttcaaaaata gccagagatt ttgttgctaa tcaggcatta ggttggtaaa
     3241 aaacacaaaa gcagcaattt tctatttgac actgttttta aaaaggcgta ttatccaacc
     3301 cgtttaaaaa tctcaccaaa gccttgaatg caaattcaag gctttttcct ttttagtgaa
     3361 agcctatgaa ttttgtttgc cgtaaaatcg gcaaaaaaat tttgcctaaa attcgcaatc
     3421 gtttgcgaaa taggtttata gcgttgtttt catctgggta actgcaatgg ttacatcgca
     3481 atacatcaaa gagagtaaaa aatgaccaca gaaaatatga gtacgccaaa gcaggcgttt
     3541 atcgggctgc aaatgctgtt tgttgcattt ggggcgttag tattagttcc gctgattacc
     3601 ggtttagatc ctaatgttgc ccttcttacc gccggtgtcg gtacgttaat cttccaaatt
     3661 tgtactaaac gtcaagttcc tgttttcctc gcatcgagtt tcgcttttat cgctccaatc
     3721 caattcggtg ttcaacaatg gggaattccc gtcacaatgg gagcattgct ctgttccggt
     3781 tttatttata tggcattatc tgctttagtg aaagcgaaag gggtgaatat tctgcataaa
     3841 tacttccctc caatcgtgat tggaccggta attatggtga ttggtttagg tcttgctcct
     3901 gttgcggtgg atatggcaac gggtaaatcg gcgaatattg cctataacac cgctattatt
     3961 gtttcaatga taacgctggt aactacgctg attgtggcgg tgtttgcgaa agggctatta
     4021 aagctcgtgc caatattagc aggtttaacg gtgggatata tcttgtctgt ttttatggga
     4081 ttggtggatt ttactaaagt ggttgaagct ccttggttta gtctaccgaa agtttccgca
     4141 ccggaattca aattagatgc aatcttgtat ttattaccta tcgcacttgc tccggcagtc
     4201 gaacacttag gcgatgtaat ggcaatcagc caagttgccg gtaaagattt tatgaaaaaa
     4261 ccggggttac accgcacgct tttaggtgat ggtttagcaa cttcagcagc tgcggcatta
     4321 ggtggcccac caaatacgac ttactctgaa gtaaccggtg cggtaatgct aaccaaaaac
     4381 ttcaatccga aaattatgac ttgggctgcg tgctgggcta tcgctttctc attctgcgga
     4441 aaaatcgggg cattccttgc cactatccct acttttgtga tgggcggtat tatgatgttg
     4501 ctgttcggtg cagttgcggt tgtggggatc aatactctaa ttaaagctaa agttgattta
     4561 agcattccac gtaatctttg tattgcttct gtagtaatga cattcggtat tggcggtatg
     4621 ttaattaaca tcggcgaatt ctcattaaaa gggatcagct tgtgtgcatt agtcgctatt
     4681 gtacttaaca ttgtattacc aaaagaaaaa gtagaagatt ctgctgctca ttaatcaaag
     4741 gacgctgtgg cgtccttttt gctaataacc ctctatttgt aaataaaaag gaataacact
     4801 atgcaaaaac tcacattttc accaccactt ttaaatacgc cttgcccttg gtgttcggag
     4861 ttagagagct tgcgtgaact ttatgcgtgt gaatataccg gtgcggtaac aacccgtact
     4921 tcaatgcctc aaccatatcc acacgattgg gcgaagaacc aatatgtact ctttgattcc
     4981 aacgcacaga aaacagcaag tgtgaatact caagatgcaa ctagcttaca aacagcaagc
     5041 cttaacacca tcggtttaag cccaaataat ctggatacca ccatcagctt tgtacgcacc
     5101 atttcaaatg agctgacagc gccatcaagc aaaccattta ttatttcggt gtttggttca
     5161 cccgaagagg tgggggaatg ttatgaaaaa attgttgctt tccaaactga agtgaaaatg
     5221 cctttggcaa tggagattaa tatctcttgc ccgaatattc cgggtgaaat ttcgcctgct
     5281 tattccgcag aagaattatc acattacttg cacgcactac aaacttcgct aaaaaaactg
     5341 gctcaaggtg ataatacttt accaatcggg attaaaattc caccttttac ttaccaaaat
     5401 caatatgatg aattaatcaa aggcttatta caagcggtcg aaaatggcga aaatttacca
     5461 atttccttta ttacttcaac caatacgctt ggctcatcgc ttgtcttaaa tgctggcaaa
     5521 gcggtattaa attcagaagt gggaacgggc gtaggcggaa tggcaggaac ggcaatccat
     5581 gcactttctt tggggaatgt ttacacgatt cgccaaatgt tagatcaaga gcctaagctc
     5641 aaacatcttc aaattattgg tgtgggcggc gtgaatgata aagccggctt tgagcgaatg
     5701 aaatcggttg gggcagactt tgtggggtta gctaccgcat taggggtgaa aggaatcggc
     5761 gtttttaaag agattctgtc tgaataatga agaggagggc gtgcattgca cgcccgaata
     5821 aatgaaatta gcctaaccat ttctccacta attcattagt ggtttcttta tgtacccaca
     5881 tactgccaag ttccggcatt gggaatttgg tgtggttgta gccgacaaat tggcggaaat
     5941 caaacacggc gtgcgggtag ccgttgatca gtaaaaaggc ttgatagccg tcttcactcc
     6001 agcaaatttc taaacggcga ggttctttta atgaattttg ctcaatatcg ctgacccgaa
     6061 acacaaataa actatccact accggctgtt cggtttggtg taagtccatt gcataaaagt
     6121 agccgctttc ttcatcaatt tcaaacatca ctactaaatg ttcgtgctgg gttgaatgag
     6181 cgccattacg gtaaggttcg ttcagtagaa tatgagcagt taaaacagag tagagcatta
     6241 aattatcctt ataagtaaaa tgccaccgat ttctcagtgg catttaaata tttaatcagg
     6301 caattacgct tgacctttaa tctctttacg gccgttgaac ggagccggtg taccagcacg
     6361 ctctaacgct tcttcgatac ggattaactg gttgtatttc gctacacggt ctgaacggct
     6421 cattgaaccg gttttgattt gacctgctgc tgtacctact gctaaatctg caatggttgc
     6481 atcttcagtt tcgcctgaac ggtgagagat aactgcggtg taacctgcat ctttcgccat
     6541 tttgattgca gctaaagttt cagttaaaga accgatttgg ttgaatttga ttaagattga
     6601 gtttgcgata cctttctcaa taccgttttt caagattttg gtattggtta cgaataagtc
     6661 atcaccaact aattgtactt tgtcgcctaa tactttagtt tggtatgcga aaccttccca
     6721 gtcagattcg tcttgaccat cttcgataga cacgattggg tactctttgc ataagccttc
     6781 taagtagtga gtgaactctt gtgaagtaaa ggttttgcct tcgcctttca tatcgtacac
     6841 attgcgttct ttgtcgtaga attcagatga tgcacagtcc atcgctaaag ttacgtcttt
     6901 acctaacaca tagcctgctt tttctaccgc ttctttaatg cacgctaatg cgtctgcgtt
     6961 tgaagccaag tttggtgcga aaccaccttc gtcacctaca gcagtattta agcctttcgc
     7021 ttttaatact tttgcaagat tgtggaatac ttcagcaccg atacgaagag cttcttttaa
     7081 tgtagaagca cctaccggtt gaatcataaa ttcttgaatg tccacgttgt tgtcagcgtg
     7141 ttcaccacca ttgatgatgt tcatcattgg taatggcatt gagtaaacac ccggtgtgcc
     7201 gtttaattca gcaatgtatg cgtaaagcgg taagcctttt gaagcggctg ctgcttttgc
     7261 tgttgctaaa gaaaccgcta agatagcgtt tgcaccgaat tttgatttgt tttctgtgcc
     7321 atctaaatcg atcataattt ggtcgatttc agcttgtgca gaaccgtctt tgcctactaa
     7381 tgcgtttgca atttcgttat ttacggcaga aaccgctttt aatacacctt tacctaagaa
     7441 acgacctttg tcgccatcac gtaattctaa tgcttcacgt gaaccggtag aagcacctga
     7501 tggagcggct gctaagccta caaaaccacc ttctaagtga acttctgctt ctacagttgg
     7561 gttaccacga gagtcgatga tttcacgacc gattacttta acaattttag ccattgttga
     7621 tgtcctctaa tatacgagtt aatagaaaaa agaataggta tatagtaaag cgattttctg
     7681 cttttgtctt ggaaaaactg attgagtggc agaaaatttg ccactaattt gatctaagac
     7741 tatattcgcc tgagattata gcaacctttg caaaaaacgg caaaaatttg cccgcttgta
     7801 atgcttattt tttgactaaa aaagtcaagg tttcataatg tgctgtgtga gcaaacatat
     7861 caaacagctg cactttgtgt agttcgtaat ttgtcaaaaa tgtaaaatcg ttcgccattg
     7921 agacggcatt acaactggag taaatcaaat aaggtgagcc taattgattt aaaaattctg
     7981 ctaatagttt gccgatacca cgtcgaggtg ggttcacaat cactaaatcg ggtggagaac
     8041 cagcttcatt taaagcaaat tgtgcagaat ctaatgaggc aaattttacc tgctttaggc
     8101 cgagtttttc agccgatttg gtcgcacttg caatagctga ggctgaaatc tcaatgcctg
     8161 tcagctccac gttcgagttc ttcgcttgca aggcgttggc acaatgtaag ccgaaaccac
     8221 cgacaccgca gaacaagtcc cacaatttag caataggtaa atgctcaatc cagctttgtg
     8281 ctgtgtggta aagctggctt gctaccacag ggttagtttg gaaaaagccc tgagggcgaa
     8341 taaatagcgg tatgccgtta aaatgttctt ccagcacttt ttgttcggtg aggaaaatct
     8401 cagtttcgcc ttctaaaaga gcagcgtgtt ggggctgaat attcagacta actactgagt
     8461 tgggtggcag tttttccaac agttcgggca attcccgttc aaccaatgca cgctttgctt
     8521 cactacgaac cacaaaacgg agcataaatg attgattata ttggctttcg gtaatcagaa
     8581 tatattttag ctcacctttt ttcttactga tgttatacgg cactaaacca gctcgagcga
     8641 taaaatcttt caaaatcgga aaaagtctat gaaatgagga cgggtagagc agacagtcgg
     8701 ttaaatccac cccgctttga gcatcatttt gatcttttaa aatgcctaaa atcgggcgtt
     8761 ctacactgcc ggagaccacc attttcgctt tgttacgaaa ttgcgaaatt ggcgagccga
     8821 caagcggtaa gatttccgtt ttattttgca aaataaacgg caaaatcaac cgcttgagat
     8881 cggcctcttt ggcggctaat tgcgtgctgt atggcttttc aatccactgg cacgaagtac
     8941 agtcgccacg ctcaaaatgc gaacaatgca acaagctaga cattcgcttc cttccattcc
     9001 agccagttgt tttgtaaggc cgttaattca gcctgagttt gttggtagcg agagctgttt
     9061 tccagctctc gccaagtcac ggttttgcgt ttcattaaag aaaggcgacg ttctttttgt
     9121 gcttgagtcg gctgatattt cagcccgtct aacacttgca ccaggccttc aggctcgtta
     9181 caaaggagca ataaatcaca gccggcttgg attgcttttt cagaacgctc gacaaaattg
     9241 cccataaagc ccgcaccttt cattcccaaa tcgtcagaga atatcacacc gttaaagttc
     9301 agctgtttac gcaatacctc tttaagccaa tagcttgaac cgcttgccgg ctggctatca
     9361 cattgggtgt aaacgacgtg ggcaggcata atggcagaga gttttccttt ggcaataagc
     9421 tgtttgaacg gcagaatatc gtgattaaaa atccgctctt tcgggcgatc atcaaacggg
     9481 gtttctaaat gcgaatcggc taaaacgtgt ccatgaccgg ggaagtgttt gccggtggtc
     9541 gccataccga tttcacgcat tccgtcaata aaggcttcgg caacaggcaa aatcgctgct
     9601 ggctcttgcc cgaatgagcg atcgccaatc gctttgcatt cgtgtcctaa atccagtacc
     9661 ggagcgaaac tgaggtctat atcgagggca aacatttctg ctgccatcaa ccagccggtt
     9721 tctttcgcta attgcattgc ttgctctggc gttgtggcaa gttggttaaa agattgcatt
     9781 gccggcagtt tagtaaagcc ttcacgaaag cgttgcaccc gaccgccttc ttggtcgaca
     9841 gtaataagca acggtttttt cacccgctgg cgaatggatt tcactaatgc ctgaatttgt
     9901 gctttgtcgt agaaattacg ggtgaataaa attagcccgg aaactaaagg gtgttccagc
     9961 atttcgactt cttcttgagt cagttcttta tctttaatat caatcagtaa cataattttc
    10021 gttgagctat ttgcaaaaaa atgagcagat atgaccgctt gttgtgccta ttctacatta
    10081 aaaagccctt gatgttgatc aagggcgaat gattaagggc ataaatgaga cagagcaatt
    10141 atgcttgttc taatttagct tggttacgac gcatttttat gttgagcatt tcaaccacaa
    10201 ccgagaagcc cattgccgta taaaccgctg cttttggaat atgaatatca aaaccttcgc
    10261 cgactagtac aataccgatt aaaatcaaga acgctaaagc gagattttta atggttgggt
    10321 tgttatctac aaagtcccca atggttttcg ctgctaacat cattaccgca actgcaatga
    10381 taatcgcaat aaccattacc ggaatatcat ctgccattgc cacagcagta atgactgaat
    10441 caagggagaa aataatatca aaaattgcaa tttgaattaa caccataaaa aagctggctt
    10501 ttttaatgga ttcgcttttt tcttcgtgag attcggcaga aatggattct ttcagctcca
    10561 ttgcactttt aacaatcagg aataatccac cgatgagtag aatgagatct ctacctgaaa
    10621 ttggattgtt gccaatagtg aaaagaggct cgaccaaacg catcatccaa gcaagcgaga
    10681 gaagcaataa aatacgggtt cccattgcca gccccaagcc gataattcgg gcagattggc
    10741 gttgttcaat aggtaaacgg gaaacgagaa tactgatgac gatgatgtta tcaatgccta
    10801 atacgatttc aagcccggta agtgtaaaga gcgcaaccca agcttcagga tttgtgatcc
    10861 agtcaaacat aaaaatgtcc ttttaaaaat aagggattaa gtgatatttt ctatcaaata
    10921 gaattaaagc cgacatctta tagagtgtga ggacaaattt aaagggggca atgcaaaaag
    10981 ttttgtaaaa tttcggcggt aaaatgttta cgcaaataga aaccaagagg gagagattga
    11041 acaatctccc ctttagcgtt gatagcagag gtgatagagc ggttatttct acctttgggt
    11101 ctgagttgta acacttcgcc taaggttgca ttaattttat gcagttcacc taacacaatc
    11161 aactccatta attcctccca atcttgctgt aggcgggatt cttgtgtgat agtcggagac
    11221 cataaaatcg gctgaccgat atggcgttcg gcaaggggta tctttcgttc cccttcaacc
    11281 ggaatccaaa gcacacggga aagcttatgt ttaacgtggg aggtttccca aataataccg
    11341 ttgttttggg ttaaaggagc aaggctgacg aatgtggttt ccagcggtaa tcctttctga
    11401 ttgaccggaa tggttttcag ctcaatgcct aaatgtgcaa aatcctgttc ggctttactg
    11461 ccggctttcg cacctaaagc ggtttcaatc agagtaccga cccagccttt atctcgtttc
    11521 agatctgctg gtatcggaat atgaagcatc tcggcaattt cacctaaagt gaaccctgcc
    11581 agccattccg ctttgcttaa taatgcctgc tcggttggag agaatgtaga taattgcatt
    11641 gcacttagtt aattagacta aactggcaag cggtcaaatt taggcagaaa tttgcaaaaa
    11701 attactaaaa aataaccgct tgtgaggaaa ttacatccaa gcattactgc gaataacgcc
    11761 tactgcaatg ccttcaattt caatatattc ttgagcaggg tttactacaa tcggttttaa
    11821 ttcatcgttt tcagggtgta agtaaattaa ttcacctttc ttctctaagc gtttaacagt
    11881 cacttcatca tttacccgag caaccaccac ttgcccgtta cgagcggtat tggttttatg
    11941 aacggctaat aggtcaccgt ctaaaatacc gattttttcc attgaattgc catttacttt
    12001 gagtaaataa tcagcacttg gattaaacat cgcaccattc accgggtaat ggttttcaac
    12061 gtgttcaacc gctaaaatag gtgtgccagc agctactttg ccaatcaacg gtaagccttc
    12121 atcttcatcg ttggcagctt ggttttcgtc ttcgactaaa atgcgaattc cacgagatgt
    12181 acctgataac atttcaatat agcctttacg agcaagggct tttaagtgtt cttctgccgc
    12241 attaggtgat ttaaagccga tttcacgggc tatttctact cgggttggtg gcataccggt
    12301 ggtttcaata tggtttttga cgaaatcaaa aatttcttgc tgacgggcag ttagatgttt
    12361 acgcatttta agttaatcct cactgtcttt atatacagaa aatattgata gtatatacag
    12421 tatttttgat tttgtaacta ataatttcac gaaattccat aaaaatttat ggtagaatgg
    12481 aagaaattag aggttagacc tccaacaata acgattctaa aaggatattt atatgtctgg
    12541 cttattaaat ttttatcgag ctttcctaaa cttaccactt tcacttttag taaaatctcg
    12601 ctctattccg actcatccgg tggctgaact ggaactaaat cttgaacagc cgattgtcta
    12661 tgttctacct tatacctcgc aaaccgattt attaatttta caaaaaaact gcttggcttt
    12721 gaatttgccc gatccgttgc aagaaaatgt gattgaaggg caaacattgc ttcgttttgt
    12781 atttttagat gaaggtcgcc gtttttttaa atctaaaggg gcgaaaagtg agacagagtc
    12841 gattttttat cgttatttag atttacatcg tgctaatgct gaattagacg tccaattagt
    12901 gccggtttcg gtattatggg ggcgggctcc gggcaaagaa gatgcccgcc atttacaggt
    12961 gcttacctca ttccaacgtt ttttatccat ggtttggttt gggcgtgata attttgtacg
    13021 tttctcccct gcagtatcgt tacgctatat ggtaactgaa tatggtgcag atgaaaaaat
    13081 cgctcaaaaa atcgcgcgtg tggcgaaaat gcactttgca aaattgcgtt attcagcaat
    13141 ggggcctcgt ttaccaaatc gtgatgcgat gtttaataaa atcctgaatt cagaggtgat
    13201 tcaagctgcg attgcggaag aagcgaagaa atcatcgcct gaaaaggctc gcaaagaagc
    13261 cgagaaaatc attaatgaaa ttgccgctga tgtaaaacac gagagtttgc gtgtagcaga
    13321 tcgagttctg agctggcttt ggaataagct ttatcaaggg atcaacgtgc aaaatgcaga
    13381 ccgtgtgcgt aaattggcat tagaaggtca cgagatcgtt tatgtgcctt gccaccgtag
    13441 ccatatggac tatttgctcc tatcttatct actttaccat caaggattag taccgccaca
    13501 tattgccgct gggatcaatt taaatttctg gccggcaggc ccgattttcc gtagttgggg
    13561 agcatttttc attcgccgta cctttaaagg aaatcgcctc tattccacca ttttccgtga
    13621 atatttagcg gaattattct atcgtggtta ttcggtcgaa tattttattg aaggcgggcg
    13681 ttcacgcaca ggtcgtttat tagagcctaa aaccggtatg atgtcgatga gcctacaagc
    13741 cttacagcga gggctgaata gatctttaag tattgtgcct gtttatatcg gttatgaaca
    13801 cgtcttagaa gtcgatactt acgctaaaga gttgagaggt gcggcaaaag agaaagaaaa
    13861 tgcgggcttg gtgctacgag tgctgaaaaa actgaaaaat ttaggtcaag gatatgtgaa
    13921 tttcggtgag ccaattttgg tgaataatta cttaaatcaa tatttccctg agtggaaaga
    13981 gccttccgaa gatggacgac ctaagtggtt aaatgaagcc gtggataata tttcacatca
    14041 agtaatggtg aatatcaata aagcggcagc agttaatgcg aaaaacttag tggggtcagc
    14101 attattggca tctcgccagc gtgcattaac ccgtgaacaa ctcattgaac aacttggaag
    14161 ttatattcag ttatttcgta atgtacctta ttctaaagat atgacattac caactgaaag
    14221 tgcagaagtg atgttgaatc atgttattca tttacctcgt tcgggcgttt taattgaaaa
    14281 agataatttt ggtgaactgg ttcgtttaga acgagaatct gctgtgttaa tgacatatta
    14341 cagaaataat gtgcagcatt tatttgtgtt gccttcactt gttgcaagta tggtacttca
    14401 tcatgaggct gtttcgaaag atgttgtgat taagtcggtt aatcgtattt atccattctt
    14461 gcaagcagag ttattcttac actttaagca agaagaatta aaagcacata ttgaagcaat
    14521 tattgcggaa ctaagtcggc agggggtgat taaaaacgaa agtgatatgt taatgatcaa
    14581 tcgctcacat attcgtacct tgcaattaca ttcagctggt gtgcgtgaaa tccttcaacg
    14641 ttattatatt agcctaagtg tcttgttgga gcagccaaat attagtcgtg gctatttaga
    14701 aaaagagagt agttcaattg ctcagcgttt atcagtcttg catggtatta atgcgccgga
    14761 gttttttgat aaggcgattt tctctacctt tacatcaagt ctaaaagcac aagggtattt
    14821 tgatggtgat gataatttag cgattgcaaa agttaaagaa acggaatcgt tgttacgtag
    14881 tttgatttcg attgaagttc aacagaccat tcaaggtgcg atggctaaag tcgcagaatc
    14941 tgtagagaat cctaatatcg caggataata aatcaaagaa gggcgctaac aagcgctcgt
    15001 ttcttgcaat tttgttgcca aaaataaaag ctgaatgcgc gaccacattc agctttttta
    15061 cttcctatat aattattttg gttcaccgat tggtaaaaca gtcttaccaa aactttcatt
    15121 aataatatcc gcagcggcta agtagaacgc taagaatgcg gttaataaac cgaagttacc
    15181 accaatgtta gttagggtgg tgttatgggt aaaatcacct gcggctaaaa ggtagaaagt
    15241 aatggttaaa cttaagaaaa tagcttgtaa tgcacgggct tttgctagtg tgccgatgaa
    15301 catcataagt gtgaatgttc cccaagctac taagtaccaa ccaacgaatt ctgccgatac
    15361 attcgcagca aagaacactt taaataatgc aaaagaccac cagaatgcac catagctggt
    15421 aaacgcagta aagccgaacg tgttaccttt agcaaattca aacatacctg caatcatttg
    15481 tgatgtgcca ccgaaagcaa atcccattgc taaaactaaa cctacgtttt caccgctgaa
    15541 tgtaccgtta ttgattaggc ttagtaaaaa tgtagtaagt gcaaaaccgc ataaaccgag
    15601 cggagccggg ttagttcctg aatttggagc tgacattgaa aacctctgtt atattgttac
    15661 accataagtg tggtaattgt ttatttacgc cgataaatca gacgttatgt gcctaaaatt
    15721 tagggcgata aagtatagcg attttgcagt aaattgacta gaaatttccg agacaagcgg
    15781 tgagattttt gcaaaatttt gccaaaaaat gaccgcttgt tgttgtcatt tagctatgga
    15841 tttaactgcc gatattggct gggtgttacg caatattgct ttttaaaggc ggtaataaaa
    15901 tgcgactcgg attggaagcc gcaagataag gcgatactta ataccgaccc agcttggctt
    15961 ttgagcagca ttgctgcttt ttgtagccta attttgtgta caaaagcatg tgggctaata
    16021 cataaatgtt tgttaaataa gcggactaac tgggcacgag aaaggtggat aaatgccgcc
    16081 atatcatcga cttgccattc gtgttcggga ttaagcaaaa tagctttgat caaaggtctt
    16141 aagtgtaagt cttgccaacc ttttaaaata ccgaataact gattgttatg gttaactaga
    16201 tgttctcgta agatcatagt taaaataaca acagcaagcg agttaaccac agattttacg
    16261 gctaaattag gtgtttctgc ttcttgtttt agaatatcta acattgcttt taatggtgtc
    16321 tcggcaactt gaaatacgat catttcaggt aagctttcca ttaattcggc ttgatggtca
    16381 taataaaaat ggaggcagaa catatcgcat tctgattgag aaagtcctgc ttgggtgagt
    16441 gtaaatgcac ccaattgttc agggtttacc gcatttttgc tggtcaaagg ctgtatttga
    16501 ctacgtaatg tatgatcggc aaatctgggg aaaaatacaa tatctccctg tttaaggtga
    16561 tgggttttcc cattatgttg tagataagct tgcccatagc tgatgatatg agcgattgct
    16621 tgtccggttt gatgcggatt ctcaagttgc caatctccct gtaactgaca tttcacactg
    16681 attccggctg agatttgagc gaaagctaga agcctatcta atatatccat tgttcattcc
    16741 ttatatttcc accttaaatt gcgattattt cattataata tgagctgatt tgataataaa
    16801 gtttatcaga taaacgcaat aataaatgcg ttttttcata ttattcactt taggaggaaa
    16861 tcaatatgtc ttcattccaa aattggacag aacacacagc tcacgttaag caatcttttg
    16921 gtaaattagg gcaaaaacac cctaaaatgc ttgaagctta taaagcatta ggtacagcgg
    16981 ccgcagcgga agcattagat cacaaaactc gtgaattaat tgcattagca gtagcgatta
    17041 caacacgttg tgaaagttgc atcagtgtac acgcagaaga agcggcaaaa gcaggtgcaa
    17101 ccgaaagcga aattgccggt gcattagcga ctgcgattgc attaaatgcc ggtgcggcat
    17161 atacctatgc tttacgtgca ttagaagcgg tggaagagca aaaataagga gcaataaatg
    17221 aagaaattgg cttggatttt aggctttgca gctatgatgc caatgatgtc tagtgctaaa
    17281 caagcatcag ttcagcaagt gcaggctgaa aaagcagcgg gcatttggat tgatgtacgt
    17341 tctgctgaag aatttcagca agggcattta aatggtgcaa ttaatgtaac gcatactgaa
    17401 attgcacaac gtatcgcaga agttgctcca gataaaaatc agccgattca tctttattgc
    17461 cgctcgggtc atcgagctga agcggcgctt aatgagctaa aaaaattagg ttacagcaat
    17521 gtaactaatc atggtggtta tgacgatctg attaaagccg ggttgaaata actgttttga
    17581 gtgccaagca tttgcttggc acttttcgtt tatatctgag gttaaaaatt atgagtgctt
    17641 ttaacaattt tgttaatttt gttgcaaata ttgttgctcc aatgcaacgc caattcatta
    17701 actttgtacg tattgccatt tgtatcgtga tggtttggat tggtggttta aaagtctgcc
    17761 aatatgaagc agacggtatt gcccattttg tgtctaatag cccgttcttt agttatatgt
    17821 acaaaaaagg cccgaattta gttgatgacg gcacaggtaa aatggtgatg gaatataccc
    17881 ttcacaaaaa ccctgaaggt aaaatggtgg caaaaaacat cgaatggcat aaagaaaacg
    17941 gcacttatac tgcatcttat atcatcggtg caaccattgt gacggttggt ttattgacgt
    18001 tatccggtat ttggttcccg gtttccggta tggcgggggg cttactcacc tttggtatgt
    18061 cgattgttac actctctttt atgatcacca cccctgaaat ttgggtgccg aatttaggtg
    18121 gggatatgcc aaccccagcg catggtttcc catatctgtc agcagtcggt cgtttaattg
    18181 tgaaagatgt gattatgatg gcaggcggct tggttgccgc agcggaatgt gcaaatcgca
    18241 ttttagccag acgtaaagcg attgcttaat tgatagtggt aatgcaagcg gtcattttct
    18301 tgtaaaattt tgcaataaaa tgaccgcttg ttttttgtca atttgccata atttcaagta
    18361 taattcaatt acgtaatcgt ttgcttttat ggagaggaat aaaatgacaa caatcggtac
    18421 accgttaaga acgaacgcta caaaagtgat gatgttaggt tcgggcgagt tggggaaaga
    18481 agtggtaata gagctgcaac gcttaggcgt agaagtgatt gcggtggatc gttatgacaa
    18541 tgcacctgca cagcaagtgg ctcaccgtgc ttatacgatt tcgatgttag acgggaatgc
    18601 attgcgagat ttggtggaga aagaaaaacc ggattttatt gtgcccgaag tagaagccat
    18661 cgcaactgca accttggttg agttagagca agagggatat aacgtaatcc caacggcaaa
    18721 agcaacgcaa ttaacaatga atcgagaagg cattcgccga ttggcggcag aagagttggg
    18781 cttaaaaacg tcgccttatc gttttgtgga taattttgaa cagttccagc aagcgattca
    18841 agaaatcggc attccgtgtg tggtcaaacc gattatgtct tcttccggac acgggcaatc
    18901 agtaattaaa tctgaagcgg atattcaaca ggcttgggat tattcgcaac agggcggacg
    18961 tgccggcggt gggcgtgtga ttgtagaggg ttttatcaaa ttcgattatg aaattaccca
    19021 gcttaccgtt cgccatattc acggcacgtc gtttttagct cccatcgggc atattcaggt
    19081 tgatggcgat tatcgtgaat cttggcaacc gcagcaaatg tcggacattg cattgaaaaa
    19141 agctcaagaa accgcagaaa aaattacctc tgcactgggc ggaagaggga ttttcggcgt
    19201 ggaacttttt gtctgtggcg atgagattat ttttaacgaa gtctccccac gtccacacga
    19261 taccggaata gtaacaatgg catcacaaga gctttctcaa tttgctctgc acgcccgtgc
    19321 gattttgggc ttaccgattc cggaaattta ccgcatcagc ccggcagctt ctaaagcgat
    19381 tgtggttgaa gggaaatcgg ataatgtgcg ttttggcggt gtagataagg tattagccga
    19441 aatcgggacg aatatccgct tattcggtaa aggcgaagta aacggacacc gccgattagg
    19501 ggtaattctt gctcgtgatg aaaatacagt gagagcatta gaaaaagctc ggcgagctta
    19561 tgataagtta gatattcaat tataaagtca ggattttgat attcgttgat agtaggcatt
    19621 ttatgcctac tatcctatag gcctctaatc aaattggatg aaaaagttga agattgttaa
    19681 tcctctttgc cgagaatttg gttcacttcg ctcttataca atactgcttt tgctccaaat
    19741 acggcttgta caccgccacc gacttccagc acgtcaatcg caccgagttt tttcagtgtt
    19801 gctttatcca cggctttcac ctctttcact gccacacgca gacgggtaat acaagcatcc
    19861 acattttcga tattatttgc agagccaaga gcggcgataa ttttatgggc attttcagtc
    19921 agtgagctgg tttgttgttc gactacctct tcactctctt ccgcacgtcc cggtgtcatt
    19981 acgttgaatt ttttgatcag gaataggaac gagaagtagt aaagtgccgc ccacggcaag
    20041 ccgactatga tcactcgaag ccagttagtg ttctcgttgc cttgcaaaat gccaaacagg
    20101 gtgaagtcga tcacgccacc ggagaaggtg ttaccaatcg agatgttgag taagtctgca
    20161 atgtagaacg acacgccgtc taaaaaagcg tggaacacat agagccacgg ggcaacaaac
    20221 aggaacataa attcaatcgg ctcggtaatg ccggtgataa aagaggtgag cgctgcacct
    20281 aagaacagac cgctaatcgc accacggcgg gctttcggca cagcgtgata catcgctaaa
    20341 caggcggcag gtaagccaaa catcatcgta tcgaaacgtc cagcgaagaa acgtgtacct
    20401 tcggtaaata agccttgatg ggttggatcg gcgagttggg cgaagaagat tttttgcgcc
    20461 ccgataatgg tttcaccatt taccacttct gttccgccca attcggtgta ccaaaacagc
    20521 gggtagatca tatggtgtaa gccgaccgca ccgcttaacc gcattaagaa accgtagaaa
    20581 aaggtgccga tttcgcccat ttccgcaatc ccttgccctg ctgaaaccaa ccactgttgg
    20641 aaagccggcc agatcaaaaa gaacactgcc ccgacaaaaa tcgcagcaaa ggcggtcaca
    20701 atcggcacaa accgagagcc gccaaagaag ccgagaattt gcggcagctg aatgttgtgg
    20761 tatttgttat gcagtttcac cgtaatcaag cccattacca gcgagccgat cacaccggta
    20821 tcaatccctt tggtttcagg aggaaacagc ggaatgaggg cagaaatcgt gcctgtcata
    20881 atcaaataac cgaccactgc tgccagtgcc gctacgcctt tatctcgttt tgctaatcca
    20941 atgcctaaac cgatacacag taataatgca aggttgccaa acaccacact gcctgccgat
    21001 gccataatct ggaaaatgcc ctgtaaagtc gggttatcca gtatcgggta ggcttgcacc
    21061 gttgccttat tcgacaaagc tccgccaatc cctaacagca aaccggctgc cggtaaaatc
    21121 gcaatcggca gcataaaagc ttttccgact tgttgcagtt gtttgaacat aaaatttctc
    21181 cttttttatg gttgtatttg atggtttata gcatactgaa atttagccgt atgaggtgtg
    21241 atataactca cagatttgca aaatttttag caaattcgac cgcttgtaaa aaaattaccg
    21301 cttgcggaaa aattgaagta gaattaagca tttttttagc aaacacaaca taaaaaattt
    21361 ggagaagatt atgcctattt tacgttcagc aacttccact cagggtcgta atatggcggg
    21421 ggctcgtgca ttatggcgtg caaccggtat gaaagaaaat gattttggta agccgattat
    21481 tgcagtggtg aactcattca cccaatttgt gccggggcac gtccacttaa aagatatggg
    21541 gcagttggtt gcggcagaaa ttgaaaaagc cggtggggtg gcaaaagaat tcaacaccat
    21601 tgcggttgat gacggcattg caatgggaca cggcggaatg ctttattctt taccaagccg
    21661 tgatttaatt gcagacagtg tggaatatat ggtgaatgct cactgtgctg atgcgatggt
    21721 gtgtatctct aactgcgata aaatcacccc gggaatgtta atggcagcaa tgcggttaaa
    21781 tattccgact atttttgtct ctggtggccc gatggaagcc ggaaaaacta aactttccga
    21841 tcaattaatt cgcttggatt tagtcgatgc aatgatcgaa agtgccgacc cgaatgtgtc
    21901 tgatgaacgt attgatgcga ttgaacgtag tgcttgcccg acttgtggtt cttgttcagg
    21961 tatgttcacc gcaaactcaa tgaactgttt aactgaagct ttaggcttaa gtttaccggg
    22021 caatggttca atgttggcaa ctcatgctga ccgtaaagag cttttcctaa gagcaggtcg
    22081 tgaaattgtg gaactttgcc gtaaatatta ccaacaagac gatgagagcg tgttacctcg
    22141 ctcaatcgct accttcgatg catttgaaaa tgcaatgagc cttgatattg caatgggtgg
    22201 ttcaagtaat accgtgcttc atttactagc gactgctcaa gaagccggcg ttgattttaa
    22261 aatggaagat attgaccgcc tctctcgtgt cgtgccgtgc ttaagtaaaa ttgccccgaa
    22321 taccaataaa taccatatgg aagacgtaca ccgtgccggt gggattatgg gcttgctggg
    22381 cgaattagat cgtgcaggtt taatccatcg ccacgttaaa acagtgctag gtttaacgat
    22441 agaagagcaa ctgaatcaat acgatattat tcgtaataaa gatgaagatt tacacaaatt
    22501 cttccgtgca ggtccggcag gaattcgtac tactaaggct ttctcgcaag attgccgttg
    22561 ggacactgtt gatgatgacc gtgtaaacgg ctgtattcgc aatgtggaaa atgctgtgac
    22621 caaagagggc gggttagcgg tattatttgg gaatattgca gaagatggat gtattgttaa
    22681 aaccgcaggg gtagatgagt ctatttggaa attcactggc accgcaatcg tgtttgaaag
    22741 ccaagaagat gcggtagcag gtattttagg cggaaaagtg aaagaagggc atattgtgat
    22801 tatccgctat gaaggtccga aaggcggccc gggtatgcaa gaaatgcttt atccaactag
    22861 ttatttgaaa tcaatgggct taggcaaaaa atgtgcttta ttaactgacg gtcgtttctc
    22921 tggcggtacc tcagggttat ctatcggaca cgcttcaccg gaagccgctt caggaggagc
    22981 gattgcctta attaatgatg gcgatacggt ggcgattgat attccgaatc gttcgattaa
    23041 cttaatggtt tcagatgaag aacttgctgc tcgccgtgca gaaatggaag cccgtggcga
    23101 taaagcgtgg cagccgctaa aacgtgagcg agaagtgtcg tttgcactaa aagtgtttgg
    23161 acattttgcc acctctgctg ataaaggtgc ggtgagggat aaatcgctgt taaagtaaat
    23221 aaattagaaa aaagaagcat ttcaataata tattgatctg ctctttattc agctgaatat
    23281 ttaatctagc tgaatggaga gcagatcgat agcctaattt acatcttttt gttttgatac
    23341 agggaaatgt attacaagca ttttgccggt tttggcagac ctgcaatttt agtggcttgt
    23401 tttgcaggac catcaggaaa caagcgttgt aaataacggc tgttgccttt ttcttcaccg
    23461 aatttttgtg ccattgtctt taccagcatt cgaattgctg gtgaagtttt gtattcttgg
    23521 tagaaatccc gcaccagata aataatttcc caatgttctg cggttaagct aatttgctct
    23581 ttttcggcga ttttttctgc taattctaca gaccaatcat ttaaattagt taaatagcct
    23641 gaagcatcgg ttgggtattg gatattattt aattcaatcg tcatcaaata aaaatgccac
    23701 ataatgtggc attcctctta aactaaaacg ctagtcgtca ctacctagca caccgaagat
    23761 ttgtaagaag cttacaaata ggttgtagat agacacatat aaatcaacgg ttgcacgaat
    23821 gtagttggtt tcgccaccgt gaataatgtt gctggttgcc agtaaaatcg caccgcttga
    23881 gaaaatgaca aacaagctgc ttagggctaa acttaatgcc ggaattgcta agaagatatt
    23941 ggcaataata ccgactaata ataccacaaa cagggcaacc atcattccgc tgataaagct
    24001 catatctttt ttggtggtta atacataagc tgaacaagcg aagaaaacca atgcggttgc
    24061 accgaatgca agggcgacaa tatcccctaa acccgcaccg atgtaacggt ttaaaatagg
    24121 acctaaggta tagcctaaga agccggttaa agcaaatacg cttaagatac ccgcactgct
    24181 gtttgaggtg gcattcgtca agaaaagtaa gccgtaaaag ccgaccaata atccccacca
    24241 cggcatagcc ggtgcgttca tttgaattgc aacaaaagca acaactgcgg agaaagtcag
    24301 ggtcattgcc aataacatat aggtattgcg aagcactttg tgggtgctaa ttagagattc
    24361 accagttgaa tagctgtgag ctaaacgatt ttccataaaa attccttctg tttttgtgtt
    24421 taaatcggaa catccgatgg attaatatct atggataaat ttccataaat caagaagtaa
    24481 ggtagccgta atttattgta aagtcaatgc gattttgtaa cagaagagta aaaaaaaaca
    24541 tttagttgtg ttacacttaa taccactcta ctttatattc cttttcatcg atgaattcgc
    24601 tatgaagctc aatttcccaa cttatttaac cttatttcgg gtaggattaa ccccactttt
    24661 tattgtggct ttttatctgc cgacaaaata tgcgcctgaa atttcaacac ttattttttt
    24721 tattgcatcg attaccgatg cctttgacgg ctatttagca cgcaaatgga atcaaaccac
    24781 ccgacttggt gcatttttag atcctgttgc ggataaagtc ttggtagctg ttgcgtttgt
    24841 ctgcgtggcg gagtattacc atacttggtg gattactatt ccaatctgca ttatgattgc
    24901 ccgtgaaatt attatttcgg ctttgcgtga atggatggcg gagcttgggg aaagggccag
    24961 tgttgccgtt tcgatttggg ggaaagtaaa aacgactgct caaatgctcg cattaggtgg
    25021 aatgttatgg agacagaacc aactaatgga gattttagcc tttattctgc tttatattgc
    25081 agtgggttta acgatctggt ctatgatgca gtatttaaat gcttcaaaga atagtctatt
    25141 gaagtcataa gcggtcatat ttttattctt ttttgcaatt tgtagagtgg aaatatcgct
    25201 ctacaatttt caattttatc aactctaatg tctgaattta acgctaaatc cttcctgtta
    25261 aatgtgcctc accaaccggg tgtttatcgt atgtatgata gtaaaggcac gataatctat
    25321 gtgggtaaag ccaaagattt aaaaaagcgt ttagccagct attttcgtag ccaactttcc
    25381 agtaaaaaaa cggaagcctt ggtggcaaat cttgctaata ttgaaacgac gatcactcat
    25441 tctgaaacag aggcgttact ccttgaacat aattatatta aggaaaatca gccgaaatat
    25501 aatgtgttgc tcagagatga caaatcttat ccttatattc tgttaactaa acataagcat
    25561 cctcgtttaa cagcatttcg tggtagtaaa aagatcgccg gtgaatattt tgggccttat
    25621 ccgaatgtta cggcagttcg ggaaacactg aatttattgc aaaaaatttt tcctattcgt
    25681 cagtgtgaag atacttatta taaaaaccgt tcacgacctt gcttacagta tcagatcgga
    25741 cgctgtttag ccccttgtgt agagggctgt tattcacccg ttgaatacga tcagcaggtt
    25801 aatttggttc gtttgttttt acagggaaaa gatcaccaag tagtcgagca tctggtacag
    25861 aaaatggaag atgcggcgga ggctttggat tttgaaggtg cggcacgttt tcgggatcaa
    25921 attcaatcag taagagcggt gcaagaaaaa caattcgtct ctaatgatag gctagatgat
    25981 cttgatatta tctcgatcgt ttatcaaaat gggattgcct gtgtgcatat cttatttgtt
    26041 aggcaaggta aggtactagg caatcgttct tactttccaa aagtgccaag taatacagat
    26101 ttaaccgagc tcgcagatac ctttgtcggt cagttttatt tacaaatgaa ccagcaccgc
    26161 accataccta accaaattgt aattgatcat caattaagtg aatctaaggc actcagtgaa
    26221 attttaagtg agcaagcagg gcataaagtc agcattttag ataatgccat cagaggtgat
    26281 aaacagcgtt atttagcttt agcgagaact aatgcaatgg cagcattagt tttacaactt
    26341 aagcaagaat cccatattca aagccgttat caggcattga aagaaatgtt gaaaatgtca
    26401 gagattaaaa gaatggagtg ctttgacatc agtcatacaa tgggcaacca aacagtggct
    26461 tcttgcgtgg tgtttgatga aaatgggccg ctaaaatcgg attaccgccg ttttaacatt
    26521 gaggggatta ccggaggtga tgattatgca gcaatggagc aggctctctt gaaacgctat
    26581 aatcgagaat taccgccaga aaagatccct gatattattt ttattgatgg tggcaaaggg
    26641 cagttgaacc gagcgttaga tgtcttcgct aaacttgatg tggaatggga taaatcgaaa
    26701 ccgcttttaa ttggtgtggc aaaaggcgta gaacgtaaag ctgggctgga aactttaatt
    26761 atcagcaaat gggataaaga aattcactta ccgccagata gtcttgcctt gcatttaatt
    26821 cagcatattc gagatgaatc ccaccagcat gccattagtg ggcatcgtaa aaaacgccaa
    26881 aaggccttta ccgaaagtgg attagaatct attgccggtg tcggtgcaaa acgccgacaa
    26941 gcgttgctaa aatatttagg cggaatgcag ggggtgaagt ctgcaacctt ggaagagatt
    27001 caatcagttc cgggaatttc taaagcgttg gcagaggtta tttttgatac attaaaaaat
    27061 agttaaatta tcaatagcga tatcgcttcc agccgtaatg gtagcccact cctatgcttg
    27121 ggtaaattat agggtgaatt ggcagattta tgctttctga gcgtttatcg ctttggttta
    27181 atggctcatc atgttgcttt gtatttttat caacagtttg cttattgatt actcgttgat
    27241 ggtaatcctg aactgcttgc atatccattg gtactgtgct ttgttgttgg ggtgtcgaac
    27301 aggcggttag tgcaacgctc aatccgagta aaattaattt tttcatatca tttcctta
//
LOCUS       DANLXO010000022        26933 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.022, whole genome shotgun sequence.
ACCESSION   DANLXO010000022 DANLXO010000000
VERSION     DANLXO010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 26933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26933
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.022"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(88..162)
                     /locus_tag="PXD69_000796"
     tRNA            complement(88..162)
                     /locus_tag="PXD69_000796"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(128..130),aa:Gln,seq:ttg)
     gene            complement(188..272)
                     /locus_tag="PXD69_000797"
     tRNA            complement(188..272)
                     /locus_tag="PXD69_000797"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(236..238),aa:Leu,seq:tag)
     gene            complement(275..351)
                     /locus_tag="PXD69_000798"
     tRNA            complement(275..351)
                     /locus_tag="PXD69_000798"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(315..317),aa:Met,seq:cat)
     gene            complement(518..1342)
                     /gene="aroE"
                     /locus_tag="PXD69_000799"
     CDS             complement(518..1342)
                     /gene="aroE"
                     /locus_tag="PXD69_000799"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDL6283016.1"
                     /translation="MNRYAVWGNPIAQSKSPRIHQLFALQTQRNIEYIANLGDETAFE
                     QQLADFFASGAKGCNITAPFKERAFKLADEFSETALLAQACNTLKRLEDGRLYADNTD
                     GAGLVSDLERLGWLQKGHKTLILGAGGATKGVLLPLLKAGLEITLYNRTQEKAVVLAE
                     KFAKFGKIQTACLSDLANQLFNLIVNATSLGLQGKYVELPESVIASANIYDMQYAPNM
                     QTPFLNYARRCGATACQDGLGMLVGQAAFAFSLWEGQFPDVEPVLAQLKLEMQTVK"
     gene            complement(1349..1903)
                     /locus_tag="PXD69_000800"
     CDS             complement(1349..1903)
                     /locus_tag="PXD69_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HDL6283017.1"
                     /translation="MNNFLEIVNQLKQEEVVAYPTEAVFGLGCNPQSEKAVRKLLVLK
                     QRPEEKGLILLASDLKYLLPYIDEARMTEQAWQRLSHIGEQAITWIVPVKNTVPSYLT
                     GKFDSIAVRLCNVPAVVQLCEASGVALTSTSANLSGEPPCRNAKEVIDQFGQDFPVLH
                     ADTLGRENPSEIRDIFSQQIFRQG"
     gene            complement(1896..2432)
                     /locus_tag="PXD69_000801"
     CDS             complement(1896..2432)
                     /locus_tag="PXD69_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDL6283018.1"
                     /translation="MVLFKSTKQTETCPQCGSPLQIKQGKKGLFLGCSAYPECDYIKP
                     LHQAGHIIKQLDELCPECGGNLQLKQGNYGIFIGCSHYPECHFIVHEEAEVEEEFDCP
                     ECKQHKLIARKGRSGKIFYGCIGFPNCKFTLATRPINHLCEKCGCELATIKKIKGKQF
                     TICANKSCQHQTELKPNE"
     gene            complement(2442..2753)
                     /locus_tag="PXD69_000802"
     CDS             complement(2442..2753)
                     /locus_tag="PXD69_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDL6283019.1"
                     /translation="MNREKITFFSRFEADILSGKKTITIRDKSESYFQPNQELAVFTN
                     ETDRFFANIKVLSVTPIVFDELNEQHAKQENMSLAELKQVIREIYPNDNAFFVIEFTL
                     I"
     gene            complement(2746..3222)
                     /gene="recX"
                     /locus_tag="PXD69_000803"
     CDS             complement(2746..3222)
                     /gene="recX"
                     /locus_tag="PXD69_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDL6283020.1"
                     /translation="MTTSTTKTNKYTAVNYLLYLLSKRDYSEQELRQKLKQKEYELTE
                     IDAAIEKAQANQWQSDERFCTTFIRYRSMQGIGPRRLKQELKLKGVKDWLINQELENA
                     EVDWFELAEQIFEKKRPLVWDLKAKQKMWRFMVSRGFYNDHFSHLMALDYSSDEYE"
     gene            complement(3281..4387)
                     /gene="recA"
                     /locus_tag="PXD69_000804"
     CDS             complement(3281..4387)
                     /gene="recA"
                     /locus_tag="PXD69_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDL6283021.1"
                     /translation="MAEKKSQKNTPVKQIDPEQKEKALAAALAQIEKQFGKGSIMKLG
                     DTQALDIEAVSTGSLGLDSALGIGGLPMGRIVEIYGPESSGKTTLTLSVVAQAQKNGK
                     TCAFIDAEHALDPIYARKLGVDTDGLLISQPDNGEQALEICDALVRSGAVDVIIVDSV
                     AALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVIFINQIRMKIGVMFG
                     NPETTTGGNALKFYASVRLDIRRSGVVKDGDEVIGSETKVKIVKNKVAPPFREVQFDI
                     MYGEGIARMNELLILAESHGFINKAGAWFSYEGEKIGQGKNNAIKWLKEHPEVASKIE
                     QDIRNLLISNPTFTATPDSENADNADDEFSEEEL"
     gene            complement(4488..5108)
                     /locus_tag="PXD69_000805"
     CDS             complement(4488..5108)
                     /locus_tag="PXD69_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDL6283022.1"
                     /translation="MCRFPLFETLSIIDGKVQNLQYHQQRFEQATQEYFGCEPRFSLA
                     DILVVPEASQRGKVRCRIDYNATEFELKFFIYSPKKVERFRLVEVENWDYHLKFSDRK
                     RFDLLPILQNEEVIILNNGYVSDCSIGNLLFLKQGIWYSPQHYLLKGTQLSKLLDEGK
                     VVLAKIAKQDLHQYEKIMLINALNPFEEPRALPCSQIYFCDLDRKS"
     gene            complement(5086..6060)
                     /locus_tag="PXD69_000806"
     CDS             complement(5086..6060)
                     /locus_tag="PXD69_000806"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HDL6283023.1"
                     /translation="MQDFIHQANHYGQAKRPFFFLIDFEQQKPLIFPLEQAHASGLFF
                     EFFCKSNLEKPVEKPTKAFELSANPIPFSEYQTGFELVKKEIQAGNSYLLNLSYPTAI
                     ETNYSLAEIFAASKAKYKCYLQGRFVCFSPECFVRIENNRIFSYPMKGTINANEENAE
                     QKLMASEKEFTEHNTIVDLIRNDLALVAKNIEVTKYRYVEKVETHRGAILQTSSEICG
                     ELGENWQENIGSILAKLLPAGSISGAPKEKTVSIIQQAELGKRGYYTGIFGYFDGESL
                     ESAVAIRYIAQTSNGLVFHSGGGITSQSVLTDEYNELLEKVYVPISAI"
     gene            6170..7777
                     /gene="rmuC"
                     /locus_tag="PXD69_000807"
     CDS             6170..7777
                     /gene="rmuC"
                     /locus_tag="PXD69_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDL6283024.1"
                     /translation="MHFQEIGIYIALAVCVLVGVYLFFLKSRYQRNAYELSQDLGKIT
                     ENFEQIQQKYEVLAQEKNQLEQWAIQQQTKYEAVSERLNERDGQLQRFQQKIELAEQQ
                     ENQLERYINELKERVGSSQAKAESLEEQLQFSQSSLSTKERENQALFSRLNEVQNELT
                     ELRTTLSEKQANFEAQQRNFIEVKQQLNVEFQHLAQQILDEKSKRFSETNQSSLEALL
                     KPFKEQIEGFQKRVNEVHSESLKGSANLEAEIKRVLQIGVSMSEEAQNLATALKGNNK
                     IAGNWGEVQLESALQSAGLLAGEHYQAQESFRDEEGRRFAPDFVVHLPDQKHLIIDSK
                     VSLVAYDQAVRSEENFAISQALDEHCRSLRNHIEGLSKKNYSALLGIKSPDFVLMFIP
                     IEPAYIEAMKHDPQLFNFGYERNVILVSHTTLMPILRTVANLWRIERGNSEAREISEK
                     AGEIYNQVCAVADRLAKLGNTLNTANNQYNQTVTSLVGRQGLLGKVERFQHLSSKASQ
                     IVPQVELIENEVDTIKLEMVSRELLEE"
     gene            7840..8424
                     /locus_tag="PXD69_000808"
     CDS             7840..8424
                     /locus_tag="PXD69_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component II"
                     /protein_id="HDL6283025.1"
                     /translation="MLKKLLIIDNHDSFTFNLVDLLRKLDVPAKVVLVEELDLNEVEH
                     FSHILISPGPDVPRAYLQTFAMLERYHQTKSILGVCLGHQTICEFFGGKLYNLNDVRH
                     GQQRTLTQIEPNPIFKGLPKQLKVGLYHSWGILQNSLQNTPLVPTAVCDQNVLMAFKH
                     QHLPIFGVQFHPESFITEFGQQMLANWLEITQDF"
     gene            8521..9603
                     /gene="prfA"
                     /locus_tag="PXD69_000809"
     CDS             8521..9603
                     /gene="prfA"
                     /locus_tag="PXD69_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDL6283026.1"
                     /translation="MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQ
                     LEEVVGTFNRWKKLNNDIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLP
                     KDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYK
                     EIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEIN
                     PSDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLAS
                     RIVQVEQERQAAEQADTRRNLLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMN
                     GKIDELIQPIITEYQADQLAALSEQN"
     gene            9715..10317
                     /locus_tag="PXD69_000810"
     CDS             9715..10317
                     /locus_tag="PXD69_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283027.1"
                     /translation="MRKLGLLAVFTLVLSACSNSTKIEQTILSKQDIVGSWVCAIKYD
                     DLKVSTLDFSEFKANGEMTNFGDISDENFEPIKFTYVTGDKGKWDLKGNRLVIDYDLS
                     ERKVKRTTPKKFLEFLKQEERKASKTAKKLLKYEQGIFNILSDQKNTENSKIILDILK
                     FGHSRMAIQQNMGDKVYSGGCVTADKAEEYLDILKNRNSK"
     gene            10317..11183
                     /gene="prmC"
                     /locus_tag="PXD69_000811"
     CDS             10317..11183
                     /gene="prmC"
                     /locus_tag="PXD69_000811"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL6283028.1"
                     /translation="MDYREWLTFAEQKLLENSGADPYLNAKFDANLLLQAVTKRSKSA
                     IFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREFWSLPLKVSPATLIPRPDTE
                     RLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELGEKAQIIGVDFQNEAVQL
                     AEENRRNLGLNQVTFLQSDWFSSLANQQFDLIVSNPPYIDESDENLTVGDVRFEPLTA
                     LVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDLFDLHLWEQVETAQDY
                     AGNDRVTKAILK"
     gene            11192..12058
                     /locus_tag="PXD69_000812"
     CDS             11192..12058
                     /locus_tag="PXD69_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB1 family protein"
                     /protein_id="HDL6283029.1"
                     /translation="MDDIIEELLKELEDPKVTISETELKKFLYREILRLTTLIDKNVS
                     EQQVFGQMSALVKKARYNVNGEGDEERINQLLHLVYREWGFHCYYEDYFHTENLLLNQ
                     VIRKRRGMPVSLGAVALYLSAVLDLPLYPVNFPTQLVLRAEIHQPNGATKVRFINPWN
                     GEFLTIEMLNKWLEGEMGFGVEVTPDLLRRAEPQELLERVETVFKMALTREGKYEETL
                     RLIEYRLAFSPEDPYEIRDRGMVLASMDCYQAALEDINYFIDQCPEDPSAEILKMEVK
                     GLQQKSQESVVH"
     gene            12148..13002
                     /gene="kdsA"
                     /locus_tag="PXD69_000813"
     CDS             12148..13002
                     /gene="kdsA"
                     /locus_tag="PXD69_000813"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDL6283030.1"
                     /translation="MTDKIVKVGNIEVANHKPFTLFGGMNVLESRDMALRVCEQYVEV
                     TQKLNVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKQTFGVNIITDVHEIYQC
                     KPVAEVVDVIQLPAFLARQTDLVEAMARTGAVINVKKPQFLSPGQMGNIVEKIAECGN
                     DQVILCDRGTNFGYDNLVVDMLGFGIMKKVSKGCPVIFDVTHSLQCRDPFGAASGGRR
                     DQVTELARSGMAIGLAGLFLEAHPDPNSAKCDGPSALPLSKLEAFVSQMKAIDELVKS
                     FEEIDTSK"
     gene            13223..14170
                     /locus_tag="PXD69_000814"
     CDS             13223..14170
                     /locus_tag="PXD69_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HDL6283031.1"
                     /translation="MLNIVFLDRTGIPATHDIPRPNFPHTWTEYATTSADQTFERVKE
                     ADIIITSKVLLQRDLLAKLPKLKLIAITATGTNNVDLAAAKELGIAVKNVTGYSSVTV
                     PEHVIGMIYSLKHRLADYHRDLITSDRWATCGQFCYVDYPIHDVRGSTLGIFGKGNIG
                     AEVARLAQAVGMQVIFAEHQGATEIREGYTAFEEVFKQADIISLHCPLTEQTQNLINA
                     ETLALMKPTAYIINTGRGPLIDEQALLEALEQGKIAGAALDVLVKEPPEKDNPLMLAA
                     KRLPNLLITPHVAWASDSAVTTLVNKVTQNMEEFVATGM"
     gene            14268..15440
                     /locus_tag="PXD69_000815"
     CDS             14268..15440
                     /locus_tag="PXD69_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HDL6283032.1"
                     /translation="MNLTPFFIAFRYFRSKSADRFGRLVTNLASLGIVLGVMALVIVL
                     SVMNGLENMQKTNLLSTLPHAIITPQEGHFAKGEKLALPEFAKQSVVINRANVIIQSS
                     QGINAGQLIGVENATDDPLLVAENIPALLPSGEFKVVIGSRLANKLNVTVGDKLRLMI
                     TENSQYTPLGRVPVQRLFEISGVYQSNREASEFTLFANLADVGRLLRISEDQVQGVRL
                     YLQDPFQVTELSQYFDAERYQISDWREQKGEFFQAVKMEKNMMGLLISLIIVVAISNI
                     VTSLSLMVVDKQGEIAILQTQGLTKKQVMQIFVFQGAIVGVIGSIIGGLLGVLIAYNL
                     DQIILLLNPSIHLPTLISGTQIAVIVGVSMLLSLLCTLYPAYRASKIEPAQALRYE"
     gene            15457..16140
                     /gene="lolD"
                     /locus_tag="PXD69_000816"
     CDS             15457..16140
                     /gene="lolD"
                     /locus_tag="PXD69_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HDL6283033.1"
                     /translation="MTELLRCEHISKFYDEGEQKVQVLKEVSFSMNEGELVAIVGSSG
                     SGKSTLLHTLGGLDQPSTGEVWIRGQSLQQLSSDKLALLRNQNLGFVYQFHHLMADFT
                     ALENVMMPMLIGKQNKTEAANRAEKMLQAVGLAHRMTHRPSALSGGERQRVAIARALV
                     NNPALVLADEPTGNLDQKTTESIFELIQQLNQEQNIAFLLVTHDLNLANKLSRSLVMR
                     DGVLSEGSL"
     gene            16137..17402
                     /gene="lolE"
                     /locus_tag="PXD69_000817"
     CDS             16137..17402
                     /gene="lolE"
                     /locus_tag="PXD69_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HDL6283034.1"
                     /translation="MSTPFFISWRYQRGKQKNKLVSLIALFSNIGIALGVAVLIIGLS
                     AMNGFERELNNRVLSVVPHAELVSFQGNQPQPIFDSKKLEALIKKSQNVTASSPFVSF
                     TALIENGAQLKIAQVRGVDPKKQDQASQLSQFIPPEQWQAFNQQFQADEDGLILGAGI
                     AKALEVEAGDEVTLLIPQPTEDGKLAQPLRFNLNVTGILRLDGQLDHSYALIPLNKAQ
                     ELMEYQANEVSGLEISLANPFDVQQLEMPQLNGYTQPLYLNTWIDKFGYMYNDIQLIR
                     TVMYIAMVLVIGVACFNIISTLIMAVKDKQGDIAILRTLGANNGFIRRIFLWYGLISG
                     MKGALFGLILGVILSLNLTAIIKAIEAFFEVKLLSDGVYFVDFLPSELHWQDVVYVLA
                     ATIILSLFASLYPANRAAKLEPAKVLSGH"
     gene            complement(17477..19408)
                     /gene="thrS"
                     /locus_tag="PXD69_000818"
     CDS             complement(17477..19408)
                     /gene="thrS"
                     /locus_tag="PXD69_000818"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDL6283035.1"
                     /translation="MPIITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGER
                     RDASDIISQDSTLEIITAKDEDGLEIIRHSTAHLLGHSIKQLFPDVKMAIGPTIENGF
                     YYDIDLDRSLTQEDLDALEKRMLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAIL
                     DENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRI
                     YGTAWADKKQLAEYLQRLEEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRE
                     LETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNC
                     PGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IESEVISCIKMVYDIYSTFGFTNIAVKLSTRPENRIGDDAMWDRAEKGLANALRNNGL
                     EYEIQEGEGAFYGPKIEFALRDCLGREWQCGTVQLDFALPGRLAASYVAEDNGRRTPV
                     MIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAG
                     IRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDL
                     VEILKNQIKARELKLLGEE"
     gene            complement(19575..20924)
                     /locus_tag="PXD69_000819"
     CDS             complement(19575..20924)
                     /locus_tag="PXD69_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283036.1"
                     /translation="MNSTKFYSLYSGIFFLFFGYGLFLNSAGIKLAEMGITDIIIGLL
                     NAAFFIGAALSTIFAHRIVSSVGHIRSFSVFCAVFAIAALGHIMIDTLWIWGVLRIIL
                     GFCHYSLLLLVESWLSEKTNVDTRGKVLATYNIIFYLAFILGVSLLSLELSSRNIFIL
                     STILVVMSMIPIALTKMVQPDIPARERISIPKLFAISPLALATSFISGMLVNGFFTMA
                     SVFLLKFSFSLSEISLYLIISMIGGFISQMPMAILSNRIGRRNAILACSVIATLTALA
                     GLFAIFQENLTAWGQYIIAFFFGCSLFSLYALSIARANDELPNNMNTVEVSRGLLFCY
                     GVGALVAPPLIGFAMSLSAEYGFYALFGLFSLSLFICAFRTKSIPKAERAEMQYATPI
                     ATASPLEEIEVVEDALIPFDEEAVQEYQAQLEILEQDPQTENENIELDEGAAENSKV"
     gene            complement(21199..21690)
                     /locus_tag="PXD69_000820"
     CDS             complement(21199..21690)
                     /locus_tag="PXD69_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDL6283037.1"
                     /translation="MFTTQLIQTKRWLEANSITTFWLKTFIGATLLAIFAQISVPMYP
                     VPITGQTLALTVVGFAMGRKAATAAVLLYLFEGAIGLPVFAGGASGFHHFFGPTGGYL
                     LGYIPTAYFLGYYSDKGVLNSFWKSLFVALIASVITFAFGLAQLSLYQKAQYYKRAYI
                     HLF"
     gene            21771..22538
                     /locus_tag="PXD69_000821"
     CDS             21771..22538
                     /locus_tag="PXD69_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--protein ligase"
                     /protein_id="HDL6283038.1"
                     /translation="MVKPVYIYCDEGSSEIGVQSLLLAVKQHLQRPAYLINAKQIIQS
                     KFSDGCLLIMPGGADLPYCKKLNGEGNRRIRQFIEQGGAYLGICAGAYYGCAELNFVG
                     RDYSVNGNRELALFNGIAGIAKGSLPQFTNGQLYDKNIGSKAIVEVTLAEGGKMPFYY
                     HGGCCFEPNSTTVIYNPLAYYPDGSVAMIEGELGRGYYLLSGVHFELQAVVYWQKIVN
                     CCENLDIKTQEEAICSNFNVNYGSQIWQHLKQRLNQA"
     gene            complement(22529..23323)
                     /locus_tag="PXD69_000822"
     CDS             complement(22529..23323)
                     /locus_tag="PXD69_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDL6283039.1"
                     /translation="MRFFDTHTHLDYLAESLNLSIPELVENAKQHQVECILIVAVFAK
                     NFAKVTACAKQKPENLVYGLGLHPLYIQQHQQQDLILLENLLSQQDPQCTAIAEIGLE
                     KAVSEVSTPELWKKQCEFLEAQLSLAKKFNLPVNLHSRKSHDQLFVFLKKAQLTKTGV
                     VHGFAGSYEQAKRFVDLGYKIGVGGTITYERANKTREAIRKLPLESLLLETDSPDMPV
                     FGFQGQPNRPERLLVTFNSLCELRTESPNLIAETIWQNSERLFFYA"
     gene            complement(23384..24970)
                     /locus_tag="PXD69_000823"
     CDS             complement(23384..24970)
                     /locus_tag="PXD69_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005667512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDL6283040.1"
                     /translation="MLWFFFCVAVLVLGYFTYGKIIEKIFVINPKRATPAYAMNDGVD
                     YMPMSKTKIWLIQLLNIAGTGPIFGPILGALYGPVAMLWIVIGCIFAGAVHDYFCGML
                     SIRNGGATMPNLAGKFLGRPVKLFINVMALILLLLVGVVFVASPAQLLSTITMDIAGA
                     TQSAMELGDVEAIKESVASGGVTVWGMDKATVISVWTLIIFAYYILATLLPVDKIIGR
                     IYPFFGALLLFMSVGMVYGLVSAHLSATDPIDFFRTVNADGQGLTWEKFTQNFQVKGD
                     VPIWPLLFLTISCGALSGFHATQTPLMARCAQNEKEGRFIFYGAMITEGVIALVWCAV
                     GLSFYENPQALQDAISAGSPSKVVYDSSLHFLGFIGGIFAVLGVVVLPITSGDTAFRA
                     ARLQLAEIFGLEQRTLVKRLYIAVPLFVLGFIVSKVDFSVLWRYFTWANQMTAMVMLW
                     TAAGYLYRYKKFHWVCSIPAWFITTVCATYLANNKIGFGLDYELSVYIGFAITVVCVI
                     CFFAFLKPSEARDEDAYVTN"
     gene            complement(25156..>26933)
                     /gene="dxs"
                     /locus_tag="PXD69_000824"
     CDS             complement(25156..>26933)
                     /gene="dxs"
                     /locus_tag="PXD69_000824"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDL6283041.1"
                     /translation="TVVDELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQTPFDQ
                     LIWDVGHQAYPHKILTGRRDQMHTIRQKDGIHPFPWREESPYDVLSVGHSSTSISAGL
                     GIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENV
                     GALNNHLARIFSGSLYTSVRDGSKKILDKVPTIKNFMKKSEEHMKGVIFSPESTLFEE
                     LGFNYIGPIDGHNIDELVKTLSNMRELKGPQFLHIRTKKGKGYTPAENDPIGYHGVPK
                     FDPTAAELPKSKAAPTYSNIFGDWLCEMAERDPKIIGITPAMREGSGMVEFSKRFPEQ
                     YFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDR
                     AGIVGADGQTHQGAFDLSFMRCIPNMTIMAPSDENEMRKMLYTAYTMNTPSAIRYPRG
                     NAKGVKLEPMQRLEVGKGNIIREGKKVAILNFGALLDEAKIVAEKHNYTLVDMRFIKP
                     LDEALLQKVADSHELLVTLEENAIQGGAGSFVNEYLQNIGKIKPLVMLGIPDFFVPQS
                     TQAEAYADLGLDAQGIEAKIQKFDI"
BASE COUNT         8087 a         5511 c         5673 g         7662 t
ORIGIN      
        1 aaacccggtg ccttaccgct tggcgatacc ccaaaagaaa aaactaactt acgttagctt
       61 atatagattt gaatgtttga aattaagtgg ctggggtact aggattcgaa cctagggatg
      121 ccgagatcaa aacccggtgc cttaccgctt ggcgataccc caacactaat ttttgttaat
      181 cgataaatgg tgcgggacga gggacttgaa cccacacacc tcgcggcgcc agaacctaaa
      241 tctggtgcgt ctaccaattt cgccagtccc gcaatggtgg ctacagcgag attcgaactt
      301 gcgaccccaa cattatgagt gttgtgctct aaccagctga gctatgtagc catttgcgtt
      361 caccatatcg gtcaacggag tgcattatgc tgattttagg gctttccgtc aaatactttt
      421 tttaaaaaat ttgaattttt gattcgcttg tatagttatt cgtcgttttg gcttaaatct
      481 agcatttttt gtttataaaa taatagctta tattctgcta tttcaccgtt tgcatttcta
      541 attttaattg agccagtaca ggctcaacat cggggaattg cccttcccac aaagaaaacg
      601 caaacgctgc ctgtccaacc aacattccta atccgtcttg gcacgctgtt gctccacaac
      661 gccttgcata attgagaaaa ggagtttgca tattgggggc atattgcata tcgtaaatat
      721 tcgccgatgc tataacagat tcaggcaatt caacatattt gccttgcaga ccgagagagg
      781 tggcattgac gattaaatta aacagttggt ttgccaaatc gcttaaacaa gcggtctgaa
      841 ttttgccaaa ttttgcaaat ttttcggcta aaacgaccgc tttctcctgc gtgcggttat
      901 atagagtaat ctctaacccc gctttaagta acggaagtaa tacgcctttg gttgctccac
      961 ctgctccaag aattaaggtt ttatgccctt tttgtaacca acctagccgt tccaaatcag
     1021 aaactaaacc ggccccgtcg gtattatcgg catataaccg tccatcttct aagcgtttaa
     1081 gcgtattaca cgcctgtgcc aacaaagcgg tttcgctaaa ttcatctgcc aatttaaagg
     1141 ctctttcttt aaaaggggcg gtgatgttgc aaccttttgc tccagaagcg aaaaaatcgg
     1201 ctaattgttg ctcaaaagcc gtttcatctc ctaagttagc gatatattca atgttgcgtt
     1261 gggtttgtaa agcaaagagt tgatgaatac ggggggattt actttgagca atcgggttgc
     1321 cccacacggc atatcggttc atttcggctt atccttgtct aaaaatctgt tggctgaaaa
     1381 tatctcgaat ttcggaaggg ttttctctac ctagcgtgtc tgcgtgtaat acaggaaaat
     1441 cttgaccaaa ctgatcgatg acttcttttg cattgcggca aggtggttct ccgctcaaat
     1501 tggcactggt agaggtcaac gcaacgccgc ttgcctcaca caactgaacc accgccggca
     1561 cattacataa acgtacggca atagaatcaa atttgccggt gaggtaactt ggcacagtat
     1621 ttttaaccgg tacgatccaa gtaattgcct gctcgccaat atggcttagg cgttgccaag
     1681 cctgttccgt cattcgagct tcatcaatat agggaagaag atactttaaa tcagaagcca
     1741 gtaaaattag ccctttttcc tcagggcgtt gttttaatac gagtaatttc cttaccgctt
     1801 tttcactttg tggattgcag cctaagccaa aaaccgcttc ggttgggtaa gctacaactt
     1861 cttcttgctt taattgatta actatttcta aaaaattatt cattcggttt taattctgtt
     1921 tggtgctggc aacttttgtt agcacaaatg gtgaattgct tgcccttaat ttttttgatt
     1981 gtagcgagtt cacaaccaca tttttcacac aagtggttaa tcggtcgagt tgctaatgta
     2041 aatttgcaat tagggaagcc tatacaacca taaaatattt tgcctgaacg cccttttcta
     2101 gcaatcagtt tatgttgctt gcattcaggg caatcaaact cttcttcaac ctcagcttct
     2161 tcgtgtacga tgaagtggca ttcagggtaa tggctacagc cgataaaaat accataattg
     2221 ccttgtttta attggaggtt tccgccacat tcagggcaaa gttcatctaa ttgcttaata
     2281 atatgaccgg cttgatgtaa tggcttaata taatcacatt cagggtaagc tgaacaaccc
     2341 aaaaataacc cttttttgcc ctgcttaatt tgcaacggcg agccacattg tgggcaagtt
     2401 tcggtctgtt tggttgattt gaaaagtacc atattgattt gctaaataag cgtaaattca
     2461 atcacaaaaa acgcattgtc attcggataa atctcccgaa taacttgttt caattcggct
     2521 aagctcatat tttcttgttt agcgtgttgc tcgtttaatt catcaaacac tataggtgtt
     2581 accgatagca ctttaatatt ggcgaaaaat ctatcggttt cattagtaaa aaccgctaat
     2641 tcttggtttg gttgaaaata agattctgac ttgtctcgaa tcgtaattgt ttttttaccg
     2701 cttaaaatat cggcttcaaa tcggctgaaa aaggtaattt tctctctatt catattcatc
     2761 gctactgtaa tccagagcca ttaaatgact aaaatgatcg ttataaaaac cacggctaac
     2821 cataaatcgc cacattttct gctttgcttt cagatcccat acaagcggtc gttttttctc
     2881 aaaaatttgc tcagctaatt caaaccaatc cacttcggcg ttttctaatt cttggttaat
     2941 taaccaatct tttacccctt taagttttag ctcttgcttt aaacggcgag gcccaatgcc
     3001 ttgcattgaa cgataacgga taaaagtggt acaaaagcgt tcatcacttt gccactgatt
     3061 cgcttgagct ttttcaatcg ctgcatcaat ctccgtgagt tcatactctt tttgctttag
     3121 tttttgccga agctcttgct cgctgtaatc acgctttgaa agtaaatata gcagataatt
     3181 aaccgctgtg tatttatttg ttttagtagt agatgttgtc atttatcggt tataaataaa
     3241 aatgcgattt tcacgttgag cgaaaaccgc ataaatttaa ttagagttct tcttcactaa
     3301 attcatcatc tgcattgtct gcattttcag aatctggagt agccgtaaaa gttgggtttg
     3361 aaatgagtag atttcgaata tcttgctcaa ttttactcgc cacttcaggg tgttctttta
     3421 accatttgat ggcattattt ttaccctgac cgattttctc cccttcataa gagaaccaag
     3481 cccctgcttt attaatgaag ccgtgagatt ccgctaaaat gagtaattca ttcatacggg
     3541 caatgccctc accgtacata atatcaaatt ggacttcacg gaacggtgga gcaaccttgt
     3601 ttttcacaat tttcactttt gtttcgctac cgataacctc atcaccgtct tttactacgc
     3661 ctgaacgacg aatatctaaa cgtactgaag catagaattt aagggcatta ccaccagttg
     3721 tggtttcagg gttaccgaac attactccaa ttttcatacg aatttggtta atgaaaatca
     3781 ccaagcagtt ggtcgctttg atatttgcgg ttaatttacg caatgcttgt gacattaaac
     3841 gagcttgtaa gcccatatgg gaatcaccca tatcgccttc aatctctgct tttggtgtaa
     3901 gtgccgcaac agagtccaca ataattacat caaccgcacc ggaacgaact aacgcatcac
     3961 aaatttctaa tgcttgttcg ccattatccg gttgtgaaat taataatcca tctgtatcta
     4021 cccctaactt acgggcgtaa ataggatcaa gtgcgtgttc ggcatcaata aaggcacaag
     4081 ttttaccatt tttttgggct tgagccacca cagataaagt taatgtagtt ttacctgaag
     4141 actccggtcc ataaatttcc acaatacgac ccattggtaa accaccaatg cctaatgctg
     4201 agtctaaacc aagagaaccg gttgaaactg cttcaatatc aagggcttga gtatcgccta
     4261 acttcataat tgagcctttg ccaaattgct tttcaatttg agctaatgcg gctgccaacg
     4321 ctttttcttt ttgttccgga tcaatctgtt taaccggagt gttcttttga ctttttttct
     4381 ctgccatatt ctatcctttg taaactttta tctaaaagca accgcttgtt gctgcaaaat
     4441 aactgtatat tattatagta tttacttatc cagttgcaag cattttttta ggattttcga
     4501 tcaagatcac aaaaataaat ttgcgagcaa ggcaatgccc ttggttcctc aaagggatta
     4561 agagcattaa tcaacataat tttttcatat tgatgcaaat cttgcttggc tattttggct
     4621 aaaacgactt tcccttcatc aagcaattta ctaagctgag tgcctttgag caaataatgt
     4681 tgcgggctat accagattcc ttgttttagg aacagtaaat tgccgatgga gcaatcactg
     4741 acgtagccat tattgagaat aatcacctct tcattttgta aaatagggag caaatcaaac
     4801 cgcttgcggt cgctaaattt gaggtgataa tcccaatttt ccacctcaac caagcgaaaa
     4861 cgttctactt ttttgggcga atagataaaa aatttcagct caaattctgt tgcgttgtaa
     4921 tctattcggc aacgtacttt gccccgttga gaagcctctg gcacaactaa aatatcagca
     4981 aggctaaaac gaggttcaca gccaaaatat tcttgtgttg cttgctcaaa acgttgttga
     5041 tgatactgta agttctgaac tttgccgtca ataatcgaaa gggtttcaaa tagcggaaat
     5101 cggcacatag actttctcta acagttcatt atattcatca gttaacacac tttgtgaggt
     5161 aatgccacca ccactatgaa acacaagccc gtttgaggtt tgagcaatgt aacgaattgc
     5221 caccgcactt tctaagctct cgccatcaaa ataaccaaaa ataccggtgt agtaaccccg
     5281 ttttcctaat tctgcttgct gaataatcga aaccgttttc tctttcggtg caccgctaat
     5341 ggagccggca ggtagtaatt ttgccaatat cgaaccgata ttttcttgcc aattttcacc
     5401 taattcgcca cagatctcgg aacttgtctg caaaattgcc cctcgatggg tttctacttt
     5461 ttccacataa cggtatttag taacttcaat atttttcgcc accaacgcca agtcatttcg
     5521 gatcaaatcc acaatggtat tatgttcggt aaactctttt tccgaagcca ttaatttctg
     5581 ctcggcattc tcctcatttg cattaattgt gcctttcatc gggtaggaaa aaatgcggtt
     5641 attttcaatt cgcacaaagc attcagggga aaaacagacg aacctgcctt gcaaataaca
     5701 tttatatttt gctttgctgg cggcaaaaat ttccgccaat gaataattgg tttcaatggc
     5761 agtcgggtag ctcaaattca gcaagtagct attgccggct tgaatttcct ttttcactaa
     5821 ttcaaacccg gtttggtatt cgctaaacgg aatcggattt gccgataatt caaaagcttt
     5881 agtcggtttt tcaaccggct tttcgagatt cgatttgcaa aaaaattcaa aaaaaagacc
     5941 gcttgcgtga gcctgttcta gcggaaaaat aagtggcttt tgctgctcaa aatcaattaa
     6001 aaagaaaaaa gggcgttttg cttgcccgta gtgattggct tggtgaataa aatcttgcat
     6061 agaaaacaca atggctgaaa ttggctgaat catcaaaagc tctgttataa tgcaaagcaa
     6121 tagatttgaa aagcattttt taaaaaaggt tttaccgatg aacaacacca ttcattttca
     6181 agaaattggg atctacatcg cccttgccgt ttgtgtgctg gtaggcgttt atctcttttt
     6241 cttgaaatcc cgttatcagc gaaatgccta cgaattaagc caagatcttg gcaaaatcac
     6301 cgaaaatttt gaacaaattc agcaaaaata tgaggtgttg gctcaagaaa aaaatcagct
     6361 tgagcagtgg gcaattcaac aacagaccaa atatgaagca gtgagtgaac gtttaaacga
     6421 gcgagatggg caattgcaac gattccaaca aaaaatcgaa cttgccgaac agcaagaaaa
     6481 ccagctggaa cgctatatta atgagctaaa agaacgtgtg ggttcttccc aagcaaaggc
     6541 agaaagtttg gaagaacagc tacaatttag ccaaagttca ctctcaacta aagagcggga
     6601 aaatcaagcg ttatttagcc gtttaaacga ggtacaaaac gagctgaccg aactgcgtac
     6661 tacgctttcg gaaaaacagg caaattttga agcacaacaa cgcaatttta ttgaggtaaa
     6721 acaacagctt aatgtggaat ttcaacattt ggcacaacaa attcttgacg aaaaaagcaa
     6781 gcgttttagc gaaaccaatc aaagctcgtt agaagctcta ctgaagccgt tcaaagagca
     6841 aattgaaggc tttcaaaaac gggtgaatga ggtacatagt gagtcgctca aaggctcggc
     6901 aaatttagag gctgaaatta agcgggtgct acaaattggc gtttcaatgt cggaagaggc
     6961 acaaaatctg gcaacggcat taaaaggcaa taataaaatt gccggcaact ggggtgaagt
     7021 acagcttgaa agtgccttac aatctgccgg tttactcgca ggcgagcatt accaagccca
     7081 agagagtttt cgtgatgaag aggggcgacg ttttgccccc gattttgtgg tgcatttgcc
     7141 ggatcaaaaa catctgatta ttgacagtaa agtctcgtta gtagcgtacg atcaagcggt
     7201 cagatcagaa gaaaattttg caatttctca agccttagac gaacattgcc gttcgctacg
     7261 caatcatatt gagggattgt ctaagaagaa ctacagtgca ttattaggca ttaaaagccc
     7321 ggattttgta ctgatgttta ttccgataga accggcttat attgaagcga tgaagcacga
     7381 tccgcaactg tttaactttg gctatgaacg caatgtgatt ttggtttctc acaccacctt
     7441 aatgccgatt ttacgcacgg tcgccaattt atggcggatt gaacgaggca acagcgaggc
     7501 tcgtgaaatc agcgaaaaag ccggcgaaat ttacaaccaa gtgtgtgcgg ttgccgatcg
     7561 gttagctaaa ttaggtaaca cgctaaatac cgcaaataat caatacaatc aaaccgttac
     7621 ctcgttagtg ggacggcaag gcttactggg caaagtggaa cgattccaac atctttcaag
     7681 caaagcaagc caaattgtgc cgcaggttga gctgattgaa aatgaggtgg atactattaa
     7741 attggaaatg gtatcgagag aattattgga agaatagtca aatctcttta ttccctacaa
     7801 aaatatgggg tgatttgaaa tactaaagaa aataataaaa tgctaaaaaa actattaatc
     7861 atcgacaacc acgactcttt taccttcaac ttggtggatt tactccgtaa gcttgatgtg
     7921 ccggcgaaag tggtgctggt tgaagagctt gacctcaatg aggtggagca ttttagccat
     7981 attttgattt cgcccggccc tgatgtgccg agagcctatc tacaaacctt tgcgatgttg
     8041 gagcgttatc atcaaaccaa atcaattcta ggcgtttgct tggggcatca aacgatttgc
     8101 gagttttttg gcggcaagtt gtataaccta aacgatgtta gacacgggca gcaacgcacg
     8161 ctcactcaaa ttgagcctaa ccccatattt aaaggtttgc ctaagcagtt gaaagttggg
     8221 ttgtatcact cttggggcat tttgcaaaat tcgttgcaaa atacaccgct tgtaccaacc
     8281 gcagtttgcg atcaaaatgt gttaatggcg tttaaacacc aacatttgcc gatttttggc
     8341 gtgcagtttc acccggaatc ttttatcact gaatttggtc aacaaatgtt ggcaaattgg
     8401 cttgagatta cacaagattt ttagcgtgaa atccgctata atccgtcagt tatttaccct
     8461 tttaaaatct gtaggggcga aaaatttttc gccttactta atatgcaaga gataatttaa
     8521 atgaaagatt cgattatcaa taaattagaa agtttaagtg aacgccacga agaactacag
     8581 gcgttacttg gcgatgcctc aattatttcc gatcaagaca aattccgtgc ttattccaaa
     8641 gaatattcgc aattagaaga agtggttggc acctttaacc gctggaaaaa gctgaacaat
     8701 gatattgaag aggctcaatt attactcgat gatcctgata tgaaggatat ggcagcggaa
     8761 gaaattgcgg aaaataaagc cgaaatcgag aatcttgagc aacatttaca aattttatta
     8821 ttgccgaaag atccgaatga tgaatacaac gccttccttg aaatccgtgc cggaacgggc
     8881 ggtgacgagg ctggtatttt tgccggtgat ttataccgta tgtacagccg ttattgcgaa
     8941 agtaaacgct ggcgaattga agaaatgtcg gcaaatgaga gtgaacaagg cggatataaa
     9001 gagatcatcg ttaaaatttc aggcgaaggc gtttacggtc agcttaaatt tgaatcgggc
     9061 ggacaccgtg tacaacgtgt accgaaaacc gaatcacaag ggcgtattca cacctctgct
     9121 tgcacggtag cggtaatgcc ggagttgccg gaaagcgaga tgccggaaat caatccatct
     9181 gatctgcgaa ttgacaccta ccgctcatcg ggtgcaggcg gtcagcacgt taataccacc
     9241 gactctgcag tgcggattac tcatatcccg accgggattg tggtcgagtg tcaagatgag
     9301 cgttcacagc acaaaaataa agccaaagcg ctggcagtgt tagcctctcg gattgtacaa
     9361 gttgagcaag aacgccaagc cgcagagcaa gcggataccc gccgtaactt acttggctca
     9421 ggcgaccgtt cggataaaat ccgcacctac aactacccgc aagggcgtgt gactgatcac
     9481 cgtattaacc tcacggttta tcgtttagac gaagtgatga acggcaaaat tgatgaattg
     9541 atacaaccga ttatcactga atatcaagcg gatcagttag cggcgttgtc ggagcaaaat
     9601 taattttatt gtaagggtac actgtgtgtg cctgccaaat ataaatttgc aaaattttga
     9661 ctatttttga tcgcttgtag tttctaaaaa gtttaaaaat ttgaggaaaa caaaatgaga
     9721 aagttaggtt tattagcagt atttacttta gtattatcag cctgttcaaa ttcaacaaaa
     9781 attgaacaaa ccattctttc caagcaggat atcgtaggct cttgggtatg cgctattaaa
     9841 tacgatgatc taaaagtaag cactttagat ttttctgaat ttaaagctaa tggcgaaatg
     9901 acgaatttcg gtgatatttc tgatgagaat tttgagccca ttaaatttac ttatgtaaca
     9961 ggagataaag ggaagtggga cttaaaagga aatcgattag tgattgatta tgatctttct
    10021 gaacgtaaag taaaaagaac aacaccaaaa aaatttttag agttcttgaa acaggaagag
    10081 cgtaaagcct caaaaacagc taaaaaactc cttaaatatg aacaagggat tttcaatatt
    10141 ctgagtgatc agaaaaatac tgaaaacagt aaaataatat tagatatttt gaagtttggt
    10201 cattcaagaa tggcgattca gcaaaatatg ggagacaaag tttattcagg tggttgtgta
    10261 acagctgata aagcagaaga gtatttagat atcctaaaaa atagaaattc taaataatgg
    10321 attaccgaga gtggctcact tttgctgagc aaaaattact tgaaaatagc ggggcagatc
    10381 catacctaaa cgcaaaattt gatgcaaatt tgctattgca agcagtcaca aaacgttcaa
    10441 aatcggccat ttttgctttt tcggaaaccc tactttctga aagcgagctt gcagaattag
    10501 cggaaaaatt agctcggcgt gccaaaggtg aaccaatggc atatatttta ggctatcggg
    10561 aattttggtc gttgccgtta aaggtttcac cggcaacgct gattcctcgc cctgatacgg
    10621 aacgactggt tgagttggcg ttggaatatg ctaacaagcg gttaggaaat cagaaaatgt
    10681 tgcaaattct ggatctcggt accggcacgg gggcgattgc gttggcactg gcgagtgaat
    10741 taggcgagaa agcccaaatt atcggggtgg atttccaaaa tgaggcggtg caactggcag
    10801 aagaaaatcg ccgaaactta ggcttaaatc aagttacatt tttacaaagc gattggttca
    10861 gttcgcttgc aaatcaacaa tttgatttaa ttgtctcaaa tccgccttat attgatgaat
    10921 cggacgaaaa tttgacggtg ggagacgtac gttttgaacc tttaaccgca ttagttgccg
    10981 ataataaggg gttgagcgat ttgcaaaaaa tcatcgaaaa tgcaccgctt cacttaaaac
    11041 cgcaaggggc gttaatgctg gaacacggct ggaaacaagg taacttggtt cgagatttat
    11101 ttgatttaca cttgtgggaa caggtagaaa ctgctcaaga ttatgccggc aatgaccgag
    11161 taaccaaagc gattttaaaa taaggcagaa aatggacgat attattgaag aattgttaaa
    11221 agagttggaa gatccgaaag taaccatcag cgaaaccgag ctgaaaaagt ttctttatcg
    11281 tgaaatttta cgattaacta cgctcattga taagaatgta agtgagcaac aagtgtttgg
    11341 tcagatgtct gcgttggtga aaaaagctcg ctataacgtg aatggcgaag gcgatgaaga
    11401 gagaattaac caattacttc atttagtcta tcgtgaatgg ggctttcatt gctactatga
    11461 agactatttc cacaccgaaa atttgttgct aaatcaagta attcgcaaac ggcgtggaat
    11521 gccggtttca cttggggcgg tggcgcttta tttatccgcc gtattggatt tgccgcttta
    11581 cccggttaat tttccgactc agcttgtgtt acgggctgaa atacaccagc cgaacggggc
    11641 aaccaaagtg cgttttatca acccgtggaa cggtgaattt ctcaccatcg aaatgctgaa
    11701 taaatggctg gaaggagaaa tgggctttgg cgtagaagtt acccctgatt tgttaagacg
    11761 agcagaacca caagagttgc tggaaagggt cgaaactgtg tttaaaatgg cacttacccg
    11821 tgaaggcaaa tatgaagaaa ccttacgctt gattgaatac cgcttggcat ttagcccgga
    11881 agatccgtac gaaatcagag accgaggaat ggtactggca agtatggatt gctaccaagc
    11941 agcattagaa gatattaatt atttcattga ccaatgccct gaagatcctt ctgccgaaat
    12001 tttaaaaatg gaagtgaaag gactgcaaca aaaaagccaa gaaagtgtgg tgcattaagc
    12061 tgagaagtag ccccaaaggg gctgagctat gattaaccta gtacggctct gccgtgctag
    12121 gcagaaaata agaaacaagg actccctatg acagataaaa ttgtaaaagt tggcaatatt
    12181 gaagtggcta atcacaaacc gtttacgctt tttggtggta tgaatgtgct ggaaagccgt
    12241 gatatggcac ttagagtatg tgagcaatat gttgaagtca cgcaaaaact aaatgtgcct
    12301 tatgtgttca aagcctcatt tgacaaagca aaccgttctt caatccactc ttaccgtgga
    12361 ccgggaatgg aagaaggctt aaagattttc caagaattaa aacaaacctt tggcgtgaac
    12421 atcattaccg atgttcacga aatttaccaa tgtaaacctg tggcagaagt agttgatgtg
    12481 attcaactac cagcattttt ggctcgccaa accgatttag tggaagcaat ggctcgtacc
    12541 ggtgcggtta ttaacgttaa aaagccgcaa tttttaagcc cgggtcaaat ggggaatatc
    12601 gtagaaaaga ttgctgaatg cggcaacgat caagtgattt tgtgcgaccg tggcactaac
    12661 tttggctacg ataatctagt tgtggatatg cttggtttcg gcattatgaa aaaagtgtcg
    12721 aaaggttgcc cggtgatttt tgatgtgact cactcattac aatgccgtga tccattcggt
    12781 gcggcttccg gtggtcgcag agatcaagta accgaactgg cacgctccgg tatggcgatt
    12841 ggtttagccg gcttgttctt agaagctcac ccggatccaa actcggcgaa atgtgatggt
    12901 ccatctgcat taccgctgtc aaaattagaa gcctttgttt cacagatgaa agcgattgat
    12961 gagttggtta agagctttga agaaattgat acttccaaat aaactttctc cgcattaaat
    13021 cctttcctac tttctttgct tcgccaaaga aagtaggcaa agaaaggcga ccctacttcg
    13081 ctacttttct tcgcttagtg tgaatgggct taacgaaaaa tttacattcg cttcgctcag
    13141 agtaaatttt cctacccatt aaaacacgct caggtagctc agaagggagt tagaaaggta
    13201 aaagacagaa taggagaaaa aaatgctaaa tattgttttt cttgaccgta ccggtattcc
    13261 tgccactcac gatattcctc gtccgaattt tccacatact tggacggaat atgccaccac
    13321 ctctgccgat caaacttttg agcgggtaaa agaagcggat attatcatta ccagcaaagt
    13381 gttactccag cgtgacttgc tggctaaatt accaaagctg aaattaattg cgatcacagc
    13441 aaccggcacg aacaatgtgg acttagcggc agcaaaagag ttagggattg cagtgaaaaa
    13501 tgtaaccggc tattccagcg ttaccgtgcc ggaacacgtc attggtatga tttactccct
    13561 gaaacatcgt ttagccgatt atcaccgtga tttaattacg tctgaccgct gggcaacttg
    13621 cggccaattt tgctatgtag attacccgat ccacgatgtg cgaggctcaa ccttaggcat
    13681 tttcggtaaa gggaacatcg gggctgaagt ggcacggctg gcacaagcgg tcggaatgca
    13741 ggttattttt gcagaacatc aaggcgcaac tgaaattcga gaaggctaca ccgcctttga
    13801 agaggtattc aaacaagcag atattatttc actacactgc cctttaaccg agcagactca
    13861 aaacctgatt aatgcagaaa ccttagcctt aatgaagccg accgcttata ttatcaatac
    13921 gggtcgaggc ccactgattg atgaacaggc attgcttgag gcattagagc aaggcaagat
    13981 tgccggcgct gcgttagatg ttttagtgaa agagccgcct gaaaaagaca accctttaat
    14041 gttagccgca aaacgtttac cgaatttact gattacccca cacgttgcgt gggcaagcga
    14101 ttctgcggtt acaacactag tgaataaagt gacacaaaat atggaagagt ttgtagcaac
    14161 gggtatgtag cttgaagtag gggctggtcc tgtgccagcc ctaatattaa tagaatgaga
    14221 gggcgggtat aaaacccgcc cctaccaata tcattttaga aaaacagatg aatttaaccc
    14281 ctttttttat tgcttttcgc tattttagat cgaaaagtgc tgaccgtttc gggcggttag
    14341 tcaccaatct tgccagcctt ggcattgtgc tgggcgtaat ggcattggtg attgtgctgt
    14401 cggttatgaa cggtttggaa aatatgcaga aaaccaatct gctatccacc ttgccgcacg
    14461 ctatcatcac ccctcaagag gggcattttg ccaaaggtga aaaactggct ctacctgaat
    14521 ttgccaagca aagtgtggtg attaaccgtg cgaatgtgat tatccaaagt tcacaaggca
    14581 ttaacgccgg tcagttaatc ggcgtggaaa atgccacaga cgatccgttg ttagtggcgg
    14641 aaaatatccc cgcattattg cctagcggtg aatttaaggt agtaattggc tctcgtttag
    14701 ccaataaatt gaacgttacg gtaggcgata agctccgctt aatgatcact gaaaacagcc
    14761 aatatacgcc acttgggcga gtgccggtac agcgtttgtt tgaaatttcg ggcgtttatc
    14821 aatctaatcg tgaagcgagc gaatttaccc tctttgctaa tttagctgat gtcgggcgtt
    14881 tgcttcgcat cagcgaagat caagtacaag gcgtgcgttt atatttgcaa gatcctttcc
    14941 aagttaccga acttagccaa tatttcgatg cagaacgcta ccaaatcagt gattggcgtg
    15001 agcaaaaagg cgaatttttc caagcggtga aaatggaaaa aaatatgatg ggcttactca
    15061 tcagcctgat tattgtggtt gcaatttcca acattgtgac ttcactcagt ttgatggtgg
    15121 tagacaaaca gggcgaaatt gcaattttac aaacccaagg cttaaccaaa aaacaagtga
    15181 tgcagatttt tgtgttccaa ggggcgattg tcggagtaat tggctcgatt attggtggtt
    15241 tgctcggcgt attgatcgcc tacaatttag atcagattat cctgctatta aacccgagca
    15301 tccatctgcc taccctaatt tcaggcacgc aaattgcggt cattgtaggg gtgtcgatgt
    15361 tgctttcact cctttgcacg ctttacccgg cataccgagc ctcaaaaatt gagccggcac
    15421 aggcattgag atatgaataa taagaacgga aataaaatga cagaattact tcgctgtgaa
    15481 catatcagca aattttacga tgagggcgaa cagaaagttc aggtgctaaa agaggtgtca
    15541 ttttcgatga acgaaggtga gctggtagcg attgtcggta gttcaggttc cggcaaaagc
    15601 accctattgc acacattagg cgggctagat cagccaagca ccggtgaagt ctggattcga
    15661 gggcaatctc tgcaacagct cagttcagac aaattagcgt tattgcgtaa ccaaaactta
    15721 ggctttgtgt accaatttca tcacttaatg gcagacttta ccgcccttga aaatgtgatg
    15781 atgccgatgc tgatcggcaa acagaacaaa actgaagctg ccaatcgtgc cgagaaaatg
    15841 ctacaagcgg tcggattagc tcatcgaatg acacatcgcc catcagcact ttcaggcggc
    15901 gaacgccaac gggtggcgat tgcccgagcg ttggttaata atccggctct ggtacttgcc
    15961 gatgaaccga ccggtaattt agaccaaaaa accactgaaa gcatttttga gctgattcaa
    16021 cagctcaacc aagagcagaa cattgcgttt ttattagtaa cgcatgattt aaatctagcg
    16081 aataaacttt cacgtagtct tgtaatgcga gatggcgtgt taagcgaggg gagcttatga
    16141 gtacgccgtt tttcattagc tggcgttacc aacggggcaa acagaaaaac aaactggttt
    16201 cactgattgc tctcttttcc aacatcggta ttgcccttgg ggttgcggta ttaattatcg
    16261 ggctaagtgc aatgaacggc tttgagcgag agctgaataa tcgtgtgctt tcggttgtgc
    16321 cacacgctga actggtttcg tttcaaggca atcagcctca accaattttt gatagcaaaa
    16381 aattagaggc attgataaaa aaatcgcaaa atgtgaccgc tagttcgcct tttgtcagct
    16441 ttaccgcctt aattgaaaat ggggctcagc ttaaaatcgc ccaggtgcga ggggttgatc
    16501 ctaaaaagca agatcaggcc agccaattaa gccaatttat tccacccgag caatggcaag
    16561 cgttcaatca gcaatttcaa gccgatgaag atggcttgat tttaggagcc ggtattgcca
    16621 aagcgttaga agttgaggca ggagacgaag ttacgctttt aattcctcag ccaacagaag
    16681 acggcaaatt agcccagccc ttgcgtttta acctaaacgt aaccggcatt ttgcggctag
    16741 atgggcagct ggatcacagt tatgccttaa ttccactgaa taaagctcaa gagctgatgg
    16801 aataccaagc gaatgaagtg tcagggcttg aaatcagcct tgccaatccg tttgatgtac
    16861 aacagcttga aatgccacaa cttaacggct atacccaacc gctttatttg aatacgtgga
    16921 ttgataaatt cggttatatg tataacgata ttcaactgat tcgcaccgtg atgtacattg
    16981 caatggttct cgtgattggc gttgcctgtt ttaatattat ttccaccttg attatggcag
    17041 tgaaagacaa acaaggcgat atcgcgattt tacggacact gggggcaaat aacggtttta
    17101 tccgccgcat tttcttatgg tatggcttaa tttcaggtat gaaaggggcg ttattcgggc
    17161 tgattttagg tgtaatttta tcgctaaatt taaccgctat tatcaaagcg attgaagcat
    17221 tctttgaggt gaaattgctt tcagacgggg tttattttgt tgatttctta ccaagtgaat
    17281 tacattggca agatgtcgtc tatgtattgg cagccacgat tatcctaagc ctttttgcca
    17341 gcttataccc tgccaaccga gccgctaaat tagaaccggc aaaagtgtta agtgggcatt
    17401 aatcattttc ctattctaat aaaaaagcag ctacccctcg attatgtcag aaaggtagct
    17461 gcttttattt atgttattac tcttcgccta ataatttcaa ctcacgagcc ttaatttggt
    17521 tttttagaat ttcaactaag tctgaaacga ggtaagtacc taagtctgca cctttacggg
    17581 tacgcacaga cactttacct tcggcgattt ctttatcacc gcaaaccaac atataaggca
    17641 cacggcgtaa ggtgtgctca cgcactttga agccgacttt ttcgttgcgt aagtctgctt
    17701 tcacacgaat gcctgcatca gaaagctgtt tcaccacttg ttgcacataa tctgcttggc
    17761 tgtcggtaat gttcattacc actgcttggg ttggggcaag ccaagttggg aagaaaccgg
    17821 catattcttc ggtgataatc ccgatgaaac gttcgatcga gcctaaaatc gcacggtgaa
    17881 tcattaccgg tgtgcggcga ccattatctt ctgctacata agaggctgct aaacgacccg
    17941 gtagagcgaa gtcaagttgc actgtgccac attgccattc acgtcctaag caatcacgca
    18001 atgcaaactc aattttcggc ccgtagaatg caccttcgcc ttcttgaatt tcatattcaa
    18061 gtccgttgtt gcgtaaggcg ttggctaagc ctttttctgc tctgtcccac attgcatcat
    18121 caccgatacg gttttccgga cgggttgaaa gttttactgc aatgttagta aaaccgaagg
    18181 tgctgtaaat gtcgtacacc attttgatac agctgattac ttctgactcg atttgttctt
    18241 cagtacagaa aatatgggca tcatcttggg taaaaccacg cacacgcatt aagccgtgta
    18301 atgaaccgga cggctcgtta cggtgacacg aaccaaattc cgccatacgg atcggtaaat
    18361 cacggtaaga tttcaagcct tgattaaaga tttgaacgtg acccgggcag ttcatcggct
    18421 taattgcata ttcacggttt tccgattggg tagtgaacat taaatctgcg tagttttgcc
    18481 agtgtccggt tttttcccaa agcacacgat ccatcataaa cggacctttt acttcttggt
    18541 aatcgtactc tttcaatttg gtacgcacaa aagtttcaag ttcacggaaa atcgtccagc
    18601 cgtcattgtg ccagaacacc atacccggtg cttcttcttg catatggtat aaatctaacg
    18661 ctttaccgat acggcggtgg tcacgttttg ccgcttcttc caaacgttgt aaatattcgg
    18721 ctaattgttt tttatcagcc caagctgtac cgtaaatacg ttgtagcatt ttatttttgc
    18781 tgtcgccacg ccagtaagca cccgctactt tttgtaattt gaagtggtgg cagaaacgca
    18841 tatttggtac gtgtggacca cggcacatat caatatattc ttcgtggtga tataacgcag
    18901 gcgttgccgt acgttcaata ttttcatcta aaatcgccat tttgtatggc tcaccacgtt
    18961 tctcaaaggt atctcgagct tcttgccagc ttaccgggcg ttttaccacg tcatagttgg
    19021 tttttgccag ctctaacata cgcttttcaa gagcgtctaa atcttcttga gtcaaagagc
    19081 ggtctaaatc gatatcgtag tagaaaccgt tttcgatagt cgggccgata gccattttaa
    19141 cgtctgggaa taattgcttg atggagtgac ctaacaagtg agcggttgag tggcgaatga
    19201 tctctaaacc atcttcgtct ttggcagtaa tgatttcaag tgtgctgtct tggctgatga
    19261 tatcagacgc atcacggcgt tcaccgttta cacgaccggc aatggtggct ttcgctaaac
    19321 ctgccccgat agattgggca acttccatta cagaaactgg gttgtcaaat gaacgttgtg
    19381 aaccgtccgg taaagtaata attggcataa taaatcctta cagtggtaat ccatacgaga
    19441 gattacttgt gttgtttgaa tgaaaaaacc gcctacaagc ggtctttttt gattaaaatt
    19501 ttgcaatttg cttattattt cccttacaag tggggaataa aagcactgaa attctagcat
    19561 aaaacaaaga aaaattaaac tttgctgttt tcagcggccc cttcatcaag ctcaatattt
    19621 tcattttctg tttgtggatc ttgttcaagt atttcaagct gagcctggta ctcttgtacc
    19681 gcttcttcat caaatggaat aagtgcgtcc tcaacaactt caatttcttc aagtgggctt
    19741 gcggttgcaa ttggggtagc atattgcatc tctgctcgtt ccgctttcgg aattgatttg
    19801 gtgcggaaag cacaaataaa taaactaagt gagaacagtc caaaaagtgc ataaaagcca
    19861 tattcagcgg aaaggctcat cgcaaaaccg ataagcggtg gagcaactaa cgcccccaca
    19921 ccatagcaaa acagtaaacc cctgcttact tcaaccgtgt tcatattatt cggcaattca
    19981 tcgttggcac gggcaatgct caaagcatat aagctaaaca gactacagcc aaagaaaaag
    20041 gcgataatat actgtcccca ggcggtcaaa ttttcttgga aaattgcaaa taatccggca
    20101 agtgcggtta aagtggcaat cactgaacaa gctaaaatgg cgttacgtct gccaatacga
    20161 ttcgataata tcgccatcgg catttggctg ataaaaccac cgatcatcga gataatcaaa
    20221 taaagcgaga tttcacttaa tgaaaagcta aacttcagca gaaagactga cgccattgta
    20281 aaaaagccgt ttaccaacat tccgctaata aagctggttg ctaaggctaa cggtgaaatc
    20341 gcaaatagtt taggaatact aatgcgctct cgagccggaa tatcaggctg aaccatttta
    20401 gttaaagcaa ttgggatcat cgacatcaca accaaaatgg tagataagat aaaaatgttt
    20461 cggctactaa gttctaaact taataaactt acgcctaaaa taaaggcgag atagaagata
    20521 atgttataag tggcaagcac tttgcctctg gtatcgacat tggttttttc gcttaaccaa
    20581 ctttcgacta aaagcagcaa gctataatga cagaatccca aaataattcg taacacgccc
    20641 cagatccaca aagtatcaat cataatatga ccgagagcgg cgatagcaaa aacagcacag
    20701 aaaacgctaa atgaacggat atgcccaaca cttgatacaa tgcggtgagc aaaaatagtg
    20761 cttaatgccg ccccaataaa gaaagcagcg ttaagtaaac cgatgatgat gtccgttatc
    20821 cccatttctg ccagtttgat ccctgctgaa tttagaaata aaccgtagcc gaaaaacaga
    20881 aaaaagatac ctgaataaag ggagtaaaat ttagtgctat tcatcaatgc tccttcaaac
    20941 attctgccag tattaaatca ttgtaccgat ttaatacctt ttaggcaaaa aagttattat
    21001 tagcgttgag aaaataactt ttggctattt tgattaaaaa atcaaatgaa ggtgattttg
    21061 aaatgtagta aaaaatagag caatcagaat tgaaaaaggg tttgccgtaa caaagccttt
    21121 agaaagatta gagtttcgag aagaatttgt agcttgggct aaccaaaaca cttgctagga
    21181 gtgctttaag cacaccacct aaaataaatg gatataagcc cgcttgtaat actgtgcctt
    21241 ctggtacaaa gaaagttgag ccaagccgaa agcaaaggtg atcacacttg caattaaggc
    21301 gacaaataaa cttttccaaa aagagtttaa tacgccttta tcgctataat agcctaagaa
    21361 ataggcggtt ggaatatagc ctaataagta tccgcctgtt ggaccaaaga aatgatggaa
    21421 acctgaagca ccgccggcaa agacaggtaa accaatcgcc ccttcaaaaa gataaagtaa
    21481 tactgcagca gttgcggctt tacgacccat tgcaaaacca accacagtta aagcaagtgt
    21541 ttgccctgta atgggtacag ggtacatcgg cacagaaatt tgtgcaaaaa tagcaagcag
    21601 tgttgctcca ataaaagttt tcaaccaaaa tgtagttata ctattggctt ctagccaacg
    21661 tttagtttga attaattgcg tagtgaacat aatcctctcc tttaatatgg ttaaaatgtt
    21721 ctcaaccgat tatataagaa gatgtctttt agggtaagag tgaatttaaa atggtaaaac
    21781 cagtttatat ttattgtgat gaaggtagca gtgaaattgg tgttcaatca ctgttattgg
    21841 cagtaaaaca gcatttacag cgtccggctt atctcatcaa tgccaaacaa attattcaaa
    21901 gcaagttttc cgatggctgt ttattaatca tgcccggtgg agccgattta ccttactgca
    21961 aaaaattaaa cggagaaggc aatcgtagaa tccgccaatt tattgaacaa ggtggagctt
    22021 atctcggtat ctgtgccgga gcttattatg gctgtgctga attgaatttt gtagggcgtg
    22081 actatagcgt aaatggtaat cgagaactag ctttatttaa tggcattgcg ggcattgcga
    22141 aaggcagtct gccgcagttt accaacgggc aactttacga taaaaacatt ggtagcaaag
    22201 cgatagttga agtaacactt gcagagggtg gaaaaatgcc gttttattat cacggtggtt
    22261 gctgttttga accaaattca acaacagtga tttacaaccc gttggcttat tatcctgatg
    22321 gctcagtagc aatgatagag ggagagctag ggcgaggtta ctatctgttg tcgggtgtac
    22381 attttgaatt acaagcggtc gtttattggc aaaaaattgt aaattgctgt gaaaatcttg
    22441 acataaaaac acaagaagaa gcaatttgct ctaattttaa tgtaaattat ggctcgcaaa
    22501 tttggcaaca tctaaagcaa cgactaaatc aagcgtaaaa aaataacctt tcgctattct
    22561 gccaaatggt ttctgcaatc agatttggtg attctgttct taattcacat agactattga
    22621 aagtcactaa aagccgttcc ggtcggttcg gctggccttg aaagccaaac accggcatat
    22681 cgggcgagtc ggtttccagt agtaaacttt caagaggtag tttgcggata gcctcacggg
    22741 ttttgttagc acgttcatag gtaatagttc cccccacacc aattttataa ccgagatcga
    22801 caaaacgttt tgcctgttca tagctgccgg caaagccgtg aaccacaccg gttttggtta
    22861 gttgggcttt tttgaggaac acaaaaagtt gatcgtggct tttacgtgaa tgaagattaa
    22921 cgggtaaatt aaattttttc gcaagggaaa gttgtgcctc taaaaattca cattgctttt
    22981 tccataattc aggggtagaa acttcactta ccgctttttc caaaccgatt tcggcaatag
    23041 cggtacactg tggatcttgt tggcttagca aattttccaa taagattaaa tcttgttgtt
    23101 ggtgctgttg aatatacagt ggatgcaacc ctaatccata caccaaattt tccggttttt
    23161 gtttggcaca agcggtcact tttgcaaaat tttttgcaaa tacggcaacg ataagaatgc
    23221 attcaacctg atgctgtttg gcattctcaa ccaattccgg aatgcttaaa ttcaggcttt
    23281 ctgcgagata gtcgaggtga gtatgagtgt caaaaaatcg cataataaaa ccaataaaaa
    23341 cggggactag attgtcccca tttttagcat tttacgcaag caattagttt gttacataag
    23401 catcttcatc acgagcctca gatggcttga ggaaagcaaa gaagcaaata acacaaacta
    23461 ccgtaatcgc aaaaccgata taaactgata attcataatc taaaccgaag ccgattttgt
    23521 tgttcgcaag gtaagttgca cacacggtag tgataaacca tgcaggaatc gagcataccc
    23581 agtggaattt tttatagcgg tataagtaac ctgcggcagt ccataacata accattgcag
    23641 tcatttggtt tgcccaagtg aagtaacgcc ataatacgct gaaatcaact tttgagacaa
    23701 tgaaaccaag tacgaataat ggtacggcaa tatacaaacg ttttactaag gtacgttgtt
    23761 ctaaaccaaa gatttccgct agttgtaaac gagcggctcg gaatgcagtg tcacctgagg
    23821 tgattggtaa tactacaacg cctaatacgg caaaaatacc accgataaac cctaagaagt
    23881 gtaacgagct gtcatatacc actttagacg gtgaaccggc agagatcgca tcttgtaagg
    23941 cttgtgggtt ttcatagaat gaaagaccta ctgcacacca tactaatgca attacccctt
    24001 cagtaatcat tgcaccgtag aaaataaaac gaccttcttt ctcattttgc gcacagcgag
    24061 ccattaatgg ggtttgggtt gcgtggaaac cggataatgc tccgcaagaa atagttaaga
    24121 atagtaatgg ccaaattgga acatcacctt tcacttggaa gttttgggtg aatttttccc
    24181 acgttaagcc ttgaccgtct gcattcactg tacggaagaa gtcgatagga tcagtcgcac
    24241 ttaagtgagc gctgactaga ccatatacca tacctacaga cataaagagt aataatgctc
    24301 cgaagaaagg ataaattcga ccgatgattt tatcaacagg tagtaatgta gcaagaatat
    24361 agtaagcaaa aatgattaac gtccacacag aaatcacggt tgctttatcc ataccccaaa
    24421 cggttacgcc acctgatgct acagattctt taattgcttc aacatcacct aattccattg
    24481 cactttgggt tgcacctgca atatccatgg tgatggtaga gagtaactga gcagggcttg
    24541 caacgaaaac tacgcctact aataaaagca agatgagcgc cattacgttg atgaataact
    24601 tgactggacg acccaagaat ttccctgcca gatttggcat cgttgcgcca ccgttgcgga
    24661 tacttaacat accacagaag tagtcgtgta ctgcaccggc aaaaatacaa ccaatcacaa
    24721 tccaaagcat tgcaactggt ccgtataagg caccaagtat tggtccaaaa atagggccgg
    24781 taccggcaat gtttaataat tgaatcagcc aaatcttggt tttagacatt ggcatatagt
    24841 caacaccgtc gttcattgca taagccggcg ttgctctttt cgggttaatc acgaagattt
    24901 tttcaatgat ttttccgtaa gtaaagtagc caagaacaag cacggctaca cagaaaaaga
    24961 accacaacat agtagaaatc ctataaattg agataaatga tcatttttag cagaactgat
    25021 aaaggcgtgc cattgtaagt gaggagtgag gataaagtaa aatgaattgt tagatttgtg
    25081 tgaataattt actgaaaatg tgaggttcat caaaaaatcc ctttgttctg cgtcaatcaa
    25141 agggactttt taaagttaaa tatcgaattt ttgaattttc gcttcaatgc cttgggcatc
    25201 taatccaaga tcggcataag cttcagcttg agtagattgg ggaacgaaaa agtcaggaat
    25261 accaagcatt acaagcggtt tgattttgcc gatattttgc aaatattcat tcacaaaact
    25321 acctgcgcca ccttgaatag cattttcttc aagcgtaact aacaactcgt gtgaatccgc
    25381 cactttttga agtaatgctt catctaatgg tttaatgaaa cgcatatcta ccaacgtgta
    25441 gttatgtttt tcagccacaa tctttgcttc atcaagcaaa gcaccaaaat ttaaaatcgc
    25501 aactttttta ccttcacgaa taatgtttcc tttacctact tcaagtcttt gcattggctc
    25561 aagttttacc cctttagcat tgcctcgagg gtaacgaata gcacttggcg tattcatcgt
    25621 gtaagcggta taaagcattt ttcgcatttc attttcatcg ctcggtgcca taatggtcat
    25681 attgggaata caacgcataa aacttaaatc aaatgcacct tggtgagttt gcccgtcagc
    25741 gccgacaatt ccggctcggt caatcgcaaa aatcaccggc aggttttgaa tagcaacatc
    25801 gtgaattaat tggtcataag ctcgctgcaa gaagctggaa taaattgcga ctaccggttt
    25861 gtaacctgcg attgctaagc ctgccccgaa agtcactgcg tgttgttcgg caatcgccac
    25921 atcaaaatat tgttcaggga aacgtttgga aaattctacc attcccgagc cttcacgcat
    25981 tgccggcgta atgccgataa ttttcggatc acgctctgcc atttcacata gccaatcgcc
    26041 aaaaatattg gaataagtag gtgctgcttt tgattttggt aactcggctg cggtagggtc
    26101 aaatttcgga acgccatggt agccaatcgg atcattttcc gcaggtgtgt agcctttgcc
    26161 ttttttcgtg cgaatatgca gaaattgagg gcctttcagc tcacgcatat tgctcaaggt
    26221 tttgactaac tcgtcaatat tatgtccatc aatcgggccg atataattaa agcctaactc
    26281 ttcaaacaaa gtgctttcag gggagaaaat cacccctttc atatgctctt cgcttttttt
    26341 cataaagttt ttgatggtag gcactttatc taaaattttc ttactgccgt cacgcactga
    26401 agtatagagc gaaccagaaa aaatgcgggc aaggtggttg tttaatgccc cgacattttc
    26461 agagattgac atttcattat catttaagat aaccaacata tcggtatgca atgcacctgc
    26521 gtggtttaat gcttcaaatg ccattccggc agtgattgca ccatcaccga ttacacagac
    26581 ggttttacgg ccggcatttt ctttttctgc tgccaccgca atgccaagtc cggcactgat
    26641 cgaagtagaa gaatgcccaa cgcttaacac atcgtaaggg ctttcttcac gccaagggaa
    26701 ggggtgaata ccatcttttt ggcggatagt gtgcatttga tctcggcgcc cagtaaggat
    26761 tttatgtggg taagcttgat gaccaacgtc ccaaattaat tggtcgaaag gcgtttgata
    26821 aacataatgc aaagctaccg taagctctac tacccctaag ccagaggcta aatgtccgct
    26881 agtttgactg actgattcca ataaataggc tcgcagttca tcaactacgg ttt
//
LOCUS       DANLXO010000023        26793 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.023, whole genome shotgun sequence.
ACCESSION   DANLXO010000023 DANLXO010000000
VERSION     DANLXO010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 26793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26793
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.023"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(203..937)
                     /locus_tag="PXD69_000825"
     CDS             complement(203..937)
                     /locus_tag="PXD69_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6283042.1"
                     /translation="MARSSYFARLAEWTLLEHLLVKQPENISVCSFGQSFGTSGRLDA
                     EYYQPKFASLFAQLANFKTMKLGEIVNLQKSVEPGSEAYQTEGIPFVRVSDLSKFGIS
                     QTDKYLHPKDFGNVVRPKKDSILLTKDGTVGIAYRVPQDLNVITSGAIVHLELKTDEV
                     LPDYLALALNSPAVQLQAERDAGGSIIQHWKPSEILDVVIPVLPKNIQQTISDKVQQS
                     FALRVESEVLLEKAKILVEQEIENMR"
     gene            complement(965..2320)
                     /locus_tag="PXD69_000826"
                     /pseudo
     CDS             complement(965..2320)
                     /locus_tag="PXD69_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253679.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            complement(2419..4422)
                     /locus_tag="PXD69_000827"
     CDS             complement(2419..4422)
                     /locus_tag="PXD69_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDL6283043.1"
                     /translation="MIEKQNYHLVQLLKDSNYQLTQFSPAYIKKLEESIFLKSGKNGD
                     IPHIQCLVRKKDIKLTPEEAVRQLYLMNLHYEYDYPFERMELEYSVVFGREKKRADIV
                     IFDRDNPNAVYIMVELKKPKLKDGKEQLKSYCNATGAPIGVWTNGESISYYNRRDPNY
                     FKDIPDIPNAQQKLSDLLQERWTIQDLIDNDKIAKQRKSLKDLVIEMEDEVLANAGVD
                     VFEELFQLIFTKLYDEMESTRNKSRYLEFRNYGDTESELKAKIQSLFDRAKNKWEGVF
                     AESAKINLSPSHLAICVSSLEEVKLFNSNLDVVDEAFEYLINKSSKGEKGQYFTPRYV
                     IDMCVKMLDPKPEETVIDTAAGSCGFPVHSIFHVWEKQLKARGLERSHLFTAEEKLPE
                     QTDYVKEKVFAIDFDEKAVRVARTLNLIAGDGQTNVLHLNTLDYERWEDFTKEEEWND
                     VYGEGWKKLRKLRKTKNENRDFQFDVLMANPPFAGDIKETRILARYELGKNSKGKQQS
                     KVGRDILFIERNLDFLKDGGRMAIVLPQGRFNNSSDKYIRDFIAERCRILAVVGLHGN
                     VFKPHTGTKTSVLFVQKWHDELCPKVEDYPIFFATMQKSSKDNSGDKIYVKNADGTLK
                     LDNHQHLIVEHDLFNHDNSTQDGIAEAFIEFAKKEKLSFVGKD"
     gene            complement(4530..8246)
                     /gene="metH"
                     /locus_tag="PXD69_000828"
     CDS             complement(4530..8246)
                     /gene="metH"
                     /locus_tag="PXD69_000828"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL6283044.1"
                     /translation="MNTQHRTELLQNALTERILILDGAMGTMIQKYKLTESDFRGERF
                     KNSTIDLKGNNDLLTLTQPLLISAIHEKYLAAGADIIETNTFSATTIAQADYELESIA
                     YELNLVGAKLARLAADKFSIPEKPRFVAGILGPTNRTCSISPDVNDPGFRNITFMQLV
                     EAYAEATRGLIEGGADLIMIETIFDTLNAKAAVFAIETVFDELGVKLPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAKPLTFGLNCALGPKELRPYVEMMSKISETFVSVHPNAG
                     LPNAFGGYDLGAEEMATYIKEWAELGWLNIVGGCCGTTPEHIQAFAEATKGVAPRKLP
                     EIPTAMRLSGLEPLTIDDNSLFVNVGERNNVTGSAKFKKLIKEEKFAEAIEIAISQVE
                     NGAQVIDVNMDEALLDSKKCMTRFLNILATEPEAAKVPIMIDSSKWEVIEAGLQTVQG
                     KPIVNSISLKEGEEKFIHQAKLCRRYGAAVVVMAFDEVGQADTEERKVEICTRAYRIL
                     VDQLGFPPEDIIFDPNIFAIATGIEEHNNYGVDFIQACERIKRDLPHAKISGGVSNVS
                     FSFRGNNVVREAIHAVFLYYAIKAGMDMGIVNAGQLAIYDDLDPELREAIEDAVLNHR
                     HDTTDRLLEISEKYRGVKVESADESAAEWRNLPVAERLKHALVKGITTYIIEDTEEAR
                     QQFASPLEVIEGPLMAGMDVVGDLFGDGKMFLPQVVKSARVMKQSVAYLEPYINATKQ
                     KGSSNGKMVIATVKGDVHDIGKNIVSVVLQCNNFEVIDLGVMVPADVIIETAIREKAD
                     LIGLSGLITPSLDEMEYFLGEMNRLKLDIPVLIGGATTSKEHTAIKLYPKYNYPVVYT
                     ANASRCVTVCATLMNPEAKAEFWEKTKAEYEEIQRKFAVRKPLRNGLSIEEARANRFD
                     GFSGEWADYVPPTPKQTGIIEYKNVPIATLRKFIDWSPFFMLWGLMGGYPDAFDYPEG
                     GEEARRVYNDAQRVLDEFEQNGKLNPSGIMGIFPAVREGDDIAILNEDRTACIGKSYH
                     LRQQSERGKNSKSPYNLCLSDFIADRESGQQDWFGMFAVCAGIEEHYLVESYKAAGDD
                     YNAILLQAVGDRLAEAMAEYLHFELRTKVWGYTVEDEDNGRLIREEYIGIRPAPGYPS
                     CPEHTEKQIIWDLLEVEQRIGMKLTESYAMWPAASVCGWYFTHPTSNYFTLGKIDEDQ
                     VLDYAKRKGWDELTAKKWLSVAMKQDVKSQAENI"
     gene            8412..9695
                     /locus_tag="PXD69_000829"
     CDS             8412..9695
                     /locus_tag="PXD69_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283045.1"
                     /translation="MTACHEPKRSIWQQIFTKNMLLCVYTGFCSGLPLFVLIQLMPAW
                     LTSANLDIKTIAAFTLTSLPYTWKFLWAALLDRYFPPFLGRRKSWIFISQIGLLVILA
                     SFGLFNPVQDISIIVTLSVLLAFLSATQDIVVDAFRREILSDNELGLGNSIHVNAYRI
                     AGLIPGGLSLFLADHYAWDTVFLITAAFLVPCLFVTLIIAAEPNHKPIDRSKPFYMAF
                     VDPFKEFFTRKGVAGAIGLILFIFLYKLGDSLATTLQTKFILDMGFTKSHIAGIVKIT
                     SLWCSIGGGIIGGVAMLKLGVNRALWLFGFVQLITILGFAYLASFEHFPTESIGAAEL
                     WKLGLVMAGEYLGVGLGTAAFVAFMARETNPAYTAMQLAIFTSLAALPSKMLGAYTGH
                     LVEMMGYYQFFWLCFFIGIPGMLMLFKVAPWGQAE"
     gene            10039..10707
                     /locus_tag="PXD69_000830"
     CDS             10039..10707
                     /locus_tag="PXD69_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283046.1"
                     /translation="MAHNGSGKSTLMRLLSGDITPTSGSILVDGLPLHQLSTKEAAKH
                     IAYLPQRLPEAADFLVQELVALGRFPYQKWLQKPTEFDVQIVEQAMESTSVTQFAKQP
                     VNSLSGGEKQRVWLAMCLAQQTPYLLLDEPLAALDIVYQVEVMQLIRKLVNEQGLTVI
                     IIIHDINLASQFCDEIIALKQGELCIQGSVDEIMQEQKLLEIFGLKLHLFNHPAGLHK
                     VAVL"
     gene            10704..11585
                     /locus_tag="PXD69_000831"
     CDS             10704..11585
                     /locus_tag="PXD69_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6283047.1"
                     /translation="MMFRQYKRFIFLFILQISTAFAQPNIFTPDWSIASALTEMGNPP
                     IAMGDKRIYPLWSHRPIQPNSVLDIGARYQPNRELLAQLPVELVLSNFFYAHLASVYP
                     KEIPQIDVLFDGGNTEPQQHWHTYQKATRMIGTEIKNPNAAEAYLTKTEQTLAQWGKE
                     ILNSNPDIDYYSVVQFGSPRELRIYASNSMFRVAFDLMGLKQADLGVGDRWGNKLIPV
                     SDLAKLPERTCLIVISPFSKMTQADLENSYIWQRLGFGKNRCMKVLPPVWLFGGADSI
                     SHFAEFLHNAMTQGEKE"
     gene            11585..12400
                     /locus_tag="PXD69_000832"
     CDS             11585..12400
                     /locus_tag="PXD69_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL6283048.1"
                     /translation="MKSSFLLIGCILLSLVTAVIRLNMVWEWEWQLLLINVDLLPINQ
                     AAVKAALLPEMTTSFLAGGLLAIASSGLQHIVRNNLASDSTLAVSSGAQLALMIAVIF
                     FPAAELFSSFWIALLGSLAAIVLVLFIAKASKLNPLTLILGGLIVNILFGAIASLLTL
                     FYFDFLFGVMVWGSGSLLQDGWATSITLAITVVVAFFIFVLLSRPLTILSLDDEQARR
                     LGAPVNLLRYLVIFVCAAITALVVSKIGVIGFIGFAVQVWLILPKYDIYYFAS"
     gene            12397..13533
                     /locus_tag="PXD69_000833"
     CDS             12397..13533
                     /locus_tag="PXD69_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6283049.1"
                     /translation="MIAFLAGGFLLFFTNNLIGIVSRIYDTLLPVGAFTATLGAPLLI
                     FLVLRQRKAQFEASNTAYFPVKRLNSWKLPILLLCAGVILFCLLQIIAPTMNGWAISI
                     DENLMSSYRLPRSLSAIATGAMLAVSGSLLQILTRNPMASPEVLGVSSGATIAAVLSF
                     LLFPTLSSISFLLFGVLGSLTVLALIMWLSRKLQPSALMITGVAIGALVSGLMAIIQL
                     SGSPRLTAVISWLSGSTYYANPNTVWILLSVAILLISATLLFIKPLRLISLGETVSYH
                     LGLEVKKVQMIVLLLIALMSAASTLAVGPMSFIGLMTPHLAKNLGAITPEKQIPISAL
                     LGAMLMLIADWLGRYLIFPYEIGAGIIASILGGIYFLLLLKQHK"
     gene            13561..13959
                     /locus_tag="PXD69_000834"
     CDS             13561..13959
                     /locus_tag="PXD69_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL6283050.1"
                     /translation="MNTLSKAIKLALYSSGIGFISTAYAETVTHLDTVEVSAETPNAS
                     SEETGRYAQKKAKGSNGMALSAKDTPQSVTAVTHQQIRDQNLNTIAKALEATHGVSVS
                     LLDRGRYSFSARGFGIDKVKVDGMDLKVSK"
     gene            13994..15697
                     /locus_tag="PXD69_000835"
     CDS             13994..15697
                     /locus_tag="PXD69_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL6283051.1"
                     /translation="MLYDRVEVVRGATGLTTGAGDPSASVNLVRKRANSISRYTILEA
                     GIGRYADFNTMIDHSQALNNSGSVRGRFIAEHKNGNTFIKNEKERYTTLYGNIEADLT
                     DTTKLGLGVSYQKEKRDAALWGGLPAFYSDGGETNWSRSKNASPEWAYWDNESVNYFA
                     DITQKLGEKWELALKGNYRVGKHNSELFYFSGSSLNRQDGLGWSPWPGKFKNDNTQSN
                     VQLDLTGSFSAWGLEHDAAIGIQYNRAHRNSYAADNSTFDGAFDFNNWNGIYARPNWG
                     SMSEKYYQNLKEFGVYVSTRLHLTDRLSMLLGSRISSYRTEGTFYGSTQNFHANDVWT
                     PYAGLTFDINPQNTVYVSYTDIFKPQSQVDINNKLLSPVTGETYEAGWKGSYFNDNLQ
                     TQISVFETRQDNLAQSAGINPNTLLAYYTASKGAKVRGFEVEASGNVTEKLKLSAGYT
                     QWKGDDASGNPINTTQPRKQFKLFATYDMNRLVQGLTVGAGVNWQSRIYTKHATYGEY
                     GQKAYTLVNLMARYQFNDNFSAQLNIDNLFDKKYRNALSFSQYSYGEPFYTRLNLRYE
                     F"
     gene            15809..16453
                     /gene="adk"
                     /locus_tag="PXD69_000836"
     CDS             15809..16453
                     /gene="adk"
                     /locus_tag="PXD69_000836"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDL6283052.1"
                     /translation="MKVILLGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKESTE
                     LGKQAKALMDEGKLVPDELTVALVKDRIAQPDCANGFLLDGFPRTIPQADALKESGVK
                     IDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDDK
                     PETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKILS"
     gene            complement(16515..17330)
                     /locus_tag="PXD69_000837"
     CDS             complement(16515..17330)
                     /locus_tag="PXD69_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL6283053.1"
                     /translation="MSYKVVFSLLFSLFLSTANANWTKINDVNYTWGPFNIYHITLFT
                     ESGTYVEGTRPLMLTLQYKKPWEGRDFAVSLARTWNNLGIKLPEKELDEVITHLRKTF
                     PDIKPEDTLHYIALEDRGYFILNDKVVSDVFNKAFNDAIVAIWLDPKMDISHQLLDPS
                     YKPRAEAESIKPQVEERVAENLQEPIVNTEVSKELKADSQAVEQAPNKIDIPVADKTQ
                     ASVVNEATQPVENKDKKEPEKLEEKPKEMKIENPEVFISPIYDDILMLTKYCV"
     gene            17520..17735
                     /locus_tag="PXD69_000838"
     CDS             17520..17735
                     /locus_tag="PXD69_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDL6283054.1"
                     /translation="MFPEFRDLITQLKQNNSHFARLFDKHNELDQRIKNMEANIELAT
                     HEEVEALKKEKLHLKDQLYAILKQESA"
     gene            complement(17794..18951)
                     /locus_tag="PXD69_000839"
     CDS             complement(17794..18951)
                     /locus_tag="PXD69_000839"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HDL6283055.1"
                     /translation="MSLDLADIRTQITNLDRNLLKLLAERHRLAFDVVRSKEITQKPL
                     RDLEREKILLQELVNFAEAENYQLDPQYVTQIFQRIIEDSVLTQQNYLQNKLNAQKEE
                     QVSIAFLGMRGSYSNMASRQFAKKYQGTLAELSCHSFNEVFEKVSLGEADFGVLPLEN
                     TTSGSINEVYDLLQHTDLTLVGELAYPIKHCVLANGTVDLAEVDTIYTHPQPAQQCSQ
                     FLAGLDKVHIKYCESSSHAMQMVARLNKPNIVALGNEDGGKLYGLTNIKTDIANQAHN
                     ITRFIVVAKEAVQVSPQVQTKTLLLMTTTQQAGALVDALMVFKNHHIRMMKLESRPIY
                     GKPWEEMFYVELEANIHSENTQKALAELEQVTSYLKVLGCYPSEIIEPVKL"
     gene            complement(19073..21139)
                     /gene="prlC"
                     /locus_tag="PXD69_000840"
     CDS             complement(19073..21139)
                     /gene="prlC"
                     /locus_tag="PXD69_000840"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HDL6283056.1"
                     /translation="MSNPLLNYTGLPAFSQIKPEHIKPAVEAVIKECRETVEKVAQIE
                     NPTWENFYMPQAMAEDKFSRAWSPVGHLNAVKNSPELREAYQACLPLLSEYSTWAGQH
                     QGLYQGYVKLKNSPEFETYSVAQKKAIENSLQDFELSGISLPAEKQKRYGEISARLSE
                     LNSQFSNNVLDATMGWDIVITDEAQLKGLPESALEAAKLSAESKGKKGYRFTLEIPSY
                     LPVMTYCENKALREEMYRAYVTRASDQGPNAGKWDNSAVIDEILKLRHEKAQLLGFKT
                     YSDYSLATKMAENPQQVLDFLNDLAARSKAQGKNELCDLKKFAKAHFGIEHLDLWDIP
                     FYSEKQKQALYSVNDEELRPYFPENRVLSGLFEVIKRIFGMRVEEQKDVDVWHKDVRF
                     FNIFDKNDRLRGSFYLDLYARENKRGGAWMDDCINQKRLADGTLQKPVAYLTCNFNKP
                     IGDKPALFTHDEVTTLFHEFGHGIHHMLTEIDVGDVAGINGVPWDAVELPSQFLENWC
                     WEEEALAFISGHYETGEPLPKAKLEQLLAAKNFQAAMFVLRQLEFGLFDFRLHTEYDP
                     SKQGQVLALLKEVKDQVAVAKGVEWARTPHSFSHIFAGGYAAGYYSYLWAEVLSADAY
                     SRFEEEGIFNPETGQSFLDNILTRGGSEEPMVLFERFRGRKPTLDALLRHKGIVGNAE
                     PVDCTQ"
     gene            complement(21270..22010)
                     /gene="pflA"
                     /locus_tag="PXD69_000841"
     CDS             complement(21270..22010)
                     /gene="pflA"
                     /locus_tag="PXD69_000841"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HDL6283057.1"
                     /translation="MSVVGRIHSFESCGTVDGPGIRFILFLQGCLMRCKYCHNRDTWD
                     LDGGKEITVEELMKEVTTYKHFMKATGGGVTASGGEAVLQMEFVRDWFRACKAEGINT
                     CLDTNGFVRHYSPVVDEMLEVTDLVLLDLKQLNDEVHQDLVGVSNKRTLDFARYLHKL
                     NKPTWVRYVVVPGYTDDDDSAHRLGQFIQGMDNIEKVELLPYHRLGAHKWETLGYKYE
                     LEGVMSPPKEDLERIQKIIESYGHTVKF"
     gene            complement(22259..23284)
                     /locus_tag="PXD69_000842"
     CDS             complement(22259..23284)
                     /locus_tag="PXD69_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL6283058.1"
                     /translation="MSKQDLIRSSVAEYLTFITATGESQVDAVYADENVWLSQKMMAV
                     LYDVDVRTISYHLKKIFSDNELAENSVIQFFWITAQDGKNYHTKHYNLSAIIAVGYKV
                     NSERAVQFRKWATEIVHSFAIKGFAMDDERLKNDGTILGKKYFEEQLARIREIRLSER
                     KFYQKITDIYATAVDYDRTATATKRFFATVQNKLHWAIHGHTAAELIMARANAEKPNM
                     GLTNWKDAPQGKIYPFDVVVAKNYLSDNELAQLQRLVSAYLDMAEDMAERQIPMTMAD
                     WETRLNRFLAATDREILQDAGKVTAEIAKSFALSEFEKYRVKQDLTYESDFDLLVKEV
                     AAKYHAG"
     gene            complement(23519..25843)
                     /gene="pflB"
                     /locus_tag="PXD69_000843"
     CDS             complement(23519..25843)
                     /gene="pflB"
                     /locus_tag="PXD69_000843"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDL6283059.1"
                     /translation="MTQLTDAQQKAWEGFAAGEWQTEVNVRDFIQKNYTPYEGDESFL
                     AEVTPATSKLWADVMEMIKVENKTHEPYDIDCDTPSTITSHAPGYIDKSLEKIVGLQT
                     DAPLKRAIMPFGGINMVKGSCKVYRRELKPEVEQIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVITGLPDAYGRGRIIGDYRRMALYGADFLMKDKQRQFASLQARLESGEDIQATI
                     QLREEIAEQHRALGKMKEMAASYGFDISGPATNAQEAVQWTYFAYLAAVKSQNGAAMS
                     FGRVSSFLDIYIERDLKAGKITEQEAQELIDHLVMKLRMVRFLRTPEYDQLFSGDPMW
                     ATETLAGMGLDGRTLVTKNSFRILHTLYTMGPSPEPNLTILWSEQLPEAFKRYCAKVS
                     IDTSSVQYENDDLMRPDFQNDDYAIACCVSPMIVGKMMQFFGARANLAKTLLYAINGG
                     VDEKSGDQVGPKTEAITSEYLDYDDVMTRLDSFMDWLATQYVTALNIIHFMHDKYAYE
                     AALMALHDRDVFRTMACGIAGLSVAADSLSAIKYAKVKPIRTDIEIKNKAGEVVGVAK
                     NVATDFEIEGEYPQFGNNDNRVDDIAVDLVERFMKKIQKLKTYRNATPTQSVLTITSN
                     VVYGKKTGNTPDGRRSGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTF
                     SIVPNALGKDYEAQKRNLAGLMDGYFHHEATVEGGQHLNVNVLNRDTLLDAVEHPEKY
                     PQLTIRVSGYAVRFNSLTKEQQMDVITRTFTESM"
     gene            complement(25933..26757)
                     /gene="focA"
                     /locus_tag="PXD69_000844"
     CDS             complement(25933..26757)
                     /gene="focA"
                     /locus_tag="PXD69_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HDL6283060.1"
                     /translation="MFSPAEMAKIAEDGAVYKATKNQLYSFLSAITAGGFIAIAFVFY
                     TTTQVGASQMPWGMAKLIGGLVFSLGVIMCVVFGAELFTSSTLTIVARASQRINWLQM
                     FKNWVVVYFGNFVGAISIVLLIWFSGQIMAAKGQWGLVILNTAQHKIHHQWFEAFCLG
                     IFCNIMVCIAVWMSYAGKSLTDKAFIMMLPIAMFVASGFEHCVANMFMIPMGIAISHF
                     ASPEFWTAINVDPTQFADLDVSHFVFKNLIPATLGNIVGGVFFIGLMQWFLYIRKH"
BASE COUNT         7463 a         5767 c         5242 g         8321 t
ORIGIN      
        1 ctttcaaact ctttataaag tttgttttga ttactggtat ccgattttat tctatcaata
       61 tgtgttctat ccttacctaa ggaataatgg aagttatacc agctattaca actgagccat
      121 aacattaaaa aaggagagtg gtaatctatc cttgctttat taaaccactc ttttttcaaa
      181 tcttgattat gattaggcat tattacctca tattttctat ttcttgttct acaagtattt
      241 tagctttttc cagtaaaact tcactttcta ctctcaatgc aaaactttgt tgtactttgt
      301 cgctaatggt ttgctggata tttttaggta ataccggaat cactacatct aaaatttcag
      361 acggtttcca atgttggata atagagcctc ccgcatctct ttccgcttgt aattgtacag
      421 caggagaatt caatgctaac gccaaataat cgggtaaaac ttcgtcagtt ttaagctcta
      481 gatgcacaat tgcccctgat gtaatcacat tcaaatcttg cggaacacgg taagcaatgc
      541 cgactgtgcc gtctttagtc agtaatatac tgtctttttt aggtcttaca acattgccaa
      601 aatctttcgg atgtaagtat ttatctgttt ggctgatgcc gaatttagat aaatccgata
      661 cacgcacaaa gggtattccc tctgtttgat aagcttccga gcccggttct accgattttt
      721 gtaaattaac aatctcacct aatttcatcg ttttgaaatt ggctaattgt gcaaataagc
      781 ttgcaaattt aggttggtaa tattctgcat ctaaacgacc gcttgtaccg aatgattgac
      841 cgaatgaaca taccgaaata ttttcaggct gtttgacaag taaatgttct aataaagtcc
      901 attctgctaa acgtgcaaaa taagaagatc tcgccaataa accataaggc ttagcaggat
      961 ctaccccccc cccccgcact tctaactcat tgatattaaa tgaattattt tcaatttcaa
     1021 actctacatt atttttagct tgagcgagta aattttgtgc ttgctgcctt aaatcgttgc
     1081 tttggcggat atattcagca attttttctt ggatttctcc acttatttta ggaattggta
     1141 aattcaaaat atcgttatct ttaattacag gataactcgt acctacatta aattgtagta
     1201 accaatcttt atatagttct gaccgtaata gcacctttaa aacttcatta ttaaaaacag
     1261 agttttcctt tctgcgtaat actgtaaacg caccactaac aactaaatct tgatcatttt
     1321 caccgataat tgttactgca ccacgataag ggcgaacggt tgaaattaaa atatcacctg
     1381 tttgggcttg agttttagca ttagcaggta attcttgtgt ctctatccaa ttcgtttgat
     1441 atgaaccatc accaatatta acatcaccaa tttcaatata ttgatacatc ggttttgtcc
     1501 aatcaggttt ttgggtgata tgtaaatatt catcacgaat aaaaacataa tcttgcgatt
     1561 gaattaaatt ccagtattgc tcatatttag tttgataata ctctgcatct aatcgtcctg
     1621 tttgtaagaa actctctttt aaggatttaa catttacagg attgctatca gcttgaaaag
     1681 ctctcaaacc gagattttct aataataaag tttcagcttc ttggtaactt tgtgttgatt
     1741 tttgtacaaa atcattactt tgcttaatga ttttatctac ctgcttttgt gtttctagat
     1801 caattaaggg gactttaatc gcaccaagct cctcattatt cagattgtat tgtcctgttg
     1861 ggcgtgcatt ccggttaatt tggatttttc cataagaact ttgtaaaaaa gcaaataaat
     1921 acgttggtaa taattcttta ttatattttg attttaatct tacaaaagac attgcttgtg
     1981 taatatttgc ttttggaaaa gtgctactaa cataagctac ccgaccaaca acctccaaag
     2041 ttgcaccaac gatatttact aaaacatccc cttctttcag ttgtgatgaa atcattttct
     2101 cattgatatc ttcgctaata aaataatcta ccgaagagta cttatttaat agattattcc
     2161 taatatcatt ggtttttaat aagacaaccc cctcttttaa gttatcatct cgatctgttg
     2221 gtgttgtacc acttttaatc agagaaacct cattcagcga taatggaaaa ttaaaactcg
     2281 gatggtttaa gtattttttc aaaaagaaag tactatccat tcgttccgaa taacttgcag
     2341 aacgaacctt actcaaataa acctcgctca cctctagccc atctaacaat gcctgatatt
     2401 tagcagggtc aaatgggctt aatcctttcc cacaaaagag agcttttctt ttttagcaaa
     2461 ttcaataaag gcttctgcaa tgccgtcttg ggtactatta tcgtgattaa atagatcgtg
     2521 ctccacaatt aggtgttgat ggttgtctaa tttgagtgtg ccatcagcgt ttttaacata
     2581 gattttatcg cctgaattat ctttgctgga tttctgcatt gtggcaaaga aaatcgggta
     2641 atcctctact ttcgggcaaa gttcatcgtg ccatttttgc acaaatagta cggaagtttt
     2701 tgtgccggta tgtggtttaa acacatttcc gtgtaagccc acaacagcta aaatgcggca
     2761 acgctctgca ataaaatcac gaatatattt atcgctggaa ttgttaaaac gcccttgtgg
     2821 tagcacaatc gccattcgtc caccgtcttt taagaaatct aaattgcgtt caataaataa
     2881 aatatctcgt ccgactttgg attgctgttt tcctttgcta tttttgccta attcatagcg
     2941 agctaatata cgagtttctt taatatcacc ggcaaaaggc ggatttgcca ttagcacatc
     3001 aaattggaaa tctcgatttt catttttagt tttacgtaat tttcttaatt ttttccagcc
     3061 ttctccatat acatcattcc attcttcttc cttagtaaaa tcttcccaac gttcataatc
     3121 taaggtattt aaatgtagta cgttggtttg cccatctcct gcgattaagt ttagggtacg
     3181 agcaacacgt actgcctttt catcgaaatc aatcgcaaag actttttctt tcacataatc
     3241 tgtttgttca ggcaattttt cttcagcagt aaataagtgt gagcgttcta atcctctcgc
     3301 tttaagttgt ttttcccaaa cgtgaaaaat agaatgaact ggaaaaccac agcttcctgc
     3361 tgcggtatca atgactgttt cttcaggttt tggatcgagc atttttacgc acatatcaat
     3421 gacgtaacga ggcgtaaagt attgtccttt ctctccttta ctggatttat taattaagta
     3481 ctcaaatgct tcatccacta catcaaggtt agaattaaac agctttactt cttccaatga
     3541 agatacacaa atcgccaaat gcgaagggga aaggttgatt ttggcacttt cagcaaatac
     3601 gccttcccat ttattttttg cacgatcaaa tagagattga atttttgcct ttaattcact
     3661 ttcggtatca ccatagttac gaaactctaa ataacgactt ttattgcgtg tactttccat
     3721 ttcatcatag agtttagtaa aaataagttg aaataactct tcaaaaacat caactccagc
     3781 attcgccagt acctcatctt ccatttcaat aacaagatct ttcaatgatt tacgttgttt
     3841 ggcaattttg tcattatcta tcagatcttg aatagtccaa cgttcttgta ataaatcaga
     3901 aagtttttgt tgagcattcg gaatatcggg aatatcttta aaataattag gatcacggcg
     3961 attatagtaa gaaatacttt cgccatttgt ccatacacca ataggtgctc cagtcgcatt
     4021 acaataagat tttaattgtt ctttaccatc ttttaatttc ggctttttca gctccaccat
     4081 aatatagaca gcgttaggat tatctctatc aaagatgaca atatccgctc gtttcttctc
     4141 acgcccgaat acaacagaat attctaattc cattcgttca aatggataat catattcata
     4201 atgcaaattc attaaataga gttggcgtac tgcttcttca ggtgtgagct taatatcctt
     4261 tttacgaaca agacattgaa tatgaggaat atctccattt ttccctgatt tgaggaaaat
     4321 agattcctct aattttttta tatacgcagg agaaaattga gttaattgat aattactgtc
     4381 ttttaaaagt tgtactaagt gataattttg tttttcaatc attgttttgt tctcgatgat
     4441 aacttctttg cataaaagag agataaattt tgcatatttt atctcaaaac caaccgcttg
     4501 taacaggcgg gttaaaaccc gccactacat taaatgtttt cagcctgcga cttgacatct
     4561 tgtttcatcg ccacacttaa ccatttcttc gccgtgagtt cgtcccagcc tttgcgtttg
     4621 gcgtaatcca acacctgatc ttcatcaatc ttgccgagag tgaagtagtt gctggtaggg
     4681 tgggtgaagt accagccgca gacacttgct gccggccaca tggcatagct ttcggtgagt
     4741 ttcatgccga tgcgttgttc cacctctaac aagtcccaaa ttatctgttt ctcggtgtgt
     4801 tccgggcagc ttgggtagcc gggcgcaggg cggatgccga tgtattcttc acggattaag
     4861 cgtccgttgt cttcgtcttc cacggtgtag ccccagactt tggtacgtag ctcaaagtgt
     4921 aggtattccg ccattgcttc tgccaagcgg tcgccaacgg cttggagcaa aatggcgttg
     4981 tagtcatcgc ctgccgcttt gtagctttca actaaatagt gttcttcaat gccggcacaa
     5041 acggcgaaca ttccgaacca gtcttgttgt ccgctttctc ggtcggcgat aaaatcgctt
     5101 aaacagaggt tgtacgggct tttgctgttt ttgcctcgtt cggattgttg gcggaggtgg
     5161 taggatttgc cgatacaagc ggtgcgatct tcgtttaaaa ttgcaatatc atcgccctca
     5221 cgcacggcag ggaaaatgcc cataatccca cttgggttga gcttgccgtt ttgctcaaat
     5281 tcgtccagca cccgttgggc atcgttatag acacggcgtg cctcttcgcc gccttccgga
     5341 taatcaaagg catcaggata accgcccatt aagccccaga gcataaagaa cggcgaccag
     5401 tcgataaatt tgcgtagggt ggcaatcggt acatttttgt actcgataat gccggtctgt
     5461 tttggcgttg gcggcacata gtctgcccat tcgccactaa atccgtcaaa acgattggct
     5521 cgagcctcct caatagataa accgttgcga agtggtttgc gaacggcaaa tttacgctga
     5581 atttcttcgt attcggcttt ggttttttcc caaaattcgg cttttgcctc agggttcatc
     5641 aaggtcgcac agacggttac gcaacgtgaa gcgttggcgg tatagactac ggggtagtta
     5701 tatttcggat aaagtttgat cgccgtatgc tcttttgagg tcgttgcgcc gccaatcagc
     5761 accggaatat cgagcttcaa gcggttcatt tcacctaaaa aatactccat ttcgtccagc
     5821 gatggggtaa ttagtccgct taacccaatg agatcggctt tctcccgaat agcagtttcg
     5881 ataattacat cggcaggcac catcacgcct aagtctatca cttcaaagtt attgcactgc
     5941 aacaccacgc taacgatgtt tttgccgatg tcgtgtacat cacctttcac ggtggcgatc
     6001 accattttgc cgttgctcga tcctttctgc ttggtggcgt tgatgtacgg ctctaaatag
     6061 gcaacggact gtttcattac ccgagccgat ttcaccactt gcggcaggaa cattttgccg
     6121 tctccgaaca ggtcgcccac cacgtccata cccgccatga gcggcccttc aatcacttcc
     6181 agcggagagg caaattgctg gcgagcctct tcggtatctt caataatgta ggtcgttatg
     6241 ccttttacga gggcgtgttt taaacgctct gccacaggta aatttcgcca ctcggcggca
     6301 ctttcatcgg cactttctac ttttacgccc cgatattttt cggaaatttc caacaggcgg
     6361 tcggtagtgt catgacggtg gttcagcacc gcatcttcaa tcgcctctcg cagttcaggg
     6421 tcgaggtcgt cataaatcgc caactgccct gcgttcacga tccccatatc cattccggct
     6481 ttgatcgcat agtagaggaa cacggcgtga atagcctcac gcaccacatt gttgcctcgg
     6541 aaagagaaag agacattcga caccccgccg gaaattttgg cgtgtggcaa gtctcgttta
     6601 atccgctcac aggcttggat aaaatccacg ccgtagttat tgtgttcttc aataccggtg
     6661 gcaatcgcaa aaatgttcgg gtcgaaaata atgtcttccg gtgggaagcc gagctgatca
     6721 accaaaatcc gataagctcg ggtacaaatt tctaccttgc gttcttcggt atccgcttgc
     6781 ccgacttcgt caaatgccat caccaccacc gcagccccat agcggcggca gagtttggct
     6841 tggtgaataa atttctcttc gccctctttg agtgaaatgg agttcactat cggcttgccc
     6901 tgcaccgttt gcaagcccgc ctcgatcacc tcccatttcg aggagtcaat cataatcggc
     6961 acttttgccg cctcaggttc ggtagcaaga atgttgagga aacgggtcat acattttttg
     7021 gaatcgagca acgcctcgtc catattcacg tcaatcacct gcgccccgtt ttccacttgg
     7081 ctgatggcaa tttcaatcgc ttccgcaaat ttttcttctt taatcagctt cttaaatttt
     7141 gccgaaccgg tgacgttatt gcgttcgccc acattcacaa acagcgaatt atcgtcaatc
     7201 gtcagcggtt ctaagcccga caaacgcata gcggttggaa tttcaggtaa tttacgaggc
     7261 gcaacgcctt tggttgcttc ggcaaaggct tggatatgct ccggcgtggt gccacaacag
     7321 ccgccgacaa tattcagcca gccgagttct gcccactctt tgatgtaagt cgccatctct
     7381 tccgccccta aatcgtaccc gccaaaagcg tttggcaagc cggcattcgg gtgaaccgaa
     7441 acaaaagtct cactgatttt cgacatcatc tctacataag ggcggagttc cttcggcccg
     7501 agcgcacagt tcaagccgaa cgtcagcggt ttggcgtggc ggagcgagtt ataaaacgcc
     7561 tccgtggtct gccctgacag cgttcgccct gaggcatcgg taatggtgcc ggagatcatt
     7621 atcggcaatt tcacgcccag ttcatcaaac accgtttcaa ttgcaaacac cgccgctttg
     7681 gcattcaggg tatcgaaaat ggtttcgatc ataatcagat ccgccccacc ttcaatcaaa
     7741 ccacgggttg cctcggcata ggcttccacc agttgcataa aggtaatgtt acggaaaccg
     7801 gggtcattaa catcagggga aatcgaacaa gtacggttag tcggcccaag aataccggca
     7861 acaaaacgag gtttttcagg gatggagaat ttatcggcgg caagacgggc aagttttgcc
     7921 cccacaagat tcagctcata agcaatactt tcaagttcat aatctgcttg agcaatggtc
     7981 gtcgcactaa aggtattagt ttcgataata tccgcaccgg cggctaaata tttctcgtga
     8041 atagcagaaa tcaggagtgg ctgggtgagt gtgagtaggt cgttattgcc tttaagatcg
     8101 atggtactgt ttttaaaacg ttcacctcgg aaatcagatt cggttagttt atatttttgg
     8161 atcatcgttc ccatcgcacc gtctaagata agaatgcgtt cggtaagggc attttgaagt
     8221 aattcggttc tatgctgcgt gttcatactc tgcttccagt tttttagttt gattaaaagg
     8281 aataatagaa atatgtcgca aggctgtcaa accttatctg tgacgaaatg gaaagggtta
     8341 gagtcgcctt taaaattatg ctatattggc tcagttcttc ccctttttat tttgcaaaat
     8401 gtaggaaaaa tatgaccgct tgtcacgaac ccaaacgctc tatctggcaa cagattttta
     8461 ctaaaaatat gttgctttgt gtttacaccg gcttttgttc cggtttaccg ttgtttgtgt
     8521 taattcagct aatgccggct tggctaacca gtgccaattt agatattaaa actattgccg
     8581 ccttcaccct gacctctttg ccctacacgt ggaaattcct gtgggctgca ttgttagatc
     8641 gctactttcc acctttttta ggcagacgca aaagctggat tttcatttca caaatcgggc
     8701 tattggtgat tttagccagc tttggcttgt tcaacccagt gcaagatatt tcaattattg
     8761 ttactctttc tgtgctatta gcttttcttt ccgccacgca agacattgtg gtggatgcct
     8821 ttcggcgtga aattttatcg gataacgaac tcgggttagg taactctatc cacgttaatg
     8881 cttatcgtat tgcagggctg attccgggtg ggctttcatt atttttagcc gatcactatg
     8941 cgtgggatac cgtatttctg attaccgctg cttttttagt gccttgctta ttcgttacgc
     9001 taataatcgc tgccgagccg aatcataagc caatcgaccg ttctaagccg ttttatatgg
     9061 cgtttgtcga tccgttcaaa gagtttttca cccgtaaagg cgtggcagga gcgattgggc
     9121 tgattctatt tattttccta tataaattag gcgattccct tgcaactacg ctacaaacca
     9181 aatttatttt ggatatgggt tttactaaat cgcacattgc cggcattgtg aaaataactt
     9241 cactttggtg cagcattggc ggcggtatta ttggtggcgt ggcaatgttg aaattgggcg
     9301 ttaaccgagc cttatggctg ttcggatttg tacaattaat tactatttta ggcttcgctt
     9361 accttgccag ttttgagcat ttccctaccg aaagcattgg agctgccgag ctttggaaat
     9421 taggcttagt gatggcaggt gaatatctgg gcgtgggttt aggcacagcg gctttcgttg
     9481 cctttatggc tcgtgaaact aatcccgctt acactgcaat gcagctcgcc attttcacca
     9541 gccttgctgc cctaccaagc aaaatgttag gggcatacac agggcattta gtggaaatga
     9601 tgggctatta ccaattcttc tggctctgtt tctttattgg tattccggga atgctaatgt
     9661 tgtttaaggt tgctccttgg ggacaagctg aatagctatt cataaaaata agatttttta
     9721 ttaaatatcc gaccacttat aaccgattga attacctagt aatttagtcg gttatttttt
     9781 atttatccta aaatttaccc tcacctaaaa ctaaatgata ttgactttca tttataataa
     9841 aaatatattt agcaccgttt tcataataga ttttcatcta ctcattttca ttttgattga
     9901 tttggtgggg taatcccacc ttttttatgc tcttaaaaca caacactatg attcaaataa
     9961 attccattag ctactctgtt gaacaaaacc gtaaactgct aagcaatatt tccctcaatt
    10021 taagcaaggg gcgtttatat ggcgcataac ggctcgggta aatcaacgtt aatgcgttta
    10081 ctaagcggag atataacgcc taccagcggt tcaattttag tcgatggatt accacttcat
    10141 cagctttcta ccaaagaagc ggcaaaacat attgcctatt taccacaacg tttacctgaa
    10201 gcggcggatt tcttagtgca ggaactggtt gctttagggc gatttccata tcaaaaatgg
    10261 ctacaaaaac caacagaatt tgatgttcaa attgttgagc aagcaatgga aagcacctcc
    10321 gttactcagt ttgctaaaca gcctgtaaat agtctatcag gcggagaaaa acaacgagtt
    10381 tggcttgcta tgtgcttagc ccaacaaaca ccctatttac tgctagatga gccattggct
    10441 gcccttgata ttgtttatca agttgaagta atgcagctta ttcgcaagct agtgaatgaa
    10501 caaggtctaa ctgtcattat cattattcac gatattaatc ttgcctccca attttgtgat
    10561 gaaattattg cgttaaagca aggcgaactc tgtattcaag gttctgttga tgaaattatg
    10621 caagaacaga aattacttga gatcttcggg ctaaaactgc acttgtttaa ccaccctgca
    10681 ggcttacata aagtggcggt attatgatgt ttaggcaata caagcggttc atttttctct
    10741 ttattttgca aatttctacc gcatttgctc aacctaatat ttttacacca gattggtcta
    10801 ttgcctctgc ccttactgaa atgggaaatc cgcccattgc gatgggggat aagcgaattt
    10861 atccgctatg gtcgcaccgc cctattcagc ctaatagcgt gttagatatt ggagcgcgtt
    10921 atcagcctaa tcgcgaatta ttagcacagc ttcctgttga attggtgcta tcaaactttt
    10981 tctacgctca cttggcttct gtttacccga aagaaattcc acaaatagac gtgctatttg
    11041 atggtggcaa tactgaacct cagcaacatt ggcatactta ccaaaaagcc actcgtatga
    11101 ttggaacaga gattaaaaac cctaatgcgg cagaagcata tttaacgaaa actgaacaaa
    11161 cgttggctca atgggggaaa gaaatcctta acagtaatcc agatattgat tactactctg
    11221 ttgttcaatt tggctctccg agagagttac gcatatatgc gtctaattca atgttccgtg
    11281 tagcctttga tttgatgggc ttaaaacaag ctgatttagg tgtgggagat cgctggggaa
    11341 ataaacttat tcctgtgagt gatttagcta aattacccga acgcacctgt ttaattgtca
    11401 tctcaccttt ttctaaaatg acgcaagcag atttagaaaa tagctacatt tggcaacgtt
    11461 taggatttgg taaaaaccgt tgtatgaaag tattaccgcc tgtttggctc tttggtgggg
    11521 ctgattccat ctcgcacttt gctgagtttt tacacaatgc aatgacacaa ggagaaaaag
    11581 agtaatgaaa tcatcattct tattgattgg ctgtattctt ttatccttag taacagctgt
    11641 tatccgttta aatatggtct gggagtggga atggcagtta ctactcataa atgttgattt
    11701 attgccaatt aatcaagctg cggtaaaagc agctctttta cctgaaatga caacgtcatt
    11761 tttagcaggc ggtttattgg ctatagccag cagtggctta caacatattg tcagaaataa
    11821 tttagcgtca gatagcacac ttgccgtcag tagcggggct caacttgcat tgatgattgc
    11881 ggttatcttt ttcccagccg ccgagctttt ttctagtttc tggattgcgt tacttggctc
    11941 tttagctgct atcgtactgg ttttatttat tgctaaagcc tctaagctca atccccttac
    12001 ccttatttta gggggattga ttgttaatat tttgtttgga gctattgcct ctttactgac
    12061 ccttttctac tttgattttt tatttggcgt gatggtttgg ggaagtggct cacttttaca
    12121 agatggttgg gcaacttcta ttaccttagc gataacggta gtagttgcat tttttatctt
    12181 tgtcttactc tctcgtccac tcacaatttt aagtttagat gatgaacaag ctcgccgctt
    12241 aggcgcgcct gttaatttac tacgctactt agttattttt gtttgtgccg ccattacagc
    12301 attggttgta agcaaaatag gtgtgattgg ctttattgga tttgcagtgc aagtttggct
    12361 cattttgcca aaatacgaca tttattactt cgcctcttga ttgcttttct agcgggcgga
    12421 tttttactct tttttaccaa taatctcatc ggcattgtta gcagaattta cgacactcta
    12481 ctacctgttg gtgcatttac cgcaacacta ggcgcaccat tattaatttt cttggtatta
    12541 cgccaacgta aagcacaatt tgaagcaagc aatacagcat acttccccgt taaacgcctc
    12601 aattcgtgga aactgccaat attgttgtta tgcgctggag ttatcctatt ttgtctatta
    12661 caaatcattg ctccaacaat gaatggctgg gctattagca ttgatgaaaa cctgatgagt
    12721 tcctaccgct tgcctcgtag tctaagtgcg atagcaacag gggcaatgct tgcggtaagt
    12781 ggtagcctat tacaaatctt aacgagaaac ccaatggcaa gccctgaagt attaggtgtg
    12841 agttcagggg caactattgc tgcagtactg tcattcttac ttttcccaac attatctagc
    12901 attagcttct tgttatttgg tgtattaggg agtttgactg ttctcgctct tattatgtgg
    12961 ctctctcgta aattacaacc atcagcgtta atgattacag gtgttgctat tggagcttta
    13021 gtcagtggct taatggctat tattcaacta agcggcagcc ctcgtttaac ggcagttatt
    13081 agttggctgt ctggctcaac ctattacgct aatccgaata cagtttggat tttattatct
    13141 gttgcaatcc tacttatcag tgccacttta ctgtttatca aacctttacg tttgatctca
    13201 cttggcgaga ccgtttctta ccatttaggg ttagaggtta aaaaagtaca aatgattgta
    13261 ttacttttaa ttgccctaat gagtgccgcc tctacacttg cggtagggcc aatgagcttc
    13321 attgggctaa tgacccctca tttagctaaa aatttaggtg caattacacc ggagaaacag
    13381 atccctatat cggcattatt aggggcaatg ctaatgctca ttgccgattg gctcgggcgt
    13441 tatctaattt tcccttatga gattggggca ggcattattg cctctattct cgggggtatc
    13501 tatttcttac tgttactcaa acaacataaa taatttttta ttcattactt aggagaaatt
    13561 atgaacacgc tatctaaagc gataaaactt gccttataca gttctggtat agggtttatc
    13621 tcaacagctt acgctgaaac agttactcat cttgataccg tagaagtaag tgccgaaacg
    13681 ccaaatgcct catcggaaga aactggacgt tatgcacaga aaaaagccaa aggctctaat
    13741 ggaatggcat tgagtgcgaa agacacgcca caaagcgtaa cggctgtaac gcatcaacaa
    13801 atcagagatc aaaatcttaa tacgattgcc aaagcacttg aagcaactca cggtgtttct
    13861 gtttctttac ttgacagagg acgctattct ttcagtgctc gtggttttgg gattgataaa
    13921 gtcaaggtag atggtatgga tctcaaagta agtaaataac caatggacaa cgggcgaaaa
    13981 tacaggcaac agcgtgttat acgaccgagt agaagttgtg cgtggtgcta caggcttaac
    14041 tactggggca ggcgatcctt ctgcaagtgt taatcttgtt cgtaaacgag ccaatagcat
    14101 ttcccgttat actattttag aagctggaat cgggcgttat gctgatttca atacaatgat
    14161 tgaccatagc caagcattga ataattcagg atcagtaaga ggccgcttta ttgcagagca
    14221 taaaaacggt aatacgttca ttaaaaatga aaaagaacgt tacaccacgc tttatggcaa
    14281 tattgaagca gacttaactg acactaccaa acttgggtta ggtgtaagct atcaaaaaga
    14341 aaaacgtgat gcagcacttt ggggtggttt acccgcattc tatagcgacg gtggtgaaac
    14401 taactggagc agaagcaaaa atgccagtcc ggaatgggct tactgggata atgaatccgt
    14461 aaactatttt gccgatatta cacaaaaact aggcgaaaaa tgggaacttg cattaaaagg
    14521 caattaccgt gtaggcaaac ataattcaga acttttctat ttcagcggct catcacttaa
    14581 tcgccaagat ggattaggtt ggtcgccttg gccgggtaaa tttaaaaatg ataatacaca
    14641 atctaatgtg cagcttgatc ttaccggttc attctctgct tggggattag aacacgatgc
    14701 ggcaatcggt attcaataca atcgagcaca tcgtaattcc tacgctgccg ataatagcac
    14761 ctttgacgga gctttcgact ttaataattg gaatggcatt tatgctagac caaactgggg
    14821 aagtatgtct gaaaaatact accaaaactt aaaagagttc ggggtgtatg tttctacccg
    14881 tttacatctt acagatagac tttctatgct tctaggttct cgtatttcat cgtaccgcac
    14941 agaaggcact ttctatggtt caacacaaaa cttccacgct aacgatgttt ggacacctta
    15001 tgcaggatta acctttgata ttaatccaca aaataccgtt tatgtaagtt ataccgatat
    15061 tttcaaacca caaagtcaag tggacatcaa taacaaacta ctctctcctg ttacgggcga
    15121 aacctacgaa gcaggttgga aagggagtta tttcaatgac aacttgcaaa ctcaaattag
    15181 cgtatttgaa acaagacaag ataatctagc tcaatctgcc ggtattaacc ctaatacatt
    15241 attagcctac tacacagcct ctaaaggtgc gaaagttcga ggctttgaag tagaagcatc
    15301 tggaaatgta actgaaaaat taaaactcag tgcaggatat actcagtgga aaggcgatga
    15361 tgcttcaggt aacccaatta acacaactca accacgcaaa caatttaaac tctttgcaac
    15421 ttacgatatg aaccgtttag tgcaaggttt aacggtagga gcaggtgtaa actggcaaag
    15481 cagaatttat accaaacacg ctacttatgg cgaatatggt caaaaagctt acactttagt
    15541 gaatttgatg gctcgttatc aatttaatga caacttctca gcacagctta acattgataa
    15601 cttattcgat aaaaaatatc gtaacgccct cagctttagc caatatagct acggtgagcc
    15661 attctataca cgcttaaatt tacgctatga attctaattc cgtataacaa gcggtcaaaa
    15721 aattaaaaaa atttgcaatt ttaggcagta atcggtaagg ttactgccta agtgatttta
    15781 ttatttttag tttaattgag gttttcaaat gaaagtgatt ttattaggtg cgccgggtgc
    15841 gggcaaaggt acgcaagctc agtttattat gaacaaattc ggtattccgc aaatttcaac
    15901 cggcgatatg ttccgtgcag cgattaaaga aagcactgag cttggtaaac aagcaaaagc
    15961 attgatggac gaaggcaagt tagtgccgga tgaattaacg gtcgccttag taaaagatcg
    16021 tattgctcaa ccggattgtg ctaatggctt cttattagac ggtttcccac gcaccattcc
    16081 gcaagctgat gcgttaaaag agtcaggtgt aaaaattgat ttagtgttag agtttgatgt
    16141 agctgatgaa gtcattgttg agcgtatgag tggtcgtcgt gttcaccaac cttcagggcg
    16201 tacttaccac gtggtgtaca atccaccgaa agtggaaggc aaagatgatg tgactggtga
    16261 ggatttaatt atccgccaag atgacaaacc tgaaacggta ttagagcgtt tagcgattta
    16321 ccacaaacaa accaaaccgt taatcgccta ctacaccgca gaagcagaag ccggcaacac
    16381 tcgttatgag cgtttagatg gaacaaaacc agtggaagaa gtaagtgctg agttagcgaa
    16441 aattttatct taaatggatt attaaaatga acaagcggta atatttttcg agaatattac
    16501 cgcttgttct ttgcttaaac acaatatttg gtgagcatta agatatcatc ataaatcggt
    16561 gaaataaaca cttccggatt ttcaatcttc atctcctttg gtttttcttc tagcttttct
    16621 ggctctttct tatctttatt ctctaccggt tgagtcgctt catttaccac actagcttga
    16681 gttttatctg ctacaggtat atctattttg tttggtgctt gctctactgc ttgagaatcc
    16741 gctttcagct ctttagaaac ttcagtattt acgataggtt cttgtaagtt ttccgctact
    16801 ctttcctcta cttgtggctt aatactttct gcctctgctc tcggtttata agatggatca
    16861 agtaattgat ggctaatatc cattttcgga tcaagccaaa ttgctacaat agcatcattg
    16921 aaagctttat taaacacatc agagactact ttatcattta aaataaaata acctctatct
    16981 tctaatgcaa tatagtgcaa tgtatcttca ggcttaatat ctgggaaagt ttttctcagg
    17041 tgggtaataa cctcatctaa ctctttttca ggtagcttaa tgcctaaatt attccaagtt
    17101 cttgctaaag aaaccgcaaa atcacgcccc tcccacggtt ttttatattg tagagtaagc
    17161 attaaaggac gtgtaccttc tacataagta ccgctctcag taaaaagcgt aatatggtaa
    17221 atattaaatg gcccccacgt ataattcaca tcattaattt ttgtccaatt tgcatttgct
    17281 gttgataaaa atagagaaaa caacagcgaa aagaccactt tatagctcat tatttttgtg
    17341 tccttaaatc taaaattcct actcattatt atagccttaa atatggctca cacacattat
    17401 aattttcgat ataaattttg tgatcaagtt caaaaaaata gaaagattta acagtaaatc
    17461 aacaaaaaaa tgctagtatt taatcaagta aaatttgcaa ccactattag gagttaaata
    17521 tgtttccaga atttcgtgat ctcataaccc aattaaagca aaacaattca cattttgctc
    17581 gcttatttga taaacataat gagctagacc agcgtattaa gaatatggag gcaaatattg
    17641 aactggcaac acatgaagaa gttgaggcac taaaaaaaga aaaattgcat ttaaaagacc
    17701 aactttatgc aattctaaaa caagaatcgg cttaacctaa agtaaaagct cagaaaatat
    17761 tctgagcttt aatttcggtc atattagaca atattacagt tttaccggct caataatttc
    17821 gcttgggtag caacccaaca ctttgaggta gctggtaact tgctccaatt ccgccaatgc
    17881 tttttgggtg ttctcggaat gaatatttgc ctccagctcc acataaaaca tctcttccca
    17941 aggtttgccg taaatcgggc gggattccag tttcatcata cgaatatgat gatttttgaa
    18001 taccattaac gcatcgacca atgcacccgc ctgttgcgtg gtggtcatta acagtaacgt
    18061 tttggtttgt acctgtggcg aaacctgcac agcctctttg gcaacaacaa taaaacgggt
    18121 gatattgtga gcttgattag caatatcggt tttgatattc gtcaagccat acaattttcc
    18181 gccatcttca ttgcccaagg caacaatatt cggcttattc aagcgagcca ccatttgcat
    18241 tgcgtgcgag ctgctttcgc aatatttgat atgtacttta tctagcccgg ctaaaaattg
    18301 gctacattgc tgggcaggct gagggtgggt gtaaatggta tccacctccg ccaaatcaac
    18361 cgtgccgttt gccaatacac aatgtttgat tgggtacgcc aattcaccca ctaaggttaa
    18421 atcggtatgc tgcaataaat catacacttc attgatcgaa cctgaagtcg tgttttcaag
    18481 cggcagtacg ccaaaatcgg cttcaccaag gctgactttc tcaaatactt cattaaaaga
    18541 atggcagctt aattccgcca atgtgccttg atattttttg gcaaactgtc gagatgccat
    18601 attagaataa gagcctcgca ttcccaaaaa cgcaatcgaa acctgctctt ctttttgtgc
    18661 attcaattta ttttgcagat aattttgctg agtcagcact gaatcttcaa taatacgttg
    18721 gaaaatttgg gtcacatatt gcggatcaag ctggtaattc tccgcttcgg caaaatttac
    18781 cagttcttga agcaaaatct tttcccgttc taaatctctc aagggttttt gtgtgatttc
    18841 tttgctccgc accacatcaa aggctaagcg gtggcgttct gccagtagct ttaataaatt
    18901 gcggtctaag ttggttattt gggttcgaat atcggctaaa tctaaagaca ttatttcact
    18961 ctctgtcagg ctaaatgctg aaaattataa cgagttgcaa aagaaagaaa agacaagcgg
    19021 tcaaatttac aaaaaaattt gcaaatctaa ccgcttgtaa aacgtgttta ctttattgag
    19081 tgcaatcaac aggctcggca ttacctacaa tgcctttgtg tctgagcaag gcatcaaggg
    19141 ttggcttacg cccacggaag cgttcgaaca gcaccattgg ctcttctgaa ccgcctcggg
    19201 ttaagatatt atctaagaaa gactgccccg tttcagggtt gaaaatcccc tcttcctcaa
    19261 agcgtgaata ggcatctgct gaaagcactt ccgcccataa ataactgtag tagcccgccg
    19321 catagccgcc tgcaaaaata tgcgagaaac tgtgtggcgt tctcgcccac tctacgcctt
    19381 tggcaacagc gacttggtct ttcacctctt taagtaaggc taacacttgt ccttgtttgc
    19441 tcgggtcata ttcggtgtgt aggcggaaat caaacaagcc aaattctaat tggcgaagca
    19501 caaacattgc cgcttggaag tttttcgccg ccaataattg ctctaatttc gcttttggta
    19561 acggctcgcc ggtttcataa tgccctgaaa taaaggctaa tgcctcttct tcccagcacc
    19621 agttctctaa gaattggctt ggcagctcca ctgcgtccca cggcacaccg ttaatgccgg
    19681 cgacatcgcc cacgtcaatt tcagttagca tatggtgaat gccgtgtcca aactcgtgga
    19741 acaaagttgt cacttcatcg tgggtaaaca atgccggttt atcgccaatc ggtttattga
    19801 agttacaggt taaatatgcc accggttttt gtaatgtgcc gtcagccaag cgtttttggt
    19861 tgatgcaatc atccatccac gccccaccac gtttgttttc acgagcgtat aaatctaagt
    19921 agaacgagcc acgcaagcgg tcatttttat caaaaatatt gaaaaaacgt acatctttgt
    19981 gccatacatc cacatctttt tgttcttcca cacgcatacc gaaaatgcgt ttaattactt
    20041 caaataagcc tgataatacg cgattttccg ggaaatacgg gcgaagttct tcatcattga
    20101 ccgaatacaa tgcctgtttt tgtttttcgc tgtagaacgg aatatcccat aaatccaaat
    20161 gttcaatgcc gaaatgggct ttagcaaatt ttttcaaatc gcataattca tttttgcctt
    20221 gagctttcga gcgagcggct aaatcgttca agaaatctaa tacctgttgt ggattttctg
    20281 ccattttggt ggctaatgaa taatcagaat aagtcttaaa gccgagaagt tgggcttttt
    20341 cgtgacgcag ttttaagatc tcatcaatca ccgcactgtt atcccatttg cctgcattcg
    20401 ggccttgatc agaagcacga gtcacataag cacggtacat ttcctcacgc agtgctttgt
    20461 tttcacaata cgtcatcacc ggcaaatagc ttgggatttc aagagtgaag cgatagcctt
    20521 tcttaccttt gctttctgcg gataattttg ccgcttctaa tgccgattcc ggcaagcctt
    20581 taagctgtgc ttcatcggta attacaatat cccaacccat tgttgcatca agtacgttgt
    20641 tgctaaattg cgagttgagt tccgacaagc gtgcagaaat ttccccgtag cgtttttgtt
    20701 tctctgccgg cagtgaaatg cctgataatt caaaatcttg taagctgttt tcaatcgcct
    20761 ttttctgtgc aaccgaataa gtttcaaact cagggctgtt ttttaacttc acatagcctt
    20821 gatataaccc ttgatgttgc cccgcccaag tgctgtattc cgataataac ggcaagcacg
    20881 cttggtaagc ctcacgcaac tctggggaat ttttcaccgc attcaaatgc cctaccggtg
    20941 accacgcacg ggagaattta tcctctgcca ttgcttgtgg catatagaaa ttttcccacg
    21001 tcgggttttc aatttgtgcg actttttcaa cagtttcacg gcattctttg atcaccgctt
    21061 ctaccgccgg tttgatatgt tcaggtttga tttgtgagaa cgcaggcaag cctgtgtaat
    21121 ttaaaagagg gttagacatt attttttcct tttatggtca aaatgaaaat tcgtatcaag
    21181 ataatacaca aagtgagaga gaaaagaaaa caagcggtca tatttcaata attttttgca
    21241 aaaaaatcac aaaatatgac cgcttgtctt tagaatttga ctgtatgccc gtaactttca
    21301 atgatttttt ggatacgctc taaatcctct ttaggcggtg acattacccc ttccagctca
    21361 tatttatagc ctaaggtttc ccatttgtga gcccctaaac gatgataagg cagaagttcc
    21421 actttctcaa tgttatccat tccttgaata aactgcccta aacgatgggc agaatcatcg
    21481 tcatcagtat aacccggcac gaccacatag cgaacccaag tcggtttatt taatttgtgc
    21541 agataacggg cgaaatcaag ggtacgctta ttcgacaccc cgactaaatc ttggtgaact
    21601 tcatcattga gctgttttaa atccagcaag accaaatcgg tcacttcaag catttcatcc
    21661 accaccgggc tataatggcg aacaaaacca ttggtatcta agcaggtatt aatgccttca
    21721 gccttacagg cacgaaacca atcccgcaca aactccattt gcaacaccgc ttccccaccc
    21781 gaagctgtta caccaccgcc ggttgctttc ataaaatgct tataagtcgt gacttctttc
    21841 atcagctctt caaccgtaat ttccttacca ccatcaagat cccaagtatc acgattatgg
    21901 caatatttac accgcatcaa acagccttgc aagaacagaa taaaacgaat ccccggtcca
    21961 tctaccgtac cgcaggattc aaaagaatgg atacgtccaa caacagacat ttgtcacctc
    22021 aaccctcaaa aaattttgag aaattgtagc aaatttttat gttgttcgca gaaataaatc
    22081 acaccggtat attttaagaa aggagaaagt catactattt tttgcctatt tcaggaataa
    22141 acttttatta atctattgac tccatcaaca tatcaaccaa atatgtttaa atttttgcat
    22201 tttttaaagc tattttgacc gcttacaagc agtcggtttt tctgaaaact ttgcaaacct
    22261 agccggcgtg gtatttggcg gcgacctctt ttaccagtaa gtcgaaatcg ctttcgtagg
    22321 tgagatcctg cttgactcgg tatttttcaa attcgctgag ggcgaaagat ttagcaattt
    22381 cagcggtaac tttgccggca tcttgtaaga tttctcggtc ggtggcggca agaaagcggt
    22441 taaggcgggt ttcccagtct gccattgtca tcggaatttg gcgttctgcc atatcttccg
    22501 ccatatccaa ataggcagag accagccgtt gtagttgtgc taattcatta tccgataaat
    22561 aatttttggc aaccaccaca tcaaaggggt aaattttgcc ttgcggagcg tctttccaat
    22621 tcgttagccc catattcggc ttttcagcgt tggctcgtgc cataatcagc tcggcggcgg
    22681 tatgcccgtg aattgcccaa tggagcttgt tctgcacggt ggcaaaaaag cgtttggtgg
    22741 cggttgcggt gcggtcgtag tccacggcgg tagcgtaaat gtcggtgatt ttttggtaga
    22801 acttgcgttc ggataaccga atttcccgaa tacgagcaag ctgttcttca aagtattttt
    22861 tgcccaaaat cgtgccgtca tttttcagcc gttcatcgtc catcgcaaag cctttaatcg
    22921 caaagctatg cacgatttcg gttgcccatt tgcgaaactg caccgctcgc tcggaattga
    22981 ctttataacc caccgcaata attgccgaca gattataatg cttggtgtgg tagtttttgc
    23041 cgtcttgggc agttatccaa aaaaattgga taactgaatt ttcagctaac tcattgtcac
    23101 taaagatttt tttgagatga tagctaatgg ttcgtacatc aacatcatac aacaccgcca
    23161 tcattttttg gctaagccat acattttcat cggcgtaaac ggcatcaact tggctttcgc
    23221 cggtagctgt aataaaagtg aggtattccg ccacagagga acgaattaaa tcttgcttag
    23281 acatctcttt ctcccatata gaacactgta attataaaca atattacgaa agctgtgtaa
    23341 atgaatagcc aatttttcga gcgagatcac aaaaaaaccg cttgcggcat aaatgctaca
    23401 agcggttgat tattactcac aaaattgttt ccaattttgt tcgctcctac ggagccgtcg
    23461 gcaaagccaa cgttcaaaac gcaatgcgtt ttgtggctaa aagttttgca aattgtaatt
    23521 acatactttc agtgaaggtg cgggtaatta cgtccatttg ttgctctttg gttaaagagt
    23581 tgaaacgtac cgcatagcct gaaacacgaa tcgttaattg cggatatttt tcagggtgtt
    23641 ctaccgcatc taataatgta tcacggttta acacgttcac atttaagtgc tgaccgcctt
    23701 ctacagttgc ttcgtggtgg aagtagccgt ccattaagcc tgcaaggtta cgtttttggg
    23761 cttcgtaatc tttacctaac gcatttggta cgatagagaa agtataagaa ataccatctt
    23821 tcgcataggc aaacggtaat ttcgccacag aagttaatga agctaccgca cctttctggt
    23881 cacgaccgtg cattgggttc gcacccggtc cgaatggagc acctgagcga cgaccgtccg
    23941 gtgtattacc ggttttctta ccatatacca cgttagaagt gatagtaagc acagactgag
    24001 tcggcgttgc attgcggtat gttttgagtt tttgaatttt cttcataaaa cgttcaacta
    24061 aatcaactgc aatgtcgtcc acacggttat cgttgttacc gaattgcgga tattcaccct
    24121 caatttcaaa gtcggttgct acgtttttcg ctacaccaac cacttcgcca gctttgtttt
    24181 tgatttcaat atcggtacgg attggtttta ctttcgcata tttaatggct gaaagtgagt
    24241 ctgccgctac tgaaagccct gcgataccac acgccattgt gcggaacaca tcacggtcgt
    24301 gaagagccat taatgccgct tcgtatgcat atttatcgtg cataaagtgg ataatgttca
    24361 gtgctgtcac atattgggtt gcaagccaat ccataaagct gtctaagcgg gtcattacat
    24421 catcgtaatc taagtattca cttgtaattg cttcagtttt aggccctact tggtcgcctg
    24481 atttctcatc aacaccgcca ttgattgcgt ataacaaggt tttcgctaag tttgcacgag
    24541 cgccgaagaa ctgcatcatt ttacccacga tcattggcga tacgcagcac gcaatcgcat
    24601 agtcatcgtt ttggaaatcc ggacgcatta agtcatcgtt ttcatattga actgatgaag
    24661 tatcaataga cactttcgca cagtagcgtt taaatgcttc cggtaattgt tcagaccaaa
    24721 gaatagttaa gtttggctcc ggtgacggcc ccattgtgta aagggtgtgt aaaatacgga
    24781 agctgttttt ggttactaag gtacgaccgt ctaaacccat accggctaag gtttcggttg
    24841 cccacattgg gtcgcctgag aataattgat cgtattccgg agtacgcaag aaacgcacca
    24901 tacgcaattt cattactaaa tggtcgatta actcttgggc ttcttgctcg gtaattttgc
    24961 cggcttttaa gtcacgttcg atataaatat ctaagaatga agacacacga ccgaaagaca
    25021 tcgccgcacc gttttgcgat ttaaccgctg caaggtaagc gaaatatgtc cattgcaccg
    25081 cttcttgtgc attggttgca ggacctgaaa tatcaaaacc gtagcttgca gccatctctt
    25141 tcattttgcc taaagcacgg tgttgctcgg caatttcttc acgcagttga atcgtggctt
    25201 gaatatcttc gccggattct aaacgagctt gtaatgaggc aaactggcgt tgtttgtctt
    25261 tcattaagaa gtctgcacca taaagtgcca tacggcggta gtcaccgata atacgaccac
    25321 gaccataagc atccggcaaa ccggtaatta cacctgattt acggcaacgt aaaatatccg
    25381 gagtgtaaac atcgaatacc ccttggttat gggttttacg gtattcggta aagatttgtt
    25441 ctacttcagg tttaagctca cggcgataaa ctttgcacga acctttcacc atattgatac
    25501 caccaaacgg cataatcgca cgttttaatg gagcatctgt ttgcagacca acgatttttt
    25561 ctaacgattt atcaatataa cccggtgcgt gtgaggtaat ggttgatggc gtgtcgcagt
    25621 caatatcata cggttcgtgt gttttgtttt ctactttgat catttccatc acatctgccc
    25681 acaatttgct ggttgcaggt gttacttcag ctaggaaaga ctcatcaccc tcataaggtg
    25741 tgtagttttt ttggataaaa tcacgtacat ttacttcagt ttgccactcg cctgcggcaa
    25801 aaccttccca cgctttttgt tgagcgtctg ttagttgagt cattttaagt cctctgtgtt
    25861 agtaagttaa aacgggaaag cggtgatttt ttgcaaaaaa tttgcaaaat ttgaccgctt
    25921 gaatctgaaa tcttaatgct ttctaatgta taagaaccac tgcattaaac caatgaaaaa
    25981 cacgccaccg acaatattac ccagcgttgc cggaattaag ttcttaaaca caaaatgaga
    26041 tacatctaaa tcggcaaatt gcgttgggtc aacattaatt gctgtccaaa attcagggct
    26101 ggcaaagtgc gaaatcgcaa tccccatcgg aatcataaac atatttgcca cacagtgttc
    26161 aaagccggaa gccacaaaca ttgcaatcgg taacatcata ataaaggctt tatcggttag
    26221 gcttttacct gcataagaca tccacaccgc aatgcacacc ataatgttac agaaaatgcc
    26281 taaacagaaa gcctcaaacc attggtggtg aattttgtgc tgtgcggtat ttaaaataac
    26341 caaaccccat tgccctttgg ctgccataat ctgaccacta aaccaaatca acaatacaat
    26401 ggaaatcgcc ccaacaaagt taccgaaata caccactacc cagtttttaa acatctgtaa
    26461 ccagttaatt ctttggctgg ctctggctac aatcgtaagt gttgatgagg taaaaagttc
    26521 tgccccaaac accacacaca taatcacgcc gagtgaaaat accaaaccac caatcagttt
    26581 agccataccc caaggcattt ggctcgcacc cacttgggtt gtggtataaa atacaaatgc
    26641 tattgcaata aaaccgcccg cagtaatggc agagagaaag gaatataatt gattttttgt
    26701 tgctttataa accgcaccat cttctgcgat ttttgccatt tcagcaggag aaaacatcag
    26761 acaaccttaa caatgagaat tgaaaaaccg ata
//
LOCUS       DANLXO010000024        26753 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.024, whole genome shotgun sequence.
ACCESSION   DANLXO010000024 DANLXO010000000
VERSION     DANLXO010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 26753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26753
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.024"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            96..821
                     /gene="fadR"
                     /locus_tag="PXD69_000845"
     CDS             96..821
                     /gene="fadR"
                     /locus_tag="PXD69_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HDL6283061.1"
                     /translation="MGHSDILKAQSPAALAEEYIVKSIWNNHFPAGSDLPAERELAER
                     IGVTRTTLREVLQRLAREGWLSIQHGKPTRVNDIWETSGPNIIGTIIKLDKSYLPVVI
                     ANVVSLRTRMAEAYIPEAIYLAPEESAKLFDGLDELENTAAAYAEFDYKLFRQFTFLA
                     NKPVYALILNSFKSMYHQVAKIFFADENNRQLTLSFYRSLLCTCLAKDSEKAAACMAK
                     NRQSSGEIWQKLSANIPESFGQL"
     gene            836..1906
                     /locus_tag="PXD69_000846"
     CDS             836..1906
                     /locus_tag="PXD69_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDL6283062.1"
                     /translation="MNEIIFSLEPQDNARLQSLCGAFDEHLALIEKSFNLIIARTGFN
                     FTIQSEDDNHYSATLVQNSVKLIKQLYNETAPIKGKIKELDLEDIHLAIQESRMLLQN
                     QWQAGSQGEIAIKTKRGVIKPRSEHQQAYLRNILSHDISFGIGPAGTGKTFLAVAAAV
                     ESLERQEIRRILLTRPAVEAGEKLGFLPGDLGQKIEPYLRPLYDALFEMLGFEKAQKL
                     MERGVIEIAPLAYMRGRTLNDAFIILDESQNTTTEQMKMFLTRIGFNSKAVITGDITQ
                     VDLPRSQKSGLKHAMEVLKEVPELSFNFFDSKDIVRHPVVAKIVQAYDAWEAVDEERK
                     EQRKLEKLALEQEKILAQAEML"
     gene            complement(2032..4038)
                     /gene="tkt"
                     /locus_tag="PXD69_000847"
     CDS             complement(2032..4038)
                     /gene="tkt"
                     /locus_tag="PXD69_000847"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDL6283063.1"
                     /translation="MTERKVLANAIRFLSMDAVQKANSGHPGAPMGMADIAEVLWRDF
                     LKHNPTNPKWADRDRFVLSNGHGSMLIYSLLHLTGYDLSIEDLKQFRQLHSKTPGHPE
                     YGYAPGVETTTGPLGQGITNAVGIAIAEKTLAAQFNREGHKIVDHYTYAFLGDGCLME
                     GISHEACSLAGTLGLGKLIAFYDDNNISIDGHVDGWFTDDTAQRFESYGWQVIRNVDG
                     HNPEQIKFAIENAQAETERPTLIICKTIIGYGSPNKSNSHDCHGAPLGDAEIQAAREF
                     LGWEHAPFVIPAEIYTEWDAKAKGTLAEKDWNAKFAAYEAAYPELAAEFKRRYAGELP
                     ANWEAESKAFIEKLQANPATIASRKASQNAIEAYAPILPEFLGGSADLASSNLTLWSG
                     SKPIRAEHNVDGNYINYGVREFGMSAIMNGIALHGGFIPYGATFLMFYEYAHNAVRMA
                     ALMKQRALFVYTHDSIGLGEDGPTHQPVEQTASLRQIPNLETWRPADQVESAVAWKAA
                     VERKDGPTALIFTRQNLAQQQRTAEQLANISRGGYILRECCEKGSCPDLILIATGSEV
                     DLAMKAADVLDAEGVKVRVVSMPSTNVFDKQDEAYRESVLPRSVTKRVAIEAQLADFW
                     YKYVGFDGRIVGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL"
     gene            4396..4608
                     /gene="rpmE"
                     /locus_tag="PXD69_000848"
     CDS             4396..4608
                     /gene="rpmE"
                     /locus_tag="PXD69_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDL6283064.1"
                     /translation="MKQGIHPEYKEITATCSCGNVVKTRSTVGKDLNLDVCGNCHPFY
                     TGKQRVVDTGGRVERFNKRFSIPSSK"
     gene            complement(4663..5718)
                     /locus_tag="PXD69_000849"
     CDS             complement(4663..5718)
                     /locus_tag="PXD69_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL6283065.1"
                     /translation="MKSLVIKLFGTKKEKKTFKFSKIESVLLKPIGDAIGDAVVHIAH
                     LEQIKKALPNVKIAVLVTSRNKLIFSQANVVDMILEDKVSTYLSQRGHWDLYLDFKPT
                     FTTKSIILDSILKPKFIINFGKKQKSIYNLDTVKNYDFTTVFPKQVHFADYLNYAIFA
                     DFLEKNQVNYNLNIPNELSSFANTLWQEKKIRLLLNPQGSMREISTQELSELLSMIDK
                     RYVQHISCLLTNTTNSAEYLSKIKAPFEISLAPNSDILGYCALVNSADIVIAVDGGGV
                     HISCALGKKLLSFYANHPANIARWYPKPKKDVETFMVIADKWTEDNNDTRGFSLVAPA
                     KWLNHQFAKLIEKYTAC"
     gene            5766..6797
                     /locus_tag="PXD69_000850"
     CDS             5766..6797
                     /locus_tag="PXD69_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL6283066.1"
                     /translation="MNIKATLRKARLVIGKAILDSKNTDLILSEIPNKILFLRHDGKI
                     GDYVVSSFVFREIKKQSPQTQIGVVCSQKNRYLFENNPYIDKLYLVKTKSIPDYIRGG
                     KQLAKEQYDVVIDPTVTLRNRDLLFLRTISAKHYVGYQKQKYRLFDLNVEDRKQHFSE
                     IYQDALALIGFENIETQYDVPLNATSNQSIKHYLYENQIRNYIALNLFGAGSARRFSE
                     QKINELLSCLKQHSDKPIVLLTFPEVTAKLCSFTKKYKNIFVYEKTKSVFDSIELIRF
                     ADLLISPDTATVHIASGLSKKIIAFYSSDEQNFIHWHPNNQAETHILRFRKSVNDLDF
                     AAIKPEWLK"
     gene            6799..7689
                     /gene="ilvY"
                     /locus_tag="PXD69_000851"
     CDS             6799..7689
                     /gene="ilvY"
                     /locus_tag="PXD69_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HDL6283067.1"
                     /translation="MDFQSLKLFLDIAQSRSFIRSAEKNYMTASTLTRHIQRIEEELG
                     QPLFLRDNRQVRLTEAGERFLAFAQQGWAEWQQLQNQLSPAQGDLEGELKVFCSVTAS
                     YSHLPPILGKFRQKYPKVDIKLSTGDPALALEQVQSLAADISVAGKPEFLPNNIVFHY
                     IDDIQLSIIAPRVASQATQFLQQSPIDWKNIPFILPVNGPVRKRIDRWFKEQKIKDPI
                     IYATVSGHEAIVPMVALGFGVALLPDIVIKHSPMNNQVSYVNLPSPITPFELGICVQQ
                     KRLQEPIINAFWQLLSDNSA"
     gene            complement(7823..10225)
                     /gene="lon"
                     /locus_tag="PXD69_000852"
     CDS             complement(7823..10225)
                     /gene="lon"
                     /locus_tag="PXD69_000852"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDL6283068.1"
                     /translation="MAPRKKKAIELPLLPLRDVVVFPYMVMPLFVGREKSIQALRSAM
                     DSNKQLFLVTQQDPNKEEPNAEDMYGVGVIANIIQMLNLPDGTVKVLVEGQTRAKIEQ
                     IHDDENGFWAAIQPIYSEYDDENEELKAIAKTTLTEFENYVKNNKKIPAEIIAKLQKI
                     TLEDRLADTIASNLIAPVKKKQELLEQPNLIARFEALLIAMATEMDTLETETRIRNRV
                     KQQMEKNQRDYYLNEQIKAIQKELGNGDDVEQSELDKLKEKIDAAKLPTEVKDKLNTE
                     FKKLKAMPQSSSEATVVRGYIDWILQMPWHKKSAVKKDLAQAQEILDKDHYGLERVKE
                     RIVEYLAVQSRLNKLKGPILCLVGPPGVGKTSLGQSIANATGRKYVRMALGGVRDEAE
                     IRGHRRTYIGSMPGSLMMKMAKVGVRNPLFLLDEIDKMAQDMRGDPASALLEVLDPEQ
                     NKAFNDHYLEVDYDLSDVMFVATSNSMNIPPALLDRMEVIRLSGYTEDEKMHIARGHL
                     LAKQQENNGLKEGELTIEDSAILSIIRYYTREAGVRSLEREIAKICRKAVKALVLDKK
                     LKSITVSEKNIEEYLGVKRFDYGKMDSQNRIGEVTGLAWTEVGGDLLTIETASVAGKG
                     KFSYTGSLGDVMKESIQAAMVVVRSRAEKLGIAEDFHEKRDIHVHVPDGATPKDGPSA
                     GIAMCTALISSLTGNPVRKEVAMTGEISLRGKVLPIGGLKEKLLAAHRGGITTVIIPK
                     ENEKDLEEIPENAKAALDIHAVETIDEVLALALENPPMGIEILSKAEIKVKKSRAKAT
                     VQ"
     regulatory      10429..10547
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            10723..11820
                     /gene="ribD"
                     /locus_tag="PXD69_000853"
     CDS             10723..11820
                     /gene="ribD"
                     /locus_tag="PXD69_000853"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDL6283069.1"
                     /translation="MTDVQYMAYAITLAEKARGWTSPNPLVGCVIVKNGNIIAEGYHQ
                     KAGSWHAERNAILNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRD
                     PNPLVSGKGAAQLRAAGIEVVEDFMRTECDALNPIFFHYIQTKRPYVLLKYGMTADGK
                     IATYTGNSKWITGEAARANVQKSRHEYSAIMVGVETVLADDPMLNSRMENAKQPVRIV
                     CDSQLRTPLDSQLVQTARQYRTIIATLNNDAKKQAEYTACGVEILVTGERDKRVDLAD
                     LLQKLGELGIDSLLIEGGSQLNFSVLEQGLVNRVHCYIAPKLIGGKAAKTPIGGKGIG
                     ELAQAVKLRLKSTELLGEDILLDYEVDLLRN"
     gene            12037..12684
                     /gene="ribE"
                     /locus_tag="PXD69_000854"
     CDS             12037..12684
                     /gene="ribE"
                     /locus_tag="PXD69_000854"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDL6283070.1"
                     /translation="MFTGIIEEVGQIAQIKKQGEFVVVTVKAKKILTDVHLGDSIAVN
                     GVCLTVTSFTQEQFTADVMSETLKRTSLGELSINSSVNLERAMAANGRFGGHIVSGHI
                     DGTGVVAEITPADNSTWYRIKAEPKLMRYIIEKGSITIDGISLTVVDVDAESFRVSII
                     PHTIKETDLGTKKIGSLVNLENDIVGKYIEQFLLKKEPENPQSKITADFLKNAGF"
     gene            12703..13902
                     /locus_tag="PXD69_000855"
     CDS             12703..13902
                     /locus_tag="PXD69_000855"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HDL6283071.1"
                     /translation="MFKFSTVEEAIQAIAQGKIILVSDDADRENEGDFICAAEFATPE
                     NINFMAKYGKGLICTPISTEIAKKLNFHPMVLENEDNHQTAFTVSVDHIQTGTGISAF
                     ERSLTCLKMLDENAKPEDFRRPGHVFPLVAKDGGVLVRNGHTEATVDLARLAGLKPAG
                     LCCEIMAEDGTMMQMPELQAFAQAHNMPFITIQQLQEYRRKHDSLVNVVSVVKMPTKY
                     GEFKAHSFVETISGKEHVALVKGDIGDGENVLCRIHSECLTGDAFGSQRCDCGQQFAA
                     AMNQVEQEGRGVVLYLRQEGRGIGLINKLRAYELQDRGMDTVEANLALGFKDDEREYY
                     IAAQMFEKLGVKSIRLLTNNPAKIEGLIEQGLNVVAREPIMVEPNEHDLEYLKVKQHK
                     MRHMFNF"
     gene            14108..14572
                     /locus_tag="PXD69_000856"
     CDS             14108..14572
                     /locus_tag="PXD69_000856"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDL6283072.1"
                     /translation="MATFQGNYIATGLKFGIVATNWHKIFIDQLLNGATDKLLRHGVE
                     EKNIDTVWVPGALEISIAAKKMAQSGRYDAIICLGAVVRGATSHYDVVVNESAKGISS
                     SALETGVPIINGILTVENLEQAIERSGTKAGNKGEECAMVAIEMANLLKALA"
     gene            complement(14618..16126)
                     /gene="lnt"
                     /locus_tag="PXD69_000857"
     CDS             complement(14618..16126)
                     /gene="lnt"
                     /locus_tag="PXD69_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDL6283073.1"
                     /translation="MNFAKNPPFLTACLLAIILGAIGTFAYSPFDIWILAFASAAGLV
                     WSATLANRKTALWATFAWSIGYFCTGVNWVSVSMTQFGGVPTIVSYIAVFLLACYLAI
                     YNLLFSVVSHRLKLNNPFALAAIFTFTEYLRGVVFTGFPWLQFGYSLIDSPFAGIAPI
                     LGVEGLTFLVIVASSYLVKIIQQENKTVPSLMVLAVIFGLSFATRFLQFVQIDTEKQP
                     LVVSLVQGNIEQKMKWDPQHFNHSVRTYEQLILPLLGNSELIILPESAIPALENQISP
                     LLGSLDHLARQHGSEIIIGTLYQNEQEELFNSSVLLGEKEREYALHSNPRYNKHHLVP
                     FGEYVPFGSVLDWMREVFILPINLSQGSFVQPSFLAKNNRFNMAICYEIIFGDQLQQN
                     QKSQNSDYLLTITNDAWFGSSIGPWQHFQMARMRALELGKPLLRAANTGITAIVDANG
                     KVIEQLPQFTADALTATIVPTKGDTPFKQLGHWLIYSFSLFCVIASLLLRRK"
     gene            complement(16185..17084)
                     /gene="corC"
                     /locus_tag="PXD69_000858"
     CDS             complement(16185..17084)
                     /gene="corC"
                     /locus_tag="PXD69_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249295.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HDL6283074.1"
                     /translation="MSDEQQSVNTTEKSEKKSILHSLFSGLFQNEPKNREDLVEVIRD
                     SVENELIDSDTKEMIEGVMEISELRVRDIMIPRAQIVFIDANEPLDVCIDLIIESAHS
                     RFPVIRGEKDTIEGILHSKDLLKYLRSDSEPFNLQQVLRPAVIVPESKRLDRMLKEFR
                     SERFHMAVVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEVKPIRQLSRHTYAVLPL
                     TDIKKFNEFFATDFNDEEVDTIGGLVMQAFGYFPKRDEQIELNGIDFKVTSANSRQLI
                     QLRVTLSDEQLEKMEKTSPNEEE"
     gene            17222..17830
                     /locus_tag="PXD69_000859"
     CDS             17222..17830
                     /locus_tag="PXD69_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HDL6283075.1"
                     /translation="MKLTKIALSLTALVVSSMSVAGTLSTSSMVDILAFDGQRVKSGT
                     TSVQMSENKTHQVVVEVGGTVEGDFFTSDQIILTFQGSAENAKLETPRLNSKLDLRKF
                     QENQTVAIKTDSGKVISHKQDFLKGEGFLAKTRVEDNLTKYNLAKKTASVEQFATAPL
                     EAKGQIVVDTNKVSQEELQLLFRKADKDTQKRFLEWAKKNIK"
     gene            complement(17911..18294)
                     /locus_tag="PXD69_000860"
     CDS             complement(17911..18294)
                     /locus_tag="PXD69_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283076.1"
                     /translation="MKTLKLGCIFSLALMLSSCTLTPEQQAERKAKQIRAEQDLQVQL
                     AKQCDVETAELMYQQFNPPLSQTEQEEKAFKKRYAEKVNAPMFQACYKLAWQNYKAQV
                     ELEEIRWNYDRDYMYRGWRYCYYCW"
     gene            complement(18324..18893)
                     /locus_tag="PXD69_000861"
     CDS             complement(18324..18893)
                     /locus_tag="PXD69_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDL6283077.1"
                     /translation="MNETTINDFSLLCRLFGNLFYRHPTDPILAGTFNWLAQGGLRQV
                     WALNTDSQSENALTLLQKNANPTQLAASYQALFAENGAISPTISAYGLSVNNFVAFRQ
                     ERAMPELENADHIGLLFLTASWIEDNLDSALAQKILFEQFLLPCAGKFLGKIEAFDNG
                     FYKALAQLSRDALSAMADELEESELEAVE"
     gene            18952..19797
                     /gene="nfo"
                     /locus_tag="PXD69_000862"
     CDS             18952..19797
                     /gene="nfo"
                     /locus_tag="PXD69_000862"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDL6283078.1"
                     /translation="MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWQAPAL
                     KAETIEKFKRFCKVHHFSAEQILPHDSYLINLGNPEAEALEKSRVAFIDEMSRANQLG
                     LKLLNFHPGAHLKQISEQDCLARIAESINIAVEKVPNVIAVIENTAGQGSNLGWHFDH
                     LATIIEQVEDKSRVGVCLDTCHLFSAGYDISSYEKSEAVFNDFNQTVGFHYLRGMHLN
                     GSKTPLGSRVDRHHTLREGTIGTEVFAFIMQNMHFNHIPMILETISPEIWADEIKFLR
                     TLELK"
     gene            19925..20497
                     /locus_tag="PXD69_000863"
     CDS             19925..20497
                     /locus_tag="PXD69_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6283079.1"
                     /translation="MKKNLFATTFKPVFIASILSVFGGYSSIAVASLSSKPATPNQII
                     ASKAERLAKSSSVFTNRANLPTSSAHTANYSGRINSVYHNWVGTRYRLGGTTKAGIDC
                     SAFVREVMGKAFSKDMPRSTAEQRHVGHSISKSDLRPGDLVFFRKNNHVGVYIGNGKF
                     VHASSSRGVTTSSLSESYWSRNYTQSRRVI"
     gene            complement(20564..21022)
                     /locus_tag="PXD69_000864"
     CDS             complement(20564..21022)
                     /locus_tag="PXD69_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6283080.1"
                     /translation="MASIRQISDQTAAYQPIPLYRDFNSSRSVKLDLNSLCIKRPRDT
                     FFIHVKNPNLIAWGIELDDLLIVEQTNQYLVNDLLVLEKDGEYKFYQFFNEIQNGEGI
                     AEKILFSLDVSESNLRITDWAEVKIAGVITNVVHQMRTRGAFTQAKQRVA"
     gene            complement(21196..21579)
                     /gene="grcA"
                     /locus_tag="PXD69_000865"
     CDS             complement(21196..21579)
                     /gene="grcA"
                     /locus_tag="PXD69_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HDL6283081.1"
                     /translation="MIKGVQITESSNSNLLNSFWLLDEAKNEARCLAAKAGFEEDQVV
                     AISELGDIAYREVPVNVAPTIKVEGGQHLNVNVLRRETLEDAIQNPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVITRTFTESL"
     gene            21738..22427
                     /gene="ung"
                     /locus_tag="PXD69_000866"
     CDS             21738..22427
                     /gene="ung"
                     /locus_tag="PXD69_000866"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDL6283082.1"
                     /translation="MKTWTEALGEEKQKAYFQQILQYVHNERLAGKVIYPPQNEVFSA
                     FALTEFSDVKVVILGQDPYHGPNQAHGLAFSVKPPVAPPPSLVNMYKELSEDIEGFQI
                     PPHGYLIDWAKQGVFMLNTSLTVEQGRAGSHSQIGWEIFTDKVIAQLNQHRDNLVFLL
                     WGSHAQRKGQFIDRNRHCVLASPHPSPLSAYRGFFGCKHFSKANNYLISQGISPINWQ
                     LSVDVSYSSTH"
     gene            22443..23363
                     /locus_tag="PXD69_000867"
     CDS             22443..23363
                     /locus_tag="PXD69_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDL6283083.1"
                     /translation="MNFDLPIVSIAFVVLVLVALSSTIKIVPQGYHWTVERFGRYTKT
                     LSPGLNIVVPFIDRIGRKMNMMEQVLDIPSQEVISRDNASVAIDAVCFVQTVDARRAA
                     YEVNHLEQAIVNLTMTNMRTVLGSMDLDDMLSQRDLINGRLLSIVDEATNIWGVKVTR
                     IEIRDVRPPKELVAAMNAQMKAERNKRADILEAEGIRQAEILRAEGEKQSRILKAEGE
                     RQEAFLQAEARERAAEAEAKATQMVSEAIAKGDTTAINYFIAQKYTEALKEIGSSDNS
                     KVVLMPLEAGNLIGSVAGIAEILKSNKTSS"
     gene            23399..23836
                     /locus_tag="PXD69_000868"
     CDS             23399..23836
                     /locus_tag="PXD69_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HDL6283084.1"
                     /translation="MDWFFNWIGWSILGFVLLALELVLPGVFIMWWGFASLILAFIVA
                     LFTLGQALQIALFAIIATIFSLIWWKYQHGKDKKEDQSSSLNSREHAMLGAQGFVVEI
                     LPNGIARGKFGDTTWRVIGNNLQVADKIEVQKVEGITLFVRKQ"
     gene            complement(23977..26613)
                     /locus_tag="PXD69_000869"
     CDS             complement(23977..26613)
                     /locus_tag="PXD69_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL6283085.1"
                     /translation="MDEGFMVKHPRHSSHLHPLIHQLTTPEGEVRIYDASYPQFEVNP
                     VEKEDGIDLIPSLETHGAGVAGIIAAQADKTLGDGYSGGIAKGAELYVATKSYKRTLE
                     KVIQDAKKELENAKDEEDEKTPSLDQMAKNDLLASKEKEMAIERAEWASGLNKLLDNN
                     VFAINNSWNPFSISDDINVVDKFYQSIKQNKHNPLLQAIMRAKNSNTLLVFAAGNESK
                     KQPGVMALLPRYFPELEKNLISAVAVDKEQKIASYSNHCGASKNWCVAAPGDLHVLIG
                     VADEHKKPQYGLTKEQGTSFSAPAITASLAVLKERFDYLTATQIRDTLLTTATDLGEK
                     GVDNVYGWGLINLKKAVNGPTQFLNDETITVTRDDHWSNPLASQFKITKKGDKSLHLD
                     GENHLDTVAVEEGRLALNGKTKVKTISNHANLAVNGTEVEQNYSSSGQSQLEVLGKSG
                     LIANAQANIHLAGSLKIDDKLTEKTEAGDVSATVVQLKDKATYQGGFTQLVENENLAK
                     RGLIQDLYFKESEIIAKVNKPLTDEKADTNGQAGLALLNALRTTPIAYRRSWYNGWLQ
                     SALEQRKLDNLHYAVSNNIYADSLELLRSQNAKGLTQAQQHLFTAYHTPLQTTVWAEH
                     LNQKQSASSKHTDVKHHQSQLGVNHKLADKTVLSATLSQQKNRLEKPFAQATLKQTAL
                     NIGLRYHLDNAWFSEATLQFARQKYQQSRRFASHQLGTAETRGSTLGGEMRIGYQFMP
                     NQWIIEPSLGVQWIQTKMNGLNESGELATQTAAMRYRDVNIVPSVKLQRTFQLEQGSI
                     SPYIGLNYLHRLNGKITKITSNIAGKTLHSEATTKRNRQLNGEVGVKLHYKNWFTAMN
                     LDYSRVKSANLFGWKVNVGFSF"
BASE COUNT         7886 a         5130 c         5554 g         8183 t
ORIGIN      
        1 taatagtatt actgaacttt ttagtcgcaa taattgatta gaaataaaga atagttagat
       61 tttagataag catatttttt gcttgggggg cattaatggg tcacagtgat attttaaaag
      121 cgcaaagccc ggcagcgtta gcggaagaat atattgtaaa gagtatttgg aataatcatt
      181 tccctgccgg ctctgatctt cctgccgagc gagagttagc agagcgcatt ggggtaacaa
      241 gaacaacttt acgtgaagta ctacaacgtc tagcgcgaga aggttggtta agtattcagc
      301 acggcaagcc aacaagagtg aatgatattt gggaaacttc ggggcctaat attattggca
      361 ctattattaa gctagataaa agctatcttc cagtggtgat tgccaatgtg gtgtcattac
      421 gtactcgtat ggcggaggct tatattccag aagcgattta ccttgctcct gaagaaagtg
      481 ctaaactctt tgatggacta gatgaattag aaaatacagc agctgcttat gctgaatttg
      541 attataagtt attcagacaa tttacttttt tagccaataa gcctgtgtat gcgttgatcc
      601 taaatagctt taaatcaatg tatcatcaag tcgcaaaaat tttctttgct gatgaaaata
      661 atcgtcaatt aacgttaagc ttttaccgtt cattattatg tacttgtctt gcaaaagata
      721 gtgaaaaagc agccgcttgt atggctaaaa atcgccaatc tagtggtgaa atttggcaaa
      781 aattatccgc taatattcct gaaagctttg gtcagcttta acagaaggta gaattttgaa
      841 cgaaattatt tttagcttag aaccgcaaga taatgctcgt ctgcaatcgc tttgtggtgc
      901 atttgatgag catttagcct taattgaaaa aagttttaat ctcattattg ctcgaacagg
      961 cttcaacttt acgattcaat cggaagatga caatcactat tctgctacct tggttcaaaa
     1021 tagtgtgaag ctgattaagc aactgtataa tgaaactgcc ccgattaaag gcaaaattaa
     1081 ggaattggac ttagaagata tacatttggc gattcaggaa agccgaatgc tactacaaaa
     1141 ccaatggcaa gccggctcgc aaggcgaaat agcgattaaa accaagcgag gggtgattaa
     1201 acctcgtagc gaacatcaac aagcctattt acgaaatata ttaagccacg acatcagttt
     1261 tggtatcggg cctgctggca caggcaaaac ctttttagcg gtagcggcag cggtggaatc
     1321 gcttgaacgc caagaaatcc gccgtatttt acttacccgt ccggcggtgg aagccggtga
     1381 aaagctcggt tttttacccg gcgatttagg gcaaaaaatt gagccttact tacgcccgtt
     1441 atatgatgcc ctgtttgaaa tgcttggctt tgaaaaagct caaaagttga tggaacgtgg
     1501 tgtgattgaa attgccccac ttgcttatat gcgagggcgt actttaaacg atgcgttcat
     1561 cattttagat gaaagccaaa acacgactac cgagcaaatg aaaatgttct taacccgtat
     1621 tggctttaat tccaaagcgg tgattaccgg cgatattacc caagtggatt tgccccgtag
     1681 ccaaaaatca ggcttaaaac acgcaatgga agtgctaaaa gaagtgccgg aactcagctt
     1741 taatttcttt gacagcaaag atattgtccg ccaccctgtg gttgccaaaa ttgtgcaagc
     1801 ctatgatgcg tgggaagcgg ttgatgaaga gcgtaaagaa cagcgaaaac tggaaaaatt
     1861 agctttagag caagaaaaaa ttcttgctca agctgaaatg ttatagctta caagcggtca
     1921 tatttcgcta attttttgca aaaaatcgct gaaatttcac cgcttatcat aacagttgtt
     1981 caacaaaaaa gcgggaagtt aattcccgct tttctttatc ttattgtttc attataagat
     2041 ttcttttgct ttagcaacca cgttttcaac ggtaaagccg aagagtttga ataattgatc
     2101 tgctggtgcg gattcaccaa agctattcat acctacaatt cgaccatcaa agccgacata
     2161 tttataccag aagtcagcta attgagcttc aatcgccaca cgtttagtga ctgaacgtgg
     2221 taataccgat tcacgatagg cttcatcttg tttgtcaaac acgttggtgc ttggcattga
     2281 aactacacgc actttcacgc cttctgcatc taacacatca gcggctttca ttgctaaatc
     2341 tacttcagaa ccggttgcaa ttaagattaa atccgggcaa ctgccttttt cgcaacattc
     2401 acgcaagata tagccaccac gagagatgtt cgctaattgc tccgcagtac gttgttgttg
     2461 agccagattt tggcgggtaa agattagtgc tgtcgggccg tctttacgtt ctaccgccgc
     2521 tttccaagca acagcagatt ctacttggtc tgccggacgc caggtttcta agtttggaat
     2581 ttggcgtaat gaagcagttt gttctaccgg ttggtgggtc gggccgtctt cacctaaacc
     2641 gatggagtcg tgtgtataaa caaataaggc acgttgcttc attaaggctg ccatacgcac
     2701 cgcattgtgt gcatattcgt agaacattaa gaaggttgca ccgtaaggaa tgaaaccacc
     2761 gtgtagggca atcccgttca taatcgcaga cataccgaat tcacgcacgc cgtagttgat
     2821 gtagttacca tctacattgt gttccgcacg aatcggtttt gagccagacc ataaggttaa
     2881 gttagagctt gctaagtcag ctgagccgcc gaggaattca ggtaagattg gcgcgtaagc
     2941 ttcgattgca ttttgtgatg ctttacggct tgcaatggtt gccggatttg cttgtaattt
     3001 ttcaataaaa gctttgcttt cagcttccca gttagccggt aattcgcctg cgtaacggcg
     3061 tttaaattca gcggctagtt cagggtatgc cgcttcataa gcagcaaatt tagcgttcca
     3121 atctttttct gctaatgtac cttttgcttt tgcatcccac tctgtataaa tttcagctgg
     3181 aatcacaaat ggggcatgtt cccaacctaa aaattcacga gcggcttgga tttcagcatc
     3241 acccaatggc gcaccgtggc aatcgtgaga gtttgattta tttggtgaac catagccgat
     3301 aatggtttta caaataatta aagttggacg ctcggtttcg gcttgtgcat tttcaatcgc
     3361 aaatttgatt tgttctgggt tatggccatc gacattacgg ataacttgcc agccataaga
     3421 ctcaaagcgt tgtgcggtat catcagtgaa ccaaccatca acgtggccgt cgatagagat
     3481 attgttatca tcgtagaaag caatcagttt gcctaagcct aatgtaccgg cgagagagca
     3541 agcttcgtgt gagatacctt ccattaaaca gccatcgcct aagaaagcgt aagtgtagtg
     3601 atcgacaatt ttatgacctt cacggttaaa ttgtgctgca agggtttttt ccgcaatcgc
     3661 tataccgacc gcattggtaa taccttgacc taacgggcct gtggtggttt caacacccgg
     3721 tgcataacca tattcagggt gaccaggtgt tttagaatgt aactgacgga actgttttaa
     3781 atcttcaata gagagatcat agccggttaa atgaagtaag ctatagatta acattgaacc
     3841 gtgtccgtta gacagaacaa aacggtcacg atctgcccat ttaggattag ttggattgtg
     3901 ttttaaaaaa tcacgccata aaacttctgc aatatcagcc atacccattg gtgcgcctgg
     3961 gtggcctgag ttagcttttt gtacagcatc catacttaaa aaacgaattg cattcgctag
     4021 cactttacgt tctgtcattt gtgttactcc taatcgagaa tgttatataa aatggaaagg
     4081 atatcgaatt ggattctaca ctattttgct agaaaaactc aaaaatggaa atgagaaatg
     4141 tgatctgtat cacaaaaaat gattaaattg tgatttgttt tgattggatt ttaatagacg
     4201 gttttttcct aatacaatat tttcttgata aagcgaatgt ttagtagttg atctaggcaa
     4261 caaatttatc taaaatacgc actctttttg gcgttgagca tttgctcaac atttttatta
     4321 attacatatg gtacctatca gcggtagaga ttctaacaag ataggcggcg atatggcttc
     4381 ttatgaggtt ccccaatgaa acaaggtatt cacccagaat ataaagaaat tacggcaact
     4441 tgctcttgcg gtaatgtagt taaaactcgc tcaacagtgg gtaaagattt aaacttagac
     4501 gtatgtggca actgccaccc gttctatact ggtaaacaac gtgttgttga caccggtggt
     4561 cgtgttgaac gctttaacaa acgtttcagc atcccaagct caaaataatt tgattattgc
     4621 aaaccccgct aatgcggggt tttgtttttc ttatatatcg aattaacaag cggtgtattt
     4681 ttctatcaat tttgcaaatt ggtgatttaa ccattttgca ggagctacca gagaaaaacc
     4741 tcgagtatca ttattatcct cggtccattt atctgcgatc accataaaag tttcaacatc
     4801 tttcttaggt tttggatacc agcgtgcaat attagctgga tgattggcat aaaatgagag
     4861 caatttcttg cctaatgcac aagaaatatg gacaccacct ccatcaactg caattacaat
     4921 atcagcagag tttactaatg cacaataacc taaaatatca ctattaggtg ctaggcttat
     4981 ttcaaatggg gctttaattt tcgacaaata ttcggcacta ttggttgtat tggtcagcaa
     5041 acaactaata tgttgaacat atcttttatc aatcatagat aatagctctg ataattcttg
     5101 agtagaaatt tcacgcatac taccttgagg attcaatagt aatcgaattt tcttctcttg
     5161 ccatagcgta tttgcaaaac tgcttagttc attaggaatg tttaaattat aattgacctg
     5221 atttttttct aaaaaatcag caaaaatagc atagttgaga tagtcagcaa aatgaacctg
     5281 ctttggaaag acagtggtga aatcgtaatt ttttactgta tctaaattgt aaatactttt
     5341 ttgtttttta ccgaagttaa taataaattt aggctttaaa atactatcta aaataatact
     5401 ttttgtggta aatgtcggtt tgaaatctaa ataaagatcc caatgtcccc gctgcgagag
     5461 ataagtggat actttatctt ctaagatcat atctaccacg tttgcttgag agaaaatcaa
     5521 tttgttacga gatgtaacta aaaccgctat ttttacattt gggagagctt ttttaatttg
     5581 ctccaaatga gctatatgca caacagcatc gccaatagca tctccgatag gtttgagtaa
     5641 tacggattct attttgctaa atttgaaggt ttttttctct ttttttgtac caaaaagttt
     5701 tataactaag gatttcatct ctataatagg ttgattcttt taatgattgg ttatagtaag
     5761 taaaaatgaa tattaaagca acgttaagaa aagcaagatt ggtgataggt aaagccattt
     5821 tagatagtaa aaatactgat ctgatattat cggaaattcc caataaaatt ctatttcttc
     5881 gtcacgatgg taaaattggt gattatgtcg ttagttcctt tgtcttccgt gaaataaaaa
     5941 aacagtctcc ccaaacgcaa ataggcgtgg tttgctcaca gaaaaaccga tatttatttg
     6001 agaataatcc ttatattgat aagctctatt tggttaagac aaaaagtatt cctgattata
     6061 ttcgtggtgg caaacaactt gcaaaagagc agtatgatgt tgtaatcgat ccgactgtta
     6121 ctttacggaa tcgtgatctc ttatttttac gcactatatc agccaaacat tatgtaggtt
     6181 atcagaaaca aaaatatcga ttatttgatc taaatgtaga ggatagaaaa cagcattttt
     6241 cagagattta tcaagatgcg ttagctttaa tcgggtttga aaatatagaa actcagtatg
     6301 atgtgccact aaatgccaca agcaaccaat ccataaagca ttatttatat gaaaaccaaa
     6361 ttagaaatta tattgcgtta aatctttttg gtgcaggttc ggcaagacgt tttagtgagc
     6421 agaaaattaa tgaactgctg agttgcttaa aacagcatag tgataaaccg atagtcttac
     6481 ttacttttcc tgaagtaacg gcaaaattgt gttcctttac taagaagtat aaaaatatat
     6541 ttgtctatga gaaaaccaaa agcgtttttg attcaataga actgattcgt tttgcggact
     6601 tattaatttc acctgatact gcaaccgtgc atattgcctc aggcttgagt aaaaagataa
     6661 ttgcttttta cagtagcgat gaacagaatt ttatacattg gcatccgaat aatcaggctg
     6721 aaacccatat tctccgtttt agaaaaagcg tgaatgattt agattttgct gcaataaaac
     6781 cggagtggct aaaataatat ggacttccaa agccttaaac ttttcctaga tatagcccaa
     6841 agccgtagtt ttattcgcag tgcggagaag aattatatga cggcttccac acttacccgc
     6901 catattcagc gtatagagga ggagctcggg cagccgttgt ttctgcgtga taatcgacaa
     6961 gtgcgtttaa ctgaagcagg ggaaaggttt ttggcgtttg ctcaacaagg ttgggcagag
     7021 tggcagcagt tgcaaaacca gttgtcgcct gctcaaggtg atttagaagg agagttgaaa
     7081 gtgttctgct cggtaacggc ttcttacagc catttaccgc cgattttggg aaagtttcgc
     7141 caaaaatatc cgaaagtgga tattaaactg agtaccggtg atccggcttt ggcattggaa
     7201 caggttcagt cattggctgc agatatttcg gttgcgggta agccggaatt tctgccgaat
     7261 aatattgtgt ttcactatat tgatgatatt caactttcga ttattgcccc tcgtgtggcg
     7321 agccaagcca ctcaatttct gcaacagtcg ccgatagatt ggaaaaatat cccctttatt
     7381 ttgccggtga acggacctgt acgaaaacgg attgaccgtt ggtttaaaga gcaaaaaatc
     7441 aaagacccga ttatttatgc taccgtctcc ggacacgaag cgattgtgcc gatggttgca
     7501 ctaggctttg gggtcgcact gctaccggat attgtgatta agcatagccc aatgaataat
     7561 caagtttctt atgtgaattt accctcgccg atcactccgt ttgagctggg aatttgcgtt
     7621 cagcaaaaac gcttgcaaga gccgatcatc aacgcatttt ggcaattatt gtctgataat
     7681 tcagcataac aagcggttag attttgctaa atttttgcaa aaaatagagc aaaaccgacc
     7741 gcttgtagat aaaactttca gataaaaaat aaggtgcgtg attgtgatct gcgcacctta
     7801 tgttgtttta gattattgca ctttattgca ctgtggcttt agctcgcgat tttttcacct
     7861 tgatctcggc ttttgacaag atttcaatcc ccattggcgg gttttctagt gccagagcta
     7921 gtacctcgtc aatggtttct actgcgtgaa tgtccaacgc tgcttttgca ttttccggaa
     7981 tttcctctaa gtctttttca ttttctttcg gaataatcac cgtcgtaata ccaccacgat
     8041 gggctgccag taatttctct tttaagccgc cgattggcaa tactttgcca cgcaagctga
     8101 tttcaccggt catcgctact tctttacgca cagggttacc tgttaggctg gaaattaatg
     8161 cagtacacat tgcaatccct gcactcggac catctttcgg tgttgcaccg tccggcacgt
     8221 gaacgtgaat atcccgtttt tcgtggaagt cttcagcaat gcctaatttt tctgcacgag
     8281 agcgtacaac caccattgcc gcttgaatag actctttcat tacatcgcct aatgaaccgg
     8341 tgtaagagaa tttgccttta cctgcaacag aagcggtttc aatggttaat aaatcaccgc
     8401 caacttctgt ccacgctaaa ccggtcactt cgccaatgcg gttttggcta tccattttgc
     8461 cgtagtcaaa acgttttacg cctaagtatt cttcgatatt tttctcagaa actgtaatgg
     8521 attttaattt cttatccaat actaaagctt tcacggcttt acggcagatt ttcgcaattt
     8581 cacgctcaag gctacgcacg cctgcttcac gggtgtagta gcggataata cttaaaattg
     8641 cactgtcttc aatggtcagc tcaccctctt ttagtccgtt attttcttgc tgtttagcca
     8701 gtaaatgacc acgagcaatg tgcattttct catcttcggt atagcctgaa agacgaatca
     8761 cttccatacg gtcgagcaat gctggcggaa tgttcattga gtttgaggtt gccacaaaca
     8821 ttacatcgga taaatcgtaa tccacctcta aataatggtc gttaaaggct ttattttgct
     8881 caggatctaa cacttcaagc agagcagaag ccgggtcgcc acgcatatct tgagccattt
     8941 tgtcgatttc atctaacaag aacagcggat tacgcacgcc gactttcgcc attttcatca
     9001 ttaggctacc cggcattgag ccgatgtaag tacggcgatg cccacggatt tccgcttcat
     9061 cacgcacgcc acctaacgcc atacgcacat atttacgccc tgtggcattg gcaatagatt
     9121 gccctaatga ggttttacca acccccggcg gaccaactaa gcacaaaatc ggacctttta
     9181 atttatttag acgactttgc actgctaagt attctacaat ccgctctttc actcgttcta
     9241 agccgtagtg gtctttatcc aaaatctctt gagcttgggc taaatctttt ttgaccgctg
     9301 attttttatg ccacggcatt tgtaaaatcc agtcaatata accacgcaca acggtagctt
     9361 cggaagagct ttgcggcatt gctttgagct ttttgaactc cgtattcagc ttgtctttta
     9421 cctcggtcgg taattttgca gcgtcaattt tctctttaag cttatctaac tcgctttgtt
     9481 caacgtcatc gccattacct aactcttttt gaatcgcttt aatttgctcg ttgaggtagt
     9541 aatcacgttg gtttttttcc atttgctgtt taacacgatt acgaatccga gtttcggttt
     9601 caagcgtatc catctcagtt gccatcgcaa ttaacaaggc ttcaaaacgg gcaatcagat
     9661 ttggttgctc caataattcc tgttttttct tcaccggagc aattaagtta gaggcaatgg
     9721 tatccgccaa gcggtcttcc aacgtgattt tttgcagttt agcaataatt tccgccggaa
     9781 ttttcttgtt atttttaacg taattttcaa attcggttaa agtggtttta gcaatcgctt
     9841 ttaactcttc gttttcgtca tcatattccg aatatattgg ctgaattgcc gcccagaagc
     9901 cgttttcatc atcgtgaatt tgctcgattt tggcacgggt ttgtccttct accagcactt
     9961 taactgtgcc gtccggcagg tttaacattt gaataatgtt ggcaattaca cctacgccat
    10021 acatatcttc tgcattcggc tcttctttat ttggatcttg ctgagtgact aaaaacagtt
    10081 gtttattgga atccatcgcc gagcgtaggg cttgaattga tttttcacgt cctacaaata
    10141 acggcataac catataagga aaaaccacca catcacgcaa tgggagtagt ggtaattcaa
    10201 tcgctttctt ttttcttggt gccataaatt tgctctctct atcaaaatat aatcccccat
    10261 tatgagggcg aatttgggaa aaacaaggga aaatttgatt tatcttaaaa aaactcgaat
    10321 agtcaaaaca gtagatgttg gcgatttaat caattgttaa aatcagggta attagcttaa
    10381 tttcccgctt gacatcaaat cgtaatgcga gcaaaatccc ctgcatattt taatcttcag
    10441 ggcagggtga aattcccgat cggcggtaaa gtccgcgagc cgagcaatcg gcaggatttg
    10501 gtgaaattcc aaaaccgaca gtatagtctg gatgaaagaa gagtcaaaaa ccgcaaaaaa
    10561 taccgcacaa gcggtcattt tttgtgtctt ttttgcaagc cttgagtcgt gagatttcaa
    10621 ggcttcattg ttttgcaggc ggcgtttgca aattttttac taaaaacgac cgcttgtatt
    10681 gcaataatcc tttcattacg ccctcaattt atcaaaatgt atatgacaga tgttcaatat
    10741 atggcttatg ccatcaccct tgccgaaaaa gcacggggtt ggacaagccc taatccgcta
    10801 gttggctgtg tgatcgtgaa aaacggcaac attatcgccg aagggtatca ccaaaaagcc
    10861 ggtagttggc acgctgaacg caatgcgatt ttaaactgcg aggaagatct gacgggggca
    10921 accgcttatg taaccttaga gccttgttgc caccacgggc gaaccccgcc ttgttccgaa
    10981 ctgctgattg aacgtgggat caaaaaagtg tttatcggct ctcgagatcc gaacccactt
    11041 gtttctggca aaggagcggc acagcttaga gccgccggca ttgaggttgt ggaagacttt
    11101 atgcgaacgg agtgcgatgc gctgaacccg attttcttcc attacattca aaccaaacgc
    11161 ccttatgtgt tgctgaaata tgggatgacg gcagatggta aaattgcgac ttatacgggg
    11221 aattcgaaat ggatcaccgg cgaggctgcc cgagctaatg tacagaaaag ccgccacgaa
    11281 tatagtgcga ttatggtcgg ggtggaaacg gtgcttgccg atgacccaat gctcaacagc
    11341 cgaatggaaa atgctaaaca gccggtgcgg attgtatgtg acagccaact gcgtacccca
    11401 ttggatagcc aactagtcca aactgcacgc caatatcgca ccattattgc tacgctcaat
    11461 aatgatgcaa aaaagcaggc agaatatacc gcttgcggtg ttgaaatttt agtgacaggc
    11521 gaacgtgaca agcgggtgga tttagccgat cttttgcaaa agctgggcga actcgggatc
    11581 gacagcttat tgattgaagg tggttcgcaa ctcaatttca gcgtgctgga acaggggtta
    11641 gtcaatcgag tacattgcta tattgccccg aaactgattg gcggcaaagc ggcaaaaacc
    11701 ccgattggtg gcaaggggat tggcgagtta gcacaagcgg ttaaattacg tctaaaatcc
    11761 accgaattgc tcggagaaga tattttgttg gattatgaag tggacttgct tcgtaattaa
    11821 attgaaattt ccttactctc gcccgtttac gggagagaga cagcataaaa tttcgttcag
    11881 aaattttatg cagagagagg ggaaaatgag tgtaatcttc cctctccctc cgaaaatcct
    11941 acggattttc tcttccctct cccgtaaacg ggagagggga atagtaagat aagcagttct
    12001 cagactaaat tggaagtaaa tcggagaaaa atttaaatgt tcacaggcat tatcgaagaa
    12061 gttggccaga tagcccaaat taagaaacaa ggcgagtttg tggtggtaac ggttaaagca
    12121 aaaaagattc tgaccgatgt acatttaggg gatagcattg cggtaaatgg cgtgtgttta
    12181 accgtgactt catttacgca ggagcaattt actgctgatg ttatgtcaga aaccttaaaa
    12241 cgtacatcac ttggcgaatt aagtatcaac agctcggtta atcttgagcg ggcaatggcg
    12301 gcaaacgggc gttttggtgg gcatattgtg tcaggtcata ttgatggcac gggtgtggtt
    12361 gcagagatta caccagcaga taattcaact tggtatcgca ttaaagccga acctaagtta
    12421 atgcgttaca tcattgaaaa aggctcaatt actattgatg gcattagttt aacggtggtg
    12481 gatgttgatg cggaatcttt ccgggtatcg attattccgc ataccattaa ggaaaccgac
    12541 ctcggtacga aaaaaatcgg tagtttggtg aatttagaaa atgacattgt cggcaaatat
    12601 atcgaacagt ttttattgaa aaaagagcct gaaaatccgc aaagtaaaat tactgcggac
    12661 tttcttaaaa atgcagggtt ttaaccaaat aaaggacaaa taatgtttaa gttttcaacg
    12721 gtagaagaag caattcaagc aattgcacaa gggaaaatta ttttagtcag cgatgatgcc
    12781 gaccgtgaaa atgaagggga cttcatttgt gcagcggaat ttgcgacacc ggaaaatatc
    12841 aactttatgg cgaaatatgg taaagggttg atttgtacgc cgatttcgac agaaattgcc
    12901 aaaaaattaa attttcaccc gatggtgcta gagaacgaag ataatcatca aaccgcattt
    12961 accgtttctg ttgaccatat tcaaaccggc accggtattt ccgcttttga gcgttcatta
    13021 acttgcctga aaatgcttga tgaaaatgct aagccggaag attttagacg tccggggcat
    13081 gttttcccat tagtggcaaa agacggaggc gtattagtgc gtaacggtca taccgaagca
    13141 actgtggatt tagctcgttt ggcgggcttg aaaccggcag ggctttgctg tgaaattatg
    13201 gcagaagacg gcacgatgat gcagatgccg gaattacagg catttgcaca agcacacaat
    13261 atgccgttta ttactattca gcagttacaa gagtatcgta gaaaacacga cagcttggtg
    13321 aatgtggttt cggtggtaaa aatgccgacc aaatacggtg agttcaaagc acacagtttc
    13381 gttgaaacta tttcaggcaa agaacacgtc gctttagtta aaggtgatat tggtgatggc
    13441 gaaaatgtat tatgccgtat ccattccgaa tgtttaaccg gcgatgcctt tggctcacaa
    13501 cgttgcgatt gtggtcagca gttcgcagcg gcaatgaacc aagtggagca agagggcaga
    13561 ggcgtggtgc tttatttacg ccaagaagga cgtggcatcg gtttaattaa taaactgcgt
    13621 gcttacgaat tgcaagatag aggaatggac acggttgaag ccaacctggc attaggtttc
    13681 aaagatgatg agcgtgaata ttatatcgcc gctcaaatgt ttgaaaaatt aggcgtaaaa
    13741 tcgattcgtt tgttaaccaa taatccggca aaaattgaag gactcattga gcaaggttta
    13801 aacgtagtgg ctcgtgagcc gattatggtt gagccaaacg aacacgattt ggaatacctt
    13861 aaagttaaac agcacaaaat gcgacatatg tttaatttct aatccaatac tctctcccct
    13921 tgtgggagag agacagaaaa atacttcgtt cagaagtatt tttcagagag agggtatatt
    13981 ttttagaaaa agtttgcaat ttcccctctc cctgattttt cttctgaacg aagaaaaatc
    14041 tatccctctc ccacaagggg agagggttat tgagtatcaa atttatttta aagaaggaaa
    14101 acaaacaatg gcaacatttc aaggaaacta catcgcaact ggtttaaaat tcggtattgt
    14161 ggcaactaac tggcacaaga tttttatcga tcaactgtta aacggtgcaa ccgataaatt
    14221 attgcgtcac ggcgtagaag aaaaaaatat cgacaccgta tgggtgccgg gtgcattaga
    14281 aatctcaatt gcagcgaaaa aaatggcaca aagcggtcgt tatgatgcga ttatctgctt
    14341 aggtgcggtc gtgcgtggag caaccagcca ctatgatgtg gtagtgaacg agtcagcaaa
    14401 aggcatcagc tcttctgctt tagaaaccgg cgtgccgatt attaacggta ttttaacggt
    14461 ggaaaattta gagcaagcga ttgagcgttc aggcactaaa gccggtaata aaggcgaaga
    14521 gtgtgcaatg gtagcgattg aaatggcgaa cctattaaaa gccttagcgt aatcagcgat
    14581 aaaatcccct tagacccaag agcctaaggg gattttttta ttttctgcgt agtaacaggc
    14641 tggcaatgac acaaaatagg ctgaaactgt aaattaacca gtgacctaat tgtttaaacg
    14701 gcgtatcgcc tttggttggc acaatggtgg cagttagtgc atcagcagta aattgcggta
    14761 gttgttcaat tacttttccg ttggcatcaa caatggcggt aataccggta ttcgcagctc
    14821 gaagcaatgg tttgccaagt tctaacgctc gcattcttgc catttggaaa tgttgccaag
    14881 gcccgatgga agaaccaaac cacgcatcat tggtgatagt taataaataa tctgaatttt
    14941 ggcttttttg gttttgttgt aactgatcac caaaaataat ttcatagcaa atcgccatat
    15001 taaatcggtt gtttttcgcc aagaatgatg gttgaacgaa actgccttgt gaaagattaa
    15061 ttggtagaat aaacacttcc cgcatccaat ccagcaccga gccaaacggc acatattcgc
    15121 caaacggcac aaggtgatgt ttgttgtagc gagggttgct gtgcagggca tattccctct
    15181 ctttttcgcc taatagcacg ctactgttaa acagttcctc ttgctcattt tgatagagtg
    15241 tgccgataat aatttcactt ccgtgttggc gagctaagtg atcgagcgag ccaagcagcg
    15301 ggctgatttg attttcaagt gccggaatgg cggattcagg caaaataatc agttcactgt
    15361 tacctaatag gggcagaatg agctgttcgt aggttcgtac gctgtggttg aaatgttgcg
    15421 gatcccactt cattttttgc tcaatattcc cttgtactaa actcactaca agcggttgtt
    15481 tttctgtatc aatttgcaca aattggagaa agcgagtggc aaaacttaag ccaaaaatga
    15541 ccgctagtac catcaatgat ggcacagttt tgttctcttg ctgaataatt ttcactagat
    15601 agctacttgc aactattacc aagaaagtca aaccttcaac gcccaaaatc ggcgcaatac
    15661 cagcaaaggg gctgtctatt aagctatagc cgaattgtag ccacggaaaa ccggtaaata
    15721 ccacgcctcg taaatattcg gtaaaggtaa aaatcgcagc caatgcaaac ggattattca
    15781 gtttgagcct gtgtgaaact acactaaaca gcagattata aatagcgaga tagcacgcca
    15841 acaggaatac tgctatgtag cttactatgg taggaacacc accaaattgg gtcatactca
    15901 cagaaaccca gtttacaccg gtgcagaagt agccgataga ccaagcaaag gttgcccata
    15961 atgcggtttt tctgtttgcc agagtggctg accaaaccaa gccggctgcg gaagcaaagg
    16021 caagaatcca aatatcaaaa ggcgaatagg cgaaagtgcc gattgcaccc agtatgattg
    16081 caaggagaca agcggttaaa aaaggcggat tttttgcaaa attcataata actcactaaa
    16141 taaatgaggc acgccgaaac gtgccttgat tgaaactcac tatattattc ttcttcgtta
    16201 ggagaggttt tttccatttt ctctaactgt tcatcggaaa gtgtgactcg tagctgaatc
    16261 aattggcggc tattagctga ggtgacttta aaatcaattc cgtttaactc aatttgctca
    16321 tctcgtttcg ggaaataacc gaaagcctgc atcactaaac caccaatggt atccacctct
    16381 tcgtcattaa agtcggtagc aaaaaattca ttgaattttt tgatgtcggt gagcggtaat
    16441 accgcataag tatgtcttga aagctggcga attggtttga cctcttcttc atcaaactca
    16501 tcttcaatat cacccacaat ttgttcaaga atgtcttcaa tggtgactaa gcctgaaacc
    16561 gcaccaaatt catcaaccac tactgccata tggaagcgtt ctgaacggaa ctcttttagc
    16621 attcggtcta ggcgtttgct ttccggtaca ataaccgcag ggcgtaatac ctgttgcaga
    16681 ttaaagggtt cagagtcaga acgtaaatat ttcaataaat ctttagagtg aagaatacct
    16741 tcgatagtat ctttctcacc ccgaatcacc ggaaaacgag agtgtgcgga ttcaataatt
    16801 aaatcaatac agacatctaa aggttcattg gcatcaataa acacaatttg cgcacgggga
    16861 atcataatat cccgcactcg taattccgag atttccatta ctccttcgat catctctttg
    16921 gtgtcgctgt cgatcaattc attttcaaca gagtctcgaa tcacttcgac tagatcttca
    16981 cggtttttag gctcgttttg aaaaagcccg ctaaatagag agtgtaaaat cgattttttt
    17041 tctgattttt cggtggtgtt tacactttgc tgttcatcac tcatagtttg ttccacttaa
    17101 ataaagtacg cttataataa gcaaattcag tcacaaagca aataaaacat tgctattttc
    17161 actcaaatta gcataggata agcaaaaatc tttttatttc ttcatatttt aggagtttga
    17221 aatgaaatta accaaaatag cattaagttt aacagcctta gttgtcagtt cgatgagtgt
    17281 ggccgggacg ttaagtacat catcaatggt ggacatttta gcctttgacg ggcaacgtgt
    17341 taaatccggc acgacttcgg ttcaaatgag tgagaataaa acgcatcaag tggtagtgga
    17401 agtcggtggg acagttgaag gggatttttt cacctctgat caaatcattt tgactttcca
    17461 aggcagtgcg gaaaatgcaa aattagaaac gccaagatta aattcaaagt tagatcttcg
    17521 taaattccaa gagaatcaga ctgtggcaat taaaaccgat tcaggtaagg ttatttcaca
    17581 taaacaagat ttcttaaaag gggaaggttt ccttgcgaaa acaagagttg aagataattt
    17641 aacgaaatat aacttagcga aaaaaacagc ttcagttgaa cagtttgcga cggcacctct
    17701 tgaagcaaaa ggacaaattg tggtggatac aaataaagtt tcacaagaag aattacagct
    17761 tttatttaga aaggcagata aagacaccca aaaacgtttc ttagaatggg cgaagaaaaa
    17821 tataaaataa acctatatca attaataagc ggtcatttct cgccaatttt ttgcaaggtg
    17881 ttaaaaaaat gaccgctcat acaatgagat ttaccagcaa taatagcagt aacgccagcc
    17941 tctatacata tagtctctat cgtaattcca acgaatttct tcaagttcta cttgtgcctt
    18001 gtaattttgc caagcaagct tataacaggc ttggaacatt ggggcattga ctttttcggc
    18061 atagcgtttc ttaaatgctt tctcttcttg ttcggtttgg ctaagcggcg gattaaattg
    18121 ttggtacatt aactccgccg tttctacatc acattgtttg gcgagctgaa cttgcaaatc
    18181 ttgttctgcc cgaatttgct tcgctttacg ttcagcttgt tgctctggag ttaaagtaca
    18241 gctacttaac ataagtgcga gtgaaaaaat gcagcctaat ttgagtgttt tcattgctga
    18301 atcctctagt tgaaattggt gatttattct accgcttcta actcactttc ttcaagttca
    18361 tcagccatag cactaagggc atcacggcta agttgtgcga gggctttata aaaaccattg
    18421 tcgaaagctt ctatttttcc taagaatttg cctgcacaag gtagtaaaaa ttgttcgaat
    18481 aatatttttt gagctaaggc agaatcgaga ttatcttcga tccaagatgc cgtgagaaat
    18541 agtaacccaa tgtgatcggc attttctaat tcaggcattg cccgctcttg tctaaaagct
    18601 acaaaattat taactgataa tccataggct gaaattgttg gagaaatagc cccattttca
    18661 gcaaaaagcg cttgatagct tgctgctaat tgcgtagggt tagcattctt ttgtaagaga
    18721 gtcagcgcat tttcactttg gctatccgta tttaatgccc agacttggcg taatcctcct
    18781 tgggcaagcc agttaaatgt gccagctaaa atagggtcgg tagggtgacg ataaaataag
    18841 ttgccaaaca aacggcaaag cagggaaaaa tcgttaatgg tagtttcgtt cataatttga
    18901 aatagataga aaaaagaatt gttagtatag cagaacacaa gagaggactg aatgaaatat
    18961 ataggcgcac acgttagtgc ttcaggtggg gtggaaaatg cagttttgcg ttccgtagaa
    19021 attggtgcta atgcatttgc gttatttact aagaatcaac gtcaatggca ggcaccggca
    19081 ttaaaagccg aaactatcga aaaatttaag cgtttttgta aagtgcatca tttttcagca
    19141 gagcaaatct taccacacga tagctatttg attaatttag gaaatccgga agcggaggca
    19201 ttggagaaat ctcgtgtagc atttattgat gagatgtctc gagcaaatca attaggttta
    19261 aaattgttga attttcaccc gggggcgcat ttaaagcaaa tttccgagca agattgtttg
    19321 gctagaattg cagaatcgat caatattgca gttgaaaaag taccgaatgt tattgccgtg
    19381 attgaaaata cggcaggaca gggttctaat ttaggttggc atttcgatca tttggcaact
    19441 attattgagc aagttgagga taaaagccga gtgggggtgt gtttagatac ttgtcactta
    19501 ttttctgccg gctatgatat tagttcttat gaaaagagcg aggcagtatt taatgatttt
    19561 aaccaaacgg ttggttttca ttatttaagg ggaatgcact taaatggttc aaaaacacca
    19621 ttaggcagca gagtggatcg tcatcatacc ttaagagaag gcacaatagg aaccgaagtg
    19681 tttgcattta ttatgcaaaa tatgcatttt aaccatattc ctatgatttt agagacaatt
    19741 tcgcctgaaa tttgggcaga tgaaataaaa tttctacgca cattggaact aaaataggtt
    19801 atactggtct gagtagtggg tctagcagag tctagacctt attttgttat cttttttaat
    19861 cttttagaag atttagttaa ggaatttacc gctgtaattg ttctggcgag acgagacata
    19921 aattatgaaa aaaaatcttt ttgcaacaac cttcaagccc gtatttattg cttctatttt
    19981 gtctgttttt ggagggtatt cttccattgc tgtagcaagt ttaagttcta aaccggccac
    20041 accaaatcaa atcattgcaa gtaaagcaga aagattagct aagtcttctt cagtatttac
    20101 caatcgagca aatcttccaa cttcttccgc tcatacagcg aattatagtg gtcgtattaa
    20161 tagtgtttat cataattggg tagggacacg ctatcgttta ggcggcacaa caaaagcagg
    20221 aattgattgt tccgcctttg tgcgtgaagt aatgggcaaa gcatttagta aagatatgcc
    20281 tcgttcaact gcagaacaac gccatgtcgg gcattccatt tcaaaatctg atttacgccc
    20341 aggtgattta gtctttttcc gtaagaataa ccatgtaggg gtttatattg gtaatggtaa
    20401 atttgtacac gctagttcaa gtagaggggt aaccaccagc tcattgtcag aaagctactg
    20461 gtcaagaaac tacacacaat ctcgccgtgt aatttaataa attacaattc caagatgaaa
    20521 agaacactca cttttgcgag tgttcttttt taattaaaaa agtttatgct acgcgttgct
    20581 tagcttgtgt aaatgctcca cgagtacgca tttgatgaac cacattagta attacacctg
    20641 ctatttttac ttcagcccaa tcagtaattc taagatttga ttcgctcaca tctaatgaaa
    20701 ataaaatttt ttcagcaata ccttccccat tctgaatttc attaaagaat tgatagaatt
    20761 tatattcccc atctttttca agcaccaata gatcattaac taaatattgg ttggtctgtt
    20821 ctacaatcaa taaatcgtct agttcaattc cccacgcgat taaatttggg tttttcacgt
    20881 ggataaaaaa agtgtctctt gggcgtttga tacaaagtga gttaagatcg agctttacag
    20941 agcggctgct attgaaatcc cgataaagcg gaatcggctg ataagctgcc gtttgatctg
    21001 aaatttgtct aattgaagcc atagtaaaat cctctatctg tttttttata cagggtattt
    21061 tactggctaa aataccagtg tcaaccatta ttttggaatt ttttgtaaat ttaaccagtg
    21121 ttttgaccgc ttgttatcct ttaaaaagca ataaaaaagc acccataggg tgcttcttat
    21181 gcttaaaagc tgttattata ggctttcagt gaatgtacga gtaataacat cgcgttgttg
    21241 ctcaggggtt aatgagttga aacgaactgc ataacctgaa acacggatcg ttaattgagg
    21301 atatttctca gggttttgaa tcgcatcttc taatgtttca cggcgtaaaa cgtttacgtt
    21361 taagtgctga ccaccttcaa ctttaatcgt tggtgcaaca ttaacgggta cttcacggta
    21421 tgcgatatca cctaattcgc tgatagcaac aacttgatct tcttcaaatc ctgcttttgc
    21481 agctaaacaa cgagcttcat ttttagcttc gtctaataac cagaaagagt ttaataagtt
    21541 gctgtttgat gattctgtga tttgtacacc tttaatcatt ttgatatctc ctctaagatt
    21601 gaaattataa aaaaatttta aaaattcaaa tttatttgaa gttattgtac ccctttttag
    21661 ataaaaagcg ataaaaattt aaccattttt agacatgatt gagttggttg ggtaaaaaat
    21721 atacacttgg tggttttatg aaaacttgga cagaagcttt aggcgaagaa aaacaaaaag
    21781 cgtattttca acaaatttta caatatgtac ataacgaacg attagccggc aaagtcatct
    21841 atcctccgca aaacgaggtg tttagtgctt ttgccttaac cgaatttagt gacgtgaaag
    21901 tagtaatttt agggcaagat ccttatcacg gcccaaatca agcccacgga ttagcctttt
    21961 cagttaaacc gccggttgcc ccgccacctt ctctggtcaa tatgtataaa gaattatctg
    22021 aagatattga aggatttcaa attccaccgc atggctattt aattgactgg gcaaaacaag
    22081 gggtatttat gttaaacacc agcttaacgg ttgagcaagg tagagccggt tcgcattcac
    22141 aaattggttg ggaaattttt accgataaag tgatcgcaca attaaatcaa caccgtgata
    22201 atttagtctt tctactttgg ggaagccacg ctcagagaaa ggggcaattt atcgatcgta
    22261 atcgccattg tgtgttagct tctccgcacc catcaccact ttccgcatat cgtggatttt
    22321 ttggttgtaa acatttttct aaagccaata actacttgat ttctcaagga atatccccaa
    22381 ttaattggca attatcagta gacgttagtt attcttcaac acattagttt aaggagcaaa
    22441 cgatgaattt tgatttaccg attgttagta ttgcatttgt tgtgcttgtt ttagttgcat
    22501 taagttcgac tattaaaatt gtgccacagg gctatcattg gacagtagaa cgttttggtc
    22561 gttatactaa aacgctaagc ccggggttga acattgtcgt accttttatt gatcgtattg
    22621 ggcgaaaaat gaatatgatg gagcaagttt tagatattcc atcgcaagag gttatttcac
    22681 gtgataatgc aagtgttgcg attgatgctg tatgttttgt tcaaacagtt gatgctcgcc
    22741 gagctgccta tgaagtgaat catttagagc aagcaattgt taatttaacc atgacaaata
    22801 tgcgtaccgt gctcggctct atggatctag atgatatgct ctctcagcgt gatttaatta
    22861 acggtagatt actttccatt gtcgatgagg cgactaatat ttggggagta aaagtcaccc
    22921 gtattgagat tcgggatgtt cgtccaccga aagagctggt tgcggcaatg aacgctcaaa
    22981 tgaaagctga gcgtaataaa cgtgctgata ttcttgaagc agaagggatt cgacaagctg
    23041 aaattctgcg ggctgaaggg gaaaaacaat ctcgtatttt aaaagcagaa ggtgaaagac
    23101 aagaagcatt cttacaggca gaagctcgtg aacgagccgc agaagcggaa gctaaagcca
    23161 ctcaaatggt ttctgaagca attgctaaag gcgatactac agcgattaac tattttattg
    23221 cacaaaaata caccgaagct ttgaaagaaa taggttcttc agataacagt aaagttgtac
    23281 ttatgccgtt agaagctgga aatttgattg gttctgttgc tggtattgct gaaattttaa
    23341 aaagcaataa aacaagctca tagcctaaaa ccggattaat tgagtatatg gagggagtat
    23401 ggactggttt tttaattgga ttggctggag catattaggc tttgtactac ttgcattaga
    23461 attagtatta ccgggtgtct ttattatgtg gtggggattt gcctcgctta ttcttgcttt
    23521 catcgttgca ctttttacat tagggcaagc gttacaaatt gcgttatttg cgataattgc
    23581 gactattttt agtcttattt ggtggaaata tcagcatgga aaagacaaga aagaggatca
    23641 gagcagttcc cttaactctc gagagcatgc tatgctagga gctcaaggct ttgtggttga
    23701 aatcttacct aatggcatcg ctcgaggaaa atttggtgat acgacttggc gtgttatagg
    23761 taataattta caagtagcag ataagattga agtccagaaa gtggagggaa ttaccttatt
    23821 tgtccgtaag caataagttt tttcttattt agtcatagaa cactaaacaa aaaccttgaa
    23881 cagttgttca aggttttttc tctcaagcgg ttgaaaatag agtgaaattt gcaaattttc
    23941 accctaaatt aaccgcttgt gtcccaccat aataagttag aaactaaagc caacatttac
    24001 tttccaacca aataggtttg cagatttcac tcgactgtaa tctaaattca tcgcagtaaa
    24061 ccaattttta taatgcagtt tcaccccgac ttcgccgttt aattggcgat tacgtttcgt
    24121 cgttgcttca ctatgcagtg tttttcctgc aatgttactg gtaattttgg ttatttttcc
    24181 atttaatcta tgcaagtaat ttagcccgat ataaggggaa atagagcctt gctcaagttg
    24241 gaaagttcgc tgtaatttca cgcttggaac aatattcaca tcacgataac gcattgcagc
    24301 cgtttgagtc gcaagttcgc cactttcatt taaaccattc attttggttt gaatccattg
    24361 tacgccaagg cttggttcaa ttatccattg gtttggcata aattgataac cgatccgcat
    24421 ttcaccaccg agcgttgaac ctctggtttc tgcagtacct agttgatggc tagcaaatcg
    24481 acggctttgt tgatatttct ggcgagcaaa ttgcaatgta gcttcactaa accaagcgtt
    24541 atctaaatga taacgtaagc caatatttaa tgctgtttgt tttaaggtag cttgtgcaaa
    24601 tggtttttct aagcggtttt tttgctgtga aagtgttgca ctaagtaccg ttttatctgc
    24661 cagtttgtgg tttactccca attgtgattg gtggtgttta acatcggtat gcttcgatga
    24721 ggctgattgt ttttgattca aatgttcagc ccaaacagtc gtttgcagtg gtgtatggta
    24781 tgccgtaaac aaatgttgct gtgcttgggt taagcctttg gcattttggc tacgtagcaa
    24841 ttcaaggcta tctgcataaa tattgttaga tacagcatag tgcagattat ctaatttacg
    24901 ttgttcgagt gcagattgca gccaaccgtt ataccaacta cggcgatagg caataggtgt
    24961 agttcttaac gcatttaata atgctaaacc ggcttgcccg tttgtatcgg ctttctcatc
    25021 agttagtggc ttattcactt ttgcgataat ttcgctctct ttgaaataga gatcttggat
    25081 taaccctcgt ttggctaaat tctcgttttc gactaattgt gtaaatccgc cttgataagt
    25141 tgctttatct ttcaactgta ctacggtcgc tgaaacatca cctgcttcgg ttttttctgt
    25201 taatttatca tcaattttta acgagccggc taaatgtata ttggcttgag cattggcaat
    25261 tagcccagat ttgcccaaca cttctaattg gctttgtcca gacgaagaat aattttgctc
    25321 aacttcggtt ccattgacag ctaaatttgc atggttactg attgttttca ccttagtttt
    25381 accgtttaag gccaatctac cttcttcaac tgctaccgta tctaaatgat tttcgccgtc
    25441 taaatgcagt gatttgtccc ctttttttgt aattttaaat tggctggcga gtggattcga
    25501 ccaatggtca tcacgagtta cggtaatcgt ttcatcattt aggaattgag ttgggccatt
    25561 aacagctttt ttcaggttaa tgagacccca gccataaaca ttatcgaccc ctttttcacc
    25621 taaatcagtg gcggtagtca ataaagtatc gcgaatttga gtcgcagtca gataatcaaa
    25681 gcgttctttt aatactgcta atgaagcagt tatagcaggt gctgaaaatg acgtaccttg
    25741 ctcttttgtt aagccatatt gtggtttttt atgttcatca gcaacgccaa ttaaaacatg
    25801 taaatcgccc ggtgctgcta cacaccagtt tttacttgct ccgcagtggt tagagtatga
    25861 agcaattttt tgttctttat ctaccgcaac ggcagaaatt aaatttttct caagctcggg
    25921 aaagtaacgt ggtagaagag ccattacgcc tggctgtttc ttgctctcat taccagcagc
    25981 aaagactaat aaggtgttgc tatttttggc tctcataata gcttgaagta gcggattgtg
    26041 cttattttgc ttgatagatt gataaaattt atctacaaca ttgatgtcat cgctaataga
    26101 aaaaggattc caactattat tgattgcaaa aacattatta tctagtaatt tattcagccc
    26161 ggatgcccat tcagcacgtt caattgccat ttctttttct ttgcttgcta ataagtcatt
    26221 ctttgccatt tgatccagac ttggcgtttt ttcatcctct tcgtcttttg cattttctaa
    26281 ttctttctta gcatcttgaa taactttttc taaagttcgt ttatatgact tcgttgcaac
    26341 ataaagctca gctccctttg caataccacc actatagcca tcaccaagag ttttatctgc
    26401 ttgagcggca ataataccag ctacacctgc accgtgtgtt tcaagagaag gaataagatc
    26461 aattccatct tctttttcta cggggtttac ctcgaattga gggtaacttg catcgtagat
    26521 tcttacttcg ccttcgggtg ttgttaattg atgaataaga ggatgaagat gtgaactatg
    26581 gcgagggtgt ttaaccatga agccctcatc cattacgcct agtttaacac ccttgccact
    26641 atattttgag ctgaggctct cagataattg aatgataggt tgtggattct ctattgattc
    26701 tgtagcgtat gcaatagata aaaaactaga aatgctaatt gcaataagtg ttt
//
LOCUS       DANLXO010000025        25899 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.025, whole genome shotgun sequence.
ACCESSION   DANLXO010000025 DANLXO010000000
VERSION     DANLXO010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 25899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25899
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.025"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            201..1178
                     /gene="manX"
                     /locus_tag="PXD69_000870"
     CDS             201..1178
                     /gene="manX"
                     /locus_tag="PXD69_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HDL6283086.1"
                     /translation="MSIAIIIATHGVAAEQLLKTTEMLIGEQEDVAYIDFVPGENAET
                     IMGKYQALVEGPLSHCDQVLFLVDMWGGSPFNAANRFQDGKSGMDVVAGVNIPMLVNT
                     CMARDDVESLEELVEVALEAGSTGIRSLNHQPEVAEVQTATPAQETAAVQQPEIVDDG
                     RRMTIALARIDDRLIHGQVATVWTKESKVNRIIVVNEGVAKDSVRTTMLKSVAPLGVT
                     AHVVDVPKMIRVYNNPEYADDRVMLLFTNPSDVLALIEGGVPLNSINVGGISHKEGKQ
                     MVSHSVAVDQNDIDAFKAIDAKGVELEVRKVSSDSRQYMMDLLKKHNLI"
     gene            1190..1990
                     /locus_tag="PXD69_000871"
     CDS             1190..1990
                     /locus_tag="PXD69_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005716709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HDL6283087.1"
                     /translation="MELSALQIVLLFLVACISGMGSILDEWQTHRPLIACTMIGLVLG
                     DVTTGVIVGGSLELLALGWMNIGAAVAPDAALASIVSTILVIVGRQDISTGIAIAIPL
                     AAAGQVLTYVVRAITVGFQHAADKSIEDGNLSRLDWLHRGALLLQAMRIAIPALIVAL
                     TAGTDAVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFFAGFVIAG
                     FTDFNLVALGVLGTVIAMVYIHMHPKYNKSQQVVVAAAPKNDLDNRLD"
     gene            2004..2840
                     /locus_tag="PXD69_000872"
     CDS             2004..2840
                     /locus_tag="PXD69_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005564636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HDL6283088.1"
                     /translation="MTTEIKKVTKSDLNAVVRRSNLFQGSWNFERMQALGFAYAMVPV
                     IKRLYPDPNGPGRKEAIKRHSEFFNTQPFVGAPILGVTIAMEEERANGKEIDNAAING
                     IKVGLMGPLAGVGDPIFWGTVRPVFAALGAGLALKGELLGPILFFALFNIVRLAARYY
                     GVVYGYKKGLDVVQDMSGGLLQKLTEGASILGLFIMGALVQKWTSINVPLVLSTIQKQ
                     DGTIEVTTVQSILDSLMPGLLPLLLTFACMWLLRNRVNAIWIILGFFVIGILGAATGA
                     LA"
     gene            2933..3418
                     /locus_tag="PXD69_000873"
     CDS             2933..3418
                     /locus_tag="PXD69_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HDL6283089.1"
                     /translation="MTNTILILFILLGLVFAIYDQVFMHKLKGTTLLEIRLKKQKTID
                     TWLLIGLIVLSISYGVQNQIQPFTLYLLATCIILSVYLAFFRSPRLLLKQHGFFFANV
                     FFNYDKIYQVNIAEGKADEKILVIDLHSGRRLLAYVENAEDLQPVVDFFGGYKKESEQ
                     K"
     gene            complement(3504..4295)
                     /gene="tpiA"
                     /locus_tag="PXD69_000874"
     CDS             complement(3504..4295)
                     /gene="tpiA"
                     /locus_tag="PXD69_000874"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDL6283090.1"
                     /translation="MARRPLVMGNWKLNGDKAFTKTLIADLKAELHGVEGCDVAIAPP
                     VMYLAHAEASLAGCGCGCSDKGLIALGSQNVDVNVKGAFTGDISPEMLKEFGAKYIII
                     GHSERRTYHKESDEFIAQKFKVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVI
                     NAHGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHKFIRDHIAAKSQAVADQVIIQY
                     GGSVNDANAAELFTQPDIDGALVGGVSLKAPAFAVIVKAAAAAKA"
     gene            4455..5369
                     /locus_tag="PXD69_000875"
     CDS             4455..5369
                     /locus_tag="PXD69_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDL6283091.1"
                     /translation="MKLNYLYSPPQAVGRLKAEYADFIVREELGYELAGEGEFVAVKI
                     RKTNASTLFVGEKLAKFVGISEREMSYAGLKDRHNRKIRVGSLAGNHFELLLRDVAES
                     EELIYRLQQLQAVGFPNYFTEQRFGRDGHNLTQALRWANGEISVKDRKKRSFYLSAAR
                     SEVFNLVVSQRINDCLTQKILENDYVQLAGSNSFFCVKSDEIAETQARLAQQDLLLTA
                     PLIGERSLELECNPAEKAIIEQHAQLVALMQKERMAAARRAMLCKPQNLEWQFEQEGL
                     RLKFFLDSGSYATALVRELILLTEESEA"
     gene            5540..6328
                     /gene="surE"
                     /locus_tag="PXD69_000876"
     CDS             5540..6328
                     /gene="surE"
                     /locus_tag="PXD69_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDL6283092.1"
                     /translation="MRILISNDDGFHAVGIQTLAKALRDAGHIVTIIAPDRNRSAASS
                     CLTLVDPLRVHRFDEYNYAVIAGTPADCVHLALNGLFDGKFAEKFDLVVSGINHGANL
                     GDDVVYSGTVAAALEGRHLPLPSIAVSLVGRKHSSFLDGENHFGTAAQVVLDLLEKME
                     TQRFPSNHVLNVNVPNLPYSELKGTMITRLGERSPAAEIVKQKDPRNADVYWIGVTGE
                     PLDESFGTDFYALNRDCVSITPIQVDMTAHKTIATLKGIFNETV"
     gene            6315..6899
                     /locus_tag="PXD69_000877"
     CDS             6315..6899
                     /locus_tag="PXD69_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL6283093.1"
                     /translation="MKLFETIYDKTMQWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLI
                     PMSMAKPQNAFKYAVYTTLASVAGGVIGYFIGLYATDWVQGVIANWGMQANFDKAKLW
                     FETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFILVAKLSAWG
                     GKKYEQKIRRSIELIGWGTIVLAVVAYIIYTLMK"
     gene            6917..7417
                     /locus_tag="PXD69_000878"
     CDS             6917..7417
                     /locus_tag="PXD69_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDL6283094.1"
                     /translation="MKKSLFVLSLISFALVGCSSNSGESTSAVETTEANATWQSADSI
                     QTAPMPASMNQPIATQPTYQQPTYSAPQPISAAPAPMPVSSGSDSSQVETVGNCQVVR
                     DANNAPIYSQITKGCYTESHYTVGKSDTLYLIGYLTGTNANQIAQLNGLNTGSPLKVG
                     QVLRVR"
     gene            7430..7630
                     /locus_tag="PXD69_000879"
     CDS             7430..7630
                     /locus_tag="PXD69_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283095.1"
                     /translation="MNRTLLAFAISCAFLTACSSPTQPQVEDPNMLPAGTLQPIEGSG
                     ASQDSYSWPSDIQSTSMPDSMK"
     gene            7649..8929
                     /locus_tag="PXD69_000880"
     CDS             7649..8929
                     /locus_tag="PXD69_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL6283096.1"
                     /translation="MKKQFILLPLVSAVLAACSSNNPAPVVNASGNNELSPGVMQPVD
                     VSAGAINSSGGWQSDIQSAPMPSSMNTTPVQTMPQPVSVPQPVATVPQPITNPVITEQ
                     PPQPTTTTKIVKKTKTVEKKVDQNFEIPRDANNAPMYNQIQKGFYDGSTYTVRKGDTM
                     FLIAYIVGKDVKEIAALNNMSEPYQLSVGQKLKTGKSATETITVEEKVTVPVEPQITY
                     QQGANGTTYASGGNITGPVKAGTANADVTPVNNGIKATTATAPAVTASVGTVNATEDR
                     TASTIRAIDGTASGAVQSSNTVSAPASSIKWQWPTSGRVISGFSSAEGGNKGIDIAGN
                     KGQDVRAAAAGKVVYAGNALQGYGNLIIIKHTDDFLSAYAHNNTIEVDEQETVKAGQK
                     IATLGSTGTNTNKLHFEIRYKGKSVDPARYLPRK"
     gene            9170..9361
                     /locus_tag="PXD69_000881"
     CDS             9170..9361
                     /locus_tag="PXD69_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283097.1"
                     /translation="MDPTEPSHRIYILLSEDRFQAEVFSTKLSESSMLLEAVKGGYIS
                     KDGKVRLLKKAEGWKIYYE"
     gene            9354..9920
                     /locus_tag="PXD69_000882"
     CDS             9354..9920
                     /locus_tag="PXD69_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDL6283098.1"
                     /translation="MSETKIRCDWCKSSEIYMKYHDEEWGKPEFDSLKLFEKICLEGQ
                     QAGLSWITVLKKREAYRQAFHQFNPEKIAKMGEEEIDLLMQNTSLIHHRAKLEAIIKN
                     AKAYITMQQNGEDFSRFIWSFVNYQPQINDVPTLEAVPAHTETSKAMSKALKKRGFVF
                     VGETTCYAFMQSMGLVNDHLNNCVFKHK"
     gene            complement(9967..10197)
                     /gene="acpP"
                     /locus_tag="PXD69_000883"
     CDS             complement(9967..10197)
                     /gene="acpP"
                     /locus_tag="PXD69_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDL6283099.1"
                     /translation="MSIEERVKKIIVDQLGAKAEDVKPEASFIEDLGADSLDTVELVM
                     ALEEEFDIEIPDEEAEKITTVQSAIDYVQNNQ"
     gene            complement(10384..11061)
                     /gene="rpe"
                     /locus_tag="PXD69_000884"
     CDS             complement(10384..11061)
                     /gene="rpe"
                     /locus_tag="PXD69_000884"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDL6283100.1"
                     /translation="MSKNPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHY
                     VPNLTFGPAICKALRDYGIQCPIDVHLMVKPVERLIPDFAKAGADYITFHPEATEHID
                     RNLQLIRDLGCKSGLVFNPATPLSYLDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKL
                     KEVRRRIDESGYNIRLEVDGGVKINNIADIAAAGADMFVAGSAIFDQPDYQAVIAQMR
                     DELRKVG"
     gene            11255..11527
                     /locus_tag="PXD69_000885"
     CDS             11255..11527
                     /locus_tag="PXD69_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDL6283101.1"
                     /translation="MKKGIHPENYREVLFYDASVQQGWVIRSCAATNKTMVWEDGKEY
                     PLYTLDTSSASHPVYTGKRREVNTEGRASQFKDRFKGFASTLSNQK"
     gene            11536..11661
                     /gene="ykgO"
                     /locus_tag="PXD69_000886"
     CDS             11536..11661
                     /gene="ykgO"
                     /locus_tag="PXD69_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HDL6283102.1"
                     /translation="MKILNSLKTAKSRHPDCQIVRRKGKLYVICKTNPRFKARQR"
     gene            11841..12614
                     /locus_tag="PXD69_000887"
     CDS             11841..12614
                     /locus_tag="PXD69_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6283103.1"
                     /translation="MLKKLSIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAP
                     YTYHDASGKLTGYDVEVTRAVAEKLDVKVEFKETQWDAMLAGLKGERFDLVANQVALT
                     SPERRATFDKSESYSWDGAALLVREDETKIKTPADVKGVKTAQTLSSNYGEIARENGA
                     DIVPIDGMAQGLLLIQQKRADATFNSHLSLLDYLKKNPNSGLKIVWEKEEKVGAGLIA
                     NKGNDEALAKISKAIVELREDGTLKKLGEQFFGKDISVQ"
     gene            12697..13413
                     /locus_tag="PXD69_000888"
     CDS             12697..13413
                     /locus_tag="PXD69_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDL6283104.1"
                     /translation="MLNDLLLSIPFMTQARVDLVLSGFWPMVQAAFLVSIPLAIASFI
                     IGMLIAVAVALVRISPATGFFHRLLLWLVKGYISIIRGTPMLVQICIVFYGLPAIGIF
                     IDPIPAAIIGFSLNIGAYGSETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAF
                     RVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFC
                     WVLFLIQARLEVRFNRFVAK"
     gene            13423..14175
                     /locus_tag="PXD69_000889"
     CDS             13423..14175
                     /locus_tag="PXD69_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDL6283105.1"
                     /translation="MLKIRNIHKTFGNNAILRGIDLDIQKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEQGTLEFSGNAPLKIDFAVKQSKKEILALRRKSGMVFQNYNLFPHKTAL
                     ENVMEGPVFVQQQAVEIAQKNAKALLEKVGLADKAELYPFQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNTMKELANEGWTMVVVTHEIKFALDVADVVVVMDG
                     GEIVEQGSPQQLFNHPQHERTKRFLNQIRADK"
     gene            complement(14391..14924)
                     /locus_tag="PXD69_000890"
     CDS             complement(14391..14924)
                     /locus_tag="PXD69_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDL6283106.1"
                     /translation="MEFLAPVISLIVGFLSFVLVLRTWLQFCRVDPRLPISQTLLKIT
                     EPMVSPVGKLIPTVKNICFPALLIAAALVTLQFILFGVDLPRAVLIGLLSVVKTFGQI
                     LFFTTLIRALMSWVTQGNHPLDYTVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLL
                     LLNSLFYQIFGGLWAAA"
     gene            complement(15030..15371)
                     /locus_tag="PXD69_000891"
     CDS             complement(15030..15371)
                     /locus_tag="PXD69_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HDL6283107.1"
                     /translation="MAIQRNARQRKKMHLGEYQELGFLIKFTFAEGTGIDQIDETVDR
                     FIDEVIRPNGLALEANGYLNWEGLVCLEKLGKCDESHRQLVKTWLETNGLKEVQVSEL
                     FDIWWDYPAQA"
     gene            complement(15395..16144)
                     /gene="trmB"
                     /locus_tag="PXD69_000892"
     CDS             complement(15395..16144)
                     /gene="trmB"
                     /locus_tag="PXD69_000892"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDL6283108.1"
                     /translation="MSEKQTFADKKRKTVEQAEFTEDGRYLRKVRSFVLRTGRLSDYQ
                     RDMMNNNWANLGLDYQPMPFNFEQIFGNNNPVVLEIGFGMGKSLVEMAEQNPNRNYIG
                     IEVHTPGVGACIAYALEKGVKNLRVICHDATEILRDSIADGTLGGLQLYFPDPWQKAK
                     HHKRRIVQPEFISRVIRKLSPNGFIHFATDWENYAEHMLEVLRQFESELQNTSATNDF
                     IPRPNFRPLTKFEERGHRLGHGVWDLYFTKK"
     gene            complement(16154..17104)
                     /locus_tag="PXD69_000893"
     CDS             complement(16154..17104)
                     /locus_tag="PXD69_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDL6283109.1"
                     /translation="MNSRILATGSYLPTKVRTNADLEKMVDTSDEWIVTRSGIRERRI
                     AEPDETVATMGAKAAQQALEMAGIEANDIDLIVVGTTTNSHAYPSAACQIQGLLQIED
                     AIAFDVAAACTGFVYALTVADQFVRNGQVKKALVIGSDINSRMLDETDRSTVVLFGDG
                     AGAVILEASEELGIISTHLHASPDLENNLTLRSQKRGEERSGFIEMQGNATFKIAVNQ
                     LSSVVEETLEANNLQKSDLDWLIPHQANLRIITATAKKLEMEMDQVVVTLDKYANTSG
                     ATVPVALDEAVRDGRIQRGQLLLLEAFGGGWTWGSVLVKF"
     gene            complement(17250..18269)
                     /gene="hemB"
                     /locus_tag="PXD69_000894"
     CDS             complement(17250..18269)
                     /gene="hemB"
                     /locus_tag="PXD69_000894"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDL6283110.1"
                     /translation="MQVIQSQYPLRRMRRLRKHDFSRRLVAENQLTVNDLIYPVFVIE
                     GENQRVQVPSMPGVERLTIDQLLVEAAELVKYGVPAVALFPVVGDVKKSLMAEEAYNP
                     QGLAQRAVRALKAQFPELGVITDVALDPFTTHGQDGIIDETGYVLNDVTTEVLVKQAL
                     SHAEAGADIVAPSDMMDGRIGKIREALEQNGFINTQIMAYSAKYASNYYGPFRDAVGS
                     AGNLKGGNKYTYQVDPANGNEGLHEVAMDIQEGADMVMVKPGMPYLDMVWRVKENFGV
                     PTFAYQVSGEYAMHMAAIQNGWLKERECIMEGLLCFKRAGADGILTYFAKRVAKWLYE
                     EAQAK"
     gene            complement(18350..19105)
                     /gene="tatC"
                     /locus_tag="PXD69_000895"
     CDS             complement(18350..19105)
                     /gene="tatC"
                     /locus_tag="PXD69_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDL6283111.1"
                     /translation="MSQVDESQPLITHLIELRNRLLRSFICVLLVFCGLVYWANDIYT
                     LLATPLTDNLPDGATMIATNVATPFFTPIKLTIVVSVFLSVPFILYQIWAFVAPALYK
                     QEKRLVYPLLVSSTLLFYCGVAFAYYVVFPLVFGFLTSTAPEGVTMATDISSYLDFVL
                     TIFMAFGICFEVPVAIILLCWAGVTTPEDLKAKRPYIIVAAFVIGMLLTPPDIFSQTL
                     LAIPMCLLFEVGVLFARFYRPKDDDEPSEQVAQ"
     gene            complement(19092..19736)
                     /gene="tatB"
                     /locus_tag="PXD69_000896"
     CDS             complement(19092..19736)
                     /gene="tatB"
                     /locus_tag="PXD69_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDL6283112.1"
                     /translation="MFDIGFSELVLIMIVGLVVLGPKRMPIAIRTVMGWVSTIRGLAA
                     NVQNELAQELKLQELKESIKKAEELNLSSLSPELNKTVEDLKMSATQLQDSLNSAKNE
                     LEKTAAESSTIPKLTDEQVAEIQQKIEQESQVLEAQELQKNAQNKPLEVDSLSEQLNV
                     TRTEKPLSADELAEQAEMDESLLTLESYYPPDDDLATPQSSESAQKSEANNVAS"
     gene            complement(19740..19961)
                     /gene="tatA"
                     /locus_tag="PXD69_000897"
     CDS             complement(19740..19961)
                     /gene="tatA"
                     /locus_tag="PXD69_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HDL6283113.1"
                     /translation="MGGISIWQLLIVVAIIVLLFGTKKLRTLGSDLGESVKGFKKAMA
                     DEKKDAEFEKVEAKDAISAEQKAKEKEQA"
     gene            complement(20072..21709)
                     /gene="ubiB"
                     /locus_tag="PXD69_000898"
     CDS             complement(20072..21709)
                     /gene="ubiB"
                     /locus_tag="PXD69_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HDL6283114.1"
                     /translation="MNIKNLNRFYHIIRTFLRYGIDEAIPNLPITRKIKLGRKALFWV
                     KNQHSDKPYGVRLRLALQELGPVWIKLGQMLATRRDLFAPELADQLALLQDNVEPFDG
                     KIARQIIEQALGGKLETWFENFDETALASASIAQVHTAKFNQNQPLAGKDVVLKVIRP
                     GIEPVIKADLELMYEIAHFIPKLSNDGKRLRAVEVVREYEKTILDELDLRKEMHNAIR
                     LRANFENSEMLYVPEMYQDFCHKNLIAMERIYGIPVSNIAELEANSTDMKLLAERGVQ
                     VFFTQVFRDSFFHADMHAGNIFVNREHPENPQYIGIDCGIVGTLNHNDKRYLAESFVA
                     FFNRDYRRVALMHVESGWTPPDTDIDKFEQAFREVCEPIFAKPLSEISFGHVLLNLFN
                     VAREFNMEVQPQLVLLQKTLLYIEGLGRQVYPQLDLWQTAKPFLQNWLNEQVGVKAMV
                     RDIKQRLPQYREHFAEFPEALFKALQEQKQINFRLAEINESLKAQNSNANSRFLVLSI
                     SAIVICGAFWKFESLPIWLSVPLLTLFPLVLILSQRK"
     gene            complement(21783..22760)
                     /locus_tag="PXD69_000899"
     CDS             complement(21783..22760)
                     /locus_tag="PXD69_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL6283115.1"
                     /translation="MKQIIAQARENAVRAVDFQRVLMYWHIGKRIFEQEQQGQERADY
                     GTYLIKMLAKELEPEFGSGFCSRQLERYRQFYRAFPIATALRSQLNWTQYRRLIQISD
                     SDKREFYLAESCKNNWSSRQLERQINSSLYERLLLSNDKESVLAVARNEQQPVDPKQL
                     IKDPMVLEFLGLKRESAYYEKDLEQAIITHLQDFLLELGNGFSFIARQKRLHLDGDDF
                     FVDLVCYNRLLQCFVIFEIKTHKLTHQDLGQLQMYVNYFDRVEKLPHENATIGVLLCA
                     DKNDAVVKFSLPENQNKIFASQYQLYLPSEQTLIAEVQKEIENFEQKYP"
     gene            complement(22921..23568)
                     /locus_tag="PXD69_000900"
     CDS             complement(22921..23568)
                     /locus_tag="PXD69_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HDL6283116.1"
                     /translation="MLNNVKQQLMLPQFTFGLIETAFNALLKRSPHIEPNLRKLSGKV
                     LKIALTSPKIDFFVLFSESRTDWLGNYEGEADCTVQLAFDTLPKLADKQKLTELINNK
                     SLVLTGDIQVLQHFTALLEQLEKDPAELLSPFVGDVVAQTSTDLAKKLLGKVKAQFEQ
                     NNQHLVENLIQERPVLVHRLQAVHFYDQVEELAQQALKLEQKFTHYVRSSSHQQS"
     gene            complement(23759..24511)
                     /gene="ubiE"
                     /locus_tag="PXD69_000901"
     CDS             complement(23759..24511)
                     /gene="ubiE"
                     /locus_tag="PXD69_000901"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDL6283117.1"
                     /translation="MQQSAETTHFGFKTVAKEEKQQLVANVFHSVAGKYDLMNDLLSF
                     GIHRVWKRFTIDCSGVRKGQKVLDLAGGTGDFTAKFSRIVGESGEVILADINSSMLEV
                     GREKLRNLGVVGNVSYVQANAECLPFADNTFDCIVISFGLRNVTDKDKALRSMFRVLK
                     PGGRLLVLEFSKPIIDPISQLYNFYSFNILPKVGEVVVNDAESYRYLAESIRMHPKQD
                     ELKAMMEQTGFESVNYYNLSAGIVALHRGYKF"
     gene            24856..25809
                     /gene="corA"
                     /locus_tag="PXD69_000902"
     CDS             24856..25809
                     /gene="corA"
                     /locus_tag="PXD69_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDL6283118.1"
                     /translation="MIRAFGLDNACLISVDETNPTLLNDAIWIDLIDPSEAERTVLEN
                     RLDQTLAEERELEDLEASARFFEDEDGLHLHSFFYCLDDDDYADIATVAFTIRDGRLF
                     TLRDRDLPAFRLYRMRSRREKLIDSNAYELLLDLFETKIEQLADVIEEVYADLEKLSR
                     VILNGQQENENFNDALSRLTEFEDASSKVRLCLMDTQRALSFLLRKTRLPNNQLEQAR
                     DIMRDIESLQPHNESLFQKVNFLMQAAMGYINIEQNRIMKFFSVVSVMFLPATLVAST
                     YGMNFEFMPELHFQYGYPMAIGLMIVAASAPYLYFKRKGWL"
BASE COUNT         7510 a         5579 c         5194 g         7616 t
ORIGIN      
        1 gtataagtaa aaacgatcga aaatatctcc gttaacaaaa tgttataaag aaaagacatt
       61 tagcccaatt tatagccaaa aaagcttatt gtctgtgata tagatcacac ttttgtaatt
      121 aatacattgt gtgaaataat tatcatatta aaatctcgcc ccagtaaata aacaacttaa
      181 aaaaccgcaa ggagtaacaa atgagcattg ctattatcat agcaacccat ggtgttgctg
      241 cagagcaact tctcaaaaca actgagatgt tgattggtga acaagaagat gttgcttaca
      301 ttgactttgt tcccggcgaa aatgcagaaa cgattatggg caaatatcaa gcattggttg
      361 aaggtccact atcacactgt gatcaagtgc tgtttttggt ggatatgtgg ggaggaagcc
      421 cattcaacgc cgcaaaccga ttccaagatg gaaaatcggg tatggatgtt gttgcgggtg
      481 tgaatattcc tatgttagtg aacacctgta tggctcgtga tgatgtggag tcgttggaag
      541 aattggtgga agtcgcatta gaagccggct caaccgggat tcgttcactt aatcaccaac
      601 ctgaagtggc tgaggtgcaa accgctactc ctgcacaaga aactgcagct gttcaacagc
      661 ctgaaattgt tgatgacgga cgtcgtatga ccattgccct tgcccgtatt gatgaccgct
      721 tgattcacgg tcaagttgcg acggtttgga caaaagaaag taaagtcaat cgcattattg
      781 tggtaaacga aggtgtagca aaagatagtg tacgaactac tatgctaaaa agtgttgctc
      841 ctcttggcgt aacggctcac gttgttgatg tacctaaaat gattcgtgtc tataacaacc
      901 ctgaatatgc cgatgatcgt gtaatgttac tctttaccaa cccaagtgat gtcttagcct
      961 taattgaagg cggtgtacca ctcaatagca ttaacgtggg cggtatttcg cataaagaag
     1021 ggaaacaaat ggttagccat tctgtggcgg ttgatcaaaa tgatattgat gccttcaaag
     1081 caattgatgc gaaaggcgtt gaattagaag tacgcaaagt ctcaagcgat agccgtcagt
     1141 atatgatgga tttattgaaa aaacataact taatctaaag gaaattacta tggaactttc
     1201 agcattacaa attgtgcttt tattcctcgt tgcctgtatc tcaggtatgg gctcaattct
     1261 tgatgaatgg caaacccacc gtccgttaat tgcctgtacg atgataggct tagtgcttgg
     1321 tgatgtgact accggcgtta ttgttggtgg ctcattagag ttattagctt taggttggat
     1381 gaacatcggt gccgctgttg caccagatgc ggcattagcc tctattgtct caaccatttt
     1441 agtcattgta ggtcgtcaag atatttcaac tggtatcgcc atcgctattc cgcttgcagc
     1501 tgccggtcaa gtattaacct atgttgtgcg tgcaatcacc gtaggtttcc aacacgcagc
     1561 agataaatca attgaagacg gtaacttaag ccgtttagac tggttacatc gtggtgcttt
     1621 attgcttcaa gcaatgcgta ttgccattcc ggcattaatt gtggcattaa cagcaggtac
     1681 agatgcggtt caaacaatgt taaatgccat tcctgaagtg gttacaaccg ggctgaaaat
     1741 tgccggtggc ttcatcgccg tggtgggtta tgcgatggtg atcaatatga tgcgtgcagg
     1801 tcatttaatg ccgttcttct tcgcaggctt tgtaattgca ggctttaccg atttcaatct
     1861 tgttgccctt ggggtattag gtacggttat tgcaatggtt tatatccata tgcaccctaa
     1921 atataacaaa agccaacagg tagtggtggc agctgcacca aaaaatgatt tagacaaccg
     1981 tttagactaa gagggcattt aaaatgacaa ctgaaatcaa aaaagtaaca aaaagcgatt
     2041 tgaatgccgt tgtacgtcgt tcaaacttat tccaaggttc gtggaacttt gagcgtatgc
     2101 aggctcttgg ttttgcgtat gcgatggtac cggttatcaa acgtttatat ccggatccaa
     2161 atggcccggg tcgcaaagaa gcaattaaac gccattctga gttctttaac acccagccat
     2221 tcgtcggtgc accgatttta ggggtaacca ttgctatgga agaagaacgt gccaacggta
     2281 aagaaatcga caatgccgca attaacggta ttaaagttgg tttaatggga ccattagccg
     2341 gtgtgggtga cccaattttc tggggaactg ttcgccctgt atttgccgca ttaggagcag
     2401 gcttagcctt aaaaggtgag cttttaggcc caatcctgtt tttcgcctta tttaacatag
     2461 tgcgtttagc cgcacgctat tatggcgtag tgtatggcta taaaaaaggg ttagatgttg
     2521 tacaagatat gagcggcggt ttattgcaaa aattaaccga aggtgcttca atcttaggtc
     2581 tgtttattat gggggcattg gtacaaaaat ggacgagcat taacgttccg cttgtgcttt
     2641 caaccattca aaaacaagac ggtaccatcg aagttaccac agtgcaaagc attctcgaca
     2701 gcttaatgcc gggcctactc ccattattat taacctttgc ttgtatgtgg ttacttcgta
     2761 atcgagtaaa tgctatctgg attatcctcg gtttctttgt tatcggtatc ctcggcgctg
     2821 caaccggtgc attagcttaa ttgcaaaatt ttctgtgaaa acgaccgctt gaacttgaac
     2881 attcaagcgg ttttttatac gctttagccc aaataaattc acttgcttaa ttatgaccaa
     2941 taccatcctt attctcttta ttttacttgg cttagtattc gccatttatg accaagtttt
     3001 tatgcacaaa ctcaaaggca caaccttact ggaaatccgt ttaaaaaagc aaaaaacaat
     3061 tgatacttgg ttattgattg gtttaatcgt cttgtcaatt agctatggcg tacaaaatca
     3121 aatccagcct tttacacttt acctgctggc gacttgcatt attctgtcgg tctatctcgc
     3181 ctttttccgt tcccctcgct tgttgttaaa acagcacggt tttttctttg cgaatgtctt
     3241 ttttaattac gacaagattt atcaagtcaa tattgcagaa ggaaaagcag acgaaaaaat
     3301 tttggtaatt gatttacata gcggaagaag gctgcttgcc tatgttgaaa atgcggaaga
     3361 tcttcaaccg gtagtggatt tttttggcgg ttataaaaag gaaagtgagc agaaatagtt
     3421 tgcgaacaaa acacaagcgg tcatttttcc ctgaaatttt gcaaaaaact gaggaaaaat
     3481 gaccgcttgt aaaatcggtt aaattaggct ttagcagccg ctgccgcttt aacgatcacc
     3541 gcaaaagcag gcgctttaag tgaaacaccg cctactaatg caccgtcaat atccggttga
     3601 gtgaataact ctgctgcatt ggcatcgttt acagagccac cgtattgaat gatcacttgg
     3661 tcagccactg cttgcgattt agctgcaata tggtcacgaa taaatttatg cactgcttgt
     3721 gcttgtgccg gagtcgctga tttgccggta ccgattgccc aaattggttc gtaagcaata
     3781 actgcaccgt tgaatgcttc cacaccgtgc gcgttgatga ccgcatcaat ttgtcttgca
     3841 cacacttctt cagttttacc tgcttcattt tcggcttcag attcaccgat acataataca
     3901 ggcactaagc cggcatcttt taatactttg aatttttgag caataaattc atcgctttct
     3961 ttgtggtaag tacggcgttc tgaatgcccg ataataatat attttgcccc aaactctttt
     4021 aacatttcag gtgaaatatc accggtgaat gcccctttta cgttcacatc aacgttttgt
     4081 gaaccaagtg cgattaagcc tttatcactg caaccacagc cacaaccggc aagtgatgct
     4141 tcagcgtgtg ccaaatacat caccggtgga gcgattgcta catcacagcc ttcaacgcca
     4201 tgtaattctg cttttaaatc tgcaattaag gttttagtaa acgctttatc accgtttaat
     4261 ttccagttac ccattacaag tggacgacgt gccattttgt ttctcctata tgaagttgaa
     4321 cttaaatata aacgttgcaa actataccaa attttaatgt cgttttgttg tttttatttt
     4381 gctttttctg atctagatcg aaaggtttaa cgtataatgc cgaaatctta ttttttatgt
     4441 tattcgagaa gtgaatgaaa ctgaattatt tatactctcc tcctcaagct gttgggcgac
     4501 taaaagccga atatgcagac tttattgtgc gtgaagaact gggctacgaa ctagccggcg
     4561 aaggggaatt tgtggcggtt aaaatccgca aaaccaacgc cagcacgctg tttgtggggg
     4621 aaaagttagc caaatttgtc ggtatttccg agcgtgaaat gagttatgca ggcttaaagg
     4681 accgccacaa ccgcaaaatt cgtgttggtt cgctcgccgg caatcatttt gaattattgc
     4741 tacgtgatgt agcagaaagc gaagagttga tttaccgttt gcaacagttg caagcggtcg
     4801 gatttcccaa ttattttacc gaacaacgtt tcgggcgaga cggacataac ctgactcaag
     4861 ccttgcgttg ggcaaacggg gaaattagcg tgaaagatcg caaaaaacgc agtttctacc
     4921 tttccgctgc ccgctcggaa gtgtttaatt tagtggtttc acagcggatt aatgactgct
     4981 taacccaaaa aatcttggag aatgattacg ttcaacttgc cggctctaac agctttttct
     5041 gcgtgaaatc ggacgaaatt gctgaaactc aagcccgttt agcacagcaa gatctacttc
     5101 tcaccgctcc gctgataggc gaaagatcgc ttgaattaga atgcaatcct gctgaaaaag
     5161 ccatcataga gcaacacgct caattggttg ccttaatgca aaaagagcgt atggcagccg
     5221 ctcggcgagc aatgctttgt aagccacaaa atctggaatg gcaatttgaa caagaagggc
     5281 tacggttaaa attcttttta gattcaggca gttatgccac tgcactggtg cgagagttaa
     5341 ttctgcttac cgaagagagc gaagcttagt ccataacaca taacaagcgg taagatttta
     5401 atcatttttt gcaatttgca aaactttaac aaaatcttac cgctttttgc acttttagac
     5461 taaaaaaact gtcgaaaaat tgttagaatt gcgatctttg tatttagagt ctatcaagat
     5521 gtaagatcta aaggaaatta tgcgaatttt aattagtaat gacgatggtt ttcacgctgt
     5581 cggcattcaa actttagcca aagccttgcg agatgcaggc catatcgtca ccattattgc
     5641 accggatcgt aaccgcagtg cagcttcaag ctgcctaacc ttagtagatc cacttcgggt
     5701 gcatcgtttt gatgaatata attatgcggt gatcgccggc acacctgccg attgcgtgca
     5761 tttagcctta aacggcttgt ttgacggcaa atttgcagaa aaatttgatt tggtggtctc
     5821 cggcattaat cacggggcaa atttaggcga tgatgtggtt tactccggta cggtagcggc
     5881 agcattggaa ggccgccact tgccattacc aagtattgca gtatcactgg ttgggcgtaa
     5941 acactcttcg tttttagacg gtgaaaatca ttttggaacg gcagcacagg tagtgttaga
     6001 tttattggaa aaaatggaaa cgcaacgttt tccatcaaac cacgttctca atgttaatgt
     6061 gccgaattta ccttattcag agctaaaagg cacaatgatc acccgcttag gtgaacgttc
     6121 acccgctgcg gaaattgtga agcaaaaaga tcctcgtaat gctgatgtct attggattgg
     6181 tgtaacaggt gaaccactgg atgaaagttt tggtactgat ttttatgcat taaaccgaga
     6241 ttgcgtttct atcacaccaa ttcaagtgga tatgaccgct cataaaacga tagcaacctt
     6301 aaaaggcatt tttaatgaaa ctgtttgaaa caatttatga caaaacaatg cagtggtcta
     6361 agcaccgctt cgctgccttt tggttgagtt ttgtcagttt tatcgaggcg atctttttcc
     6421 cgattccgcc ggatgtgatg ttgattccga tgtcgatggc aaaaccgcaa aatgcgttta
     6481 aatatgcagt ttacactacc cttgcttcgg ttgccggtgg tgttattggt tattttattg
     6541 gcttatatgc taccgattgg gtgcaaggcg tcatcgcaaa ttggggaatg caagcaaact
     6601 ttgataaagc aaaattgtgg tttgaaactt ggggtgtcgc ggtagtattt ttagccggtt
     6661 tttcgccgat tccctataag gtatttacca tctgtgccgg tgtaatgcag atggcgttct
     6721 tcccgtttgt gattactgct gcgatttctc gctttgcccg ttttattttg gtagcaaaac
     6781 tctctgcttg gggtggcaaa aaatatgaac aaaaaattcg ccgctcaatt gaattaattg
     6841 gttggggaac aatcgtttta gccgttgttg cctatataat ttatacatta atgaaataaa
     6901 ttttaaggat ataaaaatga aaaaatcact ttttgtttta tctctgattt cttttgcttt
     6961 agtgggttgt tcaagcaatt cgggtgaatc cacttctgcg gtagaaacaa cagaagcaaa
     7021 tgcaacttgg caatcagcag atagcattca aactgcacca atgcctgcct cgatgaatca
     7081 acctattgcc actcagccaa cctatcagca gccgacttac tctgcaccac aaccaatttc
     7141 ggcagcacca gcaccaatgc ctgtttcaag tggtagtgat agctctcaag ttgaaacagt
     7201 agggaactgc caagtggtgc gtgatgcgaa taatgctcct atctattcac aaattaccaa
     7261 aggctgctac acagaaagtc actatacggt aggtaaaagt gatacgcttt atttaatcgg
     7321 ttatctaacc ggcaccaatg ccaatcaaat tgcgcagcta aatggtttaa ataccggctc
     7381 tccactgaaa gtcgggcaag tcttacgtgt tcgttaatag gcagagaaaa tgaacagaac
     7441 ccttttagca tttgcaattt cttgtgcatt tttgaccgct tgtagctcgc ctactcagcc
     7501 acaagttgaa gatccaaata tgttacctgc aggcacatta caaccgattg aaggctcagg
     7561 cgcaagccaa gacagttaca gttggccgtc tgatattcaa tcaacgtcaa tgcctgacag
     7621 tatgaaataa ttttaggaca atcatttaat gaaaaaacaa tttattcttc tccctttagt
     7681 ctctgctgtt ttggcagcct gttcttcaaa caatccagca ccggtggtga atgcttccgg
     7741 taataacgaa ttaagcccgg gcgtgatgca gcctgttgat gtgagtgcag gtgcaattaa
     7801 ttcaagcggt ggctggcagt ctgatattca atctgcacca atgccaagct cgatgaatac
     7861 cactccggtg caaacaatgc cccagccggt ttcagtgcca caacctgtgg cgactgtacc
     7921 gcagccaatt accaatccgg tgattaccga acaaccacca cagccgacaa ccacgaccaa
     7981 aatcgtgaaa aaaacgaaaa cggtcgagaa aaaagtggat caaaattttg agatcccgcg
     8041 tgatgccaac aatgccccaa tgtacaacca aattcaaaaa gggttctacg atggctctac
     8101 ctataccgta cgcaaaggcg acacaatgtt tttgattgcc tatattgtgg gtaaagatgt
     8161 aaaagaaatc gccgctctta ataatatgag cgaaccttac caattaagcg tagggcaaaa
     8221 actcaaaacc ggcaaatctg caacggaaac tattaccgtg gaagaaaaag tcaccgtacc
     8281 ggttgaacca caaattacct accaacaagg tgcaaacggc acaacctatg cttctggcgg
     8341 taatattact gggccggtaa aagcaggcac agccaacgct gatgtcacgc cggttaataa
     8401 cggtattaaa gcaacaactg caactgctcc ggcagtaact gcttctgtcg gtacagtaaa
     8461 tgcaacagag gaccgtaccg cctccaccat tcgtgctata gatggcacag caagtggtgc
     8521 cgtacaaagt agtaatactg tttctgcacc agcttcatca attaaatggc aatggccaac
     8581 cagcgggcgt gtaatttcag gcttctcctc agcagaagga ggtaataaag gcattgatat
     8641 tgccggcaat aaaggacaag atgtacgtgc tgccgccgca ggtaaagtgg tatatgccgg
     8701 taatgccttg cagggttacg gtaacttaat catcatcaaa cataccgatg atttcttaag
     8761 tgcttatgca cacaacaata ctattgaagt tgatgagcaa gaaacggtga aagccggtca
     8821 gaaaatcgcg actttaggta gtacaggaac caatacgaat aaattacatt ttgaaattcg
     8881 ttacaaagga aaatctgtcg atccggctcg ttatttacca agaaaataag agtaactttt
     8941 tagcataatc cgaccgcttg tgtactacaa gcggtcaatt tttaggaaaa ttatgcaaat
     9001 gaaaaaatat atcgcacaca tgataagttc gttactgctg atagcttgtt cggactaccg
     9061 agcaacacca actagcccaa gcgatgctta cacttgctct ccttcttttc gctactcttt
     9121 cttaaaaaaa acgtgcatac ctttattcag tatagccgac attcaattat tggatccaac
     9181 cgagccttca catcgcattt atattttgtt atctgaagat cgatttcaag ccgaagtctt
     9241 ctcaacgaag ctctctgaat cttctatgtt attggaggcg gttaaaggag gctatatttc
     9301 aaaagacgga aaagttcgtt tactcaaaaa agctgaaggt tggaaaattt actatgagtg
     9361 agactaaaat acgttgtgat tggtgtaaaa gcagtgaaat ttatatgaaa tatcacgacg
     9421 aagaatgggg aaaaccggag tttgacagcc tcaaactgtt tgagaaaatc tgccttgaag
     9481 ggcaacaagc cggactttct tggattacgg tgttgaaaaa acgggaagcc taccgccaag
     9541 cattccatca gtttaatcct gaaaaaattg ccaaaatggg tgaagaagaa attgatttgt
     9601 taatgcaaaa cactagctta atccaccacc gagcaaagtt agaagccatt ataaaaaatg
     9661 cgaaagctta tatcacaatg cagcaaaatg gcgaagactt cagtcggttt atttggtctt
     9721 ttgtgaatta tcagccgcaa attaatgatg taccaacact tgaagctgtt cctgctcata
     9781 cagaaacctc aaaagcaatg tcaaaagcgt tgaaaaaacg tgggtttgtg tttgtaggcg
     9841 agactacttg ctatgctttt atgcagtcaa tggggctggt taatgaccat ttgaataatt
     9901 gcgtgttcaa acataaataa acacaaaaaa ttaggcgacc atttggtcgc ctaacattaa
     9961 ttcagattat tgattgtttt gaacgtaatc aattgctgat tgaactgtag taattttttc
    10021 agcttcttca tctggaattt cgatatcgaa ttcttcttct aaagccatta ctaattcaac
    10081 agtgtctaaa gaatctgcac ctaaatcttc aatgaatgaa gcttctggtt ttacatcttc
    10141 tgctttcgcg ccaagttgat caacaatgat tttttttacg cgttcttcaa tgctcatttt
    10201 gtttttccta tagtgaatat cgcataagtg cgagagttaa atagtgtaat cgaaataagt
    10261 ttaaatacaa ccttttataa aaaggtcaaa ccagactatt cctatacacc agaatatatc
    10321 tgtttttcca ttctatcatt atgtttgtgt ttaatctata gagataaatc aaatttcatt
    10381 tgattaccct actttccgta attcatctcg catttgtgca atcactgctt gataatctgg
    10441 ctggtcaaaa atcgcagaac ctgccacaaa catatctgct cctgcggctg caatgtcggc
    10501 aatgttattt attttcacac caccatcaac ctctaagcga atgttataac cgctctcatc
    10561 aatacgacga cggacttctt tcaatttatc taaggtggac ggaataaatg attgtccgcc
    10621 aaagcccgga ttcacagaca tcaataaaac cacgtcaact ttatccatca cataatctaa
    10681 atagctcaat ggcgttgccg ggttaaacac caagcctgat ttacaaccta aatcacggat
    10741 aagctgtaaa tttcgatcta tatgttccgt tgcttcaggg tggaatgtaa tataatccgc
    10801 tccggctttg gcaaaatccg gaatcaaacg ctcaaccggt tttaccatta aatgcacatc
    10861 aatcgggcat tgaatgccgt aatcacgtaa ggctttgcag atcgccggcc cgaaggtcaa
    10921 attcggcacg tagtggttgt ccattacatc aaagtgaatt aagtctgcac cggcttttaa
    10981 cacctctgcc acatcatcac ccaagcgagc taaatcggca gataaaatag acggtgcaat
    11041 taaataagga ttcttactca tatttcctca ctatcaaaaa ataaatctac gttagattac
    11101 cataatttta acagcgaaaa gagtctctct tcctaaaaat ccgttttttt acaaaacacc
    11161 ataaaaaagt tatggaattg tatttaaagt tcgtatatta tgtatcccat attttaatta
    11221 tggttaatga ccttatctaa attctggaga aaatatgaaa aaagggattc atcctgaaaa
    11281 ttatcgtgaa gtgttgttct atgatgcctc agtgcaacaa ggctgggtta tccgttcttg
    11341 tgcggcaacc aacaaaacaa tggtatggga agatggcaaa gaatacccac tttacacctt
    11401 agatacctca tcggcgtctc accctgttta cacaggtaaa cgccgtgaag tgaatacaga
    11461 aggtcgtgca agtcaattta aagatagatt taaaggcttt gcttcaacgc tttcaaatca
    11521 aaaatagagg ataaaatgaa aatcttaaac tcacttaaaa ccgcaaaatc acgccacccg
    11581 gattgccaaa ttgtcagacg caaaggcaaa ctttatgtga tttgcaaaac caacccgaga
    11641 tttaaagctc gtcagcgtta aaaaccagca ccttaataag ctaatttatt aaggtgtttt
    11701 ttatttcatc ttctcaatat tacctatttt aaccacatca acgattttat tatttcttat
    11761 tccatttagt tatttgcaag cggtcaattt tccccttaaa tttgcaaaaa atttatttta
    11821 ccaattaaaa ggaaatgatt atgttgaaaa aattatcaat tgctgcatta gctcttaccc
    11881 tttctgtttc tgcatttgct aaagagagcc tacttgagcg tataaacaac aaagggacta
    11941 ttactgtggg tacggaagga acttatgccc cttacaccta tcacgatgcg agcggtaaat
    12001 taaccggtta cgatgtagaa gtaacccgtg cggtggctga aaaattagac gtaaaagtgg
    12061 aatttaaaga gacacaatgg gacgctatgt tagccggttt aaaaggtgag cgttttgact
    12121 tagtggcaaa ccaagtggct ttaaccagcc cggaacgtcg agcgacattt gataaatccg
    12181 aatcttacag ctgggacggt gccgccttat tagtgcgtga agatgaaact aaaatcaaaa
    12241 cccctgctga tgtaaaaggc gtgaaaactg cccaaacctt gagctcaaac tatggcgaga
    12301 ttgcccgtga aaacggtgca gacatcgtgc caattgacgg tatggctcaa ggcttactgt
    12361 taattcaaca aaaacgcgcc gatgcaactt tcaatagcca cttatcgcta ttagattact
    12421 tgaaaaagaa cccgaattcc ggcttaaaaa ttgtgtggga aaaagaagaa aaagtgggtg
    12481 caggcttaat tgcgaataaa ggcaatgacg aagcattagc gaaaatcagc aaagcaatcg
    12541 tagaattacg tgaagacggc acgttaaaaa aattgggcga gcagttcttc ggtaaagata
    12601 ttagtgtaca ataatccata ttggattagg cttggggcga attcgcccct tttattttta
    12661 aatctccctc aaaacgggag attttaggtt tttcagatgt taaacgatct acttctctca
    12721 atccccttta tgacccaagc tcgggtcgat ttagtgctaa gcggtttttg gccgatggta
    12781 caagcggcat ttttagtctc tattccgctg gcaatcgcct catttattat cggtatgtta
    12841 attgccgttg cagttgcatt agtgcgaatt agccctgcaa caggcttttt tcaccgcttg
    12901 ctactgtggc tggtaaaagg ttatatctcg attattcgcg gcacgccgat gttggttcag
    12961 atctgtattg tgttttatgg tttgcctgca atcggcattt ttatcgatcc gattccggcg
    13021 gcaattatcg ggttttcact caatatcggg gcttatggct cggaaacgat ccgtgctgcg
    13081 atctcctccg tgccaaaagg acaatgggaa gccggttata ctatcggtat gacttatatg
    13141 caaacttttc gccgtatcat tgccccgcaa gcgtttcgag ttgctgttcc gccacttagc
    13201 aacaccttta tcggtctgtt taaagatacc tctcttgcct ccgttgttac cgtaaccgaa
    13261 atgttccggg ttgctcaaca ggtagcaaat atgtcttatg acttcctacc tgtttatatt
    13321 gaagccggtt tgatttattg gtgcttctgc tgggtgctat ttttaattca ggcgagattg
    13381 gaagtccgct ttaaccgatt tgtggcgaaa taaggaggaa ttgtgcttaa aattcgcaat
    13441 attcataaaa cctttggcaa caacgctatt ctacgcggca ttgatttaga tattcaaaaa
    13501 gggcaagtgg tagtaatttt aggcccttcc ggttcaggca aaaccacctt tcttcgttgc
    13561 ttaaatgcac tggaaatgcc cgagcaaggc acattggaat ttagtggtaa tgctccgctg
    13621 aaaattgatt ttgccgtaaa acagagcaaa aaagagattt tagcgctacg ccgcaaatcc
    13681 ggtatggtgt tccaaaacta caacctgttc ccgcataaaa ccgcattgga aaatgtgatg
    13741 gaaggaccgg tatttgtgca acaacaagcg gtcgaaattg ctcaaaaaaa tgcaaaagcc
    13801 ctgttagaaa aagtcggact ggcggataaa gcagaactct acccgtttca actgtcaggc
    13861 gggcaacagc aacgggttgg cattgcacga gcattagcaa ttcagccgga gctgatgtta
    13921 tttgatgaac caacttcggc acttgatcct gagttagtgc aagacgtgct aaatacgatg
    13981 aaagaactgg caaatgaagg ctggacaatg gtcgtggtta ctcacgaaat caaatttgcc
    14041 cttgatgttg ccgatgtagt ggtggtaatg gacggcggtg aaatcgttga acaaggctcg
    14101 ccacagcaac tgtttaacca cccacaacac gaacgaacta aacgtttttt aaatcaaatc
    14161 agagcggata aataagaaac gatagcgcta gcgtccacgc tagtgctatc taataaatgg
    14221 tacaagcggt taattatgta taaattgtta tactgttttg gcacgagcgt ggacgctcgc
    14281 gccatcgtac agtaaaatca gctaacaagg ttccccataa aggataaata agacaaggct
    14341 ccttaatctt ttagattaag gagcttattt ttagatttta gaaatccgat ttaagccgca
    14401 gcccatagtc caccaaaaat ttggtagaac aagctattta gtagcaataa gccgaaacct
    14461 agcaccatta ccgagaaatc taacattccc gttcttggca ggagcttgcg gataaaacct
    14521 aacaccggtt cggtaatttg tgctaccgtg tagtctaatg ggtggttgcc ttgagtgacc
    14581 cagctcatta atgcacgaat caaggtggtg aaaaatagaa tttgtccgaa ggttttgacc
    14641 acacttaata agccgattaa tactgctctg ggtaaatcta cgccaaacag aataaactgt
    14701 aacgttacca aagcggcggc aattaatagt gccggaaagc aaatattttt aacggttgga
    14761 atcagcttgc caaccggtga aaccatcggt tcggtaattt taagtaaggt ttgtgaaatc
    14821 ggtaaacgag gatcaacccg acaaaattgc agccaagttc ttagcaccag cacaaaactt
    14881 aaaaagccaa caataagcga aataacagga gctaaaaatt ccatctcttt ttctctttct
    14941 atacaaaaca agcggtcgtt ttttagaaaa aatttgcaaa ttttcagtaa aatctgaccg
    15001 cttgtatctt attaaattaa ctaggcaaat taagcttgtg ctgggtagtc ccaccaaata
    15061 tcaaataatt cgctcacttg aacctctttt aagccgttag tttctaacca agttttcact
    15121 aattggcggt gagattcatc acatttgcct aatttttcta agcagactaa accttcccag
    15181 tttaagtagc cgttcgcttc aagggctaaa ccgtttggtc gaatcacttc atcgataaaa
    15241 cgatctacgg tttcatcaat ttggtcaatg cctgtgcctt cagcaaaggt gaatttaatt
    15301 aagaaaccta attcttggta ttcacctaag tgcatttttt tacgttggcg tgcgttacgt
    15361 tgaatagcca ttttttctct cctctatgaa taaatcattt ctttgtaaaa tataaatccc
    15421 acaccccgtg tcctaaacga tgccctcgct cttcaaattt ggttagcggg cggaaattcg
    15481 gacgtggaat aaaatcatta gttgctgatg tattttgcaa ctcgctctca aattggcgta
    15541 atacttcaag catatgttct gcgtaatttt cccagtcggt ggcaaaatga ataaagccgt
    15601 tagggcttaa ttttctgatc acacggctga taaattcagg ctgcacaata cggcgtttgt
    15661 ggtgttttgc tttttgccaa gggtctggga agtaaagctg taagccacct aatgtaccgt
    15721 cagcaatgct gtctcgcaaa atttcggtgg catcgtggca aattactctt aaattcttca
    15781 cgcctttttc taacgcataa gcgatacaag cccccacccc gggcgtgtgc acctcaatgc
    15841 cgatatagtt gcgattcggg ttttgctctg ccatttccac cagcgatttt cccattccga
    15901 agccgatttc taacactacc gggttgttat tgccgaaaat ctgctcaaaa ttaaagggca
    15961 ttggctggta atctaagcct aaatttgccc agttgttgtt catcatatca cgttgataat
    16021 cgctcaaacg accggtacgc aatacaaaac tccgcacttt tcgtaaataa cgcccatctt
    16081 cggtaaactc ggcttgctca acggttttac gttttttatc tgcaaaagtc tgtttttctg
    16141 acattttctt gccttaaaac ttcactaata ccgaacccca agtccagcca ccgccgaatg
    16201 cttcaaggag tagtaattgc ccacgttgaa ttcgcccgtc acgcaccgct tcatctaatg
    16261 ccaccggcac tgttgctcca ctggtattgg catatttatc aagggtaacc accacttgat
    16321 ccatttccat ctctaatttt ttcgccgttg cggtgataat gcgtaaattc gcttggtgcg
    16381 gaatcagcca atctaaatcg gatttttgta gattattcgc ttctaaggtt tcttctacca
    16441 cgcttgaaag ttggtttact gcaattttaa aggtggcatt gccctgcatt tcaataaagc
    16501 cggaacgctc ttcgccacgc ttttggcttc ttaaggttaa gttattttct aaatccggtg
    16561 aggcgtgcaa gtgggttgaa ataataccca gctcttcact cgcctctaaa atcaccgccc
    16621 cagctccgtc accaaataat actactgtgc tgcggtcggt ttcgtctaac attctggaat
    16681 tgatgtctga accaataacc aatgcctttt tcacttgccc gttacgcacg aattgatcgg
    16741 caacagttaa agcatacaca aatcctgtac aagccgctgc cacatcaaaa gcaatcgcgt
    16801 cttcaatctg aagcaagcct tgaatttggc aagctgcact tgggtaagcg tgggagttgg
    16861 tagttgttcc caccacaatt aaatcaatgt catttgcctc aattcctgcc atttccagtg
    16921 cttgttgagc ggcttttgcc cccattgttg ccactgtttc gtcaggctcg gcaatacggc
    16981 gttcacgaat gccggaacgg gttacgatcc attcatcaga ggtatcgacc attttttcta
    17041 aatcagcatt ggtacgcacc tttgtcggta aatagcttcc cgttgctaaa attctactat
    17101 tcatattttt attattctca atcaattaaa tgataatccg ttattatagc ttgaaaacca
    17161 acaaatatat aggctttaca agcggtcatt tttagcaaaa aagttgcatt cacgaacgat
    17221 tttgcactag aaccaccgct tgctagtatt tatttcgctt gagcctcttc gtatagccac
    17281 ttcgctactc gcttggcgaa ataagttaga ataccgtctg ctcctgcccg tttaaagcag
    17341 agtaatccct ccataatgca ctcacgctct ttcagccagc cgttttggat tgccgccata
    17401 tgcatcgcgt attcgcccga aacttggtag gcgaaggttg gcacgccaaa attctctttc
    17461 acacgccaca ccatatccaa ataaggcata cccggtttca ccatcaccat atctgcccct
    17521 tcttgaatat ccatcgccac ttcgtgcaag ccttcgttgc cgttagccgg atcgacttgg
    17581 taagtgtatt tattaccgcc ttttaagttg ccggcagaac ctactgcatc acggaacggt
    17641 ccgtaataat tagacgcata tttagccgaa tacgccataa tttgcgtatt gataaaaccg
    17701 ttttgctcaa gggcttcacg aattttgccg attcgaccgt ccatcatatc gctcggggca
    17761 acaatatccg cccccgcttc tgcgtgcgat aacgcctgtt ttaccaatac ttcagtagtc
    17821 acatcattca gtacatagcc tgtttcatca ataatgccgt cttgtccgtg cgtggtaaac
    17881 gggtctaacg ccacatcagt aatcacgcct aattccggaa attgagcttt taaagctcgc
    17941 acggcacgct gtgccaaccc ttgcgggtta taggcctctt ctgccatcag tgattttttc
    18001 acatcaccca ccacagggaa aagagccacc gcaggcacgc catatttaac cagttctgcg
    18061 gcttcaacta aaagctggtc gatagttaaa cgctctacac ccggcataga aggcacttgt
    18121 actcgctgat tttccccttc gatgacaaaa acagggtaaa tcaaatcatt aacggtaagt
    18181 tgattttctg ccactaagcg gcggctgaaa tcgtgcttgc gtaaacgacg catacggcgt
    18241 aaaggatatt gggattgaat tacttgcatt tttaatttcc taattcttaa aatacctatt
    18301 cttgaaataa gaaaggcata gcaaacaggt gctatgcctt ttcaaaatat tactgtgcaa
    18361 cctgctctga tggttcatca tcatctttgg ggcgataaaa ccgagcaaat agcacaccaa
    18421 cttcaaacaa taaacacatt ggaattgcca ataatgtttg cgagaaaata tctggtgggg
    18481 tgagcaacat accaattaca aatgctgcca caataatata agggcgtttt gcctttaaat
    18541 cttcgggtgt ggttacgcct gcccaacata acaagataat cgcaaccggc acttcaaagc
    18601 agatcccgaa tgccataaaa atggttaaaa cgaaatcaag atagctacta atatccgttg
    18661 ccattgttac cccttccgga gcggtagagg ttaaaaagcc aaatacaagc ggaaatacaa
    18721 cataataggc aaaagcgaca ccacaataaa acagcaatgt gctagatacc aataatgggt
    18781 aaaccaaacg cttttcctgc ttgtataaag caggggcgac aaacgcccaa atttggtaca
    18841 aaataaaagg aactgataaa aacaccgaaa ccacaatggt taatttaatt ggggtaaaaa
    18901 acggagtggc tacattggtt gcaatcattg ttgcaccgtc tggtaaattg tccgttaaag
    18961 gtgttgccaa taaggtgtaa atatcattgg cccagtaaac caatccgcaa aacaccaaga
    19021 gcacacagat aaaactacgc agtaatcggt ttctcagctc aattaaatgt gtaatcagag
    19081 gttgagactc atcaacttgc gacattattt gcctccgatt tctgcgctga ttctgatgat
    19141 tgaggcgtag ctaaatcatc atctggcgga tagtaagatt ccaacgttaa aagcgattcg
    19201 tccatttctg cttgttcagc cagctcatca gccgaaagtg gcttttctgt ccgcgtaaca
    19261 ttaagttgct cagataaact atccacttca agcggtttat tttgcgcatt tttttgcaat
    19321 tcttgcgcct ctaacacctg gctttcttgc tcgatttttt gctgaatttc tgcgacttgc
    19381 tcatcggtta atttaggaat tgtgctgctt tccgcagccg ttttttccaa ctcatttttt
    19441 gcagaattaa gcgaatcttg caactgggtg gctgacattt tcagatcttc caccgtttta
    19501 tttaattctg gcgaaaggga gcttaaattc aactcttctg cctttttaat gctctctttt
    19561 aattcttgca gtttcagctc ttgagccagt tcattttgta cgtttgcggc taaacctcga
    19621 attgtactca cccagcccat tacggtacga atcgcaatcg gcatacgttt cgggcctagc
    19681 accaccaagc ccacaatcat aatcagtact aattcagaaa aacctatatc aaacacggat
    19741 taagcctgct ctttctcttt tgctttctgc tctgctgaaa ttgcatcttt tgcttccact
    19801 ttttcaaatt cagcatcttt tttctcatct gccattgctt ttttgaagcc ttttacagat
    19861 tcgcccaaat ccgaacctaa agtacgtaat ttcttcgtac cgaaaagtaa tacgatgatt
    19921 gcaaccacaa tcagaagctg ccaaatacta ataccgccca taaaaactcc tttcatttaa
    19981 tagggaatag ataaaataaa acgctgttta ttatatgtta ctttgacata taaaaaagta
    20041 attttgcaaa aaatttgtca aaaacaaccg cttatttgcg ttgactcaaa atcaatacca
    20101 gtggaaataa agttaataac ggcacactta gccatatcgg caaagattca aatttccaaa
    20161 atgcgccaca gatcacaatc gctgaaattg acagcacaag aaaacggcta tttgcgtttg
    20221 aattctgtgc ttttaaactt tcgttaattt ccgctaaacg gaaattaatt tgcttttgct
    20281 cttgtaaggc tttaaacaat gcctccggaa actccgcaaa atgctcccga tattgcggta
    20341 aacgttgctt aatgtctcga accatcgctt tcacacctac ctgctcattc agccagtttt
    20401 gtaaaaacgg ttttgcggtt tgccataaat ccaactgtgg ataaacctgc ctgcccaaac
    20461 cttcaatata aagaagtgtt ttttgcaaca acaccaactg cggctgcact tccatattaa
    20521 attctcttgc cacattaaac aggttgagca aaacgtgtcc gaatgaaatt tccgataacg
    20581 gcttagcaaa aatcggctca catacctcac gaaaggcttg ctcaaattta tcaatatcgg
    20641 tatccggcgg cgtccagccc gattccacgt gcattaaggc aacacggcgg taatctcggt
    20701 tgaaaaatgc gacaaaactt tcggctaaat agcgtttgtc attgtggttc aacgtgccga
    20761 caatcccgca gtcaatgccg atatattgcg gattttccgg gtgttctctg ttcacaaaaa
    20821 tattgccggc gtgcatatcg gcgtggaaaa aactgtcacg gaatacttgg gtaaaaaata
    20881 cctgcacacc acgctctgcc agcaatttca tatcggtgct gttcgcttcc aactcggcaa
    20941 tgttagacac tggaatgcca taaatccgct ccatcgcaat caagttttta tggcaaaaat
    21001 cttgatacat ttcaggcaca tacagcattt cgctattttc aaaattcgcc cgaagccgaa
    21061 tggcattgtg catttctttg cgtaaatcca gctcgtctaa aatagttttt tcgtactctc
    21121 gcaccacttc aaccgcccgt agccgtttgc cgtcattcga taatttcggg ataaagtgag
    21181 caatttcata catcaactct aaatccgcct taatcaccgg ctcaatgccc gggcgaatca
    21241 cttttaacac cacatctttg cctgcaagcg gttgattttg gttaaatttt gccgtgtgaa
    21301 cctgtgcaat cgaagcagaa gctaaggcag tttcatcaaa gttttcaaac caagtttcaa
    21361 gctttccgcc caaagcctgc tcgataattt gacgagcgat tttgccgtca aacggttcaa
    21421 cattatcttg tagcaaggcg agctggtcgg caagctccgg tgcaaacaga tcacgtctgg
    21481 tagctaacat ttgcccgagc ttgatccaaa ccggtccaag ctcttgcaaa gccaaacgta
    21541 aacgtacacc gtaaggtttg tctgaatgtt gattcttcac ccaaaacaaa gccttacgcc
    21601 ctagctttat tttgcgggta attggcagat tcggaatggc ttcatcaata ccatagcgaa
    21661 gaaaagtgcg gataatatgg taaaagcggt tgagattttt gatgttcatt gaaatatata
    21721 tttaatggta attaggaaga ttttagcaaa attctgtaaa aatttaaccg cttgttgggc
    21781 tactatgggt atttctgctc aaaattctca atttctttct gtacttccgc aataagtgtt
    21841 tgttcagagg ggaggtaaag ttggtattgg ctggcaaaaa ttttattctg attttccggt
    21901 agcgaaaatt ttaccaccgc atcattttta tcggcacaaa gcaagacacc aatagtggca
    21961 ttttcgtgcg gcagtttttc aactcggtca aaataattga cgtacatctg taattgcccc
    22021 aaatcttgat gggtgagctt gtgggtttta atttcaaaaa tcacaaaaca ttgaagtaaa
    22081 cggttgtaac aaaccaaatc gacaaaaaaa tcatcaccgt ctaggtgcaa acgcttttgg
    22141 cgtgcgataa acgagaaacc gttacccaat tctagtagaa aatcctgcaa atgcgtaatg
    22201 atggcttgct ctaaatcctt ttcgtaataa gcactttccc gttttagtcc gagaaattcc
    22261 aataccatcg ggtctttaat gagctgtttc ggatcaaccg gctgctgctc atttctggca
    22321 acagcaagca cactttcctt atcattactg agcaataatc gctcgtatag actactatta
    22381 atttgccgtt ccagctggcg tgaactccaa ttattcttac aactttcagc caaataaaat
    22441 tcccttttgt cagaatcgga gatttgaatt agacgacgat attgtgtcca attcaattgc
    22501 gaccgcagtg cggtcgcaat tggaaacgca cgataaaact ggcgataacg ctctaattga
    22561 cggctacaaa aaccacttcc aaattctggc tcaagctctt ttgcgagcat tttaatcagg
    22621 tatgttccat aatcagcacg ctcttgccct tgttgctcct gttcaaaaat ccgttttccg
    22681 atgtgccaat acatcagcac acgttggaaa tctaccgcac gaaccgcatt ttcacgagct
    22741 tgagcaataa tttgtttaat atcttagatc atcgttgttt ctattaacat aaaagcctcc
    22801 gttttggatt aagtttatgc ttaatctatc cggaggcaat ttctttcact caacttttcg
    22861 agtcatatca caattttatt ttgttaaatt taattttgca caaacgcttg cgtttgaaca
    22921 tcagctttgc tgatggctcg aagagcgaac gtagtgagta aatttttgct ctaatttgag
    22981 cgcttgttgg gcaagttctt cgacttggtc atagaaatgc accgcctgta aacgatgcac
    23041 caacaccggt ctttcttgga ttaaattctc aaccaaatgt tgattatttt gctcaaattg
    23101 agcttttact ttacctagca attttttagc aagatcggtg ctagtttgag ccactacatc
    23161 gccaacaaaa ggggaaagca gttcggcagg gtctttttcg agctgttcaa gtaatgcagt
    23221 gaaatgttgc aacacttgaa tatcgcccgt cagcaccaac gatttattat taatcagctc
    23281 ggttaatttt tgcttatccg ctagtttcgg cagggtgtca aatgccagtt gcaccgtaca
    23341 atctgcttcc ccctcgtagt tgccaagcca atcggttcgg ctttcgctaa acaacacaaa
    23401 aaagtcgatt ttaggcgaag ttagggcgat ttttagcact tttccggaca atttacgcaa
    23461 attcggctca atatgaggcg agcgtttaag taacgcatta aaagcggttt caatcagacc
    23521 aaaggtaaat tgcgggagca ttaattgttg ttttacatta tttaacattc gtacctactt
    23581 accctcttca cttttgggag aaggatagat tgttcttcat taagaagcaa aatcagggag
    23641 aggggtattt gcaaaatatt gaataaatat gaccgcttgc cccctctctc tgcttatttc
    23701 gctaaacgct cataagcggt ctctctccca caaagggaga gagtcattta agagaaaact
    23761 aaaatttata acctctgtgt aatgccacaa tgccggcact taagttgtag taattcacgc
    23821 tttcaaagcc agtttgttcc atcattgctt ttagctcgtc ttgtttcggg tgcattcgga
    23881 tcgattcagc taaatagcgg taactttcgg cgtcatttac caccacttcg cccactttcg
    23941 gcaaaatatt gaatgagtag aaattataaa gctggctgat tgggtcgata atcggttttg
    24001 agaattccaa cacaagtaag cgaccgcccg gttttagcac gcggaacatt gaacgtaggg
    24061 ctttgtcttt gtcggtaaca ttacgcaagc caaaactaat cacaatacaa tcaaaagtgt
    24121 tatcagcaaa aggcaagcat tcggcattcg cttgaacgta gctcacattt ccaaccacgc
    24181 ctaaattgcg taatttttcc cgcccgactt ccaacattga gctgttaata tcggctaaaa
    24241 tcacctcacc actttcacca acaatgcgag agaattttgc ggtaaaatca cccgtgccgc
    24301 cggcaagatc cagcactttt tgccctttac gcacgccact gcaatcaatg gtaaagcgtt
    24361 tccacactcg atgaatgccg aaagaaagca aatcgttcat taggtcatat ttgcctgcca
    24421 ccgagtgaaa cacatttgcg accagttgct gtttttcttc tttcgctacg gttttaaacc
    24481 caaagtgggt ggtttctgcc gattgttgca cttcttgttg cacttcatct ttaggtgcta
    24541 attgttctac atcgctcatt ttcttgtctc tagttgcaaa atttaggcgt aaccatagca
    24601 aaaaagcggt cgtttttctt taactttttg caaattttct taagtaaata accgctttct
    24661 tgactagaaa agccaaattc tgtaacattc gcacactatt ttttcttgag gattacacat
    24721 tttggacagt catagtcgat acttacccgt ttaacctatc ttgtctaacc tcaatgttac
    24781 cgacaaggtc ggtaatgctc gcctagtatc tttgttcctt tttgttccaa gcctcctaac
    24841 tatttggagc taaacatgat ccgtgctttt ggactagata acgcatgttt aatcagcgtt
    24901 gatgaaacta acccaacttt attaaatgat gcgatttgga ttgatctcat cgatccatca
    24961 gaagctgaac gaaccgtatt agaaaaccgc ttagaccaaa cactcgctga agaacgtgaa
    25021 ttggaagact tagaggcgtc tgcccgtttc tttgaagatg aagacggttt gcacctgcac
    25081 tcgttctttt actgcttaga tgatgacgat tacgccgata ttgccactgt cgccttcact
    25141 attcgtgacg ggcgtttgtt taccttgcgt gatcgggatt tacccgcatt tcgcttgtat
    25201 cgaatgcgtt cccgccgtga gaaattgatt gacagcaacg cctatgaact cttactcgat
    25261 ttatttgaga ccaaaatcga gcagcttgca gacgtaattg aagaagtcta tgctgactta
    25321 gaaaaattaa gtcgggttat tctaaacggt cagcaagaaa atgagaattt caatgatgcc
    25381 ctttctcgct taactgaatt tgaagatgca agttcaaaag tgcgtttatg tttgatggat
    25441 acgcaacggg cgttaagttt cttactgcgt aaaacccgtt tgccgaataa tcagctagaa
    25501 caagcccgtg acattatgcg agatattgaa tctctgcaac cgcacaatga atccttgttc
    25561 caaaaagtga attttttaat gcaagcggca atgggttata tcaatattga gcagaaccga
    25621 attatgaaat tcttctcggt ggtgtcagtg atgttcctac ctgctacgct ggttgcttct
    25681 acttacggta tgaactttga atttatgccg gaacttcatt tccaatatgg ctaccctatg
    25741 gcgattggtt taatgattgt tgccgcctcc gccccttatc tttattttaa acgtaaaggt
    25801 tggttataat ttatttttaa agcctatagt tgaataactt aggctttctt attttaatga
    25861 atatgttcac ctctaaaaac aaataaagat taaaactgt
//
LOCUS       DANLXO010000026        24960 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.026, whole genome shotgun sequence.
ACCESSION   DANLXO010000026 DANLXO010000000
VERSION     DANLXO010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24960
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.026"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(225..2414)
                     /gene="yccS"
                     /locus_tag="PXD69_000903"
     CDS             complement(225..2414)
                     /gene="yccS"
                     /locus_tag="PXD69_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HDL6283119.1"
                     /translation="MNKFLRYLQHSWLSENVIKTLPMFISLNIAAVSIWQLGISDFAM
                     PLMLGIIAGGLVDLDNSLIGRAKNLIISLVAFSLSSIGASVSLHLGWLFVPVAVVCTF
                     LLVMLGAIGQRYSTIAFGTLIVAVYNSLAYTPEVLWYHNVVMILLGTLLYGLVGILVY
                     LIFPNRTVQENLASAYLALSHYLLAKSAYFDPDDDDLAAKQLALAKANSEVMAAFDKT
                     RVALFYRLSRQHKQQRTQRMLRYYFTAQDILERASSSHYQYHELFQQLSNSDLMFRFQ
                     RVLELQAAACQKIAMSLRHREVYEHGVRGEKALQGLLNSLNYHQERGLKSAYRWRAIA
                     ENLGNIERQLAQIEQGSSSGEHIEPLSKNFTKSHRLIAENITGLSNISQAIKAHLTFE
                     SQLFRHAVRLSIVVLLCSAIVPILGFDSKGYWILLTAIFVCQPNYTATKTRLIQRVIG
                     TIFGVLVGGSFELFNVALSLEAQLGLIVLTGSLYTFFRLVHYGFSTFYITVLVMISLD
                     IAGVSLESGILMRMLDTLLGTAIAWLAVAFLWPDWKYLNLQRNLHNGLKASGQYLRHI
                     IAQLQFGYNEQLPYRIARRDVHNHLSALSNAITNMYSEPQKYANDLTFAPKLLGIAYT
                     LLGYISTLGAYRIASREINQQVDFSAMFFSHAREVANIIGQIASESRSFAKLSEKLTA
                     IDQDLTQFEQENQQKQNDLALVLIQQLRLIVQLLPQLNSILQLKSVR"
     gene            complement(2458..2916)
                     /locus_tag="PXD69_000904"
     CDS             complement(2458..2916)
                     /locus_tag="PXD69_000904"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HDL6283120.1"
                     /translation="MKTTVRTIAKQKQIALVAHDSCKQDLIRWTQTHQAQLASHKLYA
                     TGTTGHLLARETGLEITSLLSGPMGGDQQLGGLIAEKKIDLLVFFWDPMNAAPHDPDV
                     KALMRIATVWNIPVAINETTANFLLNADLFNQAISVNVPDYDGYLAERLG"
     gene            3042..4316
                     /gene="thrC"
                     /locus_tag="PXD69_000905"
     CDS             3042..4316
                     /gene="thrC"
                     /locus_tag="PXD69_000905"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDL6283121.1"
                     /translation="MNLYNIKHPEEQVNFAQAVRQGLGKNQGLFFPEVLPKLDSIDEL
                     LDLPLVKRSQKILSALIGEELPQETLNAMVKNAFTFPAPLAKVNDDIYALELFHGPTL
                     AFKDFGGRFMAQALANVRGDGKITILTATSGDTGAAVAHAFYGLENINVVILYPKGKI
                     SPLQEKLFCTLGGNIRTVAIESDFDACQALVKQAFDDAELRQAIGLNSANSINISRLL
                     AQICYYFEAVAQLPKEKRDNVVVSVPSGNFGNLTAGLIAKTLGLPIKRFIASTNANDT
                     VPRYLQSGKWEPNATVATLSNAMDVSRPNNWPRVEELFKRNGWSLSELGSAALNDAET
                     EAALKAQYAEGYLCEPHGAIAYQSLKDQLQQGETGIFLCTAHPAKFKESVEHILAIEL
                     PLPEALDKHNKLPLLSDEMAADFATLRAYLLK"
     gene            complement(4395..5129)
                     /locus_tag="PXD69_000906"
     CDS             complement(4395..5129)
                     /locus_tag="PXD69_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDL6283122.1"
                     /translation="MSFKDMTGQKVPSVTFRTRQNDAWVDVTTDELFNNKTVVVFSLP
                     GAFTPTCSSTHLPRYNELACEFKALGVDDIICMSVNDTFVMNAWKADQESENITVIPD
                     GNGEFTEGMGLLVDKNDLGFGKRSWRYSMLVKNGIVEKMFIEPQEPGDPFKVSDADTM
                     IKYLSPNWTAKESVSIITKPGCLFCAKAKALLKEQGYTFEEIVLGRDASTISVRAITG
                     KTSVPQVFIGGKYIGGSDELAAYFAK"
     gene            5244..6128
                     /gene="oxyR"
                     /locus_tag="PXD69_000907"
     CDS             5244..6128
                     /gene="oxyR"
                     /locus_tag="PXD69_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HDL6283123.1"
                     /translation="MNIRDLEYLIALAEHKHFRRAAESCNVSQPTLSGQIRKLEGELG
                     TILLERTSRKVLFTQAGLTLVEQAKVVLREVKILKEMASNQGKEMSGPLHVGVIPTLG
                     PYISPIIVPALKAEFADLELYIYELQTNQLLDQLESGQLDCGIISFVKESESFIEVPI
                     FNEEMYLVVPEQHEWAALKKFDMNLLKNRELLFLDSGHCLRTNTLDYCLSIGAKENPH
                     FKATNLETLRNMVAANVGLALIPKLAAKPIKGVHYIPLENPKPFRAVGMVYRPGSPLR
                     ARYERLAQAITKIMQSEA"
     gene            6131..6763
                     /gene="fabR"
                     /locus_tag="PXD69_000908"
     CDS             6131..6763
                     /gene="fabR"
                     /locus_tag="PXD69_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HDL6283124.1"
                     /translation="MANGMSVRAIQKEKTRRALVEAAFNQLSSEKNFSNLSLREVARE
                     AGVAPTSFYRHFKDMDELGLAMVDESGLLLRQLMRQARKRIANGGSVVVVSVETFFEL
                     IADRPNVFQLLLRESSGTSQAFRTAASREIQHFVAELADYIMSKDNHSNRELAYIQSE
                     GLVTLVFTAGSHALDMNNQEREKLKQRVIMQLRMLIRGSTYYANKQASST"
     gene            complement(6790..7089)
                     /locus_tag="PXD69_000909"
     CDS             complement(6790..7089)
                     /locus_tag="PXD69_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HDL6283125.1"
                     /translation="MKKADIQKMQDCYNQWVELLPELEKGIEQWKRASALLEPLSRFY
                     ASPEWRELHDSFDEQLDTKGNYSILSEDALWNALSEHHQLALEWLKLSTAYITKE"
     gene            complement(7178..10993)
                     /locus_tag="PXD69_000910"
     CDS             complement(7178..10993)
                     /locus_tag="PXD69_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL6283126.1"
                     /translation="MKGSGLATVGAPETGDNGQTIYTVDVAKAGAPTVTRGNVADAIN
                     NSEKTSSVVAGSKAVTVKAGKEDDKGNTEYTVDVATDKSIGRDNDGNMTVNTDNVTIV
                     KDPTTGEVKANTTTLNNSPEGKVTEPTGDDAKKLVTAGDIANAINNSGFNVTAGDGVD
                     GGETKGKKTQLIKPSETVTFDAGKNMTLTQADGKFTYTTKDNVAFNSIDMSNGKPDTT
                     GSITNLKSGVGGTFADKAAPTDAERKAIADNINNATGDTLNNAVNVGDVQAAMKAATT
                     KVEGDKGVTVTSKTNDDGSTTYTVEAKTDGTTIKVNDKGEITANTSELTNNPDGKVEE
                     PTEPNALVTAKTVADAINNAGFNIKANGDEKSLVKTGDTVQFLNGKNIEITRDGNNIT
                     VSTAKNVNFDSVQFGNEGPKITNNGGNINVGDKDGNAVKVTNVAAGDVNADSKDAVNG
                     SQLYTFAMASREEVKSTDKSVTVNTTKNADGANVFDLSVNTDDVTIVKDPTTGAIKAN
                     TTALNDANNDGRIDEPTADDAKKLVTAGDITNAINNSGFTLKTSAVEGGEKLSGGDEL
                     INPGKAVEMVAGKNLTVKQEADGKVIYATKDDVKFSSVTSNTVTVPTDEADPANNPIT
                     INKDGINAGNKAISNVASNLIPVTADDKVQPADNNPTNLADKLSNAATLGDVLNAGWN
                     LQGNGKAVDTVVHNDTVDFINGKGTTVTVENKDGKNTIKVDSPIEFVNQDPTDSSTPS
                     NTAKFTGEAPVQLGNVASSVRNEDGSTPEGKDRAEAIKNAEGDKLNNVVNLGDLQAAT
                     NAATTKVGGNRGVTITPSTNADGSTTYNVEAKTDGTTIKVDNEGNITANTSELGNNED
                     GTVKAPTQPNALLIAQTVADAVNNAGFNIKSAGNKAAGDQAATKLVKTGEEVVFEAGD
                     NLTVKRDGNQFTFATAKDVSFNSVQFSENGPKITNDGDNIKVGDKDGKPTKITNVADG
                     DISPVSTDVINGKQLNNYAKVNGNNIGTDEDGSINIVNGNGTTITSDKAGEVKVNVNI
                     TDLTVADNGKINVQDPNGTGSRFVNATTVANAVNNVSWNVDSKAVGTGAVEGDKAPAK
                     VKAGSTVSVNAGNNIKVTRKGSDVTVAVSDTPEFTSKTGDTLVNNNGVTINNGSAGKA
                     VSLTKDGLNNGGNRITNVKAGEADTDAVNVGQLKGAVNHLNNKIHRNNREARAGIAGS
                     NAAAALPQVYIPGKSMVAAAGGTFKGENALAVGYSRSSDNGKLILKLQGNANSRGDFG
                     GGVGVGYQW"
     gene            complement(10956..11441)
                     /locus_tag="PXD69_000911"
     CDS             complement(10956..11441)
                     /locus_tag="PXD69_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283127.1"
                     /translation="MDTGSITVDNTTGAVTTPAEEDKVATTKTVSEAIQKAGWNAKSG
                     GNKADGDQEAAELINPGEKVIFAAGDNLKVKRVGTIFTYETAKDVKFDSVTFGDNGPK
                     ITNKDGNVNIAGNDGNPTKITGVKAGEADTDAVNVSQLKQAAASQNRSERFRFSNCWC
                     T"
     gene            complement(11450..13609)
                     /locus_tag="PXD69_000912"
     CDS             complement(11450..13609)
                     /locus_tag="PXD69_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6283128.1"
                     /translation="MGARATSANAIALGTDTAATGNRATAFGAGALATGNRSTVMGWR
                     SAASGTRSFAMGSGAMGDKSVANATYSLALGSSANANATSTATRGTAIGYNATVSGVN
                     ATALGVSAVSSNQSTVAIGDSAKASAGFAIALGSGANVALNNSVALGSNSTVSNAVAV
                     PSATVNGITYSGFAANTTAAGNVVSVGSNTIKRQIQNVAAGQISATSTDAINSSQLYM
                     AMNATGNLANSTKNILGGNATVKPDGSVTYTNIGGTNKNTIEEALKAVKTEVVAGSNV
                     NITNATGANGQTIYTVNAYNTTANSSSPDYITVTGKAATAANTTNYEIGLTKKAIDDF
                     TKDTQATVVSNDGTVTVKSTERNANGTVIYDLSVNIPAQASQIQYFSVNSTVPENQAN
                     DGAKSRNSIAIGPNATATGGEQAAVALGTNSNANGNGALSLGVATVSKGIQATAVGHS
                     ANATANGTTALGRQTNATAGDATAVGSNANATAEKASAFGVAANASANASLAVGANSI
                     ASAQSAVAVGTRANATAQFATALGMGAQATLNSSVALGSESVVRAATPTENATVGGIT
                     YNGFAGVNKDTNYVVSVGSAGKERQIQNVAAGQISATSTDAINGSQLYMAMNATSNLA
                     NSTANNFGGGSVVNPDGSVTQPKYNVTNAAGTQYGNTATNVGDAITNLNNYVNQGFNI
                     KDNAGETKGTVTPNESVQFVNGKGTVSNVTQEADGVK"
     gene            complement(13838..14038)
                     /locus_tag="PXD69_000913"
     CDS             complement(13838..14038)
                     /locus_tag="PXD69_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR domain-containing protein"
                     /protein_id="HDL6283129.1"
                     /translation="MNQIFKVIWNQATQSWVAVSELQRAKGKTKSVSSASKATLALLA
                     GASAVLGANDAVAVVSYRFNNK"
     gene            14402..15556
                     /locus_tag="PXD69_000914"
     CDS             14402..15556
                     /locus_tag="PXD69_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDL6283130.1"
                     /translation="MNQFFPLIFSLTLFSGVTLALEKAPRTMPTEGINKPLLGQILFF
                     DNMLSHNGSQNCSSCHNPDYAFIDNRTTPAKGVVSQGDTPTKFGKRNSPTMLYAKYSP
                     EFHFDEQSQEYIGGQFWDGRAKNLAEQAGMPPIDPNEMGMPNKLEVAKRLYNVPMYQR
                     FLGQFYGEKVWESYESVYAAMEDAIATFQQENKLLAPFDSKYDLFLKGEVQLTALEEK
                     GRALFFNKAQTNCSSCHQLQSAANHQEETFSNYHYYNVGVPGNPDLIAVNGFAPDFVD
                     LGLFENPNVKGDETQKGKFKTPTLRNVAVTALYMHNGVFKELKTVLLFLDSYNNPERK
                     INPETGTAWQQAEFEPTIAHQKLKAKPLSDEEIDALEAFLKTLTDERYRK"
     gene            complement(15604..16593)
                     /locus_tag="PXD69_000915"
     CDS             complement(15604..16593)
                     /locus_tag="PXD69_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL6283131.1"
                     /translation="MNDLIIYNTEDGKSNVALLVVENEAWLTQNQLAELFDTSVQNIS
                     EHIKNILKDKELDENSVIKDYLITAQDGKNYQVKHYSLEMILAIGFRVRSPRAVQFRK
                     WANSTLRTYLEKGFLIDSERLKNPQGRLDYFDELLEQIREIRASELRFYQKVRELFKL
                     SSDYDKTDKNTQMFFAETQNKLIYAITKHTAAELICQRADATKMNMGLTSWKGKVVRK
                     GDIVIAKNYLDNNELDSLNRLVMIFLESAELRVKNNQDLTLGFWRRNVDMLIEFNGFS
                     VLGNGGTITHKQMESFVREQYEKFDIQRKCLKQKEADWEDLQALEKLESELTR"
     gene            complement(16753..18117)
                     /gene="mpl"
                     /locus_tag="PXD69_000916"
     CDS             complement(16753..18117)
                     /gene="mpl"
                     /locus_tag="PXD69_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HDL6283132.1"
                     /translation="MKKHIHILGICGTFMGGVAMIARELGYKVTGSDTNVYPPMSTFL
                     AAHGIEIIPNYDVAQLQPAPDLVVIGNAMSRGNPCVEYVLDNQLNYTSGPQWLHDHLL
                     KDKWVLAVSGTHGKTTTTGMLAWILDQNGIDTGFLIGGVAGNFGISARAGNSPFFVIE
                     ADEYDSAFFDKRSKFVHYTPKTLIINNMEFDHADIFDDLKAIQRQFHHLVRTMPQSGC
                     ILSAIADQNVQDTLKMGSYSQLQFIGEQNEWFAKPLNADCSQFEVFHLGVKQGEVHWS
                     IIGKHNMHNALMAIAAAHHAGVEVQGACEALGKFVNANRRLEVKGEVNGITVYDDFAH
                     HPTAIEATIDALRGKVGKNQRILAVLEPRSNTMKMGVHKDEIAPSLHDAEAVFVYQPD
                     IIAWSVSEITNVLSQPAYWSANIDDLVDLVVKEAKPTDHILVMSNGAFGGIHQKLLAK
                     LADK"
     gene            complement(18413..19168)
                     /locus_tag="PXD69_000917"
     CDS             complement(18413..19168)
                     /locus_tag="PXD69_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDL6283133.1"
                     /translation="MKLKSFKPMFMLLSVAFLTACSSSINPETGVRDDPLEGFNRAMW
                     KVNYDYLDPYVLKPVAKGWKEYVPSPVKTGLINVANNLDEPVSFVNRLIEGEGKKAMV
                     HFNRFWINTVFGLGGLIDWASLDEGLRLNNGQRGLGESLGAHGVPSGSYIMMPAYGAT
                     TPRQGIGSAVETGYSVLTYVGSPWSIAKFVVQGVDTRSKLLEQDALLEQAQDPYVTFR
                     EAYFQNLEFKVKDGNVEQSQQEQLSEEELKNID"
     gene            19323..19640
                     /gene="metJ"
                     /locus_tag="PXD69_000918"
     CDS             19323..19640
                     /gene="metJ"
                     /locus_tag="PXD69_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HDL6283134.1"
                     /translation="MADWNGEYISPYAEHGKKSEQVKKVTVSIPIKVLEILTNERTRR
                     QIKNLRHATNSELLCEAFLHAFTGQPLPNDEDLMKDRADEIPEAAKQKMCELGIDPDE
                     WQY"
     gene            19688..19918
                     /locus_tag="PXD69_000919"
     CDS             19688..19918
                     /locus_tag="PXD69_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF997 family protein"
                     /protein_id="HDL6283135.1"
                     /translation="MYQQLTTEARWAVLLTLIYLLGWVGFAYFSPQGRGIFGFPIWFE
                     LSCIFLPVLFSLVATIVVKKVYKNIDLEVNNE"
     gene            19911..21335
                     /gene="panF"
                     /locus_tag="PXD69_000920"
     CDS             19911..21335
                     /gene="panF"
                     /locus_tag="PXD69_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HDL6283136.1"
                     /translation="MNSEMILPLIAYLIFVFGVAFYAYRKRQGGSFISEYYIGGRSMS
                     GFVLAMTTAATYVGASSFIGGPGAAYKYGLGWVLLAMIQVPAVLLSLGALGKKFALLA
                     RKHNSVTINDMLLARYQNKFVVWIAGLALLLSFFAMMTVQFIGAGRLLETTLGIPYQT
                     AVMIFAITVGLYTFIGGFRAVVLTDTIQGLVMIVGTSILLAGVIYATGGVENAMHTLE
                     AINPQLTTPYGIDERPLDFTFMTSFWVLVCFGLIGLPHIAVRSMACKNSQALHRAMII
                     GTVVIAILMFGMHLSGVLGRAVVPDLKVPDQVIPTLMVQVLPPVVAGIFLAAPMAAIM
                     SSIDSMLIQSSSTLIKDLYLAIKPNAINNEKKIKLFSTITTLTFTVLLVFAALTPPEM
                     LIWLNLLSLGGLEATFLWVIVLGLYWEKANATGAIYSMLAGLSCYVLMTTFKIAIFSF
                     HAIVPSLLIGLIAFLIGNRFAPKV"
     gene            complement(21412..22602)
                     /gene="nhaA"
                     /locus_tag="PXD69_000921"
     CDS             complement(21412..22602)
                     /gene="nhaA"
                     /locus_tag="PXD69_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDL6283137.1"
                     /translation="MEKLKEFLKSEASGGVLLLVFAFAAIVCANTSLSDFYFEFLQTI
                     VSVQFGEFALNKPLLLWVNDGLMAVFFTLVGLEVKKELFEGSLSSYKKAIFPAIAAVG
                     GMIVPAIIYWAINQNHPEYHNGWAIPMATDIAFAVGIVALLGTRVPLALKAFLLALAI
                     IDDLGAIVVIAIFYSQEISVQALTIAAIAIIGLVLLNRFKVTSLCAYLVVGLVLWTSV
                     LKSGVHATLAGVIIGFCVPLKGKHGERPAEELEHILAPWCAYMILPIFAFANAGVYLL
                     EMGMEQLSSPLPLGIALGLIIGKTLGVFGFSYLAVLFRLASLPQGVNFKQIFAIAVLC
                     GIGFTMSMFLASLAFDVSEAGESITALARLGILLGSAVSAILGYTLLRMATKQNNPEN
                     NATY"
     gene            22770..23198
                     /locus_tag="PXD69_000922"
     CDS             22770..23198
                     /locus_tag="PXD69_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL6283138.1"
                     /translation="MTHDWLYWALASALFAALTAIFAKVGLQGVDSDFATFIRTVVII
                     IALIAFLTYSGKWQPLDSLSSKNWLFLILSGLATGLSWSAYFKALQMGNASQVAPIDK
                     FSLVLVTLFAVIFLGERPSGQDWLGIGLVAGGVLLLAFKR"
     gene            23204..23926
                     /locus_tag="PXD69_000923"
     CDS             23204..23926
                     /locus_tag="PXD69_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDL6283139.1"
                     /translation="MQNFANIEIAFIHRKAPLPSDFSYPEMPGGLTEKQVQKWQSRRV
                     AFFLLTELFKKHHLDLDLLADMQRSPSGRTFVDSEQIDFNISHSGEWIAVIFSYSFAK
                     LAVGIDIEHPQKIRRYHDLICHYGNAEEQNVLLANHSPILSNLAERFYLSWCLREAIL
                     KSQGVGIVKLSEVKHLPLEKQIFSAHCPKGKLHFVSELPFYLSYFYQQPQNMLLSEPL
                     LYHWQNGQFQPIKCQSLVYDVN"
     gene            23936..24355
                     /gene="psiE"
                     /locus_tag="PXD69_000924"
     CDS             23936..24355
                     /gene="psiE"
                     /locus_tag="PXD69_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HDL6283140.1"
                     /translation="MPKKSLEEHHSSFGKIASETFQWIMNIALLVTGALLSYSLFAEA
                     YSLYELSFSDSEKFQIVEKIVIFFLYFEFLALIVKYFKSNYHFPLRYFLYIGITAMVR
                     LIIVDHSNALHTLLFALSILVMIIALYIVHTDRLHKS"
     gene            24364..>24960
                     /locus_tag="PXD69_000925"
     CDS             24364..>24960
                     /locus_tag="PXD69_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDL6283141.1"
                     /translation="MKLTQYQHNDLQILNRETVYKGHFELQKITFRHKLFSGEMSGEV
                     VRELLIKGEAAALIAYDPTLDKVVLIEQVRIGAYDAGQKKSPWLLELVAGMVDKGNEE
                     PAEVAMREAKEEAGLEVTTVQHALSVWDSPGGQLERLHLFLGLIDSTQVKSGEVHGLL
                     EEENEDILVHVVSREQAYQWVEDGTIDNVIAVIGLQWLQ"
BASE COUNT         7134 a         5572 c         4745 g         7509 t
ORIGIN      
        1 taaaagacca acctgcgata acagatttaa tttttaatag cttttttgaa tctacttttt
       61 tcataaaaaa atcctcatat attgattaat agataggttt gtgcattgca catctctata
      121 tgtccttcaa aaaaaacaaa acatcaacaa aaaattaaca aaaccataat atttttattg
      181 attttgtgaa gcatgtcaca ttttatgatt taattatagg ctcactacct tacactcttg
      241 agctgtaata tactatttaa ctgcggtaat aactgcacga tcagtctgag ttgttgtatc
      301 aacactaagg cgaggtcatt ttgcttttgc tgattttctt gctcaaattg ggtgaggtct
      361 tggtcgatag cggtcaattt ttccgataat tttgcaaatg aacggctctc tgaggcaatt
      421 tgcccgatga tgtttgccac ctctctggcg tgtgagaaga acattgcgga aaaatccact
      481 tgttgattaa tctctcggct agcaatacgg taagccccta aggtggaaat ataacccagc
      541 aaggtgtaag caatacctaa caattttggg gcgaaggtta aatcgttcgc atatttttgt
      601 ggttcgctgt acatattggt aatcgcatta ctcagtgccg ataaatggtt atgcacatca
      661 cggcgggcaa tacggtaagg cagttgctcg ttataaccaa actgcaactg ggcgataata
      721 tggcgtaaat attgcccact ggctttcaag ccgttatgta agttacgttg taaatttaaa
      781 tacttccaat ccggccataa gaatgccact gccagccacg caatcgctgt acctagtaag
      841 gtatcaagca ttcgcattaa gatgccgctt tcaaggctca cgcctgcaat atcaaggctt
      901 atcattacca acacagtgat ataaaaggtt gaaaagccat aatgtaccaa gcggaaaaag
      961 gtataaagcg aaccggtcag tacgattagc ccaagctggg cttcgaggct gagcgccacg
     1021 ttaaacagtt caaaagagcc accaaccagc acgccgaaaa ttgtgccgat cacacgctga
     1081 atcagtcggg tcttagtagc agtgtaattc ggttggcaga caaaaatggc tgtgagtaaa
     1141 atccagtagc ctttgctatc aaagcctaaa atcggcacaa tcgcactgca caacagcacc
     1201 actatcgaca accgaacggc gtgtcgaaac agttgggatt caaaggttaa atgggcttta
     1261 attgcttggc tgatattgct taagccggta atattttcgg cgatcaagcg gtgagatttt
     1321 gtgaaatttt tacttaacgg ttcaatatgc tcaccactgc ttgagccttg ttcaatctgg
     1381 gctagttgcc gctcaatatt gcctaaattt tctgcaatag cacgccagcg ataagcactt
     1441 ttcaagcccc gttcttgatg ataattcaat gaattaagca agccctgcaa ggctttttcg
     1501 ccacgaacgc cgtgttcata tacttctcta tggcgtaacg acattgcaat tttttgacac
     1561 gccgcagcct gtaattccag cacccgttga aagcggaaca ttaaatcact gttacttaat
     1621 tgttggaaca gttcgtgata ttgataatgg ctggaacttg cccgctctaa aatatcttga
     1681 gcggtgaaat agtaacgcaa cattcgctgt gtccgttgct gcttgtgctg gcggcttagg
     1741 cggtagaata gggcaactct ggttttatca aaggcagcca tcacctcact attggctttc
     1801 gccaaggcta gttgtttggc agctaaatcg tcatcatcag ggtcaaaata ggcagatttc
     1861 gccagtaaat aatggctcaa cgcaaggtag gcggacgcta aattctcctg cacggttcga
     1921 ttcgggaaaa tcaggtacac caaaataccg accaaaccat agagtaaggt gccaagtaag
     1981 atcatcacca cattgtgata ccacaatact tcgggcgtat aagccaggct gttataaacc
     2041 gccacaatca gcgtgccaaa agcaatggta ctatagcgtt gcccgattgc ccctaacatt
     2101 accagcaaaa aggtgcaaac caccgccacc ggcacaaaca gccagcccaa atggagcgac
     2161 acactcgccc caatcgagga aagcgagaac gccactaggc tgataatcag atttttcgct
     2221 cgtccgatta ggctgttgtc taaatccacc aaaccgccgg cgataatgcc taacatcaac
     2281 ggcatcgcaa aatcagaaat accgagctgc caaatgctga ccgccgcaat gtttagcgaa
     2341 ataaacatcg gcagggtttt aattacattt tccgaaagcc aactgtgttg tagatatctt
     2401 aaaaatttat tcatatttgc tcatttcggg caggcacagg acctgcccct acctacacta
     2461 ccccaaacgt tctgccaaat agccatcata atccggcaca ttcacgctga ttgcttgatt
     2521 gaacaaatcc gcatttaaca gaaaattagc ggtggtttcg ttaatcgcca ccggaatatt
     2581 ccaaacggtc gcaatccgca tcagggcttt cacatcagga tcgtgcggag cggcattcat
     2641 cggatcccaa aagaacacca gcagatcaat tttcttttct gcgatcagcc cgcctaattg
     2701 ctgatcgccc cccatcgggc cgcttaacaa tgaagtaatt tcaagccctg tttctctggc
     2761 gagcaaatgc ccggtagtgc cggtggcata tagcttatgc gaggcaagtt gggcttgatg
     2821 agtttgtgtc caacgaatta aatcttgttt acagctatcg tgagccacta aggcaatctg
     2881 tttttgtttt gcgatggttc tgacggtggt tttcattttt agctcctttg caaaattttt
     2941 cacaaatcat accgcttatt tttcgctttt gcattgacta atcacggctt atggctaaaa
     3001 tcaggtaaaa attcgcattt taaaacaaag gattaaccgc aatgaactta tacaacatca
     3061 aacaccctga agaacaagtc aatttcgccc aagcggtacg ccaaggctta ggcaaaaatc
     3121 aagggctatt tttccctgaa gtgttaccta aattagatag cattgatgaa ttattggatt
     3181 tacctttggt taaacgcagc caaaaaattc tttcagcctt aatcggcgaa gagttaccgc
     3241 aagaaacctt aaatgcaatg gtaaaaaatg cgttcacttt cccggcaccg cttgccaaag
     3301 tcaatgatga tatttatgcg ttagaattat ttcacggtcc gactttagcc ttcaaagatt
     3361 ttggtgggcg ctttatggct caagccttag ccaatgtacg aggagacggc aaaattacta
     3421 ttttaaccgc tacctcaggt gacaccggtg cggcggtggc tcatgctttc tatggtttgg
     3481 aaaatatcaa cgtggtcatt ctttacccga aaggcaaaat cagcccatta caagaaaaat
     3541 tattctgtac cttaggcggt aatattcgca ctgttgcgat tgaatccgac tttgatgctt
     3601 gccaagcctt agtgaaacaa gcctttgatg atgccgagct acgccaagcg attggtttaa
     3661 attccgcaaa ttccatcaac attagccgtt tactggctca aatttgctac tactttgaag
     3721 cagttgctca gttaccaaaa gaaaaacgag ataacgtagt ggtttcagta ccaagcggta
     3781 atttcggtaa cttaaccgcc ggcttaattg ccaaaacatt aggtttaccg attaaacgtt
     3841 ttattgcctc aaccaatgcc aatgacaccg tgccacgcta tttacaatca ggcaaatggg
     3901 aaccaaacgc aaccgttgca accctttcta atgcaatgga cgtaagccgc ccgaacaact
     3961 ggccacgagt tgaagaatta tttaaacgca atggctggag tttgtctgaa ttgggttctg
     4021 ccgcattaaa cgatgccgaa accgaagcgg ctttgaaagc tcaatatgca gaaggttatc
     4081 tgtgtgagcc tcacggtgct attgcttacc aaagcttgaa agatcagcta caacaaggcg
     4141 aaaccggtat tttcttatgc accgctcacc cggcaaaatt caaagagtcg gtggaacaca
     4201 ttttagcgat tgaattgccg ttaccggaag cattagataa gcacaacaaa ctgccactgt
     4261 tatccgatga aatggcagca gattttgcaa cattgcgtgc atatttgttg aaataaatat
     4321 tcaataatag aaaagggatt aagtattaaa cttaatccct ctttttatgc attacaagcg
     4381 gttatatttg cctattattt tgcaaaataa gcagctaact catcactacc gccaatatat
     4441 ttaccgccga taaatacttg tggcacagag gttttacctg taattgctcg tacagaaatt
     4501 gtgcttgcat cacgacctaa cacaatctcc tcaaaagtat agccttgctc ttttaataat
     4561 gcttttgctt ttgcacagaa caggcaaccc ggtttagtga taatcgaaac agactcttta
     4621 gctgtccaat ttggacttaa atatttaatc attgtatcgg catctgatac tttaaacgga
     4681 tcgcccggtt cttgtggctc aataaacatt ttttccacaa taccgttttt caccagcatc
     4741 gaataacgcc aagaacgttt accaaaccca aggtcatttt tatcaactaa tagccccata
     4801 ccttctgtga actcaccatt accatcagga ataacagtaa tattttcaga ttcttgatct
     4861 gctttccaag cgttcattac aaaggtatca ttaactgaca tacagatgat atcatctacc
     4921 cctaatgcct taaattcaca agctaattca ttatagcgag gcaaatgtgt tgatgaacaa
     4981 gtcggtgtaa atgctccggg taatgaaaac acaaccaccg ttttgttatt aaataactca
     5041 tcggttgtga catcaaccca agcatcgttt tgacgtgtac gaaatgttac actgggtact
     5101 ttctgacccg tcatatcttt aaaagacata ttaatgttct cctatagaat tatatattac
     5161 aaaaatctta ggcattatac tcacaaatat ggcataattc agcctatcag aacaatagga
     5221 aaaatttaaa ttggaggaat caagtgaata ttcgagattt agaatacctt attgcacttg
     5281 cagaacataa gcatttccgt cgtgcagcag aatcttgtaa tgttagccaa cctactttaa
     5341 gcgggcaaat tcgcaaatta gaaggcgaac taggcactat tctgcttgaa agaaccagtc
     5401 gcaaagtcct ctttacgcaa gcaggcttaa cattagttga acaagccaag gtagttttac
     5461 gtgaagtaaa aattctaaaa gaaatggcaa gcaaccaagg taaagagatg tctggcccgc
     5521 ttcatgttgg tgtaatccca accttggggc cttacatttc gccaattatt gtgcctgcat
     5581 taaaagcaga atttgcagat ttagagctgt atatttacga attacaaacc aaccaattat
     5641 tagatcaact tgaatccggc cagcttgatt gtggcattat ctcatttgta aaagagagtg
     5701 aatcttttat tgaagtgcct atctttaatg aagaaatgta cttggtagtt ccagaacaac
     5761 acgaatgggc agcgcttaaa aaattcgata tgaatttatt aaaaaaccgt gagttgctct
     5821 ttttagacag tggccattgt ttacgcacta atacgctaga ctattgtcta tccattggag
     5881 caaaagaaaa tccacacttt aaagctacca accttgaaac cttacgcaat atggtagcag
     5941 caaatgttgg cctagcattg attcctaaat tagccgctaa accgattaaa ggagtacatt
     6001 atattccact tgaaaacccg aaaccgtttc gagctgtggg aatggtgtat cgaccaggtt
     6061 caccattacg cgcccgctat gagcgtttag ctcaagccat tactaaaatt atgcaatccg
     6121 aggcgtaaaa atggcaaacg gtatgagtgt gcgcgcaatt cagaaagaaa aaacacgcag
     6181 agcattagta gaagccgcct ttaatcaatt aagctcagaa aaaaatttct ctaatctcag
     6241 tttgcgtgaa gttgcacgtg aagctggagt cgcaccgact tcgttttacc gccactttaa
     6301 agatatggac gaactaggct tagcaatggt ggacgaatcc gggctactat tacgccaatt
     6361 aatgaggcaa gctcgaaaac gaattgcaaa tggcggaagt gttgtcgtgg tttcagtgga
     6421 aacattcttc gaactgattg ccgaccgccc taacgttttc cagctattac tacgcgaaag
     6481 ctccggtaca tcgcaagcgt ttagaaccgc agcatcacgc gaaattcaac attttgtagc
     6541 tgaattggcg gactatatta tgagcaaaga taatcacagt aaccgagaac ttgcttatat
     6601 tcaatcggaa ggtttagtca cgctagtatt tactgccggt tctcatgctt tggatatgaa
     6661 caatcaagaa cgggaaaaac taaagcaacg tgtcattatg cagctaagaa tgctgattcg
     6721 tggctccacc tattatgcca ataaacaagc ttcatcaaca taaaaaaaca gacgcctaag
     6781 cgtctgtttt tattctttcg taatatatgc agtcgatagc tttaaccatt ctagtgctaa
     6841 ttgatgatgt tcagataacg cattccataa cgcatcttct gacaagatac tataattgcc
     6901 tttagtatct aactgttcat caaaactatc atgtaattca cgccattccg ggctagcata
     6961 aaaccgactt aagggttcca aaagtgcaga agctcgtttc cattgctcaa tccccttttc
     7021 caattctggt aatagctcta cccattggtt ataacaatcc tgcattttct gaatatctgc
     7081 ttttttcatt ctttaccgct tacaccataa attttagcct caatataaca taaaaatccc
     7141 cttccgaaga aggggatttc aactcaatta ggctaaatta ccactggtat ccaacgccta
     7201 caccgccacc aaagtcgcct cggctattcg cattaccttg taatttcaag ataagcttac
     7261 cgttatcact tgaacgtgaa taacctactg caagcgcgtt ttcaccttta aatgtaccac
     7321 ctgctgcagc caccatagat ttacctggaa tgtaaacctg cggtaacgct gctgctgcat
     7381 ttgaaccggc aataccagca cgggcttcac ggttattacg atggatcttg ttatttaagt
     7441 gattaacagc accttttaac tgaccaacat taacagcatc ggtatctgcc tcacctgctt
     7501 taacattagt aatacggtta ccaccattat ttaagccatc tttcgttaag cttaccgctt
     7561 ttcctgcaga gccattatta atggttacgc cattattgtt caccaatgta tcaccagtct
     7621 tgctagtaaa ttcaggggta tctgaaacgg ctacagttac atcagaacct ttacgtgtca
     7681 ctttgatatt attacctgca ttcacgctca ctgtactacc tgcttttact ttcgcagggg
     7741 ctttatcccc ttcaaccgca cctgtaccaa ctgctttaga atctacgttc cagcttacgt
     7801 tgtttacggc atttgctact gttgttgcat tcacaaagcg tgaaccggta ccgttaggat
     7861 cttgaacatt gattttgccg ttatcagcaa cggttaaatc tgtgatgttt acgttcactt
     7921 tcacctcacc agccttatca ctggtaatag ttgtaccatt accatttacg atattgatag
     7981 aaccatcttc atcagtacca atgttattac cattcacttt cgcatagttg ttcagctgtt
     8041 taccgttgat aacatctgtg cttactgggc taatatcgcc atctgctaca ttagtgatct
     8101 tagttggttt accgtcttta tcaccgactt tgatgttatc accatcatta gtgattttcg
     8161 gaccattctc actgaactgt acgctattga agctcacatc ttttgctgtc gcaaaagtaa
     8221 attgattacc atcacgttta acagttaagt tatcacctgc ttcaaacaca acttcttcgc
     8281 ccgttttcac tagcttagtc gcagcttggt caccggcagc cttattacct gcagatttaa
     8341 tattaaagcc tgcattattc actgcatctg caacagtttg agcaatcaat aacgcatttg
     8401 gctgagttgg tgctttcacc gtaccatctt cgttgttacc taactcactg gtatttgcag
     8461 tgatgttacc ttcattatct actttaatag tagtaccgtc agttttcgct tcaacgttat
     8521 aagtagttga accatcagca ttcgtgctag gtgtgatagt tacacctcgg ttaccgccca
     8581 ctttcgtagt agctgcatta gttgccgctt gtaaatcacc taagttcact acgttgttta
     8641 gcttgtcgcc ttcagcattt ttaatcgctt ctgcacggtc tttaccctct ggggttgagc
     8701 catcttcgtt acgaacacta cttgccacat tgcctaattg aacaggggct tcacctgtga
     8761 atttagccgt attgcttggc gttgagctat cagtaggatc ttggtttaca aactcaatcg
     8821 ggctatctac tttaatcgta ttcttaccgt ctttgttttc aaccgtgacc gttgtacctt
     8881 taccgttaat aaaatcaacc gtgtcattat gtaccacagt atcaaccgct ttgccgttac
     8941 cttgtaaatt ccagcctgca tttaatacat cacctaatgt tgctgcatta cttaacttat
     9001 cagctaagtt ggttggatta ttgtctgctg gttgaacctt atcatctgca gtcacaggta
     9061 tcagattaga cgcaacattg ctaatcgctt tattacctgc attgatacca tctttattga
     9121 tagtaattgg attatttgca ggatctgctt catcagttgg tacagttaca gtgttagagg
     9181 ttacgctgct aaacttaaca tcatctttag tcgcataaat gactttacca tcagcttctt
     9241 gcttcacagt taagttttta cctgcaacca tttcaactgc tttacccgga ttaatcagtt
     9301 catcaccacc tgaaagcttc tctccacctt ctacagccga cgttttcaac gtaaagcctg
     9361 agttattgat ggcgttggta atatcacctg ctgtcactaa tttcttagca tcatcagcgg
     9421 ttggttcatc aattctaccg tcattatttg catcatttaa tgccgtagtg ttagccttga
     9481 tcgcaccggt tgtaggatct tttacaattg ttacatcgtc cgtattcaca gaaagatcga
     9541 acacattcgc gccatcagca ttttttgtcg tgttaaccgt aactgattta tcagtcgact
     9601 tcacttcttc acgagatgcc atagcgaaag tataaagctg actaccattt actgcatctt
     9661 tactatctgc atttacgtca ccggcagcta cattagttac tttgactgca ttaccgtctt
     9721 tgtcaccaac attgatatta ccaccattgt tagtaatctt aggaccttca tttccgaact
     9781 gtacactatc aaaattcaca ttttttgcag ttgaaacagt aatgttattc ccatcacggg
     9841 taatctcaat gtttttacca tttaagaact gaaccgtatc acctgttttc accaggctct
     9901 tctcgtcacc gtttgcttta atgttaaaac ctgcattgtt aattgcatct gcaacggttt
     9961 tagctgttac taatgcattt ggttctgtag gctcttccac tttaccatca gggttatttg
    10021 ttaactcgct ggtgtttgcc gtgatttcgc ccttatcgtt taccttaatg gttgtaccat
    10081 ccgtttttgc ttcaacggta taagtggttg agccgtcatc gttagtttta gatgttacag
    10141 taacaccttt atcaccttcc actttggtgg ttgctgcttt cattgctgct tgtacatcac
    10201 ccacattcac agcattattc aacgtatcac ctgttgcgtt gttaatatta tccgcaatcg
    10261 ctttacgctc tgcatctgtt ggtgctgctt tatctgcaaa tgtaccaccc acgccgctct
    10321 tcagattagt gattgagcct gttgtatctg gtttaccatt gctcatatca atgctgttga
    10381 atgcaacatt atctttcgtt gtgtaagtga atttaccgtc agcttgggta agtgtcatat
    10441 ttttacccgc atcaaaggta actgtttcac ttggcttgat tagctgtgtt ttcttacctt
    10501 tggtttcacc accatcaaca ccatcacctg ctgttacatt aaagcctgaa ttattgattg
    10561 cattagcaat atcacctgcc gtcactaatt tcttagcatc gtcacctgta ggctcagtaa
    10621 ctttaccttc aggagaatta tttaatgttg tggtattcgc tttaacttcg cctgttgtcg
    10681 gatctttcac gatagtaacg ttgtcagtat tcactgtcat attaccgtca ttatcacgac
    10741 cgatagattt atccgttgca acatctaccg tatattcagt attgccttta tcatcttcct
    10801 ttccggcttt aacagttacg gctttagaac cagctactac agatgaggtt ttctctgaat
    10861 tattaattgc atcagccaca ttaccacgag ttactgtagg agcacctgct ttcgctacat
    10921 ctaccgtata gattgtttga ccattatcac ctgtttcagg tgcaccaaca gttgctaaac
    10981 ctgaaccttt cacttcggtt ttgtgacgct gctgcttgtt ttaactgact tacattcacc
    11041 gcatcagtat cagcttcacc tgctttcacg cctgtaattt tggttggatt accatcatta
    11101 cctgcaatat taacattacc atctttattc gtgattttcg ggccattatc accaaatgtt
    11161 acgctatcaa atttcacatc tttcgctgtt tcgtacgtga atatagtgcc aacacgttta
    11221 acttttaagt tatcgcctgc tgcaaaaatc actttttcgc ccggattaat caactctgct
    11281 gcttcttgat caccatcagc tttattgcca ccagattttg cattccaacc tgctttttga
    11341 atcgcttcag aaactgtttt tgtagttgca actttatctt cttctgcagg tgtagttact
    11401 gcacctgttg tgttatcaac cgtgatagaa ccggtatcca catcaaaggt tactttacgc
    11461 catcagcttc ttgtgtaaca tttgaaactg tacctttacc gtttacaaat tgtacagatt
    11521 catttggggt cactgtgcct ttggtttcac ccgcattatc tttaatattg aaaccttggt
    11581 ttacatagtt atttaagttc gtaattgcat cgccaacgtt tgttgcagta ttaccatact
    11641 gagttccagc tgcattcgtt acattatatt taggctgagt cacagagcca tccggattca
    11701 caacagaacc gccaccaaaa ttatttgcag ttgaatttgc aaggttactg gttgcattca
    11761 ttgccatata aagttgtgaa ccattaatcg catcggttga tgtagcagaa atctgacccg
    11821 ctgccacatt ttggatttga cgctctttac ctgcagagcc tacagaaaca acatagttag
    11881 tatctttatt taccccggca aagccattat aagtaatacc ccctaccgtt gcattttcag
    11941 ttggtgttgc tgcccttacg actgattcgc tacccaaagc aacagaacta ttcagagtag
    12001 cttgagctcc catacctaat gctgtagcaa attgagctgt tgcattagca cgtgtaccaa
    12061 cagccactgc tgattgtgct gaggcaattg aatttgcacc tacggctaaa gaggcatttg
    12121 cactcgcatt tgctgcaaca ccaaaggcag aagctttttc agccgttgca ttagcattag
    12181 aacctaccgc tgtagcatca cctgctgtcg catttgtttg gcgaccaagt gcggttgtac
    12241 cattagccgt tgcatttgct gaatgaccaa ctgccgtagc ttgaatacct tttgaaaccg
    12301 tagcaacacc taaagataac gctccgttac catttgcatt tgagtttgtg cctaatgcta
    12361 ctgccgcttg ctctccacct gttgccgttg cattcgggcc gatcgcaatt gagtttctgc
    12421 tcttcgcgcc atcattagct tgattctcag gtacggttga attcacagag aaatattgaa
    12481 tttggcttgc ttgcgcagga atattgacag aaagatcata aataaccgtg ccatttgcat
    12541 ttctctctgt actttttaca gttactgtac catcgtttga aacaacagta gcttgggtat
    12601 ctttcgtaaa gtcatcaatg gctttcttag ttaaaccaat ttcatagtta gttgtattcg
    12661 cagcagttgc agctttacct gttacagtaa tgtaatcagg gctagaagaa tttgccgtgg
    12721 tgttatacgc atttactgta taaatagttt gcccatttgc accggttgca tttgtaatat
    12781 taacattgct acctgcaaca acttctgttt ttaccgcttt taatgcttct tcaatcgtat
    12841 ttttatttgt tccaccaata ttagtatagg taacagaacc atcaggcttt actgtagcat
    12901 taccacctaa aatattttta gttgaattag caaggttacc tgttgcgttc attgccatat
    12961 aaagctgtga actattaatt gcatcggttg atgtagcaga aatctgaccc gctgccacat
    13021 tttggatttg gcgtttgatc gtgtttgagc caacagaaac aacattccct gctgccgtag
    13081 tattagccgc aaagccggaa taagtaatac catttaccgt cgcagaagga actgccacag
    13141 cgttggaaac ggttgaatta ctccctaaag caaccgaatt atttagcgct acattagcac
    13201 ctgagcctaa ggcaatagca aaaccggcac ttgctttagc actatcacca attgcaaccg
    13261 tagattggtt ggaagatact gcacttaccc ctaaagctgt cgcattaaca cctgaaactg
    13321 tcgcattata accaatcgct gtacctctag ttgcagtaga agttgcatta gcattagcac
    13381 ttgaacctaa agctaaagaa taagtagcat ttgcaacaga cttatccccc attgcacctg
    13441 aacccattgc aaatgaacga gtgccactag cggcagatct ccatcccatt actgttgaac
    13501 ggttaccagt agctagagct cctgcaccaa aagctgttgc acggttacct gttgcagcag
    13561 tatccgtacc taatgcaata gcatttgctg aagtcgctct agcccccata ccaatagcaa
    13621 tagaaggaac taatgcccaa ttctgaccag tgttattgag actctctaca ccaatattat
    13681 agtaatgtaa gaagtatctt ctggatccac taaatttgtt ctatgcgttg cattcgtatc
    13741 tgtaccaatt gcaatagtag atctgccagt tgagattgaa tccgcaccaa tagcaattgc
    13801 gttctccgat gatgcagttg cttgtgttga aatataatta cttgttgttg aacctataag
    13861 atacaacagc cacagcatca ttagctccca acacggcact agctccagcc aataaagcca
    13921 atgttgcctt acttgcagaa ctaacagatt tcgttttacc tttcgctcgt tgtaattcag
    13981 atactgcaac ccaactttgt gttgcctgat tccaaataac tttaaaaatt tgattcataa
    14041 tcgaccctat ataaaaataa aaaagattac gtagaaccta tgttcaacat aatcttcacc
    14101 aatataaaaa accgccacct atttaagtga aataacttac ttatagactc agaaatttaa
    14161 gtgcgcgtat tttacgctat ttgtaatata attcatcttc tggagtgtaa atttattgta
    14221 aataatacga ggaatctaac cgcttgttat aacgcaaaac accttgactt aaatcaagcc
    14281 actacctcat tttgagggga gatttatacg cagtgaaatt ttaaaataag ctaaggttta
    14341 cggataatcg ttcaacacta ttgaattatc actgtagtta tcgttaaaaa ggtatgcttt
    14401 tatgaaccaa ttcttccctc taatctttag cttaactcta ttttccggcg taactttggc
    14461 actagaaaaa gcacctcgaa ctatgccgac agaaggaata aataagcccc tacttggaca
    14521 aattctattc tttgacaata tgctgtcaca caacggttca caaaactgct ccagctgcca
    14581 taatccggat tatgccttta ttgataaccg cactactccg gcaaaagggg tggtttcaca
    14641 aggagatact ccaaccaaat tcggcaaacg caactccccg accatgcttt atgcgaaata
    14701 ctcgcctgag ttccactttg atgagcaaag tcaagaatat atcggcgggc agttctggga
    14761 cggacgagcc aaaaatctcg ccgagcaagc cggtatgccg cctatcgacc caaatgaaat
    14821 gggaatgcct aacaaattag aagtagccaa aagattatat aatgtgccga tgtatcagcg
    14881 atttttaggg caattttacg gtgaaaaggt atgggaaagt tatgaaagcg tttatgcggc
    14941 aatggaagat gcgattgcga cattccaaca agaaaacaaa cttctcgctc catttgattc
    15001 aaaatatgat ctatttttaa aaggcgaggt acaattaact gcattggaag aaaaaggcag
    15061 agctttattt ttcaataaag ctcaaactaa ttgtagtagt tgccaccaat tacagagtgc
    15121 tgcaaaccac caagaagaaa cctttagcaa ctatcactat tacaatgtag gcgtacccgg
    15181 taacccagac ttgatagcgg ttaacggctt cgcaccagac ttcgtcgatt taggcttatt
    15241 tgaaaaccca aatgttaaag gtgatgaaac acaaaaaggc aaattcaaaa ccccaacatt
    15301 gcgtaatgtt gccgtgactg cactttatat gcacaacggt gtgtttaaag aattaaagac
    15361 tgttttgctg tttttagaca gctacaataa cccggagcga aaaatcaacc ctgaaaccgg
    15421 cacggcgtgg caacaagcag aatttgaacc cactatcgcc caccaaaaac tcaaagccaa
    15481 acccttaagc gatgaagaaa ttgatgccct cgaagcattt ttaaaaacct tgacggatga
    15541 gcggtataga aaataaggct acaagcggta aaattttggg gaaattttac cgcttgcgtt
    15601 taactaccgt gttagctcac tttctaactt ttccaatgcc tgcaaatctt cccaatctgc
    15661 ctctttctgt tttaaacatt tacgctgaat atcaaatttt tcgtattgct ctctgacaaa
    15721 gctttccatt tgtttatgcg tgattgttcc accatttcct aatacagaaa agccgttaaa
    15781 ctcaatcaac atatctacat ttcttcgcca gaaacctaac gtaagatctt ggttgttctt
    15841 cacacgtaat tcggcacttt caagaaagat cattaccaag cgatttaaag aatccagctc
    15901 attattatct aaatagtttt tcgcaatcac aatatcgcct ttacgcacga cttttccttt
    15961 ccagctagtt aatcccatat tcatcttagt cgcatcagca cgttgacaaa tcaactcagc
    16021 ggcagtgtgt ttggttattg cataaatgag cttattttgc gtttctgcaa aaaacatttg
    16081 cgtattttta tctgttttgt cgtaatcgct agagagtttg aaaagctctc gtactttttg
    16141 atagaaacgc aattcacttg cccgaatctc acgaatctgt tcaagtaatt catcgaaata
    16201 atctaaacga ccctgcggat ttttcaaacg ctcgctatca attaaaaaac ctttttcgag
    16261 ataagtgcgt aatgtgctgt ttgcccattt tctaaactgt actgctcttg ggctacgaac
    16321 tcgaaaccct atcgccagaa tcatttcaag tgaataatgt tttacttgat aattcttgcc
    16381 atcttgagca gttatcaagt aatccttgat aactgaattc tcatctaact ctttgtcttt
    16441 taagatattt ttaatgtgtt cggatatatt ttgcacagag gtgtcaaaaa gttctgcaag
    16501 ttgattttgt gtcagccaag cttcattttc aaccactaac aaggctacat tgcttttgcc
    16561 gtcttccgta ttataaataa ttaaatcgtt catattttat tctgtttatt ggtagagata
    16621 ttagtcgcta ttttcaataa aacatgtata aatatccaga attgattttg aatttttcga
    16681 tgcagatcac aaaaatagag agttatacaa acaagcggta aaattttgta aaaaatttac
    16741 cgcttgtaaa ggttacttat cagctaattt ggcaagtagt ttttgatgaa taccgccaaa
    16801 ggctccgttg ctcatcacta agatgtgatc ggtgggtttg gcttctttga cgactagatc
    16861 gactaaatca tcaatatttg ccgaccaata cgccggttgc gataacacat tggtaatctc
    16921 gctcacactc cacgcaataa tatcaggctg gtaaacaaac actgcttcgg catcgtgtag
    16981 gcttggggct atttcatctt tatggacacc cattttcatt gtatttgaac gaggctctaa
    17041 cactgccaaa atgcgttgat ttttgccgac tttaccacgc agagcatcaa tagtcgcttc
    17101 tatcgcagtt gggtggtgag cgaaatcatc ataaacggta atgccgttta cctcgccttt
    17161 cacttccaaa cggcggttag cattcacaaa cttgcctaat gcctcgcaag ccccttgcac
    17221 ttcaacccct gcgtgatgag cggcggcaat cgccatcaga gcattatgca tattgtgctt
    17281 gccgataatc gaccaatgca cctcgccttg tttaacgcct aagtgaaaca cctcaaactg
    17341 tgagcaatcg gcatttaacg gtttagcaaa ccattcgttc tgttcgccaa taaattgaag
    17401 ctggctgtaa ctgcccattt ttagtgtatc ttgcacgttt tgatcagcga ttgccgacaa
    17461 aatacagcca ctttgtggca tcgtgcgaac aaggtggtgg aactggcgtt gaatcgcttt
    17521 taaatcatca aaaatatcgg cgtggtcaaa ttccatatta ttgataatca gcgttttcgg
    17581 ggtgtaatgc acaaatttag aacgcttatc aaagaacgca gaatcgtact cgtccgcctc
    17641 aatcacgaag aatggactgt taccggcacg agccgaaatg ccgaaattac cggcaacacc
    17701 gccaattaaa aagccggtat caatcccatt ttggtctaaa atccacgcta acattcctgt
    17761 tgtggtagtt ttgccgtgcg tgccggaaac cgccagcacc catttgtctt taagcaaatg
    17821 atcgtgcaac cattgcgggc cggaggtgta attgagttgg ttgtccaaca catattccac
    17881 gcacggatta ccacggctca tcgcattacc aatcaccact aaatcaggag ccggttgcag
    17941 ttgagcaaca tcgtaattcg ggataatttc aataccgtga gcagctaaaa aggtactcat
    18001 cggtgggtaa acattagtgt ctgagccggt cactttatag ccaagctcac gggcaatcat
    18061 tgccacaccg cccataaagg tgccgcaaat gcctaaaata tggatatgtt ttttcatctt
    18121 tttatattta aaatgttaga atcatcccct ctccccttgt gggagaggga tagatttttt
    18181 cttcgtgcag aagaaaaaat cagggagagg ggtaagcggt catttttagg cttaatattg
    18241 taagctccct ctctctgaaa aatatttctg aacgaaatat ttttcggtct caatactcgc
    18301 tacgctcgct cctgtggagc cgttggcaaa gccaacgttc aaatgtaaac atttgtccca
    18361 caaggggaga ggtgcgcttt agatgaggcg taccatccct cgttcacatc aattaatcaa
    18421 tattcttcaa ctcttcttcc gaaagctgct cttgttggct ttgctcaaca ttgccatctt
    18481 tcactttaaa ttcaaggttt tggaaataag cttcacggaa ggtaacataa gggtcttgag
    18541 cttgctctaa caacgcatct tgttctaata atttagaacg ggtatctacc ccttgtacca
    18601 caaatttagc gatagaccaa ggtgacccaa cataagtcag caccgaataa ccggtttcca
    18661 ccgcactacc aataccttga cgaggtgtgg ttgctccata agccggcatc ataatatagg
    18721 agccggaagg cacgccgtga gcgcctaaac tctcacctaa accacgttgt ccgttattta
    18781 aacgtaaccc ctcatctaaa ctcgcccagt caattaaccc acctaaacca aacacagtgt
    18841 tgatccagaa gcggttgaag tgaaccatcg cttttttacc ttctccttca attaagcggt
    18901 ttacaaagct caccggctca tcaaggttat tagcaacatt aattaagcct gttttaaccg
    18961 ggcttggtac atactctttc caacctttag ctaccggttt taacacataa gggtctaaat
    19021 agtcgtaatt gactttccac atcgcacggt taaacccctc aagtgggtcg tctcgcacgc
    19081 cggtttctgg gttaatgctt gatgaacaag cggttaaaaa tgccacactg agtagcataa
    19141 acatcggttt gaacgacttg agtttcataa attgaacctt ttgcagagaa atttgtccat
    19201 tgtagcgaag ttgataaaaa atacaaaaca aaaagccgtt ttgcctctag aaatctagac
    19261 gtctagattg agatatagtt cgcttttgat tacaatacag gcaacattta aggagcaaac
    19321 aaatggcaga ctggaacggc gaatatatta gcccttatgc cgaacacggc aaaaaaagtg
    19381 aacaagtcaa aaaagtgacg gtatccattc caattaaagt attggaaatt ttaactaatg
    19441 agcgaacccg tcgccaaatc aaaaatcttc gtcacgcaac caacagcgaa ttattgtgcg
    19501 aggctttttt gcacgccttt accggtcagc ctttgccgaa tgatgaagac ttgatgaaag
    19561 acagggcaga tgaaatccct gaagcggcaa aacaaaaaat gtgtgagctg ggaatagacc
    19621 cggacgaatg gcaatattag acacaccttg caactgcgag gttcttttta tgttttaagg
    19681 agactttatg tatcaacaat taacaacaga agcacgttgg gctgtgttgc ttacgctgat
    19741 ttatctgctc ggctgggtag gttttgctta cttttcaccg caaggcagag gcattttcgg
    19801 ctttccgatt tggtttgaac tttcttgcat tttcttaccc gtactattta gcttagttgc
    19861 caccattgtc gtcaaaaaag tgtataaaaa tatcgatctt gaggtgaata atgaatagtg
    19921 aaatgatttt acccctgatt gcttatttaa tttttgtgtt tggcgtagcg ttttatgctt
    19981 accgtaaacg ccaaggcgga agctttattt cggaatacta tatcggtggg cgttcaatgt
    20041 cgggctttgt gttagcaatg acaaccgccg ccacttatgt gggggcaagt tcctttatcg
    20101 gtgggccggg tgctgcctat aaatacggtt taggctgggt gttactggca atgattcaag
    20161 tgcccgcagt gctactctct cttggagcat taggcaaaaa atttgcctta cttgcccgca
    20221 agcataatag tgtcaccatt aacgatatgt tattagcccg ttaccaaaac aaatttgtgg
    20281 tttggattgc aggactagcc ttattacttt cgttttttgc gatgatgacg gtgcaattta
    20341 tcggtgccgg tcgcttactt gaaaccacac tcggaatccc ttaccaaaca gcggtaatga
    20401 tttttgccat cacagtcggg ctttatacct ttatcggcgg ttttagagcg gtggtgctaa
    20461 ccgatactat tcaaggttta gtaatgatag tcggcacaag cattttactc gctggtgtga
    20521 tttatgccac aggcggagtg gaaaatgcaa tgcacaccct tgaagccatt aacccacaac
    20581 ttaccacccc ttacggcatt gacgaacgcc cgcttgattt cacctttatg acttcatttt
    20641 gggtattggt ttgctttggt ttaatcggct taccgcatat tgcggtcaga agtatggcat
    20701 gcaaaaacag ccaagccttg caccgagcaa tgattatcgg cacggtagtc attgcaattc
    20761 taatgtttgg aatgcacctt tcaggcgtat taggcagagc ggttgtgcct gatctcaaag
    20821 tgccggatca agtcattcca acactaatgg tacaagtgct accaccggtg gttgccggta
    20881 ttttccttgc cgccccaatg gcagcgatta tgtcttcgat tgactcaatg ttgattcagt
    20941 cgtcttcaac cttaattaaa gatctctatc tggcaattaa gccgaatgcc attaataacg
    21001 agaaaaaaat caaattgttc tccactatta ctactcttac ttttacggta ttactcgtgt
    21061 ttgccgccct aaccccgcct gagatgttaa tttggctgaa cctactctct ttaggtggtt
    21121 tagaagcgac tttcctatgg gtaattgtac tagggttgta ttgggaaaag gcaaatgcca
    21181 ccggtgctat ttactcaatg ctggcaggct taagttgtta tgtattaatg actaccttta
    21241 agattgctat ttttagcttc cacgccattg tgccttcact gctaattggt ttgattgctt
    21301 tcttaatcgg caaccgattt gctcctaagg tgtaaaataa aataggcata gtggtatgga
    21361 agttcactat gcctattttg caaaatttcc gctcaattca accgcttgta gttaataagt
    21421 ggcattattt tctggattat tctgcttagt cgccattcta agtaacgtat aacctaaaat
    21481 cgctgaaacc gcagagccga gtaaaatacc taatcgagct agagcggtaa tactttcccc
    21541 agcctcactt acatcaaagg caagacttgc taagaacatc gacattgtaa aaccgatacc
    21601 gcatagcacc gcaatggcaa aaatttgctt aaaattaacc ccttgcggca ggctggcaag
    21661 gcggaataat actgctaaat aactaaaacc gaatacacct aaggttttgc cgataattaa
    21721 gccgagcgca atacctaacg gcaatggtga tgagagttgc tccattccca tttctaataa
    21781 gtaaacgccg gcattagcga aggcgaagat cggtaaaatc atataagcac accaaggggc
    21841 aagaatatgt tctagctcct ctgccggtcg ttccccatgt ttacctttca gcggtacgca
    21901 gaagccgatg atcacgccgg caagggtagc gtgaacccct gattttaaaa cggaagtcca
    21961 tagcactaag cctactacca aataagcaca gagtgaggtc actttaaagc ggttaagtag
    22021 cactaagccg ataatcgcaa tcgcggcaat agttaaggct tgcacactga tttcttgcga
    22081 atagaaaatg gcgattacca caatcgctcc tagatcatca ataatcgcta atgccaacaa
    22141 aaatgccttt aaagccaatg gcacacgagt gcctaataac gccacaatgc ccaccgcaaa
    22201 ggcaatatca gttgccattg gaattgccca accattatga tattcagggt ggttttgatt
    22261 aatcgcccaa taaataatcg ctggaacaat cataccacct actgctgcta tcgcaggaaa
    22321 aatagctttc ttataacttg aaagcgaacc ttcaaacaac tcttttttta cttccagccc
    22381 caccaacgta aaaaacactg ccattaagcc atcgttaacc cagagtaata gcggtttatt
    22441 caaggcaaat tcaccaaact gtacactaac aatcgtttgt aaaaactcaa aatagaaatc
    22501 acttaaggag gtgttggcgc acacaattgc tgcaaaagca aaaaccagaa gcaatacgcc
    22561 tcctgaggct tcagatttta aaaattcttt taatttttcc acttaacttt ctcctattaa
    22621 tatttgttta ttgtattttc atttctatac attccatctt ttaccaaaaa ttttgcgaag
    22681 atcaaataga aaatttgata aactagaact aactcgcatt ttattgctcc atatgattag
    22741 aaattaacct aaaatattaa aattttgtta tgacacacga ttggctctat tgggcattag
    22801 cctctgcact ttttgcagca ttaaccgcca tttttgccaa agttggctta caaggcgtag
    22861 attctgattt cgccactttt attcgcacgg tagttattat tattgcactt attgcctttc
    22921 tcacttacag cggaaaatgg cagccgttag atagcttgag cagcaaaaac tggctgtttt
    22981 taatcttatc cggcttggca acaggattgt cttggtcggc gtatttcaaa gcattgcaaa
    23041 tgggtaatgc ttcccaagtc gctccaatcg ataaattcag cttggtgtta gttacccttt
    23101 ttgcagtaat tttcttaggc gaacgcccaa gcggacaaga ttggcttggc attggcttag
    23161 ttgctggtgg cgtactgtta cttgccttca agcggtgatt tttatgcaaa attttgcaaa
    23221 tattgaaatt gcgtttattc atcggaaagc acctctgccg agtgatttct cctaccctga
    23281 aatgcccggc ggtttaactg aaaaacaggt gcaaaaatgg caaagccgcc gagtcgcctt
    23341 ttttctgctg acggaattgt ttaaaaaaca ccatctggat ttagatttat tagctgatat
    23401 gcaacgctcc ccaagcggtc gcacttttgt cgattctgag caaattgact ttaacatcag
    23461 ccattcaggg gaatggatag cggtcatttt ttcgtattct tttgcaaaat tagcggtcgg
    23521 cattgatatt gaacacccac aaaaaatcag acgttaccac gatttaatct gccattacgg
    23581 aaacgctgaa gaacaaaatg ttttattagc caaccactcc cccattctaa gcaacctcgc
    23641 cgaacgcttt tatttgagct ggtgcttgcg agaggcgata ttgaaatcgc aaggggtggg
    23701 gattgtgaaa ctgtccgaag taaaacattt accgttagaa aaacagatct tttccgccca
    23761 ttgtccgaaa ggcaagctgc attttgtgag cgaactgccg ttctatttaa gctacttcta
    23821 tcaacaacct caaaatatgc tattatctga acctttgcta taccattggc aaaacgggca
    23881 gtttcagcct ataaagtgcc aatcacttgt ttatgatgtt aattaaggat aacgaatgcc
    23941 taaaaaatct ttagaagaac accattccag ttttggcaaa attgcttccg aaacctttca
    24001 gtggattatg aatattgcct tgctagtaac aggagcattg ctttcttact cgctgtttgc
    24061 tgaagcctat tcactctatg aactttcctt tagcgacagt gagaaattcc aaattgtaga
    24121 aaaaatagta attttctttc tctattttga gtttcttgcg ttgattgtga aatatttcaa
    24181 atcgaattat cactttccgt tacgctattt cctctatatc gggattactg ccatggtgcg
    24241 tttgattatt gtcgatcatt ctaatgcgtt gcatacacta ttattcgcac tctctatttt
    24301 ggtgatgatt atagcattat atattgtaca caccgatcgt ttacataaaa gctaggaact
    24361 aatatgaagc taacccaata tcagcacaat gatttacaga ttctaaaccg agaaaccgtc
    24421 tataaagggc attttgagct acaaaaaatc actttccgcc ataagctgtt ttccggtgaa
    24481 atgagcggtg aagtggtgcg tgaactctta attaaaggcg aagcggcggc tttaattgcc
    24541 tatgatccaa ccttagataa ggtagtatta attgagcaag tgcggattgg agcttacgat
    24601 gcaggacaga aaaaatcccc ttggttgctg gaattggttg ccggtatggt agataaaggc
    24661 aacgaagagc cggcagaagt ggcaatgcgt gaagccaaag aagaagccgg cttggaagtc
    24721 acaacagtgc aacacgcctt aagcgtatgg gacagtcccg gtggacaact ggaacgcttg
    24781 cacctgtttc tcggcttgat tgacagcacc caagtgaaat ccggcgaggt acacggctta
    24841 ctggaagaag aaaatgaaga cattttggtt cacgttgtaa gccgtgaaca ggcatatcaa
    24901 tgggtagaag acggcacaat tgacaatgtg attgcggtaa ttgggctaca atggttgcaa
//
LOCUS       DANLXO010000027        24947 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.027, whole genome shotgun sequence.
ACCESSION   DANLXO010000027 DANLXO010000000
VERSION     DANLXO010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24947
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.027"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..367)
                     /locus_tag="PXD69_000926"
     CDS             complement(<1..367)
                     /locus_tag="PXD69_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283142.1"
                     /translation="MGLFSRKRKNHTPKEAPETGRSKQIVNIVELLCEGEIEGLVDGF
                     KSIYLDGTKIQNDDDSYNFNNVSGQLNVGTQDQDVLDGYDSSQNEVNVGVEIKKKNGA
                     IVRTVTDERINRLRLTLGVR"
     gene            complement(370..960)
                     /locus_tag="PXD69_000927"
     CDS             complement(370..960)
                     /locus_tag="PXD69_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL6283143.1"
                     /translation="MITVKFYGHLRKFGTDFKLEVKDTAEAIRALCTQIRGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFQAVLGVALIGAA
                     FFLGPVGWGVLGASSAMMMGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETMTVEV"
     gene            complement(1229..1960)
                     /locus_tag="PXD69_000928"
     CDS             complement(1229..1960)
                     /locus_tag="PXD69_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6283144.1"
                     /translation="MELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKAN
                     YFEISDLDYIKAEEKGELVAVVHSHPEPNGKPILSVLDRKMQVQTGLDWWLVHNRQIH
                     KFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFDRQDDWWHTGQNLYLDNIQG
                     QGFERVGTPQIGDVILMQVGADVPNHAAIYIGEQMVIHHSPNRLSKRDLYDGYWLRHT
                     HSIWRHKLADKLDFDGILNDIAVNN"
     gene            complement(1964..2680)
                     /locus_tag="PXD69_000929"
     CDS             complement(1964..2680)
                     /locus_tag="PXD69_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL6283145.1"
                     /translation="MPVSISNQMKLDLAKLEQNAMLDLYEVDLRTLKDKSGNAGSVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKATSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSVNKLG"
     gene            complement(2680..3009)
                     /locus_tag="PXD69_000930"
     CDS             complement(2680..3009)
                     /locus_tag="PXD69_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283146.1"
                     /translation="METLQWCVRTDLAVENTPEIMEVKFGDGYTQRSPKGLNNLLRAY
                     TGTIKVKKGEHLAVEAFFAKHRGVSPFYFKDPYTQQNKKVVCSSWPAKMVGLNHWEFS
                     VTFKEVP"
     gene            complement(3009..6560)
                     /locus_tag="PXD69_000931"
     CDS             complement(3009..6560)
                     /locus_tag="PXD69_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6283147.1"
                     /translation="MSSSNRLTITLDVENSKLLAGFAQSDTVANKFARSFIVNMDQAQ
                     QKARQFADRSTKYLKNIEQAANNLNSSVSKERFWQIANRLQFPTSKVISYANSYTELG
                     NKLKLVTESESQHARAMAAVYDISLKTAQSTQATSSVYQTFAQNAKQLGISQNDVAKL
                     TETVAKSVAISGASSATASNALVQFSQSLLMGKLKAQEFNSLMTQTPSVIQAIAKGLG
                     ITTAELKAMVDNGEMSAEKMIEGLKKAESYVNGQYAKTTTTISGAMQNLSTAAEKWVG
                     EMDSTVGASQKAVAVLNALNAHFDTFAKTALVAGGAFVLFKGYMSVRPFIEARAAIYE
                     NRKAIIAENQARQQTIATRQQELVVLSQQTALKLEQTLQTYNQNKAELEAIAVKQQKI
                     TKEREEIAVAIQAAATRTERLALSAELQALDQKEIALGQQKIAVERQQIATKQALKVA
                     YAENAVAQSAMNAGMVTATTTTRAMNGVLAAARAELNLLKAAALSNPLMTLAMVATTA
                     GTALWGFFESQKAAREEALRYADSLDSVRANIEKMTKAQTDAEMVKLSRSIKEQETAL
                     ASLKQRQAELTREIEQGATVLDDAFGAGVRFEKSAKELAKAQEELKLVTADVEKAQNT
                     LNASLEAQEALQAHVPIANLREEFVKLYPHIDESQIKVDGLNIAIGNFTVKSPEMVIA
                     ANNIANALGGVAGEAMRAAILVANLSSMKLDANGAAIIDPKHLEKIEQIERNNAIASA
                     KGKDKIALQVKDALIKSGMKEGDAGYERLKAAYEQQFTLQNAPKRGGKPKKTKAERSA
                     ESYQNQVAEMTNRLSGLKIDKEDLVKYGGISQYQEVRKLTEDIALNAEKYKNYGTEGV
                     AKLKELAAKIDSEQQLLDIEQFQVDHDKKLEAMQFELDLLGKTRTEKELLQFNNQLDL
                     EAERLKINMTKENIALLDQKIAKIKEEYELHQKKQEETRASVMMGIKEGWNNIETDVS
                     NVAANVANITQNTFDGMADSLTNFVMTGKADFRSFANSILSDLSKMIIKMMLFNAIKQ
                     GATMLFGYQGPTTTVNGNAVYGLGTWATGGYTGNGGKYTPAGIVHKGEYVITKEATSR
                     LGLDYLNYLNYGRRGFASGGGVAVPRVPSSSYQPKSAQSSISVQVINNGEPVDAKVSQ
                     KQQGEQTQITVELMRKIARQEANGMIQNNFRAGGVFA"
     gene            complement(6614..6841)
                     /locus_tag="PXD69_000932"
     CDS             complement(6614..6841)
                     /locus_tag="PXD69_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283148.1"
                     /translation="MFEALDRFMINTIKIAIIVFLVACIFISMPNWWIASILVLFPTA
                     YLLDKYWWRNTEMYRRKMDKLVKEMKNNRQI"
     gene            complement(6904..7134)
                     /locus_tag="PXD69_000933"
     CDS             complement(6904..7134)
                     /locus_tag="PXD69_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL6283149.1"
                     /translation="MPERHFAEYRLFYQEQPFGLWRDDYRTAQLAHLTAMFNRDPKGK
                     APKLAEFMPFFNRTDEVEEIEDDGVADYLAKR"
     gene            complement(7179..7580)
                     /locus_tag="PXD69_000934"
     CDS             complement(7179..7580)
                     /locus_tag="PXD69_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283150.1"
                     /translation="MTLREKLLANKPKLQPIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGVLLFNPLDINDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            complement(7664..8305)
                     /locus_tag="PXD69_000935"
     CDS             complement(7664..8305)
                     /locus_tag="PXD69_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283151.1"
                     /translation="MAKTTKVQGTKFRISVGREAQKAITAINLNTATLTIASSGYKKG
                     DAIELTGCGQLDGIYPVLSVTTDQVKLCEEVNWTGKDLPANYTKAKAALVQYSEQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPTTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            complement(8333..8728)
                     /locus_tag="PXD69_000936"
     CDS             complement(8333..8728)
                     /locus_tag="PXD69_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283152.1"
                     /translation="MKIHTKIRKEVLELLQTKLPEIDNFYNGLPTFIDIEEEQLAVSV
                     YLDDISLQEITVCNNQWDAKLNITIHLKSTESAEDELDEWAEKIREIIDDYPEFEHLE
                     SVALSQYQYEQDQNQRTWHMATLIFDVEY"
     gene            complement(8725..9249)
                     /locus_tag="PXD69_000937"
     CDS             complement(8725..9249)
                     /locus_tag="PXD69_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283153.1"
                     /translation="MGSQVTGLKELQASLKKIARQTVPKAAAQAIRTVGRQAMNKAVK
                     SVAAEIGVNQKTIKGRAKMTAKPTPSRLQATIKVNRSHMPMIRVLERKSNRLSPTKGS
                     IRVGKHTVQRGFRQRLANGRTHIMYRQGRKRYGIDVAKVPLSQPLTQAFDRELKNYPE
                     QVQAELAKQIAGKL"
     gene            complement(9253..9555)
                     /locus_tag="PXD69_000938"
     CDS             complement(9253..9555)
                     /locus_tag="PXD69_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283154.1"
                     /translation="MSSPFEQAIAAADQTIQQTMMSEWLIGGKPYPATFDEAPAIFNG
                     LHSTDDRAIHGTERTLTLFRASGYKPRLDDRVSGNGKKYLVKSYHFVDQLIVLQLE"
     gene            complement(9548..9871)
                     /locus_tag="PXD69_000939"
     CDS             complement(9548..9871)
                     /locus_tag="PXD69_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2190 family protein"
                     /protein_id="HDL6283155.1"
                     /translation="MAKNYIQDGNTVRLTATKAITSGDVIVAEDLIAIAVSDAAKNDA
                     VVGLTTGVFSVKAKQADDIKQGAVLYWSETEGATLTAGSNKRLGIAWKDSGTSSNQVD
                     VKINV"
     gene            complement(9945..11906)
                     /locus_tag="PXD69_000940"
     CDS             complement(9945..11906)
                     /locus_tag="PXD69_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HDL6283156.1"
                     /translation="MKTWFNIQAKANDTAEISIFDEIGFWGVTAQQFAKDLKALGNNL
                     KQINLHIHSPGGDVFDGIAIYNLLKNHPANKTVYIDGLAASMASVIAMAGDEIIMPEN
                     AMMMIHKPWGIQGGDADDMRKYADLLDKVESTLIMAYVAKTGKYETDLAEMLKEETWL
                     TGKECVEQGFADKLAEPLVAMACIQSKKLEDYTKMPDKIKNMLFAPQGNAGANPKHEQ
                     PQTPPQAGENPQNVAKPDAMVALAQRNATIKATFAAFGTQFDGLLAECLADVSMTAEQ
                     AKDKLLAKLGENTTPSVPQNHIHAGNGNIVGDSVKQSLMARAGQDTDKTNARDNAYNA
                     MTLRELARASLVDRGVGIAGYTPMQMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAT
                     ENYEQFTTRGTLTDFRPAKRVGLGEFGYLPEVGEGEEYTYGTIGDEGASVALATYGQL
                     FSITRQAIINDDMHLLTKIPEKMGAAAKATITKLVFALITGNATAQDGKKLFDATHKN
                     SLTGAALNVENIDKAIQLMNGFVNSRGEPLSIEPEFMLLPTSLHTKAKQILGSSSVEG
                     ADINSGIINPIRDIVSPIKSPRLQIADPKSWYLLNKEAIEVSYLDGVDSPYIEQQHGF
                     TVDGVSTKVRIDAGVNVIDYRGVVKVTNA"
     gene            complement(11918..13417)
                     /locus_tag="PXD69_000941"
     CDS             complement(11918..13417)
                     /locus_tag="PXD69_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL6283157.1"
                     /translation="MNFLEKTIATLSPKWAANRSRNRYVLNAYEAAQPSRTHKASRES
                     KGANSTVRQSAVSLREQARALDQNHDIVIGILDKMEERVIGSKGIHIEPQPLTLAGEV
                     HEELAGQIRKLWAEWSVKPDVTGLYTRPLLERMLLRTWLRDGEVFVQLVKGKVAGLEH
                     GSQVAFSLEALEPDFVPMQSDEAKNGLVQGVFLNAWRKPTAYQVYLDNPQESNGMYGK
                     VKTVPADNMLHLAFRKRLHQIRGVSMLHGVIVRLADLKEYEESERVAARIAAAMTMYI
                     KKGDAALYDDDSNSDGERLFDIAPGAVIDDLKPGEDIGLINSNRPNVNLETFRNGQLR
                     ATAAGTRSSYSSIARDYNGTYSAQRQELVESFEGYAVLQDAFVAAISRPIYREWLKMA
                     IASQAIKLPPDIDQNSLFNAVYSGPVMPWIDPIKEANAWKERIKGGLATEGQAIRASG
                     NNPAEVKRQRIVEIKENQAEGLKFDTDLTNYGGQDKSFSNQKDEINEDE"
     gene            complement(13417..13641)
                     /locus_tag="PXD69_000942"
     CDS             complement(13417..13641)
                     /locus_tag="PXD69_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283158.1"
                     /translation="MSLYTIDELKQKIRTLDEKIETAQSQVSFNGRSVSYQVAELTKQ
                     RDRYQTMLDEQLAQSGQRTKQHRIKYARFI"
     gene            complement(13638..15749)
                     /locus_tag="PXD69_000943"
     CDS             complement(13638..15749)
                     /locus_tag="PXD69_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HDL6283159.1"
                     /translation="MFASAKEIRRDIANAIKAPRRMRVSEAVAEYMRVPLGGGNSVKW
                     DKHTAAYMLEPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYSIICDPSDFLLVQL
                     TQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLS
                     SSDYKYVALTDYDRWPEDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDLKHI
                     PKSTHEAPPTTGILSLYNRGDRRRFYWQCPDCSEYFEPSMANMVGYREDSDFVKASEN
                     ARLQCPHCQTLIAPELKRELNIKGVWLKEGQKIDASGQISGESRKSRIASFWLEGPAA
                     AYQTWAQLTYKLLNAEHEYEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERR
                     EEVEEKTVPAQCRFIVAAVDVQGGKNRRFVVQMVGYGENGERWLIDRYNISHTLPDSD
                     GVIEKIDPRIPDDWYILISDVLEKRYPLAHNPNHFMPILAMAVDSGGEDGVTDNAYQF
                     WRKCRRDGYAKRVYLVKGDSTKRQKLITKTYPDNTARSDRHSSARGDVPLYLLQTDYL
                     KDRINNALFRDTVGANYIHFPDWLGEWFFNELTYEERGADGKWRKPGKGNNEAFDLFC
                     YAHAIAILRGYERIKWGDENDVPSWAKLPDINPNIIRETPRTAEQAVEIEEKSEKPQP
                     KPTKAKSSWLSGGGRKTGGWL"
     gene            complement(15749..16225)
                     /locus_tag="PXD69_000944"
     CDS             complement(15749..16225)
                     /locus_tag="PXD69_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1441 family protein"
                     /protein_id="HDL6283160.1"
                     /translation="MDNLFDLKLNINQIAELTGLHRQTVSQRVAGLNPALGSNSKLKL
                     YALRDLILTGLAEKMSADVDSLSPADRRAWFQSENERLKFEKEIGELIPASEVALEMS
                     ALAKTVVQALETLPDILERDCGLQPKDLIRVQQVTDDVRDQMALHIQEVTTDTENE"
     gene            complement(16492..16725)
                     /locus_tag="PXD69_000945"
     CDS             complement(16492..16725)
                     /locus_tag="PXD69_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283161.1"
                     /translation="MVLLIALSGCTSKTIVSTEYLYPPAAYLVPCERTAFSGKTYGDT
                     VDYLIKVMGERDLCASQIDRIREWQAQTKQGFK"
     gene            complement(16691..17020)
                     /locus_tag="PXD69_000946"
     CDS             complement(16691..17020)
                     /locus_tag="PXD69_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL6283162.1"
                     /translation="MIKYIYLAATVMILGLCGWIWHQSKQIDGLRAENQTQAQTIEQQ
                     QKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNEITSILAQDSCAKADLPNGVA
                     DSIKRLH"
     gene            complement(17021..17614)
                     /locus_tag="PXD69_000947"
     CDS             complement(17021..17614)
                     /locus_tag="PXD69_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 19 protein"
                     /protein_id="HDL6283163.1"
                     /translation="MWISESKFKQVFPNAVSGIYSIIDKHIEKAGCKTKEQQAMFLAQ
                     CGVECAGYSVFEENLNYSATALLRTFPKYFSQHNVVLYARDKRAIANRVYANRMGNGN
                     EQSGDGWKYRGRGLIQITGKANYIEFAKWEGLPSLVTDPDQITKNLALTVQVAVWYWV
                     SRKLSEFSDILTVTKKINGGTHGLTQRTAYYKKLMAD"
     gene            complement(17604..17948)
                     /locus_tag="PXD69_000948"
     CDS             complement(17604..17948)
                     /locus_tag="PXD69_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin, lambda family"
                     /protein_id="HDL6283164.1"
                     /translation="MPEKNPDIYTQAWNYLVMFLSNHNGWICGVIIAFFTSITKSFLY
                     GKTDTPKRVLAEAILCSVIAGSMRPILIYLNADVSLITPIGAGIGLLGTSAIRQMILK
                     FLNKKAGGENVD"
     gene            18067..18645
                     /locus_tag="PXD69_000949"
     CDS             18067..18645
                     /locus_tag="PXD69_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283165.1"
                     /translation="MIEFDQIDDSFYHFPFRPRPGDTSSDTATPCIGGVDLVSNPEKV
                     ELIPEAAHSPMLKKLLTDLNTPNSKLLTLGCAYWAHKDNRDTSYAYLEFSFREHSVAT
                     NLEFIRSIDEQFEQFLQENKKQLSIEFSVPEQAFDIVSQALFWSIRPFSYFGSEERIL
                     IYFQAGSPRHQDLEIFLDLLHRFLTEYLVVPA"
     gene            complement(18660..18735)
                     /locus_tag="PXD69_000950"
     tRNA            complement(18660..18735)
                     /locus_tag="PXD69_000950"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18700..18702),aa:Trp,seq:cca)
     gene            19162..19356
                     /locus_tag="PXD69_000951"
     CDS             19162..19356
                     /locus_tag="PXD69_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283166.1"
                     /translation="MALSRTEIVNRSNAKRGIKLKAFKLHESTIAQIEQLAQQLNIPQ
                     NQLIKLAVEKLQEQTNFTTG"
     gene            complement(19324..19689)
                     /locus_tag="PXD69_000952"
     CDS             complement(19324..19689)
                     /locus_tag="PXD69_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283167.1"
                     /translation="MQIDVKGVLNLWGGYVRFTDCKGYPTMQAFMRESPQERTKQRYL
                     ARLDDDTLEKVDRQMRKLQANDKRQFDVLFYKYAVGLENKQVWQKLSLSKTSYHTELL
                     LAERFMEGALAGSEIRLLL"
     gene            complement(19679..20047)
                     /locus_tag="PXD69_000953"
     CDS             complement(19679..20047)
                     /locus_tag="PXD69_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDL6283168.1"
                     /translation="MSDWLEIALPYPPSVNHYWKHTRNGRHYISDKGKAFRAEVVKIC
                     KMFDPFKGAVQTVLQIYYPDKRKRDPDNLEKALWDALKIGGLIEEDDNQILVDKRTIT
                     AGFKKGGMVVLKIKAVGNAN"
     gene            complement(20044..20328)
                     /locus_tag="PXD69_000954"
     CDS             complement(20044..20328)
                     /locus_tag="PXD69_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005672808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HDL6283169.1"
                     /translation="MANLRKEAKGRECQVRLPGICNHNPETVVLAHYRMAGLNGVGMK
                     PDDIFGAWACSSCHDECDRRTRKLEADYVRQAHAEGVFRTQAILRREGKL"
     gene            complement(20705..20917)
                     /locus_tag="PXD69_000955"
     CDS             complement(20705..20917)
                     /locus_tag="PXD69_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283170.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLISLSILTLRYIGYLLIYPLAFFVA
                     VGSFIVIGQWKYQECLDDFKSDFNPI"
     gene            complement(20967..21419)
                     /locus_tag="PXD69_000956"
     CDS             complement(20967..21419)
                     /locus_tag="PXD69_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL6283171.1"
                     /translation="MAKYQMMKLPGGILSPLNDEEAERLKSFQNGEQYEIEIKRQRNP
                     AFHRKVFAFFNFCFDCWSGSHSDWEFQDPTAQFDTFRKHLTVMAGFYVQTWNLKGQVR
                     IEAKSLSYANMEQDEFEQAYKALINAAIKHVFNNTKDENTINQLYSFF"
     gene            complement(21538..22110)
                     /locus_tag="PXD69_000957"
     CDS             complement(21538..22110)
                     /locus_tag="PXD69_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6283172.1"
                     /translation="MTDFDKDTYQTPKYFRNWLNHRYAWFHIDGCSNGKNALYSYWIG
                     KAAEGLDEDTLSGQIAEDFLAENLLDVILERVADWGELLRIFVNPPYSNPLPFVQRAA
                     ELKKAGHIVVMLLPADKSTRWYQVIQENASEVIDIIGGRINFINPLTGEEVKGNNKGS
                     MVAVFDPFVEGIVTRQMPLDKIKELGGYEK"
     gene            complement(22107..22754)
                     /locus_tag="PXD69_000958"
     CDS             complement(22107..22754)
                     /locus_tag="PXD69_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL6283173.1"
                     /translation="MSLQKTEQNRPLAVLGEQQGKLSGEVESLVDRIFDQLLASCPSI
                     QYWSEKQVATAKKQWILGFAENGIRTVEQVRQGMKALRAKTDDFVPSIGKFIQWCNTI
                     DYHELGLPDLEQLLKLLDRSLRFDFIEIQKLKFKSNAEYWLITDLYARNKKYSWKDET
                     LRNQAEKALVAMAKRIMSGEQIPPPKPLIEEKKKVPIDPRIQRILDEKKQAGAMQ"
     gene            complement(22754..23038)
                     /locus_tag="PXD69_000959"
     CDS             complement(22754..23038)
                     /locus_tag="PXD69_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283174.1"
                     /translation="MLLEQFGITGKLAEDFIVHRKAKKAPITETALNGYQREADKAKI
                     PIQKAVEIAIERGWTGFKADWQWQDDQPKHRPKDNMRAEWNNPEAWAEVF"
     gene            complement(23176..23527)
                     /locus_tag="PXD69_000960"
                     /pseudo
     CDS             complement(23176..23527)
                     /locus_tag="PXD69_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596652.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(23524..23766)
                     /locus_tag="PXD69_000961"
     CDS             complement(23524..23766)
                     /locus_tag="PXD69_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6283175.1"
                     /translation="MYGINLNLNEKSSQTQNARILAHLQNGGRITSLSALDDFGCLRL
                     SARIKDLRDRGHDIQSVFITVPNGKKVKQYFMECAK"
     gene            complement(23923..24156)
                     /locus_tag="PXD69_000962"
     CDS             complement(23923..24156)
                     /locus_tag="PXD69_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL6283176.1"
                     /translation="MEELKAYLNSLTTKEQESFALRCNTTVGYLRKSISRNSRLGAEI
                     CVAIERETKGLVTRKHLIEDWHLRWPELANDKQ"
     gene            24285..>24947
                     /locus_tag="PXD69_000963"
     CDS             24285..>24947
                     /locus_tag="PXD69_000963"
                     /inference="COORDINATES: protein motif:HMM:NF012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6283177.1"
                     /translation="MNELRLLRQKKLKRLIDEVSEGNIADFARKIGKEPSYVARMLYP
                     SDKAGAKPIGEKMALHICHKFVLPLDWFNRDDDGEFIQINNGEEDNIILSVLNIQASA
                     GIGAKNGDVMEVIREIKFNPEQFYNLFRGITPEHIELISVKGDSMEPTFSHGDLLFVD
                     VTIQEYDGDGVYVFTCDDYIFVKRIQKTGRHFTILSDNDRYKPWQLDQEIYIHGKVKV
                     HQS"
BASE COUNT         6459 a         5774 c         4962 g         7752 t
ORIGIN      
        1 accttactcc caacgttaaa cgcaagcggt taattcgttc atcagttacg gtgcggacaa
       61 tagccccatt ctttttctta atctcaacac ccacattcac ttcattctgt gagctatcgt
      121 aaccgtccaa cacatcttga tcttgcgtac cgacatttaa ctgaccgctc acattattaa
      181 aattatagct gtcgtcatcg ttttggattt tcgtgccgtc aagataaatc gatttaaagc
      241 catctaccaa gccttcaatt tcaccctcgc agagtaactc cacgatattc acaatctgtt
      301 tagagcgacc agtttccggt gcttctttag gagtatgatt ttttctctta cgactaaata
      361 atcccataat tatacctcta cagtcatcgt ctcaactccc tgtgaaatca caagcgagcc
      421 ggtccgaatt aagccataag ccaacggcac aggtttgcct tgagccacca agttatttaa
      481 atttgaaaaa gccgttgagc tttctttttc tgtttcatta cccattgtgg gggcttttgg
      541 cattttggtg agcatttggg aaactcctcc tagtaacatt gatgccccca ttgctcccat
      601 catcattgcg gaagaagccc ctagaactcc ccaaccgacc ggcccgagaa aaaatgcggc
      661 tccaattaag gctacaccta acacagcttg gaaaacaccc ccgcttttcg cccctttgat
      721 aacaggggta aaatgaatgg tttgcccttt cttcaagcaa taaaaaagcc ctttttcaag
      781 ggctgatggg tctaaatatt gcttaccgat acggacttta taaacaccgt ctcgcaatgc
      841 ctcacgcaat cctctaatct gtgtacataa ggcacgaatt gcctcagcgg tgtcttttac
      901 ctcaagctta aagtctgtac caaattttct taagtgtccg taaaatttaa ctgtaatcat
      961 agttaccacc aacgaatagc agtgataaat tcaggggctt tccagatgaa cgcaaacaaa
     1021 aagagaatta ttgcggctgt ccacattgtt tttctgattt cttttggggt aatattaatt
     1081 gcttccataa gaactcctag aaatttgaat gtaaatcgtt tatcattcat ttaatttatg
     1141 tcctcttagt taggtaagtg gatatgaaaa accccgaagt gctgcaaacg cttcggggtt
     1201 tgtttttgtt acaagcggtc attttttgtt agttatttac agcaatatca ttcaatatgc
     1261 cgtcaaaatc taacttatcc gccagtttat gccgccaaat gctgtgggta tgacgtaacc
     1321 aatagccgtc gtataaatca cgcttagata atcggttcgg gctatgatgg attaccatct
     1381 gttcgccaat gtaaatggca gcgtggttcg gcacatcagc acctacttgc attaaaatca
     1441 catcgccgat ttgtggggtt cccactcgct caaaaccttg cccttggata ttatccaaat
     1501 aaagattttg cccggtatgc caccagtcat cttgtcgatc gaattcgtcc atctcgtaac
     1561 cggcaagcat ataggcatca cggtagagcg tgtaacaatc cattgtgccg tgtttaaact
     1621 cacgcccgat taaatgtggt acattgcgga atttatggat ttgccgatta tgcactagcc
     1681 accaatctaa accggtctgt acctgcattt tgcgatcaag cacagataat ataggcttgc
     1741 cgtttggctc gggatgtgaa tgtaccaccg ctaccagttc gcctttttct tctgctttga
     1801 tgtaatcaag atcggatatt tcaaagtaat tggctttgtc ttccgcttgg ttttcgcaag
     1861 ggataaatcg atttttattg ccgtcaaaaa caacaaagcc gcacatttcg tgcggttcgt
     1921 gttggagggc gtagtcgatt atttgttgtt ccaattccat tcattacccc aatttattca
     1981 ccgatacaaa tccaccaaaa ttacgctgat tgcctcgcaa ttcacaaccg ttcaggcaat
     2041 ggctgcattt atcggctttt gggtctgatg ttgccttgtc tttttcatca aaatattgct
     2101 taccggtata accacattcc gccgagcggt aaatccaagt gcaggtgtcc gccataataa
     2161 ttctgctggg gattttggca ttatcagttt caatcggtaa tgccagcgta aaggtcgccg
     2221 tttctcgggt gaggctggta agctgctcaa tcacaaaatg actgattatt tcctgatttg
     2281 gatcagcttt cgcattaccc ccggcaaaat tcacggcatc taaatattgg gcgtaaacct
     2341 gatgacggcg aacaatcgcc ccgatacact catcaaactg attagcaata cccgtaacta
     2401 agccaaacag atttgatagc gtaagagtag ggcgattgct tgggccgcta ctgtttcgtt
     2461 caaatccact tgcctcaatc gggtacggat cgtaagtccg cccttgccag acaatacttg
     2521 ttttgagttc atttaacccc gaataaaagc ggtaaactga gccagcatta ccgcttttat
     2581 cctttaatgt gcgtaaatct acctcgtaca aatcaagcat tgcattttgc tcaagtttgg
     2641 caaggtcgag tttcatttga ttggatatgc taacaggcat tagggtactt ccttaaaggt
     2701 tacactaaat tcccaatggt ttaagccaac catttttgcg ggccaactgc tacacactac
     2761 ctttttgttt tgttgtgtgt acggatcttt aaagtaaaaa ggggaaacac cacgatgttt
     2821 ggcaaaaaat gcctccaccg ctaaatgttc cccctttttc actttgattg tgcctgtata
     2881 ggctcgtaat aaattgttta agcctttggg cgagcgttgg gtataaccat cgccgaattt
     2941 gacttccatt atttcagggg tattttcaac cgctaaatcg gtgcgaacac accattgtaa
     3001 tgtttccatt aggcaaatac tcctccggct ctaaagttgt tctgaatcat tccgttcgct
     3061 tcctgacggg caattttacg cattaactca acagtaattt gcgtttgctc gccttgctgt
     3121 ttttggctga ctttggcatc taccggctca ccattattga tgacctgtac gctgatacta
     3181 ctttgagccg atttcggctg ataagatgat gacggtactc ttggtacagc gacaccaccg
     3241 ccagaggcaa aaccacgtct gccatagtta agataattca aataatccaa accaagacga
     3301 gaggttgcct ctttggtgat gacgtattcc cctttgtgga cgatacccgc tggggtgtat
     3361 ttgccgccat tgcctgtgta gccacctgtt gcccaagtac ctaatccata aacagcatta
     3421 ccatttaccg ttgtagtcgg tccttggtag ccaaacaaca tagttgcacc ttgtttgata
     3481 gcattaaata acatcatttt gataatcatt ttgctaagat cagataatat ggaattagca
     3541 aaactacgaa aatccgcttt acccgtcatc acaaaattag tcaagctatc cgccataccg
     3601 tcaaaggtat tttgagtaat attggcaaca tttgccgcca cattgctgac atcggtttca
     3661 atattgttcc agccttcttt tattcccatc attacagaag cacgagtttc ttcctgcttt
     3721 ttctgatgta gctcgtattc ttccttaatt ttggcaattt tctgatctaa aagagcaata
     3781 ttctctttcg tcatattaat tttcagccgc tcggcctcta aatctaattg attgttaaat
     3841 tgtaacaatt ctttttcagt acgagttttt cccagtaaat ccagctcgaa ttgcattgcc
     3901 tctagctttt tatcgtgatc gacttggaat tgctcaatgt ctaaaagctg ttgttcagaa
     3961 tcaattttag cagccagctc tttgagttta gccacgcctt cagtgccgta gtttttatat
     4021 ttttcagcat tcagagcaat atcttcagta agtttacgca cttcctgata ttgagaaatg
     4081 ccaccatatt ttacgagatc ttctttatct atctttaagc cggataaacg attggtcatc
     4141 tccgctactt ggttttggta actttcggca gagcgttcgg ctttggtttt cttcggtttt
     4201 ccgccgcgct taggggcatt ttgcaacgta aattgttgct catatgctgc ttttagtcgc
     4261 tcgtatccgg catcgccctc tttcatacct gatttaatca gagcgtcttt tacttgcaat
     4321 gcgattttat ctttgccttt agccgaagca atcgcattgt tacgttcaat ttgctcgatt
     4381 ttttcaagat gtttaggatc gataattgca gcaccgttag catccagctt catacttgac
     4441 agattagcga ctagaatagc cgctctcata gcctctccgg caacgccacc aagagcatta
     4501 gcaatgttat tagcggcaat aaccatctcc ggtgatttga cggtaaaatt accgatagca
     4561 atatttaagc catcaacttt gatttggctt tcgtcaatgt gaggatataa tttgacaaat
     4621 tcctctcgta ggttagcgat tggaacgtga gcttgtaagg cttcttgagc ttctaaactg
     4681 gcatttaatg tattttgtgc tttttcaaca tcagcagtaa ctaactttaa ctcttcttgt
     4741 gctttcgcta actctttcgc acttttttcg aaacggacac cggcaccaaa ggcatcatct
     4801 aaaaccgtag ctccttgctc gatttctcgt gtaagttcag cttggcgttg tttcagacta
     4861 gctaatgctg tttcctgttc tttgatagaa cgagacaatt taaccatttc tgcatcagtt
     4921 tgagccttag tcattttttc gatattggct cgaacggagt ctaagctgtc cgcgtagcgg
     4981 agggcttctt cacgagctgc tttttgactt tcaaaaaatc cccaaagggc agtaccggca
     5041 gtcgttgcca ccattgcaag agtcattaat gggttagaca gtgcagctgc tttcagtaag
     5101 ttcaattcag ctcttgcagc cgctaaaacc ccattcatcg ctctggttgt tgtggttgca
     5161 gtgaccatac ctgcattcat tgcactttga gcaactgcat tttcagcata cgccactttg
     5221 agagcctgtt ttgttgcaat ttgctggcgt tcaaccgcta ttttctgttg cccgagagcg
     5281 atttctttct gatctagcgc ttgcagttca gcagataacg ctaatctttc cgtacgagtt
     5341 gccgccgctt gaatagcaac agcaatttct tctcgttctt ttgtgatttt ctgctgttta
     5401 accgcaatcg cctctaattc ggctttattt tgattgtagg tttgtaatgt ttgttccagt
     5461 tttaaggcgg tttgttgaga gagtacaacc aattcctgct gacgagtagc tatcgtttgt
     5521 tggcgagcct gattttccgc aataattgct tttcgattct cataaatcgc cgctctagcc
     5581 tcgataaatg ggcgtacact catatagcct ttgaaaagca caaatgcacc acctgcgaca
     5641 agtgctgttt tagcgaacgt atcaaaatga gcatttaacg cattcagaac ggcaacggct
     5701 ttctgtgacg caccaacggt actatccatt tcgccaaccc acttttcagc cgcagttgaa
     5761 agattttgca ttgctccact aattgtagtg gttgttttgg cgtactgtcc gtttacataa
     5821 ctctctgctt tttttagccc ctcaatcatt ttttcagcag acatctcacc gttatccacc
     5881 attgctttaa gttcggcagt ggtaatgcct aaccctttgg caatcgcctg aataacagac
     5941 ggtgtttggg tcatcaatga gttaaattct tgggctttga gcttacccat taacaacgat
     6001 tggctgaatt gcactagggc gtttgaagcg gttgccgaac ttgcaccgga aatagcaacc
     6061 gatttggcta ccgtttccgt tagttttgcc acatcgtttt gagaaatacc gagctgtttt
     6121 gcattttgag caaaggtctg ataaaccgaa gaggttgcct gtgtagattg ggcggttttg
     6181 agcgaaatat catacaccgc cgccattgct cgggcgtgtt gggattcact ttcggtgact
     6241 aatttgagtt tattaccgag ttcggtgtag ctattggcat aactaatcac tttacttgtc
     6301 gggaattgca accgatttgc aatttgccaa aaacgttctt ttgatacaga gctattaaga
     6361 ttatttgctg cttgttcaat attttttaga tattttgtcg atctatcagc aaattgacgt
     6421 gctttttgct gagcctgatc catattcaca atgaagctgc gagcaaactt atttgctact
     6481 gtatcagatt gtgcgaatcc agctagtaac ttagaatttt ctacatctaa ggtaatagtt
     6541 aatctgtttg agctactcac tttttcaccc caaataaaaa gcccgcataa agcgggctag
     6601 aattgatgtt aatttagatt tgacgattat ttttcatctc tttaactaat ttatccattt
     6661 tgcggcgata catttcggta tttcgccacc agtatttatc aagcaaatag gcagtcggga
     6721 aaagtactaa gatagaagct atccaccagt tcggcatact aataaagatg caagcgacca
     6781 aaaatacaat aattgcaatt ttaatcgtat taatcataaa acggtctagt gcttcaaaca
     6841 tacttccctc cttctctttg aggaaatata tatccaagag caaggaattt caagctgttt
     6901 tctttacctt ttcgccaaat aatctgccac accatcatct tctatttcct ccacctcatc
     6961 tgtccgatta aaaaacggca taaactccgc taattttgga gctttgcctt tcggatcacg
     7021 gttgaacatt gcggttaagt gggcaagttg ggcggtgcgg taatcgtctc gccataagcc
     7081 gaaaggctgt tcttggtaga aaagccgata ttcggcaaag tggcgttcgg gcatttgttc
     7141 gatttcttca agtgttttac ccagtgcgag cgaaagggtt atttggaact ttcttcgctc
     7201 gctgagtctt ttggggcgga cacggcttgg ttaaagtcga taatcacttt actgtctaat
     7261 tcggcaatgg cattcagatc gttaatgtcg agaggattaa acagtaatac accgttttca
     7321 tcacataagc ggtaggcaac cgattgagca aggcggtatt tttcgccaaa acggttgaga
     7381 gcctcatcaa aggtttcatc atcttctgcc ggtaattcaa cattttcttg ttcagcttgt
     7441 tgaatgagcc agcttcgggt ttcaaaaatc tgcttgttca tatcaccaac agtagcttca
     7501 cgcaggtagt aggtctcgcc gttgatttcg ataggttgca attttggttt attagcaagg
     7561 agtttctcac gcagtgtcat tgttcgttcc ttttgtaaaa ttctgatata aaaagaccgc
     7621 ttgttatttc tacaaacggt cgaattttat ggtttttttg caattaaact aataagtagt
     7681 cgcgtttgct tggcttaata gatacagagc cttcatactt acccttaact tcgcccgaga
     7741 aaccgttgcc ggcctcaata aagccttcgc cataggtcgt gccatggtta tccggtagtt
     7801 ccagtttgta ggcaaaggtg gatttgtcgt aaaagagttt gcgcaatcgg gtttgcattt
     7861 cggtagtagg cttgtggaag aaactgagtt tgatcgaacc aaattcaatt tcacccggct
     7921 cggtttctgt gccctctgaa caaaccgttg ttacatcttc ggtactcaaa gtatcatcag
     7981 atttttcaat gttttttacc gcgcagaatt gctccgagta ttgcactagt gccgccttgg
     8041 ctttggtgta attagctggt aaatctttac ctgtccagtt cacttcttcg cataatttta
     8101 cctgatcggt agttactgat aacaccgggt agataccatc taattgacca caacctgtaa
     8161 gctcgattgc atcacctttt ttatagcctg aggatgcaat cgttagagta gcagtattta
     8221 agttaattgc ggtaattgct ttttgagcct cacgtccaac gctaattcta aatttcgtgc
     8281 cttggacttt tgttgttttt gccattttaa gtctcctata gagattattt gtttaatact
     8341 caacatcaaa gattaatgtc gccatgtgcc acgtacgctg attctggtct tgctcatatt
     8401 gatactgaga gagcgcgact gactctaaat gctcaaattc gggataatca tcgataattt
     8461 cacgaatttt ttccgcccat tcgtctaatt catcttctgc actctcggta gatttcagat
     8521 ggattgtaat attgagcttg gcgtcccatt gattattaca aacagttatt tcttgcagac
     8581 tgatatcatc gagataaacc gatactgcaa gttgttcctc ctcaatatca ataaaagttg
     8641 gcagcccgtt ataaaaatta tcaatttccg gcaatttagt ctgtaataat tcaaggactt
     8701 cttttcggat ttttgtgtgg attttcataa tttccccgca atttgtttag ctaattccgc
     8761 ttgcacttgt tcgggatagt ttttcaattc tcgatcaaat gcttgtgtaa gtggttggga
     8821 taacggcact tttgctacat caatgccgta acgcttacga ccttgccggt acataatgtg
     8881 cgttcgccca ttggcgagtc gttggcgaaa accacgttgt acagtgtgtt tcccaactct
     8941 aatactgcct ttggtgggtg acaggcggtt ggacttgcgc tctagtaccc gaatcatcgg
     9001 catatgtgat cgattaacct taatcgtggc ttgcaatctt gacggcgtgg gctttgccgt
     9061 catttttgct ctacctttga ttgtcttttg atttacgcca atctctgccg ccaccgattt
     9121 aaccgcctta ttcattgctt gccgcccaac agtacggatt gcttgagcgg ctgctttagg
     9181 tacggtttgc ctagctattt ttttcaggga ggcttgcagt tcttttaaac cggtcacttg
     9241 agaacccatt gtttactcca attgcaatac gattaactga tcgacaaagt gataggattt
     9301 aacaaggtat ttcttgccat ttccgctcac tcggtcgtcc aatctcggtt tgtagccact
     9361 cgcccgaaat agggtcagtg tgcgttccgt gccgtgaata gctctgtcat cggttgagtg
     9421 taaaccgtta aaaatagcgg gggcttcatc aaaagttgca gggtaaggct tgccgccaat
     9481 caaccactca ctcatcatag tttgctgaat agtttgatcg gcggcagcta ttgcctgctc
     9541 aaacgggcta gacattgatt ttcacatcaa cttgattaga tgatgtgcca gagtctttcc
     9601 acgcaatgcc aagtcgttta tttgagcctg cggtgagagt tgcgccctct gtttcagacc
     9661 agtacaacac tgcaccttgt ttgatgtcat ctgcttgttt agcttttacg ctaaaaacac
     9721 cggtagttaa gccaactact gcatcatttt ttgccgcatc agaaactgca atcgcaatta
     9781 aatcctccgc cacaatgaca tcgccggaag taatcgcttt ggttgcagtt aaacgcacgg
     9841 tattgccgtc ttgaatatag tttttagcca tatctctttt tccttttttc ggataataaa
     9901 aaaccgcact gttaaaagtg cggtcaggtt ttaaattgtt taaattaagc gttggtcact
     9961 ttcaccacac cacggtagtc aatcacattc acaccagcat cgatacggac tttggtcgaa
    10021 acaccgtcca ccgtaaagcc gtgctgttgc tcgatgtaag ggctatccac cccgtccaga
    10081 taagagactt caatcgcctc tttattgagc aagtaccatg atttcggatc tgcaatttgt
    10141 aagcgaggcg atttaatcgg gctgacaata tcacggatcg ggttaatgat accgctgttg
    10201 atgtctgcac cttccacgct tgacgaacca agaatctgtt ttgctttggt atgcaatgag
    10261 gttggtaaca gcataaattc tggctcaata gagagcggtt caccacggct gtttacaaag
    10321 ccattcatta actggattgc cttgtcaatg ttttccacat tcaatgccgc acccgttaag
    10381 ctgtttttat gtgtagcatc aaacagcttt ttaccgtctt gggctgtcgc attgccggta
    10441 atcaaggcaa acaccagttt ggtaatagtc gctttggctg ctgcacccat tttctcaggg
    10501 attttagtta aaagatgcat atcgtcattg ataatcgcct gacgggtaat gctaaacagt
    10561 tgtccgtaag tcgccaatgc aacagatgca ccttcatcac cgattgtgcc gtaggtgtat
    10621 tcttcacctt cgcccacttc cggcaggtag ccaaactcac ctaaaccgac tcgttttgcc
    10681 ggtcggaagt cagtaagagt gccacgggtg gtaaactgct cgtagttttc ggtagcggtt
    10741 tcccagcctt tgagtaggga tttatgagcc acatcaatca agatttgacc gaagtcggag
    10801 ctcgaatgag taaaggcaag accgaccatc tgcattgggg tgtagcccgc aatacccacg
    10861 ccacgatcaa ccaatgaggc acgagccaac tcacgcaagg tcattgcatt gtaggcatta
    10921 tctcttgcgt tggttttgtc ggtatcttga ccagcacgag ccattaacga ctgcttcacg
    10981 ctgtcgccaa cgatgttacc gttacctgcg tgaatgtggt tttgcggtac gcttggggtg
    11041 gtgttttcgc ccagtttggc aaggagcttg tctttggctt gctcagcggt cattgacaca
    11101 tcagctaaac attctgccag caagccgtca aattgtgtgc cgaaagcggc aaaggtcgct
    11161 ttaatcgttg cattgcgttg ggctaatgcc accattgcat caggttttgc cacattttgc
    11221 ggattttcac ccgcttgtgg tggtgtttga ggttgttcat gttttggatt tgcacctgcg
    11281 ttgccttgtg gtgcgaatag catatttttg attttgtcag gcatttttgt gtagtcctct
    11341 aattttttgg attggataca agccatcgcc acaaggggtt cggctaactt atcggcgaaa
    11401 ccttgctcca cgcactcttt gcctgtgagc caagtttctt ctttcagcat ttctgccaaa
    11461 tcggtttcgt atttacctgt tttggcgaca tacgccataa tcagtgtact ttcaacctta
    11521 tccagtaaat ccgcatattt acgcatatca tccgcatcac cgccttgaat gccccacggt
    11581 ttgtggatca tcatcatagc gttttcaggc ataatgattt catcacctgc cattgcaatt
    11641 acgctagcca ttgatgcggc aagaccgtca atatagacgg tcttgttagc agggtgattt
    11701 tttagcaggt tgtaaatggc aatgccgtca aacacatcac caccgggcga gtggatatgc
    11761 agattgattt gttttaaatt gttgccaagg gcttttaagt ctttagcaaa ttgttgggcg
    11821 gtgacacccc aaaagccgat ttcgtcaaaa attgagattt cggcggtgtc attcgctttg
    11881 gcttgaatgt tgaaccacgt tttcacgcac cctcctgtta ttcatcttcg ttaatttcat
    11941 ctttttgatt ggagaaagat ttatcctgcc caccgtaatt ggtgagatcg gtatcaaatt
    12001 ttagcccttc ggcttgattt tctttgatct cgacaattcg ttgccgtttg acttcggctg
    12061 ggttattgcc actggctcgg attgcttgcc cttcggtggc taaaccgcct ttaattcgtt
    12121 ctttccacgc attcgcctct ttgattgggt caatccacgg cattacagga cctgaataaa
    12181 ccgcattaaa gagagagttt tggtcaatat caggcggcag tttgatcgct tgtgaggcga
    12241 ttgccatttt gagccattcc cgataaatcg ggcggctgat tgccgccaca aacgcatctt
    12301 gtagcaccgc ataaccttca aaactttcaa ccagctcttg tcgctgtgca gagtaagtgc
    12361 cgttgtagtc tcgggcgatg ctggaatagc tcgaacgagt accggcggca gtggctcgca
    12421 gttgtccatt gcggaaagtt tccaaattca cattcgggcg gttggaattg attaagccga
    12481 tgtcttcacc cggttttaaa tcatcaatca ccgcaccggg ggcaatatca aacaggcgtt
    12541 cgccatcgct gttactgtcg tcatcataca gtgccgcatc gcctttttta atgtacatcg
    12601 tcattgcggc ggcaatgcga gcggcaactc gttcgctctc ttcgtattct ttcagatccg
    12661 ccaatcgcac aatcacaccg tgcaacatac ttacaccacg aatttgatgt aaccgcttgc
    12721 gaaaggcgag gtgcaacata ttgtctgccg gcacggtttt cactttgccg tacattccgt
    12781 tgctttcttg cggattgtct aaatagactt ggtaagcagt cggcttccgc cacgcattga
    12841 gaaacacgcc ttgcaccaag ccgttttttg cctcatcgga ttgcattggc acaaaatccg
    12901 gctctaaggc ttcaagggaa aaagcaacct gtgagccgtg ttctaaccct gccaccttgc
    12961 ctttcaccaa ctgaacaaag acttcgccgt ctcgtagcca agtccgaagt agcattcgtt
    13021 ctagcaatgg gcgagtgtat aatcccgtca catcaggttt caccgaccat tccgcccaca
    13081 gctttcggat ttgcccagct aattcttcgt ggacttcacc tgccaacgtc agcggctgcg
    13141 gttcaatatg aatgcctttt gagccaatca cccgctcttc cattttgtcg agaatgccga
    13201 tcacaatatc gtgattttgg tctaaggctc gggcttgttc ccgtaggctg accgcacttt
    13261 ggcgaacagt agagtttgcc cctttgctct ctcggcttgc cttatgggtt cggctaggct
    13321 gtgccgcctc ataggcattt agcacatagc gatttcgaga gcgatttgcc gcccatttcg
    13381 gggaaagggt ggcaatggtt ttttcgagga agttcatcaa ataaacctcg catatttaat
    13441 tcgatgctgt ttggtgcgtt gcccgctttg ggcaagttgt tcatccagca ttgtttgata
    13501 gcgatcacgc tgtttggtta gttccgccac ttgatatgaa accgaccgac cattaaagct
    13561 cacttggctt tgggcggttt cgattttttc atcaagcgtg cggatttttt gtttaagctc
    13621 gtctatggtg taaaggctca tagccagcct cctgtttttc taccgccacc acttaaccaa
    13681 ctgctttttg ctttggtggg tttaggttgt ggtttttcgg atttttcttc aatttcgacc
    13741 gcttgttcag ccgttcttgg cgtttcccga atgatattag ggttgatgtc gggcagtttt
    13801 gcccagcttg gcacatcgtt ttcatcgccc catttgattc gttcgtagcc tcgtaaaatt
    13861 gcaatggcgt gggcatagca gaacaggtcg aaggcttcgt tattgccttt gcccggtttc
    13921 cgccatttgc cgtccgctcc tcgttcttcg taggtcaatt cgttaaaaaa ccattcacct
    13981 agccagtcgg ggaagtggat gtagttcgcc cccaccgtat cacggaacag ggcgttgtta
    14041 atccgatctt tgaggtagtc ggtttggagc aagtacaacg gcacatcgcc ccgtgcggag
    14101 gagtggcggt cacttcgtgc ggtattgtcg gggtaagttt tggtaatcag cttttgccgt
    14161 ttggtgctgt cgcctttgac taaatagact cgtttcgcat agccatctcg gcggcatttg
    14221 cgccaaaatt ggtaggcgtt atcggttacc ccatcttcac cgccactgtc caccgccatc
    14281 gccaaaatcg gcataaagtg gtttggattg tgggcaagtg ggtagcgttt ttctagtacg
    14341 tccgaaatca gtatgtacca atcatcggga atacgagggt caattttttc aatcacgcca
    14401 tcactgtcgg gcaaagtatg tgagatgtta tagcggtcaa tcaaccagcg ttcgccattt
    14461 tcaccgtaac cgaccatttg caccacaaat cggcggtttt taccgccctg tacgtccacc
    14521 gccgccacaa taaagcgaca ttgagctggt acagttttct cttctacttc ttctcggcgt
    14581 tccatcaact catcagaacg gcgttgttct aatgcagatc gtggtaagta aggtaacccc
    14641 cagtcggtat ttgttaccgc tttgagggtt tcctcactgc cagtcatttc atattcgtgt
    14701 tcggcattga gcagtttgta ggtgagctgc gcccacgttt ggtaggctgc cgctggccct
    14761 tcaagccaaa aggaggcaat acgggatttg cgactttcgc cactaatttg accgcttgca
    14821 tcaatttttt gcccctcttt gagccatacg cccttgatat ttagctctcg tttgagttcg
    14881 ggggcaatca gggtttggca gtgagggcat tgtaaccgtg cgttttcgct ggctttgaca
    14941 aaatcactgt cttcacggta gccgaccata tttgccattg acggctcgaa gtattcggag
    15001 cagtcggggc attgccagta aaaccgacgg cgatcacctc gattatagag gcttaaaata
    15061 ccggtagtcg gtggagcctc gtgggtgctt ttcgggatat gtttgagatc aacaatatct
    15121 ttaccgggcg aactctccac caaagtcatt cctgctgaca taaaggtggt cgtccgcttt
    15181 gaggcaagcg agaaaccgtc gccctctccg tccacatctt ccggccagcg gtcgtagtca
    15241 gtcagagcaa catatttgta gtccgatgaa gaaagcacat tgatagacgg ccagccgatt
    15301 ttgagcaagt tgcccgctct gaaatacttg tcgtggacat tgttatcgtt tttgcgtggg
    15361 cttagccgct tggcaatttc gggcgaacag cggaatgtgc ggtcaagccg ttttcggcta
    15421 tgttcgctag ctttctcttg ggtaagttgc accaacagga aatcagacgg atcgcagata
    15481 attgagtagg ttatccagcc gtcaatcaag ccgatggttt tacccgttcg tgccgggccg
    15541 acaaaaatca ccgcatcgta ttctcggcta ttgaggcagt ccatcggttc taacatatag
    15601 gcggcggtgt gcttatccca tttgaccgag ttgcctccgc caagtggtac acgcatatat
    15661 tccgctactg cttctgacac tctcattcgc cgaggtgctt ttatggcatt tgctatatca
    15721 cgtcgaattt ctttagcact agcaaacatt attcattctc cgtgtcagtg gtaacttctt
    15781 ggatatgtaa tgccatttgg tctcgtacat cgtcagttac ttgctgcact cgtatcaaat
    15841 ctttaggctg caatccgcag tctcgctcta aaatatcagg caaggtttct aaggcttgta
    15901 ctaccgtttt tgctaaagct gacatttcaa gagccacttc gcttgctggg ataagctcgc
    15961 caatttcttt ttcaaatttt agtctttcgt tttccgactg gaaccacgca cgacgatcag
    16021 caggtgatag gctatcgaca tctgccgaca tcttttccgc caacccggtg aggattaaat
    16081 cacgcagagc atagagtttt aatttgctat tactaccgag tgctggattt aacccagcga
    16141 ctcgctgaga taccgtctgg cggtgcaatc ctgtgagttc ggcgatctga ttgatgttaa
    16201 gttttagatc aaataagttg tccatttgct caaatcctaa aaatcaaaac cgcctaaaaa
    16261 acagcaacat cataggaaga tgatgatgcc tagaaactca aaaaattgcc gaaaaccacg
    16321 ctgccgcaac cccgtggaaa ggggtatccc ctcgggagta ccttttacaa actatgcaac
    16381 acattgctta gttatgatct tgatacaatc aaaagcataa ctaagtaatg taacgcaaat
    16441 gaaaagggag caattaagct cccactctca ttagcggttt aatccgccaa gttatttaaa
    16501 cccttgctta gtctgtgctt gccactctct aatacggtca atttgactcg cacacaaatc
    16561 acgctctccc attactttaa tgagataatc caccgtatcg ccgtaggttt taccgctaaa
    16621 tgctgtccgc tcgcacggca caaggtaagc cgcaggcgga tataaatact cagtgctgac
    16681 gattgttttg ctagtgcaac cgcttaatgc tatcagcaac accattaggc aaatcagcct
    16741 tagcacaact gtcttgtgcc agtattgatg taatttcatt cttggccatc tccactttat
    16801 tccgcagctc atttgcaatt ttttggattt tttcgaccgc ttgtcgctct tgctctaagc
    16861 tatcggttag ccgttgattg gctttttgct gctgctcaat ggtttgggct tgtgtttggt
    16921 tttcggctct taagccatca atctgcttgg actggtgcca aatccagcca cacaaaccca
    16981 aaatcattac tgtggcagct agataaatgt atttaatcat ttagtccgcc attagctttt
    17041 tataataagc tgtacgctga gttagaccgt gcgttccgcc attaatcttt ttagtaacag
    17101 taagaatgtc gctaaattcg gataacttgc gacttaccca gtaccaaaca gccacctgta
    17161 ctgtcaatgc tagattttta gtgatttggt cggggtcagt cactagactt ggtaagcctt
    17221 cccatttagc aaactcgata taatttgcct taccggtaat ttgaattaag ccacgcccac
    17281 gatatttcca accatcgcca ctttgttcat tgccgttacc cattcgattt gcatacaccc
    17341 gattagcaat agcacgctta tctcgagcat aaagtacgac attgtgttgg ctaaagtatt
    17401 tcgggaatgt tcgcaataga gcagttgcag aatagttaag gttttcttca aatacactat
    17461 atccggcaca ttctacacca cactgagcca agaacatcgc ttgttgctct tttgttttgc
    17521 agcctgcttt ttcaatgtgt ttgtcaataa ttgagtaaat accactaact gcattaggga
    17581 atacttgttt aaacttactt tcactaatcc acattttcac cacctgcttt tttgttcaag
    17641 aattttaaaa tcatctggcg aattgcactt gtacccaata atccaattcc cgcaccaata
    17701 ggggtaatca gtgatacatc agcattgaga taaattaaaa taggacgcat tgagccagca
    17761 ataacgctac acaagatagc ctctgccagc actcgtttag gtgtatctgt tttaccatac
    17821 agaaatgact tggtaataga tgtaaaaaaa gcaatgataa cgccacaaat ccagccatta
    17881 tgattgctta aaaacattac aagataattc caagcctgcg tatatatatc agggttcttt
    17941 tcaggcattg tattcatact ccaccccgtt tcgaggcaat aaaaaagccc agtcgtaaaa
    18001 ctgagccttg gttaaaaatt ctgctagaat actgttcccc aacaaataaa ctagcagagg
    18061 ttaaaaatga ttgaatttga tcaaattgac gatagtttct atcacttccc atttagacca
    18121 cgtccgggcg acacttcaag cgacactgcc acaccttgta ttggtggagt agatcttgtt
    18181 tccaatcctg aaaaggtaga actaatacca gaagccgcac actccccaat gttaaaaaag
    18241 ttactcacag acttgaacac tccaaacagc aaacttctaa cactaggctg tgcttattgg
    18301 gctcataaag acaatagaga tacatcatac gcttacttag agttttcatt ccgggaacat
    18361 tcagttgcaa ctaacctaga atttatcaga agtattgatg aacagttcga gcaattcttg
    18421 caagaaaata aaaagcagtt atctattgaa ttttccgtgc ctgagcaagc atttgatata
    18481 gtttcacaag ctcttttctg gagtattcgt ccattttctt acttcggaag cgaagagcgc
    18541 atcttgatat actttcaggc tggtagtcct cgacatcagg atttagaaat ctttttggat
    18601 ttactacacc gctttttgac tgagtattta gttgttccag cataacattt actcgcattt
    18661 ggaaagggtg gttggactca aaccaacaac caacgatttt ggagaccgtt gctctaccta
    18721 ttgagctaca cccttaaaat ccgtaaacaa aaaagcccca agcatttctg ctcagggctg
    18781 taaaattctt ttaagttcac cacctatgca atgaaccgca acttaccata aataatatag
    18841 attaagtccg aactttgcaa cactttttaa tcatttaaat gcaaaaaagc ccataattta
    18901 caaaaccatg ggctttttaa cgatattttg cttgaatata ttggttatcc aacatataat
    18961 aaacttgttt tcagtaatag tgctggaaac gagccggtgg cgacctttaa tcccaccgac
    19021 ttttggaggg ataacaaatg ctttaccgca ttatcctagt tatcattctc ttagtgatta
    19081 gcctgccagc atactaattg aatgaaacta agtaggggga gaaatctccc tactcttcaa
    19141 aacctatatt aaggatttat gatggcactg tcaagaaccg aaattgtaaa ccgtagcaac
    19201 gcaaaacggg gaattaaact taaagccttt aaactgcacg aaagcacaat cgcacaaatc
    19261 gagcaacttg cccaacagtt aaatattccc caaaatcaac taattaaatt agccgttgag
    19321 aagctacaag agcaaacgaa tttcactacc ggctaatgcc ccctccataa atcgttcagc
    19381 aagaagtaat tctgtatgat atgaagtctt gctgagcgat aacttctgcc aaacctgctt
    19441 attctctaac cctactgcat atttataaaa tagtacatcg aattgtcgct tgtcgttcgc
    19501 ttgtagcttc cgcatttgcc gatcgacttt ctcaagcgta tcatcatcta agcgggctaa
    19561 ataacgctgt tttgttctct cttgtggaga ctcacgcata aatgcctgca ttgtcggata
    19621 gcccttgcag tcggtaaaac gcacatatcc accccataaa tttaatacac cctttacatc
    19681 aatttgcatt acccaccgcc ttaatcttta acaccaccat tccccctttc ttaaaacctg
    19741 ccgtaatggt tcgcttatcg actaaaattt gattatcgtc ttcttcaatt aagccaccga
    19801 tttttaatgc gtcccacaag gctttttcta aattatctgg atcacgcttg cgtttatcag
    19861 gatagtaaat ctgcaatacc gtttgtaccg ctcctttaaa cggatcaaac attttgcaga
    19921 ttttcaccac ttccgcccta aaggctttcc ccttatctga aatataatgc ctaccgtttc
    19981 gggtatgctt ccagtaatgg ttcacactcg gcggataagg caacgcaatt tcaagccaat
    20041 cactcataat ttcccttctc tccgtaaaat agcctgcgtt ctaaatacgc cctctgcatg
    20101 agcctgtctc acataatccg cttctaattt gcgagttcta cggtcgcact catcgtggca
    20161 gctactgcaa gcccacgccc cgaaaatatc atcgggtttc attcccacac cgtttaatcc
    20221 tgccattcga tagtgagcca ataccaccgt ttccggatta tgattacaga tacccggtaa
    20281 acggacttgg cactctctgc cttttgcctc tttgcgtaga ttagccattc caacctcctt
    20341 ggtctctttt atcaaaccac tcaataaaaa agagtgaacc ggcacataca ctaagaatag
    20401 cgatagtgat taaaattaca gtcagttcat tgcactggct cacttattaa tctccttaaa
    20461 ttaaataaca ttccacataa aaggaataat ccgcaaccga taacaaacga tattaaaatc
    20521 caaaacccta actgaataat caccataaac cacggtgcgt ttttaatatt cattaaagta
    20581 gtattaatcg ccaataaaca gcttggaata atgccaaata acatcacgag tgcgatagtt
    20641 tcaaagaatt tttgtcattt tgatttctcc tacccccgaa ttcgagggaa ttaataaaca
    20701 cacactaaat cggattaaaa tcgctcttaa agtcatcaag gcattcttga tatttccatt
    20761 gaccgataac aataaaacta ccgactgcca caaaaaatgc taatggataa atcaataagt
    20821 acccgatata tctaagagta agaattgaca aagaaataag cactgcaata attctgaatg
    20881 gcacgctaag ccaatatcta ataacattct ttttcatttt aatctcctgc aattaaacct
    20941 aattaaatat ggcgatttcg ccttaattaa aaaaacgaat acaactgatt tatcgtattc
    21001 tcatctttgg tattgttaaa aacgtgcttg atagctgcat taatcaacgc tttataagcc
    21061 tgctcgaact cgtcttgttc catattggcg tagcttaggc ttttcgcctc aatccgcact
    21121 tgccctttta aattccacgt ctgcacataa aaccctgcca ttacagttaa atgcttgcgg
    21181 aaagtatcaa attgagcggt tggatcttgg aactcccaat cggaatggct accactccag
    21241 caatcaaaac agaaattaaa gaacgcaaac accttgcgat gaaaagcggg attacgctgg
    21301 cgtttaatct cgatttcgta ctgctcgcca ttctgaaacg atttcaaccg ctcggcttct
    21361 tcatcgttta acgggcttaa aatcccaccc ggcaatttca tcatttggta tttagccatc
    21421 tctatccctc aatgaaaatc caaaagctct aaataccaaa tatgctaacc acccgaagaa
    21481 aattagaatc cctaaaaatc caatagtaga atcactcatc acacttccca cccttcgtta
    21541 tttttcatag ccgcccagct ccttaatctt atccagcggc atttgacggg taactattcc
    21601 ctccacaaac gggtcgaaca ccgctaccat cgagcctttg ttgttgcctt tcacttcctc
    21661 gcctgtgagc ggattaataa aattaatacg cccaccgata atgtcgatca cctcactagc
    21721 gttttcttgg ataacctgat accaacgagt agatttgtct gccggcaaca gcattaccac
    21781 aatatgaccg gcttttttca gctccgcagc acgctgaaca aaagggagtg gattgctata
    21841 tggcggatta acgaagatac ggagtaattc gccccaatct gccacacgtt ccaagatcac
    21901 atcgagcaag ttttctgcca agaaatcctc ggcaatctga ccacttagcg tgtcttcgtc
    21961 caagccttct gccgctttgc caatccagta gctatacaat gcgtttttgc cgttagaaca
    22021 accgtcaatg tgaaaccacg catagcgatg atttagccaa ttacggaaat actttggcgt
    22081 ttggtaagtg tctttatcaa aatctgtcat tgcattgctc ctgcttgttt cttctcgtcc
    22141 aaaattcgct gaatgcgtgg atctattggc actttctttt tctcttcgat tagcggttta
    22201 ggtggtggaa tttgctctcc gctcataatt cgttttgcca ttgccactaa ggctttttct
    22261 gcttgattac gtaaggtttc atctttccaa ctatatttct tgttacgtgc gtataggtca
    22321 gttatcaacc aatattcagc gtttgattta aatttaagtt tctgaatctc aataaaatca
    22381 aatcttaaag agcgatccaa aagcttgagt aactgctcta aatcaggtaa tcctaattcg
    22441 tgatagtcaa tcgtattgca ccactggata aatttgccga tactcgggac gaaatcatca
    22501 gtttttgctc ttaacgcttt cataccctgt cgaacttgct caaccgtgcg gattccgttc
    22561 tccgcaaagc ctaaaatcca ttgttttttg gctgtggcaa cttgcttttc cgaccagtat
    22621 tgaatacttg ggcaactcgc aagcaactgg tcaaatattc tgtccacaag gctttcaacc
    22681 tcaccggata atttgccttg ctgctcacct aacaccgcaa gcggtcgatt ttgctctgtt
    22741 ttttgcaggc tcatcaaaac acctccgccc acgcttcagg gttattccat tcagctcgca
    22801 tattgtcttt tgggcgatgt ttaggttgat cgtcttgcca ctgccaatcg gctttaaatc
    22861 ctgtccagcc acgttcaatc gcaatttcta ccgccttttg aatcgggatt ttggctttgt
    22921 ctgcctctcg ctgatagcca ttcagtgcag tttcggtaat cggggctttt ttggctttgc
    22981 ggtgtacgat aaaatcctcc gccaatttgc ctgtaatgcc gaattgttca agcaacacca
    23041 acacagcaga ttttttagtc tcacgtgtgt gtgcgttaat acccgtaagg gtattattat
    23101 gatcattagt atttttataa ttagtattat tatttgtcgg atttaaatcc gagctttttc
    23161 ggatctgttt ccgagctaac tcggatttat ttccgagtgt cggatttaaa tccgagttaa
    23221 actcattcca agtcttccct ttttcagtta atcgaataag gtctttatct ccgtgttttt
    23281 gatacacgat caaccctttt ttgtgaaact cgacaaaatg gcgatagacg gtatcaggct
    23341 ttgagtaaaa caaaggtagt tcttcgatca ccgcattacg ggaaacccag taataaacca
    23401 cgccatcaat aatgatttct ttcgcccaag caggagcttg attcagtaaa tcaaataatg
    23461 ctccttgatt agcatttaag ttccattcaa ggcattttgc attgttgatg taagtgctaa
    23521 atctcatttc gcacactcca taaaatactg cttcactttc ttgccattcg gcactgtaat
    23581 aaatacgctt tgaatatcgt gaccacggtc acgcaaatct ttaatgcgag cggataaacg
    23641 caagcagccg aaatcgtcta acgcagaaag cgaagtaata cgaccgccat tttgaagatg
    23701 tgccaaaatt cttgcatttt gggtttgact tgatttttcg tttaggttaa gatttatccc
    23761 atacatatag gaaacctcct tagtaattag ccaccgttac agcggtggtt tttttaattg
    23821 ttaaaaaccc accacgcaag cagcataaaa attgccactc taataaaaat tgaattttta
    23881 ctgtggtaga atgatttgag ttttttagaa aaaactttcc ctttattgct tgtcatttgc
    23941 caattccggc cagcgtaagt gccaatcttc aattaaatgc tttctagtaa ctaaaccttt
    24001 tgtttcacgc tctatcgcaa cgcaaatttc cgcacctaat cgagaatttc ttgagatcga
    24061 ttttcttaaa tacccaactg tcgtattaca acgcaaggca aaactctctt gctcttttgt
    24121 ggttaaagaa ttgaggtatg cttttaattc ttccattgtg agtcctcttt taaaaacgcc
    24181 aaaataatac cattaggtaa aaataatatc aataccattt ggtttgttta ccttttagta
    24241 aataagagta caattactaa aaagtaatcc ttagaggagg ttatatgaat gagttgagac
    24301 ttcttagaca aaaaaaattg aaacgcctaa ttgatgaagt gagtgaggga aatattgctg
    24361 actttgcaag aaaaataggt aaagagccta gctatgtagc aagaatgttg tatccgtccg
    24421 ataaagctgg agctaagcct attggtgaaa aaatggcact ccatatttgc cataaatttg
    24481 tgctacccct tgattggttt aatcgagatg atgacggcga atttattcaa atcaacaatg
    24541 gtgaggaaga taatatcatc ttaagtgtat tgaatattca agcatcggcc ggtataggag
    24601 caaaaaacgg tgatgtgatg gaagtcatta gagaaattaa attcaatcca gaacaatttt
    24661 ataacctatt tagaggtatt acgcctgaac atatcgagct gatcagtgta aaaggcgatt
    24721 ctatggagcc aacattctca cacggtgatt tgctttttgt tgatgtaact atccaagaat
    24781 acgatggcga tggtgtgtat gtttttactt gcgatgacta tatttttgta aaaaggattc
    24841 aaaaaacagg cagacacttt actattttat ctgataatga ccgctataaa ccttggcaat
    24901 tagatcaaga aatttatatt cacggcaaag ttaaagtcca ccaaagc
//
LOCUS       DANLXO010000028        22812 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.028, whole genome shotgun sequence.
ACCESSION   DANLXO010000028 DANLXO010000000
VERSION     DANLXO010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22812
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.028"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            60..653
                     /gene="hisH"
                     /locus_tag="PXD69_000964"
     CDS             60..653
                     /gene="hisH"
                     /locus_tag="PXD69_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDL6283178.1"
                     /translation="MTNLTIIDTGCANLSSVKFAFDRLGIRAEISRDLNKIQSADKLL
                     LPGVGTAAAAMAILHDRRLIDTIRNATQPMLGICLGMQLMTDFSHEGDVATLNLMSGK
                     TERLPECGLPLPHMGWNKVQYQADHPLFHDIEQGNHFYFVHSYGVLPNENTIATCDYG
                     VPFSAAIASQNFYGVQFHPERSGEAGAKLLRNFVENV"
     gene            752..1597
                     /locus_tag="PXD69_000965"
     CDS             752..1597
                     /locus_tag="PXD69_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor protein"
                     /protein_id="HDL6283179.1"
                     /translation="MNEIKLFENSQIRSVWDSEKEEWFFSVVDIIEVLTQSSNPRRYW
                     SDLKRKIKDEEGGIELYEKIVQLKLKAPDGKMRETDATDLQGIFRIIQSVPSPKAEPL
                     KMWLAEVGKERIDEIIDPELTIDRALATYLKKGYSREWINQRLQAIQVRKELTDTWQD
                     HGVQVGREFAILTNEITQAWSGMTTRQYKDFKGLKKESLRDNMTTTELVLNMLAEAAT
                     KDIAQISHPQGLEENKTVAKRGGNVAKVARESLEAETGKPVITQQNAIDFAAVIEQVA
                     KQVKK"
     gene            1767..2516
                     /gene="hisA"
                     /locus_tag="PXD69_000966"
     CDS             1767..2516
                     /gene="hisA"
                     /locus_tag="PXD69_000966"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDL6283180.1"
                     /translation="MQKSIIIPALDLIDGQVVRLHQGDYAKQTTYADDPIAQFADYLA
                     QGAEQLHLVDLTGAKNPAQRQTALIGKIIRETHCKIQVGGGIRTEQDVADLLAVGANR
                     VVIGSTAVKEREMVKGWFKKYGAEKFVLALDVNIDAIGQKIIAMSGWQEASGVSLEEL
                     IEDYQTVGLQHVLCTDISRDGTLAGSNVDLYREICAKYPEIQFQSSGGIGSLADIKAL
                     CGTGVAGVIVGRALLEGKFNVAEAIECWQNG"
     gene            2498..3271
                     /gene="hisF"
                     /locus_tag="PXD69_000967"
     CDS             2498..3271
                     /gene="hisF"
                     /locus_tag="PXD69_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDL6283181.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAQRYAQEGA
                     DELVFYDITASSDSRTVDKSWVERVAQVIDIPFCVAGGIKTIADAEQIFAFGADKISI
                     NSPALANPELITELAKRFGVQAVVVGIDSWFEAETGKYWVNQYTGDEKRTRQTEWQLL
                     DWVEEVQKRGAGEIVLNMMNQDGVRNGYDLVQLKKVREVCQVPLIASGGAGEMVHFRD
                     AFIEANVDGALAASVFHKQIINIGELKEYLAKEGVEVRR"
     gene            3268..3654
                     /locus_tag="PXD69_000968"
     CDS             3268..3654
                     /locus_tag="PXD69_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL6283182.1"
                     /translation="MIKITALDHLVLTVADMQKTIDFYTTILGMQEITFGDNRKALLF
                     GTQKINLHQKGAEILPNAQNADCGTADLCLLTVTPLQEVIYVLQRHQVEILEGGIVPR
                     TGAVGKIESVYCRDPDGNLIEISLYV"
     gene            3682..4320
                     /locus_tag="PXD69_000969"
     CDS             3682..4320
                     /locus_tag="PXD69_000969"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDL6283183.1"
                     /translation="MQNKIDWQKVDGLLPVIVQNAQTCEVLMLGYMNQQALEKTLAEK
                     RVTFYSRTKQRLWTKGETSGNFLNVVDMSLDCDNDTLLILANPIGETCHTGAESCFHQ
                     FEQEQPDWIFFSKLERMIAERKNADPESSYTAKLYAKGTPKIVQKVGEEAVESVIAAM
                     KNDREELVGEVADLMYHLTVLLHNADLSWAEINAKLKERHKGIGLHPEGSNK"
     gene            complement(4394..5287)
                     /gene="hslO"
                     /locus_tag="PXD69_000970"
     CDS             complement(4394..5287)
                     /gene="hslO"
                     /locus_tag="PXD69_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDL6283184.1"
                     /translation="MNYTKDNDKLYRYLFKDRAVRGEWVRLNNTFTETLNTHHYPKAV
                     QNLLGEMLVATSLLTATMKFNGNITVQIQGDSPLKLAVVNGNDQQQLRALARVQADIA
                     DTASLAEMIGNGVLVISIIPTDGERYQGVIALDKPTIRECLEDYFARSEQLQTHLVIR
                     TGEFEGKAVAGGMLLQIMPDGTGSRDDFEHLATLTETVKDEELFGLEAEELLYRLYHE
                     EQVEVYPPQDTEFKCGCSRERSGSALLLVPAEEIEEMLEEKQGVIDMQCECCGTQYFF
                     DKAAIEGFKEETEKLSKLGLN"
     gene            complement(5531..5947)
                     /gene="hslR"
                     /locus_tag="PXD69_000971"
     CDS             complement(5531..5947)
                     /gene="hslR"
                     /locus_tag="PXD69_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HDL6283185.1"
                     /translation="MKNKHEKEQNDAEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYN
                     GQRAKVSKAVEIGAIIKLRQGNEEKEVEVLALSDQRRGAPEAQLLYSETEKSIKHREA
                     MAFARKANALSMPHPDRRPNKKERRDLIKFKEQEFS"
     gene            6035..6577
                     /gene="nudE"
                     /locus_tag="PXD69_000972"
     CDS             6035..6577
                     /gene="nudE"
                     /locus_tag="PXD69_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HDL6283186.1"
                     /translation="MIKQLPEILNIKTVAKSRIFEVQAVDLRFSNGEERTYERLTPNR
                     RSSVMVIPIQNNELIFVKEYAVGSERYELGFPKGIVDAGEEPIESANRELQEEIGFGA
                     KKLDFLRSLYSSPSHMYGLMHLFLAQDLYPSKLEGDEPEPLEIVRYPLDKIDQLLADP
                     DFAEARNLSALFMLREYLKK"
     gene            6591..7409
                     /gene="cysQ"
                     /locus_tag="PXD69_000973"
     CDS             6591..7409
                     /gene="cysQ"
                     /locus_tag="PXD69_000973"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDL6283187.1"
                     /translation="MQTLTQPLLENIINIAKAAGEQLKQLYARSVAIKIKADCTPVTE
                     ADLIISQFLTERLKQLTPDIPVLSEEFCDIPFAERQQWQEYWIIDPIDGTQQFINRTG
                     QFSVVIALVQKREGRNQPVLGVIHAPILGKTYFSMEGSGSFLQENGEIRPLVKPKRAE
                     NALLIVTVGSDLHAEQAKNAISAPQIECVKYGSGSLKAGLVAEGKADCYIRFGDTGEW
                     DTAVAEVLLSEMGGKIFDFNFSPLTYNQRESLINPYFVMVADGSIDWDKIFLFK"
     gene            7484..8971
                     /locus_tag="PXD69_000974"
     CDS             7484..8971
                     /locus_tag="PXD69_000974"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDL6283188.1"
                     /translation="MNAENSCIVIFGASGDLTFRKLIPALYNLYKIGRLGEHFSVLGV
                     SRSELTDESFRQKMRDALVKFEKASGEELDKFCEHLYYQAVNTSDAVDYAKLLPRLDE
                     LHDKYQTAGNTLYYLSTPPSLYGVIPECLAAHGLTTEEFGWKRIIVEKPFGYDIETAK
                     KLDVQIHKCFEEHQIYRIDHYLGKETVQNLLVLRFSNGLFEPLWNRNFIDYVEITGAE
                     SIGVEDRGGYYDGSGAMRDMFQNHLLQVLAMVAMEPPAIINANSMRDEVAKVLYCLHP
                     LTEEDVKHNVVLGQYARGTVDGKEVPAYLEEKGVPADSNTETFMAVKCKIDNWRWAGV
                     PFYVRTGKRLPTRVTEIVIHFKTTPHPVFSQNAPENKLIIRVQPDEGISMRFGLKKPG
                     AGFEAKEVSMDFRYSDLSSSSSLLTAYERLLLDALKGDATLFARTDAVHACWKFVQPI
                     LAYKANRGRVYEYESGTWGPTEADKLIARHGKVWRKPSGTMKKKV"
     gene            9111..9809
                     /gene="pgl"
                     /locus_tag="PXD69_000975"
     CDS             9111..9809
                     /gene="pgl"
                     /locus_tag="PXD69_000975"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HDL6283189.1"
                     /translation="MNKVIFPTAQAAVEQIAKEFIEYSHQNRPVHISLSGGSTPKLLF
                     KTLAQAPFNTEIQWQNLHFWWGDDRMVAPTDPESNYGEVQKLLFDHIDIPSENIHRIR
                     GEENVEQELARFSAELTACVPNLAFDWIILGMGTDGHTASLFPHQTDFNDQNVAVIAK
                     YPETGQIRISKTASLIEKAKRITYLVTGASKAEILKEIQTTPAENLPYPAAKIQAENG
                     VTEWYLDSEAANLL"
     gene            9985..10872
                     /locus_tag="PXD69_000976"
     CDS             9985..10872
                     /locus_tag="PXD69_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HDL6283190.1"
                     /translation="MNPIQLIEPNINSKIFTIRGEQVMLDVHLAELYQVDTRTFNQAV
                     KRNEERFPDIFRFQLTENEWLSLRSQFVILNENSGRGQHRKYLPYVFTEQGIAMLSAV
                     LRSEVAVQVSIKIMQAFVQMRHLLQTNSGLVQRLESVERKQLEMSGQLEQVFQSLEGN
                     KPKMQGVFFEGETFNAYQFVTELVRGAKSSLILIDNYVDDTVLTLFTKRSHNVSVTIY
                     TKQISKQLALDLEKYNSQYAHINVKIFDKSHERFLIIDEKELYHIGASLKDLGKKWFA
                     FSKMDLSMSRILEKLAENQ"
     gene            10882..11571
                     /locus_tag="PXD69_000977"
     CDS             10882..11571
                     /locus_tag="PXD69_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDL6283191.1"
                     /translation="MKTLGILGGMSAESTVSYYLDINRSVNKVLGGNSSAKILISSVN
                     FEEIVQCQKQGNWQAAAEILSEQARLLEQAGAEGILLATNTMHKIADQISSHISVPFL
                     HILDCVAEAISAQGLQKVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEIHRII
                     FEELCLGKITESAKAFYLQTIQQLSEQGAEGVILGCTEIGLLINQNDNPLPFFDTAAL
                     HSQMAVEFILG"
     gene            11654..13108
                     /gene="gnd"
                     /locus_tag="PXD69_000978"
     CDS             11654..13108
                     /gene="gnd"
                     /locus_tag="PXD69_000978"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HDL6283192.1"
                     /translation="MSQKGDIGVIGLAVMGQNLILNMNDNGFKVVAYNRTTSKVDEFL
                     EGAAKGTNIIGAYSLEDLAAKLEKPRKVMLMVRAGEVVDQFIEALLPHLEEGDIIIDG
                     GNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGDESAWQYVKPIFQA
                     ISAKTDKGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFLKDGLGLSYDEMH
                     EIFKEWKNTELDSYLVDITTDILAYKDEDGEPLVEKILDTAGQKGTGKWTGINALDFG
                     IPLTLITESVFARCVSAFKDQRVAASRLFNKEIGKVEGDKKVWVEAVRRALLASKIIS
                     YAQGFMLIREASEQFGWDINYGNTALLWREGCIIRSRFLGNIRDAYEANPYLVFLGSD
                     PYFKDILENCLADWRKVVAKSVEIGLPVPCMASAITFLDGYTSARLPANLLQAQRDYF
                     GAHTYERTDKARGEFFHTNWTGRGGNTASTTYDV"
     gene            13243..13836
                     /locus_tag="PXD69_000979"
     CDS             13243..13836
                     /locus_tag="PXD69_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL6283193.1"
                     /translation="MLTDQDIFNRYQTKKSEFEKQADISLIGHSLFDMWGDMENGTPN
                     LAGKTVANLGLSGTSTRQYLDVITRQERIQHVGDNVFIFLGVNDIVKEPDYSPKQVLE
                     WIGEIVDSLRKINPNANFFLLEATPVNNITTTNNAAIKELNAYFEANIPSDLTYVKTW
                     EYFADKEGNLDLTLCHDGLHFTQAGYDRLEAILTKHL"
     gene            complement(13907..16771)
                     /locus_tag="PXD69_000980"
     CDS             complement(13907..16771)
                     /locus_tag="PXD69_000980"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDL6283194.1"
                     /translation="MTKQFTMEDRFNPSAVEQALYQHWESQGYFKPSEDINAPSYCIA
                     IPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAA
                     EEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVK
                     EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGAKTAD
                     GLDYLVVATTRPETMLGDTAVAVHPEDERYQALIGKSVILPLANREIPIIADEYVDRE
                     FGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTLNADIRAEAEIIGTDGKPLSDYTAPI
                     PADYQGLERFAARKKIVADFEALGLLDQIKPHDLKVPYGDRGGVPIEPMLTDQWYVSV
                     KPLAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGN
                     VYVARDEAEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPT
                     DVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKG
                     NVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIVAHGTDALRFTL
                     TALASNGRDINWDMKRLEGYRNFCNKLWNASRYVLTNDKLDLSEGDVEFSLADRWIES
                     QFNRTVETFRTALSQYRFDLVANAIYEFTWDQFCDWYLELTKPIFFKGTDVQRRGASR
                     TLVNVLEKLLRLIHPVMPFITEEIWQKVKGFVGIEADTIMLQKFPQFDPLAIDETAES
                     QINFIKEVIVAVRNIRAESNIAPSKGLDLIARNFSADEVSILNANEVLLKSMAKLDSV
                     KVLENGENAPLSVAKLVANGEILIPMAGFINKEAELARLTKEMDKLKGEVARIEGKLS
                     NEAFVAKAPEQVIAKEREKMQEYLSGLEKLQVQYQEIEAL"
     gene            complement(16888..17586)
                     /locus_tag="PXD69_000981"
     CDS             complement(16888..17586)
                     /locus_tag="PXD69_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283195.1"
                     /translation="MKQNRKKSKKVIGTHKKENGLKQFIKNNKIPIILISAIWSIFTT
                     DILERIANMPIIWKNFEENYLYNKKLDGLWSTNTNYIIDYKLLNIPEEQPNVIIEFMV
                     NKDDNSILGEMTSTALCELIPLTWSFRLESPKPTLLNLIFDRELKLSYLVSGGYTELS
                     TFKIKEINSNLGTLTLTTQEDKTGIFPPTIKLINFSSNIEDDIKEIEQSCLNSRKQLW
                     EKRRKMQEEQKIPN"
     gene            complement(17831..18424)
                     /locus_tag="PXD69_000982"
     CDS             complement(17831..18424)
                     /locus_tag="PXD69_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283196.1"
                     /translation="MHNNLAIFYCGTNGAGKSTLRSFNQDKVEIVIDSDNIAMQINPL
                     NPRLADIEAGRKAIELFQFAVKNQVAFSMESTLSGKSILKRMENAKAGYFKTRLNYIG
                     VDSYKINIARVKARVKAGGHFIDEETIRKRYHISRENLIEAIFINDETLIYDNSETKP
                     NLILQIADKKVIKISDKIPNWCNQLCDELVELGFKTT"
     gene            complement(18414..18584)
                     /locus_tag="PXD69_000983"
     CDS             complement(18414..18584)
                     /locus_tag="PXD69_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283197.1"
                     /translation="MTSREELLKKQRELDILFTAWFEEKKKHEVLTYRRENGDLIQHY
                     PDGTEKVIEYAQ"
     gene            complement(18586..19328)
                     /locus_tag="PXD69_000984"
                     /pseudo
     CDS             complement(18586..19328)
                     /locus_tag="PXD69_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
     gene            complement(19325..19768)
                     /locus_tag="PXD69_000985"
     CDS             complement(19325..19768)
                     /locus_tag="PXD69_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6283198.1"
                     /translation="MLKNLSWRAKRFDELSTQELFEIYHARTAVFVVEQNCPYQEVDN
                     KDLQAVHFFTKNAKNLTAYCRLIPANDGVHIGRVLVVKENRGSGLARELVQKAMDYCG
                     EHFPAQPIHAQAQSYLQGFYESFGFKAVSEVYLEDGIAHLDMVLE"
     gene            complement(19762..20199)
                     /locus_tag="PXD69_000986"
     CDS             complement(19762..20199)
                     /locus_tag="PXD69_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HDL6283199.1"
                     /translation="MKQVQFYLLSQADAAELSAAEMQACELAAQAWRLGKRVLIACET
                     EQQALNIDEALWARDPDSFVPHNLSGEITTYPTPIEISWKGKRNAQRRDLLISLQTQL
                     PEFIGSFTQIIDFVPVEETAKAQARDRYKQYRQLGWQLETIQC"
     gene            20438..20881
                     /gene="lysM"
                     /locus_tag="PXD69_000987"
     CDS             20438..20881
                     /gene="lysM"
                     /locus_tag="PXD69_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
                     /protein_id="HDL6283200.1"
                     /translation="MGLFDFVGDIGRKLFNKEEDASKAVTEHLAEDNPGVENVNVTVE
                     NGVAKISGIASTAAAVEKAVLMAGNVAGITEVNIDEVTLPDDVQLASDDELYVIQKGD
                     TLWEIATKAYGNGAKYKAIVEANKEVIKDENKIFPGQKIRIPKGL"
     gene            complement(20935..21786)
                     /locus_tag="PXD69_000988"
     CDS             complement(20935..21786)
                     /locus_tag="PXD69_000988"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDL6283201.1"
                     /translation="MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEF
                     PLVTTRRSYWKAAIAELLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGED
                     DMGLVYGAVGRNFPKPDGGSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPC
                     LHSHHFSLLDGTLYLNSTQRSADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIV
                     NAHIYEDQLELMRDVQLKREPLNAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPA
                     IQYPFSV"
     gene            21879..22430
                     /locus_tag="PXD69_000989"
     CDS             21879..22430
                     /locus_tag="PXD69_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283202.1"
                     /translation="MKGIMKSILVFSTAVFLAACSSNKSGWTRLNDNDVDQKSYAIAY
                     GATAQTYADRVNESYDINSFMNGVNDWYTKKVTLPIEQIRAITINRMLDHNVYAYYSG
                     VIYAADLQANFNHLDPNCWGLVQPASMTQGIHDAMLDLQKNKVRGDEYIKNGVEQILH
                     LCVKTIAEDENESQSKGKTKKHK"
     gene            22639..22733
                     /locus_tag="PXD69_000990"
     tRNA            22639..22733
                     /locus_tag="PXD69_000990"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22674..22676,aa:Ser,seq:gct)
BASE COUNT         6519 a         4643 c         5073 g         6577 t
ORIGIN      
        1 aacagatata ttgagtcaat tttacttcac tataagaaat acttaactca ggaaactaaa
       61 tgaccaacct caccatcatc gacacaggct gtgccaacct gtcttcggtc aaatttgctt
      121 ttgaccgtct tggcattcgg gctgagatct cgcgagatct caacaaaatc caatctgccg
      181 ataaattgct actccccggt gtgggaacag cagcggcggc gatggcgatc ttgcacgatc
      241 gccgacttat cgacaccatt cgcaacgcca cccagccgat gcttggcatc tgcttaggaa
      301 tgcagttaat gacggacttt tcccacgaag gcgatgtggc aacactgaac ttaatgagtg
      361 gcaaaaccga acgcttgcct gaatgcggtt tgccgttgcc gcatatgggc tggaacaagg
      421 tgcaatacca agccgaccat ccgctatttc acgacattga gcaaggcaat catttctatt
      481 ttgtgcatag ctacggtgtg ctaccgaatg agaacaccat cgccacctgc gactacggcg
      541 tgccgttttc cgctgccatt gccagccaaa acttctacgg cgtacagttc caccccgagc
      601 gttcgggcga ggctggggcg aagttgctca ggaattttgt ggagaatgtc tgattttgtg
      661 atctcgatcg aaaagtttga aaatagggct tgatttctcg ctttatttcg acaaaattac
      721 tgttaattta accagtgaaa gaaggtgaga aatgaacgaa attaaactat ttgaaaacag
      781 ccaaatccgc tcggtgtggg atagcgaaaa agaagagtgg tttttctcgg tggtggacat
      841 tatcgaggtg ctgacgcaaa gtagcaatcc acgccgttat tggagtgatt taaagcggaa
      901 aatcaaggac gaagagggcg gaattgaact gtacgaaaaa atcgtacagt tgaaattaaa
      961 agccccagac ggaaaaatgc gggaaaccga tgccacggat ttacaaggca ttttccgtat
     1021 tattcagtct gtgccaagcc cgaaagccga gccgttgaaa atgtggctgg cagaggtagg
     1081 caaagagcgg attgatgaga ttatcgatcc tgaattgacc attgaccgag ctttggctac
     1141 ttacttgaaa aagggatatt cccgtgagtg gattaaccaa cgcttgcaag ccattcaggt
     1201 gcgaaaagaa ctgacggata cttggcaaga tcacggtgtg caagtgggca gagaatttgc
     1261 gattctcacc aatgaaatca cacaggcgtg gagcggtatg actactcgcc aatataagga
     1321 tttcaaaggg ctgaaaaagg aaagtctgcg agacaatatg acgaccaccg agttggtgct
     1381 gaatatgctt gctgaggctg ccaccaaaga catcgctcaa atcagccacc cacagggctt
     1441 ggaagaaaat aaaaccgttg ccaaacgggg cggaaatgtt gcaaaagtgg ctcgggaaag
     1501 tttggaggca gagaccggca aaccggtgat tacgcaacaa aatgcgattg atttcgctgc
     1561 ggtgattgaa caagtggcga aacaggtgaa gaaataagtg cggtcggttt tttgcaagtt
     1621 tttggaagaa tttgaccgct tgtaccccat acgagccgta tggggctaga taaaccaagc
     1681 tactccgtag cttagagagg cagtcgcagc gcgactggga ttattcagcc tagcacggct
     1741 cgtgctaggc acacaggaac aataatatgc aaaaatccat cattatcccc gccctcgacc
     1801 ttatcgatgg gcaagtagtt cgcctacatc agggcgatta tgcgaaacag acgacttatg
     1861 ccgatgaccc gattgcccaa tttgccgact acttggcaca aggggcggag cagttacatt
     1921 tggtcgatct tacaggggcg aaaaatccgg ctcaaagaca gaccgcactt atcggcaaaa
     1981 ttattcgtga aacccactgc aaaattcaag tgggcggcgg tatccgcacc gagcaggatg
     2041 tggcggattt acttgctgtt ggagcaaacc gtgtggtgat tggttcgact gcggtaaaag
     2101 agcgtgaaat ggttaaaggc tggttcaaaa agtacggtgc ggagaaattt gtgctggcac
     2161 tggatgtgaa cattgatgca atcggtcaaa aaatcattgc gatgagcggc tggcaagagg
     2221 caagtggtgt gtcgctcgag gagttgattg aagattatca aaccgtgggc ttgcaacacg
     2281 ttttatgcac cgacatttcc cgagacggca cgctggcagg ttcaaatgta gatctctatc
     2341 gagaaatctg tgccaaatac ccagagattc aatttcagtc ctcaggcggt atcggctcgc
     2401 ttgccgacat caaagcgctt tgtggtacgg gcgtggctgg cgtgattgtc ggtcgtgcgt
     2461 tgttggaagg taaatttaat gtagcggagg caatcgaatg ttggcaaaac ggataattcc
     2521 ttgtttagac gtgcgtgacg ggcaagttgt gaaaggcgtg cagttccgca accacgaaat
     2581 catcggcgac attgtgccac tcgcccagcg ttatgcccaa gagggggcgg atgagttggt
     2641 gttttacgat attaccgcct caagtgacag cagaacggtg gataaaagct gggtggaacg
     2701 tgtggcacag gtgattgata ttccgttctg tgtggcaggc ggaatcaaaa ccattgccga
     2761 tgcggagcag attttcgctt tcggagcgga caaaatctcc atcaattccc cagcccttgc
     2821 caaccccgag ctgattaccg aactggcaaa gcgctttggc gtgcaggcgg tggtggttgg
     2881 tattgatagc tggttcgagg cagaaaccgg caaatattgg gtcaatcaat ataccggcga
     2941 tgaaaaacgc acccgccaaa ccgaatggca attgttggat tgggtggagg aagtgcaaaa
     3001 gcgaggagca ggcgaaatcg tgctgaatat gatgaaccaa gacggcgtac gcaacggcta
     3061 cgatttggtg caactgaaaa aagtgcgtga agtttgccaa gtcccactca tcgcctcagg
     3121 cggtgcaggc gaaatggtgc atttccgtga tgcttttatt gaggcaaatg tggatggtgc
     3181 gttggcagcg agtgtgtttc ataaacaaat tatcaatatt ggggagttga aggaatattt
     3241 ggcgaaggaa ggggttgagg tgcgtagatg attaagatta ctgccttaga tcatctggtt
     3301 ttaaccgttg ccgatatgca aaaaaccatt gatttttata cgaccatttt gggtatgcaa
     3361 gaaatcacct ttggcgataa tcgcaaagcg cttttgtttg gcacacagaa aatcaacctc
     3421 caccaaaaag gtgcagaaat cctacccaat gcccaaaatg ccgattgtgg cacggcagat
     3481 ttatgcctct taacggtaac tccacttcag gaggttatct atgtgttaca gcgacatcag
     3541 gtggagattt tggaaggtgg gattgtgcct cgtacggggg cagtgggaaa aattgagtcg
     3601 gtttattgcc gtgaccctga tggtaatttg attgaaataa gcctatatgt ctaaacaagc
     3661 ggtcaaaaaa aggaagaaaa aatgcaaaat aaaatagact ggcaaaaagt ggacggctta
     3721 ctgcccgtta tcgtccaaaa cgcccaaacc tgcgaagtac tgatgttagg atatatgaac
     3781 caacaagccc tcgaaaaaac gctggctgaa aagcgagtga ctttttactc ccgtactaaa
     3841 caacggctgt ggacgaaagg cgaaacctcg ggcaatttcc taaacgtggt ggatatgagt
     3901 ttggattgtg ataacgacac cctgttaatc ctcgctaacc ctatcggcga aacctgccat
     3961 acgggggcgg agagctgttt tcatcagttt gaacaagaac aaccagattg gatctttttc
     4021 agcaaattag aacgaatgat agccgaacgt aaaaatgctg atccggaaag ttcttatacc
     4081 gctaaacttt acgccaaagg cacgccaaaa atcgtccaaa aagtagggga agaggcagta
     4141 gaaagcgtga ttgcggcaat gaaaaatgat cgggaagagt tggtcggtga agtggctgat
     4201 ctgatgtatc acttaacggt gttattgcac aatgccgatc tctcgtgggc agagatcaat
     4261 gctaaactaa aagaacgcca caaagggatt gggttacacc cagaaggctc aaataagtaa
     4321 aatgcaagcg gtcaaatttc accgtttttt tacaaattgc aaaaaagaca agaaacttga
     4381 ccgcttgttt agcttaattt aaccctaact tacttaattt ttcagtttct tccttaaagc
     4441 cttcaatcgc cgctttgtca aagaaatatt gtgtcccgca gcattcacat tgcatatcga
     4501 tcacgccttg tttttcctcc aacatttctt cgatttcttc tgccggcacc agtaataatg
     4561 cggagcctga acgctctctt gagcagccac atttaaattc agtatcttgt ggtgggtaaa
     4621 cttctacttg ctcttcgtgg tagaggcgat agagcaattc ttctgcctct aaaccaaata
     4681 actcttcatc ttttacggtt tcagtgagcg tggctaaatg ctcaaaatca tctcttgagc
     4741 ctgtgccgtc cggcataatt tgtagcaaca taccgcctgc cactgctttg ccttcaaatt
     4801 cgcctgtgcg gataacgagg tgggtttgta attgctcgga gcgggcgaag taatcttcta
     4861 aacattcacg aatggttggt ttatcgagag caatcacccc ttgataacgt tcaccatcgg
     4921 ttgggataat agaaatcact aatacaccat tgccgatcat ttccgctaac gaggctgtgt
     4981 ctgcaatatc tgcctgaaca cgggctaaag cacggagttg ctgttggtcg ttaccgttca
     5041 caaccgccaa ttttaacggg ctgtcacctt gaatctgcac agtaatgttg ccgttaaatt
     5101 tcattgttgc agtcagcaaa ctggttgcga ctaacatttc tccgagtaaa ttttgtactg
     5161 ctttagggta gtgatgggtg tttaaggtct cggtaaaggt gttgtttaaa cgcacccatt
     5221 cgccccgtac cgctcggtct ttgaataaat agcggtagag tttgtcattg tctttggtgt
     5281 aattcatttt gattcctcgt tgcaagcggt cgattattac tcacaaaatt atttctaatt
     5341 ttgttcgctc ctacggagcc gttggcaaag ccaacgttca aaatgcattg cattttgtgg
     5401 ctaaaaatgt gcaaatcgaa cgctgtaggg gcgaatcaat gttcgcccga aataattata
     5461 taggggcgaa aaatttttcg cccctactta ggatattcaa tatagggatt atttttctga
     5521 ttgcaagggc ttagctaaat tcttgctctt tgaatttgat taaatcccgc cgttcttttt
     5581 tgtttggacg gcgatcaggg tgtggcattg aaagagcatt cgctttgcgg gcaaatgcca
     5641 ttgcctcacg gtgtttaatg cttttttcgg tttcactgta gagcagttgg gcttccggag
     5701 cccctcggcg ttggtcactg agggctaaca cttccacctc tttttcttca ttgccttggc
     5761 gaagtttgat gatggcaccg atctccaccg ctttgctaac tttagctctt tgcccattat
     5821 aatggacttt acccccttca atcattgctt tggcaatcga acgggtttta taaaaacgag
     5881 ccgcccaaag ccatttatct agccgaactt cggcgtcgtt ttgttctttt tcgtgtttat
     5941 ttttcatttt ctgccttaaa atcaaaacaa tagtcgaaat attagagcga aagtgagatt
     6001 tttcaactaa aataactcaa aaaggtgaga taaaatgata aaacaacttc ctgaaatttt
     6061 gaacattaaa acagtagcga aatctcgcat ttttgaggtg caagcggtcg atttacgctt
     6121 ttctaatggc gaagagcgaa cttacgaacg acttacgccg aatcgccgtt cttcggtaat
     6181 ggtgattccg attcaaaaca acgagctgat ttttgtgaaa gagtatgcgg tcggctcgga
     6241 gcgttacgag ctgggttttc cgaaaggcat tgtggatgca ggtgaagagc cgattgagag
     6301 tgcgaaccgt gaattacaag aagaaattgg ttttggggcg aaaaaattag attttctgcg
     6361 gtcgctttac agttcgccaa gccatatgta cggcttaatg cacctgtttt tggcacaaga
     6421 tctgtaccca tcaaaattgg aaggcgatga gcctgaaccg ctggaaattg tgcgttatcc
     6481 gttggataaa attgatcaat tattggcaga tcctgatttt gccgaagcac ggaatttgtc
     6541 cgctctattt atgctacgag aatacttaaa aaaataggca aggagctatt atgcaaacgc
     6601 taactcaacc cctactcgag aatattatca atattgccaa agcagccggt gagcagttaa
     6661 agcagcttta tgcccgctcg gtggcaatta aaatcaaagc cgattgcaca ccggtgacgg
     6721 aagcggatct gattatcagc caatttttaa ctgaacgctt gaagcaactc acaccagata
     6781 ttccggtatt atcggaagag ttttgcgata ttccgtttgc cgaacgccaa caatggcaag
     6841 aatattggat tatcgacccg attgacggca cacaacagtt tattaaccgc accggtcaat
     6901 tttcagtggt gattgcgtta gtgcaaaaac gtgagggtag aaatcagccg gtgctgggcg
     6961 ttattcatgc tccgatatta ggaaaaacct attttagtat ggaaggtagc ggtagctttt
     7021 tgcaagaaaa tggagaaatt cgaccgcttg tcaaaccgaa acgtgcggag aatgcccttt
     7081 tgattgttac cgtaggcagc gatttacatg cagaacaagc taaaaatgcc atttcagccc
     7141 cacaaattga gtgtgtaaaa tatggttcgg gcagtctaaa agccggttta gtggcagaag
     7201 ggaaagccga ttgttatatc cgttttggtg acaccggcga atgggatact gctgtggcag
     7261 aagtgctgtt aagtgaaatg ggcggcaaaa ttttcgactt taatttttcg ccgctgactt
     7321 ataatcagcg agaaagtttg attaatcctt attttgtgat ggtggctgac ggctcgatag
     7381 attgggataa aatattttta ttcaaatagg tagttccgat tagcaatttt tatgataatc
     7441 ttgcacccaa caaaatttta acaattagca ataggataaa taaatgaatg ctgaaaatag
     7501 ctgtatcgtc atttttggtg cttccggtga cttaactttt cgtaaattaa ttcctgctct
     7561 ttataactta tataagattg gcagattggg cgagcatttt tccgtcctag gtgtttctcg
     7621 ttcagaatta accgacgaat ctttccgcca aaaaatgcgt gatgcgttag tcaaatttga
     7681 aaaagcaagc ggtgaagaat tagataaatt ttgcgaacat ctttattacc aagctgtaaa
     7741 tacctctgat gcagtggatt atgccaagtt gctgcctcgt cttgatgagc tacacgataa
     7801 atatcaaaca gccggtaaca cgctttatta cctctccacg ccaccaagtt tatatggcgt
     7861 gattccggaa tgtttagccg ctcacggctt aactaccgaa gagtttggct ggaaacggat
     7921 tattgttgaa aaaccattcg gctacgatat cgaaaccgcc aaaaaattag acgtacaaat
     7981 ccacaaatgc tttgaagagc atcaaatcta ccgtatcgac cactatttag gtaaagaaac
     8041 ggtacaaaac ttactcgttt tacgtttttc taacggctta tttgaaccgc tttggaaccg
     8101 taattttatt gattatgtgg aaattaccgg ggcagaatcc atcggcgttg aagatcgtgg
     8161 cggttactat gatggctcgg gggcaatgcg tgatatgttc caaaaccact tattgcaagt
     8221 attagccatg gttgcaatgg agccaccggc aattattaat gctaattcaa tgcgtgatga
     8281 agtcgcaaaa gtgctatatt gcttgcatcc gttaactgaa gaagacgtta aacacaatgt
     8341 ggtgttaggt cagtatgctc gtggcacggt agacggcaaa gaagtgccgg cttacttgga
     8401 agaaaaaggc gtgccggctg attccaacac tgaaaccttt atggcggtaa aatgtaaaat
     8461 cgataactgg cgttgggcag gtgtgccgtt ctatgtgcga accggtaaac gcttaccaac
     8521 ccgtgtgacg gaaatcgtaa ttcattttaa aactacacca cacccggtat ttagccaaaa
     8581 tgctccggaa aataaattga ttattcgtgt gcaaccggac gaaggcattt caatgcgttt
     8641 cggcttgaaa aaaccgggag caggctttga agcgaaagaa gtctcaatgg atttccgcta
     8701 ttctgattta agttcatcat caagcttact caccgcttat gaacgcttac tattagacgc
     8761 acttaaaggt gatgcaacct tatttgcccg tactgatgct gtacacgctt gttggaaatt
     8821 tgtgcaaccg attttagcct acaaagctaa tcgtgggcgt gtgtatgaat atgaatccgg
     8881 cacttggggg ccaaccgagg cagataaatt aatcgccaga cacggcaaag tatggcgaaa
     8941 accgtccggt acaatgaaga agaaagtgta aatttcagtt cccctcttta gcaaagaggg
     9001 gctaggggag atttggcaga agttatatac gctcatacga aatattgaaa tcgtaatcaa
     9061 atctccccct cccctctttt ctaaagaggg gtgatctaac gaggcaaatt atgaataaag
     9121 ttattttccc caccgcccaa gctgcggttg aacaaattgc taaagagttt attgaataca
     9181 gccatcaaaa ccgcccggtg catatttccc tttccggtgg ttcaaccccc aaattattat
     9241 tcaaaacctt agctcaagca ccgtttaata ccgaaattca atggcaaaac ctgcatttct
     9301 ggtgggggga tgatcgaatg gttgccccaa ccgatcccga aagtaactac ggcgaagtgc
     9361 agaaattact gttcgatcac atcgacattc caagcgaaaa tattcaccgc attcgtggtg
     9421 aagagaatgt agaacaagaa cttgcaagat tttcggcaga attgaccgct tgtgtgccga
     9481 acttggcgtt tgattggatt attttaggaa tgggaacaga cgggcatacc gcctcactgt
     9541 tcccacatca aacagatttt aatgatcaga acgttgccgt gatcgccaaa tacccagaaa
     9601 cagggcagat ccgcatttcc aaaacggcat ctttaattga aaaagccaaa cggatcactt
     9661 acttggtcac aggagcaagc aaagcggaaa ttttaaaaga aatccaaacc actccggcag
     9721 aaaatttacc ttatcctgcc gccaaaattc aggcggaaaa tggggtaacg gaatggtatt
     9781 tggatagtga ggcggctaac ttactctagg tcacaatcag tgacctttac aagcggttaa
     9841 attttagaaa aatgttgcaa agtatttttg tgatattcat cgaaaaagca gaaaaatctg
     9901 ctcgtggtat aggccaaaaa ttggcatagt ctttcttatt ttgagatcac aaaagtgatc
     9961 ttcactgaag aataaggaag aaagatgaat ccaattcaat taattgaacc aaacattaac
    10021 tctaaaattt ttactattcg tggcgagcaa gtaatgctag atgttcattt ggcagagctt
    10081 tatcaggtag atactcgaac ctttaaccaa gcagtaaaac ggaatgaaga gcgatttcct
    10141 gacatatttc gttttcaatt aacagaaaac gaatggctat ctttaagatc acaatttgtg
    10201 atcttaaacg aaaatagtgg gcgtggccaa cataggaaat atcttcctta tgtctttacc
    10261 gagcaaggca ttgcaatgct ttcggcagta ttgcgtagtg aagttgcggt gcaagttagc
    10321 attaagatta tgcaagcctt tgtgcaaatg cgtcatcttt tgcaaacaaa tagtggtttg
    10381 gtacaacgct tagaaagtgt agagcgtaaa cagttggaga tgtctgggca gttagagcag
    10441 gtgtttcaat ctcttgaagg caataagcct aaaatgcaag gggttttctt tgaaggtgaa
    10501 acctttaacg cttatcagtt tgttacggaa ttagtgagag gtgcaaaatc atcgctgatt
    10561 ttaattgata actatgtaga tgataccgtt ttaactttat ttacgaaacg atcgcataac
    10621 gtatcagtta cgatttatac gaaacaaata tctaagcaac ttgcattaga tttggaaaaa
    10681 tataacagcc aatatgctca cattaatgtg aaaatatttg ataaatctca cgagcgattt
    10741 ttgattattg atgaaaaaga gctttatcat atcggtgcat cacttaaaga tttaggtaag
    10801 aaatggttcg ctttttctaa aatggattta tcaatgagcc gcattttaga aaagttagcg
    10861 gaaaatcaat aaggtatatt aatgaaaaca ctcggcattt taggtggaat gagtgcggaa
    10921 agcacggttt cttattattt agatattaat cgctcggtga ataaagtatt aggtggaaat
    10981 agcagtgcca agattttaat ttcgagtgtc aattttgaag agattgtaca atgccaaaag
    11041 cagggaaatt ggcaagcagc cgctgaaatt ttatctgaac aagctagatt gctagaacaa
    11101 gccggagcag aaggcatttt attggcaacc aacacaatgc acaaaattgc cgatcaaatt
    11161 agtagccata tctctgtgcc gtttttgcat attttggact gtgtggctga ggcgatttca
    11221 gctcaaggtc tgcagaaagt agcactcctt ggcacaaaat ttactatgag tgataatttt
    11281 tacaaagacg gtttattgga gcgtggtatc acatcaatag taccagatga ggaaacgcaa
    11341 caagaaattc atcgcattat tttcgaggaa ctctgtttag gcaagattac tgaaagtgcc
    11401 aaagcgtttt atcttcagac tattcaacaa cttagtgaac aaggtgcaga aggtgtgatt
    11461 ttaggttgta ccgaaatcgg gttgctgatt aaccaaaacg acaatccgtt accgtttttc
    11521 gatacagcag cattacacag ccaaatggcg gtggagttta ttttaggtta ataaatgtta
    11581 caagcggtca aatttgcaaa aaattttacc aattcgaccg cttgcataga atcaaaaaca
    11641 ataggagcaa acaatgtcac aaaaaggcga tatcggcgtg attggactcg ccgtaatggg
    11701 tcaaaattta attttgaata tgaatgacaa cggctttaaa gtggtggcgt acaaccgcac
    11761 tacttcaaaa gtggatgagt tcttagaagg tgcggcgaaa ggcacgaaca ttatcggtgc
    11821 ttactcgtta gaagatttag cggcgaagtt ggaaaaaccg cgtaaagtga tgctaatggt
    11881 gcgtgccggt gaggtggtgg atcagtttat cgaggctctt ctgccacatt tagaagaagg
    11941 cgacatcatc attgatggcg gtaactcaaa ctatccggac accaaccgcc gtgtgaaagc
    12001 gttagcggaa aaaggcattc gctttatcgg ctcaggtgta tcgggcggcg aagagggtgc
    12061 tcgtcacggg ccgtcaatta tgccgggcgg tgatgaatct gcgtggcaat atgtgaagcc
    12121 gattttccaa gcaatttcag ccaaaaccga caaaggtgag ccttgttgtg actgggttgg
    12181 tcgtgacgga gcagggcatt ttgtgaaaat ggttcacaac ggtatcgaat atggcgatat
    12241 gcagttaatt tgtgaagcct accaattctt aaaagatggt ttaggtttaa gctatgatga
    12301 aatgcacgaa atctttaaag agtggaaaaa caccgaatta gacagctatt tggtggatat
    12361 taccactgat attcttgcct acaaagacga agacggcgag ccattggtag agaaaattct
    12421 cgacaccgca ggtcaaaaag gaacgggtaa atggactggt attaacgccc ttgatttcgg
    12481 cattccatta acactgatta ccgagtcggt attcgcccgt tgcgtatctg cgtttaaaga
    12541 tcaacgtgtt gcggcttcaa gattgtttaa caaagaaatt ggtaaagttg aaggcgacaa
    12601 aaaagtatgg gtagaagcgg tacgccgtgc gttacttgct tccaaaatca tctcttatgc
    12661 acaaggcttt atgttgattc gtgaggcttc tgagcaattc ggttgggaca tcaactacgg
    12721 caataccgcc ctattatggc gtgaaggttg tattatccgc agccgtttct taggcaacat
    12781 tcgtgatgcg tatgaagcca acccatattt agtgttctta ggctcagacc catacttcaa
    12841 agatattttg gaaaactgct tggcagattg gcgtaaagta gtggcaaaat cggtggaaat
    12901 cggtttacct gtaccttgta tggcgtcagc cattaccttc ttagatggct acacctcggc
    12961 acgtttaccg gcaaacttac tccaagcaca acgtgactac tttggtgctc atacttatga
    13021 gcgtacagac aaagctcgcg gtgagttctt ccacaccaac tggacaggac gtggcggtaa
    13081 taccgcatcg accacttatg atgtgtaatt aatctttttg agccacttaa ttcgatatta
    13141 agtggctttt ttattggatt tttcttcaaa atatcttgga gtgaatgttt acaagtttgt
    13201 ataataatgg agcgattttt catttatatt taaggagaac ctatgcttac cgatcaagat
    13261 atttttaatc gctaccaaac aaaaaaatca gaatttgaaa aacaggcaga tatttccctt
    13321 attgggcatt ccctgtttga tatgtggggc gatatggaaa acggcacgcc gaatttagca
    13381 ggaaaaacag ttgccaattt gggcttatca ggcaccagca cccgccaata tttggatgtg
    13441 attacccgac aagagcgaat tcaacacgtt ggcgataatg tatttatttt tctaggcgtt
    13501 aatgacattg taaaagagcc ggattactcg ccaaaacaag tgttagagtg gattggcgaa
    13561 attgtggatt ctcttcgcaa aattaatcca aatgccaact tttttctatt ggaagccaca
    13621 ccggttaata atattaccac caccaataat gctgcaataa aagagctcaa tgcgtatttt
    13681 gaggcaaata ttccatctga tttgacttat gtaaaaacgt gggaatattt tgctgacaaa
    13741 gaagggaatt tagatctaac tttatgccac gatggattac acttcaccca agcaggctat
    13801 gaccgcctag aggcgatttt aaccaaacat ttataatgaa aagcttcaat aagcaagcgg
    13861 tctgaattag caaaaaattt ccaaatcctg accgcttgtt agttaattac agtgcttcaa
    13921 tctcttgata ctgcacctgc aatttctcta atccactcag gtactcttgc attttttcac
    13981 gctctttggc gatgacttgc tctggggctt tggcgacaaa ggcttcgttt gaaagtttgc
    14041 cttcaatgcg agccacttca cctttaagtt tatccatctc tttggtgagg cgagctagct
    14101 cagcttcttt gttgataaag cctgccattg ggatcaagat ctcaccattt gcgaccagtt
    14161 tcgctaccga tagcggtgca ttttcaccat tttccagcac tttcacgcta tcaagttttg
    14221 ccatcgattt gagcaacact tcgttagcgt tgagaataga gacttcgtcc gcagagaaat
    14281 tacgagcgat taaatctaaa cctttgcttg gtgcgatgtt gctttccgca cgaatgttac
    14341 gcaccgccac aatcacttct ttgataaagt tgatttgact ttcggcggtt tcatcaatgg
    14401 caagcgggtc aaattgtggg aatttttgca acataatggt atcggcttca atacctacaa
    14461 agcctttcac tttctgccag atttcttcgg tgatgaacgg cattactggg tggattaaac
    14521 gcaggagttt ttccaataca ttcaccagcg tgcgacttgc gccacggcgt tgtacatctg
    14581 tgcctttgaa gaaaataggt ttggtcagct ctaaatacca gtcgcagaat tgatcccaag
    14641 taaattcgta gatcgcattt gccactaagt cgaaacggta ttggctgagt gcggtgcgga
    14701 aagtttccac cgtgcggttg aattggcttt caatccaacg atcggcaagg ctaaattcca
    14761 cgtcgccttc gcttaaatcc aacttgtcat tggtcagcac ataacggctc gcattccaca
    14821 gtttgttgca gaagttgcgg tagccttcta aacgtttcat atcccagttg atgtctcgac
    14881 cgttgctggc aagggcggtg agggtgaaac gcagagcgtc tgtgccgtgt gccacaatcc
    14941 cttcggcaaa ttctttgcgg gttgccttag cgattttttc tgccagttgt ggctgcatca
    15001 tattacctgt acgtttttcg agcaaatcgt cgagactgat gccgtcaatc atatcaatcg
    15061 ggtctaacac gttccctttc gatttcgaca ttttctgccc ttgctcgtca cggatcaagc
    15121 ctgttacata cacggttttg aacggcactt gcggtttgcc gttttcatct ttgatgaagt
    15181 gcatcgtgaa cataatcata cgagccaccc agaagaagat gatgtcaaaa ccggtaatca
    15241 gcacatcggt cgggtggaac attttcagtt ctttggtttg ttctggccag cctaacgttg
    15301 agaacgtcca tagaccagac gagaaccaag tatccagtac gtcttcatct tgctttaatg
    15361 gtaagtccgc aggtaagttg tgtttcgcac gcacttccgc ttcatctcgt gctacataaa
    15421 cattgccctg ctcgtcatac cacgctggaa tgcggtgtcc ccaccataat tggcgagaga
    15481 tacaccagtc ttgaatatca cgcatccaag agaaatacag gttttcgtac tgtttcggca
    15541 cgaattggat ttcgccgtct tccaccgctt tggtcgcgac ttccgccaaa ggtttgacag
    15601 acacatacca ttggtcggtc agcatcggct caatcggcac gccaccacgg tcgccatacg
    15661 gcacttttaa gtcgtgtggt ttgatttgat ctaacagccc aagagcttca aaatctgcca
    15721 caattttctt acgcgcggca aaacgctcta agccttgata gtcggcagga attggggcgg
    15781 tgtagtcgga aagcggttta ccgtctgtgc cgataatttc ggcctctgca cgaatatcgg
    15841 catttaaggt catcacattc accatcggca agccgtggcg tttgcccact tcgtagtcgt
    15901 tgaaatcgtg ggcaggggtg atttttacca cgcccgtacc gaactcacga tccacatact
    15961 catcggcaat aatcgggatt tcacggttgg caagcggtag gattacgctt ttgccaatca
    16021 gagcttgata acgctcatct tcagggtgaa ccgccaccgc agtatcgccc aacatcgttt
    16081 caggacgggt cgttgccacc actaagtaat ccaagccgtc tgcggttttt gcaccattag
    16141 ccagcggata gcggaaatgc cacagcgagc ctttgctttc tttgttttcc acttccaagt
    16201 cagaaatcgc agtatgcagt ttcggatccc agtttacgag gcgtttgcca cggtaaatca
    16261 agccttcttc gtgcaagcga acgaacacct cttttaccgc attggataag ccttcgtcca
    16321 tcgtaaaacg ctcacgatcc cagtcaatcg agttgcctaa gcgacgcatt tgctggctga
    16381 tcgtgccgcc cgaataggct ttccaatccc agattttgtt gataaaggct tcacgcccat
    16441 aatcgtggcg ggttttacct tcttccgctg cgattttacg ctccaccacc atctgagtgg
    16501 caatccctgc gtggtcagtt cctgtttgcc aaagggtatt gttgccctcc atacggttaa
    16561 aacgaatcag cgtatccatc aaggtttgct ggaaagcgtg ccccatatgc aaactccccg
    16621 tcacattcgg cggcggaata gcgatacagt agctcggtgc attaatatct tcactcggct
    16681 taaaatagcc ttgcgattcc cagtgttggt agagcgcttg ctctacagcg gaagggttaa
    16741 aacggtcttc cattgtgaat tgttttgtca ttggttttgt tttctcttgt ttaataattt
    16801 tttcactagc ttaatcttat aaaaaagatc tttgccgtaa atgcttttat aggtaattag
    16861 ttatttaaat taaggtcaac taaaagatta attgggaatt ttttgttcct cttgcatttt
    16921 tcttcgtttt tcccataatt gctttcggct atttaaacag ctttgctcaa tctctttaat
    16981 atcatcttct atattggatg aaaaattgat taatttgatt gtcggaggaa atataccggt
    17041 tttatcttct tgcgtagtta atgttagtgt tcctagatta ctgttaattt ctttaatttt
    17101 aaatgttgat agctcggtat atcccccact aacaagataa ctcaatttca actctctatc
    17161 gaaaataaga tttaataatg ttggcttagg gctttccaat ctaaaactcc aagttagagg
    17221 tattaactca cacagagctg ttgaagtcat ttcccctaaa atcgaattgt catctttatt
    17281 aaccataaat tcaatgataa catttggttg ctcttcaggt atgttcaata atttatagtc
    17341 gataatgtaa tttgtatttg tagaccataa accatccagt tttttattat ataggtaatt
    17401 ctcctcgaaa tttttccaaa taataggcat gtttgcgatg cgttctaaaa tatcagttgt
    17461 gaagatactc catatggcag atataagaat aataggaatt ttgttatttt ttatgaactg
    17521 ttttaagcca ttctcttttt tatgagtacc aataactttt ttagactttt tcctattctg
    17581 tttcatcttt gtgtttttgt tccaatatcc ccgatggtga tcgtcttcga cgagagctta
    17641 tttatttaag aacctatcag agataggcat aagcggtctg tttcgagaag ttttttgcaa
    17701 agtttttctt taatccgaca gcttgtcacc cacacacaag ccgtgtgggg ttacgcatag
    17761 ctgagccact ttgtggctct aagttacagc tccaaaggag ctgggattgt cgagcctagc
    17821 acggctcgtg ctaggtggtt ttaaacccta attccactaa ttcatcacaa agctgattac
    17881 accaattcgg tattttgtct gaaattttta tcactttctt atcagcaatc tgcaaaatca
    17941 aattcggctt ggtttctgaa ttatcataaa tcagtgtttc atcattgata aaaatcgctt
    18001 caattaaatt ttcacggcta atgtgatagc gttttctaat ggtttcttca tcaataaaat
    18061 gtccgccggc tttcactctt gcttttaccc gtgcgatgtt aattttatag ctatcgacac
    18121 caatataatt taatcgagtt ttgaaatatc ctgctttggc attttccatt cgttttagaa
    18181 tagatttacc cgagagggtt gattccattg aaaatgcaac ctgatttttt actgcaaact
    18241 gaaatagttc gattgctttt ctgcccgcct caatatcggc caatcttgga ttgagtgggt
    18301 taatctgcat cgcaatatta tcggaatcaa tcacaatctc gactttatct tgattgaaag
    18361 aacgtaaagt agatttgccg gctccgtttg tgccacagta aaaaattgct aggttattgt
    18421 gcatattcaa tcactttttc cgtaccgtcc ggataatgct gaattaaatc cccattttct
    18481 cggcgatacg tcagcacttc gtgctttttc ttttcttcaa accatgctgt aaagagaata
    18541 tccagttcac gttgtttttt cagtaattct tcacgacttg tcattttatg tcctctgttt
    18601 cagaatcgcc aaataccttt ccaactcagc taattcatac tgactaatca attcaaccaa
    18661 actactaata tcttgttgat ttttatggaa atcatcaaaa cattggtaat attgggctcg
    18721 attggtaaat ttaatatcaa tcggtaaata gccctgtttt aataattcaa aattaatcag
    18781 taatcgccct gtgagcccgt ttccatcaat aaaagggtga atgctttcaa aggctaaatg
    18841 cagccaactg attgcctcta tgggatgaag tgcggtcagt ttttgttgat atttttcaat
    18901 caataattgc atttcttcgg caattaaata aggggggggg cattttctgc ccctaaaatt
    18961 cgtactggaa ttttgcgata aacccctcgg ctttccgcat tgcccattaa taccagagaa
    19021 tgaatatctt taatcgctcg ttcgcttaat ggttctttat tggcgactaa ttcataaata
    19081 tagttgaatg catccttaaa accgataata tctaaatgct cccgaatcgg tttttcggca
    19141 atggtcattc cctcttttaa aatgagcacc gtttcacgca aagtaatggt attgccttca
    19201 attgcattgg aattatagct gctttcaata ataaactctt cccgcagtcg ttgaacttcg
    19261 ctttcagata atggacggcg ttgtgaaagt gctgttttta attgttcgat tttagctaat
    19321 ttattcattc taacaccata tccaaatgcg caatcccatc ttccaaatac acttctgaaa
    19381 ccgctttaaa cccaaaactt tcataaaacc cttgcaggta actttgggct tgggcgtgaa
    19441 tgggttgagc aggaaaatgt tcgccacaat aatccatcgc tttttgtacc aattcccttg
    19501 ctaagcctga gccacgattt tctttcacca ccaacactct acctatatgc acaccatcat
    19561 tggctggaat taaacggcag taagcggtca gattttttgc attttttgta aagaaatgca
    19621 ccgcttgcag gtctttatta tcgacttctt ggtaagggca gttttgctca accacaaaca
    19681 ccgctgtacg tgcgtggtaa atctcaaaca actcttgggt ggagagttca tcaaagcgtt
    19741 ttgcgcgcca agagaggttt tttagcattg tatcgtttcc agttgccaac caagttggcg
    19801 gtattgttta tagcggtcac gagcctgtgc tttggcggtt tcttccaccg gcacgaaatc
    19861 aataatctgg gtaaaactgc cgataaattc ggggagttgg gtttggagtg aaatcaacaa
    19921 atcccgacgt tgagcattgc gtttaccttt ccacgaaatt tcgataggcg ttgggtaagt
    19981 ggtgatttct cccgataaat tgtgcggcac gaacgaatcc ggatctcttg cccaaagtgc
    20041 ttcgtcaata tttaacgctt gttgctcggt ttcgcatgca atcagtaccc gtttacctaa
    20101 tcgccacgct tgagccgcaa gttcgcaggc ttgcatttca gcagcggaaa gctcggctgc
    20161 atcggcttgg cttaatagat aaaattgtac ttgtttcaca gaatgttccc agaaattcaa
    20221 tcagatattt aaacttaata ttctagctga aaatgagtaa aatataaaat ctaagcgttt
    20281 gtttttgcaa aaaattgaga aaaaatgacc acttgtgttg cgttgccttg aggaactaat
    20341 tagcttttag acgttctaag agaacaatgc actatttcaa tagttggaaa ttgtgtagaa
    20401 tacccacttc atttagctat tttataagga acttactatg ggcttatttg attttgttgg
    20461 cgacattggt cgtaaattat ttaataaaga agaagatgct tcaaaagcgg ttacagagca
    20521 tttggcggaa gacaatccgg gcgttgaaaa tgtaaacgta acggttgaaa acggggtagc
    20581 gaaaatttca ggcattgctt caaccgcagc agctgttgag aaagcggtat tgatggcggg
    20641 taatgtggct ggtatcactg aggtaaatat tgatgaagtg accttgcctg atgacgtgca
    20701 acttgcaagt gatgatgagc tttatgttat ccaaaaaggg gatacgttgt gggaaatcgc
    20761 cacaaaagct tatggtaacg gtgcaaaata taaagcgatt gtagaagcaa ataaagaagt
    20821 tattaaagac gaaaataaaa tcttcccagg gcaaaaaatt cgtatcccga aaggtttata
    20881 atcaaattga aagagctaag ctggtcgaaa gtttagctct ttttgtaggt ggtgttagac
    20941 tgaaaatgga tattgaatgg cagggtggta ttcataacct tcaactttga aatcatctaa
    21001 gctcacccaa gtttctaaat cttctaagga ttttatatca ggattaatga ttaatttagg
    21061 tgcattgagt ggttctcgct taagttgaac atcacgcatt aattctagtt gatcttcata
    21121 aatatgcgca ttgacaattt tatggaacgc ttgtcctgcc ttatgccctg taatttgagc
    21181 cattaaagct aaaaaggtat agcattgaat catattccaa tttaacccaa gcggtacatc
    21241 tgccgaacgc tgagtactat tcaggtaaag cgtgccatca agtagagaaa aatgatggct
    21301 gtgtaaacaa ggacgtaagc agcccatatg gaaagcgccg gggtggtaga aggtataaat
    21361 ttcaccacgg ttatcaattc cttttttcaa atcgtccaca atttgtcgca ataaatcgac
    21421 tgagccaccg tctggtttcg ggaaattacg ccctactgcg ccgtaaacca agcccatatc
    21481 atcttcccct tttcgatagg gattagcaag ccattgtgca ttttcatttg cattagcgtc
    21541 ccacgatttt gtgcctaatt gacggaaatc agcagcatta ctatagcctc gaatatagcc
    21601 taaaagttcg gcaatcgcag ctttccaata actacggcga gtggtaacta aaggaaattc
    21661 tcctttttct acgtcataag ttaagtcagc attaatgact gtgaggcagt gtttgcctgt
    21721 acgttcattt gcaacccatt tgccttcgct aacgatgcgg ttacataagt ctaaatactg
    21781 tttcattatt tacctcataa aaaattttag gtaattttgc catttattcg gtaaaatagc
    21841 taaaacttta tgacacaaca caataaggag ttatggatat gaaaggtata atgaaatcca
    21901 ttctggtttt ttccaccgct gtttttttag cagcttgttc atcgaataaa agcggttgga
    21961 cacgtttaaa tgataatgat gttgatcaga aatcttatgc tattgcttat ggtgcaacgg
    22021 ctcagactta tgcggataga gtaaatgaaa gctatgatat caattccttt atgaatgggg
    22081 taaatgattg gtacactaaa aaggttacat tgccaattga gcaaattaga gcaataacga
    22141 ttaatcgaat gttagaccat aatgtgtatg cttattatag tggtgtgatt tatgccgcag
    22201 atttgcaggc aaatttcaat catttagatc ctaattgttg ggggcttgtt caaccagcga
    22261 gtatgaccca gggcattcac gatgcgatgt tagatttaca gaagaacaaa gttcgtggag
    22321 atgagtatat caaaaatggg gttgagcaaa tattgcacct ttgtgtaaaa acgattgctg
    22381 aagatgaaaa tgaatcgcaa tctaaaggta aaaccaaaaa gcataaataa gttaagctat
    22441 gacaagcggt aaaattttta aaaaatttta ccgctttttt ataaccgtat gaaatgttta
    22501 atatttattc tatgaaactt aaaaaaacag cgttttgttt attcaatagg caaacactcg
    22561 ggatttttca attttcagga aaaagaattt gacatctttt taaattctag taatatggcg
    22621 cccacagaca cagtgagtgg tgagatggcc gagcaggctg aaggcgctcc cctgctaagg
    22681 gagtataggg ttaaaaagct ctatcgaggg ttcgaatccc tctctcaccg ccatttactt
    22741 tatcacgcac ccgtagctca gctggataga gtactcggct acgaaccgag cggtcagagg
    22801 ttcgaatcct ct
//
LOCUS       DANLXO010000029        22677 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.029, whole genome shotgun sequence.
ACCESSION   DANLXO010000029 DANLXO010000000
VERSION     DANLXO010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22677
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.029"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(130..1533)
                     /locus_tag="PXD69_000991"
     CDS             complement(130..1533)
                     /locus_tag="PXD69_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDL6283203.1"
                     /translation="MLTYTFNTQEGTALYEQLYRFLKNDIESNILIAGDKLPSKRAFA
                     KHLGISVMTVETAYQQLVAEGYVNTQPKKGFFVNALNLPEKKEAISVQLQKISSEQYE
                     KNKKWQADLTNRQTLAENFPFSVWTKLVREVLKTHQSELMERAESGGVWTLKFAIANH
                     LRAFRGMIVNPTQIIIGAGTEYLYGLLIQLLGLDKHYALTEPSYDKLRRIYHSYRLST
                     ATVSMPFSIDELNSKNVDVIHTSPSHHFPTGHVMPIAKRYELLAWVAQKAERYIVEDD
                     YDSEFRFVGQPIPALKSIDMLGRVIYMNTFSKTLSSTVRIAYMVLPPELLNRFQQELG
                     FYASTVSNFEQYILAEFIQQGYFEKHINRMRAYYQKKRDKLLKAFKQGNLAEKIAIKE
                     EHSGLHFIVQLNTTLTERQILQAAEEQGIKFVALSAYYQDKSQIQQNAFIIGYSNLKD
                     DQINYVAESLKKILDNE"
     gene            1744..2616
                     /gene="pdxS"
                     /locus_tag="PXD69_000992"
     CDS             1744..2616
                     /gene="pdxS"
                     /locus_tag="PXD69_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDL6283204.1"
                     /translation="MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALE
                     RIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKVRIGHVTEAQILQAIEIDYIDES
                     EVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
                     HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGVATPAD
                     AALMMQLGAEGVFVGSGIFKSGDPAKRARAIVQAVTNYNDPKLLAELSEDLGEAMVGI
                     NEQEIELLMAARGV"
     gene            2616..3188
                     /gene="pdxT"
                     /locus_tag="PXD69_000993"
     CDS             2616..3188
                     /gene="pdxT"
                     /locus_tag="PXD69_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDL6283205.1"
                     /translation="MKIAILALQGAFSEHTDKLQQLGVESMEIRQLADLNQDFDGLIL
                     PGGESTVQGKLLRELGLLEPLRQKILNGLPTLGTCAGLILLAENLVNDDKKHLATLPV
                     TVKRNAYGRQLGSFLVEEEVKYLGKIPLTFIRAPYIESTGKDVEILAKISGKIVGVKY
                     QNQIGISFHPEVNNDLSFHRYFVEMCRKNK"
     gene            3337..4287
                     /gene="tal"
                     /locus_tag="PXD69_000994"
     CDS             3337..4287
                     /gene="tal"
                     /locus_tag="PXD69_000994"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDL6283206.1"
                     /translation="MSQLDTLSKMTVIVADTGDIEAIKLYKPKDATTNPSLILSASAL
                     PQYAPLIEEAINYAKAQSSDKDQQLVDAEDKLAVNIGLEILKLVPGRISTEVDARFSY
                     DTEKTIAKARKLIGLYNDAGISNDRILIKIASTWQGIKAAEQLEKEGINCNLTLLFSQ
                     AQARACAEAGVYLISPFVGRILDWYKAHEGKEYAPAEDPGVISVTNIYNYYKQHGYDT
                     IVMGASFRNVGEIIELAGCDRLTISPPLLKELQESDEKLVCKLDYKGEIKPRPEKMTE
                     AEFYWEHNQEPMAVEKLAEGIRKFAIDQEKLEAMLAEKLQ"
     gene            complement(4349..4622)
                     /locus_tag="PXD69_000995"
                     /pseudo
     CDS             complement(4349..4622)
                     /locus_tag="PXD69_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
     gene            complement(4653..5117)
                     /locus_tag="PXD69_000996"
     CDS             complement(4653..5117)
                     /locus_tag="PXD69_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL6283207.1"
                     /translation="MKKLALAVALMSSFALVGCANTDVFSGSVYSGEQAKEARSIAYG
                     TIVSVRDVKIQARSEGVIGTVGGGVLGGVAGNAIGGGTGQAIATAVGAVAGAVIGNQV
                     EQKASQVSSLEMVIRKDDGKEIVVVQKKEDGFVPGKRVRIVGSNSDLNVSLL"
     gene            complement(5138..5737)
                     /locus_tag="PXD69_000997"
     CDS             complement(5138..5737)
                     /locus_tag="PXD69_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL6283208.1"
                     /translation="MDKIIAENAKFFEKMTACFGDLSQFEQKIRQIAEIAGIDLAAYE
                     IDHLAVRMNQTETAEQWKILLLDGATLLKESEVNGRPIGLFALIQAVEFCGQFVKIVE
                     LPFPKNKVYLEEGWEHIELVFPMLDNESSEQWVSRALSHFRLADNSEIKLKISQPQVE
                     GERLPNPSIAISLRNVTFCNPYCLKLHPYDIKSVIMSEN"
     gene            5771..7498
                     /gene="argS"
                     /locus_tag="PXD69_000998"
     CDS             5771..7498
                     /gene="argS"
                     /locus_tag="PXD69_000998"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDL6283209.1"
                     /translation="MNIQQILSDKIKQAMVASGADSNVEPLVRQSGKPEFGDYQANGA
                     MGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENTNSSLQA
                     VNFGIKTANPQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVIRANHVG
                     DWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKEHYDSDEAFAEKARNYVVKLQ
                     SGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG
                     LAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRAL
                     VFSDSRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFKTRSGGTVKLKD
                     LLDEAVERADKLIAERSTELTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML
                     TFEGNTAPYMQYAYTRIRSIFARANIDENALSGSIQLNEPKERALAVKLLQFEEALNG
                     VAKEGMPHILCQYLYELAGSFSSFYEACPILNAEETTKNSRLKLAALTAKTLKQGLDL
                     LGIKTVEKM"
     gene            7688..8854
                     /gene="cgtA"
                     /locus_tag="PXD69_000999"
     CDS             7688..8854
                     /gene="cgtA"
                     /locus_tag="PXD69_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HDL6283210.1"
                     /translation="MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGD
                     VYLIADENLNTLIDYRFEKRYAAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQ
                     EIIGDLTRHGMKMLVAKGGYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLA
                     DVGMLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLI
                     EGAADGAGLGIRFLKHLERCRILIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEK
                     PIWLVFNKIDTIGEEEAAERAKDIAEQIGWEGDYYLISAATGQNVQALTRDIMDFIEA
                     NPREVEEENKAPEEVKFKWEDYHNEAMQNAVEEDWDDDWSEEDDEGIEFIYERH"
     gene            8939..9556
                     /locus_tag="PXD69_001000"
     CDS             8939..9556
                     /locus_tag="PXD69_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HDL6283211.1"
                     /translation="MLSSTSCDLFNIPFFQFAQMKKYCPEEIPRIKAEYKTQWEIWKK
                     LHQEVSRQLGQPFAPPHIEKWCNGWQVRAHFFAYYKYEFNRNSAAILSVILNRRRLQV
                     SLDWHCYRADRSQINVHQYNQWWENLDREKFADFEIWHGSESEYDDFRTVSQMSEQAF
                     TLTNEEDFWCIGKNVEKDDLDNIDVVEFIYQTIRALLPLYEKCHQ"
     gene            complement(9603..11561)
                     /locus_tag="PXD69_001001"
     CDS             complement(9603..11561)
                     /locus_tag="PXD69_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HDL6283212.1"
                     /translation="MIAELGNYTLALALAISILLAVLPLWGAEKQNSTLIALARPMTW
                     AMFLALTVSFGSLFYLFAVNDFTVQYVVNNSNSRLPLQYRLSAVWGAHEGSLLLWVWL
                     LSLWSVGVATFTRKMPEDAVARVLGLMGVIGIGFLMFVIFTSNPFDRTFPNFPIDGKE
                     LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVF
                     LTLGIVLGSWWAYYELGWGGWWFWDPVENASLMPWLAGTALIHSLAVTEKRGTFKAWT
                     VLLAILAFSLCLVGTFLVRSGILVSVHAFASDPTRGLYILAYLVLVVGGSLLLYAFKG
                     SEIKSLDNYERYSRETMLLINNILLMAFLSVVFLGTLLPLIHKQIGLGTISIGAPFFD
                     QMFLILMVPFSFVLGIGPLVKWRRDQVSAIRKPVIIATILMALLGFGLPYLFRNTITV
                     SVVLGTMMSVFIVLLSLYELHQRATHRHSFLSGIFKLSRSHWGMVLAHLGVAMTVFGI
                     AFSQNFSIERDVRMNVGDKAEILDYQFEFKGIKITDGANYQGGTAELEITRNGKYEAT
                     LNAEKRFYTVSRMGMTEAAIDWGFTRDLYAALGEKLEDNSWAVRLYYKPFIRWIWIGG
                     LFMALGGLLCMLDKRYRLRIENKKEVIA"
     gene            complement(11558..12115)
                     /gene="ccmE"
                     /locus_tag="PXD69_001002"
     CDS             complement(11558..12115)
                     /gene="ccmE"
                     /locus_tag="PXD69_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HDL6283213.1"
                     /translation="MNPRRKSRLKVVVSILLGLSVAAGLTLYALSQNIDLFYTPSEIV
                     NGKNDDPKQKPEVGQRIRVGGMVVEDTVKRDDKSLKVVFDLNDIGPSITVEYEGILPD
                     LFREGQGIVAQGVLIEPTRLKATEVLAKHDENYMPPELGDKLKEQHKKSGVSEQDLKG
                     ESETDRKMKAEAEAEKANNVQGESK"
     gene            complement(12301..12498)
                     /gene="ccmD"
                     /locus_tag="PXD69_001003"
     CDS             complement(12301..12498)
                     /gene="ccmD"
                     /locus_tag="PXD69_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HDL6283214.1"
                     /translation="MTFQFESISDFFAMGGYGFYVWLSYGVSFIAMIGLIWLSRREQK
                     AILAQAKKEIVREEKLKQTSQ"
     gene            complement(12513..13250)
                     /locus_tag="PXD69_001004"
     CDS             complement(12513..13250)
                     /locus_tag="PXD69_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HDL6283215.1"
                     /translation="MWKWLHPYAKSETQYHLLGKIQPFLGWLSLIMLAAAFVWGLAFA
                     PKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAGLVALVWQIRQANLAMISMAPIGLV
                     FAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDRQTGAKAAA
                     VLSVVGVINLPIIHFSVEWWNTLHQGATITKFDKPSMAVEMLIPLLLAIFGSLIFTAW
                     FSIWRYRIALLKDERNRPWVKQLAKSV"
     gene            complement(13450..14112)
                     /gene="ccmB"
                     /locus_tag="PXD69_001005"
     CDS             complement(13450..14112)
                     /gene="ccmB"
                     /locus_tag="PXD69_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005565617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HDL6283216.1"
                     /translation="MILLTIIQRELTIAFRKPSEILNPLWFFLMVITVFPILMGPNPE
                     LLGKIAGGIAWVAALLSALLSFERLFRDDYLDGSLEQLMLLPLALPQVALAKVIAHWL
                     LTGLPLILLSPIAAILLSLETHVWWALVLTLLLGTPILSCLGAIGVALTVGLRKGGTL
                     LSLLILPLFLPVLIFAAAVLEAATLNMGYSGQLAIIGAILAVTLTFSPFAIAGALRIS
                     LN"
     gene            complement(14109..14750)
                     /gene="ccmA"
                     /locus_tag="PXD69_001006"
     CDS             complement(14109..14750)
                     /gene="ccmA"
                     /locus_tag="PXD69_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HDL6283217.1"
                     /translation="MNQTAQYQLKLNQIACERGETRLFEGCSFTVQSGEWVQIEGHNG
                     IGKTSLLRILAGLFLPAEGEVLWNDIAIQKQRDHYYSELFYLGHYSGVKPELTPWENL
                     RFYQKIQQLPQDDDALWHALTKVSLIGREDLPCSHLSAGQQRRVALAKLWLTNAKLWI
                     LDEPFTAIDKKGVADLIAHIEQHCEQGRLVIFTSHQAAESDKVRIISLDQFKV"
     gene            complement(14894..15604)
                     /gene="hda"
                     /locus_tag="PXD69_001007"
     CDS             complement(14894..15604)
                     /gene="hda"
                     /locus_tag="PXD69_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HDL6283218.1"
                     /translation="MQLPLPIHQIDEDTFDNFYSQNSEVLLGSLKRNFTDVQQPFFYI
                     WGGKSCGKSHLLKAVSNHFLLNNQTSSYIPLTKANYFSPLVLDNAELLNVICLDDIQA
                     IAGDAEWELAIFNLFNQIREQQGLFNEGQKTLLLISADCPPHQLNIQLPDLRSRLTWG
                     EVYQLNDLTDEQKCQILQLNAHQKGVELSDEVAHFLLKKAGTDLEQLSKILDKLDKAS
                     LQAQRKLTIPFVKEILSL"
     gene            15874..17475
                     /locus_tag="PXD69_001008"
     CDS             15874..17475
                     /locus_tag="PXD69_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6283219.1"
                     /translation="MKNMTKLSLITLALAASSSVFAAPKTFVYCLEASPSALSPVLST
                     DGASFDVNALPIYNKLTDFEDGTTNVIPSLAEKWDISEDGKTYTFHLRKGVKFHDNKE
                     FKPSRELNADDVVFSINRQFDPNHPFHKVSGGNYEYFIGMDMQNIIDKVEKVDDHTVK
                     ISLKVPNAPFLANLAMDFNAVYSAEYAEQSLKAGKPERIDTNPIGSGPFQFVDYQKDA
                     TVRYKAFENYWQGTAKIDRLVFAITPDASVRLAKLQKGECHAMPYPNPADIEDLKKDP
                     NIELMSQSGMNIGYLALNSSIKPLDNQKVRQALNHAVNKQAIVDAVYQGAGQVAKNPI
                     PPTMWSYNEAVQDYDYNPEKAKALLKEAGFENGFDTELWAMPVSRPYNPNARRMAELI
                     QEDWKKVGVNAKIVSYEWGEYLKRLRQGEAATSMIGWTGDNGDPDNFLNTLLSCSAVE
                     AGSNYAKFCHKPFEEVVLGAAQESDKAKRTELYKQAQVIFKEQAPWITIAHSTVYFPV
                     RKEVKGYVMSPFSLHNFYKVDLADK"
     gene            17747..18751
                     /locus_tag="PXD69_001009"
     CDS             17747..18751
                     /locus_tag="PXD69_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6283220.1"
                     /translation="MFSFILKRVLMVIPTFIAITLITFALVHFIPGDPIEIRMGERGL
                     SPEVHQQMMEQLGLNRPLFEQYISYIKGVLHGDLGNSFRNNEPVLKEFFTLFPATVEL
                     AFFALLWSLIFGIILGVIAAVKKESWISHTVTTLSLTGYSMPIFWWGLILILYFSTPL
                     GLPASGRLPSEYWIEAETGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVVTR
                     MTRSSMLEVLGEDYIRTAKAKGLNTTRIVIVHALRNALIPVVTVVGLIVGQLLSGAVL
                     TENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATIIILVNLTVDLLYGIVNPRIRHS
                     "
     gene            18853..19746
                     /locus_tag="PXD69_001010"
     CDS             18853..19746
                     /locus_tag="PXD69_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL6283221.1"
                     /translation="MSGITAVNPPAPKTPLQEFWYYFCQNRGALIGLTFIAIVFVACV
                     FAPWVAPFDPIEQNRSALLLPPAWLEGGNSAHLLGTDDIGRDILSRIIYGSRLSVFIG
                     LVIVLLSCVFGVILGLLAGYYGGTLDIIIMRFVDIMLAIPSLLLTIGVVTILGPSLIN
                     AAIAIAIVSIPSYVRLTRASVLSEKNRDYVTASRVAGASVLRLMFVVILPNCLAPLIV
                     QMTMGISNAILELAALGFLGIGAQPPTPELGTMLAESRGFMQSANWLVTIPGLAILSL
                     VLAFNLMGDGLRDALDPKLKQ"
     gene            19757..20746
                     /gene="dppD"
                     /locus_tag="PXD69_001011"
     CDS             19757..20746
                     /gene="dppD"
                     /locus_tag="PXD69_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDL6283222.1"
                     /translation="MALLTVDQLSVHFGETKTPFKAVDRISYEVNEGEVLGIVGESGS
                     GKSVSSLAIMGLIDFPGRVMAEKLYFNGNDLLALKPKEKQQIVGADVSMIFQDAMTSL
                     NPSYTVGYQIMEALKVHQGGSKASRRERAIELLTMVGIPDPESRLEVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVA
                     ESAHRIIVMYAGQVVEEGKAEQIFKAPLHPYTQALLKALPEFAEGKSRLQSLPGVVPG
                     KYDRPQGCLLNPRCPYATEKCRTIEPAMQIINGRQVKCHTPLNAQGEPIRIAV"
     gene            20874..21863
                     /locus_tag="PXD69_001012"
     CDS             20874..21863
                     /locus_tag="PXD69_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283223.1"
                     /translation="MKENNSLPPFLKAVDLKKYYPVKKGMFAKPKTVKALDGVSFTLE
                     RGKTLAIVGESGCGKSTLGRMLTMIESPTEGELFYNGQNFLVNDKETAQLRRKKIQIV
                     FQNPYSSLNPRKKVGSILEEPLLINTNLSAKERKEKVLEMMAKVGLKPEFYDRYPHMF
                     SGGQRQRIAIARGLMLQPDIVVADEPVSALDVSVRAQVLNLMMDLQEEMGLSYVFISH
                     DLSVVEHIADEVMVMYLGRCVEQGDTKTIFSNPRHPYTQALLSATPRLNPEQRRERIK
                     LTGELPSPLNPPKGCAFNARCRFATDRCYVERPELKTYQDGTRIACFVVEENN"
     gene            complement(22097..22669)
                     /locus_tag="PXD69_001013"
     CDS             complement(22097..22669)
                     /locus_tag="PXD69_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL6283224.1"
                     /translation="MIHNKISLDISSEQLADIRQQMLKFAQLQLQDIALAEDMVQEAF
                     VNAIKNIDNFQRKAALKTWIFAILKNKIIDYLRKKDRIVLESDLADDDEENHFFDNYG
                     HWKEEYYPSSWQEEAVYSKEFWILFEVCLSNLPAKQARVFMMREYLEATSDEICRVVN
                     ITSDNLYTLIYRARLQLQQCLSRKLTERNR"
BASE COUNT         6867 a         4835 c         4657 g         6318 t
ORIGIN      
        1 atgcattata cgcaaaacaa aatgccttgc aaggagaatt tggtaatttt ttgcaaaaat
       61 cactaaaata attaccactt gcgtgttttt aaggcaattt gctaaaaatt aaagcagttt
      121 tgatacttgc tattcgttgt ctaaaatttt tttcaggctc tctgctacat aattaatctg
      181 atcatctttt aaattagagt acccaattat aaaagcattt tgctgaattt gagatttatc
      241 ttgataataa gcagacaatg cgacaaattt tataccttgt tcttctgctg cctgcaaaat
      301 ttgcctttct gttaatgttg tgtttagctg tacaatgaaa tgcaagcctg aatgttcttc
      361 ttttattgca atcttttctg ctaaattgcc ttgcttgaaa gcttttagta atttatccct
      421 ctttttttga taatacgctc gcattcgatt gatatgcttt tcaaaatagc cttgttgaat
      481 aaattctgcc aaaatatatt gctcaaaatt ggaaacggta gaagcataaa accctaattc
      541 ctgctgaaaa cgattcagta attctggtgg caaaaccata taggcaattc gtacagttga
      601 agagagcgtt ttagaaaaag tattcatata gataactcgc ccgagcatat caatagattt
      661 caatgcagga attggttgtc ctacaaaacg aaattcgctg tcgtagtcgt cttctacaat
      721 atatctttca gctttttgtg caacccaagc taacaactca taacgtttgg caatcggcat
      781 tacgtgtcct gtcggaaaat ggtgtgatgg cgaggtatgt atcacgtcca cattctttga
      841 atttaactca tcgattgaaa atggcatcga tactgtggct gttgataagc gataactgtg
      901 ataaattctg cgcaatttat cgtaactggg ctcagttagt gcataatgtt tatctaagcc
      961 tagaagctga atgagcaaac cgtaaagata ctccgtaccc gctccaataa taatctgtgt
     1021 tggattaacg atcattcctc taaaggctcg aagatgattg gctatcgcaa attttaatgt
     1081 ccatacgccc ccactctcag cacgctccat tagctcactt tggtgtgttt tcagcacttc
     1141 gcgtactaat tttgtccaaa ccgaaaacgg aaaattttct gctaaagtct gtcgattagt
     1201 taaatctgcc tgccattttt tatttttctc atactgttct gaactgattt tttgtagctg
     1261 aactgatatg gcttcctttt tttctggtaa atttaaagca ttcacaaaaa agcctttttt
     1321 aggctgagta ttcacataac cttctgctac taactgttgg taagctgttt ccactgtcat
     1381 tactgaaatg cctaaatgct ttgcaaaagc ccgtttagac ggcagtttat cccctgctat
     1441 aagtatgttg ctttcaatgt cgttttttag aaaacggtaa agttgctcat agagagcggt
     1501 gccttcttgt gtgttaaaag tgtaggtaag cataatctga catgataaga aaaacataaa
     1561 atggtcattt taaacagttc agattaaatt acaatacatg ctgtttcctc actcaaattg
     1621 gctgagtgta tttaaattgg tagatgaaca ctcgcatcca gcgaatataa aaataaactt
     1681 aatgccgagc taatcgaaac tacgaaaagt tcaattattc aacaattaga aggaaaaagt
     1741 acaatgacta atcgctatga tttaaacaga caacttgctc aaatgttaaa aggcggtgta
     1801 attatggatg taactacccc tgagcaagcc tgcattgcgg aagaagctgg agcttgtgca
     1861 gtaatggcac tagagagaat tcctgcagat attcgtgcag ctggtggcgt ttctcgtatg
     1921 agtgatccca agatgataaa gagtatccaa gcagcggtat ccattcctgt aatggcgaaa
     1981 gtacgtattg gacacgttac agaagcacaa atcctgcaag cgatcgaaat tgactatatt
     2041 gacgaaagtg aggtgctttc tcctgcagat gataccttcc acattaacaa gcgtaaattt
     2101 gaagtgccat ttgtatgtgg agcaaaaaat ttaggcgaag ccctacgtcg tattaatgaa
     2161 ggcgctgcta tgatccgtag taagggcgag ccaggaacag gcaatgtggt gcaagcagta
     2221 catcatcttc gcaaaatgaa acaagaaatt gcccgcttgg tttcacatac cacagatgaa
     2281 ctttatcacg tagctaaaga gctccaagta ccatttgatt tagtacaata tgtacatcag
     2341 taccaaaaat tgcctgttgt cacctttgct gctggaggtg ttgcaacccc tgccgatgct
     2401 gcattgatga tgcagttagg tgcagaagga gtcttcgttg gctcaggtat tttcaagtca
     2461 ggcgatcctg ctaaacgagc gcgggccatt gtacaagctg ttaccaacta caacgatcct
     2521 aaattacttg cggagctttc tgaagattta ggtgaagcaa tggtaggaat taatgagcaa
     2581 gagattgaat tgctaatggc agcaagaggt gtctaatgaa aattgctatt cttgctctgc
     2641 aaggtgcatt tagcgagcat actgataaac tccagcaact aggggttgaa agtatggaaa
     2701 ttcgtcaact tgctgattta aaccaagatt ttgatggtct gattttacct ggtggcgaat
     2761 cgactgttca aggtaaatta ttacgtgaat taggcttgct tgagccgctt cgtcaaaaaa
     2821 ttttaaatgg cttgccaacg cttggaactt gtgcgggttt aattttgctt gcggaaaatt
     2881 tggtaaacga cgataaaaaa catttggcta ctttgcctgt aacagtgaaa cgtaatgctt
     2941 acggaaggca attaggctcg tttttagtag aagaagaagt taaatatctc ggtaaaattc
     3001 ctctcacatt cattcgtgcg ccttatatag aaagcactgg aaaagatgta gaaattttag
     3061 ccaagataag cggtaagatt gttggagtaa aataccaaaa tcagataggt atatccttcc
     3121 atcccgaagt gaataatgat ttaagttttc accgctattt tgtggaaatg tgccgaaaaa
     3181 ataagtaaaa gaaaaggggc tattgcctct tattttttat acttttttag aaaaagtagt
     3241 tttgaataaa aaaatactaa aactctattt cccttatgtt attattatag taacttttac
     3301 tactatttat ttcacaatca aaaaaggaat cagactatga gccaacttga caccttaagc
     3361 aaaatgaccg ttatcgttgc tgacactggt gatattgaag caatcaaact ttataagcca
     3421 aaagatgcaa caacaaaccc gtctttaatt ttaagtgcat cggcattacc gcaatatgct
     3481 ccattaattg aagaagcgat taattacgca aaagcacaaa gtagcgataa agatcaacag
     3541 ttagttgatg ctgaagataa attagcggta aatattggtt tagaaatctt aaaacttgta
     3601 cctggacgta tttctacaga agttgatgct cgtttttctt atgatactga aaaaactatc
     3661 gctaaagcac gtaaattaat tggattatat aacgatgcag gcatcagtaa tgatcgcatt
     3721 ttaattaaaa ttgcctctac ttggcaaggt ataaaggcag cagaacagtt agaaaaagaa
     3781 ggcattaact gtaacttaac gttattattc tctcaagctc aagctcgtgc gtgtgcagaa
     3841 gcaggggttt acttaatctc tccattcgtt ggtcgtattt tagactggta caaagctcac
     3901 gaaggtaaag aatatgctcc agctgaagat ccaggtgtaa tttcagtaac caatatatac
     3961 aattactaca aacaacacgg ttatgacact attgtaatgg gtgcaagttt ccgtaatgta
     4021 ggagagatca ttgagttagc tggttgcgac cgtttaacca tctcaccacc gttattaaaa
     4081 gagctacaag agagcgatga aaaattagtt tgcaagctag attacaaagg tgaaatcaag
     4141 cctcgtccag aaaaaatgac agaagcagaa ttctactggg agcataacca agagccaatg
     4201 gcagtagaaa aattagctga aggcattcgt aaatttgcga ttgaccaaga gaagttagaa
     4261 gcaatgcttg ctgaaaaact tcaatagaca acgcataaaa aaaccggcat taacgataat
     4321 taatgccggt tttaatttct ataaatgatt atttaaactc ataacgtcta atcgttttta
     4381 gatcgctatc ttcattttta atttcatcgg caagatgaac acgagcacca accgctgcat
     4441 gtgcatcata ctcacgagtt agagtcacag tttcaccatt atctcgttga actgtaagtt
     4501 caacaacatc gtttgatact gctttgctag ataaatgttg cattaccttt atcagaataa
     4561 acatctgcag tacaagctgc taacataagt gaagctaata cagctaaaga aagttttttc
     4621 attaataata tatcctctag gaaaaactaa aattaaagca gagaaacatt caggtctgaa
     4681 ttagacccta cgattctcac acgtttgcca ggcacaaaac cgtcttcttt cttttgaacg
     4741 accacgattt ctttaccatc atctttgcga ataaccattt ccaatgaaga aacttgactc
     4801 gctttttgtt ctacttgatt accaattacc gcaccggcaa ctgcccccac tgcggttgca
     4861 atcgcttgcc ctgtaccacc gccaatcgca ttaccggcaa cgccacctaa tacaccaccg
     4921 ccgacagtac cgatcacacc ttcactgcgt gcttgaattt tcacatcacg cactgaaaca
     4981 atagtgccat aagcgataga acgagcttct tttgcctgct caccggaata aacgcttccg
     5041 ctaaacacgt ctgtatttgc acagccaact aaagcaaaac ttgacattaa tgcgacagct
     5101 aaagctaatt ttttcatttt gtttgttctc cgaaacgtta attttctgac ataattacac
     5161 tttttatatc ataagggtgg agctttagac aataaggatt acaaaaagtt acatttctca
     5221 agctgatcgc aatgcttgga tttggcaatc tctccccttc tacctgaggt tggctgattt
     5281 ttaatttaat ctcagaatta tcagcaagtc taaagtgcga caatgccctt gacacccatt
     5341 gttccgaact ttcgttgtct aacatcggaa aaaccagctc aatatgttcc cagccttctt
     5401 ctaaataaac cttatttttc ggaaaaggca actcgacaat ctttacaaat tgtccgcaaa
     5461 attcaaccgc ttgtattaat gcaaacagcc ctatcggtct gccgtttacc tcgctctctt
     5521 taagtaaggt tgccccatca agcaaaagga tcttccactg ttctgcggtt tcggtttggt
     5581 tcattcttac cgcaagatga tcgatttcat acgctgctaa atcaatgccg gcgatttcag
     5641 caatttgtcg gattttctgt tcaaattgcg ataaatcgcc aaaacaagcg gtcattttct
     5701 cgaaaaattt tgcattttct gctataattt tgtccatttt tttgtaaata gaatttaaat
     5761 aggttaaaca gtgaatattc aacaaatttt atcagataaa attaaacagg caatggtagc
     5821 aagcggtgca gacagcaatg tcgagccttt agtccgccaa tcgggcaagc cggaatttgg
     5881 cgattaccaa gccaatggtg cgatgggtgc agcgaaaaaa ttggggatga atccgcgtga
     5941 atttgcccaa aaaatcttag agaatgccga tttgaacggt attgccgata aattagaaat
     6001 tgccggtccg ggctttatca acattttctt aaacccagaa tggctggcgg agaacactaa
     6061 cagttcattg caagcggtca attttggcat aaaaactgca aatccgcaga cgattgtgat
     6121 cgactactcc tcgccaaacg tagcaaaaga aatgcacgtc gggcatttgc gttccaccat
     6181 tattggcgat gcggtagttc gtacccttgc gtttttaggc aataatgtga ttcgtgccaa
     6241 ccacgttggc gactggggta ctcaattcgg tatgctgatc gcttaccttg aaaaaatgga
     6301 aaatgagcac gccagcgaaa tggagctaag cgatttagaa gccttctatc gtgcggcaaa
     6361 agagcattat gattcagacg aagcattcgc cgaaaaagcc cgtaactatg tggtgaaatt
     6421 acaaagcggc gataaatatt gcttaacaat gtggaaaaaa ttggtcgata ttacaatgca
     6481 ccacaatcaa gagaactaca atcgcttaaa tgttacgctc accgaaaaag atgtaatggg
     6541 cgaaagcctc tacaatccaa tgttgcctga aattgtggcg gatttaaaag ccaaaggctt
     6601 agcggtggaa gatgacggtg ctttagtggt tttcctcgat gaatttaaaa ataaagatgg
     6661 cgacccaatg ggcgtaatcg tgcagaaaaa agatggcggt ttcttatata ccactaccga
     6721 tattgcggca gcaaaatatc gctacgagac cttaaaagct gaccgagcct tagtcttttc
     6781 tgacagccgc caagctcaac atatgcaaca ggcatggctc attacccgca aagcgggcta
     6841 tgtgccggac agtttcagcc ttgaacaccc gttcttcgga atgatgctag gcaaagacgg
     6901 caaaccgttc aaaacccgta gcggtggcac agtcaaactc aaagatttat tagatgaagc
     6961 ggtagagcgt gccgataaac tgattgccga acgttcaacc gagctaactg cggaagaaaa
     7021 agccgccgtg gttgaagcgg ttgcgattgg ttcggtgaaa tattctgact tatcgaaaaa
     7081 ccgcaccacc gattatgtgt tcgattggga caatatgctg acctttgaag gcaataccgc
     7141 cccgtatatg cagtatgcct acacccgcat tcgctccatc tttgcccgtg cgaacattga
     7201 cgaaaatgca ttgagcggtt caatccaact caatgagcca aaagagcgtg cattagcagt
     7261 gaaactattg caatttgaag aggcattaaa cggcgtggca aaagaaggta tgccacatat
     7321 tttatgccaa tatttatacg agcttgcagg tagtttctcc agtttctacg aggcttgccc
     7381 gattctcaat gccgaagaaa caaccaaaaa cagccgtttg aaactcgctg ccttaacggc
     7441 gaaaaccttg aaacaagggt tggatttact cggtattaaa actgtagaga agatgtaata
     7501 caaactctct ccccttgtgg gagagagacc gcttatgagc gttcagcgaa ataagcagag
     7561 agaggggaca agcggtaatt tttattaaaa tttttacaca ttttcccctc tccctgattt
     7621 ttcttctgaa cgaagaaaaa tctgtccctc tcccacaagg ggagagggca tataaaagga
     7681 aacaaatatg aaatttattg acgaagccct gattcgtgta gaagcaggcg atggcggtaa
     7741 tggctgtgtg agcttccgcc gtgaaaaatt tatcccgaaa ggcggacctg acggtggtga
     7801 tggtggcgat ggtggtgatg tgtatttaat tgccgatgaa aacctaaaca cccttatcga
     7861 ctaccgcttt gaaaaacgtt atgccgctgg gcgtggcgag aatggtcgca gtgccggctg
     7921 taccggacat cgtgggcaag atattaccct acgagtgccg gttggaaccc gtgcgattga
     7981 taacgacacc caagaaatta ttggcgattt aacccgccac ggaatgaaaa tgctggtggc
     8041 aaaaggtggt tatcacggtt taggtaatac ccgctttaaa tcctcagtaa accgagctcc
     8101 acgccaaaaa accaacggta cgcctggcga aaaacgtgat ttgaaattag agctgttact
     8161 gcttgccgat gtgggaatgc ttggcttacc aaacgccggt aaatccacct ttatccgcag
     8221 tgtctctgct gccaaaccaa aagtggcgga ttacccgttc acgacgctgg tgccaagttt
     8281 aggggtagcc cgtgtggggg ccgaccgcag ttttgtggtt gccgatattc cggggttaat
     8341 tgaaggtgca gcagatggtg cagggctggg gattcgtttc ctaaaacact tggaacgttg
     8401 ccgtattttg attcacttag tcgatattat gccgattgat gaaagcgatc cggctcataa
     8461 tatttcggtg attgaatccg agctttacca atacagcgaa aaactcgccg aaaaaccgat
     8521 ctggttggtg tttaataaaa ttgacaccat cggcgaagaa gaagctgctg agcgagcaaa
     8581 agacattgcc gagcaaatcg gctgggaagg cgattactac ttgatttctg ccgctaccgg
     8641 tcaaaacgtg caagctctca ctcgtgatat tatggacttt attgaagcca acccacgcga
     8701 agtggaggaa gaaaataaag cacctgaaga agtcaaattc aaatgggaag actaccacaa
     8761 cgaagcaatg caaaatgcgg tagaagaaga ttgggacgac gattggagcg aagaagatga
     8821 cgaaggcata gagtttattt acgaacgcca ttagtgcaat aatacaagcg gttgttttta
     8881 aacggagatt tgcaaatttc cggagaaaaa caaccgcttg taggtttaag gagagtttat
     8941 gcttagctca acatcgtgcg atttattcaa tattccgttc ttccaatttg ctcagatgaa
     9001 gaaatattgc cctgaggaga tccctcgaat taaggcggaa tataaaactc aatgggaaat
     9061 ttggaaaaag ctacatcagg aagtttctcg tcagcttggg cagccgtttg ctccaccaca
     9121 tattgagaag tggtgcaacg gttggcaagt tcgagcccat ttttttgcct attacaagta
     9181 tgaatttaat cgaaattctg cggctattct ttccgtgatt ttaaatcgtc gccgtttgca
     9241 agtgagcctt gattggcatt gttatcgagc cgatcgctcg caaattaacg tgcatcaata
     9301 caatcaatgg tgggaaaatt tagatcggga aaagtttgct gattttgaga tttggcacgg
     9361 aagtgagagt gaatatgatg attttagaac cgttagtcag atgtcagagc aagcgttcac
     9421 cctaactaac gaggaagatt tttggtgtat cggcaaaaat gtggaaaagg acgatttgga
     9481 taacattgat gtagtagaat ttatctacca aaccattcgg gcattattgc cactttatga
     9541 gaaatgtcat caataaacac taaaaagaga ggcgaacatc atttgttcgc ccctttcaaa
     9601 atttaagcta tcacttcttt tttattttca atgcgtaaac ggtagcgttt atccaacata
     9661 cagagtaaac caccgagagc cataaacagc ccgccaatcc aaatccagcg aatgaacggt
     9721 ttataataca aacgcactgc ccaagagtta tcttctaatt tttcgccaag tgcagcgtat
     9781 aaatctcggg taaagcccca gtcaatcgcc gcttcggtca ttcccattcg gctcaccgta
     9841 tagaaacgtt tttcagcatt aagtgtggct tcatatttac cgtttcgagt aatttcaagc
     9901 tcggcagtgc cgccttgata gtttgcccca tcggtgattt taataccttt aaattcaaat
     9961 tggtaatcta aaatctcagc tttatcaccc acattcattc tgacatctcg ttcaatgctg
    10021 aaattttggc taaatgcaat gccgaacact gtcatcgcaa cccctaagtg agccagcacc
    10081 attccccaat gtgaacggga cagtttgaaa atgccactta agaacgagtg gcgatgggtt
    10141 gcacgttggt gtagctcata caggctaagt aacacaataa agacagacat catcgtgcct
    10201 aacaccacac tcacggtaat ggtgttacgg aataagtatg gcaatccgaa tccaagcaat
    10261 gccattaaaa tagttgcaat aattaccggt ttacgaatag cagaaacttg gtctctacgc
    10321 catttcacta atggtccaat ccctaataca aatgagaaag gaaccattaa aattaagaac
    10381 atttggtcaa aaaatggtgc cccgattgaa atcgtcccta agccgatttg tttgtgaatt
    10441 aatggcagta aggtccctaa aaacaccacc gataaaaatg ccattaataa aatattatta
    10501 atgagtagca tcgtttctct tgaatagcgt tcatagttat ctaagctttt aatttccgag
    10561 cctttgaatg catacagcag taaagaacca cctactacta acaccaagta agccaagatg
    10621 tataaaccac gagttggatc tgaagcaaag gcgtgaactg acaccaaaat gcctgaacgc
    10681 actaagaaag tccccactaa acagagcgag aaagcaagaa tcgctaataa gaccgtccac
    10741 gctttaaatg tgcctcgttt ttcagtcact gctaatgaat gaatcagtgc tgttcctgcg
    10801 agccacggca ttaatgaggc attctcgaca ggatcccaga accaccagcc accccaacca
    10861 agttcgtagt atgcccacca agaaccaagc acgataccga gcgttaaaaa tacccacgct
    10921 gccattgtcc acggacgaga ccatcttgcc cacgcagtat ctaaacgccc tgtcatcagt
    10981 gaggcaatcg caaaagcaaa ggcaacggag aaacccacat agcccatata aagcaacggt
    11041 gggtggaaga tcaagcccac atcttgcagc attgggttta attctttgcc atcaatcgga
    11101 aaatttggga aagttctatc aaacgggttg gaggtaaaaa tcacaaacat caaaaagccg
    11161 atgccaatga cccccattag tcctaacact cgagcaacgg catcttccgg cattttacgg
    11221 gtaaaggttg ctaccccgac agaccaaagc gacaacaacc aaacccaaag caataatgag
    11281 ccttcgtgag cgccccacac cgcagataaa cgatattgca acggtaaacg gctattggag
    11341 ttgttcacca catattgcac ggtaaaatca ttcaccgcaa acagataaaa cagcgaacca
    11401 aaagagacag tcaatgccaa aaacattgcc caagtcatcg ggcgggcaag agcaattaag
    11461 gtgctatttt gcttttctgc tccccaaagc ggtaaaactg ccaacaagat agaaatcgct
    11521 agggctaatg ccaacgtata attgcctaat tctgcaatca tttgctttcc ccttgcacat
    11581 tgttggcttt ttctgcttcc gcctcggctt tcattttgcg gtcggtttcc gattcacctt
    11641 tcagatcttg ttcagacaca cctgattttt tatgctgttc ttttaattta tcgcctaatt
    11701 ccggtggcat atagttttca tcgtgttttg ccagaacttc cgtagctttt aaacgggttg
    11761 gttcaatcaa cacgccttgt gccacaatgc cttgcccttc acggaataaa tccggcaaaa
    11821 ttccttcgta ttccacggta atcgaaggcc cgatatcatt gagatcaaat actactttta
    11881 aacttttatc atcacgcttt accgtatctt ccactaccat tccgcccaca cggatacgct
    11941 gaccaacttc aggcttttgt ttcggatcat catttttacc gtttacaatt tcagacggcg
    12001 tgtaaaacag atcgatattt tggcttaacg cataaagtgt caagcctgct gcgacagaaa
    12061 gcccaagtaa tatcgaaacc accactttta atcttgattt gcgtcttgga ttcatcgtaa
    12121 tcacccttca aaataaatgc aaaattgcat aaaaactcaa aaataaatta gtgtaagaat
    12181 agcaaaaaac cgcaaaacat tcccgatatt tcaaggaagt tttgcgattt ctcaaatcaa
    12241 atacctataa agaagtatga ggctatcgtt gcaaaaaata aagttatttc gaccgcttgt
    12301 ttattgtgat gtttgcttta atttttcttc acgcacaatc tctttttttg cttgagccaa
    12361 aatcgctttc tgttcacggc gactaagcca aatcagccca atcattgcaa tgaaactgac
    12421 accataagag agccatacat aaaagccgta gccacccatt gcaaaaaaat cgctgattga
    12481 ttcaaattga aatgtcattg ttctctccta ctctaaactg attttgccag ttgttttacc
    12541 caagggcgat tacgttcgtc ctttaataag gcaatgcgat aacgccaaat gctaaaccaa
    12601 gcggtaaaaa ttaagctacc gaaaatcgcc aatagcaacg gaattaacat ttccaccgcc
    12661 atagacggtt tatcgaattt agtgatggtc gccccttgat gcaaggtgtt ccaccattcc
    12721 accgaaaagt gaataatcgg caagttaatc acgccaacaa ctgacagcac agccgccgct
    12781 ttggctccgg tttgtctgtc ttggaatgcg gaataaagag ccatcacgcc gatataaagg
    12841 aaaaataaca ctaaagcgga ggttaaacga gcgtcccaca cccaccaagt cccccacatt
    12901 ggtttgcccc aaattgcacc ggttgcaagt gaaataaaag cgaatactaa gccgataggt
    12961 gccattgaaa tcatcgccaa gttagcttgg cgaatttgcc aaaccaatgc caccaagcct
    13021 gccaccgcca ttgagccata tacgcccatc gaccaaattg ctgccggcac gtgaataaag
    13081 ataatgcgat agctatcgcc ctgttggtaa tctttcgggg caaaagccaa gccccaaaca
    13141 aaagcagccg ctaacataat caaacttagc caacctaaaa acggttggat tttccctagc
    13201 aaatggtact gcgtttccga ttttgcataa gggtgtagcc atttccacat atatttctcc
    13261 aaagtaaata attcccctca cccgtttaca ggagagggac gatttgagct tcgttcagaa
    13321 gcgaaaatca gggagagggg aaaaagttgc aaattttcat aataattcga ccgcttcccc
    13381 tctctctgaa aaacacctct gaacgaggtg tttttcggtc tctctccctc aagagggaga
    13441 gaggaagttt tagttcaaac taattcttaa tgcaccggca atcgcaaacg gcgaaaaagt
    13501 taaagtaacc gctaaaattg ctccgataat cgccagttgt ccgctataac ccatatttaa
    13561 ggtggcggct tctaataccg cagcggcaaa aatcagtacc ggtaagaata acgggaggat
    13621 taataaactc agcaacgtac cgcccttgcg taagcccaca gtgagtgcca cgccaatcgc
    13681 tcctaagcag cttaaaatcg gggtgccgag taataatgtc agcactaacg cccaccaaac
    13741 gtgggtttca agtgaaagca aaatggcagc aatcggtgaa agtaaaatca acggtaagcc
    13801 ggtcagcagc cagtgagcaa tcactttcgc taacgcaacc tgcggcaagg caagcggcag
    13861 taacattaat tgctcgagcg aaccgtctaa ataatcatca cggaataacc gctcaaagga
    13921 aagcaatgca gaaagcaaag cagctaccca cgcaatgccg ccggcaattt tgcctaataa
    13981 ttcggggtta ggtcccatta aaatcgggaa tacggtaatc accattaaaa aaaaccacaa
    14041 cggatttaaa atctccgagg gtttacgaaa ggcaatggtg agttcccgct gaataatagt
    14101 caataaaatc atactttaaa ttgatctaac gaaataatac gcactttgtc gctttcagca
    14161 gcctggtggc tggtaaaaat cactaatctg ccttgctcgc aatgctgttc aatatgagca
    14221 atcagatccg ccacaccctt tttatcaata gcggtaaagg gttcatctaa aatccaaagt
    14281 ttggcgttag tgagccacaa ttttgccaac gccacacggc gttgctgacc ggctgacaaa
    14341 tgcgaacaag gcaaatcttc acgcccgatg agcgacactt tcgtcaatgc gtgccaaagg
    14401 gcatcatcat cttgcggtaa ctgttggatt ttctggtaga aacgcaaatt ttcccacggt
    14461 gttaattccg gttttacccc cgaataatgc cctaaataaa atagttcaga ataatagtga
    14521 tcacgctgtt tttgaattgc aatatcgttc cacagcacct caccttccgc aggtaaaaaa
    14581 agcccggcta aaatacgtaa caggctggtt tttccaatgc cgttatgccc ttcaatctgc
    14641 acccattcac cactttgcac ggtaaaactg cacccttcaa acaaacgggt ttcgccccgt
    14701 tcgcaggcaa tctgattaag tttaagctga tattgggccg tttggttcat tatttttcat
    14761 ctggttgaac attttagccg aagtgtatca taagcctttg atttaacgta gcaaataaat
    14821 tacttcttta gaggtagcaa gcggtcaaat tttcaaaaag ttttgcaaat tttgataaga
    14881 atcaaaccgc ttgttacaga gagaggattt ccttcacaaa aggaatggtt aatttacgct
    14941 gggcttggag agacgcttta tccaacttat ccaatatttt agagagttgc tctaaatccg
    15001 ttcccgcttt ttttaacaga aaatgagcga cctcatcgga caattccacc cctttttggt
    15061 gagcatttaa ctgtaaaatt tggcattttt gttcatcggt taaatcgttt agctggtaca
    15121 cttcgcccca agttaagcgg gaacgtaaat ccggcaattg gatattgagt tggtgtggtg
    15181 ggcaatcggc actgattaac agcaaggttt tttgcccttc gttaaacaag ccttgttgtt
    15241 ctcgaatttg gttaaacagg ttaaaaatag caagttccca ttcagcatct cctgcaatcg
    15301 cttgaatatc atctaggcaa atcacattca gcagttcggc attatctaac accaacggcg
    15361 agaaataatt ggctttagtg agcggaatat aactagaagt ttggttattt aaaagaaagt
    15421 ggttacttac tgctttcaac aaatgacttt taccgcagct cttaccgccc caaatgtaaa
    15481 aaaacggctg ttgaacatcc gtaaaatttc gtttgaggga tccaagcaac acttcgctgt
    15541 tttggctata aaaattgtcg aaagtgtctt catcaatttg atgaatgggt agaggtaact
    15601 gcaaggcttt ccttaaatct ctaagtttga tatttttcta agaatagcgg aaaagcaggg
    15661 gtttgagaag taaaaatagt gagaaaatat ccactcattt ttctaatgaa gagatgacaa
    15721 gcggttgaat ttccacataa ttttgtcaat ctgaccgaaa acccaccgtt ttgtgttaaa
    15781 aaaagattgc agttagctca aaaaattgta tattcaaagc tttctactta aaaagtagag
    15841 taaaacaact attacaaaca caacggagtg aatatgaaaa acatgactaa attatcgcta
    15901 ataacattag cgctagccgc ttcaagtagc gtctttgctg caccgaaaac ctttgtttac
    15961 tgcttagagg cttcgccttc agcattaagc ccagtgctat caacagacgg tgcaagcttt
    16021 gatgtgaacg ccctcccgat ttataacaaa ttaaccgact ttgaagacgg tacaactaat
    16081 gttattccct ctcttgccga aaaatgggac atttcggaag acggcaaaac ttacaccttc
    16141 cacctgcgta aaggcgtaaa attccacgac aataaagaat ttaaaccaag ccgtgagtta
    16201 aatgcagacg atgtagtgtt ctccattaac cgtcagtttg atccaaacca tccattccac
    16261 aaagtttccg gcggtaacta cgaatacttt atcggtatgg atatgcaaaa tattatcgat
    16321 aaagtggaaa aagtggacga tcacaccgtt aaaatcagct taaaagtgcc aaatgcgccg
    16381 ttcttagcta acttagcgat ggatttcaac gccgtttact cagcggaata tgcagagcaa
    16441 tccttaaagg ccggcaagcc tgagcgtatt gataccaacc caatcggcag cggcccgttc
    16501 cagtttgtgg attaccaaaa agatgccacc gttcgttaca aagcctttga aaactactgg
    16561 caaggcacag cgaaaattga ccgcttagtg tttgcaatta ctccggatgc atcggtacgt
    16621 ttagccaagt tacaaaaagg cgagtgccac gcaatgcctt accctaaccc ggctgatatc
    16681 gaagatctga aaaaagatcc aaatattgaa ttaatgagcc aatctggaat gaatatcggc
    16741 tatttggcat taaattcatc gattaaacca ttagataacc aaaaggtacg tcaagcatta
    16801 aatcacgctg taaacaaaca agcgattgta gatgcggtat atcagggagc cggtcaagta
    16861 gcgaaaaacc caattccacc aacaatgtgg agctataatg aagcggttca agactatgac
    16921 tacaaccctg aaaaagccaa agcattgtta aaagaagccg gttttgaaaa tggttttgat
    16981 actgaacttt gggcaatgcc ggtatcacgt ccatataacc cgaatgctcg ccgtatggct
    17041 gaacttatcc aagaagactg gaaaaaagtg ggcgtgaatg cgaaaatcgt cagctatgaa
    17101 tggggcgaat atctcaaacg cttacgccaa ggtgaagcgg caacctcaat gattggctgg
    17161 acaggcgata acggtgaccc agataacttc ctcaacacct tattaagctg ctcagcggtg
    17221 gaagccggtt caaactacgc caaattctgc cacaaaccgt ttgaagaagt cgtgcttggt
    17281 gctgcccaag aaagcgacaa agcaaaacgt accgagcttt ataaacaagc tcaagtgatc
    17341 ttcaaagagc aagctccttg gattacgatt gctcactcca ccgtttactt cccggtgcgt
    17401 aaagaagtaa aaggttatgt gatgagtccg ttcagcttac ataacttcta caaagtagat
    17461 ttagcggata aataatccgc caacaagcgg tagaatttgc agattttttt acaaatttga
    17521 ccgcttgtcc tcccctcttt gaactacgag gggcaggggg gaaatttggc agaagcgatt
    17581 gccgaagtga gaggattgta aaagaggaaa taaattttct gtcttattga ttattttctt
    17641 cgttaattac tactgtcaaa tctcccctac cccctctttg ctaaagaggg gaatcagatc
    17701 gagagatcag acaactttga tgaaaatcca acctaagaga ttttaaatgt tttcatttat
    17761 tttaaaacgt gtgctaatgg tgatccctac ctttatagcg attacgttaa ttacttttgc
    17821 ccttgtgcat tttatccccg gtgatccaat tgagatccga atgggggaac gtggattatc
    17881 gcctgaggtt catcaacaaa tgatggaaca actcgggctg aaccgaccgt tgtttgaaca
    17941 atacatcagc tacatcaaag gtgtattgca cggtgatctt ggtaactcat ttcgtaacaa
    18001 cgaaccggtg ctgaaggaat tttttaccct attcccagcc acggttgagt tggcattttt
    18061 tgccctgctc tggtcgttga ttttcggcat tattctcggt gtgattgctg cggtgaaaaa
    18121 agaaagttgg atttcacaca ctgtaaccac gctttcactg accggctact caatgccaat
    18181 tttctggtgg ggcttgattt taattcttta tttctccacc ccgctcggct taccggcttc
    18241 aggtcgttta ccatctgaat actggattga agccgaaacc ggttttatgc tgattgatac
    18301 ttggaattcg gacgaaccag gggcattttt agcggcaatt aaatctctga ttttgccgtc
    18361 tatcgtactg gggacaatcc ctcttgcagt tgtgacccga atgactcgct cttcaatgtt
    18421 ggaagtgttg ggtgaagact atatccgcac cgccaaagcc aaaggcttaa acactacccg
    18481 aattgtgatt gttcacgcat taagaaatgc cttgattccg gtggtaacgg tcgttggctt
    18541 aattgtcggg caactgcttt caggagccgt tttaacggaa aacatcttct cgtggccggg
    18601 tatcggcaaa tggattattg atgcaatcaa cagccgtgat taccctgtac tacaaggctc
    18661 agtgctgatt attgctacta ttattatttt agtgaacctt acggtagatc tactctatgg
    18721 cattgtcaat ccgaggattc gacatagtta gaaaaattcc ttcgattttt cccctcttta
    18781 gcaacgaggg agttacacaa gcggttcaaa ttccgcaatt ttttacaaga ttatttttag
    18841 ttggagttaa tgatgtcagg aataacggcg gtaaatccac ccgcacccaa aacaccgtta
    18901 caggagtttt ggtactattt ttgtcaaaat cggggggcat taataggact tacctttatt
    18961 gcaatcgtct ttgttgcgtg cgtattcgca ccttgggttg ccccttttga tccaatcgaa
    19021 caaaatcgca gtgcgttatt gctccctcct gcttggcttg aaggggggaa ttccgctcat
    19081 ctgctgggta ctgacgatat tgggcgtgat attctttccc gtattattta tggttcaaga
    19141 ttgtccgtct ttatcggctt agtcattgtg ctactttctt gcgtattcgg cgtgatttta
    19201 ggtctacttg ctggctacta tggtggcaca ctcgacatca tcattatgcg ttttgttgat
    19261 attatgctgg cgattccaag cctgctttta actatcggcg tggtcactat tttaggccct
    19321 tcattgataa atgccgctat tgcgattgcg attgtctcca ttccaagtta tgttcgcttg
    19381 acccgtgctt ctgtattaag cgagaaaaac cgtgattatg ttactgcttc tcgtgttgct
    19441 ggtgcgagcg tgcttcgctt aatgtttgtg gtgattttac ctaactgttt agctccgctt
    19501 atcgttcaga tgacgatggg gatctcaaac gctattttag aacttgccgc cctcggcttc
    19561 ttaggcattg gtgcacagcc gccaacaccg gagcttggca caatgcttgc cgaatctcgt
    19621 ggctttatgc aatcggcaaa ctggctggtg accattccgg gtctagcgat tttatcgtta
    19681 gtattagctt tcaacttaat gggtgacggc ttgcgtgacg ccctcgatcc aaaactgaaa
    19741 caataggaga tctaaaatgg cattattaac ggttgatcaa ctttccgtcc attttggtga
    19801 aactaaaaca ccatttaaag cggtggatcg tatcagttac gaagtcaatg aaggcgaagt
    19861 attaggcatt gtgggcgaat ccggttcagg aaaatcggta agttctctcg ctattatggg
    19921 cttaatcgat ttccccggca gggttatggc tgaaaaattg tattttaacg gcaatgattt
    19981 attggcatta aaaccaaaag aaaaacaaca gattgtaggg gctgatgtct caatgatctt
    20041 ccaagatgca atgaccagct taaatccgag ctatactgtg ggctatcaga ttatggaagc
    20101 cctaaaagtg catcaaggtg gctcaaaagc cagccgtcgt gagcgagcga ttgagttgct
    20161 gacgatggtc ggtattcccg atcctgaatc ccgtttagaa gtttatccgc accagctttc
    20221 gggtggtatg agccagagag tgatgattgc gatggcgatt gcctgtcgcc cgaaattatt
    20281 gattgccgat gagccgacta ctgcgttaga tgtgacgatt caagctcaaa tcattgattt
    20341 attacttgaa ttacaacgca aagaaaatat ggcgttgatt ttaatcacgc acgatttagc
    20401 gttagttgcc gagtctgccc atcgcattat cgtgatgtat gcagggcaag tcgtggaaga
    20461 gggcaaagcc gagcagatat tcaaagcacc actgcaccct tacacccaag cattgctcaa
    20521 agccttaccg gaatttgccg aagggaaatc ccgcctgcaa tcactaccgg gcgtagtgcc
    20581 gggcaaatat gaccgcccac aaggttgctt actcaaccct cgctgcccgt atgcaaccga
    20641 aaaatgccga accattgaac cggcaatgca gataatcaac ggcagacagg tgaaatgcca
    20701 cacgccactg aatgcacagg gtgagccgat aaggatagct gtataacgtc ataaagagta
    20761 gggacgcaat gcttcgcgtc cgttacaagc ggtgattttt aaccgatttt tgcaaaataa
    20821 cgatagtgga cgcaaagcat tgcgtcccta cattttccga gaaggaaaac agaatgaaag
    20881 aaaataattc tctcccacca ttcctcaaag cagtggactt aaaaaaatac tacccagtta
    20941 aaaagggaat gttcgctaaa ccgaaaacgg taaaagcgct ggatggtgtc tcttttaccc
    21001 ttgaacgtgg caaaaccctt gcgattgttg gcgaatccgg ctgtggaaaa tcaactttgg
    21061 ggcgaatgct cactatgatt gaaagcccaa ccgaaggtga actgttctac aacgggcaga
    21121 atttcttagt caatgacaaa gaaacggctc aactacgccg taaaaaaatc caaattgtgt
    21181 ttcagaaccc gtatagctcg ctcaatccac gcaaaaaagt aggtagcatt ttagaagaac
    21241 cattattgat taacaccaac ttatccgcaa aagaacgcaa agaaaaagtg ttggaaatga
    21301 tggcgaaagt cggcttaaaa ccggaatttt acgaccgtta tccgcatatg ttttcgggcg
    21361 gacaacgcca gcgaattgcg attgctcggg gcttaatgtt gcagcctgat attgtggttg
    21421 ccgatgaacc cgtttccgca ttagatgttt cggttcgggc gcaagtgttg aatttgatga
    21481 tggatttgca agaagaaatg ggcttgtctt acgttttcat ctcgcacgat ttatccgtag
    21541 tggaacatat tgccgatgaa gtgatggtga tgtatttagg gcgttgcgta gaacaagggg
    21601 ataccaaaac tatcttcagc aatccacgtc acccttatac acaagcgtta ctctccgcaa
    21661 cccctcgttt gaacccggag caacgccgtg agcggattaa actgactggc gaactaccaa
    21721 gcccgcttaa tccaccaaaa ggctgtgcct ttaacgcccg ttgcagattt gcaaccgatc
    21781 gttgctatgt ggagcgacca gagctgaaaa cctatcaaga cggtactcgc attgcttgtt
    21841 ttgtggtgga ggaaaataat taggcaacgc tcgctattta aaaggttaaa gtttttcaac
    21901 tttaaccttt atttttcata cttaatactc ctcatctttt gtagcaaaat ctttcattaa
    21961 tttgctgata tgctcacaat ggtgtttaaa tgacaatacg ggcaaataat caaatgcgtt
    22021 ttaacgccaa tcttctcttt taaagtgagt tttcgttcct ttgagtcaga aattaacctt
    22081 gttacttgtc ggcaattcat ctatttctct ccgttaattt ccttgaaaga cattgttgta
    22141 actgcagcct tgctcgatag attaatgtat ataaattatc tgatgtaata tttactactc
    22201 gacaaatttc atctgaggtt gcctctaaat attccctcat cataaatacc ctagcttgtt
    22261 ttgcaggtaa attgcttaag caaacttcaa ataatatcca aaattctttg gaataaacag
    22321 cttcttcctg ccagctagaa ggataatatt cttctttcca atgcccataa ttatcaaaaa
    22381 agtgattctc ttcgtcatca tcagctagat cactttctag tactatacga tcttttttac
    22441 gtaaataatc aataatttta ttttttagaa tagcaaatat ccaggttttc aatgctgctt
    22501 tacgctggaa attatcaata ttttttattg cattaacgaa tgcttcttga accatatctt
    22561 cagcaagagc aatatcttgt aattgtaact gagcaaattt caacatttgc tgacgaatat
    22621 cggcaagctg ttccgatgaa atatctaaag aaatcttgtt atgaatcata gtgttat
//
LOCUS       DANLXO010000030        22329 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.030, whole genome shotgun sequence.
ACCESSION   DANLXO010000030 DANLXO010000000
VERSION     DANLXO010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22329
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.030"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            37..1311
                     /gene="nadR"
                     /locus_tag="PXD69_001014"
     CDS             37..1311
                     /gene="nadR"
                     /locus_tag="PXD69_001014"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HDL6283225.1"
                     /translation="MTDFAYLQQKRKQLKLKVNDICEQAGVTRAYFNQLVSGKIKNPS
                     ANKLKALHSVLDIVEDSNQRSGVIFGKFYPIHTGHINMIYEAFSKVDVLHVIVCTDSE
                     RDLRLFQESKMKRMPTNEDRLRWVQQIFKYQQKQIFIHHLVEDGIPSYPNGWEDWSGR
                     VKALFEEKSINPTIVFSSEIQDKESYEKYLNLEVQLVDPTRESFNISATQIRNNPFQY
                     WRFIPKEVRPFFVKTIAILGGESSGKSVLVSKLANVFNTTSAWEYGREFVFEQLGGNE
                     QAMQYSDYPQMVLGHQRYVDYAMKHAHKVAIIDTDYITTQAFCIQYEGKAHPFLDSMI
                     REYPFDVTILLSNNTKWVADGLRSLGSKKQRQQFQHLLKKLLEKHHIPYIKIESPSYL
                     DRYNQAKEVVEAILNEEPIPLQFKQYNIHEFE"
     gene            1329..2021
                     /locus_tag="PXD69_001015"
     CDS             1329..2021
                     /locus_tag="PXD69_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL6283226.1"
                     /translation="MILFAGDPHGSYEHLYPILQQQTEEVALVILGDLQLTTPDELDR
                     LSQYCDIWFIHGNHDSKTVAAFDAIWNSSWKERNIHGKVVDIQGIKIAGIGGVFRGHI
                     WMPPNRPMFFDPIHFCQYSAPEKIWRGGIPLRHRSSIFPSDFEALENEKADILITHEA
                     PKPHPQGFSVINQLARKLGASKIFHGHYHDNFNYGNLNVSRECAIYNIGFRSLADING
                     NYLILGVDDREK"
     gene            2154..2876
                     /gene="arcA"
                     /locus_tag="PXD69_001016"
     CDS             2154..2876
                     /gene="arcA"
                     /locus_tag="PXD69_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HDL6283227.1"
                     /translation="MKIPQILIVEDELVTRNMLKSIFEGEGYQVFQASNGEEMHSVLS
                     TNEINLVLMDINLPGKNGLILAREIRENMKLPLMFLTGRDNEIDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLQRTMIDKENDVVKEQSEIESYRFNGWILDINSHSLISPEGEV
                     NKLPRSEFRALLHFCQHPGKIQTREDLLKKMTGRELKPHDRTVDVTIRRIRKHFEDHP
                     NTPEIIVTIHGEGYRFCGNIEP"
     gene            2896..3414
                     /locus_tag="PXD69_001017"
     CDS             2896..3414
                     /locus_tag="PXD69_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HDL6283228.1"
                     /translation="MKKLTIVALTCLFSTHLLAAPVGNTFTGIGVGVDVTTTKYKVEG
                     VKGKDSTGPALVVDYGIEQGNNFVGVVQGKAKVGSTKVFSDVKQKNKYTIAYQQGYRV
                     GSDLLPYVKVDASSSKIGNETYRGFGFGAGAKYAVSSDVELGAEYTRDNLKRSGTKLK
                     GNAFTANATYRF"
     gene            complement(3492..4721)
                     /gene="serA"
                     /locus_tag="PXD69_001018"
     CDS             complement(3492..4721)
                     /gene="serA"
                     /locus_tag="PXD69_001018"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDL6283229.1"
                     /translation="MAKISLDKSKIKFLLLEGVHQNAIDVLLAAGYTNIEVHKKALDG
                     QELIDAIKDAHFVGIRSRTFLTEEVLAQAPKLIAIGCFCIGTNQVDLNAAKRRGIPVF
                     NAPFSNTRSVAELVLAEMILLMRKVPTANAEVHRGVWNKSAAGANEVRGKKLGIVGYG
                     HIGSQLSILAEAIGMQVYFYDVENKLPLGNAQQVPTLEHLLSTCDMISLHVPEIDSTK
                     NLMSAERIAQLKEGSVLINAARGTVVDLDALAARIEDGSLRGAAIDVFPEEPASINDP
                     FVSPLCKFDNVILTPHIGGSTSEAQANIGTEVANKFVKYSDNGSTVTAVNFPEVSLPL
                     HTNTKRLLHIHENRPGMLNQINQIFVESNVNIAAQYLQTDAAIGYVVIDVESDNVDEA
                     LQRLKAIEGTIRARVLY"
     gene            complement(4758..5417)
                     /gene="rpiA"
                     /locus_tag="PXD69_001019"
     CDS             complement(4758..5417)
                     /gene="rpiA"
                     /locus_tag="PXD69_001019"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HDL6283230.1"
                     /translation="MDQQEMKKIAAQAALKFVKPDTIVGVGSGSTVNCFIDALASMKD
                     EIKGAVAASKASEQRLRDIGIEVFSANEVTELDVYIDGADEITPQGAMIKGGGAALTR
                     EKIVSSLAKKFICIVDKSKQVDVLGSTFPLPVEVIPMARSYVARQLVALGGSPEYREG
                     VVTDNGNVILDVHNFKIMEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAVIL
                     E"
     gene            complement(5562..6896)
                     /gene="glmM"
                     /locus_tag="PXD69_001020"
     CDS             complement(5562..6896)
                     /gene="glmM"
                     /locus_tag="PXD69_001020"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDL6283231.1"
                     /translation="MARKYFGTDGVRGEVGKFPITPEFALKLGWAAGKVLATQGTKKV
                     LIGKDTRISGYMLESALEAGLTAAGLSAVFVGPMPTPAIAYLTRTFRAEAGIVISASH
                     NPYYDNGIKFFSSVGEKLPDEIEEAIEAMLDKPMDCVDSANLGRASRINDAAGRYIEF
                     CKGTFPSELSLEGYKIVVDCANGATYHIAPNVMRELGAEVLEIGTKPDGLNINEKCGA
                     TDIKALQKVVVEAGADVGLAYDGDGDRLIMVDHLGNKVDGDQILFILAREALRSGKLQ
                     GGVVGTLMSNMSLELALKELAIPFSRANVGDRYVLEQLKEKGWKLGGENSGHIIVLDK
                     NTTGDGIIASLQVLAAMASHKLSLNDLAKAVPLFPQVLLNVRFEKGAANPLESNEVKA
                     VAADVEKRLAGKGRILLRKSGTEPLIRVMVECEDAVLAQSCAEEIVEAVKRN"
     gene            complement(6922..8454)
                     /gene="ilvA"
                     /locus_tag="PXD69_001021"
     CDS             complement(6922..8454)
                     /gene="ilvA"
                     /locus_tag="PXD69_001021"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HDL6283232.1"
                     /translation="MMNETQHSQSAIDYLRSILSSNIYDLAQVTPLQKMEKLSERLGN
                     SIFIKREDRQPVHSFKLRGAFAMISNLSKAQKEAGVIAASAGNHAQGVALSAKHLGLR
                     ALIVMPQNTPAIKVDAVRGYGGEVLLYGANFDEAKAKAIELSTELGMTFIHPFDSPAV
                     IAGQGTIGLELVQQKPDLDYVFIPVGGGGLIAGIAVLIKQVMPNIKVIGVESKDSACL
                     YHALKQGQPTDLERVGLFADGIAVKRIGDETFRLCQQYVDDVVLVDNDEICASMKLIF
                     ENVRAISEPSGATSLAGLKKYVKEHQLQDKNLACILSGANVNFHTLRFVSERCEIGEK
                     REALLAVTIAEQKGSFLKFCEILGNRAVTEFNYRHSDDKQACIFVGVRISGSAEKVEI
                     IKDLQQNGYDVADLSDDDIAKTHIRYMVGGRASSIQYEQLYSFEFPEQKGALLKFLQM
                     LTNWDISLFHYRAHGADYGDILAAFALNRGDEVELNRHLEQLGYRFQNVSESPAYQYF
                     LK"
     gene            complement(8715..9308)
                     /gene="slyD"
                     /locus_tag="PXD69_001022"
     CDS             complement(8715..9308)
                     /gene="slyD"
                     /locus_tag="PXD69_001022"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL6283233.1"
                     /translation="MNITKDLVPSIAYQVRTQEGVLVDEAPVNQPLEYLHGHNNLVEG
                     LEKALEGKAVGDVFEVRVKPEEGYGEYNDNMVQRVPKDVFMGVDELEVGMRFIADTDL
                     GPLPVVITEVDGDEVVVDGNHMLAGQELLFSVEVVGIREATAEEIAHGHVHGGHEHGC
                     GCGGHDHHHDHDGCCGGHDHDHHHHHGHGGCGCGGHH"
     gene            complement(9411..9551)
                     /locus_tag="PXD69_001023"
     CDS             complement(9411..9551)
                     /locus_tag="PXD69_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283234.1"
                     /translation="MKKLIKVCGLISATIFLSGCLVTSVVGGVVGTAVDVVDTVTPDI
                     ID"
     gene            complement(9623..10309)
                     /gene="aqpZ"
                     /locus_tag="PXD69_001024"
     CDS             complement(9623..10309)
                     /gene="aqpZ"
                     /locus_tag="PXD69_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HDL6283235.1"
                     /translation="MKKYFAEFFGTFWLVFGGCGSAVLAAGIPELGIGYAGVSLAFGL
                     TVLTMAYAVGHISGGHFNPAVSIGLLVGGRFNAKDLVPYIIAQVIGAIAAGAVLYTIA
                     SGVPTFDATAGFAGNGYGEHSPHGYSLTAALLIEVVLTAFFLIIIMGATDKRAPAGFA
                     PIAIGLALTLIHLISIPVTNTSVNPARSTGVALFQGSWAIEQLWLFWVAPIVGAIIGA
                     VVYRFIAEEK"
     gene            complement(10497..11216)
                     /locus_tag="PXD69_001025"
     CDS             complement(10497..11216)
                     /locus_tag="PXD69_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253715.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDL6283236.1"
                     /translation="MKLKNFLTILPLAVATAVTSAETHTVEHKDKPASFNFSTEVSRT
                     VEKDVMQASVYSQKSGNSLPELKKFVSENLNRVLAEAKKHPSIEVQAEGVTNHVNYNN
                     KGNIDGWDTSGSIQLKSKDFDAMAAVLENLGKDVAIRYIDFSVSPEKMASLEDEMTLE
                     IISKFQHKADVIQKALGAKTYKLVNINIQTPNDGGRPYYEHRAMYAVSSMAQSKSMDE
                     IPLEAGKTTISATASGSVEFE"
     gene            complement(11274..12011)
                     /gene="tsaA"
                     /locus_tag="PXD69_001026"
     CDS             complement(11274..12011)
                     /gene="tsaA"
                     /locus_tag="PXD69_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HDL6283237.1"
                     /translation="MNSTSNQLTPIQLNPIGFVESPYDEKFSVPRQPNLVAEGKGILR
                     LIPPYNTPDAVRGLEKFSHIWLIFQFHHIPEREWHATVRPPRLGGNERVGVFASRATH
                     RPNPLGLSKVKLEAVVAGGSEVYLKLGSVDLVNGTPIFDIKPYIAFADSEPQAVSGFA
                     QQKPQARLAVRFSEEAKQAVEFCRNFAKFGIEQPLSFLADVIAQDPRPAYQQGKPSER
                     VYGMNLAGYNIRWQIENDTQAIVLSIE"
     gene            12191..13099
                     /locus_tag="PXD69_001027"
     CDS             12191..13099
                     /locus_tag="PXD69_001027"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDL6283238.1"
                     /translation="MNKNSLFSIWFTTARPKTLPLALASIIVGSALAHWAGKFDVVTT
                     LLAFITTILLQILSNFANDYGDHVKGSDTKERIGPLRAIQHGVIGGEQLKKAVIILSL
                     LSFVSGVALSAYAFETVQDLFFFIGLGIVSIIAAITYTVGKKAYGYLGLGDLFVLIFF
                     GFVAVIGVFYLQAHSLPIMILLPAFGCGLLSVAVLNINNLRDINQDRQAGKNTLIVRI
                     GSQNGRKYHVALLVLAVISYLIFAISEFEHWYSFIFLLSVPLLAKHARFVYQHKDPKE
                     LYPILGQMAGLALLTNLLFSLGIVLG"
     gene            complement(13175..14161)
                     /locus_tag="PXD69_001028"
     CDS             complement(13175..14161)
                     /locus_tag="PXD69_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HDL6283239.1"
                     /translation="MKKSLLALLIGSVFLISACEDGKMTQTVLEAEKQIVQLGTELKN
                     AQADLAKKEAEVAELSGVKAENEKLKSELENAQQNTALNVEIVKIFDKKEVIKHQVDP
                     KQEFAIEESTVSAFVSLPKTNFDWLNQLLINQAYDYNEEQGRKLKNPTEEEFKKHREA
                     VYQGLVESVKTEPAIGYDDHISSAFIGQRNNIATFTMMHYTYMGGAHGMHYTQYINVD
                     LAKKAIIGLNDLISPKNQVQLKDILWENYSSVRVDENGNYNGFADKKEFRISDQFYFT
                     PHGIAFVYPPYELGAYAEGDIEVEADWYIINKLLNSEYQRGEKDGFFEELDN"
     gene            complement(14255..16126)
                     /gene="rpoD"
                     /locus_tag="PXD69_001029"
     CDS             complement(14255..16126)
                     /gene="rpoD"
                     /locus_tag="PXD69_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDL6283240.1"
                     /translation="MENQADQQLEQQSQLELLISQGREQGYLTLSEVHDHLPEELVDA
                     EQIEDIIQMINDMGIQVLEAAPDADDLLLAENIADEDVVEEATKVLSTVESELGRTTD
                     PVRMYMREMGTVELLTREGEIDIAKRIEEGINEVQCAIAEYPEALSGLLACYAQVETG
                     EMRLSDLVTAFVDPNILEEAPLEDIEAALGEDEESSDVPDVDDENEDENGDSSSDSSD
                     DSSIDPELAREKFEALRSQHEKVLLVIQKHGRTSKKSKEQIEILSHIFREFRLVPKQF
                     DLLVASMQKLMKQVRTEERQIQRYAVEYAGMKKADFLKAFQGHELSEAWIEKAINAKK
                     NAAPKLANYVDNIRVNIANLQNLEQTSGLTIAQIREIGGRISNGELKARRAKKEMVEA
                     NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
                     RSIADQARTIRIPVHMIETINKLNRISRQCLQEMGREATPEELAERMGMPEDKIRKVL
                     KIAKEPISMETPIGDDDDSHLGDFIQDESLELPLDSATAESLRMATNEVLEGLTPREA
                     KVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDD"
     gene            complement(16385..18133)
                     /gene="dnaG"
                     /locus_tag="PXD69_001030"
     CDS             complement(16385..18133)
                     /gene="dnaG"
                     /locus_tag="PXD69_001030"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL6283241.1"
                     /translation="MKGTIPRSFIDDLIARTDIVEVINSRVKLKKAGRDYQACCPFHH
                     EKTPSFSVSQSKQFYHCFGCGVHGNVITFLMDYDKLEFPEAIEELAAMHGLEVPRENV
                     IQRDGKPQANFKTKRNLYELMEAVAKFYQQNLSHQIEPQSYLQQRGLSEEIIERFEIG
                     FAPNAFDAALRTFGQSQEDIQKLLDTGVLTKNDSGRIYDKFRNRVMLPIRDKRGRVIA
                     FGGRVLPNDEQGAKYMNSPETVIYHKGSELYGLYQALKVNETPDYLFVVEGYMDVVAL
                     AQFGVDNAVASLGTATTGEQIQQMFRCTEQIVCCYDGDRAGRDAAWRALENALPYLQD
                     GRQLKFIFLPDGEDPDTFVRSQGKEGFEQYVAQNAKPLSDFLFDSLLADVDLSSKEGK
                     SKLAALAVPLINRIPGEMLRVYLRNILGQKLGILDPTQIEALLPTKKAAEKPLHQAVK
                     MKRTPMRLLIALLIQNPYFVKFVPDVSALASLKDPGFTLLTDIVATCQQNAGISMGGL
                     LEHYREDPQYKIVEALANWDHLELPENIERTFIDTLDFLYAKLVELRKEELIAKDRTV
                     GLTDDEKKEYALLMFQ"
     gene            complement(18287..18502)
                     /gene="rpsU"
                     /locus_tag="PXD69_001031"
     CDS             complement(18287..18502)
                     /gene="rpsU"
                     /locus_tag="PXD69_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDL6283242.1"
                     /translation="MPVIKVRENESFDVALRRFKRSCEKAGILAEVRAREFYEKPTTI
                     RKREKASLAKRHAKRNFRENARNTRLY"
     gene            complement(18650..19246)
                     /locus_tag="PXD69_001032"
     CDS             complement(18650..19246)
                     /locus_tag="PXD69_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HDL6283243.1"
                     /translation="MSLLPMNEITSLNQLDLQKSYSYADYLLWKFKERVEIIKGKIVA
                     MSPAPTRFHQRISMKMTAKFLEVFDNHQCQIYSAPFDVRFPDENGKVKTVVQPDLCVI
                     CDVSKLDERGCVGAPDLVVEILSPGNTKREMKDKYELYQEQGVKEYWIVSPETRTIQI
                     FVLENGKYIGIQPVAEDEPATSVVFPALSFSTEKLFEL"
     gene            19388..20644
                     /locus_tag="PXD69_001033"
     CDS             19388..20644
                     /locus_tag="PXD69_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDL6283244.1"
                     /translation="MHLNFKKIDNSHIALFYNVLVATFFVTVLTFKKGYSYVPMALGI
                     IATLSFLFYRFKLKQKWLLDKEDKFFIFSLIGYFLTFAMSAIFNGDGIREIDNPIQIL
                     LLIPLIILFRLYPIKKETVLHFIPIGALVAGCIAIYQRFILNLKFPFPEIMRIQSGNI
                     AILLSLFSIAIAFYWLSKKRIKTGIAYLVFAMFGLFASILTGARGGWLAFIPICFFIL
                     FLNLRQLNKKAIFLILLALISSLSFFISKPEFGIQKRYNAAKNDIIVFLEKGNRHSSL
                     GARFDMWENALIGIREKPLLGHGSTGYETFKKKQIETKQMAKTTLRFNSLHNQYLEAF
                     VKRGVVGFMALMAILIIPFVIFAKRLKAKNREVKCMAILGIVHIISHSFFFLSQSFLA
                     HNSGSLFYFFVLILLYHLVKQNEEII"
     gene            complement(20746..21753)
                     /gene="rfbB"
                     /locus_tag="PXD69_001034"
     CDS             complement(20746..21753)
                     /gene="rfbB"
                     /locus_tag="PXD69_001034"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDL6283245.1"
                     /translation="MIILITGGAGFIGSALVRYLIEHTPHTVINVDKLTYAGNLASLE
                     SVAHHERYHFEKADICASGQISEIFGKYQPDVVMHLAAESHVDRSISGAADFIQTNIV
                     GTYTLLEAARAYWDTLPEPRKSAFRFLHISTDEVYGDLAKSEELFTEKTPYNPSSPYS
                     ASKAASDHLARAWHRTYGLPTVITNCSNNYGAYQYPEKLIPLMILNALEGKSLPVYGN
                     GLQVRDWLFVEDHIRALYLVLQKGQIGETYNIGGHNEKTNIEVVRSICSILQEMVPNN
                     PLVVGQYADLITYVQDRPGHDFRYAIDTSKIEKELDWKPKETFESGLRKTVEWYLANR
                     N"
     gene            complement(21750..>22329)
                     /locus_tag="PXD69_001035"
     CDS             complement(21750..>22329)
                     /locus_tag="PXD69_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HDL6283246.1"
                     /translation="LEKIEKLIDEINKLHLAFSKDYFETGKIEKVNLKHTFAKVPTPH
                     ILAYRLNLHESINDYLYRADLEGISYFYRVKTSESILDKIERFKQRSEGYPVNSILND
                     IFGARIIVSSEVIQQVMESLDYWQEKYGLKNWYLRDKDEYVGIHIYFKNSSNFYYPWE
                     LQIWDKKDAEKNIQSHIKYKRNFVNQISYSPL"
BASE COUNT         6487 a         4881 c         4151 g         6810 t
ORIGIN      
        1 ctatatgata atcatcaaaa aatcgaggga atcattatga cagattttgc ttatcttcaa
       61 caaaagcgca aacagcttaa actcaaagtg aatgatattt gtgaacaagc tggggtaacc
      121 cgagcttatt ttaatcagtt agtaagcgga aaaatcaaaa atccaagcgc caataagctt
      181 aaagccttgc attccgtttt agatatcgta gaagatagca accagcgttc cggggttatt
      241 tttggcaaat tctatcctat tcacacaggt catattaata tgatctatga agcatttagt
      301 aaagtagatg ttttacatgt tattgtttgt accgattctg aacgggattt acgtcttttc
      361 caggaaagta aaatgaaacg aatgccgaca aatgaagatc ggctacgctg ggtacagcaa
      421 atttttaaat accaacaaaa acagatcttt attcaccatt tagttgaaga cggtattccg
      481 agctatccaa atggctggga agattggtct ggtcgtgtta aagcgctatt tgaagaaaaa
      541 agcattaatc ctactattgt ttttagtagt gaaattcaag ataaagaatc ttatgaaaaa
      601 tatttgaatc tagaagttca acttgtcgat cctactcgtg aatcctttaa tatttcagca
      661 acacaaattc gtaataatcc ttttcaatac tggcgcttta ttccgaaaga agttcgtcct
      721 ttctttgtta aaactattgc gattttaggt ggtgaaagca gtggtaaatc agtgttggtg
      781 agcaaattag cgaatgtatt taacactacc tctgcttggg aatatgggcg tgagtttgtg
      841 tttgagcaac ttggtggcaa tgaacaagca atgcaatatt ccgactatcc gcaaatggtg
      901 cttggacatc aacgctacgt tgattatgcc atgaaacatg ctcataaagt ggctattatt
      961 gataccgatt acatcacaac tcaagcgttc tgtattcagt atgaagggaa ggctcacccg
     1021 tttctggatt caatgatccg cgaatatcct tttgatgtga cgattttact ttctaacaat
     1081 acaaaatggg tagccgatgg tttacgcagt ttaggatcga aaaaacagcg tcaacagttt
     1141 caacacctac tgaaaaaact actagaaaaa caccatattc cttatattaa aattgaatct
     1201 ccaagttatt tggatcgcta caatcaagcc aaagaggtgg tagaagctat tttaaatgaa
     1261 gaaccaatcc cattacagtt taagcaatat aatattcacg aatttgaata actgccacag
     1321 gaaataacat gatacttttt gcaggcgatc cacacggtag ctacgagcat ctttatccga
     1381 ttctacaaca gcagacggag gaggtagctt tagttattct aggcgatctt caattgacta
     1441 ctcctgatga attagatcgg ctttcgcagt attgtgatat ttggtttatt catggtaacc
     1501 atgacagtaa aaccgttgct gcctttgatg ctatttggaa tagtagctgg aaagaacgca
     1561 atattcacgg taaagtagtt gacattcaag gaataaaaat tgcaggtatt ggaggggtct
     1621 tccgaggtca tatttggatg ccgcccaatc gtccaatgtt ttttgatccc atccattttt
     1681 gccaatactc tgctccggaa aaaatttggc gtggtggtat tccattaagg caccgctctt
     1741 cgatcttccc ttctgatttt gaagcattgg aaaatgaaaa agccgatatt ttaattacac
     1801 acgaagcacc aaagccacac cctcaaggct tctctgtaat caaccagcta gcaagaaaat
     1861 taggggcgag caaaattttc catggccact accatgataa ttttaattat ggcaatctaa
     1921 atgtcagcag agaatgtgct atttataata tcggctttcg tagcctagcg gatattaatg
     1981 gaaattatct aattttaggt gttgatgatc gagagaaata gccaaaaatt tgactgaatt
     2041 aaacaaattg tcattttacc cttcccattc ataaatttat aagtaaaatg cgagaaattt
     2101 gtaacataaa cgttattaaa cagaatttat aaattaaatc agaggtttaa aagatgaaga
     2161 tcccacaaat cttaattgtt gaggatgagt tagtaacaag gaatatgctg aaaagcattt
     2221 ttgaaggaga aggatatcag gtatttcaag catctaacgg cgaggaaatg cactctgttc
     2281 tgagtacaaa tgaaatcaat cttgtgctaa tggacattaa cttaccggga aaaaatggat
     2341 taattctcgc ccgagaaatt cgagagaata tgaagctacc attaatgttt ttaaccggtc
     2401 gcgacaatga aattgataag atcctcggtt tagaaatagg tgccgatgac tatatcacta
     2461 aaccgtttaa tcctcgagaa ttgactatcc gagcgagaaa tttattgcaa cgaacgatga
     2521 tagataaaga aaacgacgtt gtaaaagagc aatctgaaat tgaaagctat cgctttaacg
     2581 gttggatctt agacattaac agtcatagtt taatctcacc agaaggtgag gtaaataaat
     2641 taccacgtag tgaatttagg gctttattac atttttgcca acatcctgga aaaattcaaa
     2701 cacgtgaaga tttattgaaa aaaatgaccg ggcgggaact aaaacctcat gatagaaccg
     2761 ttgatgttac tattcgccgt attcgtaaac attttgaaga ccaccccaat accccagaaa
     2821 ttattgtcac cattcacggt gaaggctacc gtttctgtgg taacatcgaa ccttaatcaa
     2881 gataggagta attttatgaa aaaattaact attgtcgcat taacttgctt attttctacc
     2941 catctattag ccgctcctgt cggaaataca tttactggca tcggtgtcgg tgtagatgta
     3001 actacaacaa aatacaaagt tgaaggagta aaaggcaagg attccacagg tccggcatta
     3061 gttgtcgatt atggtattga gcaaggcaat aactttgtag gcgttgtaca aggaaaagca
     3121 aaagtaggta gtacaaaagt atttagcgat gtaaaacaaa aaaataaata tactatagct
     3181 tatcaacaag gttatcgtgt tggatccgat ttattacctt atgtaaaagt agatgccagc
     3241 tcaagcaaaa tcggtaatga aacctatcgt ggctttggtt tcggtgctgg tgcaaaatat
     3301 gcagtttcaa gcgatgttga attaggtgca gaatacactc gcgataattt aaaacgtagc
     3361 ggcacaaaat taaaaggtaa cgctttcacc gcgaatgcaa cttatcgttt ctaatcttag
     3421 cggtaaagtt ttctgaaaaa ataaccgctt gtaacacaaa agagcctgaa gtgattcagg
     3481 ctctttgcct tttaatataa tactcgggct cgaatcgtgc cttcgatcgc ttttaaacgt
     3541 tgtaatgctt catcaacatt gtcgctctct acatcaatta caacataacc gatagctgca
     3601 tcggtttgta aatattgagc ggcaatattc acatttgatt ccacaaaaat ctggttaatt
     3661 tgatttaaca tacctgggcg attctcgtga atatgtaata aacgtttggt attagtatga
     3721 agcggtaagg atacttcagg gaaattcact gccgtcacgg ttgaaccgtt atctgaatat
     3781 ttcacaaatt tattggcaac ttcggtgccg atatttgcct gagcttcaga ggttgaacca
     3841 ccaatatgtg gcgttaaaat cacgttatca aacttgcaca atggtgacac gaacgggtca
     3901 ttaattgatg ccggttcttc cggaaatacg tcaatcgccg caccacgcaa tgagccgtct
     3961 tcaatccgag cggctaatgc gtctaaatcg accactgtac cacgagcggc attaattaac
     4021 accgagcctt cttttaattg agcaatgcgt tctgcactca ttaggttttt agtcgagtcg
     4081 atttccggaa cgtgtagtga aatcatatcg caggttgaaa gcaaatgctc taatgtcggc
     4141 acttgctgtg cattaccgag tggtagtttg ttttcaacat catagaaata aacctgcata
     4201 ccaatggctt cggcaagaat actaagctgt gaaccgatat gaccatatcc cacaatacct
     4261 aatttcttgc cacgtacttc gtttgcacct gctgccgatt tattccacac cccacgatgc
     4321 acttccgcat ttgcagtcgg gactttacgc attaataaaa tcatctctgc cagcactaat
     4381 tctgccaccg agcgggtatt tgagaacggt gcattgaata ccggaatacc tcgtcttttc
     4441 gccgcattca aatcaacttg gtttgtaccg atacagaaac aaccaatcgc aattaatttc
     4501 ggagcttgag ccagtacttc ttcggttaaa aaagtacgcg agcgaatacc aacaaagtgt
     4561 gcatctttaa ttgcatcaat taattcttga ccgtctaatg cttttttatg cacttcaata
     4621 ttggtataac cagccgctaa gagtacatca attgcgtttt gatgtacgcc ctcaagcaga
     4681 aggaatttga tcttggattt atccaaagaa attttagcca ttttttgctc ctaagtattt
     4741 gtatttgcaa taataaatta ttctaaaata actgcacctt caggtgtgcc gacaatggtt
     4801 acattggcaa aacgttgtgc aaaaataccg ttagtcacca cgcctgcaat attattaatg
     4861 gtatgttcca ttttcaacgg ctccataatt ttaaagttat gtacatctaa aatcacattg
     4921 ccgttatcag tgaccacgcc ctcacggtat tccggcgaac cacctaaggc tacgagctga
     4981 cgagccacat aagaacgagc cattgggatc acctccaccg gcagagggaa agttgaaccc
     5041 agcacatcaa cttgtttgga tttatccaca atgcagataa attttttcgc taatgaactc
     5101 acgattttct cacgggtaag tgctgccccg ccacctttaa tcatcgcccc ttgtggcgtg
     5161 atttcatcag ctccgtcaat atacacatct aattccgtca cttcattggc actgaatact
     5221 tcaatgccga tatcacgcaa acgctgttcc gaggctttag aggcagcaac cgctccttta
     5281 atctcatctt tcattgaagc aagggcatca ataaaacagt ttacggttga accacttccc
     5341 accccaacaa tagtgtccgg ttttacaaat tttaatgcag cttgtgccgc aatttttttc
     5401 atttcttgtt gatccatttt tacctccact tgtagggcaa atcatcattt gcccacttcg
     5461 gcaaggcgaa aaaaattttc gccctactac atctattcta cacatatatg taacaagcgg
     5521 tcatatttgg caaatttttt accaaaaacg accgcttgtc attagttacg ttttactgct
     5581 tcaacaatct cttccgcaca gctttgagca agtacagcat cttcgcactc caccatcact
     5641 cgaattaatg gctcagtgcc tgatttacgc aataaaatac gccctttgcc tgccaagcgt
     5701 ttttccacat ctgccgctac cgctttcact tcgttacttt caagcggatt tgccgcccct
     5761 ttctcaaagc gaacatttag cagaacttgc gggaacagag gcactgcttt tgccaaatca
     5821 ttcaggctta atttgtggct tgccattgct gctaatactt gcagtgaggc aataatacca
     5881 tcaccggtgg tgtttttatc taacacgata atatgcccgg agttttcgcc acccagtttc
     5941 cagccttttt ctttaagctg ctctagtaca tagcggtcac ccacgttagc acgagagaat
     6001 ggaatggcta gctcttttaa agctaattcc aagctcatat tactcattaa tgtaccgact
     6061 acaccgcctt gtaatttgcc tgaacgtaga gcttctcggg ctaaaataaa tagaatttgg
     6121 tcgccatcaa ctttattgcc taagtgatcg accataatca aacggtcgcc atcaccatcg
     6181 taagctagac caacatccgc acctgcttct accaccactt tttgaagtgc tttaatatcc
     6241 gttgcaccac atttttcgtt gatgtttaaa ccgtccggct tagtaccgat ttcaagcact
     6301 tctgccccta gctcacgcat tacattcggc gcgatatggt aggttgcacc gttggcacaa
     6361 tccaccacaa ttttatagcc ttcaaggctt agttcagacg ggaaagtgcc tttacaaaac
     6421 tcgatataac gtcctgcggc atcattaata cgactggcac gacctaaatt tgctgaatct
     6481 acgcaatcca taggcttatc aagcattgct tcaatcgctt cttcaatttc atcaggtagt
     6541 ttttcaccaa ccgacgagaa gaatttaatg ccgttatcgt aataaggatt gtgagaggca
     6601 gaaatcacaa tgccggcttc cgcacggaaa gtacgggtta aataagcaat tgccggagtc
     6661 ggcatcggac caacgaatac tgctgataaa ccggctgcgg ttaaaccggc ttccagagcc
     6721 gattccaaca tataaccgga aatacgggta tctttaccga ttaatacttt tttcgtgcct
     6781 tgggttgcca acactttacc tgctgcccaa ccgagtttta atgcaaattc aggtgtaatt
     6841 ggaaatttac ctacttcacc acgcacaccg tctgtgccga aatatttacg agccattcta
     6901 attcctaaga ttgataaaaa tttactttaa aaaatattga tatgccggac tttcgctcac
     6961 attttggaag cggtaaccta gctgttctaa atgtcggttt aattctactt catcgcctct
     7021 gtttaatgca aatgcggcaa gaatatcgcc ataatcggct ccgtgagctc ggtaatggaa
     7081 taacgagata tcccagttag tcagcatttg taagaatttt agcaatgccc ctttctgctc
     7141 tggaaattca aagctataga gttgctcata ttgaatggag cttgctctac cgcctaccat
     7201 ataacgaata tgggttttgg caatatcatc gtccgataaa tctgccacat catagccgtt
     7261 ttgttgcaga tctttaataa tctctacttt ttctgccgag cctgaaattc gcacccccac
     7321 aaaaatacag gcttgtttat catcggaatg gcgatagtta aattccgtta ccgcacggtt
     7381 gcctaaaatc tcgcagaatt ttaagaaact acctttctgt tcagcaatgg tgactgccaa
     7441 taaagcttca cgtttctccc cgatttcaca acgctctgac acaaaacgta aggtgtggaa
     7501 attcacattc gccccggaaa gaatgcaagc taagttttta tcttgtaatt gatgctcttt
     7561 cacatatttt ttcaaaccgg caagggaagt tgccccggac ggctcggaaa tcgcacgcac
     7621 attttcaaaa atcaacttca ttgaggcaca gatttcatca ttatccacca acaccacatc
     7681 atcaacatat tgctgacaca ggcggaaagt ttcatcgcca atgcgtttta ccgcaatacc
     7741 gtcagcaaaa agcccaaccc gttctaaatc ggtcggttgc ccttgcttta aggcgtgata
     7801 taagcaagca gaatctttag attcgacccc aatcacttta atattcggca tcacctgctt
     7861 aattaaaacc gcaatgccgg caattaagcc gccaccgccc actggaataa atacataatc
     7921 taaatccggc ttttgttgca ccagttctaa gccgattgtg ccttgccctg caatcactgc
     7981 cgggctgtca aacgggtgaa tgaaggtcat acccaattcg gtggaaagct caatcgcttt
     8041 cgccttagct tcatcaaaat tcgccccata aagcaacact tcaccaccat agccacgtac
     8101 cgcatcaacc ttaattgccg gtgtgttttg cggcattaca atcaaggctc ttaaacctaa
     8161 atgtttggca gaaagtgcca ccccttgtgc gtggttgcct gctgaagccg caatgactcc
     8221 agcctctttt tgtgctttgg ataaatttga gatcatcgca aaagcacctc gcaatttaaa
     8281 gctgtgaacc ggctgtcggt cttcacgttt gataaaaata gagttgccta accgctcaga
     8341 cagtttttcc attttctgta aaggggtcac ttgcgctaag tcataaatat ttgagcttaa
     8401 aatcgagcgt aaatagtcga tagcggattg ggaatgttgt gtttcgttca tcattttgaa
     8461 aggttattta ttgttagatt gagataaaga cattggtaaa tttccaagga aaattgaccg
     8521 cttgtttggt tatttagcaa tggctttaac agggaatatt tcctctcgcc cgtttgcggg
     8581 agagagacag cttaaaattt cgttcagaaa ttttaagcag agagagggga aaccttggat
     8641 atccccctct ccctccgcaa atcttcgatt tgctccaccc tctcccgcaa gcggggagag
     8701 gggaaatcac aaagttagtg atgaccaccg caaccacagc caccgtgtcc gtgatgatgg
     8761 tgatgatcgt ggtcgtgacc gccgcagcaa ccatcgtgat cgtgatgatg atcgtgccca
     8821 ccacaaccgc aaccgtgttc gtgtccgccg tgaacgtgtc cgtgtgcgat ttcttccgct
     8881 gtcgcttcac gaatgccaac cacttccaca gagaaaagta attcctgacc ggctaacata
     8941 tggttaccgt ccaccacaac ttcatcgcca tctacttcgg taattaccac cggtagcgga
     9001 cctaaatccg tgtccgcaat aaaacgcata cccacttcta attcatcgac gcccataaat
     9061 acatctttcg gtacacgttg aaccatatta tcgttgtact cgccgtaacc ttcttccggt
     9121 ttcacacgca cttcaaacac atcgcctaca gctttgcctt caagggcttt ttctaagcct
     9181 tctaccaagt tgttgtgacc gtgtaaatat tctaacggtt ggtttaccgg tgcttcatct
     9241 actaatacgc cttcttgagt acgcacttga tatgcaatgc ttggcactaa atcttttgta
     9301 atgttcatat tgaatccttt aattcatcgg ttttataaaa tagcaagcca ttgtaacgct
     9361 ttattttata tttgcaatct atctggaaat tttaaccgct tgtcagtaaa ttagtcgata
     9421 atatcagggg ttacggtgtc taccacatca actgcggttc ccaccactcc accaaccacc
     9481 gaagttacca aacaaccact taggaaaata gttgctgaaa tcagcccaca tactttgatt
     9541 aattttttca ttttaaaatc ctttcaaaaa caaaaaacag ccctaatcaa gactagagct
     9601 gcatcatatt tattcgctta aattattttt cttcagcgat aaagcgataa actaccgcac
     9661 cgataattgc accgacaatc ggagcaaccc agaacaacca taattgctca atcgcccagc
     9721 tgccttggaa taacgctaca ccggttgaac gtgccgggtt tactgaggta ttggttaccg
     9781 gaatgctgat taagtggatt aaggttaaag ccaaaccaat agcaatcgga gcgaaacctg
     9841 ctggagcacg tttatcggtt gcacccataa tgatgattaa gaagaatgcc gttaatacca
     9901 cttcaattaa taatgctgct gttaagctat agccgtgtgg cgaatgctca ccataaccgt
     9961 tgccggcaaa gcctgctgta gcatcaaaag tcggaacacc tgaagcaatg gtgtataaca
    10021 ctgcaccggc agcaatcgca ccgattactt gggcaatgat ataaggcact aaatctttag
    10081 cgttaaaacg accgccgact aataaaccga ttgaaaccgc cgggttgaag tgaccacctg
    10141 aaatatgacc gactgcatac gccattgtta atacggttaa accgaaggct aacgaaacgc
    10201 ctgcataacc gattcctaat tcaggaatgc ctgctgctaa aactgcactg ccgcaaccac
    10261 caaacactaa ccaaaatgtc ccgaaaaact cagcaaaata ttttttcatt ttttatcctt
    10321 accctaaagg gtgaatcaca cataagtgta ttaactttcc gaatgctata aaacatagcc
    10381 aataaaatat gagtatacta aaaaaagtaa agacgcatat ttcttaattg atagtataga
    10441 ccgatttttt cctccaatta aagtaaaaat acaactctat acaaatctat acatttctat
    10501 tcaaattcca cacttcctga agcggtagct gaaattgtgg ttttacctgc ttctaacggg
    10561 atttcatcca tagatttgct ttgtgccatt gatgaaactg catacattgc tctgtgttca
    10621 taatatggtc taccaccatc atttggagtt tgaatattga tattaactag cttatatgtt
    10681 ttcgccccta aggctttttg aatcacatcg gctttatgct gaaatttgct gataatttcc
    10741 agcgtcattt catcttcaag ggacgccatt ttctctggcg atacactaaa atcaatgtaa
    10801 cgaatcgcca catctttacc taaattttcc aacaccgctg ccattgcatc aaaatctttg
    10861 cttttcaact gaatgctacc agaggtatcc caaccatcaa tattcccttt gttgttataa
    10921 ttaacgtgat tagtcacacc ttcagcttgt acttcaatcg atggatgttt ttttgcctca
    10981 gccaatacac gattcaggtt ttcagataca aattttttca gctccggcaa ggagttacct
    11041 gatttttggc tatacacact tgcctgcatc acgtcctttt ccaccgtgcg agagacttcg
    11101 gttgagaaat taaaagaagc cggtttatct ttatgttcca cggtatgagt ttccgctgaa
    11161 gttaccgctg ttgcgactgc aagcggtaga atggtaagaa aatttttcaa tttcataatc
    11221 agtccttaaa agggttaaaa atcatttctt agatctcact tgcgtaggaa agttcattca
    11281 atcgaaagca caatcgcctg tgtatcattt tcaatttgcc agcgaatatt gtagccggca
    11341 aggttcatac cataaactcg ctcactaggt ttcccttgtt gatacgccgg gcgagggtct
    11401 tgggcgatga catcggcaag aaaactaagc ggctgttcga tgccaaattt tgcaaaattt
    11461 cggcaaaatt cgacagcttg ttttgcctcc tcgctaaaac gcaccgctaa tcttgcttgt
    11521 ggtttttgct gagcaaaacc ggaaaccgct tgcggctcgc tatctgcaaa tgcaatgtaa
    11581 ggcttgatgt caaaaattgg tgtgccgtta actaaatcca cgctgcctaa tttcaaataa
    11641 acttcactcc cccccgccac taccgcttct aacttcactt tcgataagcc aagcggattc
    11701 ggacgatggg tggcacggct ggcaaagacc ccgacccgtt cgttcccgcc caagcgaggc
    11761 ggtctgacgg tggcgtgcca ctctctttcg ggaatgtgat ggaattggaa aatcaaccaa
    11821 atatgactaa atttctccaa gcctctgact gcatcggggg tattgtaagg cggaattaaa
    11881 cgtagaatgc ctttcccctc cgctaccaaa ttcggctggc gaggcacgga aaatttttca
    11941 tcataggggc tttccacaaa accgataggg tttaattgaa tcggggttag ttgatttgag
    12001 gtagagttca ttacgctttt ttctgttaaa ataatataaa atattggaca taatgatatg
    12061 aaattgagga tggtgcaagc gtccacgctt gtaccaattc gttttaccat ttaacacaag
    12121 agtggacgct tgcactatcg cttaaatcct taacatcatt gtaaatgaaa ttacgctaag
    12181 attattctct atgaacaaaa attctctctt ttcgatttgg tttaccaccg ctcgcccgaa
    12241 aactttaccg ctggcgttag cttcaattat tgtgggttca gcacttgctc attgggcagg
    12301 gaaatttgat gttgttacca ccttactcgc atttatcacc accattttgt tgcagatcct
    12361 gtctaacttc gccaatgatt acggcgacca cgtcaaaggc tctgacacca aagaacgaat
    12421 cggaccgcta cgggcgattc aacacggtgt tattggcggt gaacaactta agaaagccgt
    12481 gattatctta agcctactct cgtttgtttc cggtgttgcc ttaagtgcct atgcttttga
    12541 aacagtgcag gatctgtttt tctttatcgg gcttggcatc gtctcaatta ttgccgccat
    12601 tacttacacc gtcggcaaaa aagcctacgg ctatttgggg ctgggcgatc tatttgtgct
    12661 gattttcttt ggctttgtag cggtaatcgg cgtgttctac ttgcaggctc atagcctacc
    12721 tataatgatt ctgctccctg ctttcggttg cggattgctg tctgtagcag tgttaaatat
    12781 caataacttg cgtgatatta accaagaccg acaagctggg aaaaacactc tcattgtacg
    12841 aatcggtagc caaaacgggc gaaaatacca cgttgcattg ttagtgctag cggtcatttc
    12901 ttatctgatt tttgcaattt ctgaatttga acattggtat agcttcattt ttttgctgtc
    12961 tgtaccgtta ctggcaaaac acgctcgttt tgtctatcag cataaagacc caaaagaact
    13021 ctacccaatt ctagggcaaa tggcagggct ggcgttgctc actaatctat tatttagttt
    13081 gggcattgtg ttagggtaag ttgcaaaatt ttaacaaaac taaaccgctt gtaataaagg
    13141 attacaagcg gttgtttttt atctaaattt acaattagtt atctagttct tcaaagaatc
    13201 catctttttc gccacgttga tactccgaat tgagcaactt attaataatg taccaatccg
    13261 cttcaacctc tatatcgcct tctgcataag cacctaattc gtatggcgga taaacaaaag
    13321 caatgccgtg aggggtaaag tagaattggt cagaaatacg gaactctttt ttatcagcaa
    13381 atccattata gttgccattt tcatccacac gcacgctact gtaattttcc caaagaatgt
    13441 ctttcagttg aacttgattt tttgggctga ttaaatcatt taagccaatg attgcttttt
    13501 tagctaaatc tacattgata tattgcgtat agtgcatacc gtgagcccca cccatatagg
    13561 tgtaatgcat catagtgaat gtagcaatat tattgcgttg cccgataaaa gcactggaaa
    13621 tatgatcatc atagccaata gctggctcgg ttttcacact ttctaccaac ccttgataaa
    13681 ccgcttcacg atgcttttta aactcttctt cggttggatt tttcagcttt ctgccttgtt
    13741 cttcattgta atcataggcc tgattaatca aaagctggtt aagccaatca aaattggttt
    13801 ttggtagaga cacaaacgca cttactgtac tttcttctat tgcaaattct tgtttcggat
    13861 caacttggtg cttaatcacc tctttcttat caaagatttt cacaatttca acatttaacg
    13921 ctgtgttttg ctgagcgttc tctaactctg attttaattt ttcattttct gctttcaccc
    13981 ctgaaagttc tgcaacttca gcctcttttt ttgctaaatc agcctgagca ttttttaatt
    14041 ctgtgcctaa ctgaacaatt tgtttttcgg cttctaatac cgtttgggtc attttgccgt
    14101 cttcacaagc tgaaatcaga aatactgagc caattaaaag tgctaatagt gattttttca
    14161 tctctccctc ttttgtaaaa aatacggtaa atatcaccgc ttgttataca gattaaaaca
    14221 aaatccccta taccatcagg cataggggaa atgattagtc gtctaagaaa ctgcgtaagg
    14281 tttccgaacg gctcgggtgg cgaagtttgc gcagtgcttt cgcctcaatt tggcggatac
    14341 gttcacgagt tacgtcaaat tgtttaccaa cttcttcgag tgtgtggtct gtgttcatat
    14401 caataccaaa acgcatacgc aacactttcg cttcacgcgg ggttaagccc tctaacactt
    14461 cgttcgttgc catacgcagg ctctccgcag tggcggaatc caatggtaat tcaaggcttt
    14521 cgtcttgaat gaaatcacct aaatgtgaat cgtcatcgtc accgattggt gtttccattg
    14581 aaatcggctc tttggcaatt ttcaatactt tgcggatttt atcttccggc attcccatac
    14641 gttctgccag ttcttccggc gttgcctcac gccccatttc ttgtaaacat tggcgtgaaa
    14701 tacggttgag tttgttgata gtttcaatca tatgcaccgg aatacgaatt gtacgggctt
    14761 ggtcagcaat cgaacgggta atcgcttgac gaatccacca agttgcataa gtcgagaatt
    14821 tataaccacg gcggtattca aatttatcca ccgctttcat taaaccgatg tttccttctt
    14881 ggattaaatc taagaactgc aagccacggt tagtgtattt tttcgcaatc gaaatcacca
    14941 aacgtaagtt agcttccacc atctcttttt tcgcacggcg ggcttttaac tcaccattgg
    15001 aaatacgccc gccaatttca cgaatttgag caatggttaa gcctgatgtt tgctctaaat
    15061 tctgtaagtt agcaatattg acacggatat tatccacata attagctaat ttcggtgctg
    15121 catttttctt ggcattaatc gctttttcaa tccacgcttc gcttaattcg tgcccttgga
    15181 atgctttcaa gaaatccgct tttttcatgc cggcatattc cactgcatag cgttgaattt
    15241 gacgttcttc agtgcgaacc tgcttcatca gtttttgcat agaagcaacc aataagtcaa
    15301 attgcttcgg caccaaacgg aattcacgga aaatatgaga taaaatttca atttgctctt
    15361 tcgatttttt actggttcgc ccgtgttttt gaatgaccaa taacactttt tcatgttggc
    15421 tgcgtagggc ttcaaatttt tcacgggcaa gttccgggtc aattgagctg tcatcactgc
    15481 tgtctgaact gctatcaccg ttttcatctt cgttttcgtc atctacatca ggcacatcag
    15541 aagattcttc atcttcacct aaagcagcct caatatcctc taacggtgct tcttctaaaa
    15601 tattaggatc gacaaatgct gtcactaaat cagaaaggcg catttcaccg gtttcgactt
    15661 gagcatagca ggctaacagg ccacttaagg cttccggata ttccgcaatc gcacattgaa
    15721 cttcgttaat cccttcttca atgcgtttag cgatatcaat ctcaccttca cgggttaaaa
    15781 gctcaactgt ccccatctca cgcatataca tacgcacagg gtcagtagtt ctacctaact
    15841 ctgattctac ggttgaaagc actttggtgg cttcttctac cacatcttca tcggcgatat
    15901 tttcagcgag tagtaaatca tccgcatcag gggcagcctc taaaacttgg atacccatat
    15961 cgttgatcat ctgaataata tcttcgatct gctccgcatc caccaactct tccggtaagt
    16021 ggtcgtgcac ttcagaaagc gttaaatatc cctgttcacg cccttgactg atcagaagtt
    16081 ctaattgaga ttgctgttct aattgttgat ctgcttggtt ttccatagtc tatccgttta
    16141 ttatgcgagc aaaaatagta gtggattata ccactaaatt tggttcgact tcataaattc
    16201 acaaaaaaat tctatttttc taatttacac attactttga tgcttatgag aacagagagg
    16261 tgtagcaaga gagataaata actttctttt tagatagaat taattatttt cttcgttcat
    16321 cacttctgcc aaatctcccc taacccctct ttgctaaaga ggggaattat tcgagcttaa
    16381 aattctactg aaacatcaaa agagcatact cttttttctc atcatcggtt aagcccacgg
    16441 ttcggtcttt ggcaattagc tcttctttgc gtaattccac taatttggcg tagagaaaat
    16501 cgagagtgtc aataaatgtt cgttcgatat tttcgggtaa ctctaaatga tcccaatttg
    16561 cgagggcttc aacaatctta tattggggat cttcccgata atgttcaagt agcccgccca
    16621 tactgatacc tgcattttgc tgacaagttg cgacaatatc ggttaataat gtaaagccag
    16681 gatctttcaa ggaggctaaa gcacttacat cgggtacgaa tttcacaaaa tacggatttt
    16741 gaatcaataa cgcaatcaac agccgcattg gcgtacgttt cattttgacc gcttgatgta
    16801 aaggcttctc tgccgctttt ttcgtcggta acagagcttc tatctgcgtt gggtctaaaa
    16861 tgcctaattt ctgtcctaaa atattgcgta aatacactcg cagcatctcg cccggaatac
    16921 gattaattaa cggcacagct aaagcagcga gcttggattt tccctctttt gaagagagat
    16981 ccacatccgc cagcaaactg tcaaataaga aatcgcttaa tggcttggca ttctgtgcca
    17041 cgtactgctc aaatccttct ttaccttgag aacgaacaaa ggtgtccggg tcttcgccat
    17101 cgggcaagaa aataaatttc agttggcgac cgtcttgcaa ataaggcaac gcattttcta
    17161 acgcccgcca agctgcatct cgaccggctc tatcgccatc ataacaacag acaatttgct
    17221 cggtgcaacg aaacatttgc tgaatttgtt caccggtagt tgccgtgcct aaagaggcga
    17281 ctgcattgtc cacgccgaat tgggcaaggg cgaccacgtc catatagcct tccaccacga
    17341 acagataatc cggcgtttca ttgactttca gtgcttgata caagccatat aactcactgc
    17401 ctttatgata aatcaccgtt tcgggcgagt tcatatattt cgccccttgc tcatcattcg
    17461 gcaacacccg cccaccaaag gcaattaccc gtccacgctt atctcgaatc ggtaacatta
    17521 cccgattgcg aaatttatcg taaattcgac cgctatcatt tttggttaaa acgcccgtat
    17581 cgagcaattt ctgaatatct tcttgtgatt gcccaaaagt gcgtagggct gcatcaaagg
    17641 cattcggagc aaaaccaatt tcaaagcgtt cgataatctc ttcagacaaa cctcgttgct
    17701 gtaaatagct ttgtggctca atctggtgcg ataaattctg ctggtagaac ttcgccaccg
    17761 cttccatcaa ttcataaaga ttacgcttag ttttaaaatt agcttgaggc ttgccgtcac
    17821 gttgaatcac attctctctc ggtacttcca gcccgtgcat agctgccagt tcttcaatcg
    17881 cttccggaaa ttcgagtttg tcataatcca tcaaaaaggt gatgacattg ccgtgtacgc
    17941 cacagccgaa acaatggtaa aactgttttg attggcttac cgaaaaggaa ggggttttct
    18001 cgtgatgaaa aggacagcag gcttgataat ctcgcccagc ctttttgagt ttgacccgac
    18061 tgttgatgac ctcaacaata tcggtgcgag cgataagatc atcaataaat gaacgtggaa
    18121 ttgtgccttt cattgatttc ctcctgctct ttgaatgata caagcggagc aattttgcaa
    18181 attttttgca aaaaacaacc gcttgaaata gaaacgttaa aaacaccaaa accgtgagcc
    18241 taacggaatc acggtttcga tatagtttgc taaccagcct aactaattag tataaacgtg
    18301 tgttacgtgc gttctcacgg aaattacgtt tagcgtgacg tttagcaagt gatgcttttt
    18361 cacgtttacg aattgtagtt ggtttttcgt agaattcacg agcacgaact tcagctaaga
    18421 tacccgcttt ttcgcaagag cgtttgaaac gacgtaatgc tacgtcaaat gattcatttt
    18481 cacgaacttt aattactggc atatgccatc acctcagaaa aatatgatta aattaaaccg
    18541 cacacaattt tggcggcata gaacaaaaaa ggtagtgcat tctaccttaa gcactcacat
    18601 aagtaaagta gtattgtggc ataaaaccgc cgtattatgt tgcatttttc tacagttcga
    18661 ataatttctc ggtcgaaaaa cttaatgccg gaaagaccac cgaagttgcc ggttcatctt
    18721 ctgccaccgg ctgaataccg atatatttac cgttttccaa cacaaaaatc tgaatagtgc
    18781 gggtttcggg agaaacaatc caatactctt tcaccccttg ttcctggtaa agctcgtatt
    18841 tatctttcat ctcccttttg gtattacccg gagaaaggat ttccaccact aaatccggtg
    18901 cccctacaca gcctctttca tctaacttac tgacatcaca aattacacaa agatcaggct
    18961 gcactacagt tttgactttt ccgttttcat cgggaaaccg aacgtcaaaa ggcgcagaat
    19021 aaatctggca ttggtgattg tcaaaaacct ctaaaaattt tgctgtcatc ttcatagaaa
    19081 ttcgctgatg aaaacgagta ggagccggag acatcgccac aattttccct ttgataatct
    19141 caacccgctc tttaaatttc catagcaaat aatcagcgta actgtaactt ttttgtaagt
    19201 ccagttgatt taagctggta atttcgttca ttggtaataa gctcataccg cctcctttat
    19261 cagaaatata aagatattat gccgaataat ccctcaaatt caacaaaact ttcgctaaaa
    19321 agagatagat aacctttata cccttagtat aaaatgacag caattttcat tgttttagga
    19381 tatgtcgatg caccttaact tcaaaaaaat agacaactca catattgctc ttttctataa
    19441 tgtactagtc gccacatttt ttgtcactgt tttaaccttt aagaaaggtt atagttatgt
    19501 gccaatggca ttaggtatta tcgctacact tagtttctta ttttatcgtt tcaaattaaa
    19561 acaaaagtgg ttacttgata aagaggataa attttttatt ttctcgctta ttggctattt
    19621 tctaacgttt gcaatgtctg ctatttttaa tggcgatggc attcgtgaaa ttgataatcc
    19681 tatccagatt ttattgctta tccctttaat catcctcttt agactttacc cgattaaaaa
    19741 agaaactgta ttgcacttta taccgattgg agcgttggta gctggttgta tagcaatata
    19801 tcagaggttt atattaaatc ttaaatttcc tttccctgaa ataatgcgta ttcaatcggg
    19861 gaacatagca atattattat cactatttag tatagcaatt gccttttatt ggctttcaaa
    19921 aaaaagaatt aaaactggca ttgcctacct ggtttttgcc atgtttgggt tatttgccag
    19981 tattctaaca ggagcaagag gcggctggct tgcattcatt cccatttgct tttttatcct
    20041 atttttaaat ttaagacagc taaataagaa agctattttc ctgattctat tagcacttat
    20101 atcttcactc tcatttttta tctccaaacc agaatttggc atacaaaaac gatataatgc
    20161 agctaagaat gatattatcg tatttttaga aaaaggaaat agacattcat ctctgggagc
    20221 tcgttttgat atgtgggaaa atgcgcttat cggaatccgt gaaaaaccgc tattaggaca
    20281 cggtagcaca ggctatgaaa cattcaaaaa gaaacagatt gaaacaaaac aaatggcaaa
    20341 aacaacgctt aggtttaata gcttacacaa ccaataccta gaagcctttg tgaaaagagg
    20401 tgtagttggt tttatggcgc taatggctat tttaattatt ccatttgtta tttttgccaa
    20461 acgattaaag gcaaaaaata gagaggtaaa atgtatggcg atattaggca ttgtacatat
    20521 tatttcgcat tcattctttt tcctaagcca atcattttta gcccataatt caggctcatt
    20581 attctatttc tttgtgttaa ttttactcta ccatttagtc aaacagaacg aagagataat
    20641 atgataaaac aatagaagaa agttgggaat ataaccgagg tggtaacttc atcttctacc
    20701 acaggataaa tgtcgggata tttcctcttt ttctgcttct tactactaat tccgattagc
    20761 caaataccat tccactgttt tacgcaagcc actttcaaaa gtttctttcg gtttccagtc
    20821 gagttccttt tcgatttttg aagtatcaat tgcatagcgg aaatcgtggc cagggcgatc
    20881 ttgcacataa gtaattaaat cagcatattg tcctacaaca agcgggttat ttggcaccat
    20941 ttcttgcaaa atagaacaga tagaacgaac cacttcgata ttggtttttt cattatgccc
    21001 gccaatattg taggtttctc cgatttgccc tttttgcaac accaaataga gggcacgaat
    21061 atgatcttcc acaaacagcc aatctctgac ctgcaagccg ttgccgtaaa caggtaggga
    21121 tttaccttct aaggcattta aaatcattaa cggaataagt ttttcgggat attggtatgc
    21181 cccataatta ttggaacagt tggtgatgac agtcggtaaa ccgtaggtgc gatgccaagc
    21241 ccgagccaga tgatcgctgg cagctttaga tgccgaatag gggctacttg gattataagg
    21301 ggttttctcg gtaaataatt cctcgctttt ggctaaatca ccatagacct cgtcggtcga
    21361 gatatgtaga aagcgaaacg ccgatttcct tggctcaggt aacgtgtccc aataggctct
    21421 cgctgcctct aataaagtat aagtgccgac aatattggtt tgaataaaat ctgctgcccc
    21481 agaaatagag cgatcaacat ggctttccgc tgctaagtgc attaccacat caggctgata
    21541 tttgccaaaa atctcagaaa tttgaccgct tgcacaaata tctgcttttt caaaatggta
    21601 gcgttcgtga tgtgcgacac tctccaatga ggctaaattt cccgcatagg tgagcttatc
    21661 cacattgata actgtgtgtg gagtatgttc aatcagatag cgaactaatg cagatccgat
    21721 aaaaccggct ccgccagtga tgaggatgat cataaaggtg aatatgaaat ttgattcacg
    21781 aaatttcgtt tgtatttaat atggctttga atattctttt cagcgtcttt tttatcccaa
    21841 atttgcaatt cccaaggata ataaaagtta cttgaattct taaaataaat atgaataccc
    21901 acatattcat ctttatctct caaataccaa ttttttagtc catatttttc ttgccaataa
    21961 tctaatgact ccattacttg ctgaatcact tcactagaaa caataatacg agctccaaaa
    22021 atatcgttga gaatgctatt tactggataa ccttcactac gctgtttaaa acgctcgatt
    22081 ttatctaaaa tcgattctga ggtttttact cggtaaaaat aagaaattcc ctctaaatct
    22141 gcacgatata aataatcatt aatagattcg tgtaaattaa gacgataagc taaaatatgt
    22201 ggcgtaggca ctttggcaaa agtatgctta agattcactt tttcaatctt acctgtttca
    22261 aagtagtctt tcgaaaaagc taagtgcaac ttgttgattt catcaatgag tttttctatt
    22321 ttctcaagc
//
LOCUS       DANLXO010000031        22135 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.031, whole genome shotgun sequence.
ACCESSION   DANLXO010000031 DANLXO010000000
VERSION     DANLXO010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22135
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.031"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(207..701)
                     /locus_tag="PXD69_001036"
     CDS             complement(207..701)
                     /locus_tag="PXD69_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6283247.1"
                     /translation="MSRKYKFHEKSGAYFVSFATVYWVGVFVREIYFQVIVDALDYCR
                     KHKGMILYAYCIMPTHIHLLFQAENQNPSDLIRDFKTFTAKILIQRIKDNLQENRREW
                     LLWMFSRAAERRCNVKQYQFWQHHNQPIEIYSQKFFDEKLNYIHQNPVVSGFVSEPWE
                     WKYN"
     gene            complement(1305..2144)
                     /locus_tag="PXD69_001037"
     CDS             complement(1305..2144)
                     /locus_tag="PXD69_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL6283248.1"
                     /translation="MGEFNCPDVNFPHTATGKHKRINYSATLSAYIHDLFTPFISYSQ
                     THRAPNIKEIFFSNLGDYGVNTALQPEQAKTTQFGINGFKERVFSEEDKLGFKVLFYN
                     THLKNYIYNVQHTAVGSAPSLFIFHKNYEKPVNIKGIELEFSYDIGSFYGNLAYARQN
                     TNQPVSFTDASSRVDAASHYGFKTQGFGASKISALPRDYGSLELGTRWFDQRLQIGGV
                     AKYYGKSKRIAIDEFNYTYYPGTHIVKETHRLEETVNKQPIIVDFYVSYEPIKSLILK
                     LEL"
     gene            complement(2811..3188)
                     /locus_tag="PXD69_001038"
     CDS             complement(2811..3188)
                     /locus_tag="PXD69_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL6283249.1"
                     /translation="MDKSQGVVSVNIRGGSGFGRANNAVGPNYMGMLAGKYQFNDSTW
                     IGALFGHSWRKISQNYKIGGGRKVTDSSIDLSKIDDLDKESSTTSPFNAAHLKQKPMS
                     RMAKLEYGDKYQTITLLPKSGSG"
     gene            complement(3637..3819)
                     /locus_tag="PXD69_001039"
                     /pseudo
     CDS             complement(3637..3819)
                     /locus_tag="PXD69_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(4174..8070)
                     /gene="purL"
                     /locus_tag="PXD69_001040"
                     /gene_synonym="purI"
     CDS             complement(4174..8070)
                     /gene="purL"
                     /locus_tag="PXD69_001040"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HDL6283250.1"
                     /translation="MTIQTFRGSPALSAFRIQQLLQKFQQNQLPVKSVYAEFLHFVAL
                     NRPLVADEENKIKELLHYGPTLEEDEPTGFCLIVTPRIGTISSWSSKATDIAHNCGLA
                     AVERIERGTAYYLEFSETPNESQLTTLKGLLHDRMMETVLDNESQAEQLFAQQEPKPF
                     TSVDILGGGRKALEEANINLGLALADDEIDYLVENFTQLGRNPNDIELYMFAQANSEH
                     CRHKIFNADWTIDGVKQEKSLFKMIKNTFEKTPDYVLSAYKDNAAVMEGSTVGRFFPD
                     QDGQYRYHQEDAHILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGRGAKPKAGLT
                     GFSVSNLVIPKFEQPWENPLSKPNRIASALDIMIDGPLGGAAFNNEFGRPALLGYFRT
                     YEEKVNSFAGEEIRGYHKPIMLAGGIGNIRAEHVQKGEIPVGAKLIVLGGPAMNIGLG
                     GGAASSMASGKSKEDLDFASVQRENPEMERRCQEVIDRCWQMGAENPILFIHDVGAGG
                     LSNAMPELVHDGECGGKFDLRNILCDEKGMSPLEIWCNESQERYVLAVSPEKLDIFTA
                     LCERERAPFAVIGEATKEKHLTLADPHFDNKPIDLPMNVLLGKTPKMQRDVLSKTVKN
                     PPLATADIDLKEAFHRVLRLPAVAEKTFLITIGDRSVTGMVAQDQMVGPWQIPVADCA
                     VTTASLDSYHGEAMSIGERSPVALLDFAASARLAVAESITNIAATNIGDIKRIKLSAN
                     WMSAAGHEGEDAGLYEAVKAVGEELCPELGITIPVGKDSMSMKTTWEENGEQKSVTAP
                     LSLVISAFARVEDVRKTVTPQLRTDKGDTRLLLIDLGEGNNRLGATALAQVYKQLGDK
                     PADVVNVARLKGFFNAMQTLVAQGKLLAYHDRSDGGLITTLAEMAFAGNCGISVEIDR
                     LVDDLAVLFNEELGAVIQVRTEELSEVQAVLNAENLANLTFDIGTAVESDSFEITRNG
                     TTVFSQKRSELRGIWAELTHQMQRLRDNPECADQEFAAKKDPNNKGLSAFLTYDVNED
                     IAAPYINKGVKPSVAILREQGVNSHYEMAAVFDRAGFNAIDVHMSDLISGRRNLNDFN
                     AMVACGGFSYGDVLGAGGGWAKSILFNPMLRDQFSKFFANPNTLALGVCNGCQMVSNL
                     AEIIPGTENWPRFVRNKSERFEARAAMVKINDTNSLWFNGMAGSHMPIAVSHGEGQVE
                     FKNPQQLANLQQQNLVIAQYVDSHLNPTEQYPANPNGSALGITAIGNTDGRVAIMMPH
                     PERVFRAVSNSWCPEDWTEGGAWMRLFRNARVALKY"
     gene            8332..8511
                     /locus_tag="PXD69_001041"
     CDS             8332..8511
                     /locus_tag="PXD69_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283251.1"
                     /translation="MFKEKGYDEFLAEKIRLGLEDMQSGNGLSLDESKARTKQLIERK
                     ARELANFEQENIIYG"
     gene            8504..8791
                     /locus_tag="PXD69_001042"
     CDS             8504..8791
                     /locus_tag="PXD69_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6283252.1"
                     /translation="MAKTLRISSRAQNDIEEILASVIEYTGFESSGIRLQEDIYQKFE
                     TIAYMPSAAGRLREDGTREAFTRRYRIVYTELENEVWIITIIHSSRLYPRI"
     gene            complement(8917..11019)
                     /locus_tag="PXD69_001043"
     CDS             complement(8917..11019)
                     /locus_tag="PXD69_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL6283253.1"
                     /translation="MKSFKLLPVSAAVLSVLAANAVAQTASTDAVVLDTVTVTDNQGL
                     KVQSNVVTTKKKDESTQTDLRGLLKDEPAISLGGGNGTSQYLYIRGMGQNSIDVKVDN
                     TYSDSQILYHQGRHMLDPALVKIVSVQKGAGSASAGIGQTNGAVIAKTVDALDLLKNS
                     DKNFGAKLGTGFSTNHAHNFNATLYGKGEIFDALVSGNLVRDRDYKGGKDYVNQFGTN
                     RVPYSALDKTSFLAKLGATLGDHRFVLSHSSERNEGQRLVREEFDVAPNGTKVSPYNR
                     LTVERQAPANRRITVQRTNLEWTGKNLGFAQEATANVYQLVQGRWSENETGNGYAGGV
                     DYATKTKIVTHGANVNFDSALHENVLLKYGVNYRHQEAKPHTKFNPLVKNQEKTDTGV
                     YVEAITAPVDKVTLTTGVRYDHFKFKAMDGKERSNGAFSPSVGLIYEPIEHLSLSASH
                     NYATRSPRLYDALTAHGNRKIVSIGSNTKAEKARNTEIGFNYNNGTFSFDGSYFWQDI
                     KDALGGGRDSHNPNNELIMNLGKIKNRGYELNAGYHNGGFTARIGVAHSKPRFYSPTI
                     WEVNRQTGKREEKPLLSTNPEYASAIGRTWTASLSYRFEQPNLEVGVHHRIVEKVKPE
                     DNFFVTGGTLQTNTGTGKDGYNVTDITLNWKPLKDDSVNVNFAVDNVANKKYNAHGQR
                     GQLSARGREFRAGVNYTF"
     gene            11302..12048
                     /locus_tag="PXD69_001044"
     CDS             11302..12048
                     /locus_tag="PXD69_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL6283254.1"
                     /translation="MQLRHKQIMEYIQQFDEANVQELAEHCGVSIETIRRDLNKLDKD
                     GLLHRTHGGAVSHKKRDIGRSFTTRQRLNSEAKRSIAENVLEYLQPESVIALDASSTS
                     WNVAQRIPNIPCTVVSSSMRIIYSLSHKPHIKTIATGGIYSEKYDAFYGPLSEQLLTR
                     LKIDLAILSCTGIADGAIWESNEINISLKRKLIANSKQVFLLADHSKFERKDLFRIED
                     LSCIDKLFINQPPPDFLKNYCLAHQIEIII"
     gene            12244..14007
                     /gene="fucI"
                     /locus_tag="PXD69_001045"
     CDS             12244..14007
                     /gene="fucI"
                     /locus_tag="PXD69_001045"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HDL6283255.1"
                     /translation="MTTLKSTPVKIGIRPTIDGRRLGVRESLEDQTMNMAKAVAQLIQ
                     SEVRHPNGDFVECVIADSTIGGVAEAAACAEKFKRENVGAVITVTPCWCYGSETIDMD
                     PHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDQSIPDDVREK
                     LLHFARAGLAVATLRGKSYLSIGSVSMGIAGSIVNQQFFQEYLGMRNEYVDMTEIKRR
                     LDRHIYDAEEFKLAMSWVKTYCKEGIDVNAPENQRSPEEREKLWEDVVKMTIIARDLM
                     VGNPRLAELGYSEEALGHNAIAAGFQGQRQWTDHLPNGDFMEATLNSTYDWNGVRAPY
                     IMATENDSLNGVNMLFGNLLTGQAQIFADVRTYWSEDSVERVTGWRPESGFIHLINSG
                     SAALDGTGQHTDRAGKPTIKPAWEVTEEDGKRCLENTCWCPAVHEYFRGGLSSQFLTK
                     GGMPFTMHRINLIKGIGPVLQIAEGWSIDLPENVHDILNKRANETWPTTWFVPRLTGK
                     GAFTDVYSVMANWGANHCVATFGHVGADLITLASMLRIPVCVHNVEDKDVFRPSAWNG
                     FGQDKEGQDYRACANFGPLYK"
     gene            14201..15634
                     /gene="fucK"
                     /locus_tag="PXD69_001046"
     CDS             14201..15634
                     /gene="fucK"
                     /locus_tag="PXD69_001046"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HDL6283256.1"
                     /translation="MPISLIFDCGATNLRTIAINQAGEIVAAHHLPNNTQPDVESPEF
                     HIWDIEEIWSKLMTCAKQTLSQLSEQQRQEIVGISVTTFGVDGALFDKNGKQLYPIIS
                     WKCPRTLPIMENLANYLDVEALYQRNGVGHYSFNTLFKLLWLKENKPEIYQQAESFLF
                     ISSILTYLLTGVQTTDRTMAGTSMMTNIENDSWDKTVLDLLGLTENHFPPMKSAGEVV
                     GTLKGEISQELGLSGQIPVISCGHDTQFAIFGSGAGYNQPVLSSGTWEILMVRTPKAK
                     PQWQFVQNGLTIEFDSQSGYFNPGVQWVASGVMEWFGKRFFSDIANTEHYYRTMIEEA
                     AEVPAGSNGVKLVGNFDGTTAKTGSIIGLSMHITRGEIYRAGLEYMAHRLKEGLDVLQ
                     EVGHFNAESLICVGGGSKNALWNQIRADVLNRPIDVVDFPESTVLGAAMFTFTGAGVF
                     ENPNAAQQAMKPNVKRVEPSSNSQFYK"
     gene            15709..16140
                     /gene="fucU"
                     /locus_tag="PXD69_001047"
     CDS             15709..16140
                     /gene="fucU"
                     /locus_tag="PXD69_001047"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HDL6283257.1"
                     /translation="MLKGIHPAISPDLLKVLAEMGHGDELVLSDAHFPAHSIHQNVIR
                     ADGLSVATLLEGISALFEFDQYVEAPLAMMQAVKGDTLDPSVEERYLNAIKKVNGTAP
                     KIERVERFAFYDRAKNAYAVVITGELAKYGNIIIKKGVTPV"
     gene            16200..16853
                     /locus_tag="PXD69_001048"
     CDS             16200..16853
                     /locus_tag="PXD69_001048"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HDL6283258.1"
                     /translation="MDRKILARQIIDTCLEMTRIGLNQGTAGNVSVRYKDGMLITPTG
                     TPYEQMTEDSIVFVDGNGKHEEGKLPSSEWQFHLAVYEARPELNAVVHNHAKNCAAVS
                     ILGEPIPAIHYMIACTGTNHIPCVPYAPFGTHQLADYVREGIKHSKAILLAHHGLITA
                     DKTLEKALGIAHEVEVIAEWYLKLLATGKPIPTLNKEQMDIVLGKFKSYGSWVESEQ"
     gene            16915..18444
                     /locus_tag="PXD69_001049"
     CDS             16915..18444
                     /locus_tag="PXD69_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6283259.1"
                     /translation="MQNEVILTMKNISKSFAGVNALKGVELTLRKGEVHALMGENGAG
                     KSTLMKCLLGVYQADEGEIIYKGQPVRFESVLEAQKAGISMIFQELNLIPHLTVAENI
                     FFAREPLKHGLVDKDKMVEESAKLLNFFEIDVDPNDEVRMLSVAKQQMVEIAKALSFD
                     VEVLIMDEPTSALTEKEIDKLFELVDRLRAKGVSIVYISHRMEELKRICNHITIFRDG
                     TYVSNHKFNEITMDEIITKMVGRSLDNHFPPKTAVVTNDIILSIMNAERKGVFEPLNF
                     DLRKGEILGITGLVGAKRTELARAIFGADPLDSGEIFVHENKVSIKDPSDAIKAGIAY
                     LSEDRKLNGVAVRMSIRENITMASMDKVANQIGVISYDEEEKASKTFIDKMEIKTPTI
                     EQKVQNLSGGNQQKVVIGKWLFREAKVMIFDEPTRGIDVGAKYAIYQLLDELAANGVG
                     VIVISSELPEVLGVSDRIIVMREGRMTGMLETKKTNQEEIMHYATGVKNMFAREYGVE
                     K"
     gene            18441..19439
                     /locus_tag="PXD69_001050"
     CDS             18441..19439
                     /locus_tag="PXD69_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6283260.1"
                     /translation="MNEKQKEMLRKMAALAGLVLLIIFFSVTNEYFFTSNNIMTVGLQ
                     TSTIALIGIGATCVILTGGIDLSTGSVVALSGVAAAMIVNAGVPVPLGMILGILVGGI
                     CGLINGILVTRMKLPPFIATLGMMMVARGLALYVTNAAPVSGMPESFANLGNGALFKI
                     VEEGANGLPKVVFAGIPYPVIIMIFITVLFTFALSKLKVGRYLYAIGSNEEAARLSGI
                     KTNIVKIYAYVASGLLSGLTGVILASRLVTAQPNGGVSYELDAIASAVVGGTSLMGGV
                     GTIPGTLIGSFIIGVLRNGLNMNGVSSFVQMIVIGLVIIVAVSLDQLRQSKKAGKK"
     gene            19463..20410
                     /locus_tag="PXD69_001051"
     CDS             19463..20410
                     /locus_tag="PXD69_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6283261.1"
                     /translation="MKKSALFTATLFGLSTLFAGSAMAKSDEIAVIVKSANSTFWQNV
                     RKGAETAGKDIGGQYKVTFQGPEAETAIDAQVNMVDNAVNRGVAGIVLAASDPVALVP
                     AVKKAYESGIPVVLIDSGINSDGKYYQSFLATDNRAAGKLAAEKLLAKVKGGKVAVMS
                     FTQGAASAIERTGGFIDEIKAKADYKLVGPYYSDSDMTKALNQTEDVLGSNPDLAAIF
                     GANEPTAVGMARAVKQKGFAGKIVAVGFDGNSDLQNFVRDGTLDGIVVQSSYQMGYKG
                     VDTIGKLIKGEKVEKVIDTGVVYVTKENIDSEEAKGVLY"
     gene            20466..20717
                     /locus_tag="PXD69_001052"
     CDS             20466..20717
                     /locus_tag="PXD69_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL6283262.1"
                     /translation="MSNTLTDKALVVIAALGGRENIVDVYACITRLRVEVKNTDIVEW
                     DKIKSVGALGVVTSGSVIQSIFGSDAEAYRDEIKRILNI"
     gene            20846..21997
                     /gene="fucO"
                     /locus_tag="PXD69_001053"
     CDS             20846..21997
                     /gene="fucO"
                     /locus_tag="PXD69_001053"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HDL6283263.1"
                     /translation="MANRLILNETSYHGKGAIQNIVHEVTSRSFKKALVVTDKDLIKF
                     NVAQKVTALLDAAGLPYEIFDEVKANPAVDVIKAGVAKFKASSADYLIAIGGGSPIDS
                     AKAIGIIINNPEFSDVLSLEGVAPTHQKCVPIIAIPTTAGTAAEVTINYVITDEAKKR
                     KFVCVDVHDVPAVALVDPDMMESMPKSLAAATGMDALTHAIEGYITKAAWELTDALHL
                     KAIELIGRSLRGAVEKNPKDVEAMALGQYVAGMGFSNVGLGAVHSMAHPLSAYYDTPH
                     GIANAVLLPYVMEFNKNYTGEKYREIARAMGVKGVDEMSQEEYRNAAIAAVQQLSQDV
                     GIPPKLHQIGVKEADLAALSVDAFNDVCTGGNPRDCTAEELLEVYRIAY"
BASE COUNT         6473 a         4643 c         4650 g         6369 t
ORIGIN      
        1 caatgtaaat tatttgatct gatacataaa agcgggaatt aattactggg tagaaatagg
       61 ttatatcgct attttcattt gggttatcta ctcatagaat acctttaact aaaacataat
      121 aagcagaatt tacgcaaaat tctccgacag acaagtaaaa attcacaatt tttcgacaga
      181 gatcgcaaaa atacaagcag tttatttcaa ttatatttcc attcccaagg ctcagacaca
      241 aaaccactta ccactggatt ttgatgaata taatttaact tttcatcaaa gaatttctgc
      301 gaatagattt caataggttg gttatgatgt tgccagaatt gatattgttt tacattacaa
      361 cgtcgttcag ccgcccgaga aaacatccac agcaaccatt cccgacggtt ttcttgcaaa
      421 ttatctttaa ttctctgaat aagtatttta gcggtgaatg ttttgaaatc tcgtattaaa
      481 tcagaaggat tttgattttc tgcttgaaat aataaatgga tatgagttgg cataatacaa
      541 taggcataca aaatcattcc cttatgtttt ctgcagtaat ctaaggcatc aacaattacc
      601 tgaaaataaa tctctctcac aaacacacca acccaataaa cagttgcaaa actgacaaaa
      661 taagcaccgc tcttttcgtg gaatttatat tttcggctca tagcctttct caacttaaaa
      721 aggaataaga aaaataccct attcaaaatt aaattccaca agccaatata actttttcga
      781 tctagatcgc aaaaatcatt aaaacttgca aagtgttgat aaaatttaac cgcttgtgat
      841 aagccaaaga aatactgaaa tgatagcaat ggatggataa ataaaatgat gacgcaagcg
      901 tccacgcttg tgccaaaaac aaaagcccaa ataaaccaaa ttttacttgg ctgatttagg
      961 cttttatctt atgactgaaa tactttcaga acaggaatta actggcacaa gcgtggacgc
     1021 ttgcaccatc tgggttaaat ccttatatta taaggtttta acctactgtg cagactcaat
     1081 tttagtcact atgccaaata attagttaaa ggaaatttaa gctagcttat ctaggacaac
     1141 cccatttaga atttataact tgtgctaaac actatagttc tccctcttgc ataattattg
     1201 agcgtataaa taggttcatc actgatatca gaattgtaaa ccctctgact tgctgcatca
     1261 ttattagcat caagaggatc aatgtacttt ttgtcaaaga cattttatag ttctaacttt
     1321 aatataagcg acttgattgg ttcgtagctc acgtaaaaat caacaataat aggttgttta
     1381 tttacggttt cttcaagccg atgagtttct ttcacaatat gtgttccagg ataataagta
     1441 tagttaaact catctatcgc aatacgttta ctttttccgt aatattttgc cactccgcca
     1501 atttgtagtc tttgatcaaa ccatcttgtc cctaactcca atgagccata gtctcttggt
     1561 aacgctgaaa ttttgctggc accaaaacct tgagttttaa aaccataatg agaagcggca
     1621 tctacccttg aacttgcatc tgtaaaggat acgggttgat tcgtattttg acgagcataa
     1681 gctaagttgc catagaaaga gcctatatca taactaaatt ctaattctat ccctttgata
     1741 tttactggtt tttcatagtt tttgtggaaa atgaataaac taggagcact accaacagcg
     1801 gtatgttgta cattataaat atagtttttt aagtgagtgt tataaaatag cactttaaat
     1861 cctaatttat cttcttcact aaatacccgt tctttgaatc cattaatacc aaactgtgtt
     1921 gttttcgctt gctctggttg tagtgcggta tttacaccat agtcacctaa attagagaag
     1981 aatatttctt taatattagg ggctcgatgt gtttgagaat aactaataaa gggcgtgaat
     2041 aaatcgtgaa tataagcaga caaggttgct gaataattaa ttcgtttatg ttttcctgtt
     2101 gctgtatgag gaaaattgac atcaggacag ttaaactctc ccaattcagg atcattagga
     2161 aaatcctcat ctggaatata tgtacaatgt ttttttgcaa gttgtctaat tgagattgta
     2221 atgaccttaa atgctcaaac tgcctatttc tacttgcctg tctaatatct gactccaatt
     2281 ctctaatcgc aaaaggaaaa tatttaaaac gctgaccaat aaaccgagcg gtattaatat
     2341 ttgcgtttat atccaatccc catataccat agttaaagtg attgtcgaga taaaaagtat
     2401 cgaacttctg ttcgccatca ggctggaaag ttgaagtata aagcgattta cgaacggctg
     2461 tcattcctac agaatcgttg ttttcgctgg tttcgccatt ctctaagtta tagtttaatt
     2521 ccgcaggatg tctattttta ctatagcggt tctttaaacg attaaaacct aatattgctt
     2581 cccattctcc atctttaaac ggagacactt taaaggtgtt actcaaattt aaggttgtcg
     2641 ctttgttgtt aattgccaaa ccttgaatta aatatttatt attaattcag ctccctttgt
     2701 tgtagttttg tttgccttga ttttccgcat aggccacttg aacatctaac caaggtgact
     2761 cgggcaagtg aaaacgataa tttaactggt tgttttggtt ttttaaatgt ctacccgcta
     2821 cctgactttg gtaatagtgt gatggtttgg tatttatcgc catattccaa tttagccata
     2881 cgactcattg gtttttgttt taaatgagct gcattgaacg gtgaggtggt agaactttct
     2941 ttatctagat catcaatttt actaaggtca atcgagctat ccgtaacttt tcgtccgcct
     3001 cctattttat aattttgaga gattttgcgc caactatgcc caaataatgc tcctatccaa
     3061 gtagagtcat tgaattggta tttgccagcg agcattccca tataatttgg gcctactgca
     3121 ttattagctc gcccaaatcc agaacctcct cgaatattaa cagaaaccac accttgagat
     3181 ttatccattt gtgtaaatgc gccaggcata gaacgaacaa tagtctctaa gctttggttt
     3241 gattccaaga ttttatctcg ggtgcttatt gcccctgttt taatgaaaac ttcatctgtt
     3301 tttttattgc ttgggcttta acctcaaccg tatctaacat ataaccttcc tctgcgaata
     3361 ccctaggtaa ggggcagata agtgttgtat aagtcaggtg aaatacatat tttttgatct
     3421 tcatttctat tgtctttcct ataaaaaatg taattaaatt taaatcgcaa cgctaaagac
     3481 actgaagaaa gaagtgtgcc tttattgcac gagtctagta tagcacaaga cgaaaatatt
     3541 aatcatgttc aatattataa taaaaggata cgttagacga ttagcataaa tagaaatatg
     3601 cacttaaata gaggattata aaaataaggg gctatcctag aaactcaatt taaccaattg
     3661 ttttaaaaag aaaacttgat attttaagtt actgtgatta aaacgccatc tgcattcttt
     3721 caaatagaat tcatgtactt taggaacgcc gttaaattta cgcaaatagc attttgcctg
     3781 actctccaaa ttctcaattc cgttaatgtg attttgattg ctaactaaaa accactttct
     3841 attaaggtag aattgaccgt tcaaataaat cacgttcatt ttctgtataa gacgtaatgg
     3901 ggcatttaaa agggtgaaca gggtccaata agatttttca ataagtttcc ctatttacgt
     3961 aagcataaat tgtggggcaa cccacttttg tggcaagagg ctactgcgta gacaccgtag
     4021 atgtcaatgc agaaatgata agaaagtact tgaaatatca ggaaaagcac gaaggataaa
     4081 caacttcgtt tatcagatat ataaaaattc gggttctatg aattcgaatt ttaatcgccc
     4141 cctatggggg cagatcacta cgaaggtaga tttttaatac ttcaacgcca ctctcgcatt
     4201 tctaaacaac cgcatccacg ctccaccttc cgtccaatct tctgggcacc aagagttact
     4261 gaccgcacgg aacacacgtt cagggtgtgg catcataata gcgactcgtc cgtctgtatt
     4321 accgatagcg gtgataccca acgccgatcc gttcgggttg gctgggtatt gttcggttgg
     4381 gttgaggtgg ctatccacat attgtgcgat cacgagattt tgctgttgca agttcgctaa
     4441 ttgctgtgga tttttgaact caacttgtcc ttcaccgtgt gaaaccgcaa tcggcatatg
     4501 gctgcctgcc attccgttga accaaagtga gttggtgtcg ttgattttca ccattgcagc
     4561 acgggcttca aaacgttcgg atttattacg cacgaagcgt ggccagtttt ctgtgcctgg
     4621 aataatttcc gctagattgg agaccatttg gcaaccatta cataccccta atgccagcgt
     4681 gttcgggttg gcgaagaatt tgctgaattg gtcacgcagc attgggttga acagaatcga
     4741 tttcgcccag ccgccgcctg cacctaagac atcgccgtaa gagaagcctc cgcacgccac
     4801 cattgcgttg aagtcgttga ggttgcgtct gcctgaaatc aagtctgaca tatgcacgtc
     4861 aatggcgttg aaaccggcac ggtcaaagac ggctgccatt tcgtagtggc tgtttacacc
     4921 ttgctcacgc aaaatcgcca cactcggttt tacgcctttg ttgatgtatg gggcggcgat
     4981 gtcttcgttc acatcgtaag ttaaaaatgc ggataagcct ttgttattcg ggtctttttt
     5041 cgctgcaaat tcttggtctg cacattcagg gttgtctcgc aaacgctgca tttgatgagt
     5101 gagttccgcc caaatgccac gcagttcgga acgtttttgg ctaaatactg ttgtgccgtt
     5161 gcgggtaatt tcaaagctgt cgctttcaac cgctgtacca atatcaaagg tgagatttgc
     5221 aagattttcg gcatttaaca ccgcttgcac ctcgctcaat tcttcggtgc gaacttggat
     5281 tactgccccc agttcttcgt tgaataacac ggctaaatcg tccaccaagc ggtcgatttc
     5341 caccgaaatt ccgcaattcc ctgcaaacgc catttccgcc agtgtggtga ttaaaccacc
     5401 gtccgagcgg tcgtggtagg caagcaattt tccttgtgcg acaagggttt gcattgcgtt
     5461 gaagaagcct tttaagcgag ccacattcac cacatcggca ggtttgtcgc caagttgttt
     5521 gtaaacttga gcaagtgcgg ttgcacccaa gcggttgttg ccttcgccca ggtcgatcag
     5581 caacaagcgg gtatcgcctt tgtcggtgcg aagttgtggg gtaacggttt tacgcacatc
     5641 ttccacacga gcgaaagcgg aaatcacgag cgaaagcgga gcagtaacag atttctgttc
     5701 gccgttttcc tcccaagtgg ttttcatcga cattgagtct ttgcctaccg gaatggttat
     5761 gcctaattca gggcaaagct cttcgcccac cgcttttact gcctcgtaaa gccctgcgtc
     5821 ttcgccctcg tgccctgccg ccgacatcca attcgccgag agtttaatgc gtttgatgtc
     5881 gccaatgtta gtggcggcaa tattggtgat gctttctgcc acggcgaggc gagctgaggc
     5941 agcaaagtca agcaaagcaa caggtgatcg ctcgccaatt gacattgctt caccgtgata
     6001 gctgtctaat gaagcggtgg ttacggcaca atctgccaca ggaatttgcc acgggccgac
     6061 catctgatct tgtgccacca ttcccgttac tgagcgatcg ccgatggtaa tcaggaaggt
     6121 tttttcagcc accgcaggca agcgtagcac acggtggaac gcctctttca agtcgatgtc
     6181 agcggttgca agcggtggat ttttcacagt ttttgacaaa acatctcgct gcatttttgg
     6241 cgttttgccg agcaacacat tcatcggcaa atcaatcggt ttattgtcaa aatgagggtc
     6301 agcaagggtt aaatgcttct ctttcgttgc ctcgccaatc accgcaaatg gggctctttc
     6361 cctttcgcac aatgctgtga aaatgtcgag tttttcaggg gaaacggcaa gcacataacg
     6421 ctcttgcgat tcgttacacc aaatttcaag tggcgacatt cctttttcat cgcacaagat
     6481 gttacgcaaa tcaaacttac cgccacattc gccgtcgtga accaattcag gcatcgcatt
     6541 tgataaaccg ccagccccca cgtcgtgaat aaataaaatt gggttctccg cccccatctg
     6601 ccagcaacgg tcgatcacct cttggcaacg gcgttccatt tcagggtttt cccgctgaac
     6661 cgaggcaaaa tccaaatctt ctttcgattt ccccgatgcc attgacgatg ccgccccacc
     6721 gcctaagccg atgttcattg ccgggccacc aagcacgatc aacttcgctc ccaccgggat
     6781 ttcgcctttt tgaacgtgtt cggcacgaat gttgccgata ccgcctgcta acataatcgg
     6841 cttgtgatag ccacgaattt cttcgcctgc gaagctgttc actttttctt cgtaagtacg
     6901 gaagtagccc aataacgcag gacgaccaaa ttcattgtta aatgccgctc cgcctagtgg
     6961 gccatcaatc ataatatcca gtgcggaggc aatgcgattc ggcttggaaa gcgggttttc
     7021 ccacggctgt tcaaattttg ggatcactaa gttagagacc gaaaaacccg tcaagcccgc
     7081 tttcggtttc gccccacgcc ctgtcgcccc ttcatcacga atttcaccgc ccgaaccggt
     7141 cgccgctccc gggaatggcg agatggcggt tgggtggttg tgagtttcta ctttcattaa
     7201 aatatgagca tcttcttgat gatagcgata ttgtccatct tggtcgggga agaaacgccc
     7261 aaccgttgag ccctccatca ccgccgcatt gtctttgtag gcggaaagca catagtccgg
     7321 ggttttctca aaggtgtttt taatcatctt aaacagggat ttttcctgtt ttaccccatc
     7381 aatcgtccaa tccgcattaa aaattttgtg gcggcaatgc tccgagttgg cttgggcgaa
     7441 catatagagt tcaatatcat tggggttacg cccaagttgg gtaaagtttt ccaccaagta
     7501 atcaatttca tcgtccgcca acgctaaacc taagttgata ttcgcttctt ccagtgcctt
     7561 gcgaccaccg cctaaaatat ccaccgaagt aaacggcttc ggctcttgct gagcgaaaag
     7621 ctgttcggct tggctttcgt tatccagcac cgtttccatc atacggtcgt gtaataagcc
     7681 tttcaacgtc gtaagttgac tttcgttcgg cgtttcagaa aattctaaat aatatgccgt
     7741 gccacgctca attcgctcta ctgctgccaa accgcagtta tgggcgatgt cggttgcctt
     7801 agacgaccac gaggaaatcg tgccgatacg aggggtaaca atcaggcaaa accctgtcgg
     7861 ctcgtcttct tccagcgttg gaccgtagtg caataactct ttgattttgt tttcttcatc
     7921 ggctacaagc ggtcgattta atgccacaaa atgcaaaaac tccgcataaa ctgattttac
     7981 aggtaattga ttttgttgga atttttgcag aagttgttga atgcgaaaag cagataaggc
     8041 aggcgagcca cggaaggttt ggattgtcat tctttggatt ttcctattta agatgaaaaa
     8101 ctaaaccgat tataaacgat tgcgcaaacg attgctatat ttgtcagacg tttgctgtta
     8161 gatacattta ttcattagta tcaaataaat ttgttcaata ctaatgaata cctttcaaag
     8221 aaggtcccct ctatcaatct gttttaaaag ataatttaaa aataagttaa tttgacaact
     8281 caaaattaaa agcagacaat gcttttaatt atatcttaat aggagcagat tatgtttaaa
     8341 gagaaaggct atgatgaatt cctagcagaa aaaattcgcc ttggcttaga agatatgcaa
     8401 tcaggtaatg gtctttcact cgatgaatca aaagcacgaa ccaaacaact gattgaacgt
     8461 aaagcaagag aactcgcaaa ctttgaacaa gagaatatca tttatggcta aaacattacg
     8521 aattagcagt agagctcaaa atgatattga agaaatttta gcgagcgtaa ttgaatatac
     8581 tggttttgaa agtagtggaa ttcgcttaca agaagatatt taccaaaaat ttgagactat
     8641 cgcttatatg ccctctgcgg ctggacgttt aagagaagat ggcacaagag aagcattcac
     8701 taggcgttat cgtattgttt ataccgaatt agaaaatgaa gtgtggatta ttaccattat
     8761 tcatagtagc agactttatc cacgcattta aataacaaac gactaaaata gtcggttttt
     8821 tatttgcaaa aaattaataa aatatcaccg cttgtaagct ccataaaaaa aagcccgatt
     8881 gtaacatcgg gcgttttagt ctgaatttaa gtcagattag aatgtgtagt tcacacctgc
     8941 acggaattca cgtccacgag ctgataattg accacgctga ccgtgtgcgt tgtatttttt
     9001 attcgccacg ttatccactg cgaagtttac attcacgcta tcatctttaa gtggtttcca
     9061 gtttaaggtg atatcagtta cattgtagcc gtctttgcct gtaccggtat ttgtttgtaa
     9121 tgttccgccc gtaacgaaga aattatcttc aggtttcact ttctcaacaa tacggtggtg
     9181 tacgccaacc tctaaatttg gttgttcaaa gcgatagctt aaagaagctg tccaagtacg
     9241 accgatagct gaggcgtatt ctgggttagt acttaataat ggtttttctt cccgcttacc
     9301 agtttgtctg tttacttccc aaatagttgg tgagtagaaa cgcggtttgc tgtgtgcaac
     9361 accaatacga gcagtaaaac caccattatg gtaacctgca tttaactcat aaccacggtt
     9421 tttaatttta cctaggttca taattaactc attattagga ttatggctat cacgaccacc
     9481 acctaatgca tcttttatat cttgccagaa atagctacca tcaaaactga atgtaccatt
     9541 gttatagttg aaaccgattt cagtattacg agctttctcc gctttagtat tgctaccaat
     9601 actaacgatt tttctatttc cgtgagccgt tagtgcatcg tataaacgag ggctacgagt
     9661 tgcatagttg tggcttgcac ttaagcttaa atgttcaatt ggctcataga taagcccaac
     9721 gcttgggctg aatgcaccat tactacgctc tttaccatcc attgctttga atttgaagtg
     9781 gtcgtaacgt acaccggtag ttaaagttac tttatctact ggagcagtaa ttgcttcaac
     9841 atacacgccg gtatcggttt tctcttggtt tttcacaaga gggttaaatt tagtgtgtgg
     9901 tttagcttct tggtggcgat agttcacacc gtattttaat aatacatttt cgtgaagggc
     9961 agaatcaaag tttacgtttg caccgtgggt tactatttta gttttggttg cataatctac
    10021 accaccagca taaccattac ctgtttcatt ctcagaccaa cgaccttgta ctaactgata
    10081 cacgttagct gttgcttctt gagcaaaacc taagttttta ccagtccatt ctaagttagt
    10141 tctttgaacc gtaattctac ggttagctgg agcttggcgt tctacagtta agcggttgta
    10201 cggagaaacc tttgtgccgt taggtgctac atcaaattct tcacgcacta aacgctgacc
    10261 ttcatttcgc tcacttgaat ggcttaatac aaaacggtga tctcccaatg ttgcacctaa
    10321 tttagctaaa aagctggttt tatctagtgc actatacgga acacggtttg tgccgaattg
    10381 gtttacgtaa tctttaccgc ctttatagtc gcgatctctc acaagattac ctgagactaa
    10441 agcatcaaag atttcgcctt taccatataa ggttgcattg aaattgtgag cgtggtttgt
    10501 gctgaagcca gtacctaatt ttgcaccgaa gtttttatcg ctgtttttta ataaatctaa
    10561 tgcatcaacg gttttagcaa ttactgcacc attagtttga ccaataccgg ctgaagcact
    10621 gcctgcacct ttttgtacag aaacaatttt caccaatgcc ggatctaaca tatgacgacc
    10681 ttggtgatac aaaatttggc tatctgagta agtgttatct acttttacat caattgagtt
    10741 ttgacccata ccacgaatat agagatattg tgatgtaccg ttaccaccac ctaagctaat
    10801 tgccggctca tcttttaata aaccacgcaa atcggtttgg gtgctttcat cttttttctt
    10861 agttgttacc acattgcttt gtacttttaa accttgatta tctgttacgg taacagtatc
    10921 taatactact gcatctgttg aagcagtttg agccactgca ttagcagcaa gtacgctcaa
    10981 taccgcagca gaaacaggga gcaatttgaa gcttttcatt ttatttatat tccttaggta
    11041 aattatttaa gaggattatc tgtttgatat taaaaataat tctcaacacc aaacgttcgc
    11101 aaattttaca gagataaaaa tgattgtcaa ttagtctgaa atgaaatttc acaaaatata
    11161 ttacaaattt tacaaaaagt tccctaaatt taaccgcttg caacacaaaa tgtgatcgcc
    11221 ttctaaaaat caaatttgct tgctcgacag taacgctaca agcggttaaa tttggagaaa
    11281 aatttacaaa aaggatagat tatgcagctg cgacacaaac agataatgga atatatacaa
    11341 cagtttgatg aagctaacgt tcaagaattg gcggaacatt gtggggtttc gattgaaact
    11401 atccgccgag atttaaataa gctagataaa gatggattat tacatcgcac tcacggtgga
    11461 gctgtgagcc ataaaaagcg agatattggt cgctcattta ccacccgaca acggctgaac
    11521 agtgaggcga aacgcagtat cgcagaaaat gtgttggaat atttacaacc agaatcggtg
    11581 attgctttag atgccagctc aacctcttgg aatgtggcac agcgtattcc aaatattcct
    11641 tgcaccgttg tcagcagttc aatgcggatt atctacagcc tttcacacaa accgcacatt
    11701 aaaacgattg ccaccggtgg tatttattcc gaaaaatacg atgccttcta tggtccatta
    11761 tccgagcagt tactgacccg tttaaaaatt gatcttgcca ttctttcttg tacaggcatt
    11821 gccgatgggg cgatttggga atcaaatgaa attaatattt cccttaaacg taaattaatt
    11881 gcgaacagta aacaggtttt tttattagcc gatcacagta aatttgagcg taaagacttg
    11941 tttcgtatcg aagatttatc ttgcattgat aaattattta tcaaccaacc cccaccggac
    12001 tttctcaaaa attattgctt agcacatcaa attgaaatca ttatttagtg atttctgccc
    12061 gattttattc agaaataaaa caaatcgggc attctttttt cactcatttt taccaaaatc
    12121 ccccattttt tgtgatcgca ctcacaaaat ttaaactaaa ttcgcatttt tcttcataac
    12181 tcatattgcg tatgcataat aaattcaatc gcaaattttt ttaaccaatc gggagaacta
    12241 tttatgacaa cgttgaaatc tacccctgta aaaattggta tccgcccaac cattgacggt
    12301 cgccgtttag gagtgcgtga atcacttgaa gatcaaacaa tgaatatggc aaaagccgtt
    12361 gcacaattaa ttcaatctga agtccgccac ccaaatggtg atttcgttga atgtgtgatt
    12421 gctgattcca ccatcggtgg tgttgccgaa gctgcggctt gtgcagaaaa attcaaacgt
    12481 gaaaatgtcg gagcggtgat taccgtaacc ccttgctggt gctacggttc tgaaaccatt
    12541 gatatggacc cacatatgcc gaaagccatt tggggcttta acggaacaga acgcccaggt
    12601 gcagtttatt tagctgctgc tttagcaggt catagccaat taggtttacc ggcattctcc
    12661 atttatggca cagaagtaca agaagctgac gatcaatcta ttccagacga tgtgcgtgaa
    12721 aaattactcc actttgcccg tgccggctta gcagtggcaa ccttacgagg aaaatcatat
    12781 ttatctatcg gctctgtttc aatgggtatt gccggttcta tcgtaaacca acaattcttc
    12841 caagaatatt tgggtatgcg taacgaatat gtggatatga ccgaaattaa acgccgttta
    12901 gatcgccata tttacgatgc cgaagaattt aaattagcaa tgagctgggt gaaaacctat
    12961 tgcaaagaag gtattgatgt caacgcaccg gaaaatcaac gcagcccgga agagcgtgaa
    13021 aaactctggg aagacgtggt gaaaatgacc attattgccc gtgatttaat ggtgggtaat
    13081 cctcgcttag cagagctagg ctatagtgaa gaagccttag ggcataatgc gattgctgcc
    13141 ggtttccaag ggcaacgcca atggacagac catttgccaa acggcgattt tatggaagct
    13201 accttgaatt cgacctatga ctggaacggc gttcgcgcac catacattat ggcaactgaa
    13261 aacgacagct taaatggcgt gaatatgttg ttcggtaact tattaaccgg tcaggcacaa
    13321 atctttgccg atgtgcggac atactggagc gaagactcgg tagaacgtgt caccggctgg
    13381 cgtccggaaa gcggttttat ccacttaatc aactccggct ctgcggcgtt agacggaaca
    13441 ggtcagcata ccgatagagc aggcaaacca actattaaac cggcttggga agtgactgaa
    13501 gaagacggta aacgttgttt agaaaacacc tgttggtgtc cggcagttca cgaatatttc
    13561 cgtggtggtt tatcttccca attcttaacc aaaggtggaa tgccgtttac gatgcaccgt
    13621 atcaacctga tcaaaggtat cgggccggtt ttacaaattg ccgaaggttg gtctatcgac
    13681 ttgccggaaa atgtacacga cattttaaac aaacgcgcca atgaaacctg gccgaccact
    13741 tggttcgtac ctcgcttaac cggaaaaggc gcatttaccg atgtgtatag cgtaatggcg
    13801 aactggggtg caaaccactg tgtggcaacc ttcggacacg ttggggcaga cttaattacc
    13861 ctcgcctcaa tgctccgcat tccggtttgt gtgcacaatg tggaagataa agacgtattc
    13921 cgcccaagtg cgtggaacgg tttcggtcaa gacaaagaag gtcaagacta ccgtgcttgt
    13981 gctaacttcg gaccattata taaataatac acaatcaccc tctccccttg tgggagaggg
    14041 acagccaagc aattcgttca gaattgaatg gcagggagag ggctacaagc ggtcgctttt
    14101 ctctcaaaat ttacaaatcc ctctctctga ttaaattgct aaacgcaatt taatctatct
    14161 ctctaaaagg gagatattag gataagtaaa ggagataaca atgccaattt ctcttatttt
    14221 cgactgtggt gccaccaacc tccgtacgat tgcgattaat caagcgggtg aaattgtggc
    14281 agcccatcat ctaccgaata acacacaacc agatgtggaa agcccagaat ttcatatttg
    14341 ggatattgaa gagatctggt cgaaattaat gacctgtgcc aaacagacgc tttctcaact
    14401 ttcagaacaa caacggcaag agattgttgg gatttcagta accacctttg gcgtggacgg
    14461 tgcattattt gacaaaaacg gcaagcagct ttatccgatc atttcttgga aatgcccgag
    14521 aaccctaccg attatggaaa accttgccaa ttatcttgat gttgaggcgt tatatcaacg
    14581 taatggcgtt ggacattata gtttcaacac cttattcaaa ttattgtggt taaaagagaa
    14641 caaaccagaa atttatcaac aagctgagag tttcttattc atctcatcta ttttgactta
    14701 ccttcttaca ggcgtgcaaa caaccgaccg cacaatggcg ggaacgtcaa tgatgacaaa
    14761 catcgaaaac gattcgtggg ataaaacagt tttagattta ttaggcttaa ccgaaaacca
    14821 ttttcctcca atgaaaagtg caggagaagt tgtgggaaca ttaaaaggag aaatttccca
    14881 agagttaggt ttaagcggtc aaattccagt aatttcttgc ggacacgata ctcaatttgc
    14941 catttttggc tcaggagctg gctataacca acctgtgtta agttcaggca cttgggaaat
    15001 tttaatggtt cgtaccccaa aagcaaaacc acaatggcaa ttcgttcaaa acggcttaac
    15061 cattgagttt gatagccaat ctggttattt caacccaggt gtgcagtggg tagcttcagg
    15121 tgtgatggag tggtttggca aacgtttctt ctctgatata gccaatactg aacattacta
    15181 ccgcacaatg attgaagaag cggcagaagt gcctgctggc tcaaacggtg tgaaattagt
    15241 cggcaatttt gatggcacaa cagctaaaac aggttcaatt atcggcttat ctatgcacat
    15301 cactcgtggc gaaatttacc gtgcaggctt ggaatatatg gctcatcgtc taaaagaagg
    15361 gttagatgta ttacaagaag tcggtcattt taatgctgag agtttgattt gtgtgggagg
    15421 tggttctaaa aacgctttat ggaatcaaat tcgagccgat gtcttaaata gaccgattga
    15481 tgtagtggat ttccctgaaa gtaccgtatt aggcgcggca atgtttactt ttacaggtgc
    15541 tggtgtattt gaaaatccaa atgcggctca acaggcaatg aagccaaatg tgaaacgggt
    15601 tgagccatcg tcaaatagtc aattttataa ataaagtttc tcccctctct ctgatttgag
    15661 gttcattcag aacatcaaat cagagagagg gtaaaaaagg agttcaaaat gttaaaaggt
    15721 attcacccgg caatttctcc agatttatta aaagtcttag ccgaaatggg gcacggcgat
    15781 gaattagtgc tttctgatgc acacttccct gctcactcta ttcatcaaaa cgtcattcgt
    15841 gcagatggct taagtgttgc caccttatta gaaggcattt ctgctctgtt tgaatttgac
    15901 caatacgttg aagccccact tgcaatgatg caagcagtaa aaggcgacac gctcgatcca
    15961 agcgttgaag agcgttacct caatgcaatt aaaaaagtaa acggaacagc cccgaaaata
    16021 gagcgtgtag aacgcttcgc tttctatgat agagccaaaa acgcttatgc cgttgtcatt
    16081 acaggcgagt tagccaaata cggcaacatt attatcaaaa aaggcgtaac accggtttaa
    16141 ttacaagcgg ttaaaaaagc agaatttttt acaaatataa aattaaaagg agttcaacaa
    16201 tggacagaaa aatactggcg agacaaatca ttgatacttg tcttgaaatg acccgaattg
    16261 ggttaaatca aggtacagca ggcaatgtga gcgtacgtta taaagacggt atgctcatta
    16321 cgccaacagg tacaccttat gagcaaatga ccgaagattc tatcgtcttt gttgatggca
    16381 acggcaaaca cgaagaggga aaactccctt caagtgagtg gcagttccat ttagcggttt
    16441 atgaggctcg ccctgaatta aatgcggtag ttcacaacca cgctaaaaac tgtgccgcag
    16501 tgtctatttt aggtgaacct atccctgcca ttcactatat gatcgcctgc accggcacta
    16561 atcacattcc ttgtgtacct tatgccccgt tcggcactca ccaattagcc gactatgtac
    16621 gtgaaggcat taaacacagc aaagcaattt tactcgctca ccacggctta atcaccgcag
    16681 ataaaaccct cgaaaaagcc ctcggcatcg cccacgaggt ggaagtgatc gcagaatggt
    16741 atttgaaact gctcgctaca ggaaaaccta tcccaacgct aaacaaagaa caaatggata
    16801 tcgtactcgg aaaatttaag tcctatggtt cttgggtgga aagcgaacaa tagcctgcca
    16861 taaataacat acaagcggtg atatttctta aaatttttac aaacggagtg cagtatgcaa
    16921 aatgaagtaa tactcacgat gaaaaacatc agtaaatcct ttgcgggggt caatgcgtta
    16981 aaaggtgttg agcttacgct gcgtaagggc gaagttcacg cattaatggg cgaaaacggt
    17041 gcaggtaaat ccaccttgat gaaatgcttg ctgggcgtat atcaagccga tgaaggtgaa
    17101 atcatatata aaggtcagcc tgttcgcttt gagtcggtat tagaggcaca aaaagcgggc
    17161 attagtatga ttttccaaga actgaacctc attccccatt taacggtggc agagaatatt
    17221 ttcttcgccc gtgagccact caaacacggt ttagtggata aagacaaaat ggtggaagaa
    17281 tcggctaaat tgctgaattt ctttgagatt gatgttgatc caaacgatga agtgagaatg
    17341 ttgtcggtag ccaaacaaca gatggtagaa attgccaaag ccctttcatt tgatgtggaa
    17401 gtactgatta tggacgagcc gacctccgct cttaccgaaa aagagatcga taaattattt
    17461 gaattggtcg atagactgcg tgccaaaggg gtgagcattg tctatatttc tcaccgaatg
    17521 gaagaattaa aacgtatctg taaccatatt acgattttcc gtgatggcac ctatgtatct
    17581 aaccataaat tcaatgaaat cacgatggat gagatcatta ccaaaatggt tgggcgttca
    17641 ttggataacc atttcccacc aaaaaccgct gtggtgacaa acgacattat cctctcgatt
    17701 atgaatgctg aacgtaaggg agtgtttgaa ccattgaact ttgacttacg caaaggagaa
    17761 attctgggca ttaccggctt ggttggagca aaacgtactg aactggctcg agccatcttc
    17821 ggagcagacc cacttgatag cggtgagatt tttgtgcacg agaacaaagt cagcattaaa
    17881 gatccgagtg atgcaattaa agccggtata gcctatttgt cggaagaccg taagctcaat
    17941 ggtgttgcag taagaatgtc gattcgtgag aatatcacga tggcatctat ggataaagtt
    18001 gccaatcaaa taggtgtgat ttcttacgat gaagaagaaa aagcctcaaa aactttcatc
    18061 gacaaaatgg aaatcaaaac cccaacgatt gagcagaaag ttcaaaactt aagtggtggt
    18121 aaccaacaaa aagtggtaat tggtaaatgg ttattccgtg aagcaaaagt gatgattttt
    18181 gatgagccga ctcggggaat tgatgtcgga gcaaaatatg ctatctatca actgctcgat
    18241 gagcttgctg ccaatggcgt gggtgttatc gtgatctctt ccgaattgcc tgaagtcttg
    18301 ggagtttccg accgcatcat tgtaatgcgt gaaggtagaa tgacaggtat gctcgagact
    18361 aaaaaaacca accaagaaga aattatgcat tatgcaactg gtgttaaaaa tatgtttgct
    18421 cgtgaatatg gggtggaaaa atgaatgaaa aacaaaaaga aatgttaaga aaaatggctg
    18481 cattggctgg cttagtacta ttaatcatct ttttcagcgt aaccaatgaa tacttcttta
    18541 cctccaataa cattatgaca gtagggctac aaacctctac cattgcgtta attggtattg
    18601 gggcaacctg tgtgatctta accggtggaa ttgatttaag taccggttca gtagttgcac
    18661 tctccggtgt ggcagctgca atgattgtaa atgccggtgt acccgtacca ctaggaatga
    18721 ttttagggat tttggtcggc ggtatttgtg gcttaatcaa cggcatttta gtcaccagaa
    18781 tgaaattgcc tccgtttatt gctaccctcg gtatgatgat ggttgcccgt ggtttagcat
    18841 tgtatgttac caatgccgca ccagtttccg gaatgcctga atcctttgcc aatctcggta
    18901 acggagcatt atttaaaatt gtggaagaag gggcaaacgg cttgccgaaa gtggtatttg
    18961 caggtattcc ttaccctgtg attattatga tctttattac cgtactattc actttcgctc
    19021 tctctaaact gaaagtcgga cgctatcttt acgcaattgg ttctaacgaa gaagccgcac
    19081 gcttatccgg cattaaaacc aatattgtca aaatctatgc ctatgttgcc agtggcttac
    19141 tctctggttt aactggcgtt atccttgcct cccgcctcgt caccgcccag ccaaacggtg
    19201 gggtctctta cgagctggat gcgattgcca gtgctgtggt gggcggcaca tcgcttatgg
    19261 gcggtgtggg tactatcccc ggcacactca tcgggtcatt cattatcggg gtactccgta
    19321 atggtttgaa tatgaatggc gtttcttcat ttgttcaaat gattgtcatc gggcttgtga
    19381 ttatcgtggc ggtctctctc gaccagctcc gccaatccaa aaaagccggt aaaaaataat
    19441 ccactcttaa aggagaatta aaatgaaaaa atcagcatta tttactgcga ccctctttgg
    19501 tttatcgacc ttatttgcag gcagtgcaat ggcaaaatct gatgaaatcg ctgtgattgt
    19561 gaaatctgcc aactctacct tctggcaaaa cgtgcgtaaa ggggctgaaa ctgccggcaa
    19621 agatattgga ggacaataca aagtcacctt ccaagggccg gaagccgaaa cagcgattga
    19681 cgcccaagtg aatatggtgg acaacgccgt aaaccgtggc gtggcaggca tcgtactggc
    19741 tgcctcagac ccggtagcat tagtgccggc ggtgaaaaaa gcttatgaga gtggcattcc
    19801 ggtggtgctt atcgattccg gcatcaacag tgacggcaaa tactaccaat ctttccttgc
    19861 caccgacaac cgtgcagcag gtaaattagc agcggaaaaa ctgcttgcca aagtcaaagg
    19921 cggcaaagtg gcagtgatga gctttaccca aggggcagca tcagcgattg agcgtaccgg
    19981 tggttttatt gacgaaatca aagcaaaagc cgattacaaa ctggtcggcc cgtactactc
    20041 cgattcggat atgaccaaag cgttaaacca aaccgaagac gtattaggtt ctaaccctga
    20101 tcttgcagcg atcttcgggg cgaacgaacc gactgcggta ggaatggcac gagcggtgaa
    20161 acaaaaaggc tttgccggca aaattgtagc ggtgggcttt gatggaaact ccgacctaca
    20221 aaacttcgtg cgtgacggaa cactagacgg catcgtggtg caatcttcct accaaatggg
    20281 ctataaaggc gtggacacca tcggcaagct gattaaaggc gagaaagtcg aaaaagtgat
    20341 tgataccggg gtggtttatg tcacgaaaga aaacattgat agcgaagaag cgaaaggtgt
    20401 tctttactaa cattcaagtt aaacggggtg gggttgccca ccctttcagc cgaaaggaag
    20461 ccaatatgtc aaataccctt accgataaag ccttagtggt gattgccgca cttggcggtc
    20521 gagaaaatat tgtcgatgtt tacgcctgta ttacccgcct acgtgtggag gtgaaaaata
    20581 ccgacattgt ggaatgggat aaaattaaat ctgtcggtgc gttaggcgtt gtgacctcag
    20641 gctcagttat tcaatctatt tttggtagcg atgccgaagc ctaccgtgat gaaatcaaac
    20701 gtattttgaa tatttagcct aagcacactc acaacaaaag aatcgcaaca agcggtgaaa
    20761 tttttatcaa aatttgcaaa aaaatgacgt aatttgaccg cttgcaagtt aatcgaattg
    20821 tttaactttt aagaaggaaa atagtatggc aaatcgtctt atcctcaatg aaaccagtta
    20881 ccacggcaaa ggagcaatcc aaaatattgt tcacgaagtg accagccgga gtttcaaaaa
    20941 agcccttgtg gtaacagaca aagacctgat caaatttaac gttgcccaaa aagtcaccgc
    21001 cttgcttgat gccgcaggct tgccttatga gattttcgat gaggtcaaag ccaacccggc
    21061 agtcgatgtg atcaaagcgg gggtcgcaaa attcaaagcc tccagtgccg attatttaat
    21121 tgcgattggt ggcggctcac cgattgatag tgccaaagcg attggtatta tcatcaataa
    21181 ccctgagttt agcgatgtac tttcattgga aggtgtcgcc ccaacccacc aaaaatgtgt
    21241 gccgattatc gccattccaa ctaccgcagg tacagccgca gaagtcacga ttaactatgt
    21301 cattaccgat gaagcgaaaa aacgcaaatt tgtgtgcgtg gacgttcacg atgtgccggc
    21361 agtggcgtta gtcgatccag atatgatgga atctatgccg aaaagcttgg ctgccgcaac
    21421 cggtatggac gctctcaccc acgccattga aggctacatt accaaagcgg cgtgggaatt
    21481 aaccgatgct ctacacctta aagcgattga gctgatcggc cgttcattgc gtggtgcagt
    21541 ggagaaaaat ccgaaagatg tcgaggcaat ggcattggga caatatgtgg ctggaatggg
    21601 cttctccaac gttgggcttg gcgcggttca cagtatggca cacccgcttt ctgcctatta
    21661 cgacacccca cacggcattg ccaacgcagt attactgccg tatgtgatgg aatttaataa
    21721 aaattacacc ggcgaaaaat accgtgaaat tgcccgagca atgggggtaa aaggcgtaga
    21781 tgaaatgagc caagaagagt accgcaacgc cgccattgct gccgtacaac agctttcaca
    21841 agatgtcggc attccgccaa aactgcatca aatcggcgtt aaagaagccg atttagcggc
    21901 attatcggtc gatgccttta atgatgtctg caccggtggc aacccgagag attgtacggc
    21961 tgaggagctg ttggaggtat atcggatcgc atactaagtt ctatctttgt taaatagaca
    22021 agcggtgatt ttttaataaa aatttgcaat ttctgttaaa aaaatactga tagtcataat
    22081 gcccgatttc tcatatttat ggaaaaatcg ggcattttcg ttgctttttt atcgc
//
LOCUS       DANLXO010000032        22001 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.032, whole genome shotgun sequence.
ACCESSION   DANLXO010000032 DANLXO010000000
VERSION     DANLXO010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22001
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.032"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(90..761)
                     /locus_tag="PXD69_001054"
     CDS             complement(90..761)
                     /locus_tag="PXD69_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDL6283264.1"
                     /translation="MLQAIIFDMDGVIVDTEYLEFSLQKQFIEDIKEHSRPITLEQQS
                     EVVGKCLKEIPVIIKKLSESSLPIEEIRARYYAFFQDLFSKVDFKTIFRADIQQIIQF
                     AKQNQIKLAVASSSALSHIENILTVCGIKDEFDLIVSGEQFEHSKPDPTIYRYTCEKL
                     GVEPQNAVAIEDSYYGMLAAKTAGLTVIGYEEKRILIDQSLADYMGKDMKEILKILQK
                     CNTPS"
     gene            complement(882..2345)
                     /gene="guaB"
                     /locus_tag="PXD69_001055"
     CDS             complement(882..2345)
                     /gene="guaB"
                     /locus_tag="PXD69_001055"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDL6283265.1"
                     /translation="MLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIVSEPVTISP
                     DMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTRFVTDLSKTVREFMTPKDRLV
                     TVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKAESKPNACKDEFGRL
                     RVGAAVGAGPGNEERIDALVKAGVDVLLIDSSHGHSEGVLQRVRETRAKYPDLPIVAG
                     NIATAEGAIALADAGASAVKVGIGPGSICTTRIVTGVGVPQITAIAEAAAALKERGIP
                     VIADGGIRYSGDISKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRIAYKGYLKEIIHQQMGGLRSCMGLTGCATI
                     EELRTKAEFVRISGAGIKESHVHDVTITKEAPNYRMG"
     gene            complement(2573..5740)
                     /locus_tag="PXD69_001056"
     CDS             complement(2573..5740)
                     /locus_tag="PXD69_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDL6283266.1"
                     /translation="MKFTDIFIKRPVLAVCISLLITILGLQAIEKLQVREYPEMTVSI
                     VTVSVNYSGADARLMQTLVTSQLEEAVAQADNIDYMTSSSSPSTTTVTAKMKLNTDPN
                     AALSDISAKVNAVRSNLPSGIDDPSIRVSTGSNDALMYIRFVSDELNTSQVTDYINRV
                     VKPQFFTVNGVSSVDVYGSVFGLRIWLDPDKMASNNLSGAAVLSALSANNLQTAAGNS
                     NGYYTVYRNKVLSTTPSVTELEEVTVSTTKDGKTIKLKDIATVELDKYQDAARATVGG
                     KDAVVLAVSVAATANSLTVAKDIYPMFEQVLKNLPSTIQGDIVYDKTIAIDSSIKEVI
                     KTIGEATVIVLVVIILFLGSLRAMIVPVITIPISLIGVLFFLQMFGFSINLLTLLALV
                     LAIGLVVDDAIVVLENVERHVKEGKTPFDAAIIGTREIALPVISMTITLGAVYSPMAL
                     MTGVTGTLFKEFALTLAGAVFISGIAALTLSPMMSSRILKEHKEGEESAFARVVHRSL
                     DKMTSCYTNMLSGIMAVRGFVLFFAVLIFASLPMLFGSLSSEVAPTEDRGFVVGISNG
                     PSNTNLDYTEAALAQFNQEVTKLPEVSSLMTVSGFNGANSALSIIALKDWNDRSRERA
                     AISNDVAAIGKKVVGMDVNAIAFPEISTGENDLPFSLVITTADSYEKLAIVASEFLKK
                     AQTSGQFFFANLDLKFDTVTMNMKFDREKMGAYGVTMQQVSGTLGAFLSGAIITRVDI
                     DSRAYPIVSQAVRNDRLNPEDLMNYYVTTATGQSIPLGSFVTMELKTSPSSLPRMSQL
                     NSATIGGVVSGSIGDAVNWAKAELDRTLPSGYQYDFRGESRQFVQEGNAMAMTFALAV
                     IIIYLVLAIQFESWRDPLVILVSVPLAVSGALLVMNIPTAMKGLFMGIAAGTGSKDMM
                     AFANGIWTAGYTLNIYSQVGLITLVGLITKHGILMCEVAKEEQLLHGKSRYEAIFHAA
                     TIRLRPIMMTTAAMIAGLIPLLFAVGAGAIARFSMGMVIVAGLAIGTLFTLFILPVIY
                     TFLGQEHKPLREFDEEKYFPTTKEA"
     gene            complement(5754..6959)
                     /locus_tag="PXD69_001057"
     CDS             complement(5754..6959)
                     /locus_tag="PXD69_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL6283267.1"
                     /translation="MTTETQKLGKGRKFLIVLTLLIVLIVFAAIVGLQKIGAMKKAEA
                     AANMPEAVSEVTAMQVTTQEWTPTISAVGYIRPNQGAMLSAETSGVVSRVLVTSGQRV
                     KKGDLLVEFDSSVEIANLRASEAQLPNAKANLERYRNLIASNSASKAEFDNAQSTYNQ
                     LLANIEALRATIKRRQIYAPFSGLAGIVNVNVGQYITMGTEIVRVEDQSSMKVRFTLP
                     QTNLEQISIGQKVTAVIDALPAQTFPAKIVAIDPAVDRLTGLINVEAVIEEGQEKLLS
                     GMFARLNVALPTETGQIVVPQISIAYTMYGETVYVLQPLSDEDKEMVNKMAVQNPSLD
                     VNKMYRAKQMEVKTADRKGNYSQLSKGVKAGDLIVTGGLQRLSNNALVKVSDTEAVGI
                     TTPAKNSKL"
     gene            complement(6990..7562)
                     /locus_tag="PXD69_001058"
     CDS             complement(6990..7562)
                     /locus_tag="PXD69_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDL6283268.1"
                     /translation="MSRRSEPKEEMVNRILSATESLIVQEGLQNLSMRSIAKEAGIAS
                     GTLYLYFKTKDDLLHSLAAQLLECYNGYMHFEFKPEMALFEQYKALVNKKWQFLIERL
                     DLVKQFQAVIGIDELIRETIADETSFWNKLILEGKKQRIIADLSNELLYGLSIGTLVD
                     IQYLQNLNQENQFDGYLDEIILRTWKAITF"
     gene            7801..8022
                     /locus_tag="PXD69_001059"
     CDS             7801..8022
                     /locus_tag="PXD69_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1414 domain-containing protein"
                     /protein_id="HDL6283269.1"
                     /translation="MATKSKYHTKQFEQLLADLIATIEKHKAPVDLSLMALGNMITNI
                     LIENIQSPAQREALADAFADALKQSLKTK"
     gene            8027..9760
                     /locus_tag="PXD69_001060"
     CDS             8027..9760
                     /locus_tag="PXD69_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3413 domain-containing protein"
                     /protein_id="HDL6283270.1"
                     /translation="MFARLRSLLPTNSRQYREETSQKITWGHWFALFNIVLALLISSR
                     YAFNADWPNTLVGKLYFFVSLFGHFSFVVFAGFLLILFPLSFIVKNHRTYRGLSVILA
                     TIGQTVLLVDTEVFKQFYLHLSPLVWDLLVNPEEGELTRKWQLLFVPMPLLLLAEMLY
                     SRWCWQKLRSFSRQKWGKYVALFFVISFTATHLIYAWADMNAYRPITAQRANYPLSYP
                     MTARNFLEKHGFIDRVEFNQEIEESGRLDTFYLNYPKSPLIATKTPSTNILLINLSGL
                     SKQIINAETMPKLTEISQQSHRFMQHYSSGDSASAGALGLFYSLSGKYLDSVLADKTV
                     SPLIEIARKSDYQLGLFSHNGFADPIYHQAIFSGILLPTAHSNVGAIGQWKNWISSRS
                     LENPFFSYLDLRMPFAHTAQEQAKLLDWQFAEIWQHLTQNALLANTLVIITADISNEV
                     GAENSFDKQHIQVPMMFYWQGESKEYHFLSSHLDIMPTLLSQFFGVQNPLNDYAQGMD
                     LSTQNQRLWVSSSNHKWNVAIMPNGDQYQIDRKGNFKHFNSNGEHEKDARPPLALFLQ
                     MIQQSNQFIEK"
     gene            complement(9827..10528)
                     /locus_tag="PXD69_001061"
     CDS             complement(9827..10528)
                     /locus_tag="PXD69_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283271.1"
                     /translation="MIGQALGWRATFGIIGIIALIVLMMIWRLLPYLPSKNAGSIKSL
                     PLLFKRPMLIGIYLLVALIVSGHFTAYSYIEPFMIKISSVSVENTTFILLVFGLAGVV
                     ASFLFGRLYGKAPNKFILSGIAIIMCSQLCLLFLSDSTVAMFMVAFVWGIGITGMSIA
                     LQMKVLELAPDATDVATAIFSGTYNLGIGGGALLGSIAIQQLGLANIGFAGGSIAFVA
                     MVWFVFVSLKYRQLR"
     gene            complement(10525..10905)
                     /locus_tag="PXD69_001062"
     CDS             complement(10525..10905)
                     /locus_tag="PXD69_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283272.1"
                     /translation="METLAIFLFSEIWKFDFVFTFIFKILKINVFFSDLINMKLARKA
                     QRRLSFLRVFSLAFAAFIVNTTEFIPIALLSDIASSFQMEPSSAGIMMTVYAWVVFLL
                     SLPLMLLTANMERKRLLLMLFMGE"
     gene            complement(10947..15407)
                     /gene="mukB"
                     /locus_tag="PXD69_001063"
     CDS             complement(10947..15407)
                     /gene="mukB"
                     /locus_tag="PXD69_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HDL6283273.1"
                     /translation="MIDTTELQNNPQIAPLARPNDVQRGKFLSLTLINWNGFFARTFD
                     LDDLVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTAGSRDKGLYGKLK
                     AGVCYAVLESFNSRGQRIITGVRLQQIVGRDKKVDIRSFSLQNIPQEQSIISLLTEQV
                     GNKARVLALNELKDQFENSEVQFKQYHSITDYHSFMFDLGVIPKRLRSAADRSKFYKL
                     IEASLYGGISSVITKSLRDYLLPENTGVRQAFQDMESALRENRMTLEAIKVTQSDRDM
                     FKRLITESTNYVSADYMRNANERRGNVQQALEQRKEWYAAKSKILLEQQRFVEFSRES
                     ADIAEAELALEADYNSANDHLNLVMNALRHQEKIERYQDEVEELNIKLEEQQEALEEI
                     AEIAENAQARADEADDHVEELRSQMADYQQALDAQQTRALQYQQAVNALEKAKQLTGL
                     VNLDLNNIEDYHAEFVAQAEDLTDQVFELEQRLSVSDMAKTQFEKAFELVCKISGEID
                     RLQAWEEARALLSAFPEQKMQAQQAVSLRQKLNDLEQRLQQQQNAQRLVAEFNQKSQQ
                     QLNSAEELDAYFEEQQARLEDLEAELSDFVEQRSTQRQQREQLNQQYQQLAKNAPAWH
                     TAQSALTRLEEQCGEKFEASQSVMQFMQNMLSKEREATLARDELARKEQMLDEQINRL
                     SQPDGSEDARLNQLAERFGGVLLSELYDDVSIEDAPYFSALYGEARHAIVVRDLEAVK
                     TQLEKLDDCPSDLYLIEGDPSAFDDAVFSAEELGEGVVVKVSDRQWRYSKFPEVPLFG
                     RAAREKHLATLKAERDETAEKHAERAFDVQKCQRLHQHLSQFIGTHLNLAFQENPEML
                     MQEIAAERAEIERELAQSAGNEQQLRHQLESVKAQLQMLNKILPLANLLADETLEARA
                     EECREQLELAEEDEMFIRQFGATLSQLEPIAAALKSDPALFEQLEADYRRSVAEQKVL
                     QQKVFSLADVMNRRLHFSYQETVGTEGSALTEQLRQRLENAQREREQARDQLRQAQAQ
                     LSQYNQVLTGLRSSYEAKNQMLQELIREIDDLGVRGDSGAEERARFRRDELQQRLSQQ
                     RSRKGYLDKQIAVIEAEMDNLNRTLRKAERDYHTQRELVVQAKASWCIVQRLSRNSDV
                     EKRLNRRELAYQSAEELRSISDKALGALRTAVADNEYLRDSLRASEDSRKPENKVAFF
                     IAVYQHLRERIRQDIIKTDDPIDAIEQMEIELSRLTNELTGREKKLAISAESVANILR
                     KTIQREQQRILQLNQGLQNIAFGQVKGVRLVVNIRDTHAILLNALSNNREEHKDLFDS
                     QKLSFSEALAMLYKRVNPHIEMGQRTPQTIGEELLDYRNYLDLEVETFRGADGWMRAE
                     SSALSTGEAIGTGMSILLMVVQSWEEEARRMRAKDILPARLLFLDEAARLDATSINTL
                     FELCERLDMQLLIAAPENISPERGTTYKLVRKITNNQEYVHVVGLKGFAK"
     gene            complement(15583..16299)
                     /gene="mukE"
                     /locus_tag="PXD69_001064"
     CDS             complement(15583..16299)
                     /gene="mukE"
                     /locus_tag="PXD69_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HDL6283274.1"
                     /translation="MTENIQDFISPKLALAIANPIFPELDSQLRAGRHINTEQLDQHV
                     FLMDFQAELESFYRRYHVELIRAPEGFFYLRPKASTLIARSAMSEMEMLVGKVLCYLY
                     LSPERLAQQGIFSQDDVYEELLSLADESKLLKAVNPRSTGSDLDRAKLAEKAGGALRR
                     LARIGIITRVGEQNSKKFVISESVFRFGADVRTGDDPREAQLRLIRDGEATTPALLNE
                     QAVEIDENIADEAPFDGENE"
     gene            complement(16348..17691)
                     /gene="mukF"
                     /locus_tag="PXD69_001065"
     CDS             complement(16348..17691)
                     /gene="mukF"
                     /locus_tag="PXD69_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HDL6283275.1"
                     /translation="MQNELAQTIPELISWTKDREFSLSLSSDRLAFLLAISIYNQEQT
                     DGELLESDLIDLFRYVSNSFEQSDATFTQRANNAINDLVRQRLLNRFSSEFTEGLAIY
                     RVTPLGVGISNYYVRQREFSTLRLSIQLSIVADEIQRASVAAEEGIEQAQDERFWRNN
                     VFAPLKYSVAEIFDSIDLSQRIMDENQHQIRERIAELLSQNWHEAIMSCEQLLDETSG
                     NLRELQDTLNAAGDKLQAQLLRIQSCLMARNDLDFIDQLIVNLQNKLDRIISWGQQAI
                     DLWIGYDRHVHKFIRTAIDMDKNRVFGQRLRQSIQDYYNSPWLLYTAKADSLLDLRDD
                     EAMLNEAESVGELPSELEYESLSDVQEQIVSAMQAHLAPFRAEGKPIDLGVILREQLA
                     RFPESRHFDVARIIVDQAVKLGMASQDSQAVYPQWQPINEQGAEVQANVIDQYNK"
     gene            complement(17956..18843)
                     /gene="galU"
                     /locus_tag="PXD69_001066"
     CDS             complement(17956..18843)
                     /gene="galU"
                     /locus_tag="PXD69_001066"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDL6283276.1"
                     /translation="MKVIIPVAGLGTRMLPATKAIPKEMLILADKPLIQYIVNECVAA
                     GFKEIVLVTHSSKNAIENHFDTSFELETMLEKRVKRQLLDDVRSIVPKDVTLIHVRQG
                     QAKGLGHAVLCGRTVVGDEPFAVVLPDVLLGEFTANQKTENLAAMVKRFQETGYSQIM
                     VAPVPMENVSSYGVADCHGVDIPLGGAAPIAKMVEKPSIEEAPSNLAVVGRYVFSSNI
                     WNLLEKTPVGVGDEIQLTDAIDMLIHQETVEAFHMTGRSFDCGYKVGYMKAFVEYSLN
                     HDKCGKEFKAFIKELAKSL"
     gene            complement(18979..19164)
                     /gene="csrA"
                     /locus_tag="PXD69_001067"
     CDS             complement(18979..19164)
                     /gene="csrA"
                     /locus_tag="PXD69_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDL6283277.1"
                     /translation="MLILTRKIGEVLLVGDDVEITVLSIRGNQVKLGVNAPKEISVHR
                     REIYERIKASVEEENAE"
     gene            complement(19254..21881)
                     /gene="alaS"
                     /locus_tag="PXD69_001068"
     CDS             complement(19254..21881)
                     /gene="alaS"
                     /locus_tag="PXD69_001068"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDL6283278.1"
                     /translation="MKTTSDIRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMN
                     QFKDVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYF
                     KQDAIKFGWEFLTSPQWLGLPKEKLYVTVYETDDEAYDIWHKEVGVPSEHIIRIGDNK
                     GAPYASDNFWAMGDTGPCGPCTEIFYDHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQF
                     NRLADGTMEKLPKPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVATLLNVKDLD
                     NKSLRVVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRAVRHGNILGAKEAFFYKLV
                     PTLATVMGQAGEVLTQKQAHIQKTLKAEEEQFARTLERGLNLLEEALAKVENNTLSGE
                     VAFKLYDTYGFPLDLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGTDYNNVIK
                     VDSKTCFSGYTETSLNDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGD
                     SGQISAEICNFEVVDTQKYGQVFGHIGQLTSGSLSVGDKVNTIVDRERRHAITLNHSA
                     THLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENI
                     QVIIEEMDIESAKAKGAMALFGEKYGEVVRVVEMSDFSIELCGGTHVKQTGDIGLFKI
                     TSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLKADSHSFVEKIVQLQEKAK
                     RTEKELQQLKDKLAAQAGSDLAKQATQINGVNVVIQQLENVEPKALRTMVDDLKNQLG
                     SAVVVFATTAEDKVNLIVGVTKDLTDKVNAGQLVGAMAEKVGGKGGGRPDMAMAGGSE
                     PQHLLQALSLAQEWITAKL"
BASE COUNT         6231 a         5049 c         4134 g         6587 t
ORIGIN      
        1 tctcatttct aggttactca agccgataga ctgttccaag tacttgaagt agaaacattg
       61 acaaaatttc tataaaaatc gaccgtttat taacttggag tattacattt ttgaagaatc
      121 ttcaaaatct ctttcatatc tttgcccata taatccgcta aactttggtc aatcagtatt
      181 cgtttttctt cgtaaccaat caccgttaag cctgcggttt tggcggcgag cattccgtag
      241 taggagtctt caatcgccac tgcattttgt ggctcaacgc ctaatttttc gcaggtgtag
      301 cggtaaatgg ttgggtctgg cttgctgtgt tcaaactgtt caccgctgac gattaaatca
      361 aattcgtctt taatgccgca aaccgtgaga atattttcaa tatgcgaaag ggcggaagaa
      421 gaggcaaccg caagcttaat ttgattctgc ttggcaaatt gaataatttg ctgaatatcg
      481 gctctgaaaa tggttttaaa atccactttg ctaaacagat cttggaaaaa ggcgtagtaa
      541 cgtgcacgaa tttcctcaat cggcaaactg gattcgctta gttttttgat aatcaccgga
      601 atttctttta aacatttgcc taccacttcc gattgttgtt ctaaagtaat cgggcggctg
      661 tgttctttga tgtcttcaat aaactgtttt tgtaaggaaa attccagata ttcggtatcc
      721 acaatcacgc cgtccatatc aaaaatgata gcttggagca tatagcctct tttgtaaaat
      781 tttaagaaaa tctaaccact tattccctct ctctgtttta aattactgaa cgtaatttaa
      841 aacggtctct ctcccacaag gggagagagt gagaaaggct attaacccat tcggtagttc
      901 ggtgcttctt tggtaattgt cacatcgtgg acgtggcttt ctttaatacc agcaccacta
      961 atgcggacaa attctgcttt ggtgcggagt tcttcaatag tggcacagcc ggttaatccc
     1021 atacaggagc gtaagccgcc catttgttgg tggataattt ctttcaagta gcctttgtaa
     1081 gcgatacgcc cttcaatccc ttccggtacg agcttgtcgg cggcattatc agattggaaa
     1141 tagcgatctg acgagccttt actcattgca cctaatgatc ccattccacg gtaggatttg
     1201 aatgctctgc cttgataaag ctcaatttca cccggggctt cttctgtgcc ggcaaacatc
     1261 gaaccgacca ttacgcaact tgcaccggcg gcaatagctt ttgaaatatc gcctgaataa
     1321 cgaattccac catcagcaat cacaggaatg cctcgttctt taagcgcagc tgccgcttct
     1381 gcgattgccg tgatttgtgg cacgccaacg cctgttacaa ttctggtggt acaaattgaa
     1441 cccgggccga ttcctacttt cacagcactg gctcctgcat cagctaacgc aatcgctcct
     1501 tctgcagtgg caatattacc ggcaacaatc ggtaaatcag ggtattttgc acgggtttca
     1561 cgcacacgtt gtaatacacc ttcagaatgc ccgtgcgaag agtcgattaa tagcacatcg
     1621 acacccgctt ttactaaagc atcaattcgt tcttcattgc ccggaccggc tcccactgcc
     1681 gcccccacac gcaaacgccc aaactcatct ttacaggcat tcggtttgct ttccgctttt
     1741 tggtagtctt ttagggtaat cattcctttt aactgaaatt cattattcac taccagcact
     1801 ttctccactc ggtgttcgtg cattaagtgg aaaatttctt cacggcttgc gttttctttt
     1861 accgtcacta aacggtcttt tggtgtcata aattcacgca ctgttttgct taaatccgtg
     1921 acaaatcggg tatcacgtcc ggtaataatt cccactaaat tttggttttc atcaatcacc
     1981 ggatagcctg caaaaccgtt ctttttcacc aattcagcca attccgctaa tgtcatatca
     2041 ggagaaatcg tcactggctc agaaacaata ccactttcaa attttttcac tttacgcaca
     2101 cggtctgcct ggcgttcaat cgacatattt ttatggataa aaccaatgcc gccttcttga
     2161 gcaagggaga tcgcaagctt agtttctgta acggtatcca ttgcagcaga aagcatcgga
     2221 atgtttaaac gaatggtttt agttaattga gtagaaagat cagcagtatt aggaagcaca
     2281 gtagaatgtg ccgggacgag aagaacatca tcaaaagtga gggcttcttg tttaattcgt
     2341 agcattgcaa ttattcctta aaaaatgatt aaattgaaaa tctgtactgg aaaattgcga
     2401 gcggattata cagaggaact aggtttctgt aaatagggaa acgtttacgc tatctgaaaa
     2461 tatactttca agcggttaaa ttttgtgatt ttttagcaaa caataaataa aaaacgaccg
     2521 cttgtaagcc aacaaaaaag agcgtatcgc tacgctcttt tgctatttaa aactatgctt
     2581 cttttgtcgt tgggaaatat ttttcctcgt caaattcacg taatggcttg tgttcttgcc
     2641 ctaagaaagt gtagataacc ggcaagataa acagagtaaa caatgtcccg attgccaagc
     2701 ctgctacgat taccataccc atactgaagc gggcgattgc accggcaccc accgcaaaca
     2761 gaagcggaat taagcctgca atcattgctg ccgttgtcat cataattggg cgtaaacgaa
     2821 tcgtggctgc gtggaaaata gcttcatagc gtgatttgcc gtgcagtaac tgctcttctt
     2881 tcgccacttc acacatcaag ataccgtgtt tagtaattaa gccgacaagg gtaattagac
     2941 ctacttgtga atagatattt aaggtataac ctgccgtcca aataccgttg gcgaatgcca
     3001 tcatatcttt cgagccagtg cctgctgcaa tccccataaa caagcctttc attgcggttg
     3061 gaatgttcat taccaacaat gcaccactca cagctaacgg cacagaaacc aaaattacta
     3121 atgggtcacg ccaagattca aattgaattg caagtacaag atagataatg ataactgcta
     3181 gagcgaaagt cattgccatc gcattacctt cttgaacgaa ctggcgagat tcaccacgga
     3241 agtcatattg ataacctgat ggtaaagtgc gatctaattc tgctttcgcc caatttaccg
     3301 catcgccgat tgagccagat actaccccac caatggtggc cgagtttaat tggctcatac
     3361 gaggtaaaga agatggtgat gtttttaatt ccatcgtcac aaatgaacct aacgggatag
     3421 attgccctgt tgcagtcgtg acatagtaat tcattaaatc ttcaggattt aaacgatcat
     3481 tacgcaccgc ttgcgacaca atcgggtaag cacgagagtc aatatcgaca cgagtaataa
     3541 tcgcaccgga taagaatgcc cctaatgtgc cactcacctg ctgcattgtc acgccataag
     3601 cacccatttt ttcacggtcg aatttcatat tcatcgtgac cgtatcaaat ttcaaatcta
     3661 aattcgcaaa gaagaactga ccggaagttt gggctttttt caagaattca gaggcaacga
     3721 ttgccaattt ttcatagcta tcagcggtag taatcactaa tgagaatggt agatcatttt
     3781 caccggttga aatttcaggg aatgcaattg cattcacgtc catacccacc acttttttac
     3841 cgattgcagc cacatcatta gaaatcgcag cacgttcacg gctacgatca ttccaatctt
     3901 ttaatgcaat aatcgataat gcactatttg caccattaaa gcctgaaact gtcattaagg
     3961 aagatacttc aggtaattta gttacttcct gattaaattg ggctaacgct gcttcggtat
     4021 aatctaaatt ggtgtttgaa ggtccattag aaataccaac cacaaagcca cggtcttctg
     4081 tcggtgcaac ttcactggaa agtgagccaa ataacatcgg taaactggcg aagatcagca
     4141 ccgcaaagaa taagacgaaa ccacgaacag ccataatacc gcttagcata ttggtatagc
     4201 agctggtcat tttatctagt gatctatgca ccacgcgggc aaatgctgac tcttcccctt
     4261 ctttatgttc ttttaatatt cggctagaca tcatcggcga aagggttaat gccgcaatcc
     4321 ccgaaataaa taccgcaccg gcaagcgtta aagcgaactc tttaaatagt gtccctgtta
     4381 ccccggtcat taatgccatt ggtgaatata ctgcacccag agtaatagtc attgaaataa
     4441 ccggtaaagc aatttcacgt gtaccgataa tcgctgcatc aaatggcgtt ttaccttctt
     4501 taacgtgacg ttctacgttt tcaagtacga caatcgcatc gtccactacc aagccgatcg
     4561 ctaataccaa cgccagcaaa gtaagcaagt tgatcgagaa accaaacatt tgcaggaaga
     4621 ataatacccc gattaaggaa atcggaatgg taatcaccgg tacaatcatt gctcgtaatg
     4681 aacctaagaa caggataatt actaccaata caatgacggt tgcctcacca atagttttaa
     4741 ttacttcttt gatagaacta tcaatcgcaa tggttttatc gtaaacaata tctccttgaa
     4801 tggtgcttgg tagatttttt aatacctgct caaacatcgg ataaatatct ttcgctacgg
     4861 ttaaagagtt tgccgttgcg gctaccgaaa cagcaagcac aactgcatct ttaccgccaa
     4921 ccgttgctct tgctgcatct tggtatttat ccagctcaac agtcgcaata tcttttaatt
     4981 tgatggtttt tccatctttg gtggttgaaa ccgtaacctc ttctaactct gtcacagaag
     5041 gcgtggtaga aagtactttg tttctataaa ccgtatagta accgttagaa ttacccgcag
     5101 cggtttgcaa gttattggca cttaatgccg ataatacagc cgcccctgat aggttattgc
     5161 tcgccatttt atccggatca agccagatgc gtaagccaaa aacagagcca tacacatcaa
     5221 cgctagaaac accatttacc gtaaagaact gtggttttac tacacggtta atataatcgg
     5281 taacttgtga tgtattaagt tcatcagaga caaatcggat atacattaac gcatcatttg
     5341 aaccggttga gactctaatt gacggatcat caataccgct cggtaaattt gagcgtaccg
     5401 cattcacttt tgccgaaata tcggaaagtg cggcattcgg atcggtattt aacttcattt
     5461 ttgccgttac cgtagtggta cttggagagc ttgatgaagt catatagtca atattatccg
     5521 cttgagcaac agcctcttct aactgtgagg taaccagtgt ctgcattaaa cgtgcatctg
     5581 cacctgaata gttaacactc acggttacaa tcgagaccgt catctccgga tattcacgca
     5641 cctgcaattt ttcgattgct tgcaagccta ggatcgtaat caataggctg atacaaactg
     5701 ccaaaacagg acgtttaata aagatgtcag taaatttcac ttaactcact ccactacagt
     5761 ttactgtttt tcgccggtgt ggtaatgcct acggcttctg tatcagaaac tttaaccaac
     5821 gcattattac ttaaacgttg taaaccgcct gttacaatca gatcacctgc tttcacgcct
     5881 ttggataatt gtgaatagtt tcctttgcgg tcagccgttt tcacttccat ctgttttgca
     5941 cggtacattt tgtttacatc taaacttggg ttttgtaccg ccattttgtt caccatttct
     6001 ttatcttcat cagataatgg ttgcagcaca tataccgttt caccatacat agtgtaagcg
     6061 atagaaattt gtggtacgac gatttgtccg gtttctgttg gtaaagcaac atttaagcgg
     6121 gcaaacatac ctgaaagcaa tttttcctgc ccttcttcaa tcaccgcttc cacattaatt
     6181 aagccggtta aacgatccac agccggatca atagccacaa ttttagctgg gaaggtttgt
     6241 gccggtaacg catcaattac ggctgtcact ttttgcccaa tcgagatttg ctctaaatta
     6301 gtttgcggca aggtaaaacg tactttcatt gaagattgat cttccacacg cacaatttcc
     6361 gtacccattg taatgtattg cccaacattc acattcacga tacccgctaa accactaaac
     6421 ggagcataaa tttgacggcg tttaatcgta gcacgcaatg cctcgatatt ggctaataat
     6481 tggttgtagg tagattgagc attatcaaac tcggctttag aagcactgtt tgaggcaatc
     6541 agattacggt aacgctctaa atttgctttg gcattcggta attgcgcttc agaggctctc
     6601 aagttagcaa tttcaacact gctgtcaaat tctactaaca gatcaccttt tttcacacgc
     6661 tgtcctgaag tgaccaaaac acggctaacc acgcctgaag tttcagcact taacattgcc
     6721 ccttgatttg ggcgaatata accgaccgca gaaatggttg gtgtccattc ttgggtcgtc
     6781 acttgcatag cagtaacttc gctcaccgcc tccggcatat ttgccgctgc ttcggctttt
     6841 ttcattgccc cgattttttg taaccctacg attgcagcaa acacaatcaa tacgattaac
     6901 aatgtgagta caattaaaaa ctttctgcct ttacccagct tctgtgtttc cgttgtcata
     6961 cattctccat aaaactaata aaaagaaact taaaaagtga ttgctttcca agtgcgtaaa
     7021 ataatctcgt ctaaatatcc atcaaactga ttttcttgat tcagattttg cagatattgg
     7081 atatccacca atgtgccgat gcttaatcca taaagcaact cattagatag atcagcaata
     7141 atcctttgct ttttcccttc taaaattaat ttattccaaa aggaagtttc atcagctatg
     7201 gtttcccgaa tcaattcatc aatccctatc accgcttgaa actgttttac caaatctaaa
     7261 cgctcgatta aaaactgcca ttttttattg accaacgctt tatattgctc aaataacgcc
     7321 atttcaggct taaactcaaa atgcatataa ccgttataac attcgagtaa ttgggcagcc
     7381 aatgagtgca ataaatcatc tttggtttta aagtaaagat ataatgtacc ggaagcgatc
     7441 cctgcttctt ttgcaatact acgcattgaa aggttttgca aaccttcttg cacaatcagc
     7501 gactcggttg ccgataaaat acggtttacc atctcttctt ttggctcgct tcgcctagac
     7561 attttatctc cttacctata atgaacagcc gttcattata gcttttttta tgaaaaaaga
     7621 aagcagaaaa cacctatcaa attaaaataa aatagttgca aaattcctca tttattgaac
     7681 aagcggtcat ttttggctaa aactttgcaa aaatcactca aacaataacg cttaacgcta
     7741 ctttattatt atttttgtgc tactatttgt acctaattat aggatcatct ttatttcaat
     7801 atggcaacga aatctaaata ccacaccaaa caatttgagc agctattggc tgacctcatc
     7861 gccaccatag aaaagcataa agcaccggtg gatttatcgt taatggcatt aggcaatatg
     7921 ataactaaca ttttaattga aaatattcaa agcccggcac aaagagaagc tctcgctgat
     7981 gcctttgccg atgcattaaa acaatcacta aaaaccaaat aagatgatgt ttgcacgcct
     8041 acgcagttta ttgccgacca attctcgcca atatcgagaa gaaacctcac agaaaatcac
     8101 gtgggggcat tggtttgcac tatttaatat tgtgttggca ctactcattt cctctcgtta
     8161 cgcatttaat gcagactggc cgaacacgct tgtaggcaaa ctttatttct ttgtcagcct
     8221 gttcgggcat ttcagctttg tggtctttgc aggatttcta ttaattctgt ttccgctcag
     8281 ttttattgtt aagaatcatc gcacctatcg tgggctttcc gtgattttag ccaccatcgg
     8341 gcaaaccgtg ttattggtgg atactgaagt cttcaagcaa ttttatctgc atttatcacc
     8401 gcttgtatgg gatctgttag ttaatccgga agaaggggaa ctgacccgta aatggcaact
     8461 gctgtttgta ccaatgccac tccttttgct ggcagaaatg ctctactctc gctggtgctg
     8521 gcagaaactg cgtagtttta gccgccaaaa atggggcaaa tatgtcgctc tctttttcgt
     8581 gatcagcttt accgctactc atttaatcta tgcgtgggca gatatgaatg cctaccgccc
     8641 gattaccgct caacgagcaa actacccact ttcttacccg atgacggctc gtaatttctt
     8701 agaaaaacac ggttttattg accgagtaga atttaatcaa gaaattgaag aaagtggcag
     8761 actagatact ttctatctga attatccaaa atctcccttg attgcgacca aaacgccctc
     8821 aactaatatt ttactgatta atttatcagg tttatctaaa cagataataa atgccgaaac
     8881 aatgcctaag ctgacagaaa tcagccaaca aagccaccgc tttatgcagc attacagtag
     8941 tggtgattca gcctctgccg gtgcattagg tctattttac agtttaagcg gtaaatattt
     9001 ggattccgtt ttagccgata aaaccgtgtc accgcttatc gaaatcgcta gaaaatcgga
     9061 ctatcaatta gggctgtttt cacataatgg ttttgccgac ccgatttatc atcaggcgat
     9121 cttctctggt attttattgc ctacggcgca cagtaatgta ggggcgattg ggcaatggaa
     9181 aaactggatc agctctcgct cattggaaaa tccgttcttt agctatttag acttaagaat
     9241 gcccttcgcc cacaccgctc aagagcaggc aaaattatta gattggcaat tcgctgaaat
     9301 ctggcaacat ttgacccaaa atgcactatt ggcgaatacg ctggtaatca ttaccgccga
     9361 tattagtaat gaagttggag cagaaaatag cttcgataaa caacacattc aagtgccgat
     9421 gatgttctac tggcaaggcg aaagcaaaga gtaccatttc ctttcaagcc atttagatat
     9481 tatgccaacc ttactgagcc aattcttcgg cgtgcaaaat ccgctgaatg attatgcaca
     9541 aggtatggat ttaagcaccc agaaccaacg tttatgggta tccagttcta atcacaaatg
     9601 gaatgtggcg attatgccga atggcgatca atatcaaatt gatcgtaaag gcaactttaa
     9661 gcactttaac agcaatggcg aacacgagaa agatgctcga ccaccattag cgttgttctt
     9721 acaaatgatt caacaaagca atcaatttat tgaaaagtaa tgttcaacaa gcggtcattt
     9781 ttgcaggaaa atttgcaaaa tttcagcaaa atatgaccgc ttgtcactat ctgagctgtc
     9841 tatatttcaa gctaacaaat acaaaccaaa ccattgctac aaaagcaata ctcccaccgg
     9901 caaatccgat attggctaat cccagttgct gaatagcgat gctccccagt aatgctccac
     9961 cgccaatgcc taaattataa gtgccggaaa aaattgcagt tgcgacatca gtcgcatcag
    10021 gggcaagttc aagcaccttc atttgcaacg caatgctcat tccggtaatg ccaattcccc
    10081 agacaaaagc gaccataaac attgccactg ttgagtcact caaaaacagt aaacaaagct
    10141 ggctgcacat aataatggcg atcccgctta agataaattt attcggggct ttgccatata
    10201 accgaccaaa taaaaaactt gccaccacac ctgccaagcc aaaaaccagc aaaataaagg
    10261 tggtgttttc cacactcacc gaactgattt taatcataaa cggctcaata tagctgtaag
    10321 cggtaaaatg tcctgaaacg atcaatgcca ccagcaaata aatgccgatt aacatcgggc
    10381 gtttaaataa caaaggcaaa ctttttatcg agcctgcatt tttgcttggt aaataaggca
    10441 gcaaccgcca aatcatcatt agcacaatca aagcgataat cccaataatg ccaaaggttg
    10501 cccgccagcc taaggcttgc ccgatcattc gcccataaat aacatcagca acagccgttt
    10561 tctttccata ttcgccgtga gtaacatcaa cggtaacgat aataaaaata ccacccacgc
    10621 ataaaccgtc atcataatgc ctgccgatga aggctccatt tggaaactgc ttgcaatgtc
    10681 tgaaagcaat gcaataggaa taaattcggt ggtgtttact ataaaagccg caaaggcaag
    10741 actaaatact ctaaggaacg ataatctccg ttgagctttt cgagcaagtt tcatattaat
    10801 taaatccgag aaaaacacat ttattttcaa aattttaaaa ataaatgtaa aaacaaaatc
    10861 aaatttccaa atttctgaaa ataaaaagat tgccaatgtt tccatcaaca atctttttat
    10921 acatatttag attaaagtgc taagttttat ttagcaaagc cttttaaacc aacaacgtga
    10981 acatactctt ggttattggt gattttacgc accaatttat aagttgtgcc tcgttcaggg
    11041 ctaatatttt caggggctgc aattaataac tgcatatcca aacgttcgca gagttcaaat
    11101 agcgtattaa ttgaggtagc atctaatcga gccgcttcat ctaagaacaa taagcgagcc
    11161 ggtagaatat ctttggcacg catacggcga gcttcttctt cccagctttg aactaccatt
    11221 aagagaatcg acatacctgt accgatcgcc tcaccggtcg ataatgcact actttctgca
    11281 cgcatccagc cgtctgcacc acggaaggtt tccacttcta aatctaagta gttacggtaa
    11341 tccaataact cttcaccaat ggtctgtggt gtacgttgcc ccatctcaat atgagggttc
    11401 acccgtttat acaacatcgc taaggcttcg gagaagctca gtttttggct gtcgaataaa
    11461 tctttgtgtt cctcacgatt attggataac gcattgagta aaatagcgtg cgtatctcgg
    11521 atattcacca ccaaacgcac cccttttacc tgaccgaatg caatattttg taaaccttgg
    11581 ttcagttgca aaatgcgttg ttgttcacgc tgaatggttt tacgtaaaat atttgccaca
    11641 ctttccgcac tgatcgccag ttttttctca cgaccggtta attcattggt taagcgtgaa
    11701 agctcgattt ccatctgctc aatcgcatca atcggatcat cggttttgat aatgtcttgg
    11761 cgaatccgct cacgcaaatg ctgataaacc gcaataaaga acgccacttt gttttccggc
    11821 ttgcgactat cttcagaagc ccgcaagcta tcacgcaggt attcattatc cgccacggcg
    11881 gtgcgtaatg ccccgagagc tttatccgaa atcgaacgta attcttcagc cgattgataa
    11941 gccaattcac ggcgatttaa acgtttttcc acatcgctgt tacgagataa acgttgcaca
    12001 atacaccagc tggcttttgc ctgcaccacc aattcacgtt gtgtatgata atcacgttcg
    12061 gctttacgta aggtgcggtt aaggttatcc atttccgcct cgatcaccgc aatttgttta
    12121 tctaaataac ctttgcggga acgttgctgg cttaaacgtt gttgcaattc atcacggcgg
    12181 aatctggctc gctcttccgc tccgctatca ccacgcacgc ccaaatcgtc aatttcacga
    12241 attaactctt gtagcatttg gtttttcgcc tcataagaac tgcgtaagcc ggtcaatact
    12301 tggttatatt gtgaaagttg agcttgagct tgacgcagct gatcacgagc ctgttcacgc
    12361 tcacgttgtg cattttccaa acgttggcgt agctgttcgg ttaatgcaga gccttctgta
    12421 cccaccgttt cttgatagct aaaatggagg cggcgattca ttacatcagc caagctgaac
    12481 actttttgct gtaacacttt ttgctcggca actgaacggc ggtaatcggc ttccaactgt
    12541 tcaaataaag ccggatcact ttttaatgcg gctgcaatcg gctcaagttg gcttaatgtt
    12601 gctccaaatt ggcggataaa catttcatct tcttctgcca attctaattg ctcacgacat
    12661 tcctccgctc gtgcttccag cgtttcatcg gctaataaat tcgcaagcgg tagaatttta
    12721 ttcaacattt gcaactgggc ttttacgctt tctaattggt gacgtaattg ctgttcgtta
    12781 ccggctgatt gtgccaattc acgttcaatt tctgcccgtt ctgccgcaat ctcttgcatt
    12841 aacatttcag ggttttcttg gaacgctaaa tttaagtgcg tgccgataaa ttggcttaag
    12901 tgttgatgta aacgctggca tttctgcaca tcaaaggcac gttcagcgtg tttttctgcg
    12961 gtttcatcac gctctgcttt taaagtcgct aaatgttttt cacgagcagc acgtccgaat
    13021 aacggcactt cagggaattt agaataacgc cattggcgat cggagacttt caccaccacg
    13081 ccttcgccta attcctcggc actaaatacc gcatcgtcaa aggcggacgg atcaccttca
    13141 attaaataaa gatcacttgg gcaatcgtct aatttctcta gctgtgtttt aaccgcctct
    13201 aaatcacgca ctacaatagc gtggcgagcc tcgccgtata aggcggagaa ataaggcgca
    13261 tcttcaattg atacatcatc atataactca gagagtaaca ctccaccaaa acgttctgcc
    13321 aactggttta agcgggcgtc ttccgagccg tccggctggc ttaagcgatt aatttgctca
    13381 tcaagcattt gttctttacg agccaattca tcacgagcaa gggtggcttc acgctctttg
    13441 ctcagcatat tttgcataaa ctgcatcact gattggctgg cttcaaactt ctcgccacat
    13501 tgctcttcta aacgagtcag agccgattgt gccgtatgcc aagccggtgc attcttcgct
    13561 aattgctgat attgttgatt aagctgttca cgttgttggc gttgggttga acgttgttct
    13621 acaaagtccg aaagctctgc ctctaaatct tctaggcgag cttgctgctc ttcaaaatag
    13681 gcgtctaatt cttccgctga attgagttgt tgttgcgatt tttggttaaa ttccgccact
    13741 aaacgctggg cattttgctg ttgttgcaaa cgctgttcta aatcgttgag tttttgacgt
    13801 aaactcaccg cttgctgagc ttgcattttt tgctcaggga aggcagaaag taacgcacga
    13861 gcctcttccc acgcttgcaa gcggtcaatt tcaccggaaa ttttgcaaac caattcaaac
    13921 gctttttcaa attgggtttt cgccatatcc gacacgctta aacgttgttc cagctcaaat
    13981 acttgatcgg taagatcttc ggcttgagcc acaaattctg cgtggtaatc ttcaatatta
    14041 tttaaatcta aattcactaa gccggttagc tgtttggctt tttctaacgc attcaccgct
    14101 tgttggtatt gcaatgcacg agtttgctgt gcatctaagg cttgttggta atccgccatt
    14161 tgagaacgca attcttcaac gtgatcatct gcctcatccg cacgagcctg agcattttcg
    14221 gcaatttccg caatttcttc caatgcctct tgctgttctt ccagcttaat attcagctct
    14281 tcaacttcgt cttggtagcg ttcgattttc tcttggtggc gtaacgcatt catcactaaa
    14341 tttagatgat cgttcgcact attgtaatcc gcctctaacg ccagctctgc ttcggcaata
    14401 tccgcacttt cacggctaaa ttccacaaag cgttgctgtt cgagcaaaat tttggatttt
    14461 gccgcatacc actctttgcg ttgctctaag gcttgttgta cattgccacg gcgttcattc
    14521 gcattacgca tataatccgc cgacacataa ttggtcgatt cggtaattaa gcgtttgaac
    14581 atatcccgat ccgattgcgt gaccttaatc gcctctaagg tcatacggtt ttcacgcaga
    14641 gcggattcca tatcttggaa cgcttggcga acgcccgtat tttccggcaa caagtaatca
    14701 cgcaaggatt tggtaatcac acttgaaata ccaccataaa gcgaggcttc gattaatttg
    14761 tagaatttgc tacggtcggc tgccgaacga aggcgttttg ggattacgcc caaatcgaac
    14821 ataaaactgt ggtaatcagt aatcgaatgg tactgtttga attggacttc gctgttctca
    14881 aattgatctt tgagttcatt taacgccagc actcgagcct tattccccac ttgttcggtc
    14941 agtaggctga taatgctttg ctcttgagga atattctgga gcgagaacga acgaatatcg
    15001 acttttttat cccgtccgac aatttgttgc aaacgcacgc cggtaataat ccgttgccca
    15061 cgggaattga atgactctaa caccgcatag caaacacccg cttttaactt accgtataag
    15121 cctttatcac gagaaccggc ggttgagcct gcttcagtcg tattacggaa attaagcaag
    15181 gttaaatctg ggatcaaggc ggtcacaaac cctgccattg tggtggactt acctgccccg
    15241 ttaccgcctg aaagcgtggt cactaagtca tctaaatcaa aggttcgagc aaaaaaaccg
    15301 ttccagttaa tcagcgttaa agagagaaat ttaccgcgtt gtacatcatt cgggcgtgca
    15361 agcggtgcaa tttgaggatt attttgcaat tctgtggtat caatcattat gttttctcac
    15421 taattgtcct agcacgctaa agcgtactag gttaggtata ggtgagtagc tccgctactc
    15481 taatcgcaac ctcagccttg gagggctgct ttatgcttaa cctagttcgg ctttaccgtg
    15541 tctagggcag actcattaaa tgctgaatct attcgaatga aatcactcat tttctccgtc
    15601 aaagggggct tcatctgcaa tattttcatc tatttcaacc gcttgttcgt ttaacaacgc
    15661 aggggttgtc gcttcaccat cacgaattaa gcgaagctgt gcctctcttg ggtcatcacc
    15721 ggtacgcaca tcagccccaa aacggaagac cgattctgaa atcacaaatt ttttgctgtt
    15781 ttgctcgcct actcgggtaa taatgccgat acgggctaat ctgcgtaacg ctccgccggc
    15841 tttttctgcc agcttggcac ggtctaaatc ggaaccggtc gaacgtgggt ttaccgcttt
    15901 taataatttg ctttcatcgg caagactgag taattcttca tacacatcat cttggctgaa
    15961 aatcccctgc tgagccaaac gttccggact taaatagagg tagcacaaca ccttacccac
    16021 taacatttcc atttctgaca ttgccgaacg ggcaattagt gtcgaggctt tcgggcgtag
    16081 gtagaaaaag ccttccggtg ctcgaatcaa ctcaacgtga taacggcggt aaaaactctc
    16141 tagttccgct tgaaaatcca tcaaaaagac gtgttggtca agctgctcgg tattgatatg
    16201 gcgaccggct cgtaattggc tgtctagctc cggaaaaatc gggttggcaa tcgcaagtgc
    16261 cagtttcggg gaaatgaaat cttggatatt ctctgtcatt gtcattctct tcaattttgc
    16321 aaaattctgg gtaaaaacga ccgcttgtta tttattgtat tggtcgataa cattcgcctg
    16381 cacttccgcc ccttgctcgt taatcggctg ccattgtggg taaacggctt ggctatcttg
    16441 gcttgccata cctaacttaa cagcttgatc gacaataata cgagccacgt caaaatggcg
    16501 ggattccggg aatcgggcaa gctgttcacg caagataacg cctaaatcta tcggtttacc
    16561 ttcagcacgg aacggcgcta aatgagcttg cattgccgaa acaatttgct cttgcacatc
    16621 tgaaagcgac tcatactcta actcacttgg caactcgccc accgattctg cctcatttaa
    16681 cattgcttca tcatcacgca agtccagtaa cgaatcggct tttgcagtat aaagcaacca
    16741 agggctgttg taataatctt gaatcgattg gcgtaaccgt tgcccgaata cacggttttt
    16801 gtccatatca atcgctgtac gaataaattt atgcacatgg cggtcatagc cgatccaaag
    16861 atcgatagct tgttgtcccc agctgataat acggtctaac ttattttgta gattcacaat
    16921 cagctgatcg ataaaatcca aatcattacg agccatcagg caactttgaa tccgcaataa
    16981 ttgagcttgc agtttatcac cagcggcatt taaggtatct tgcaactcac gcaaattccc
    17041 cgaggtttcg tctaacaatt gctcacaact cataattgct tcgtgccagt tttggctaag
    17101 cagttcggct attcgttcac ggatttggtg ctgattttcg tccataatcc gttgtgaaag
    17161 atcgatgctg tcaaagattt ccgccaccga atatttcaat ggggcaaaca cattatttcg
    17221 ccaaaaacgt tcatcttgtg cctgctctat tccctcttcc gctgctactg aagctcgctg
    17281 aatttcatct gccacaatcg aaagttgaat cgataaacgc agggtagaaa attcccgctg
    17341 gcgaacgtaa taatttgaaa ttcccacccc taacggcgta acacgataaa tcgccaaacc
    17401 ttccgtaaat tcgctactaa aacggtttaa caaccgttgt ctgactaaat cattaatcgc
    17461 attattggca cgctgggtaa aagtggcatc agattgctca aacgaatttg aaacataacg
    17521 gaaaagatca ataagatcac tttctaacaa ttcaccatct gtctgttctt ggttataaat
    17581 agagatagca agtagaaacg ctaagcggtc ggaagaaagc gaaagtgaaa attcacgatc
    17641 tttcgtccaa gagatgagtt ctggaatagt ctgtgccaat tcgttctgca tacgggctta
    17701 atctttaatt tctatacaaa aatggtattt attgtaactg aatgtaatca aaatgggaat
    17761 ggataaaacg cagacaagag aaatgaacaa tataagcggt caaatatggg tgattttttg
    17821 caaaaagtat tttaaaggta aatgaatccg aaaatttatt atcactacgc taatttatga
    17881 taccataaat agaaaagact ggatccaata gaatatcaga cacagcccct tagatcatag
    17941 tctaaactct aaggcttaga gtgatttagc taactcttta ataaatgctt taaattcttt
    18001 tccgcatttg tcatgattta aactatattc tacaaatgct ttcatatagc cgactttata
    18061 accacaatca aatgagcgcc ctgtcatatg aaaagcttca accgtttctt ggtgaatcaa
    18121 catatcaatt gcatccgtca gctggatttc atcacctacg cctactggcg ttttttctaa
    18181 taaattccaa atatttgagg aaaatacata acgtcctact accgctaaat tagaaggcgc
    18241 ctcttcaata cttggttttt caaccatttt cgcaataggc gctgcccccc cgagagggat
    18301 atctacacca tggcagtcag caaccccata gctacttaca ttttccattg gaaccggcgc
    18361 aaccataatt tggctatatc cggtttcttg gaaacgcttc accatcgcag ctaaattttc
    18421 cgttttttgg tttgctgtaa attcaccaag taatacatct ggtaatacaa ccgcaaacgg
    18481 ttcatcgcca accactgttc gtccacatag aaccgcatga cctaaacctt tggcttgccc
    18541 ttggcgaacg tgaattaagg taacatcttt tggtacaata gaacgtacat catctaataa
    18601 ttgacgtttt actcgtttct ccagcatcgt ttccaattca aaagaggtat caaaatggtt
    18661 ttcgatagca ttctttgaag agtgagtaac caatacaatt tctttaaaac ctgcagccac
    18721 acattcattt acaatgtatt gaataagagg tttatctgca aggataagca tttcttttgg
    18781 aatagctttg gttgcgggta acatgcgcgt tcccaatcca gcaacaggaa taatgacttt
    18841 catttggaat cctttgatga cttaacatat tagatataac tgaaataaac cgcttagaca
    18901 taacaggcgg tcaattttca gaaaattttg cattgcctgc ttcgctgtta tcatctagca
    18961 gctttacagt taaaatgctt attccgcatt ttcctcttct actgaggctt ttattctttc
    19021 ataaatctct cggcggtgta cagagatttc ttttggtgca ttcacaccta atttaacttg
    19081 atttcctcgg atgctgagta ccgtaatctc aacatcatct cctacgagta aaacttcccc
    19141 aatcttacga gttagaataa gcataattgt ctcctaaaaa gtgaaaaact ctataaatac
    19201 ttaaatatag agtaaagttt taaaggcgag ttcagctcgc cttgttatta tttttaaagt
    19261 tttgctgtaa tccattcttg agcaagtgac aatgcttgca ataaatgttg tggttctgag
    19321 cctccggcca ttgccatatc aggacgtccg ccccctttac ctcccacttt ttcagccatt
    19381 gcaccaacta attgaccagc attgacttta tcggttaaat ctttggtcac acctacaatc
    19441 aaattgactt tatcttccgc cgtagtcgca aatacaacaa ctgcactgcc taattgattt
    19501 tttaggtcat caaccatcgt tctcaatgct tttggttcaa cattctctaa ttgttgaatc
    19561 actacattca cgccattgat ttgggtagct tgtttggcta aatctgaacc tgcttgtgct
    19621 gcaagtttat cttttagctg ttgaagctct ttttctgtac gtttagcctt ctcttgtaat
    19681 tgaacaattt tctcaacgaa tgaatgactg tctgctttta acaattcagc actttgttga
    19741 acggcttgtt gtaaggtatg caaccaagca atcgcatttt caccagtgac agcctctata
    19801 cggcgtacac ctgctgctac cgcaccttca gaggtaattt tgaataagcc aatatcaccg
    19861 gtttgtttaa cgtgtgtgcc gccacaaagt tcaatcgaga aatctgacat ttccactaca
    19921 cgcactactt cgccatattt ttcaccaaat aacgccattg cacctttcgc ttttgcagat
    19981 tcaatatcca tttcttcaat gattacctga atattttcac gcactttagc attcacgata
    20041 cgttcaactt cttcaagttg tgatttagta attgcttccg gctgagaaat atcaaaacgt
    20101 aaaatatttt ctgacactaa tgagcctttt tgagcaacgt ggtcgcctag cacttggcgt
    20161 aacgcagaat gcagtaagtg ggtagcactg tggtttaatg taatagcatg acgacgctct
    20221 ctatctacga tcgtattaac tttgtcgcca acagaaagtg agccggaagt taattgccca
    20281 atatgcccga atacttgacc atatttttgc gtatctacta cctcaaaatt gcaaatttct
    20341 gcggaaattt gaccgctatc tcccacttgt ccgcccattt ctgcatagaa tggggtttta
    20401 tctaaaatca ctaccgcatt ttcacccgat tgaatagact caaccgattt tccattacta
    20461 aataacccaa ttacagtagc atcatttaag ctggtttcag tatatccact aaagcatgtt
    20521 ttactgtcca ctttaatcac attgttataa tctgtgccaa agctactgct ggctttcgca
    20581 cgctcacgtt gtgcggtcat ttctgcattg aagccgtctt cgtcaatttt aatatcacgt
    20641 tcacggcaaa catctgcggt taaatctaac gggaagccat aagtatcata aagtttgaac
    20701 gcaacttcgc cagataaggt gttattttca accttcgcta atgcttcttc taataaattc
    20761 aatccacgct caagagtacg ggcaaattgc tcttcttctg ctttgagtgt cttttgaata
    20821 tgcgcttgtt tttgggtcag cacctcacca gcttgcccca ttaccgttgc aagtgttggc
    20881 accaatttat agaaaaaggc ttcttttgca cccaaaatat taccgtgacg aaccgcccgg
    20941 cggataatac ggcgtaatac atagcctctt ccttcatttg aaggtaaaac accatcggca
    21001 atcagatagg aacaagcacg aatatggtct gccactacac gtaaagattt attatctaaa
    21061 tctttcacat taagcaaagt agcgacttct ttaattaaag tttggaaaat atccgtttcg
    21121 tagttggagt ttacgtgttg cattaccgca gtcatacgtt ctaaccccat ccctgtatct
    21181 acagaaggct taggcagttt ttccatcgta ccgtctgcta aacgattgaa ctgcataaat
    21241 acaatattcc atacctcaat atagcggtcg ccatcttctt ctgggctacc cggtaagcca
    21301 ccccaatgtt caggcccgtg atcatagaaa atctcggtac aagggccaca agggccggta
    21361 tcgcccatcg cccagaagtt atctgaagca taaggtgcgc ctttattatc gccaatgcga
    21421 ataatatgtt ccgatggtac acctacttct ttatgccaaa tatcgtaggc ttcatcatca
    21481 gtttcataca cagttacata taatttttct tttggtaagc caagccattg tggagaagtt
    21541 aaaaactccc aaccgaattt gattgcatct tgcttgaagt aatcaccaaa gctgaaattc
    21601 cccatcattt caaaaaaagt atgatggcga gcggtataac ctacgttttc taaatcattg
    21661 tgtttaccac ctgcacgtac acaacgttgt gccgtagtcg ctctgctata agggcgtttt
    21721 tctaacccaa gaaaaacatc tttgaattgg ttcatgcccg cattggtaaa taataatgtc
    21781 ggatcattct cgggaacaag agagctgctt ggaacaatcg tatgtccttt agtttggaaa
    21841 aactctagaa aagattgtct gatatctgaa gttgttttca ttaaaaatca ctctttttgt
    21901 aaatagaagt taaacattta gttatcttgc tattttacac attttttatg ctattggggg
    21961 agctatatgc tacttatttt ttcaattaaa taatttttgt a
//
LOCUS       DANLXO010000033        21718 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.033, whole genome shotgun sequence.
ACCESSION   DANLXO010000033 DANLXO010000000
VERSION     DANLXO010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21718
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.033"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..110
                     /locus_tag="PXD69_001069"
     CDS             <1..110
                     /locus_tag="PXD69_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CMP-N-acetylneuraminate-beta-galactosamide-
                     alpha-2, 3-sialyltransferase"
                     /protein_id="HDL6283279.1"
                     /translation="HIEVVALRVNVDNPAYIESYELLEKLGVQIVDIRE"
     gene            112..897
                     /locus_tag="PXD69_001070"
     CDS             112..897
                     /locus_tag="PXD69_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDL6283280.1"
                     /translation="MKKYLISLEKDVKRRELFFSQPNTEDFEVFSAINTMSSDWEALN
                     NHFDLALFEQRYGRKTTKGEVGCTLSHLAVYQKIAEDSTIAEDDYCLVCEDDALFADD
                     FQKHLDALLAQNLKVDIILVGQSKIPTFNDSELELNYPSTFGFLQKNIPNSQYKYAYS
                     YLNYFAGTVAYLIKKSTACQFLAQCAGKNPYWLADDFILFEKNFKFDVLIVRPLMAIE
                     NPVLISNLEDLRGSLNNNLFKKAVKYPLKKLLAIKRNFTQRNS"
     gene            908..2095
                     /locus_tag="PXD69_001071"
     CDS             908..2095
                     /locus_tag="PXD69_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283281.1"
                     /translation="MSALINLFYLYDPWFFHFLRMSFVVGLVACGYLVFQIIKGKSNG
                     IIIPKDSLIAIIALIGFSIIPLLINSTKEIGVLAMYVKMLILFVFGIAIYNVFYHNQQ
                     GKTLFVRDLKIGIAIQWICGVTALLGLPFMVDFLLSSNAMMPRFFGSEQEYRLYNITS
                     SAFFQLSIFYLMLLHFLLAYNKKTDVVNEWFLFLLLCVGLISGRTFLLMSVISIALYF
                     KWKYILPLIAFTALILFLAIVFPENRYVEHALEPVINLLSGTGKVSSSTDNLVKNHLF
                     LPTLNQFISGDGLYYTETGGYYGGSDSGYIRQVLYGGVSYMLACFAFTYYFVRKVAVN
                     WFEGSWIFTLSTIGILAILNIKADTFAFPGLMMLFLMFLSLFGTSGRNVTFFCKNKEA
                     EYV"
     gene            2088..3053
                     /locus_tag="PXD69_001072"
     CDS             2088..3053
                     /locus_tag="PXD69_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL6283282.1"
                     /translation="MFSIIVPSYNRNQEINALLESLKQQTAYNFEVIIVDDCSKIPVS
                     ETLGILNEFNDISTKEKVRELLTRDSLSHIYSYPFDVKVVRNNPNVGAAQSRNVGATN
                     ATQEWLLFLDDDDRFMPEKCERLAAEIANNPTANFVYHPAKCEMVNEGFTYVTKPFKH
                     KSELTKENILKANKIGGMPMIGLKKSLFCKIGGLSDRLRSLEDYDFLLKLLEEPSFEP
                     LYVDEALTYCTFHTKRSSVSTDTTNTEKAIEYIQQTYIKTPEANNFKLNSLYILSYPH
                     VMNLSRKAAGYYFEMFKQTKNIKQLIIALVIFISPKLAINLKRFM"
     gene            3053..3853
                     /locus_tag="PXD69_001073"
     CDS             3053..3853
                     /locus_tag="PXD69_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6283283.1"
                     /translation="MKFSVLMSLYIKEQPQYLRECFESLKVQTVQADEIVVCFDGAVT
                     PELEAIVEEYSAILPINAVKFPQNRGLGKTLNDGLTYCKNEWVFRMDTDDICMPERFE
                     KQVAFIEQNPETVIFGGQIAEFGQDIHDLVAYRNVPTTVEEIVRFTRLRCPFNHMTVA
                     YQKSKVLEVGGYQDLQEDYYLWIKLIAQFKQVANLPDLLVYARVGNGMVGRRRGMAQA
                     EAEWRLYKLKNRCQIHDPISGFGIFIMRAIPRLLPVSALKKVYGLLRK"
     gene            complement(3890..4396)
                     /gene="msrA"
                     /locus_tag="PXD69_001074"
     CDS             complement(3890..4396)
                     /gene="msrA"
                     /locus_tag="PXD69_001074"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL6283284.1"
                     /translation="MQNIREIYLAGGCFWGVESFMQRIKGVIKAQSGYANGNTDNPSY
                     QEVCAGSGHAEVVKVTYDANQISLAKLLDYFFKVIDPVSINKQGGDIGIQYRTGIYYT
                     DPQDEPVVTAALAQLQTQFDQPLAVENQMLEQYFPAEEYHQEYLVKNPNGYCHIDIQL
                     MNEILKNQ"
     gene            4577..5839
                     /locus_tag="PXD69_001075"
     CDS             4577..5839
                     /locus_tag="PXD69_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDL6283285.1"
                     /translation="MGTLNSFLGIIVLLFIAFLFSSNKRAINVRTVLGALALQVAIGA
                     LVLYVPAGRDALNAMATGVSKVISYGNEGISFLFGGLVSDKMFEVFGGGGFVFAFRVL
                     PVIIFFSALISLLYYIGVMQWVIRILGGLLQKALGTSKAESMSAAANIFVGQTEAPLV
                     VKPYISKMTESELFAIMAGGLASIAGSVMAGYAGMGVPLTYLIAASFMAAPAGLLFAK
                     IMVPQTEKFRDELEAVDLEKPANILDAAASGASSGMQLALNVGAMLIAFVALIALVNG
                     ILGGIGGWFGYDTLNLGQIFGWVFKPLAWVIGVPWEEAEIAGQMIGLKLAVNEFVGYL
                     EFAKYLAPESTVHLTDKTVAIITFALCGFANFSSIAILIGGIGAMAPSRRGDIARLGI
                     KAVIAGSLANLMSATIAGLFIGLGGAVL"
     gene            5984..6760
                     /gene="deoC"
                     /locus_tag="PXD69_001076"
     CDS             5984..6760
                     /gene="deoC"
                     /locus_tag="PXD69_001076"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDL6283286.1"
                     /translation="MNLKKSAEIALSLMDLTTLNDNDTDEKVIALCQQANTKFGTPAA
                     ICIYPRFIPIARKALKQQGIEQVKIATVTNFPHGNDDIEIAVAETKAAVAYGADEVDV
                     VFPYKALIAGNEQIGFDLVKQCKAVCAANNVLLKVIIETGELKSAELIRKASEISIQA
                     GADFIKTSTGKVAVNATLESARIMLETIRDLGVADRVGFKAAGGVKTSEEAAQYLALA
                     ESILGNDWVSASHFRFGASSLLANLLATLNDEQQQAVQGY"
     gene            6781..7500
                     /gene="deoD"
                     /locus_tag="PXD69_001077"
     CDS             6781..7500
                     /gene="deoD"
                     /locus_tag="PXD69_001077"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDL6283287.1"
                     /translation="MATPHINAPEGAFADVVIMPGDPLRAKYIAETFLEDAKEVTNVR
                     NMLGYTGTYKGRRISVMGHGMGIPSCSIYAKELITEYGVKKIIRVGSCGAVRNDVKVR
                     DIVIGVGACTDSKVNRIRFRDNDFAAIADFDMTLAAHQAAKAKGIEARFGNLFSADLF
                     YSPDVEMFDVMEKYGILGVEMEAAGIYAVAAEYGAKALAICTVSDHIRTGEQTTSEER
                     QLTFNGMIEIALESVLIGDKQ"
     gene            complement(7576..8427)
                     /locus_tag="PXD69_001078"
     CDS             complement(7576..8427)
                     /locus_tag="PXD69_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDL6283288.1"
                     /translation="MQTHRAIIESIFALAPKNELWATPISGLTVHAADRSIRFNGYIQ
                     DPSLCVVLLGERQICTNGHCQVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLD
                     FDLIAKIITQLPPQKISENINQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLILN
                     ELYFYLLQSEQGGYIRSLLSQDGNIAKIANATKILERKFADTLNMSALAEEVGMSVAG
                     FYAHFKSVTSMTPLQYQKSLRLNAAREKLQAGVSVSETAYQVGYESPSQFSREYKRQF
                     GESPKGR"
     gene            8542..8973
                     /locus_tag="PXD69_001079"
     CDS             8542..8973
                     /locus_tag="PXD69_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDL6283289.1"
                     /translation="MKIFYHTSATATGGRDGRTQVDDGSIGFDLVGFQNESGKVGTNP
                     EQLFAMGYAACFDSAMNHVAPTLGIKPTKSSTTVAVGIGQKADGAFGLDLDITITVEG
                     ISAEEAKTLISKAHEVCPYSNATRGNVDVRLHVKVVSEFDL"
     gene            8990..9670
                     /locus_tag="PXD69_001080"
     CDS             8990..9670
                     /locus_tag="PXD69_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDL6283290.1"
                     /translation="MKMLDFETTVKTRQSIRKFLPLPMTETEIKQILADAQNAPSACN
                     TQPWLVHVASGETLARLKARFKKTFEAGINDADFEFNQTKFTGDYEPRWRNQYSHVFT
                     TSYGIPREDKAGRQVVYDDNIVGYGAPHMAFLFMPSIDGHDVNIASDVGMYSQTFLLS
                     LTARGFGGIPQLALAMFAKDVREELGIPEHYKLLHAISFGHPDWDAMQNKHHLGRVPV
                     EESATLHW"
     gene            9734..10858
                     /locus_tag="PXD69_001081"
     CDS             9734..10858
                     /locus_tag="PXD69_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDL6283291.1"
                     /translation="MINLFTPYTLNNDVEIKNRLVVAPMTHSASNDDGTISEQERHFL
                     HNRAADMGLFITAATGVMRNGKAFYGQPEALDERYLASLTETANILKNQGTKAILQIF
                     HGGAQAIPALLDGANAVAPSEHANGAKALTADEVKQMIQAFANATDLAIQAGFDGVEI
                     HGANGYLIQQFFSTEFNQRTDEWGGSLEKRLRFPLAVVEAAVSVREKHQRPDFIIGYR
                     FSPEEPGEHGLTMTDTYALIDALCEKPLQYLHISLWDFGKKARRGADTNFTRMQLVHQ
                     HINGRLPLIGVGNLLTGEQIRKAYATGWAEFIALGKAVMLNPNVATLLKDNRDSEIVS
                     ELDPQQADHYGIPDRLWGYCVQGGAWLPPLKGQNGQPMDI"
     gene            10942..11559
                     /locus_tag="PXD69_001082"
     CDS             10942..11559
                     /locus_tag="PXD69_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDL6283292.1"
                     /translation="MITLHYLNSSCSHRIVWLLEALGLDYELKIYHREESGFAPMEVK
                     ALHPLGKAPVLQDGDLVLAEGNAIIQHLIARYAEGKFEPTRGSEAYSMYHYWLSISAS
                     LFSANLVTMLANRSDLGAFGDYAKAQTPLYFNHIEQTLSDKKWIVGDELTGADFSLCF
                     PLQWGRNFVEMANYPNIARYLEQVENHPAYQKANQKALKLDMNRF"
     gene            11702..12643
                     /gene="argC"
                     /locus_tag="PXD69_001083"
     CDS             11702..12643
                     /gene="argC"
                     /locus_tag="PXD69_001083"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDL6283293.1"
                     /translation="MSKYKIFVDGAVGTTGLRIHERLSQADDIELLTLPEEQRKDLNA
                     RVAKVAEADLTFLCLPDEASKELVANAPENTRICDTSTAHRVNPNWVYGFPELSGQRE
                     KIQNAKRVAVPGCHATGYIALVRPLVEKGILPADYPLSCHSLTGYSGGGKAMIADYEN
                     ENSPNAFNAPRVYGLTLQHKHLPEMQAVTQMQNPPIFTPVVADYYSGMLVTVPLQIFA
                     LQAVKSGEEIANLLADYYQTSRLIHVHPFQSLPEDGMLAANAYAGKDSLEIFIYGNST
                     QLLLAARFDNLGKGASGAAVQCMNIMLGRDEVEGLEL"
     gene            12735..13589
                     /gene="argB"
                     /locus_tag="PXD69_001084"
     CDS             12735..13589
                     /gene="argB"
                     /locus_tag="PXD69_001084"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDL6283294.1"
                     /translation="MQQQEINQFANLLEKSTACLVKWQGKIIVVKYGGNAMINEELKK
                     SVMADLLLLHRLGVKVVLVHGGGLEISQGVKLLGKEPQFINGLRVTDSDTINVVLQML
                     AGKVNKSLVALLKGKGIGLCGIDGAMLQCKKLEAEVDYGFVGDIVKVDPTVIEIALNA
                     GLIPVVSTVGVDENGQAYNINADTAASEIAIALQAEKLVSMTDIAGLLRDRFDESTLI
                     PEVEVSEVQSLIEQGIIAGGMIPKIACCTDFIRAGGSEANIIDGRIDHAILVEMFGGK
                     NGTRFYKK"
     gene            13602..14786
                     /locus_tag="PXD69_001085"
     CDS             13602..14786
                     /locus_tag="PXD69_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDL6283295.1"
                     /translation="MTSSNTIKQLDKDYIAQTYGRFDLALSHGKGCEVWDFEGNKYLD
                     FTSGIGVNSLGWADEDWLQAVTTQAGKLAHTSNLFFTEPASQLAQKLVAASGLKRAFF
                     CNSGAEANEGAIKTARKYSFDKYGSGRSTVLTLVNSFHGRTISTLASTGQEVFHKHFF
                     PFTEGFEYLPVNGIEALKARLETENVCGILLEVVQGEGGVCPLEADYLHAVQSLCQEK
                     DILFMIDEVQTGIGRTGTLFAYQQFDLTPGLVTLAKGLGGGLPIGAFLLGEKVEMTLG
                     KSDHGSTFGGNPVSCAAANVVIDKINAEFLAQVQQKGQLLQQRLASLPKVKSVSGLGL
                     MLGVEFEEGILAADIVAKCINKGVLFLTAKSKLRLLPPLMISEQQIEQGIRVLEDVLK
                     DS"
     gene            14969..15400
                     /locus_tag="PXD69_001086"
     CDS             14969..15400
                     /locus_tag="PXD69_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL6283296.1"
                     /translation="MSNQIALLLMSHGSFARAALASAELIVGQQENVAAIGVVAVDNV
                     ADIKRQMEQTIAELNTDKGLIILTDIVGGTPMNLASSQLTHPNVFACSGLNLPLLLEV
                     LMSRDGNLQEIRENLPLAYQNGFSLRTQQDFVSQEDDDDLL"
     gene            15387..15854
                     /locus_tag="PXD69_001087"
     CDS             15387..15854
                     /locus_tag="PXD69_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL6283297.1"
                     /translation="MICFSRIDDRLIHGQVVTTWVNLHRIEQIIVLNDAVAADPTQKQ
                     ILTMAAPQGIKVVAFGIEKFGEVLQKTQITRRTMLLFTNSIDVLRTVELGVSIDKFNV
                     GGMRYQARREQLSKAVSVTPEERQAFKTLLEKGVEVTVQMVPNDEKLNLQEII"
     gene            15857..16624
                     /locus_tag="PXD69_001088"
     CDS             15857..16624
                     /locus_tag="PXD69_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL6283298.1"
                     /translation="MLTALLVACWAGICALDDIGTQMIRRPLLIAPVVGLIMGDLETA
                     LIIGATLEVMWMGIGNVGAYSAPDMISGTAIGTALGIAAGEASTAVALAVPTSLLAQQ
                     LLILYRSGVCALNPIAERWAASGDFDKIFRIHYIPMLIAFSIRAIPTFLAVYYGADII
                     AQAVSALPAKVITGLNVAGKIIPAIGIGLLMLMMIKKAELWTFLIAGFTLAVYLKLSV
                     LPITLIALPLALIYDLAVSKKAEAAPTKTADEEDYDL"
     gene            16621..17427
                     /locus_tag="PXD69_001089"
     CDS             16621..17427
                     /locus_tag="PXD69_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HDL6283299.1"
                     /translation="MSNKITKQDLNKVFWRMQVLNVTNNFQSMQAIGFLSSFIPVLKR
                     LYKDRPQEERAEAMKRHLKFFNSHVNSDALILGIAAAVEETTKEDEKETVTAIKTGLM
                     GPLAGLGDSLLKFTWLPICGSIGAALALSGNVLGPILMFLLYNSVNIATKYYGIHLGY
                     SKGVDLIHGAGNNILQRLGNMANVVGLMVIGALIASVVKVKVVSQIAAGDNVIKFQEM
                     LDKVMPGLLSLLLTVVIYWILKKTNGKYAATMILATMGICIGLVYAGILG"
     gene            17427..18464
                     /locus_tag="PXD69_001090"
     CDS             17427..18464
                     /locus_tag="PXD69_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDL6283300.1"
                     /translation="MDSVYDIIRLEQGRYLFRQQPAQSVQIFFLDNPDSKDSKWLAET
                     DLAEFELKLSACEARPFFLIQSANGEQIVAERTLPVAGMNNFRDMGGYVAHQGKRVKW
                     GKLYRSDHLHNLRDEGVAYLDKLGIQTVIDYRSPNEVAKYPNPPINGREQTFRLDPNA
                     HTAELAAQFSADKHDEDRNLVNKIIAQKAEGNLINRYDIVMAQYRNFVEKAECQTAFA
                     EMLRLATDPENAPLVQHCRGGKDRTGFGAMLLLGILGVSKADIIADYMLTHYNRLARN
                     EEKMAIYRTFTQDQDVLDYLLSLIDTQPEFIEQSLNTIETQYGTIEQYAQRVLGITAK
                     EIEALRANYLA"
     gene            18554..19774
                     /gene="agp"
                     /locus_tag="PXD69_001091"
                     /pseudo
     CDS             18554..19774
                     /gene="agp"
                     /locus_tag="PXD69_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628146.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
     gene            20082..>21718
                     /locus_tag="PXD69_001092"
     CDS             20082..>21718
                     /locus_tag="PXD69_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDL6283301.1"
                     /translation="MSQDIQADLKKILALLSRNRRFQSLFLLLLRSEQFINSDALSTE
                     LQLSVRTVKKEIKLLKEKLEPYGIQIFSRPFYGYKLLIQFEELHTQLKQYFQISQPMT
                     VNNKFESRVNAILRRLLVSQRALKVEDFQSELYLSFTSALTKEFSQVKALLGKYGLIL
                     EAKPYHGMNIVGESYRKIMLTVRLYKYFTQLEHPFGIKEFEQCFACPMTEKIRERLAK
                     TIIHFNLVFSDIYAERFIIYLRYFYNQQPELLLPKLNFNYQQTNEYQFVIKLLEQLRE
                     QDSRFEFNPEVIRFLTYIAIASTDLYRFKDCNSDNYPLLLDKAWEIHRFIFTQFSAYL
                     NLSEIHDDTCRKDLLKMLIPIAMKMMLSISDDVDLGLFNQTELHRNPILAHTVEKLVD
                     DIEKNYGYSLSIREQYFIFDIFSGMVNRIELERKPLRLAIIALNGRLSTQQLKRNIKR
                     YFSDYILKIETKVLYELAIMEDKPYDYYLCNEYGKNMAIPYKPIYFADSSLNENEYAT
                     SLNEVFYHAYQYDEVLPSIKSIEIEAQYRLNEFHLEQ"
BASE COUNT         6431 a         4042 c         4748 g         6497 t
ORIGIN      
        1 accatattga agtggtagca ttaagagtga atgtagataa tcctgcttat attgagagct
       61 atgaattgct tgaaaaatta ggcgttcaga ttgttgatat tagagaataa aatgaagaaa
      121 tatttaattt cattagaaaa agatgtaaaa agacgagagc tattttttag ccagcctaat
      181 acggaagatt ttgaggtgtt cagtgccatt aatacaatga gtagtgattg ggaggcatta
      241 aataaccatt ttgatttggc tctgtttgaa cagcgatatg ggcgtaaaac cactaagggc
      301 gaagtaggtt gtactttaag ccatttagcc gtttaccaaa aaattgccga agatagcact
      361 attgcggaag atgattactg cctagtctgt gaagatgatg ccttatttgc cgatgatttc
      421 caaaaacatc ttgatgcttt attagcacaa aatttaaaag tcgatattat tttagttggg
      481 cagtcgaaaa ttccaacttt taacgatagc gaattagagc ttaattaccc atcaaccttt
      541 ggctttttgc aaaaaaatat tccgaatagc caatataaat atgcttattc ttacctgaat
      601 tattttgctg gtacggttgc atatttaatt aaaaaatcga ccgcttgtca gtttttagca
      661 caatgtgccg gaaaaaatcc atactggctt gccgatgatt ttattttatt tgaaaagaat
      721 ttcaaatttg atgtgttaat tgtccgcccg ttaatggcga tagaaaatcc tgttctaatt
      781 agtaatttgg aagatttacg tggttcatta aataataatt tatttaaaaa agccgtaaaa
      841 tatccactta aaaaattact ggcaattaaa cgtaatttta ctcagcgaaa ttcataatag
      901 gtctgaaatg tcagcactca ttaacttatt ttatctttac gatccgtggt ttttccattt
      961 tttaagaatg tcgtttgtag tcgggcttgt tgcttgtggc tatttggttt tccaaataat
     1021 caagggcaaa tcgaatggca ttattattcc taaagatagc ctgattgcaa ttattgcatt
     1081 aatcggcttt agcattattc cattattgat taacagtaca aaagaaattg gtgtgctggc
     1141 aatgtatgtc aaaatgctga ttttgtttgt gttcgggatt gcgatttata atgtttttta
     1201 tcataaccaa caaggtaaaa ctttattcgt tcgtgattta aaaatcggca ttgctattca
     1261 atggatttgt ggtgtgacag ccttattagg tttgccgttt atggtggatt ttttattatc
     1321 cagcaatgca atgatgccac gtttttttgg ttcggaacaa gaataccgtt tatataacat
     1381 cacttcttcc gcctttttcc aattaagcat tttttattta atgctattac attttttatt
     1441 ggcatataat aaaaaaacag atgtggtgaa tgagtggttt ttatttttat tattatgtgt
     1501 tggtttaatt tccggtagaa cctttttatt aatgtcagta ataagtattg cactctattt
     1561 taaatggaaa tatatattgc cactgattgc cttcactgcg ttaattctat ttttggcgat
     1621 tgtttttccg gaaaaccgtt atgttgaaca cgccttagaa ccggtaatta atttattgtc
     1681 cggcaccgga aaagtcagct cttcaaccga taatttagtg aaaaaccatc tgtttttacc
     1741 gactttaaat cagtttattt ccggtgatgg tttatattac accgaaactg gtggctatta
     1801 tggtggatcg gattccggct atattcgcca agtattatat ggtggagtaa gttatatgtt
     1861 ggcgtgtttt gccttcactt actattttgt acgcaaagtg gcggtgaatt ggtttgaagg
     1921 cagttggatt tttaccttat ccaccatcgg cattttagct attttaaata ttaaagcaga
     1981 tacctttgct ttcccggggc tgatgatgct gtttctaatg ttcttgtcgc tgtttggaac
     2041 aagcggtcga aatgtaacat ttttttgcaa aaacaaagag gctgaatatg tttagtatta
     2101 ttgtgccttc ttataaccgt aatcaagaaa tcaatgcgtt gcttgagagt ttaaagcaac
     2161 aaactgcata taattttgaa gtgatcattg ttgatgactg ctcaaaaata ccggtcagtg
     2221 aaactttagg aattttaaat gaatttaacg atatttctac taaagaaaaa gtaagagaat
     2281 tacttactag agatagttta tctcatattt atagctatcc atttgatgtg aaagtggtgc
     2341 gaaataaccc aaatgttggg gcggcacaaa gccgaaatgt aggggcaact aatgccacac
     2401 aagaatggct actgttttta gatgatgatg accgctttat gcctgaaaaa tgcgaacgtt
     2461 tagcggcaga gattgcgaac aatccaactg ccaattttgt gtaccacccg gcaaaatgtg
     2521 aaatggtaaa tgagggtttt acttatgtca ccaagccgtt taaacataaa agtgagctaa
     2581 ctaaagaaaa cattctaaaa gcgaataaaa ttggcggaat gccgatgatt ggcttgaaaa
     2641 aatcactctt ttgtaaaatt ggtggattat ctgaccgctt gcgatcactt gaagattatg
     2701 atttcttact gaaattattg gaagaaccga gttttgagcc attgtatgtg gacgaagcct
     2761 tgacctattg tactttccat accaaacgct ccagtgtttc aaccgatacc actaatacag
     2821 aaaaggctat tgagtatatt caacaaacgt atatcaaaac acctgaggcg aataatttta
     2881 agctcaattc gctttatatt ttaagttatc cacacgtaat gaatttatcc cgcaaggcag
     2941 ccggttatta ttttgagatg tttaaacaga ctaaaaatat caaacaactg attattgcgt
     3001 tggttatttt tatttcgccg aagttggcga ttaatttgaa aaggtttatg taatgaaatt
     3061 ttccgtttta atgtcgttat acattaaaga gcaaccgcaa tatttaagag aatgttttga
     3121 aagcttgaaa gtacaaactg tgcaggctga tgaaatcgtt gtttgttttg atggtgcagt
     3181 tacgcctgaa ttagaggcga ttgtagaaga atatagtgca attttgccga ttaatgcggt
     3241 gaaattccca caaaatcgag gtttaggtaa aacgctaaat gatgggctaa cctattgtaa
     3301 gaatgaatgg gttttcagaa tggatacaga cgatatttgt atgccggaac gtttcgagaa
     3361 acaagtggca tttattgaac agaatcctga aaccgtgatt tttggcggcc aaattgctga
     3421 atttgggcaa gatattcacg atcttgtcgc ttaccgcaat gtaccaacca cggtggagga
     3481 aatcgtcaga ttcactcgct tgcgttgccc gtttaaccat atgacggttg cttatcagaa
     3541 atccaaagtg ttggaagtcg gtggctatca agatctgcaa gaagattact atttatggat
     3601 caaactcatt gctcaattta aacaagtggc aaacttgccg gatttattag tgtatgcccg
     3661 agtcggtaac ggaatggttg gcagacgccg tggaatggcc caagcagagg cagaatggcg
     3721 tttatataaa ttaaaaaacc gctgccagat tcacgatccg atttcaggtt ttgggatttt
     3781 cataatgcgt gcaattcctc gtttattacc ggtttcagca ctgaaaaaag tgtacggttt
     3841 gctcagaaaa taaagctaaa aaaaccacag attgctctgt ggttttttgt tattgattct
     3901 tcaaaatctc attcattaat tgaatatcaa tatggcagta gccgttcggg ttttttacta
     3961 aatattcttg gtggtactct tcggcaggga aatattgctc taacatttgg ttttccactg
     4021 ccagcggctg atcaaattgg gtttgtaatt gtgcaagtgc ggcggttacc accggttcgt
     4081 cttgtgggtc ggtataataa ataccggtgc ggtattgaat accgatgtcg ccaccttgtt
     4141 tgttaatgct caccgggtct attactttaa agaagtaatc tagtaatttt gccaagctaa
     4201 tttgattggc atcataagtc acttttacca cttcagcgtg tccgctaccg gcacacacct
     4261 cttgatagct tgggttatcg gtattaccgt tggcatagcc tgattgtgcc ttaatgacac
     4321 ctttaatccg ttgcataaaa gattccacgc cccagaaaca gccaccggct aagtaaattt
     4381 cacgaatatt ttgcatatta cctctctata attgtaaatt tttcgataaa tttgactgct
     4441 tgtgatgaat aataaaatac cataatttag tttttgtcaa attttgtctt gaatgatgat
     4501 aatttcacaa gattttttgc ctaaaaatag gtatagtatc gtcacctttt ttaatcaatt
     4561 tataattaga ggttctatgg gtactcttaa cagcttttta ggcattattg ttttactatt
     4621 cattgcattt ttattttcga gcaataaacg tgcaataaac gtgcgtaccg tattaggcgc
     4681 attagcattg caggtagcta ttggtgcatt ggtgctttat gtgccggcag ggcgtgatgc
     4741 cttgaatgcg atggcaacag gtgtgtcaaa agtgatttct tacggtaatg aagggatttc
     4801 atttttattc ggtggcttag tcagcgacaa aatgtttgaa gtatttggcg gcggcggctt
     4861 tgtgttcgct ttccgtgtac ttccggtgat tattttcttc tctgcactca tttctttgct
     4921 ttactacatt ggagtgatgc aatgggtaat ccgtatttta ggtggtttat tacaaaaagc
     4981 attaggtaca tctaaagcgg aatctatgtc tgcggcagct aatattttcg ttggccaaac
     5041 tgaagctcca ttggtagtaa aaccttatat cagcaaaatg acagaatctg aactctttgc
     5101 gattatggca gggggcttag cttctattgc aggttctgtt atggctggtt acgcaggaat
     5161 gggcgtacca ttaacgtact taatcgcagc ctcctttatg gcggctccgg cagggttatt
     5221 attcgccaaa attatggtgc cacaaaccga aaaattccgt gatgaactag aagcggtaga
     5281 tttagaaaaa ccggcaaata ttcttgatgc agcagcttca ggtgcttctt caggtatgca
     5341 actggcatta aacgtagggg caatgttaat tgcattcgtg gcgttaattg cattagtgaa
     5401 tggtatttta ggaggtattg gcggctggtt cggttatgat accttaaact taggtcaaat
     5461 tttcggctgg gtatttaaac cgcttgcgtg ggtaatcggt gtgccttggg aagaagcaga
     5521 aattgcgggg cagatgatcg gcttaaaatt agcggtaaat gaattcgtgg gttatttaga
     5581 gtttgctaaa tacttagctc ctgagtcaac cgtacattta acggataaaa ctgttgcgat
     5641 tattaccttt gcactttgtg gctttgcgaa cttcagctcg attgcgattt taatcggtgg
     5701 tatcggggca atggctccaa gccgtcgtgg tgatattgcc cgacttggga ttaaagccgt
     5761 cattgctggc tcacttgcca acttaatgag tgcaaccatt gccggcttgt ttatcggctt
     5821 gggtggagca gttctctaat ccagtttgta taaaaccact agaaatagtg gttttatctt
     5881 tttttatctg acgtaaacgg ttgcttttgg tttgtctatt tacaagcggt cagattttta
     5941 taaaatttta ccaaccacca cgcatttaat aaaaggagac actatgaatt taaaaaaatc
     6001 cgctgagatt gctctttcgt tgatggatct caccacatta aatgacaatg atactgatga
     6061 gaaagtcatc gcattatgcc aacaagcgaa caccaagttt ggcacaccgg cagcaatttg
     6121 catttatcca cgttttatcc cgattgcccg caaagcattg aaacagcaag gtatcgagca
     6181 agtaaaaatt gcgacagtca cgaatttccc tcacggtaat gatgatattg aaattgcggt
     6241 agctgagacc aaagccgcag ttgcttatgg ggcagatgag gtagatgtgg tattccctta
     6301 taaagcatta attgcaggta atgagcaaat aggtttcgac ttggtaaaac aatgcaaagc
     6361 agtttgtgct gccaataatg tgttgcttaa agtgattatt gaaaccggcg agttaaaatc
     6421 agcagagctt attcgcaaag caagcgaaat ttcgattcaa gcaggggctg attttattaa
     6481 aacctcaacc ggcaaggtgg cagtgaatgc tacccttgaa tctgcccgca ttatgcttga
     6541 aaccattcgt gatttaggtg tggcagaccg tgttggcttt aaagctgcag gtggggtaaa
     6601 aacctcggaa gaagccgccc aatatcttgc acttgcggaa tctattttag gcaatgactg
     6661 ggtgagtgca tcacattttc gcttcggtgc atcaagttta ttagctaatt tattagcaac
     6721 attgaatgat gaacagcagc aagctgttca aggttattaa ttaataaaga ggaacataaa
     6781 atggctactc cacacattaa cgcacctgaa ggtgctttcg ctgacgttgt aattatgccg
     6841 ggcgatccgc ttcgtgctaa atatatcgct gaaacctttt tagaagatgc aaaagaagtg
     6901 accaatgttc gcaatatgtt aggctacacc ggcacttata aaggtcgccg catttcagta
     6961 atggggcacg gtatggggat tccatcttgc tcgatttacg ctaaagaatt aattactgaa
     7021 tatggcgtga agaaaattat ccgtgtcggc tcgtgcggtg cggtacgtaa tgatgtcaaa
     7081 gtgcgtgata ttgtcatcgg tgttggggct tgtaccgatt ctaaagtaaa ccgtattcgc
     7141 ttccgtgata acgattttgc ggcgattgct gattttgata tgacattagc tgctcaccaa
     7201 gcagctaaag cgaaaggcat tgaagctcgt ttcggtaatt tattctcagc cgatttattc
     7261 tactcacctg atgtcgaaat gtttgatgta atggaaaaat acggcatttt aggcgtagaa
     7321 atggaagcag caggcattta tgcggtagcg gcagagtatg gagcaaaagc attagcaatt
     7381 tgcaccgttt cagaccatat ccgcaccggt gagcaaacta cctctgaaga acgtcaatta
     7441 acctttaatg gtatgattga aattgcgtta gagtcagtat taattggcga taagcagtaa
     7501 tttctaacct gacaagcggt gaaattttgc aaaaaatttg cagaatttga ccgcttgtta
     7561 tttttgattc ttcctttatc ttcctttcgg gctttcgcca aactgccttt tatattctcg
     7621 actaaactgg cttgggcttt catagccgac ttgataggcg gtttcactca cgcttactcc
     7681 tgcttgtagt ttttcccttg ccgcatttag tcttaacgat ttctgatatt gcagtggtgt
     7741 cattgaagtt acgcttttaa aatgagcgta aaaccccgcc acgctcattc ctacctcttc
     7801 agccagtgct gacatattta gtgtatcggc aaattttctt tctaagattt ttgttgcatt
     7861 ggcaatttta gcaatattgc catcttgaga gagtagagag cgtatatagc caccttgctc
     7921 agattgtaat aaatagaaat agagttcgtt taatatcaat ggtgcaagaa aatgaatatg
     7981 atttggagaa ttaagcaaat ttagtaagcg taacaaacag tctttaattt cattctccag
     8041 ctcccattta gtgcgttgat taatgttttc acttattttc tgtgggggaa gctgcgtgat
     8101 aattttggca ataagatcaa aatccaagcg tagtgaaatc gcaagataag gctgattttc
     8161 tgcaactgat aaggtttggg taacaatcgg caaattcaca gggcaaaaca tcatttcctg
     8221 attaccgaag acttggcaat gtccattggt acagatttgc cgctcgccta ataatactac
     8281 acataaactt gggtcttgga tataaccgtt aaatctaata gaacgatcgg cagcgtgaac
     8341 ggttagccct gaaatgggag tagcccaaag ttcatttttc ggagcgaggg caaaaataga
     8401 ttcaataata gctcgatgag tttgcataat aatctcactt ttagaaaatt aggcatattt
     8461 tatagaaaat caggcaagac gacaaatagc aaaaagcgga taatatcccc aatcaaataa
     8521 agcatttaat aggagcaaaa tatgaaaatt ttttatcaca catcagcaac tgcaaccggt
     8581 ggtcgtgacg gcagaaccca agtggatgac ggttctatcg gttttgattt agtcggtttc
     8641 caaaatgaaa gtggcaaagt aggcactaat ccggaacaat tattcgcaat gggctatgct
     8701 gcctgctttg acagtgcaat gaatcacgtt gccccaacct taggcattaa gccaaccaaa
     8761 tccagtacca ctgttgcagt tgggattggt caaaaagctg atggtgcttt cggcttagat
     8821 ttagatatta ccattactgt ggaaggcatt agtgcggaag aagcgaaaac tttaattagc
     8881 aaggcacacg aagtttgccc atattcaaat gcaacccgtg gtaatgtaga tgtgcgttta
     8941 cacgttaaag tcgtgagtga atttgactta taaaaaataa ataggggaaa tgaaaatgtt
     9001 agattttgaa accacggtaa aaacacgaca atcaatccgc aagtttttac cgcttccgat
     9061 gacggaaact gaaatcaaac aaattcttgc cgatgcacaa aatgcccctt cggcttgtaa
     9121 tacacagccg tggttagtac acgttgcctc tggtgaaacg ctagcacgct taaaagctcg
     9181 ttttaaaaag acttttgaag cgggcattaa tgatgcggat tttgagttca atcaaacgaa
     9241 atttaccggt gactacgaac cacgttggcg taaccaatac agccacgttt ttaccaccag
     9301 ctatggcatt ccccgtgaag ataaagccgg tcgccaagtg gtgtatgatg acaatattgt
     9361 cggttatggt gcgccacata tggcattcct atttatgcca agcattgacg gacacgatgt
     9421 caatattgcc agcgatgttg gtatgtattc gcaaactttc ttgctctcac tcaccgctcg
     9481 tggttttggc ggcattccgc agcttgccct tgcgatgttt gctaaagatg tgcgtgaaga
     9541 gttaggcatt cctgaacatt acaagctcct ccacgccatt tctttcggac acccagattg
     9601 ggacgctatg cagaacaaac accatttagg gcgtgtgccg gtggaagaga gtgcgacctt
     9661 acattggtaa taaacaagcg gttgattttt cgcaaaaatt tgcgaaatca accgtatttt
     9721 ttaggagaat acgatgataa atttatttac cccttatact ctgaataacg atgtagaaat
     9781 taaaaaccgc cttgtagttg ccccaatgac ccattccgcc tccaacgatg acggcacaat
     9841 tagcgagcaa gaacgccatt tcttgcataa tcgtgcagca gatatgggct tatttatcac
     9901 cgcagcaacc ggggtaatgc gtaacggcaa agcgttttac ggtcagccgg aagctcttga
     9961 tgaacgctat ttggcaagcc tgacagaaac tgccaatatc ttgaaaaatc aaggcaccaa
    10021 agcgattttg caaattttcc acggtggggc acaagctatt cctgccttgc ttgacggggc
    10081 gaatgcagtt gcgccgtccg agcacgccaa cggtgctaaa gccctaacgg cggacgaagt
    10141 gaagcaaatg atccaagctt tcgctaatgc caccgattta gctattcaag ccggttttga
    10201 tggtgtggaa attcacgggg cgaacggcta tttaattcaa caatttttct ctactgaatt
    10261 taatcaacgc actgatgaat ggggcggtag ccttgaaaaa cgcttgcgtt tcccgttagc
    10321 ggtggttgag gcagcggtca gcgtgcgtga aaaacaccaa cgccctgatt ttattatcgg
    10381 ctaccgtttc tcaccggaag agccgggcga acacggctta accatgaccg atacctacgc
    10441 cctgattgat gctttgtgcg aaaagccgtt gcaatacttg cacatttcac tctgggattt
    10501 cggcaaaaaa gcccgccgtg gtgcagatac caacttcacc cgtatgcaac tggtacacca
    10561 acacatcaac gggcgtttac cgctgatcgg cgtgggtaac ttattaaccg gtgaacagat
    10621 ccgtaaagct tatgcaacag gctgggcaga atttatcgcc ttaggtaaag cggtaatgct
    10681 caacccgaac gtggcgacct tgttgaaaga taatcgagac agtgagattg tcagcgaact
    10741 cgacccgcaa caagccgacc actacggcat tcccgataga ctatggggct actgcgtgca
    10801 aggtggtgct tggttaccgc cgcttaaagg gcaaaacggg caaccaatgg atatttaatc
    10861 attacagaca agcggtcatt tttttgtaaa aatttgcaat taagtgaccg cattttttca
    10921 attatctgaa ggagaaaaat tatgattacg ttacattacc tgaacagttc ctgctctcac
    10981 cgcatcgttt ggttgttgga agccttaggc ttggattacg agctaaaaat ctaccatcgt
    11041 gaagagagcg gttttgcacc tatggaggta aaagccttgc acccacttgg caaagcccct
    11101 gtgttgcaag atggcgattt ggtgcttgcc gaaggcaatg cgattatcca gcatctgatt
    11161 gcccgttacg ccgaagggaa atttgagccg actcgtggta gcgaagccta ttcaatgtat
    11221 cactactggt tgtcgatttc tgcttcatta ttctcggcaa accttgtgac aatgttggct
    11281 aatcgctctg atctcggagc ttttggcgac tacgcaaaag cgcagactcc gctgtatttt
    11341 aaccatattg agcaaacact ttcagataaa aaatggattg tgggtgatga actaaccggt
    11401 gcggattttt ctctctgttt cccactacaa tgggggcgta attttgttga aatggcaaat
    11461 tacccgaata ttgcacgcta tttagaacag gtggaaaatc accctgctta ccaaaaagcg
    11521 aatcaaaaag ccctgaagct tgatatgaat agattttaat actcttttta atccctaaca
    11581 ttttgttagg gatttttgaa tataaaatca attaatgtga ataattattc aaaaataaac
    11641 ttgagtttag ccttaaatag ccttagacta ccgagcagaa aaagtcaaag aaggattttc
    11701 aatgagcaaa tacaagattt ttgttgatgg ggcagtagga acaaccgggc tacgcattca
    11761 cgaacgttta agccaagcgg acgatattga attattaacc ttgcccgaag agcagcggaa
    11821 agatttgaac gcccgtgtgg caaaagtcgc agaggcggat ttaactttcc tctgtttgcc
    11881 ggatgaagcc tcaaaagaat tagtagcaaa tgcaccggaa aatacccgaa tttgcgatac
    11941 ttcaaccgct catcgggtca atcctaattg ggtttatggt tttccggaat tgagcggaca
    12001 acgtgaaaaa atccaaaatg ccaagcgtgt tgcggtgccg ggttgccatg ccacgggcta
    12061 tattgcgttg gttcgtccac tggtggaaaa agggattctg cccgccgatt accctttaag
    12121 ttgtcattcc ttaaccggct attcaggcgg tggcaaagcg atgattgctg actatgaaaa
    12181 tgaaaacagc ccaaatgctt tcaatgcccc tcgtgtttac ggtttaactc tccaacacaa
    12241 acatttgcct gaaatgcagg cagttaccca aatgcaaaac ccaccgattt tcacccctgt
    12301 ggttgctgat tattacagcg gaatgttagt cactgtgcca ttgcagatct tcgccttaca
    12361 agcggtcaaa tccggcgaag aaattgcaaa tttgctcgcc gattactacc aaaccagccg
    12421 actaattcac gttcaccctt tccaatctct acccgaagac ggaatgcttg ccgcgaatgc
    12481 ttatgcaggt aaagacagct tagagatttt tatttacggc aacagcaccc aacttttact
    12541 tgctgcccgt tttgacaatt taggcaaagg ggcatcaggt gccgcagtgc agtgtatgaa
    12601 tattatgttg ggaagagatg aggttgaggg gttagagctt taaatataaa tgtagggaca
    12661 ggtcctgtgc ctgtccgata atcatcgccc atattcggac gggcacagga cccgtcccta
    12721 caagagaaag aaatatgcaa caacaagaaa tcaatcaatt tgcaaattta ttagaaaaat
    12781 ccaccgcttg tttggtgaaa tggcagggta aaatcattgt ggtgaaatat ggcggtaacg
    12841 caatgattaa tgaggaactg aaaaaatcag tgatggcaga tctgctgtta cttcatcgtt
    12901 taggcgtaaa agtggtactg gtacacggtg gcgggctgga gatttcacaa ggcgtgaaat
    12961 tattgggtaa agaaccgcaa tttatcaacg ggttgcgtgt taccgatagc gatacgatta
    13021 acgtggtttt gcaaatgttg gcaggcaaag ttaataaaag ccttgtcgcc ttattaaaag
    13081 ggaaaggcat tgggctgtgt ggtattgatg gggcgatgtt gcaatgcaaa aaattagagg
    13141 cagaggtgga ttacggcttt gtgggcgata ttgtgaaagt cgatccaact gtgattgaaa
    13201 ttgctcttaa tgcgggcttg attccggttg tttccacggt gggcgttgat gaaaacgggc
    13261 aggcttataa cattaatgca gacaccgctg ccagcgagat tgcgattgcg ttacaagcgg
    13321 aaaaattggt ctcgatgacc gatattgcag gtttattgcg agatcgcttt gatgaaagca
    13381 ccttaattcc ggaagtggaa gtaagcgaag tgcagtccct gattgagcaa ggcattattg
    13441 ccggtgggat gatccccaaa attgcgtgct gtaccgattt catcagagct ggtggctctg
    13501 aggcaaatat tattgacggg cgaatcgacc acgccatttt ggtagaaatg ttcggtggca
    13561 aaaacggcac acggttttat aaaaaataac aggaaagtga aatgacaagc agtaatacga
    13621 ttaagcaatt agataaggat tatatcgccc aaacctatgg cagatttgac cttgcactgt
    13681 cgcacggaaa aggctgtgaa gtgtgggatt ttgagggcaa taagtatctt gattttacca
    13741 gtggcattgg ggtaaatagt ttaggctggg cggatgagga ttggctacaa gctgttacca
    13801 cacaagccgg caaattagct cacacctcaa acctgttttt taccgaaccg gcaagccaat
    13861 tagcccaaaa attagtggct gcaagcggtc taaaacgggc atttttttgc aattcagggg
    13921 cagaggcaaa tgaaggagca attaaaaccg cccgcaaata tagtttcgac aaatacggtt
    13981 ccggtcgttc aacggtttta accctcgtga actcttttca cggacgaacc atttcaaccc
    14041 tcgcatccac tgggcaagag gtattccaca agcatttttt cccctttaca gagggctttg
    14101 aatatttacc tgtaaatggc attgaggcac tgaaagctcg cttggaaact gagaacgttt
    14161 gcgggatttt gctggaggtg gtgcagggcg agggcggtgt ttgcccatta gaggcggatt
    14221 atctgcacgc cgtgcaaagc ctgtgccaag aaaaagatat tttatttatg attgatgagg
    14281 tgcaaaccgg cattgggcga acgggcacac tttttgctta tcaacaattt gatttaactc
    14341 ctggtttagt cacgctcgct aaaggcttgg gcggcggctt gccgattggt gctttcctgt
    14401 taggcgaaaa agtggaaatg acattaggca aaagcgacca cggctcaacc tttggtggca
    14461 atcctgtttc ctgtgctgct gcaaatgtag taatcgataa aataaacgcc gaatttctcg
    14521 cccaagtgca acaaaaaggg cagttgttac agcaacgctt agcgagctta ccaaaagtta
    14581 aatccgtttc aggcttaggt ttaatgctcg gcgtagaatt tgaggaaggc attttagccg
    14641 ctgatattgt tgcaaaatgt atcaacaaag gtgtgctgtt tttaaccgct aaaagcaagt
    14701 taaggctact cccaccgctg atgatctctg aacaacagat agaacaagga atcagagtgt
    14761 tagaggatgt cttgaaagat tcttgagtta ttataaacag taggaatatc ttcttactgt
    14821 tttttattac tattatatag tagcctactt taatctgttg tcactttata tttcttctta
    14881 tgtgtacgat atatcgtgca ataacttccc ttgtttatct gtataacatt ttatttaata
    14941 gaatgactta taaatcaagg agtgacttat gtctaatcaa attgcgttat tgttgatgag
    15001 ccacggcagt tttgcgaggg cggcgttggc gagtgccgag ctgattgtcg ggcagcagga
    15061 aaatgtggca gctatcggcg tagtagcagt ggataatgta gcggacatta aacggcagat
    15121 ggagcaaacc attgctgagt taaacaccga caaaggcttg attattctca ccgatattgt
    15181 tggtggtacg ccgatgaatc ttgcctcttc tcaattaacc caccctaatg tttttgcctg
    15241 ttcgggtttg aatttacctt tattgctaga agtgctgatg agccgtgacg gcaatttgca
    15301 agaaattcgg gaaaatctac cgcttgcata ccaaaacgga tttagcctac gcacacaaca
    15361 agattttgtt tcacaggagg acgatgatga tctgctttag ccgtattgat gaccgtttaa
    15421 ttcacggtca agtagtcacc acttgggtta atttacaccg tattgaacaa attattgtgt
    15481 taaatgatgc ggtggcagcg gatccaaccc aaaaacagat tttaacgatg gcagcaccgc
    15541 agggaattaa agtggtcgcg tttggcattg aaaaatttgg tgaagtgttg cagaagacac
    15601 aaattacccg ccgtactatg ttgttgttta ccaatagcat tgatgtgtta cgcactgtag
    15661 aactaggtgt atcgattgac aaatttaatg tcggcggaat gcgttatcaa gctaggcgtg
    15721 agcagttaag taaagcggtt tcagttacgc cagaagagcg tcaagcattt aaaaccttat
    15781 tggaaaaggg tgttgaagta acggtacaga tggtaccgaa tgatgaaaaa cttaacttac
    15841 aggagattat ctagctatgc tgactgcact acttgttgcc tgctgggcag gtatttgtgc
    15901 cttagatgat attggcacac agatgatccg ccgtccgttg ttaatcgcac cggtggtcgg
    15961 attgattatg ggggatttgg aaacggcgtt gattattggt gctacgcttg aagtgatgtg
    16021 gatggggatc ggcaatgttg gtgcatattc tgcaccggat atgatttccg gaaccgctat
    16081 tggcaccgca cttggtattg ctgctggtga agcttctact gcggttgcac tcgcagtacc
    16141 gacctcactc ttggcacagc agttactcat tctttaccgc tccggcgtat gtgcattgaa
    16201 cccaattgct gaacgctggg cggcaagcgg tgattttgac aagattttcc gcattcacta
    16261 tatcccaatg ttaattgcct tttctattcg tgctattcca acgttcttag ccgtctatta
    16321 cggggcggac attattgccc aagcggtctc tgctctgccg gcaaaagtga ttaccggatt
    16381 aaatgttgca ggcaaaatta ttcctgccat cggtatcggt ttgctgatgt taatgatgat
    16441 taagaaagcc gaactttgga cgttcttaat tgctggcttt acgttggcgg tttatctcaa
    16501 attatcagta ttgccgatta ccttaattgc actaccgctt gcgttgattt acgacttagc
    16561 agtaagcaaa aaagctgaag ctgcaccaac caaaaccgca gatgaagagg attatgacct
    16621 atgagcaata aaattaccaa acaagattta aacaaagtgt tttggcggat gcaggtgctg
    16681 aacgtcacaa acaacttcca atcgatgcag gcgattggat ttttaagtag ctttattccg
    16741 gtattaaaac gactttataa agatcgtcca caggaagaac gagcggaagc aatgaaacgc
    16801 cacttaaaat tttttaacag ccacgttaat tctgatgcat tgattttagg aattgccgct
    16861 gcggtagaag agactaccaa agaggatgaa aaagagacag taaccgcgat taaaaccggt
    16921 ttaatggggc cgttagcagg gctgggagac agcttgttga aattcacctg gttaccgatt
    16981 tgcggtagta tcggggcggc attggcacta agtggcaatg tgttaggccc gattttaatg
    17041 ttcttgttgt ataacagtgt aaacattgcg acgaagtatt acggtatcca tctaggttac
    17101 agcaaagggg ttgatttaat tcacggtgcg ggtaataaca ttttgcaacg actcggcaat
    17161 atggcaaatg tggttggttt aatggtgatt ggcgcattaa ttgcctccgt tgtgaaagtc
    17221 aaagtagttt cacaaattgc cgctggtgat aatgtgatta aattccaaga gatgttagat
    17281 aaagtgatgc cgggactact cagcttactt ttaactgtcg tgatctactg gattttgaag
    17341 aaaactaacg gcaaatatgc tgcaacgatg atccttgcta cgatggggat ctgtatcggc
    17401 ttagtctatg caggaatact cggctaatgg acagtgtgta tgacattatt cggttggaac
    17461 agggcagata cctgttccgc caacagccgg ctcaatcggt acagattttc tttctggaca
    17521 accctgacag taaggatagc aaatggctgg cggagactga tttggcagag tttgagctga
    17581 aattgagcgc ttgtgaagcc cgtccgttct tcctcattca atcagcaaac ggagaacaga
    17641 ttgttgctga acgcacctta cctgttgccg gaatgaataa ttttcgggat atggggggct
    17701 atgtcgctca tcagggcaag cgagtgaaat ggggcaagtt ataccgctcc gatcatctgc
    17761 ataatttaag agacgaaggc gtggcttatc ttgataaatt gggaattcag actgttattg
    17821 actatcgcag cccgaatgaa gtcgccaaat acccaaatcc cccaattaat ggcagagagc
    17881 aaacttttcg gcttgatccg aatgcacata ctgccgagct tgctgcccaa tttagtgcag
    17941 acaagcacga tgaagatcgt aatttggtca ataaaatcat tgctcaaaaa gctgaaggta
    18001 atcttatcaa tcgctacgac attgtaatgg cacaatatcg taattttgtc gaaaaagcag
    18061 aatgccaaac cgcctttgct gaaatgttaa ggttggcgac agaccctgaa aatgcaccat
    18121 tggttcaaca ctgccgtgga gggaaagatc gcactggttt cggtgcaatg ttactgcttg
    18181 gtattttagg cgtgagtaaa gctgatatta ttgctgatta tatgcttact cattataacc
    18241 gccttgctcg taacgaagag aaaatggcga tttaccgtac cttcactcaa gatcaagatg
    18301 tgttggacta cctattgtct ttaatcgata ctcaacccga atttatcgaa caatcgctta
    18361 atactattga aacccaatat ggtactattg agcaatatgc ccaaagggta ttaggtatta
    18421 ctgcgaagga aattgaagca ttacgggcaa attatttggc gtagaacggt agggtgtaat
    18481 attgaacaca ctacaaatgg agaaatttca tatgcgttat tttgcaaaac attggtataa
    18541 aactaccgct tgtctgacaa caattttcac agcatttcct ctttttgctc aaccaattga
    18601 aaatatacca acttcccact acgaattaga aaaaatcatt atatttagcc gacacgggtt
    18661 acgttcccct cttacagaaa aaggcagtga tttagaaaaa tcaacccctt ataaatgggc
    18721 aaattggagt gtaccgaccg gtcatttaac ccataaaggg acgctgttgg aaacctattt
    18781 tgggcagtat cttggtcaat ggctcacaca taatgggtta ttggacaagg caagctgtga
    18841 aagtgggaag cagattgagg tttatgctaa tagcctgcaa cgtacaattg gcactgcaca
    18901 agctttggtt gccggtgggt tttcaggttg taatgtacaa gttaaacacc accagcagat
    18961 tggaaagatg gatccggtgt ttaatccaat tattcgctcc gatgaccaga catttgtgca
    19021 aacagcatta agcaaaattg acctcaataa aacccatcag tatttagcgc catcctatca
    19081 tttattaagc gaaataatcg attatgctca ttcagaaaaa tgtttgcagg aaaaacagtg
    19141 tgaatttttt aatgatgttg gtaaattaag gattaaaaag gataaataac caggtgtttc
    19201 cggtacgatg cgattaagta aaaatattgt cgatgcctta ttgctgcaat attatgaagg
    19261 ttttccttta aaagagattg caaataacca gcttgatagt gatcagaaat ggcaaacact
    19321 caataaaatt aaaaacgatt accaatttat gctacgagga gatccattta ttgctaaaca
    19381 tatttcatta ccgctattaa aatatattca gcaagattta aatagtgaaa ataaaataac
    19441 acttttagtc ggacacgatt ccaatattat agccttactt tctgcattaa atgttaagcc
    19501 ttataaatta gcacatcaat atgaacaaac tccaatagga gggaaagtct ttattgaaat
    19561 ctggaaagaa aaaagtagcc aagcacaaaa agttaaactg gaatatgtat atcaatctac
    19621 tgaccaaatt cgtaaagcga ttccactaag ccttgataaa ccaccgcaac atcacatttt
    19681 gagtttggat tattgccaag ctgaccaata tggattatgc gattatatgg aatttaaaca
    19741 gttactggaa aaagtcattg ctgatacatt gtgagatttt gacaaagtga gtgaaaaagg
    19801 tagcataaaa aagtcgggac agttgccagc tgctccctgt aagatgttgt ttacagcact
    19861 agtaatgcta ctatccccaa aaagctgctg aaaggcagct tttttgttgt atataaaagt
    19921 acacctttct acgcttcatt ctttttctcc aattaaacct aatttaggac ttctagtgat
    19981 aaattcggta tcatatctta attcactaca tatcgtgcaa gccttaaaat tgaaagggct
    20041 gacgaaatcc tatttaattc tgacacacat aagggaatat tatgtcgcaa gatattcaag
    20101 ccgatttaaa aaagatattg gcactattaa gccgtaaccg tcgatttcaa tcattatttt
    20161 tattactgtt aagaagtgaa caatttatta atagtgatgc actttctacg gagttacagc
    20221 tttcagtacg aacggtaaaa aaagagatta agttattaaa agaaaaactt gaaccttacg
    20281 gcattcagat tttttctcga ccgttttatg gctataaatt attgattcag tttgaagaat
    20341 tacacacgca actaaaacag tatttccaaa tatcacagcc gatgacggta aataataaat
    20401 ttgagtctcg ggtaaatgcg attttacgcc gattactggt gagccagcgt gcattgaaag
    20461 ttgaagattt tcagagtgag ctttatttaa gttttaccag tgccttaaca aaagaattta
    20521 gtcaagttaa agccttgtta ggaaaatatg gattgatact cgaagcgaaa ccctatcacg
    20581 gaatgaacat tgtaggtgaa agttatcgta aaataatgct cacagtacga ttatataaat
    20641 attttaccca gcttgaacat ccatttggaa ttaaagaatt tgaacagtgt tttgcttgtc
    20701 ctatgactga aaaaatccgt gaaaggttag ctaagacaat tattcatttc aatttagtat
    20761 tttctgatat ttatgctgag cggtttatta tttacttacg ctatttttat aatcaacagc
    20821 ctgagttatt gttaccgaag ttaaatttta attatcaaca gacgaatgaa tatcagtttg
    20881 taattaagtt actggaacag cttcgtgaac aagacagtcg ttttgagttt aatccggaag
    20941 ttattcgatt tctgacctat attgcgatag ccagtacaga tctctaccgc tttaaagatt
    21001 gtaattcgga taattaccca ttgttgctag ataaggcttg ggaaattcat cgttttattt
    21061 ttactcagtt ttctgcatat ttaaatttat cggaaattca cgatgacact tgccgtaaag
    21121 atttgcttaa aatgctgatc cctatcgcaa tgaaaatgat gcttagcatt tcagatgatg
    21181 tggatttagg gctatttaac caaacagaac tacatagaaa tccaattttg gctcatacag
    21241 tagaaaaatt agtggatgac attgaaaaaa actacgggta tagcctatct attcgagaac
    21301 agtattttat ttttgatatt ttttccggaa tggttaatcg aattgaatta gaacgtaaac
    21361 cgctccgact ggcgattatt gcccttaatg gcagattaag cacccaacag ttaaaacgga
    21421 atattaagcg gtacttttcc gactatattt tgaaaattga aaccaaagtg ctatatgagc
    21481 ttgccataat ggaagataaa ccttatgact actatctctg taatgaatat ggaaaaaata
    21541 tggctattcc ctataagcct atttattttg ctgacagtag tttaaatgaa aatgaatatg
    21601 caacatcact caacgaagta ttttatcacg cttatcaata tgatgaggtg ttgcctagca
    21661 ttaaatcgat tgaaattgaa gcacaatatc gcctaaatga gtttcatctt gagcaaga
//
LOCUS       DANLXO010000034        21308 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.034, whole genome shotgun sequence.
ACCESSION   DANLXO010000034 DANLXO010000000
VERSION     DANLXO010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21308
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.034"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            32..1684
                     /locus_tag="PXD69_001093"
     CDS             32..1684
                     /locus_tag="PXD69_001093"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HDL6283302.1"
                     /translation="MNGARFITESLKAHGVTTLFGYPGGAIMPTYDAIYDSGLDHLLC
                     RNEQGAAMAAIGYARATGKVGVCIATSGPGATNLITGLGDAALDSIPVVAITGQVASH
                     LIGTDAFQEADVLGLSLACTKHSFIVQNIEELPEILALAFQIAQSGRPGPVLVDIPRD
                     VQLAQTSALPIVYPKEPADAQDPNKLVVAKQLLATAKRPVLYVGGGVSMADGVQAVRN
                     FVKIANIPSVSTLKGLGTIDPTDPLYMGMIGMHGTKAANYAVQECDLLIACGARFDDR
                     VTGKLDTFAPHAKVIHIDIDNAEINKLRQAQVALKGNLIEAVNYLAQPLDIEPWREDV
                     RNLKQQFDFQYQENSGDGNIDAVALLHTLSQRKAKNSIVTTDVGQHQMWSAQHLTYHD
                     PKNYITSAGFGSMGFGLPAAIGAIKARAEDQVILITGDGSIMMNIQELGTLKRADLAV
                     KILLLDNQRLGMVRQWQSLFFHGRHSQTILDDNPDFVLLAKAFDIDGERIEKASEVSD
                     AIDRMFNAKGAYLLHVCIPQEDNVWPLVPPGACNADMLDDEV"
     gene            1694..1912
                     /gene="ilvM"
                     /locus_tag="PXD69_001094"
     CDS             1694..1912
                     /gene="ilvM"
                     /locus_tag="PXD69_001094"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HDL6283303.1"
                     /translation="MEEYQLTLKANKRPETLERILRVIRHRGFEVKCLNVESTDSAFN
                     LNFTLASKRPLSLLSHQLEKLFDIIEIN"
     gene            2125..2598
                     /gene="nrdG"
                     /locus_tag="PXD69_001095"
     CDS             2125..2598
                     /gene="nrdG"
                     /locus_tag="PXD69_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDL6283304.1"
                     /translation="MENLRFSSEQIVWQEVPNETSLAFLITGCPLGCKGCHSADSWKA
                     CLGKELSSEYLSERLKRYQGLISCVLFMGGEWEAEKLLPLLQLAKKQGLNTCLYSGLE
                     QHEIAETLLHELTYLKTGRWIAERGGLESLTTNQRFTDLRNNQNLNHLFIRGASI"
     gene            2595..4376
                     /gene="nrdD"
                     /locus_tag="PXD69_001096"
     CDS             2595..4376
                     /gene="nrdD"
                     /locus_tag="PXD69_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDL6283305.1"
                     /translation="MIRLQPTQLDGKLHFINQYIQAKNAADGSKMDANANVTQKNIAT
                     MEQELMKDFFVQINRAKVSEKIAKIFGKETACEYLRQIEAHEIYVHDETSLKPYCVSV
                     TMYPFLRDGLTKLGGESKAPKHLASFCGSFINFVFAVSSQFAGAVATVEFLTYFDYFA
                     RKDYGDNYLQTHRSDIENHLQQVVYSINQPAAARGYQSVFWNISVYDKFYFEAMFSRF
                     VFPDFEKPNWETTSKLQLFFMQWFNKERSKAILTFPVVTAAMLTEKGKCKDDEFANQM
                     AKELSQGNSFFIYQSDNPDSLASCCRLRNEISDHSFSYSLGAGGVATGSINVITINMN
                     RLVQDNRDLSEEVSKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLHKQFLTIGINGM
                     AEAAESQGLTVGYNPDYIDFVQSRLKIIFQANQAAGEKYGVKFNTEFVPAENLGVKNA
                     KWDKEDGYFVPRDCYNSYFYVVEDEEINALDKFLLHGRELIEWLDGGSALHLNLDEAL
                     TQTGYRSLLDTAAKTGCNYFCINVKITICNECSHIDKRTLHSCSKCGSDNIDYGTRVI
                     GYLKRVSAFSSARQKEHSLRFYHREAA"
     regulatory      4433..4529
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            4586..5404
                     /gene="thiM"
                     /locus_tag="PXD69_001097"
     CDS             4586..5404
                     /gene="thiM"
                     /locus_tag="PXD69_001097"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDL6283306.1"
                     /translation="MTTSLPYHSHYLQKIRQNRPLVHNITNIVAANFSANGLLALGAS
                     PIMAAAIEEMESVPALSNAVVINIGTLIGKEVEAMELAGKTANRLGIPLILDPVGVGA
                     TPFRRQTVETLVDQIHFTAIRGNAGELATLAGVEWQAKGVDAGEGSHNVVEIAQQIAK
                     RYQTLVAISGETDVVSSGSHTALLHNGSPMFPKITASGCLLSAVCGAFLAVADKEHYF
                     NALIEACAAYAVAGEVAAQALKPTQYGQFAVNLLDTLGALTPETVEQYVRVEYV"
     gene            5397..6710
                     /locus_tag="PXD69_001098"
     CDS             5397..6710
                     /locus_tag="PXD69_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283307.1"
                     /translation="MSKTHSNPTKVAVASMVGTAIEYFDNYIYTMAAVLVFNVQFFNS
                     DDPVSNQLMSLSVLALAFFTRPMGSILFGHFGDKYGRKQTLIASLLLMGLSTVAIGLL
                     PNYAAIGIWATVLLCLCRIGQGLGLGGEWGGAALVATEHAPKHKRAFFGIFPQMGAPI
                     GLLLANGAFYLVNLIYGEQTFLDWAWRIPFVASIVMIAIGLYIRIKISESPIFLKAEQ
                     QGKNRHTPLKTLFSQHLKPFMIGVLIATAGYVLFYILVAFTPIFVKSPVAVSQAGHAT
                     GLGLPVNLYTQYLLITSVIFGIAIFFSGIYSDKIGRRLLLLLATGATVVYGLTMPFFL
                     ENGTPTSIFIFLTIGMILIGLSFGPMAVILPELFPTEVRYTGASLAYTAAGILGASVF
                     TIIAVKINENFGLFGVGGYLSVASLLSFWALWQVHETKDLELEEI"
     regulatory      6846..6942
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            7010..8539
                     /gene="thiE"
                     /locus_tag="PXD69_001099"
     CDS             7010..8539
                     /gene="thiE"
                     /locus_tag="PXD69_001099"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDL6283308.1"
                     /translation="MSNYSNSPYQPNVIWTVAGSDSCAGAGLQTDLHTFHDFNLVGCS
                     VVTSVTAQHPHGVLCVTPVDDHTFRQQFEALLVQGYPNAIKIGLLCSQAQVEILCEYI
                     QKIRAESSHYCYVVYDPVAVASSGQALSDSILLQIVQQKLYPLVDLITPNGTELALLS
                     DTEIQTFGDVKTASHKLFAQGIKAVLAKGGHFEWLGETVRDYLLTANEIYAFSHARQQ
                     SVNTHGTGCTYASAVGAMLATGFDLADAVTVATAYLQKGLSEKQGRGQTALSSLCHTG
                     YPDDIAFFPQTELISAPLKLPKEPFAPTEYQLGLYPVVDSVKWLERLILVGVKTLQIR
                     IKNRPLAEIEQEIAHSVALAKQHNVRLFVNDYWQLAMKYQAYGVHLGQEDLATADLNA
                     IQQSGLRLGVSTHCYFEIMRALAVKPSYIAFGHVFPTQTKVMPSQPQGLTNLAKYVAL
                     VAPLNIPTVAIGGINEQSIENVMHTGVGSAAVVSAVTQAKDWQQAVKNLAKFANGGRN
                     E"
     gene            8532..9704
                     /gene="cytX"
                     /locus_tag="PXD69_001100"
     CDS             8532..9704
                     /gene="cytX"
                     /locus_tag="PXD69_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HDL6283309.1"
                     /translation="MNRTLSTLNSGLIWAGAGISASAIVVGTWIAPLGWQQGLLAIVL
                     GHLLGGILFFAAGLIGAKTGKNAMQTVQISFGRGSVFFSLANVLQLVGWTAIMIYTGA
                     EISNALSLALWEYSAFSLWAIVLGLLIVLWLFTGSNQVGKFKLVTLIAMFLLTLWLSI
                     KVLNGQENFPVSGEMPFSTAVELATIMPLSWLPLVSDYTAKAKKPFAATLSATIGYLI
                     TSAWMYALGLGMVLFTGQTEIAPMLLMTGMSLIGIMVMILSTVTTTFLDAYSAGVSAG
                     NITAKFKETPTAILVTIIGTLLAISLPVTQYENFLLLIGSVFAPMIAVQIADFFVLKR
                     HQAQPNVDWVAAGLWLVGFVLYHLLSYHQVHLLLGLTIPVMLVIFLSTIFVRRFTK"
     gene            9743..9952
                     /locus_tag="PXD69_001101"
     CDS             9743..9952
                     /locus_tag="PXD69_001101"
                     /inference="COORDINATES: protein motif:HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6283310.1"
                     /translation="MESLVLNNDWVVTPQAQLAYHTINGKADEERLNLLVARAGVRVA
                     KGFALNNGWNLQPYAEVNGIAEKGQ"
     gene            9960..10136
                     /locus_tag="PXD69_001102"
     CDS             9960..10136
                     /locus_tag="PXD69_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6283311.1"
                     /translation="MQVNQYQFGVAENKGRVQGSLGLSAGNGNHRLGLEASVASGKKL
                     KQPFNVLVNYRYQW"
     gene            complement(10177..12033)
                     /gene="sppA"
                     /locus_tag="PXD69_001103"
     CDS             complement(10177..12033)
                     /gene="sppA"
                     /locus_tag="PXD69_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDL6283312.1"
                     /translation="MLTILKAFYRIFRCIRECVINLFFILFILLLVPVVAFISSSGST
                     QKPVFNQGALRLNLDGYLADNREEFTDFYRLVQSELGSSEPFKISTFDVVQAISHAKN
                     DPKITGLVLDLQKLQSADFSSLDFIGNEINNFKQSGKPVIAVGEDYSQKQYYLASFAD
                     EIYLNKVGAVDLKGLNYSNTYFKTLLDKIEAEPHIFRVGTYKSAVEPFMRDDMSEEAK
                     QNARGWLNGTWQQTVATLAQNRNIEPQALDLSPANYIEKYKQAKGDDAQLALNQKWVS
                     QLVSSQESRDKLIAQFGKNSEGSYNQIEFLDYMTELNDRFAEVNAPKIAVVNVEGAIA
                     GGESDEMNVGSETLVKLLQQARDDKNVEGLILRINSPGGSAVASELIRQEVEAFQQAG
                     KPVVASMGGMAASGGYWIAATSDKIIASPNTLTGSIGIFGLAVTFEKTAKNLGVSEDG
                     IATSALAQQAGLKSLPQEQAEVLQIGIENGYDRFLELVSRGRKMPKEVVDKVAQGQVW
                     LGTDALKHGLVDELGNFNVAYNALSELINQKREAENQPKVEQFGLQWFAEQDDSLFGT
                     LARDFKAQLQFSVANWLDLPLLKQPQQQLETLSRFNDPKQMYLYCLNCGKID"
     gene            12136..12699
                     /locus_tag="PXD69_001104"
     CDS             12136..12699
                     /locus_tag="PXD69_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL6283313.1"
                     /translation="MQILDLLHHRRSNKKFGDKAPNAEQLEQILKAGLRVPDHGRLKP
                     YRFVVIEKSGMPQFGECLKSAVAEFDMGEERLKKAEKLANQAPMIIGVVATLDDSIAK
                     VPSWEQMITAGCATYAIQLAANAQGFDTVWITNKWINGSALRSAFGCQESDKIIALIM
                     LGSPAEGEQIALAPESESLEGFVRYLK"
     gene            complement(12770..15094)
                     /locus_tag="PXD69_001105"
     CDS             complement(12770..15094)
                     /locus_tag="PXD69_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDL6283314.1"
                     /translation="MTDLNLKISQIIAGELNVGSHQILAAITLLGEGNTIPFIARYRK
                     EVTGGLDDTQLRHFETRLIYLREMDERRQTILKSIEEQGKLTDELKAKILSSESKTEL
                     EDLYLPYKPKRRTRGQIAIEAGLEPLADSLWNDPKQDPETLAANFVDAEKGVADTKAA
                     LDGARYILMERFSEDAELLAKLRQYLTAYATLESKVIDGKEEEGEKFRDYFAHSEPFN
                     SVPSHRALAMFRGRNEGVLSLSLNADPTAEEGTKSSHCEEIIREHLGVIFNNQPADKW
                     REQVIAWTWKIKAALHLETELMATLCEKAEEEAIDVFARNLSALLMAAPAGARNTMGL
                     DPGLRTGVKVAVVDNTGKLLDTATIYPHTGREAEAQLAIFSLIKQHNVELIAIGNGTA
                     SRETERFAKAVIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIAR
                     RLQDPLAELVKIEPKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLL
                     ARVAGMTKTLAQNIVAFRDENGRFTSRSELKKVPRLGPKAFEQCAGFMRIIGGKNALD
                     ASSVHPEAYPVVEKILQATTSTLAELMGNNSKIHSLNAKDFVDEQFGLPTVNDIFKEL
                     EKPGRDPRGEFKTAVFMDGVEEITDLKAGMILEGTVTNVANFGAFVDIGVHQDGLVHI
                     SMLSNSFVEDPHTVVKAGDVVKVKVLEVDAARKRIALTMRLDDKPTDKKEPTSGRNSA
                     EICKNTQKNDRLQSNNRNAFGNNAFADALKGWKK"
     gene            complement(15094..15648)
                     /gene="pilW"
                     /locus_tag="PXD69_001106"
     CDS             complement(15094..15648)
                     /gene="pilW"
                     /locus_tag="PXD69_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HDL6283315.1"
                     /translation="MFAKFFPKMTACILIFLLAACSSLPPSSSEVEFNRSEAVKARIN
                     LALAYLEQNDFPKAKQNIDKALAHDEKDYLPYSVLAYYYQQTGDAENAEKAYQTALKL
                     SQNRPDVLNNYGTFLCKQGQFQQAYQQFEQAVKSKAPYYHQADSLENMVLCAKKEPNL
                     QKIAETLTELEKLDKPRANLLKEN"
     gene            15868..16119
                     /locus_tag="PXD69_001107"
     CDS             15868..16119
                     /locus_tag="PXD69_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6283316.1"
                     /translation="MKIVVFQRKALKQLRKIPTGAEIRRKCDDLAYFPYCANIKALTN
                     HQYDYRFRVGNYRIFFNIEGETMNIVSIEEVKKRDERTY"
     gene            16103..16450
                     /locus_tag="PXD69_001108"
     CDS             16103..16450
                     /locus_tag="PXD69_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6283317.1"
                     /translation="MKELTNIQYLNNEEGKPAFAVLPIATLEWLKQKANIKTAIETGI
                     PSAVAGIALDNNYSALRAWREYLGLTQEEVAQRLGISQSAYSQHENAKNLRKTTRIKI
                     AYALGLNEEQLDF"
     gene            complement(16491..17651)
                     /gene="trmG/rlmN"
                     /locus_tag="PXD69_001109"
     CDS             complement(16491..17651)
                     /gene="trmG/rlmN"
                     /locus_tag="PXD69_001109"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HDL6283318.1"
                     /translation="MSELITNAGCGSAEQPKEKINLLNLNRQEMRELFAEMGEKPFRA
                     DQLMKWIYHFGEENFDNMSNINKVLREKLKRIAEIKAPEVAVEQRSADGTIKWAMQVG
                     DQQIETVYIPEDDRATLCVSSQVGCALACTFCSTAQQGFNRNLSVAEIIGQVWRASKI
                     IGNFGVTGVRPITNVVMMGMGEPLLNMNNVIPAMEIMLDDFAYGLSKRRVTLSTSGVV
                     PALDKMREQIDVALAISLHAPNDELRDELVPINKKYNIKMLMDSVNKYREVSNANHGK
                     VTIEYVMLDHVNDSTNHAHQLAEVLKNTPCKINLIPWNPFPEAPYGKSSNSRVDRFQK
                     TLMEYGFTVTVRKTRGDDIDAACGQLAGDVIDRTKRTLEKRKFGQGIAVKTH"
     gene            17911..18807
                     /locus_tag="PXD69_001110"
     CDS             17911..18807
                     /locus_tag="PXD69_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDL6283319.1"
                     /translation="MKLSTIKKALVLTFGLSAAMAMAEPFKVVTTFTVIQDIAQNVAG
                     DKATVESITKPGAEIHDYQPTPKDIVKAQKADLVLWNGMNLERWFERFFENVKGKPAV
                     VVTEGITPMPITEGEYKNLPNPHAWMSTDNALIYIENIRAALVKYDPQNADTYNANAK
                     AYAEKVKGIAEPLRQRLAFIPEQQRWLVTSEGAFSYLAKDYNLKELYLWAINAEEQGS
                     PKQVKKVIDGVKANKIPVVFSESTVSDKPAKQVAKETGALYGGVIYVDSLSEKDGPVP
                     TYLDLLKVTIGTIVEGFERSKK"
     gene            18820..19563
                     /locus_tag="PXD69_001111"
     CDS             18820..19563
                     /locus_tag="PXD69_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDL6283320.1"
                     /translation="MTTVSASISVENLSVRYNNGHIALQDVSFHLENGTICALIGVNG
                     GGKSTLFKSLMGLVKPLTGSVKLSQLPIAKALKQNLVSYVPQSEEVDWQFPVSVYDVV
                     MMGRYGYMNFLRRPSQTDKLKVEQAMQRLDVLHLKDRQIGELSGGQKKRVFLARALAQ
                     ESKIILLDEPFTGVDVKTENAIVELLKQLKNEGHLILVSTHNLASVPSFCDQVLMVNR
                     TLLAKGKTEEIFNNQNLERVFGGLLHYQK"
     gene            complement(19620..20429)
                     /locus_tag="PXD69_001112"
     CDS             complement(19620..20429)
                     /locus_tag="PXD69_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL6283321.1"
                     /translation="MLNWILEPLQFEFMQIALITAILVAGVSAVLSCYLVLKGWSLMG
                     DAISHAVLPGVVISSLAGLPLSIGAFFSGLGCALSVGYLKENSRLKEDTVMGIVFSGM
                     FAFGILLFTAFNTGEHLTHILFGNLLGVTKSDLLQTLLISLFTFVVMVAKRKDFLLYC
                     FDVNQAKVAGLPVRLLHYGLLSLLALTIISAMQVVGVILVVAMLITPGITAYLLTKRF
                     DSMLLIALGVAIFSSVFGTLLSYHIDAATGPTIILVQAAIFFLSFAYSKIH"
     gene            complement(20422..21282)
                     /locus_tag="PXD69_001113"
     CDS             complement(20422..21282)
                     /locus_tag="PXD69_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL6283322.1"
                     /translation="MLDLLLEPFTYNYMQKAIFVSMGVGLVCAFLSAFLMLKGWSLIG
                     DALSHAVVPGVAIAYALKLPYAFGAFFSGILAALSILWVKSLTKIKEDAVIGFIFTTF
                     FALGMFIVSLNPTSVDVNSIVMGNILGIADDDLWQVVLIIAISLLGLILFWKDLLLVF
                     FDEHHALSVGLSPLRYKVIFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDRF
                     PRLVLIAMLIGTLTSGIGAYLSYFLDGATGAVIVCLQTLIFLFAFCFAPKYGLITQKR
                     KLHRVEVQNA"
BASE COUNT         6106 a         4731 c         4519 g         5952 t
ORIGIN      
        1 aaataataaa aatattaagg acacaacatc catgaatgga gcaagattta tcaccgagag
       61 tttaaaagct cacggggtaa cgacactttt tggctatccg ggcggggcta ttatgcctac
      121 ctatgatgca atttatgatt caggcttaga tcatttactt tgccgcaatg aacaaggtgc
      181 tgcaatggca gctatcggtt atgcccgtgc aacaggtaaa gtaggggttt gtattgcgac
      241 ctccggccct ggggcaacta atttaatcac cggtttaggc gatgccgcac ttgattctat
      301 tcctgtggta gcaattaccg gacaagttgc cagccattta atcggcactg atgccttcca
      361 agaagctgat gtactaggtt tgtcactcgc ttgcactaaa cacagtttta ttgttcagaa
      421 tattgaggag ctccctgaaa ttttagccct cgcattccaa attgcacaaa gtggcagacc
      481 tggtccggtg ctggtcgata ttccacgtga tgtgcaacta gctcaaactt cggctctgcc
      541 tatcgtttat cctaaagaac ctgccgatgc acaagatccc aacaaattag tggttgccaa
      601 acaattatta gccaccgcca aacgcccggt actttatgtc ggcggtggcg ttagtatggc
      661 tgatggtgta caagcggtca gaaattttgt aaaaattgca aatattccgt ctgtttctac
      721 cttaaaaggg ttaggcacta tcgatccaac cgatccgctc tatatgggaa tgatcggtat
      781 gcacggcaca aaagcagcaa attacgcggt acaagagtgt gatttactca ttgcctgtgg
      841 tgcccgcttt gatgaccgtg ttaccggcaa attagacact tttgcccctc acgctaaagt
      901 gattcacatt gatatcgaca atgcggaaat caacaagctc cgtcaagcac aagttgcctt
      961 aaaagggaat ttgattgaag ccgtgaatta cttggctcaa ccgttagata ttgaaccatg
     1021 gcgtgaagat gtgcgtaatt taaagcagca atttgacttt caatatcaag aaaatagtgg
     1081 tgatggcaat attgatgccg tggcgttatt acacacgctt tcacagcgga aagccaaaaa
     1141 cagcatcgtc actaccgatg tagggcagca tcaaatgtgg tcggcacaac atttaactta
     1201 tcacgatccg aaaaactata tcacctctgc cggttttggc tctatgggtt ttggcttgcc
     1261 tgcggcgatt ggggcaatca aagctcgagc ggaagatcag gttattttaa ttaccggtga
     1321 tggctcgatt atgatgaata ttcaagaact cggcacgctt aaaagagctg atttagcggt
     1381 caaaatccta ttactggata accaacgttt aggtatggtt cgccaatggc aatcgctgtt
     1441 cttccacggg cgacacagcc aaaccatttt agatgataac cctgattttg tgttgttggc
     1501 gaaagccttt gatattgacg gtgagcgaat tgagaaagcg agcgaagtgt cagatgcaat
     1561 agacagaatg ttcaatgcca aaggggctta cttacttcac gtttgtattc cacaggaaga
     1621 taacgtttgg ccactggtac cgccgggggc gtgtaatgcc gatatgttag acgatgaggt
     1681 ataggagaat aagatggaag aatatcaatt aacgcttaaa gctaacaaac gccctgaaac
     1741 cttagagcgt attttacggg ttatacgtca ccgtggtttt gaggtgaaat gcttaaatgt
     1801 agaatcaaca gacagcgcct ttaacctaaa ttttacatta gcaagtaaac gtccactctc
     1861 tcttttaagc catcaattag aaaaactgtt tgatatcatt gaaatcaatt aatcagactt
     1921 ttcattcgcc gtgtaaaaaa atacacggct tttttatgct taaaatttat cattcgctat
     1981 ccttttgatt ttattcattt cttcaaattt caactctttt ttttcactta ttgctcttta
     2041 ttttcccatt caacagatct aacatactat atatagtgtt aaataatgtt aaaaaacaca
     2101 atatattgtg ttaatgaatt agtaatggaa aatctcagat tcagctcgga acaaattgtt
     2161 tggcaagaag tgccgaatga gacctcactt gcttttctga ttacaggctg cccgcttggc
     2221 tgtaaaggtt gccatagtgc ggatagctgg aaagcctgtc ttgggaaaga gcttagcagt
     2281 gaatatctct ctgaacgcct aaaacgctac caaggcttaa ttagctgcgt attgtttatg
     2341 ggcggagaat gggaagcaga aaaattactg ccgctgttgc aactggcaaa aaaacagggg
     2401 ctaaacacct gtctttatag tggtttggag cagcacgaaa tcgccgagac tttattacac
     2461 gagctaacct acttaaaaac cgggcgttgg attgccgaac gaggaggatt ggaaagttta
     2521 accaccaacc aacgctttac tgatttacgc aataaccaaa atcttaacca tctttttatt
     2581 cgaggagctt caatatgatt cgcttacaac cgacacaatt agacggaaaa ctacatttca
     2641 ttaaccaata tattcaagcc aaaaatgccg cagacggttc aaaaatggac gccaacgcta
     2701 acgtcacgca aaaaaacata gcgacaatgg aacaggagct aatgaaagat ttttttgtgc
     2761 aaatcaaccg agcaaaagtg agtgaaaaaa ttgcaaaaat ttttggaaaa gaaaccgctt
     2821 gtgaatattt acgtcaaatc gaagcacacg aaatttacgt acacgatgaa accagcctaa
     2881 aaccctactg cgtttcagtc actatgtacc ctttcttgcg tgatggtttg actaaactcg
     2941 gcggcgaatc caaagccccg aaacatttag cctcattctg cggttctttt atcaattttg
     3001 tctttgcagt cagttctcag tttgccggtg cagtcgccac ggttgaattt ctgacctatt
     3061 ttgactattt tgcccgcaaa gattacggcg ataattactt acagactcat cgttcagata
     3121 ttgaaaacca cctgcagcag gttgtgtata gcatcaacca accggcagcc gctcgtggtt
     3181 atcaaagcgt cttttggaat atttcagtgt atgacaaatt ctattttgaa gcgatgttta
     3241 gccgttttgt ttttcctgat tttgagaaac caaattggga aaccacttca aaattacaac
     3301 ttttctttat gcaatggttc aataaagagc gaagcaaagc gattctcact ttccctgttg
     3361 tgaccgcagc aatgcttacc gaaaagggca aatgtaaaga tgacgagttt gccaatcaaa
     3421 tggcaaaaga gctatctcaa ggcaattcat tctttattta tcaatcagat aatccggatt
     3481 cccttgcttc ttgctgccgc ttgagaaatg aaatcagcga tcatagcttc tcctattcat
     3541 taggggctgg aggtgttgcg acaggttcaa tcaatgtaat tactattaat atgaaccgtt
     3601 tggtgcaaga taaccgtgat ttaagcgaag aagtcagcaa gatccataaa tatcaatacg
     3661 cttaccgcaa actgatggaa gagtatttag ctgccggtat gttgccggtt tacgatgccg
     3721 gttttatttc actgcataaa caattcctga ctattggcat taacggaatg gcagaagctg
     3781 ctgaatcaca aggtttaacc gtaggttaca atccagacta tattgatttt gtgcaatctc
     3841 ggttaaaaat tattttccaa gctaaccaag cagccggtga aaagtatggg gtaaaattta
     3901 ataccgaatt tgtgcctgct gaaaatttag gggtcaaaaa cgccaaatgg gacaaagagg
     3961 acggctattt cgtaccacga gattgctaca attcctattt ctatgtggta gaagatgaag
     4021 aaattaatgc tttggataaa ttcttactgc acggcagaga gctgattgaa tggctggacg
     4081 gaggctccgc tctacacttg aatttagacg aagccttaac ccaaaccgga tatcgctcct
     4141 tgctggatac cgccgctaaa accggctgca attatttttg tattaacgtt aaaatcacga
     4201 tttgcaacga atgtagccac atcgacaaac gcacgttgca cagttgtagc aaatgtggct
     4261 ccgataatat tgattacggc actcgggtaa tcggctattt aaaacgagtc tccgccttta
     4321 gttccgcccg ccaaaaagag cacagcttgc gtttctatca ccgagaagca gcttaattga
     4381 aaactgcagt tgtagccctt tacaaccgct tttttagtga ttatattaaa gcctcattta
     4441 gtcggggtgc ttgcctaagg gcaagctgag aaatacccgt tgaacctgat gcagttagca
     4501 ctgacgtagg aaactaaagg cgtaaaccca tctattcccc gttggtgttg gtgcgttgtt
     4561 tttcaatcat attaaggaat aaacgatgac cacatcactc ccctatcact cgcattattt
     4621 gcaaaaaatt cgacaaaatc gaccgcttgt tcacaacatt accaacattg ttgccgctaa
     4681 tttttctgcc aacggcttat tggctcttgg tgcttctccc attatggcag ctgctattga
     4741 ggagatggaa tccgtgccgg cactcagtaa cgccgtggtg attaatatcg gcacgcttat
     4801 cggcaaagaa gtagaagcaa tggagcttgc tggcaaaacc gccaaccgtt taggtattcc
     4861 gctcattctt gaccctgtcg gcgttggagc aacacctttc cgccgtcaaa cagttgaaac
     4921 cttagtcgac caaattcact tcaccgccat tcgtggaaat gcgggggaac tagctaccct
     4981 cgccggtgta gaatggcaag ccaaaggcgt tgatgccggc gaaggctcgc ataatgtggt
     5041 tgaaatcgcc caacagattg ccaaacgtta ccaaacctta gtcgcaatca gtggtgaaac
     5101 cgatgtggta agctctggct cacacacagc tttattgcac aacggcagcc cgatgttccc
     5161 caaaattacc gcttcaggct gtttattaag tgcggtatgc ggggcattct tagccgttgc
     5221 cgacaaagag cactatttca acgcacttat tgaggcttgc gccgcttatg ccgttgcagg
     5281 cgaagtggct gctcaagcac tcaaaccaac tcaatacggg caatttgccg tcaatctgct
     5341 ggataccctt ggggcattaa cgcctgaaac cgttgagcaa tatgtgaggg ttgaatatgt
     5401 ctaaaactca ctcaaaccca actaaagtgg cggttgcctc aatggtcggc acggcgattg
     5461 aatattttga taactacatc tacacgatgg cagcagtgct ggtgtttaat gtgcagtttt
     5521 ttaatagcga tgatccggtt tccaaccaat taatgtcgct ttccgtacta gctcttgcct
     5581 ttttcacccg cccgatgggg tcgattttat tcgggcattt cggcgataaa tacggacgca
     5641 aacaaactct gattgcctcg ctcttattaa tgggcttatc taccgtagca atcgggcttt
     5701 tgcctaatta tgccgccatt ggcatttggg caaccgtgtt actctgcctc tgtagaatcg
     5761 gacaaggttt aggcttaggc ggcgaatggg gcggagctgc tctcgttgcc actgaacacg
     5821 ccccgaaaca caagcgggca ttttttggta tttttccgca aatgggcgcc ccaatcggct
     5881 tgctgttggc aaacggagcg ttctacttgg tgaatttaat ttacggtgaa caaaccttct
     5941 tggattgggc gtggcgaatt ccgtttgtcg cttctattgt gatgatcgcc attgggcttt
     6001 atatccgaat taagatcagc gaaagcccga ttttccttaa agcggaacaa caaggtaaaa
     6061 accgccatac cccgcttaaa actttgttta gccaacacct caagcctttt atgatcggcg
     6121 tgctgattgc caccgccggc tatgtgttgt tctacatttt agttgctttc accccgattt
     6181 tcgtcaaaag cccggtggca gtttctcaag caggacacgc tacaggctta ggtttaccgg
     6241 taaatctcta cacccaatat ttgctgatta cctccgtgat tttcggcatt gcgattttct
     6301 tctccggcat ttattcagac aaaatcggac gccgtttact gctgttactt gccacaggag
     6361 caaccgtagt ttacggctta acaatgccgt ttttcctcga aaacggcaca ccgacttcga
     6421 tctttatttt cctcaccatt ggaatgatct taatcggctt aagcttcggc ccgatggcag
     6481 taattctacc cgaactcttc ccaacagaag tacgttacac aggggcttcg cttgcctaca
     6541 ccgctgccgg tattttagga gctagcgtgt tcactattat tgcggtcaaa atcaatgaaa
     6601 atttcggctt attcggtgta ggcggctatt tatcggttgc ctcattactg agcttctggg
     6661 cattgtggca agtccacgaa accaaagatt tggaattaga ggagatataa aaaaccactc
     6721 acttaacgac ggggcaagtt accaccttgc cccaagatga gggaatgcaa atttccctct
     6781 aatagacttc acaacggata ttttgcattt ttttataaaa aataaccgct tgtaagctat
     6841 actaaaaacg cttgtcggag tgccgtaagg ctgagatcgc aacagcgaga tccgtggaac
     6901 ctgtaggtta gtacctgcgt agggaacaag ttttacccaa attcagattt tgggatcatt
     6961 accacatctc tggcaagcaa aaccctaagc atattatgag gattttgcga tgtctaatta
     7021 ttcaaactct ccataccaac ctaacgtcat ttggacggtt gccggctcag attcctgtgc
     7081 cggtgccggt ctgcaaaccg atttacatac ctttcacgat tttaacctag tgggttgttc
     7141 agtagttact tctgtaacgg ctcaacatcc gcacggtgtg ctgtgtgtaa cgcctgttga
     7201 tgatcacacc ttccgccaac agtttgaagc cttgctggtt caaggctacc cgaacgcaat
     7261 caaaatcggc ttactctgct cgcaagcaca agtagagatc ttgtgtgaat atatccaaaa
     7321 aatccgtgca gaaagctcgc attattgtta tgtggtttac gaccctgtgg cagtggcaag
     7381 cagtgggcag gcgttatccg acagtatttt attgcagata gtgcaacaaa aattgtatcc
     7441 gctggtggat ttaatcactc caaacggcac tgaactcgct ttattaagcg acacagaaat
     7501 ccagaccttt ggtgatgtga aaaccgctag ccacaaactg tttgcacagg gaatcaaagc
     7561 cgtgttagcc aaaggtggac attttgaatg gctgggggaa acggtaagag attatctgct
     7621 gactgcaaat gaaatttatg cctttagtca cgcccgacag caaagtgtga atacccatgg
     7681 cacaggttgc acctatgctt cagcggttgg agcgatgttg gcaaccggct ttgatttagc
     7741 tgatgccgtc actgttgcca ccgcttattt gcaaaaaggc ttatcggaaa aacaaggcag
     7801 agggcaaact gctttaagtt cactttgcca caccggctac cctgatgata tcgctttctt
     7861 cccacaaacc gagctgattt ctgcccctct taaattgccg aaagagcctt ttgctccaac
     7921 ggaatatcaa cttgggcttt accctgttgt agatagcgtt aaatggcttg aacgcttaat
     7981 tcttgtaggg gtaaaaacct tgcaaattag aatcaaaaat cgaccgcttg cagagattga
     8041 gcaagaaatt gcccattcgg tcgcactggc gaaacagcac aatgtgcgtt tgtttgtaaa
     8101 tgattactgg cagttagcca tgaagtatca ggcttacggc gtgcatttag ggcaggagga
     8161 tttagccacc gccgatttaa atgcaattca gcaatctggg ttacggcttg gtgtttcaac
     8221 ccactgctac tttgaaataa tgcgggcatt ggcggtgaaa ccgtcttata tcgcttttgg
     8281 ccacgttttc cctactcaaa ccaaagtaat gccgtctcaa ccacaaggct taacaaattt
     8341 agccaaatat gttgctctcg ttgcaccgct taacattcca actgtggcga ttggtggaat
     8401 taatgagcaa agcattgaaa atgtaatgca taccggtgtc ggcagtgccg cggtggtaag
     8461 tgccgttacc caagcaaaag attggcaaca agcggtcaaa aacttagcaa aatttgcaaa
     8521 tggaggccgt aatgaataga actcttagta cgctaaacag tggtttgatt tgggcgggag
     8581 cgggcattag tgccagtgca atcgtggttg gcacttggat tgccccactt ggctggcaac
     8641 aaggcttgct ggcgatagtg ctagggcatt tattaggcgg cattttgttt tttgctgccg
     8701 gcttaattgg ggcgaaaacc ggcaaaaatg cgatgcaaac ggtgcaaatt tcctttggca
     8761 gaggctcggt gtttttctcc cttgccaatg tgctacagct tgttggttgg acagccatta
     8821 tgatctatac aggggcagag atcagtaatg cccttagcct tgccttatgg gaatattcgg
     8881 ctttctcgct ttgggcaatc gtgcttgggt tgctgattgt gctatggtta tttaccggct
     8941 ctaatcaggt cggaaaattc aagttagtga cattgatagc gatgtttttg ctcaccttat
     9001 ggctaagcat taaggtattg aatgggcagg aaaattttcc tgtttcgggt gaaatgccgt
     9061 ttagcaccgc agtggaatta gcaactatta tgcctctttc gtggctacct ttggtatcag
     9121 actataccgc taaagcgaaa aagccttttg ccgcgaccct ttcggcgacc ataggctatt
     9181 tgatcaccag tgcgtggatg tatgcgttag gtctgggtat ggtgctattt accgggcaaa
     9241 ccgaaattgc ccctatgtta ctaatgacag gaatgagcct tatcggcatt atggtgatga
     9301 ttctttcgac tgtgactacc acgtttcttg atgcctattc cgccggtgtc agtgccggca
     9361 atatcacggc aaaattcaaa gaaaccccaa ccgccattct agtcacaatc atcggcacgc
     9421 tactggcaat cagtttaccg gttacccaat atgaaaattt cctgctgctg ataggctcgg
     9481 tattcgcccc gatgattgcc gtgcaaattg cggatttctt tgtgttaaaa cgccaccaag
     9541 cacagcctaa tgttgattgg gttgctgccg gattatggct tgtcggcttc gtgctatacc
     9601 accttctctc ttaccaccaa gtgcatttac tactcggctt aaccattcca gtgatgttag
     9661 tgatttttct cagcaccatt tttgtgagga ggttcacaaa atagaaagat aagcggttca
     9721 attggagtga aaatttgcta aaattgagtc gcttgtttta aacaatgact gggtagtaac
     9781 accacaagct caacttgcct accacaccat taacggtaaa gccgatgagg aacggttaaa
     9841 tcttttagtt gcccgtgccg gcgtaagagt agcaaaaggc tttgccttga ataatggttg
     9901 gaatctgcaa ccttatgcgg aagtaaacgg cattgctgaa aaaggccaat agtacgaaag
     9961 tgcaagtaaa ccaatatcag tttggagttg ccgaaaacaa gggcagagtg caaggttcac
    10021 ttggcttgag tgcaggaaac ggtaatcacc gtttaggttt agaggcatca gttgcttcag
    10081 gtaagaaact gaaacaacca tttaatgtat tagtaaatta tcgttatcaa tggtaattta
    10141 agagggcagg tgaaaacctg cccttaaatt caataattaa tctatcttcc cacaatttaa
    10201 acagtaaaga tacatctgtt tcggatcgtt aaaacgtgaa agagtctcta gctgttgttg
    10261 cggttgcttc aacagcggta aatcaagcca atttgccacg ctaaattgta attgagcttt
    10321 gaaatcacgg gcaagcgtgc caaataagct gtcatcttgc tccgcaaacc attgtaagcc
    10381 gaactgttcg actttaggtt ggttttccgc ttcacgtttt tggttgatca attcagataa
    10441 cgcattatat gccacattaa aattgcccaa ctcatcaacc aatccgtgtt ttaacgcatc
    10501 agttcccagc cacacttgcc cttgagccac tttatctacc acctcttttg gcattttcct
    10561 gccacgagaa accagctcta aaaaacggtc gtagccgttt tcaatcccaa tttgcagcac
    10621 ttctgcctgc tcttgcggta ggctttttaa accggcttgt tgtgctaggg cagaagtcgc
    10681 tatgccgtct tcgctcacac cgagattttt agcggttttt tcaaaagtta ctgctaaacc
    10741 gaaaataccg atagagccgg taagcgtatt cgggctagca ataattttat cgctggtagc
    10801 cgcaatccaa taaccgcccg atgctgccat tccgcccatt gaagcaacca ccggtttgcc
    10861 ggcttgttga aaggcttcca cttcttggcg aatcagttca gacgccacag cactgccgcc
    10921 ggggctgtta atgcgtagaa ttaagccttc cacatttttg tcatctcgag cttgttgcag
    10981 taattttacc agcgtctcgc tgcccacatt catttcgtca ctttcaccgc cagcaatcgc
    11041 cccttccaca ttcactaccg caattttcgg agcattcact tctgcaaagc ggtcgtttag
    11101 ttcagtcata taatctaaaa attcaatctg gttataactg ccttcgctgt ttttgccaaa
    11161 ctgtgcaatc agtttatccc gactttcttg gctggacact aactgactaa cccatttttg
    11221 atttaatgcc agttgagcat catctccttt agcttgttta tatttttcaa tgtaattggc
    11281 aggcgataaa tccagtgctt gcggttcaat gttgcggttt tgagctagtg ttgccacagt
    11341 ttgttgccaa gtgccgttta accagcctcg ggcattttgt ttcgcctcct cagacatatc
    11401 atcacgcata aacggctcaa ccgccgattt ataagtaccg acacggaaaa tatgcggttc
    11461 agcctcaatt ttatcgagca aggttttgaa ataagtgttg gaataattta agccttttaa
    11521 atccaccgca ccgactttat tgagataaat ttcatcagca aaggaagcaa gataatattg
    11581 tttttgcgag tagtcttcgc ccactgcaat caccggcttg cccgattgtt tgaagttgtt
    11641 gatttcattg ccgataaaat ccaatgagct gaaatcagca ctttgtagct tttgcagatc
    11701 taacaccaag ccggtaattt tcgggtcatt tttagcgtgg ctaatcgctt gcaccacatc
    11761 aaaagtcgag attttaaacg gctcggaact acctaattcc gattgcacca agcggtagaa
    11821 atcagtgaat tcttcccgat tatctgctaa ataaccatct aaatttaaac gtaacgcccc
    11881 ttgattgaac accggctttt gcgtgctgcc agaagagctg ataaatgcga ccaccggcac
    11941 taatagcaaa ataaacagaa taaaaaagag attaatgaca cactctctaa tacaacggaa
    12001 gattcggtaa aatgctttta aaatcgttaa catcggaaat tcctaaaaat aaactcagtc
    12061 ggcacagtat aaagcaatcg ctaaatgaag aaaatatgct attcttgaac gcaaaaaatt
    12121 aacaaaggaa cgcttatgca aatcttggat ttattacacc atcgccgttc aaataaaaaa
    12181 tttggcgata aagccccgaa tgcagaacaa ctggaacaaa ttctaaaagc cggcttgcga
    12241 gtgccggatc acgggcggtt aaagccttat cgctttgtgg tgattgaaaa aagcggtatg
    12301 ccacagtttg gtgaatgctt aaagtctgcg gtagcagaat ttgatatggg cgaggaacgc
    12361 ttaaaaaaag cggaaaaatt agctaatcaa gctccaatga ttatcggcgt ggtagcaaca
    12421 ttagacgaca gcatcgccaa agtgccaagt tgggaacaaa tgattaccgc aggctgtgca
    12481 acttatgcga ttcagttagc ggcaaatgca cagggctttg atacggtttg gatcaccaat
    12541 aaatggatta acggctctgc tcttcgctcc gcttttggtt gccaagaatc tgataaaatc
    12601 attgccttaa ttatgcttgg ctcaccggca gagggcgagc aaattgcatt agcccctgaa
    12661 agtgaaagtt tagaggggtt tgtacgttat cttaagtaag caggttaaca gataaaagtt
    12721 agtaataagg gcgaaaaata tttcgccctt gcttttatct gttttcgcct tacttcttcc
    12781 agccttttaa cgcatcggca aaggcattgt taccaaaagc gttgcgattg ttgctttgca
    12841 agcggtcatt tttctgcgta tttttgcaaa tttctgctga atttcgaccg cttgttggct
    12901 cttttttatc ggttggtttg tcgtctaaac gcatcgtaag ggcaatacgt ttgcgggcag
    12961 cgtccacctc aagcactttg actttcacca catcaccagc tttcactacc gtgtgcggat
    13021 cttcaacaaa agagtttgag agcattgaaa tatgcaccaa gccatcttgg tgtacgccaa
    13081 tatcgacaaa agccccaaag tttgccacat tggtcactgt gccctccaaa atcataccgg
    13141 ctttgaggtc ggtaatttct tccacgccgt ccataaacac ggcggtttta aactctccac
    13201 gagggtcacg ccccggtttt tctaactctt tgaaaatatc gttcaccgtt ggtaaaccaa
    13261 actgctcatc cacaaaatct ttggcgttga gcgagtgaat tttgctgttg ttacccatta
    13321 attctgcaag tgttgaggta gttgcctgta agattttttc taccaccggg taagcttccg
    13381 ggtgaacgct tgaggcatca agggcatttt tcccaccgat aattcgcata aaaccggcac
    13441 actgttcaaa ggctttcggc cctaaacgag gcactttttt cagctctgag cggctggtaa
    13501 aacggccgtt ttcgtcacgg aatgccacga tattttgtgc caatgttttg gtcattcccg
    13561 ccacccgagc cagcaacgga gcggaggctg tattcagatc cacgcccact gcgtttacac
    13621 aatcttctac taccgcatcg agtttacggg caagttggga ttggtttaca tcgtgttgat
    13681 actgcccaac accaatcgct tttggttcga ttttcaccaa ctcggcaagt ggatcttgca
    13741 aacggcgggc aatcgaaacc gctccccgta atgaaacgtc taaatttgga aactcgttag
    13801 ccgcaaattc agaggcagaa tagaccgatg ccccagcctc actcaccacc accgtttgcg
    13861 gtttattctc tttgatttct ttaatcaccg ctttggcaaa acgttcggtt tcacgagagg
    13921 ccgtaccgtt accaatcgca atcagttcca cattgtgttg tttgattaag ctgaaaatcg
    13981 caagctgtgc ctccgcctct cgcccagtgt gagggtaaat tgtggcggta tccagcaatt
    14041 taccggtgtt atccaccacc gccactttca cgccggtacg caagcccggg tctagcccca
    14101 ttgtatttct cgcaccggca ggggctgcca ttaataatgc cgagagattg cgggcaaaca
    14161 catcaatcgc ctcttcttca gctttttcac acagggttgc cattaattcg gtttctaaat
    14221 gcagagctgc tttgattttc cacgtccaag caatcacttg ctcacgccat ttatctgctg
    14281 gttgattatt aaaaatcacg cccaaatgct cacgaataat ttcttcacaa tggctggatt
    14341 ttgtgccttc ttctgcagtc ggatcggcat ttaatgaaag tgataacacc ccttcatttc
    14401 gcccacggaa catcgccaaa gcacggtggg aaggcacgct gttaaacggc tcgctatgag
    14461 caaaataatc acggaatttc tcgccctctt cctctttgcc gtcaatcact ttcgattcca
    14521 acgtggcgta agcggtcaaa tattggcgaa gttttgcaag tagctcagca tcttcgctaa
    14581 aacgctccat taaaatatat cttgccccgt ctaatgcggc cttggtatcc gcaacgcctt
    14641 tttccgcatc aacaaagttt gccgctaagg tttcaggatc ttgtttcgga tcattccata
    14701 aactgtccgc caatggctct aaccctgctt caatcgcaat ttgccctctg gtgcgacgtt
    14761 ttggtttata cggcaaatag agatcttcca gctcggtctt gctttcactg cttagaattt
    14821 tggcttttaa ttcatcggtt aatttgcctt gttcttcaat cgacttcaaa atggtttggc
    14881 ggcgttcgtc catttcacgc aaataaatta agcgggtttc aaaatggcga agttgggtgt
    14941 cgtctagccc gccggtcact tctttacggt aacgagcaat aaatggaatg gtattgccct
    15001 cacctaatag cgtgatggct gcaagaattt ggtgtgagcc aacgttgagt tcgccggcaa
    15061 taatttggct gatttttaga tttaagtcag tcattagttt tccttcaata aatttgctcg
    15121 aggtttatcc aatttctcaa gctcggtcaa tgtttcggca attttttgca gattcggctc
    15181 ttttttcgca cataacacca tattttctaa gctatccgct tggtgatagt agggtgcttt
    15241 gcttttgaca gcctgctcaa attgctgata agcctgttga aattgaccct gtttacataa
    15301 aaaagtgccg taattattca gcacatcagg gcggttttga ctcaatttca gtgccgtttg
    15361 gtaggctttt tcggcatttt cagcatcacc tgtttgttgg taataatagg caagcaccga
    15421 ataagggagg taatcttttt catcgtgagc caaggcttta tcaatattct gcttagcttt
    15481 tgggaaatca ttttgctcca gataagctaa agccaaatta atacgggctt ttaccgcttc
    15541 cgagcggtta aattcgactt cagaggaaga agggggaaga gaagaacaag ccgctaataa
    15601 aaaaatcaga atacaagcgg tcatttttgg aaaaaatttt gcaaacataa cgttctccta
    15661 caacaaaggg cttaatttta ctgttccatc ctcgctaaga ctagcgattt tttgcgaaga
    15721 agaaaaattt ttcgttttca tttttcgacg cagatcgcaa aaataataat ggggtgttgt
    15781 gctagggtaa atggtaggaa tacactctct atttaatata agaatttcat tgaaaaaact
    15841 tataaaactt ataaaataga ggcaaaaatg aaaatagtgg tattccagcg taaagcctta
    15901 aagcaattac gaaaaatccc aactggtgca gaaattcgcc gaaaatgtga tgatttagct
    15961 tactttccct actgtgccaa tattaaggca ttaacaaatc atcaatatga ttatcgcttt
    16021 cgggtcggaa attaccgtat ttttttcaat attgaaggcg aaacgatgaa tattgtgtct
    16081 atcgaagagg ttaaaaaacg agatgaaaga acttactaat attcaatatt taaataatga
    16141 agaaggaaaa cctgcctttg ccgtacttcc gatagcaaca cttgaatggc ttaagcagaa
    16201 agcaaatatt aaaaccgcaa tagagaccgg tattccatct gctgttgctg gaattgcatt
    16261 agataataac tactcagctc tgcgtgcttg gcgggaatat ttaggtttaa ctcaagaaga
    16321 ggtggcacaa cgcttgggga tttcgcaatc agcttatagc caacacgaaa atgcaaaaaa
    16381 tctacgaaaa acgacccgca taaaaattgc ctatgcgttg ggtttaaatg aagagcaatt
    16441 agatttctaa taacaaaaag gcaggaacct ctgccttttc actattcaga ttaatgggtt
    16501 ttaaccgcaa taccttgccc gaatttacgt ttttcaaggg tgcgtttggt gcggtcaatc
    16561 acatcgccag caagctgtcc gcaagcggca tcaatatcat cacctcgtgt tttacgcact
    16621 gttaccgtga aaccgtactc catcaaggtt ttttggaaac gatctacccg agagttagag
    16681 cttttaccat aaggagcttc tgggaacggg ttccacggaa tcaagttaat tttacacggc
    16741 gtgtttttta atacttcagc aagttggtgg gcgtggtttg tgctgtcatt gacatgatct
    16801 aacatcacat attcaatcgt gaccttgccg tggttggcgt tagaaacttc acggtattta
    16861 ttcaccgaat ccatcaacat tttgatgttg tactttttat taatcggcac taattcatca
    16921 cgcagttcat cgttcggagc gtgaagtgaa attgccaacg ccacatcaat ttgctcacgc
    16981 attttgtcta atgccggcac cacacccgaa gtggaaagcg tgacacgacg tttagataag
    17041 ccgtaagcaa aatcatctaa catgatttcc attgccggaa tcacgttatt catattcagc
    17101 aatggttcac ccattcccat catgaccaca ttggtaatcg ggcgaacacc ggtcacgcca
    17161 aaattgccga taattttaga agcacgccac acttgcccga taatttccgc cacgcttaag
    17221 ttacggttaa agccttgttg agcggttgag cagaaggtac aagccaaggc acagcctact
    17281 tgtgaagaaa cacacagggt tgcacggtca tcttcaggaa tatataccgt ctcgatttgc
    17341 tgatcgccca cttgcattgc ccatttaatc gtaccgtctg cagaacgttg ttctaccgcc
    17401 acttcagggg ctttaatttc ggcaatacgc tttaattttt cacgcaatac tttattgata
    17461 ttgctcatat tatcgaaatt ttcttcgcca aaatggtaga tccatttcat tagctggtcg
    17521 gcacggaaag gtttttcccc catttctgca aacagttctc gcatttcttg acgattaaga
    17581 tttaataaat tgattttttc ttttggttgt tcagcagacc cacagcctgc attggtaatc
    17641 agttctgaca taaagttgaa agcctcgtta ttacacggat tacggcaaaa ggttagggca
    17701 aatgccctta ttttgcgatt ggattttaaa gcgtgcaatt ttactggctc ttgagggatt
    17761 aggctagtaa tttttaatca aaagagttga attgcctgag taaacttatc aagaataacc
    17821 ttataaaaac aagactattt acatcattcc caatgttcta tagaatagct ttcgataatt
    17881 ctcattctca ataacaaaag gaggctaaaa atgaaactat caacaattaa aaaagcattg
    17941 gtattaacct ttggtttaag tgcagcgatg gcaatggcag agccgtttaa agtagttacc
    18001 acttttaccg tgattcaaga tattgcacaa aatgtcgccg gcgataaagc cactgtggaa
    18061 tccattacta aaccgggtgc tgaaattcac gattatcaac caacaccaaa agacattgta
    18121 aaagctcaaa aggcagactt agtgttatgg aacggtatga accttgagcg ttggtttgaa
    18181 cgtttctttg aaaatgtaaa aggtaaaccg gcggttgtcg tcaccgaagg catcacccca
    18241 atgccgatta ccgaaggtga atataaaaat ctaccaaatc cgcacgcttg gatgtccacc
    18301 gataacgcat taatttacat tgaaaatatt cgtgcggctt tagtaaaata tgacccacaa
    18361 aacgcagaca cctataatgc caatgcaaaa gcctatgctg aaaaagtaaa aggtattgct
    18421 gagccactcc gccaacgttt agcttttatt cctgagcagc aacgttggtt agtaaccagt
    18481 gaaggggcat ttagctattt agcgaaagac tacaacttaa aagaacttta tttatgggca
    18541 atcaatgcgg aagagcaagg ttcgccaaaa caagtgaaaa aagtgattga tggtgtaaaa
    18601 gccaacaaaa tccctgttgt gtttagcgaa agtaccgttt ccgacaaacc ggcaaaacaa
    18661 gtggcgaaag aaaccggtgc attatacggt ggcgtaattt atgtggattc actttcagag
    18721 aaagatggtc cggttccaac ctatttagat ttgcttaaag tgactatcgg caccattgtc
    18781 gaagggttcg aacgaagcaa aaaataataa gatttagcaa tgacaactgt ttcagcctcc
    18841 atttccgtcg aaaatttatc ggtccgttat aataacggac atatcgcttt gcaagatgtc
    18901 tcgtttcatc tggaaaacgg cacaatttgt gcattaatcg gcgtgaatgg aggtggaaaa
    18961 tccactctgt ttaaaagttt aatggggctg gttaagccat taaccggctc tgttaagctg
    19021 agtcagctcc cgattgctaa agccctcaaa caaaatttgg tttcctatgt gccacaaagt
    19081 gaagaagtgg actggcaatt tccagtttcg gtttacgatg tggtaatgat ggggcgatac
    19141 ggctatatga attttctacg ccgcccaagc caaaccgata agctcaaagt agagcaagca
    19201 atgcaacgcc ttgatgtttt acatctcaaa gacaggcaaa tcggcgaact ttccggcggg
    19261 caaaaaaaac gggtattttt agcccgtgcc ttagctcaag aaagtaaaat catcttactt
    19321 gatgagcctt tcaccggtgt ggatgttaaa accgaaaatg cgattgttga gctacttaaa
    19381 cagcttaaaa atgaggggca tttgatttta gtttccaccc acaaccttgc cagcgtacca
    19441 agcttttgcg atcaggtttt gatggtcaat cgcacgctac tggcaaaagg taaaacggaa
    19501 gaaatcttta ataatcaaaa tttagaacgg gtgttcggcg gtttattgca ttatcaaaag
    19561 tagtgtttca gcaacaaatc acaaacaaat agggaggcaa atgcctccct atttttgtat
    19621 caatgaatct tagaatatgc aaaactgagg aaaaaaatgg ccgcttgcac gagaataatc
    19681 gtcggccctg ttgcggcatc aatatggtag ctaagcaacg tgccgaatac cgatgaaaat
    19741 atcgcaacgc ctaaggcaat cagtaacata ctatcaaacc gcttagtcag caggtaagca
    19801 gtgatccccg gggtaatcaa cattgccacc actaaaatca cgcccaccac ttgcattgca
    19861 ctgataatag ttaaagcaag caaggaaagt aaaccataat gcaataatct aaccggtaag
    19921 cctgctactt tggcttgatt aacatcaaag caatagagca agaagtcttt gcgtttcgcc
    19981 accatcacca caaaggtaaa gaggcttatg agtaaagtct gaagcaaatc gcttttggtt
    20041 acgcctaata gattaccaaa taaaatatgg gttaaatgct caccggtatt aaaggcggta
    20101 aacagcaaga tcccaaaggc aaacatacct gaaaacacaa tccccattac cgtgtcttct
    20161 ttcaagcgac tattttcttt taaatagccc accgataagg cacagcctaa tcctgaaaaa
    20221 aacgccccta ttgagagtgg taacccggca agtgaggaaa tcaccacacc gggcagaaca
    20281 gcgtgcgaaa ttgcatcgcc cattaaagac cagcctttca gcaccagata gcaagataaa
    20341 accgcactca cgccagcaac taaaattgcg gtaattaacg caatttgcat aaattcaaat
    20401 tgcaacggct ctaaaatcca attaagcatt ttgaacctcc acacggtgca atttccgctt
    20461 ttgagtaatc aagccatatt taggagcaaa gcagaatgcg aataagaaaa ttaaggtttg
    20521 taagcacaca attaccgcac cggttgcacc gtctaaaaag tagcttaaat atgccccaat
    20581 ccctgatgtc agcgtgccga taagcattgc gatcagcact aatctaggga aacggtcggt
    20641 aagtaaataa gcagttgctc ccggcgtgac gaccatcgca ataaccaaaa ttgccccaac
    20701 cgtttgcaga gccactacta cacaggcact taataaggta aagaaaatca ctttatagcg
    20761 taatggcgaa agcccgactg acaatgcgtg gtgttcgtca aaaaagacga gtagcaaatc
    20821 cttccaaaat aggattaaac ccagtaacga aatcgcaata atcagtacca cctgccacaa
    20881 gtcatcatca gcaatgccta aaatatttcc cattacaatc gaattaacat caaccgatgt
    20941 tggattgagg gaaacaataa acataccaag cgcaaaaaaa gtcgtgaaaa taaagccgat
    21001 aaccgcatct tctttaattt tcgtcaggct ttttacccaa agaatcgata atgccgccaa
    21061 aatcccggaa aaaaacgcac caaaggcgta gggcaatttt agtgcataag cgatggcaac
    21121 acctggcact acagcgtgtg ataaggcatc accaatcaaa gaccagcctt ttaacatcaa
    21181 aaaggcggaa agaaaagcac aaactaaccc cacgcccata ctgacaaaaa tcgctttttg
    21241 catatagttg taggtaaaag gctctaataa aagatcaagc ataaaatcct aacaagttgt
    21301 tgataata
//
LOCUS       DANLXO010000035        20877 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.035, whole genome shotgun sequence.
ACCESSION   DANLXO010000035 DANLXO010000000
VERSION     DANLXO010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20877
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.035"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(40..2001)
                     /gene="recD"
                     /locus_tag="PXD69_001114"
     CDS             complement(40..2001)
                     /gene="recD"
                     /locus_tag="PXD69_001114"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HDL6283323.1"
                     /translation="MLNLLLELKQEKAISDLNYQFARFIDNKQKPYGYSPLEQDLAVL
                     AAALVSYQVGLGHTALRLENLSLSSLFELNSKPQTYHLLEQILQKIEQIPPLEWQSVL
                     KNHIAFSYSPETIKPMLFQNSLLYFYRYWQAEHRIAGYLQQAVDFSEKFANTELNQSI
                     LNQLFTGKAQTIDWQKIAVATALEKQFSLISGGPGTGKTTTVVKLLLGLQLKQQALQK
                     PYLQIALAAPTGKAAARMKESLESKLAEEKGLSEELKRSIPTEAVTIHRLLGARPLTE
                     KTKYHTKNPWHYDLVVLDEASMIDLSMMEKVVQALKPNSRLIMLGDKDQLASVEAGSI
                     MGELGSFIDNGYSQSHCDYLKAVTDYQIEAGNALPIGDCLSHLKHSYRFGEKAWIGEL
                     ANAVNDQKINLSWEIFDKYKNSDKLENFCYPETKETTDKSSWIEKSVQMVVDKAVELY
                     RDYLQAVQKREKNPDSVSVKAIFEKFQKVRILSALRVSELGVERLNMAIAEGLRKASL
                     VKFNHSRDRYIGKPILMTENMPINSIASGDVGIILPDENGESRVYFDSLQENREHHSL
                     PLGRVSNYEAAYIMTVHKSQGSEFEHTVLVLPHSISPVLTKELIYTAITRAKDKFTLF
                     GSEKVWKYSVGAKTERQSGLKEQIRGKFS"
     gene            2131..3255
                     /gene="alr"
                     /locus_tag="PXD69_001115"
     CDS             2131..3255
                     /gene="alr"
                     /locus_tag="PXD69_001115"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDL6283324.1"
                     /translation="MKPATATIDSQALRHNIRLIKSFAPQQKLLAMIKANAYGQGLLP
                     AAGTLADMVDGFGVARLREALEIQETGYTGKIVLVEGFFDREELLKTLSRKFDTVIHN
                     LEQLELLEQVAKEWQAEQQKGFWTRKAKIYFPINIWLKIDTGMHRLGIHPEQVDHFVE
                     RLKNCALVNSISFVSHFSRADELDCGYTEKQIAVFEQATQKYQDHDRSISASSGILYW
                     KQAHYDWVRPGIIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWV
                     SPKDTKLGVTAMGYGDGYPRNAPEGTPVLINGRIVPIVGRVSMDMLTVDLGAESQDKV
                     GDKAIFWGEQLLIEDVAKHIGVISYELITKLTPRVIFEYK"
     gene            complement(3318..3959)
                     /gene="sodA"
                     /locus_tag="PXD69_001116"
     CDS             complement(3318..3959)
                     /gene="sodA"
                     /locus_tag="PXD69_001116"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HDL6283325.1"
                     /translation="MAYTLPELGYAYDALEPHFDAKTMEIHHSKHHQAYINNANAALE
                     AHPELLEKCPGALIKDLSQVPAEKRIAVRNNVGGHVNHTLFWKGLKTGTTLQGALKEA
                     IERDFGSVEAFQSEFEKAATTRVGSGWAWLVLEEGKLAVVSTANQDNPLMGKEVAGVS
                     GYPILVLDVWEHAYYLNYQNRRPDFIKAFWNVVNWDEAARRFEEKVATCGCAK"
     gene            4403..6859
                     /gene="thrA"
                     /locus_tag="PXD69_001117"
     CDS             4403..6859
                     /gene="thrA"
                     /locus_tag="PXD69_001117"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HDL6283326.1"
                     /translation="MRVLKFGGTSLANPERFMQAAEIIEKAHLADQAAGVLSAPAKIT
                     NHLVAIVDKAIAGESFQSNLSEATEIFHNIINGLYATNNHFAKEALLALVEAELNQIQ
                     QVAAEAAQTKSLSDKIAATIHCRGEKLSIAMMQAWFEAKGYEVTRIDPVEKLLAHGSY
                     LESSVDIAESTKRVDAGSIPKKNIVLMAGFTAGNEQGELVLLGRNGSDYSAACLAACL
                     KADVCEIWTDVDGVYTCDPRLVPDAVCLETMSYQEAMELSYFGAKVIHPRTIGPLVPL
                     NIPCLIKNTGNPDGKGTLIDGNVANDNLKVKGITNLDNVAMFNVSGSGMQGMVGMAAR
                     VFSTMSKAGISVILITQSSSEYSISFCVPAKSAEKALAALNTEFAQELSENLLDPIDI
                     IKDLSIVSVVGDGMRTAKGIAARFFSALAQANISIVAIAQGSSERSISAVVPLNKAIE
                     AVKATHKSLFNSKRVVDMFLVGVGGVGSELIEQVKQQKEFLAKKDIEIRVCALANSDK
                     MLLNENGLNLDNWKEDLEKAIQPSDFDVLLSFIKFHHVVNPVFVDCTSAQSVANLYAR
                     ALKEGFHVVTPNKKANTSGYDYYLEMRENARQSQHKFLYETNVGAGLPVIENLQNLLA
                     AGDEVEKFEGILSGSLSFIFGKLEEGLTLSQATLIAKEKGFTEPDPRDDLSGADVARK
                     LLILVRETGLPLEFEDIEIEGVLPKGFSEGMSRDEFLQALPSLDEEFSKRVEAAKAEG
                     KVLRYVGSITGDKCRVAIEAVDENHPLYKVKDGENALAFLTRYYNPIPLLLRGYGAGN
                     SVTAAGIFADILRTLQGGVN"
     gene            6859..7806
                     /gene="thrB"
                     /locus_tag="PXD69_001118"
     CDS             6859..7806
                     /gene="thrB"
                     /locus_tag="PXD69_001118"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDL6283327.1"
                     /translation="MALRIYAPASSANISVGFDSLGAAISPIDGSLLGDVVQIEESEQ
                     QFELESAGYFVRKLPKEPQKNIVYQAYVLFSERLKLRNGSVKNLRLTLEKNMPIGSGL
                     GSSACSIVAALVALNKFHDEPFSKMELLEMMGELEGRISGSIHYDNVAPCYLGGLQLM
                     TQSLGNICQPLPFFDEWYWVLAYPGVEVSTAEARAILPKSYTRQDMIQQARYLGSFVH
                     ACHTHQDILAATMMKDLIAEPYREDLLPNFPAVRQGCKDLGALAVGISGSGPTMFAIA
                     PDLEHAQRLVSYLEKEYLQNNEGFIHICKVDNQGARELK"
     gene            complement(7921..9297)
                     /gene="cysS"
                     /locus_tag="PXD69_001119"
     CDS             complement(7921..9297)
                     /gene="cysS"
                     /locus_tag="PXD69_001119"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDL6283328.1"
                     /translation="MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTF
                     VSFDVIARYLRYSGYNLRYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDA
                     LNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNL
                     EQLQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELG
                     EHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFS
                     IRHMLGLYDAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIG
                     EHYVEAFKTAMDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGL
                     LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTP
                     NGTIWRKA"
     gene            9453..9962
                     /locus_tag="PXD69_001120"
     CDS             9453..9962
                     /locus_tag="PXD69_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6283329.1"
                     /translation="MITLHTNFGDIKIELNFEKAPITAKNFEDYAKEGFYNGTIFHRV
                     IDGFMIQGGGMTAGMAEKPTKDPIQNEANNGLSNKRGTIAMARTSDPHSASSQFFINV
                     ADNTFLDYRSKEMFGRSVVQDWGYAVFGEVVEGMDVVDKIKGVKTGNKGFHQDVPVED
                     VVIESVSVA"
     gene            complement(10054..10983)
                     /locus_tag="PXD69_001121"
     CDS             complement(10054..10983)
                     /locus_tag="PXD69_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL6283330.1"
                     /translation="MEIALLLADKILQLTLMVLLGYLIVKTKLLKSEHSYPISVIGLY
                     IISPAMLITAFQVDYTTEILNGLYLAFLISVLLNGLLILLGWLLKRALKLDNIEQATA
                     IYSNSGNLIIPIVASLFGNEWVIYSTAFIVVQNVLFWSHLRLLICGKGNVPFRKMIFN
                     INIIAIVIGMMLFLLHIKLPATLANTLSTLGHMLGPLAMLVAGMLIAAIPFKEIITDK
                     RIYLVAFLRLIFIPLILLAVIKLGGFASWIENGKTVVMITFLATISPSAATATQMAVA
                     YGQDAKKASAIYGVTTLLCVFTMPLIIWLYQFL"
     gene            complement(10986..11780)
                     /gene="fdhD"
                     /locus_tag="PXD69_001122"
     CDS             complement(10986..11780)
                     /gene="fdhD"
                     /locus_tag="PXD69_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDL6283331.1"
                     /translation="MNAKKLSLSTNSIKQKDDEENLISEVPVALVYNGISHTVMMATP
                     ANLEDFALGFSLAEGILNAPSELYGLDVIEQENGVEIQLEISSRQFVALKDKRRSMAG
                     RTGCGICGVEQLEQVNQSCKIVKKNNRLQNVNPLILEDCLLQLENAQFLSKETGASHA
                     AAFFTPDGKLLAIREDVGRHVALDKLIGWYAKADFPIGFVFVTSRASFEMVQKCLAVG
                     IEMLCAISATTEMAVNMARENQFTLLAFARKGKATIYAGEERLALN"
     gene            12034..15105
                     /gene="fdnG"
                     /locus_tag="PXD69_001123"
     CDS             12034..15105
                     /gene="fdnG"
                     /locus_tag="PXD69_001123"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:12619..12621,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDL6283332.1"
                     /translation="MQISRRKFFKVCAGGMAGTSAAMLGFAPATALAAPREYKLLRAK
                     ETRQTCTYCAVGCGMIMYSLGGEAMNSKGKLIHIEGDSDHPVSRGALCPKGAGALDYV
                     NSDRRVHYPEVREAGSSEWKRISWHEAIERIARHMKNDRDENFVTHNEAGLEVNRWMT
                     AGFLAGSACSNETGIVTQKFIRSLGMIFTDNQASIUHGPTVASLAPSFGRGAMTNHWV
                     DIKNSDLVIVMGGNAAEAHPVGFRWAVEAKKQNGAKLMVVDPRFNRSAAVADIYIPLR
                     PGTDIAFLLGAVNYLLKNDKIQHEYVKHYTNATFLLNEGFKFEDGLFTGYDEATRTYK
                     DKSTWAYQLDEQGQPKRDMTMQDPRCVINMLKDHVSRYTPEMVERITGTPQKDFLIFC
                     EEIAKTSAPDKAATFLYALGWTQHTVGAQNIRSMAIIQLLCGNIGVSGGGVNALRGHS
                     NVQGITDLGLFPHMLPGYIRLPTEADATLESYLNAIAPKTLVAGQVNYGQNNPKFAVS
                     MLKTFYGDKATKENEFGYHYLPKYPKGGTDHFRFIEQMYQGKVNGYFCQGMNPIASYP
                     NSQKLIKALSNLKYLVIFDPLITDTSEFWKNHGEFNNVNPSEIQTEVFRLPTTCFAEE
                     DGSIANSGRWLQWHWKAADAPHEAKPDVDILSEIRAELIHLYHKEGGKAPLEPLEAMT
                     WNYMNPLEPKPEEIAKENNGYALEDLKDADGNIIVKKGELLSSFTQMRDDGTTSGGCW
                     IYCGQWTPKGNQMANRDNSDPSGLGNTLGWAFSWPVNRRILYNRASADLSGKPWNPKR
                     QLVKWNGKNWNYVDVADYGTAPPNSPVTPFIMQPEGVSGLFVRERMQDGPFPEHYEPF
                     ETPIGTNPLHPNVISSPVARILPSDKEDLGTSDEFPYVGTTYRLTEHFHYWTKNALIN
                     VIAQPEQFVEIGEKLAEEKGIKNGDKVRVWSKRGEIKAVAVVTKRIRSLVSDGKPIHT
                     IGVPIHWGFAATTGAKKGYFANNLTVRTGEPNSNTPESKCMLLNIEKIVGA"
     gene            15108..16022
                     /gene="fdxH"
                     /locus_tag="PXD69_001124"
     CDS             15108..16022
                     /gene="fdxH"
                     /locus_tag="PXD69_001124"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HDL6283333.1"
                     /translation="MSTVQTQNIIKISATSALTPAPQARSHQVEVAKLIDVTTCIGCK
                     ACQVGCSEWNDIRSDVNANCVGVYDNPADLNAKAWTVMRFNEVEENDRLEWLIRKDGC
                     MHCAEPGCLKSCPSPGAIIQYANGIVDFQSDKCIGCGYCIAGCPFNIPRMNPDDNRVY
                     KCTLCVDRVNVGQEPACVKTCPTGAIRFGSKEEMKFYAEQRIADLKSRGYENAGLYDP
                     EGVGGTHVMYVLHHADKPELYSGLPKDPKIDTTVTLWKDVLKPVAAVALGGLALAEVA
                     HYITVGPNVEEDLEEHHHSENAEGGKHE"
     gene            16015..16692
                     /locus_tag="PXD69_001125"
     CDS             16015..16692
                     /locus_tag="PXD69_001125"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDL6283334.1"
                     /translation="MSKKFEITNDTKIVRHKPLARVSHWFLVISFFMTMFTGVAFFFP
                     DFAWLTEILGTPQIARAVHPFTGIIMFIAFIIMALIYWHHNIPEKNDIRWAKGIVEVL
                     KGNEHKVSDNGKYNLGQKLLFWTLILAMFTLLATGIIMWRQFFSHYFSIPMLRIAILL
                     HSASAFMLFTGILVHMYMAFWVKGSIRGMVEGWVTVRWAKKHHPRWYREEVLPELERQ
                     VAEQNNK"
     gene            16748..17665
                     /gene="fdhE"
                     /locus_tag="PXD69_001126"
     CDS             16748..17665
                     /gene="fdhE"
                     /locus_tag="PXD69_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HDL6283335.1"
                     /translation="MSIKILPQDDIKQAASSFQQPELLFANPKNLYLRRAKRLRELAK
                     QNPFGEYMEFSANLVDIQLALLESQPIADYSQKITACVERTQGETPLNAQNFQRTDEW
                     RTLLLAIIEKFKPYANDTVLATIEVLEKAAKSELDTLADNLLNERYELVGADKAVFIW
                     AALSLYWVQLAQQLPRNSRAEIGHKHLCPVCNSAPVSSVIHFGEAQGLRYLHCSLCES
                     EWHVVRTKCTNCDETGKLDYWSLDTVEAAVKAESCGDCHSYLKVLYQDKDVNVEPVAD
                     DLATLFLDSEMEQKGLSRSGINPFLFQVE"
     gene            complement(17735..18121)
                     /locus_tag="PXD69_001127"
     CDS             complement(17735..18121)
                     /locus_tag="PXD69_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283336.1"
                     /translation="MLRNFMIMLHFIYGFAMKNAFSFFVISLFLTMNSISYASNPIPS
                     NKEKLNGVKKQQDKPKFRISERKVLKNKEKDEEVSNFSMEELRVGAQRPLDDSVIQYF
                     KSQCRYAFMSDREIIANRCEVKKIAD"
     gene            complement(18132..19502)
                     /gene="gorA"
                     /locus_tag="PXD69_001128"
     CDS             complement(18132..19502)
                     /gene="gorA"
                     /locus_tag="PXD69_001128"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HDL6283337.1"
                     /translation="MAKHYDYIAIGGGSGGIASINRAASYGQKCAIIEAKHLGGTCVN
                     VGCVPKKVMFYGAQVAEAINHYAPDYGFDITVNNFDYAKLVESRQAYIGRIHTSYGNV
                     LAKNNVDVLNGFARFKDAKTLEVSYADGSVEEVTADHILIATGGRPTVPNVKGAEYGI
                     TSDGVFALDALPKSVAIVGAGYIAVELAGVFNSLGVNTHLFVRQHAPMRNQDPLIVDT
                     LLEVLAQDGIELHTQATPQEVVKNADGSLTLKLQDGRETSVESLVWAIGREPATDKIN
                     LEAAGVETNERGFIKVDKFQNTNVPNIYAVGDIIEGGIELTPVAVAAGRRLSERLFNN
                     KPNEHLDYSLVPTVVFSHPPIGTVGLSEPKAIEQYGAENVKVYKSSFTAMYTAVTQHR
                     QPCRMKLVCVGEGEKVVGLHGIGFGVDEMIQGFAVAIKMGATKADFDNTVAIHPTGSE
                     EFVTMR"
     gene            complement(19579..20103)
                     /locus_tag="PXD69_001129"
     CDS             complement(19579..20103)
                     /locus_tag="PXD69_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HDL6283338.1"
                     /translation="MHSELNTRANILGKIIFASRWLQLPIYLGLIVVQGIYAYKFIKS
                     LYHLVINLNEMDSNTVMLAVLNLIDVVMIANLLVMVIVGGYETFVSRLKVDDHPDQPE
                     WLDHVNATILKVKLSMAIISISSIHLLQTFINASNLDEKQMMWQVVIHLAFIVSALAM
                     AYIDKMLNSGHMKH"
     gene            complement(20198..20836)
                     /locus_tag="PXD69_001130"
     CDS             complement(20198..20836)
                     /locus_tag="PXD69_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL6283339.1"
                     /translation="MELKHTIEQRKTIKAFNSTIKISRTELEEMVALSQLAPSKANLQ
                     PWRFVIIDVEILKAALSKNVAFNGPPCETASAIVVILADLQYEKLLGAIVDQSVETGC
                     LHKEFRERKFDFLLNLHNQATQAEIRDQVLIDTSLAAMQLMLIAKDKGYDTHAIGVFE
                     RPAVLKLLNIDAERYLPVMLLAIGKAANPALPSCRLPLEYTVSWNDGQGFKI"
BASE COUNT         6193 a         4462 c         4209 g         6013 t
ORIGIN      
        1 tgaccgcttg cgtattttta cggcaaaacg agtattaatt tagctaaact tgcctcttat
       61 ttgttctttt agcccacttt gtctttcggt tttggcacca acactgtatt tccaaacttt
      121 ttcgctacca aataaggtaa atttatcttt tgcccttgtg attgcggtgt aaatcaactc
      181 tttcgtcagc accggggaaa tcgaatgggg caacaccaat accgtatgtt caaattcaga
      241 accttgcgat ttatgcacag tcataatata agctgcttca taatttgaaa ccctacctag
      301 aggcaaacta tggtgttctc tattttcctg taaggaatca aaataaactc ggctttctcc
      361 attttcgtcc ggcaaaatga tgccgacatc accgctggct atgctattta tcggcatatt
      421 ttctgtcatt aaaatcggtt ttccgatata gcggtctcgg ctatgattaa atttcactaa
      481 gctagctttc cgcaagcctt ccgcaatcgc catattaaga cgttcaaccc ccagttcact
      541 tacccttaag gctgataaaa ttcggacttt ttgaaatttc tcaaaaatcg ctttcacact
      601 cactgaatct ggatttttct cccgtttttg aaccgcttgt aaataatcac gataaagttc
      661 aaccgcttta tccaccacca tttgcacact tttttcaatc cagcttgatt tatccgttgt
      721 ctctttcgtt tccggataac agaaattttc taacttatca ctgtttttat atttgtcgaa
      781 aatctcccac gaaaggttaa ttttttgatc atttactgca tttgcaagct ctccaatcca
      841 ggctttttcg ccaaatcgat agctatgttt taagtgagat aaacaatcac caatcggcaa
      901 cgcattaccg gcttcaattt ggtagtcggt aacggctttt aagtaatcgc aatgggattg
      961 gctataacca ttatcaataa aagagccaag ttcccccata attgaaccag cttccacaga
     1021 agcaagctga tctttatctc ccagcattat caagcgagag tttggtttga gcgcttgaac
     1081 aactttctcc atcattgata aatcaatcat tgaagcctca tctaatacga ccaaatcata
     1141 gtgccacgga tttttggtat gatatttggt tttctcagtt aatggtctcg caccaagcaa
     1201 gcgatgaata gtcactgctt cagttggaat agagcgtttt aactcctcag ataacccctt
     1261 ttcttccgcc aacttgcttt ccagcgactc tttcattctt gctgctgctt ttccggttgg
     1321 tgcagccaga gcgatttgca aatatggttt ctgtagtgct tgctgtttta attgcagccc
     1381 gagtaataat tttactaccg tagttgtttt tccggttccc ggcccacctg aaattaagct
     1441 aaactgcttt tctaatgctg ttgcaacggc aatcttttgc cagtcgatag tttgagcttt
     1501 cccagtgaat agttggttga gaatgctttg gtttaattcg gtatttgcaa atttttccga
     1561 aaaatcaacc gcttgttgta aataaccggc aatgcgatgc tccgcttgcc agtagcgata
     1621 aaaatagagc aagctgtttt ggaataacat cggtttaatt gtttcgggag aatagctaaa
     1681 agcgatatga tttttcagca cactctgcca ttcaagcggt ggaatttgct caattttttg
     1741 caaaatttgt tcgagcaaat gataagtttg tggcttgcta tttaattcaa aaagagaaga
     1801 aagactgaga ttttccaaac gtaatgccgt atgcccaagt cccacttggt aagaaaccaa
     1861 cgcagcggct aacacagcta aatcttgctc caaaggcgaa tacccatagg gtttctgctt
     1921 attatcaata aaacgggcaa attgataatt taagtcagaa atcgcctttt cttgtttaag
     1981 ttccaataat aaattcagca taatcaaacc ttaaatcgac cacctaacat taagtgataa
     2041 tactaatctt ttttgcatta ttttctaagg gattttttat tttaggcgta taatttagcc
     2101 tttcttgtga ttttaactat gtagataagt atgaaaccag caacagcaac cattgatagt
     2161 caagccctcc gccataatat tcgcctgatc aaatctttcg ctccacagca aaaattattg
     2221 gcgatgatca aagccaatgc ttacgggcaa ggcttattgc cggctgccgg cacattagca
     2281 gatatggttg atggctttgg agttgcccgt ttgcgtgaag ccttagaaat tcaagaaacc
     2341 ggatacacag gcaaaattgt gttagttgaa ggtttttttg accgagaaga gctactcaaa
     2401 accctttccc gcaagtttga taccgtcatt cataacctcg aacaactgga attactcgag
     2461 caagtagcaa aagaatggca ggcagagcaa caaaaaggct tttggactcg taaagcgaaa
     2521 atctacttcc cgattaacat ttggctaaaa atcgacaccg gaatgcaccg cttaggcatt
     2581 cacccggagc aagtcgatca ctttgttgaa cgtttgaaaa attgtgcctt ggtcaattca
     2641 atcagctttg tgagtcattt tagccgtgcc gatgaactcg attgtggcta taccgaaaaa
     2701 caaattgcgg tgtttgagca agctacgcaa aaatatcagg atcacgaccg cagtatttcc
     2761 gcctcaagcg gtattcttta ttggaaacag gctcattatg attgggttcg cccgggtatt
     2821 attatgcacg gcatttctcc ccactatacg ccgattaccg atttaggttt taagccggta
     2881 atgacgctct cctcttccct gatcgctgtg cgtacccata aagccggcga gcctgtaggc
     2941 tatggtggtg cttgggtaag ccctaaagat accaaactcg gcgtgactgc aatgggctac
     3001 ggcgatggct accctcgcaa tgctcctgaa ggtacccctg tgttgattaa cggtagaata
     3061 gtgccgattg tcggtcgagt ttcgatggat atgctgacgg tcgatttagg tgcagagagc
     3121 caagataaag tgggcgataa agccattttt tggggagagc aactattaat tgaagatgtg
     3181 gcgaaacaca ttggcgtgat tagctatgag ctgattacta aactcactcc tcgtgtgatt
     3241 tttgaatata aatagacaac aagcggtaaa attttcaaca aattttaccg cttgtatctt
     3301 attcaagatc gaaaatatta tttcgcacaa ccgcaggttg ctactttttc ttcaaaacgg
     3361 cgagcggctt cgtcccagtt tacaacgttc cagaatgctt taatgaaatc cggacggcgg
     3421 ttttggtagt ttaagtagta agcgtgttcc caaacgtcta agactaaaat cggatagcct
     3481 gaaacgcctg ccacttcttt acccattagt gggttgtcct ggttagcggt tgaaacaacg
     3541 gctaatttac cctcttctaa tactaaccac gcccagcctg aaccaacacg agtagtcgct
     3601 gctttttcaa attctgattg gaaagcttca actgaaccga aatcacgctc aatcgcttct
     3661 tttaatgcac cttgtaaggt agtgcctgtt tttaaacctt tccagaataa agtgtggttt
     3721 acatgaccac ctacgttgtt acgcactgca atacgttttt ctgcaggcac ttggctcaaa
     3781 tctttgatta atgcacccgg acatttttct aataattcag ggtgagcttc taatgctgca
     3841 tttgcattgt tgatgtaagc ttggtgatgt ttagaatggt ggatttccat tgttttagca
     3901 tcgaaatgtg gctctaacgc atcataagcg tagcctaatt ctggtaatgt atatgccata
     3961 gttaattcct ctcaaatagt aaataggtta atcagagtta aactccgagt acattttatc
     4021 aagaaacaca caaaaaatgc acattttttt gatctagaac aaaattattt cactatctaa
     4081 tttagaaagg ttcctaatca aattcttgct tttaattgtt ttatatagaa agacaaagaa
     4141 atttaaaaaa atgtggtgaa aaacagcgtt aagcccattg acaaaggcat tattttcacg
     4201 cattcttgaa ccattattca ctctcttgac cgagattccg ccaatgaatt gttttaatat
     4261 gatgacaacg attattacca ccattatgtc accaacatag tgcgggtttt aattggctga
     4321 aataatgaaa gaataaaccg aaaacccgct acaagcgggt ttttttgtat aaaaatttac
     4381 aaataattta tcaggagtaa ctatgcgagt tcttaaattt ggaggcactt ctcttgccaa
     4441 ccctgaacgc tttatgcaag cggcagagat tatcgagaaa gctcatttgg cagatcaagc
     4501 tgccggcgta ttatccgccc cagccaaaat taccaatcat cttgtcgcta ttgtagataa
     4561 agcgattgcc ggtgaatcat ttcaatctaa cctttctgaa gctaccgaga ttttccacaa
     4621 catcattaac ggcttatatg ctacaaataa tcactttgct aaagaagcac tgttagcctt
     4681 agtggaagcg gaattaaacc aaattcagca agtggctgca gaagcagctc aaactaaatc
     4741 gttgtcagat aaaattgctg ccactattca ctgccgtggt gaaaaactct ctattgcgat
     4801 gatgcaagcg tggttcgagg caaaaggcta tgaagtcact cgtatcgacc ctgttgaaaa
     4861 attattggct cacggcagct atttggaatc ttcggtcgat attgccgaat ccaccaagcg
     4921 agttgatgca ggttcaattc caaagaaaaa tatcgtgcta atggctggtt ttaccgcagg
     4981 taatgagcaa ggcgaactgg tgttattagg gcgtaacggt tcagattatt ctgccgcttg
     5041 tttggcagcg tgtttaaaag ccgatgtttg tgaaatctgg acggacgtag atggcgttta
     5101 cacctgcgac cctcgtttgg tgcctgatgc agtatgctta gaaacaatga gctatcaaga
     5161 ggcaatggag ctttcctact ttggggcgaa agtgatccac cctcgcacca tcgggccatt
     5221 agtgccgctc aatattcctt gtttaatcaa aaataccggc aatccggacg gaaaaggcac
     5281 attaattgat ggcaatgtgg caaacgataa tctcaaagta aaagggatta ccaaccttga
     5341 taacgtggcg atgttcaacg tttcaggttc aggaatgcag ggaatggtgg gcatggctgc
     5401 ccgtgtgttc tcgacgatgt caaaagccgg tatttcggtg attttaatta cccaatcatc
     5461 atcagaatat agcatcagct tctgcgtgcc ggcaaaatcg gcagaaaaag cgttagcggc
     5521 tctaaatact gaatttgcac aagagttatc tgaaaactta cttgacccga ttgatattat
     5581 taaagattta tccattgttt cggtagtggg tgatggtatg cgtaccgcca aaggaattgc
     5641 ggctcgcttc ttctctgccc tagcccaagc caacatcagt attgtggcaa ttgcacaggg
     5701 ttcatctgag cgttccattt ctgctgtcgt gccgttaaac aaagcgattg aagcagtaaa
     5761 agcaactcac aaatcgctat ttaacagtaa acgtgtggtg gatatgtttt tagtgggtgt
     5821 aggcggtgtg ggtagcgaac tcatcgagca agtcaaacaa caaaaggagt ttttggcaaa
     5881 gaaggatatt gagatccgtg tgtgtgcttt agctaattca gataaaatgt tactcaacga
     5941 aaacggctta aatttagaca actggaaaga agatttagaa aaagcaattc agccgtcaga
     6001 ctttgatgta ttgctttctt tcatcaaatt ccaccacgtg gtaaacccag tatttgtaga
     6061 ttgcacttcg gcacaatcgg tggcgaacct gtacgcacga gccttaaaag agggcttcca
     6121 cgtggtaaca ccaaacaaaa aagccaatac atcaggttac gattactact tagaaatgcg
     6181 tgaaaacgcc cgccaaagcc agcacaaatt cctctacgaa actaatgtag gggcaggttt
     6241 accggtaatt gaaaacttac aaaacctatt agctgccggt gacgaagtag agaaatttga
     6301 agggatttta tccggctcgc tctctttcat tttcggcaaa ttagaagaag gtttaaccct
     6361 ttcgcaagca actttaatcg ccaaagaaaa aggctttacc gagccagatc cacgagatga
     6421 tttatccggt gcagatgttg ctcgtaaact cttaattctt gttcgtgaaa ccggcttacc
     6481 gcttgaattt gaagatattg aaattgaagg cgtattgcca aaaggcttct cggaaggaat
     6541 gagtcgtgat gagtttttac aagctctacc gtctttagac gaagaattca gcaagcgtgt
     6601 agaagctgcc aaggctgaag gcaaagtgtt gcgttatgtg ggctcgatca caggtgataa
     6661 atgccgagtt gccattgaag ccgtggacga aaaccaccca ctttacaaag ttaaagacgg
     6721 cgaaaatgcc cttgcttttc tcacacgtta ctacaaccct attccattat tattgcgtgg
     6781 gtatggtgcg ggcaatagcg taaccgctgc cggtatcttt gcagatattc tgcgtacttt
     6841 acaaggagga gtgaactaat ggcgttacga atttatgccc cagcttcaag tgcaaatatt
     6901 agtgtgggtt ttgactcatt aggcgctgca atctccccga ttgacggctc tttgctcggc
     6961 gatgtagttc aaattgaaga gagtgaacaa caatttgagc tagaaagtgc aggttatttt
     7021 gtacgtaaat tgcccaaaga accacaaaaa aacattgtct atcaagccta tgtgctattt
     7081 agcgaacgct tgaaattacg taacggcagt gtaaaaaatt tacgcttaac acttgaaaaa
     7141 aatatgccga ttggctcagg gctaggctca agtgcctgct cgattgttgc agcattagtg
     7201 gcactcaata aattccacga tgaaccgttc tccaaaatgg aattactgga aatgatgggc
     7261 gaattggaag gcagaatttc aggctcaatc cactacgaca acgttgcccc ttgctattta
     7321 ggtggcctgc aattaatgac acaatcgctc ggcaatattt gccaacctct gccattcttt
     7381 gatgaatggt attgggtgct tgcctacccg ggcgtggaag tatcaaccgc cgaagcccgt
     7441 gctattttgc cgaaaagcta tactcgtcaa gatatgattc agcaagcccg ctacttagga
     7501 tctttcgtcc atgcttgcca tacacatcaa gatatcttgg ctgctacaat gatgaaagac
     7561 ctaattgctg agccttaccg tgaagattta ctgccgaact ttccggctgt tcgtcaaggc
     7621 tgtaaagact taggtgcgtt agcggttggt atttcaggtt ccggtccgac aatgtttgcg
     7681 atagcccctg atctcgaaca cgctcaacgt ttagtgagct atttagagaa agaatatctg
     7741 caaaacaacg aaggctttat tcatatctgt aaagtcgata atcaaggagc aagagagctg
     7801 aaatagccct ctcgaacaac catatcacta aataacttaa aggactgact ccaataccac
     7861 ttggagcagc cctttttgat taattttttg aaaagtctat cacttataaa caatcgaagg
     7921 ctatgcctta cgccaaattg tgccgtttgg ggtgtcttcg aggacaatat ttatcgcttt
     7981 gagcttatct cgcacttcat cggcaaccgc ccagttttta gccgctttgg cttcgttgcg
     8041 ttgtttgatt aaggcttcga tttctgccgt ttcatcgtca ttcgcatcac cttttaaaaa
     8101 cgcatcgggg tcttgttcca gtaagcctag cacgccggct aactctttta aacgaacggc
     8161 taaaccgttg gcttttgcca tatcttcggt tttgagtttg ttcaactcac gggcaatttc
     8221 aaataacacc gctaatgccc ccggggtgtt gaaatcatcg tccattgcgg ttttaaaggc
     8281 ttctacatag tgttctccga tggcttcgcc cgacacatca caaccacgca gagcggtata
     8341 taaacgctca agagccgaac gggctaaatc aaggttgtca atgctgtaat ctaataacga
     8401 acggtaatga gcggttaaga agaaataacg taacgattcg gcatcgtata agcctaacat
     8461 atggcgaatg ctgaagaaat tgcccaaaga tttcgacatt ttttctttat caatggtaag
     8521 cattccagtg tgtaaccaat aattgacata atcgccaccg tgagcacagc aagattgtgc
     8581 aatttcgttt tcgtgatgcg ggaacattaa atccgagcca ccgccgtgaa tatcaaaatg
     8641 ttcgcccaac tctttgctat tcattgccga acattcaata tgccagcccg gtctgccatt
     8701 gccccacggg ctttcccagc ttggctcacc ggctttcgac attttccaca agacaaaatc
     8761 catcgggttt ttcttgatgg atttaatttc aacccttgca ccggcttgta gttgctctaa
     8821 attttggcgg gataatgcac catatttctg gaacgattcc acatcaaaca tcacatcgcc
     8881 atcggctgcg acataagcgt gtccgttgtg aatcagtttt tctaccatcg caataatttc
     8941 aggaatatgc ttggtggctc gtggctcaac gtccgggcga agaatgttta acgcatcaaa
     9001 atctttgtgc atttcagcaa tcattctatc cactaattca tcgcaagttt cgttattttc
     9061 taacgcacgt ttgatgattt tgtcgtccac atcggtaatg ttacgcacat agcgtaaatt
     9121 gtagcctgaa taacgtaaat aacgggcaat cacatcgaaa gagacaaaag tgcgaccgtg
     9181 cccaaaatga caaagatcgt aaaccgtgac gccacagacg tacattccca cctgatttgg
     9241 gttaatcggt ttaaattctt ctttttcacg ttttaaggtg ttataaattt tgagcataaa
     9301 gtcctcttgt gtaacattca gtaacaaatg gggctaagta tagcgaataa gcggtctgat
     9361 tttgagattt ttttgcaatt tggcgtaaac tttttaataa tagcgagcga aatttatttt
     9421 ccattccatt tttatttata aaggaacaaa gaatgattac attacatacc aatttcggtg
     9481 acattaaaat cgaattaaac tttgaaaaag ccccgattac cgctaaaaac tttgaagatt
     9541 acgctaaaga agggttttat aacggcacga ttttccaccg tgtgattgac ggctttatga
     9601 ttcaaggtgg cggaatgacg gcaggtatgg ctgaaaaacc gacaaaagat ccgattcaaa
     9661 acgaagcgaa caacggttta agcaacaagc gtggcacaat cgcaatggct cgcacttctg
     9721 atccgcattc tgcttcgtca cagtttttca ttaatgtggc ggataatact ttcttagatt
     9781 atcgctcaaa agagatgttc ggcagaagtg tagtgcaaga ttggggctat gcagtatttg
     9841 gcgaagtggt tgaaggtatg gacgtggtcg ataaaatcaa aggcgtaaaa accggcaata
     9901 aaggcttcca ccaagacgtg ccggttgaag atgtggtgat tgagtctgta agcgttgcct
     9961 aattccgcaa attagcctac aagcggttga tttttcacaa ttttttgcat ttctcagcgt
    10021 tgcaaaaaag tagcagaaat cgactgcttg tttttataga aattgataca gccaaataat
    10081 cagcggcatt gtaaacacac aaagtaaagt ggttacgcca taaatcgcac tggctttttt
    10141 ggcatcttgc ccgtaagcca ccgccatttg ggtcgccgtt gcagcagaag ggctgatggt
    10201 ggctaagaat gtaatcatta ccaccgtttt tccattctct atccagctcg caaaaccgcc
    10261 gagtttaatc accgctaaca aaatcagcgg aataaaaatc aagcggagaa aagccaccaa
    10321 gtaaatgcgt ttatcggtaa taatctcttt aaatggaatt gctgcaatta acatccctgc
    10381 cacaagcatt gctaaaggcc ctaacatatg ccctaaagtt gagagcgtgt ttgcaagcgt
    10441 agcgggcagt ttgatatgta gcaaaaacaa catcatacca atcacaatcg caataatgtt
    10501 gatattaaag atcatctttc taaacggcac attgcctttg ccacaaatca gcagccgtaa
    10561 gtgagaccaa aacaacacat tttgcaccac aataaaagcc gttgaataaa tcacccattc
    10621 attgccgaac agggaggcaa caatcggaat aattaagttg ccggagttgg aataaatagc
    10681 ggtggcttgt tctatgttgt ctaatttcaa cgctcttttg agcagccaac caagcagaat
    10741 taacaagccg tttaataaga cggagattaa aaatgccaga tacaagccgt ttagtatttc
    10801 ggtggtgtaa tctacttgaa aagcagtaat cagcattgcc gggctgataa tgtaaagtcc
    10861 gataaccgaa atcggataac tgtgctccga tttgagtaat ttagttttaa cgatgaggta
    10921 gccgagcagc accatcaggg ttaattgtag aattttatcg gctaataaaa gggctatttc
    10981 cattatcaat taagagcgag tctctcttct cctgcataaa tggtcgcttt gcctttgcgg
    11041 gcaaaagcaa gtaaggtaaa ttgattttca cgagccatat tcactgccat ttcagtggtc
    11101 gctgagatgg cacacaacat ttcaatgcca acggctaagc atttctgcac catttcaaag
    11161 ctggcacgac tggttacaaa cacaaatcca atcggaaaat cagctttagc ataccaaccg
    11221 attaatttat ccaacgccac gtgtctgccc acatcttcac gaatggcaag cagttttcca
    11281 tccggggtaa aaaatgcagc ggcgtggctt gcaccggttt ctttcgataa gaattgagca
    11341 ttttctagct gtaataaaca atcctctaaa atcagtggat tgacgttctg caagcggtta
    11401 tttttcttaa caattttgca actttgatta acctgctcta attgctctac accgcaaata
    11461 ccgcaacctg ttctgcctgc cattgagcgg cgtttatctt ttaatgcaac aaattggcgg
    11521 ctcgatattt caagctgaat ttctactcca ttttcttgtt caattacatc taaaccatat
    11581 aattccgatg gggcatttaa aatcccttcc gccaatgaga atcctaaagc gaagtcctcc
    11641 aaattagccg gtgttgccat cattacagta tgagaaatac cgttatatac caaagcaacc
    11701 ggcacttctg aaattaaatt ttcttcatca tctttttgtt taatactatt agttgataat
    11761 gataattttt tggcatttat ttttgtgatc ttattcacaa tatttatctc tcacttgact
    11821 aaaaagtagt ttattttgtt aaaaagttgt atcattaaat tgtttaaatt tggtttacat
    11881 caaattaatt taagatttta tctatttacc aaaaaaagag tatgttcatt ttcttttatt
    11941 agggggaaaa tgatacacct cttagatcaa tttattaaat taattttgat caaattttgt
    12001 tttatttctc acattatgtg atttggagtg attatgcaga tctcaagacg taagttcttc
    12061 aaggtctgtg caggtggtat ggcgggaact tctgctgcaa tgttgggttt tgctccagca
    12121 acagcattag ctgcaccgcg tgagtataag ctcttaagag caaaagaaac tcgacaaacc
    12181 tgtacttact gcgcggtagg ctgtggcatg attatgtaca gcttaggcgg cgaagcaatg
    12241 aacagcaaag gaaagttaat tcatattgag ggtgattctg accatccagt aagccgtggg
    12301 gcgttatgtc cgaaaggtgc aggggcgttg gactatgtta atagtgaccg ccgtgtgcat
    12361 tatccggaag tgcgtgaagc cggttcaagt gagtggaaac gcatttcttg gcacgaggca
    12421 attgaacgta ttgcccgcca tatgaaaaat gaccgtgatg agaacttcgt cacccacaat
    12481 gaagcagggc tggaagtaaa ccgttggatg acggcaggtt tcttggcagg ctcggcgtgt
    12541 agtaacgaaa ccggtatcgt cacccagaag tttatccgct ctctcggtat gatttttacc
    12601 gacaaccaag cgagtatctg acacggacca acggtagcaa gtcttgctcc atcatttggt
    12661 cgcggtgcga tgaccaacca ctgggttgat attaaaaact ccgatttagt gatcgttatg
    12721 ggcggtaacg cagccgaagc tcaccctgtg ggtttccgtt gggcagttga agcgaaaaaa
    12781 cagaacggtg cgaagttaat ggtggtagat ccacgcttta accgtagtgc tgcggtggcg
    12841 gatatttata taccattgcg tccgggtacg gacattgcgt tcttgttagg tgcggtaaac
    12901 tacctgctta aaaacgacaa aattcaacac gagtatgtga agcattacac caatgccaca
    12961 ttcttactca acgaagggtt taaattcgaa gacgggcttt tcaccggcta cgatgaagcc
    13021 actcgtacct ataaagacaa atccacttgg gcttatcagt tagatgaaca gggtcagccg
    13081 aaacgggata tgacaatgca agatccacgt tgtgtgatca atatgctcaa agaccacgtt
    13141 tcccgctata cgcctgaaat ggtagaacgc attaccggta cgccacaaaa agatttcctg
    13201 attttctgtg aagagattgc gaaaacctca gcgccggata aagccgccac cttcctctat
    13261 gccttaggtt ggacacaaca caccgtgggc gcacaaaaca ttcgctcaat ggcgatcatt
    13321 cagttgctgt gcggtaacat tggtgtctcc ggcggtgggg taaacgcact gcgtggtcac
    13381 tctaatgtac aagggattac cgacctaggc ttgttcccac atatgttgcc gggctatatc
    13441 cgcctgccaa ccgaagcgga cgcaacctta gaaagctact taaatgcgat tgcaccgaaa
    13501 accttagtgg cagggcaagt aaactacggg caaaacaacc cgaaattcgc tgtgagtatg
    13561 ctcaaaacct tctacggcga taaggcaacc aaagagaacg agttcggcta tcactattta
    13621 ccgaaatacc cgaaaggcgg tacagatcac ttccgcttta tcgaacagat gtatcaaggc
    13681 aaagtgaacg gctatttctg ccaaggtatg aacccgattg cctcttaccc taactcgcag
    13741 aagttaatta aagcgttgag caatttgaaa tatttagtca tttttgaccc gcttattacc
    13801 gatacttccg agttctggaa aaatcacggt gagttcaaca atgtgaaccc gtctgaaatt
    13861 caaaccgaag tgttccgctt gccgaccact tgctttgcgg aagaagatgg ttcaattgcg
    13921 aactccggtc gctggttaca atggcactgg aaagcagcag acgcaccaca cgaggcaaaa
    13981 ccggacgtgg atattctgtc tgaaatccgt gccgaactga tccaccttta tcataaagaa
    14041 ggcggaaaag caccgcttga accgttagaa gcgatgacgt ggaactatat gaacccgtta
    14101 gaaccgaagc cggaagagat cgccaaagag aacaacggtt atgcattgga agatctgaaa
    14161 gatgcagacg gcaacatcat cgtgaaaaaa ggcgaactat tatccagctt tacacaaatg
    14221 cgtgatgacg gtacaacctc cggtggttgt tggatctact gcggtcaatg gactccgaaa
    14281 ggtaaccaaa tggcgaaccg tgataactcc gacccatcag gcttaggtaa caccttaggc
    14341 tgggcattct cgtggccggt aaaccgccgt attctataca accgtgcatc ggcagattta
    14401 agcggtaaac cgtggaaccc gaaacgccag ctagttaaat ggaacggtaa aaactggaac
    14461 tatgtggacg ttgccgatta cggtacagca ccaccaaata gccctgtgac accatttatt
    14521 atgcaaccgg aaggggtatc cggcttgttc gtgcgtgaac gtatgcaaga cggtccattc
    14581 cctgagcatt atgaaccgtt tgaaacgcca atcggcacga acccgttaca cccgaatgta
    14641 atcagcagtc cggtggcacg cattctgccg agcgataaag aggatttagg caccagcgat
    14701 gagttcccat atgtcggtac aacttaccgc ttaaccgaac acttccacta ctggacgaaa
    14761 aatgccctga ttaacgtcat tgctcaaccg gagcaattcg tggaaatcgg cgagaaactt
    14821 gccgaagaga aaggcattaa aaatggcgac aaagtacgtg tttggtctaa acgtggcgaa
    14881 attaaagccg ttgccgtggt gactaaacgt atccgttcat tggtctctga cggcaaacca
    14941 atccacacta tcggtgtgcc gatccactgg ggctttgcgg ctacaaccgg tgcgaaaaaa
    15001 ggctattttg ccaataactt aaccgtgcga acaggtgaac caaactcaaa tacacctgaa
    15061 tcgaaatgta tgttattaaa cattgagaaa attgtggggg cttaacaatg agtacagttc
    15121 aaactcaaaa cattattaaa atctccgcaa cctcggcgct gacaccggcg ccgcaggctc
    15181 gttcgcacca agtggaagta gcgaaactga tcgatgtcac cacttgtatc ggctgtaaag
    15241 cctgtcaagt gggctgttca gaatggaatg acattcgctc cgatgtaaat gcaaactgtg
    15301 tcggcgtgta cgacaaccct gcggatctaa atgcgaaagc gtggacagta atgcgcttta
    15361 acgaagtaga agaaaacgac cgtttagaat ggttgatccg taaagacggc tgtatgcact
    15421 gtgccgagcc gggttgcttg aaatcttgcc cgtcaccggg tgcgattatc caatacgcca
    15481 acggtattgt tgatttccaa tccgacaaat gtatcggttg tggctactgt atcgcaggtt
    15541 gtccgttcaa cattcctcgt atgaatccgg acgataaccg tgtttacaaa tgcaccctgt
    15601 gtgtggatcg tgtcaatgtt ggtcaagaac cggcttgcgt gaaaacctgc ccgaccggtg
    15661 caatccgctt cggtagcaaa gaagagatga agttctatgc agaacaacgc attgctgatc
    15721 tgaaatctcg tggctatgaa aatgccggct tgtacgaccc tgaaggcgtt ggcggtacgc
    15781 acgtaatgta tgtattacat catgccgaca aaccggagct ttattcaggc ttaccgaaag
    15841 atccgaagat tgataccaca gtaaccttat ggaaagacgt tttaaaacct gtggcggcag
    15901 tagcgttggg tggtttagct ttagcagaag ttgcacacta tattaccgtt gggccaaacg
    15961 ttgaggaaga tcttgaagaa caccaccata gcgaaaatgc agaaggaggc aaacatgagt
    16021 aagaaatttg aaatcacgaa cgataccaaa atcgttcgtc ataagccctt agctcgtgtt
    16081 agccactggt tcttagtaat ctcttttttt atgacgatgt ttaccggtgt tgccttcttc
    16141 ttccctgact ttgcttggct taccgagatt ttaggtactc cacagattgc ccgtgcagtc
    16201 cacccattta ccgggattat aatgtttatt gcatttatta ttatggcgtt aatatattgg
    16261 caccataata tccctgagaa aaatgatatt cgttgggcaa aaggcattgt tgaagtacta
    16321 aaaggtaatg agcataaggt ttccgataat ggaaaataca atttgggtca aaaattactc
    16381 ttttggactc ttattcttgc gatgttcact cttttagcca cagggattat tatgtggaga
    16441 caatttttct ctcactactt ctcgattcct atgctaagaa ttgcaatttt acttcattca
    16501 gcaagtgcat ttatgctatt taccggaatt ttagtacata tgtatatggc attctgggta
    16561 aaaggctcaa tcagaggtat ggttgagggt tgggttaccg ttcgctgggc aaaaaaacac
    16621 cacccaagat ggtaccgtga agaagtgcta cctgaattag aaagacaagt agctgagcaa
    16681 aataataaat aacctcaagt gcggtattat taccgcactt ttattttatt ggtttaaaaa
    16741 gaatattatg agtatcaaaa tactacctca agatgatatc aaacaagcag ctagttcatt
    16801 tcagcaaccc gagctcttat ttgctaatcc caaaaatctg tatttacgcc gcgctaagcg
    16861 gctacgtgaa ttagccaagc aaaacccatt cggtgaatat atggagtttt ctgctaacct
    16921 cgtggacatt caattagcat tacttgaaag ccagccaatt gcagattatt ctcaaaaaat
    16981 aaccgcttgt gtagagcgca cgcaaggaga aacaccgcta aatgcacaga attttcagcg
    17041 tactgatgaa tggcggacac tactcttagc cattattgag aaattcaagc cttatgcaaa
    17101 tgatactgtt cttgcaacaa ttgaagtatt ggaaaaggca gctaagtcag agctagacac
    17161 acttgctgat aatttgctaa atgaacgata cgaacttgtg ggcgcagata aagctgtctt
    17221 tatttgggct gctctctcac tttactgggt acaattagct caacaattac cacgtaattc
    17281 tcgtgcagaa ataggccata aacatttatg tccggtatgt aactcagcac ctgtaagcag
    17341 tgtgattcat ttcggtgaag ctcaagggtt acgttatcta cactgttctt tatgtgaaag
    17401 tgaatggcat gtagtacgta caaagtgtac aaactgtgat gaaaccggca aactggatta
    17461 ttggagctta gatacagtag aagcagcagt taaagctgaa agttgtggcg actgccattc
    17521 ctacttaaaa gtactctatc aagataaaga cgtgaatgtg gaacctgttg ctgatgattt
    17581 agcaactcta ttcttagatt ccgagatgga acaaaaaggt ctttcaagaa gtgggataaa
    17641 tccattttta tttcaagtag agtaactcat ttacaacaaa aacggagcat aacgctccgt
    17701 tttttattac atttaactca tacactatac ttttttaatc agctattttt ttaacttcac
    17761 agcggttagc aataatctcc cgatctgaca taaatgcgta tcggcattga gatttaaaat
    17821 attgaatcac agaatcatca agaggtcgtt gtgctccaac acgtaattcc tccatagaaa
    17881 aattactaac ctcttcatct ttctctttat ttttcaatac cttacgttca gatattctaa
    17941 acttaggctt gtcttgctgt ttttttactc cgtttaattt ttctttatta ctaggaatag
    18001 gattacttgc ataactaata ctattcatcg taagaaaaag agaaataaca aaaaagctaa
    18061 aagcgttttt catagcaaac ccataaataa aatgtagcat aatcataaaa ttacgtaaca
    18121 ttttattaca tttagcgcat ggttacaaat tcttcagatc ctgtcgggtg aatagccact
    18181 gtgttgtcaa aatcagcttt cgttgcgccc attttaattg caacagcaaa accttgaatc
    18241 atttcatcaa caccaaaacc aataccatgt aacccaacca ctttttcccc ttccccaaca
    18301 caaactaatt tcattcggca aggttgacga tgttgtgtaa ccgcagtata cattgcagta
    18361 aatgaagatt tatacacttt cacattttct gccccatatt gctcaatcgc ttttggctca
    18421 cttaaaccaa cagtacctat tggtgggtgg ctaaaaacga ctgtcggtac taagctataa
    18481 tccaaatgtt catttggttt attattgaac aaccgttccg atagcctgcg accagctgca
    18541 actgcaacag gagttaattc aataccacct tcaataatat caccaacagc atagatattt
    18601 ggcacattag tattttggaa tttatccact ttgataaaac cacgctcgtt ggtttcaaca
    18661 ccagcagcct ctaaattaat cttatctgtc gctggctcac gaccaatagc ccacaccaag
    18721 ctttcaacag aggtttcacg accatcttgc aattttaatg tcaatgaacc atctgcattt
    18781 ttaactactt cttgaggagt cgcttgtgta tgtaattcga tcccatcttg agctaatact
    18841 tcaagcaatg tatccactat taatgggtct tgattacgca ttggagcatg ttgacgaaca
    18901 aaaagatggg tatttactcc taaactatta aatactccag ctaattcaac tgcaatatac
    18961 cctgccccca caattgctac ggacttcggt aaagcatcta gtgcaaatac accatcagaa
    19021 gtgataccgt attcagcccc tttcacattg ggtacagttg gacgaccacc tgttgcaatc
    19081 agaatatggt ctgctgtgac ctcctcaacg gaaccatcag cataactcac ttctaatgtt
    19141 ttagcatctt taaagcgagc aaaaccattt aaaacatcaa cattattttt tgccagcaca
    19201 ttaccatatg aggtatgaat gcgcccaata taggcctggc gactctcaac taatttggca
    19261 taatcaaaat tatttaccgt aatgtcaaaa ccataatcag gggcgtaatg gttaatcgct
    19321 tctgcaactt gtgcaccata gaacatcact tttttgggta cacatcccac gttcacacaa
    19381 gtgccaccta aatgttttgc ttcaataatg gcacattttt gcccatagct tgctgctcga
    19441 ttaattgaag caataccacc actaccaccg ccgatagcaa tataatcata atgtttagcc
    19501 ataagctatt cctcgatcta taaaaacaaa agcaacttat tcgttaagcg ctttatcaaa
    19561 ttaaatttgc atagaagact aatgtttcat atgccctgaa ttcaacattt tatcaatata
    19621 cgccatcgct aatgctgaaa caataaaggc taagtgaata actacttgcc acatcatttg
    19681 cttttcatca agatttgaag cattgataaa tgtttgtaat aaatgaatag aagaaatact
    19741 gataattgcc attgaaagtt ttactttcaa aatagtcgca ttaacgtgat ccaaccattc
    19801 tggctgatca gggtgatcat ctacttttaa tctagagaca aaagtttcat atcctccaac
    19861 aataaccata accaaaagat ttgcaatcat caccacatct attaaattta ataccgctaa
    19921 cataacagta tttgaatcca tttcatttaa attgataact agatgataca atgatttaat
    19981 aaacttatac gcatatatcc cctgtacaac aatcaaccct aaataaatag gtaattgtaa
    20041 ccaacgactt gcgaaaataa ttttacctaa aatatttgcc ctagtattta attccgaatg
    20101 catatatctc ctataaatag caatacaaaa ataaattaca acgctcaaat tttaacaatt
    20161 ttttgccaaa aaattaagat atttaaccgc ttgcacctta tattttaaaa ccttgtccat
    20221 cgttccaaga aaccgtatat tctagaggta aacggcaact tggcaacgct gggtttgctg
    20281 ctttaccgat agctagtagc ataacaggca aataacgttc tgcatctata ttcaataatt
    20341 ttaatacagc agggcgctca aacacgccta tcgcatgagt atcatagccc ttatctttgg
    20401 caattagcat taattgcatt gccgccaaac tagtatcaat taatacctga tctctaattt
    20461 ctgcttgagt tgcttggtta tgaagattta gtaaaaaatc aaatttacgt tcacgaaact
    20521 ctttatgcaa acacccagtt tctaccgatt gatcaacaat tgcgcctaat aatttttcat
    20581 attgcaaatc tgccaatatc accacaatag cagacgctgt ttcacaaggt gggccattaa
    20641 aggcaacatt ttttgataat gctgctttaa gaatttcaac atcaataatg acaaaacgcc
    20701 aaggttgcag atttgctttt gagggagcaa gctgggataa agcgaccatt tcttctaatt
    20761 cagttctact aatcttaatt gttgaattaa aagctttgat agttttacgc tgttcaatcg
    20821 tatgtttcaa ttccatctct tttctcctat ctctcaaaca attgagatag tctataa
//
LOCUS       DANLXO010000036        20714 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.036, whole genome shotgun sequence.
ACCESSION   DANLXO010000036 DANLXO010000000
VERSION     DANLXO010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20714
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.036"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            24..737
                     /locus_tag="PXD69_001131"
     CDS             24..737
                     /locus_tag="PXD69_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HDL6283340.1"
                     /translation="MNQKKLVSLIVVIVLAIISQIFSFFDKKEPSKAQEKSTQSSQSH
                     QVSTSSLGNYDVQMKNDRLKQHIVDTDYYTLALSWSPAFCQKQKRNNHGKIPSHLEYQ
                     CGGSADFGWVIHGLWPQSGKARSVDEHPRYCQGDLPMVAEQTIKQYLPESPGATLLQG
                     EWEKHGACAFNQADDYFAKQKELFNQLKLPDTEMSKLALFNWMRANNPHLQNVYLGGS
                     KDELYICYDKAFQPMDCPR"
     gene            737..1231
                     /locus_tag="PXD69_001132"
     CDS             737..1231
                     /locus_tag="PXD69_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HDL6283341.1"
                     /translation="MADLRQLKMQVQRQLKRDLERANHYFNTTFTPPSISYAVRGVKA
                     GVAYLERNEVRFNPVLLQENEQAFIRQVVPHELAHILVYQHFGRVQSHGKEWKMMMET
                     VLGVPAEIYHCFDTQSVQQQFSYQCACQTHQLSIRRHNAVMRDKKSYICRLCKTQLHF
                     VEKS"
     gene            1336..2616
                     /locus_tag="PXD69_001133"
     CDS             1336..2616
                     /locus_tag="PXD69_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL6283342.1"
                     /translation="METIVIVGGGAGGLELATYLGNKLGRKQKAKVVLIDRNATHLWK
                     PLLHEVATGTIDEGTDALSYRAHAKNHSFEFQQGTLVAVDREKKTVSLAPIYNDQNQL
                     LVKERHISYDKLVIAIGSKSNDFGTKGVAENCIFLDGSEQAKDFQKRMMELFLRFSHS
                     ENKDVKIAIVGGGATGIELSAELYHVVKNLNSYGFGKLNRASLKVTLIEAGPRLIPAL
                     PEKVSVSAFHELKKAGVSVRLGTMITEARPDGLMTRLGEKIEADIMVWAAGVKAPEIT
                     REFGFETNRLNQIEIKDTLQTTVDESVFVIGDCASLIQDGKPIPPRAQAAHQMATRCG
                     KNIVALIEGKEMKPFRFNDKGSLLSFSKFGTVGNLMGNLVSGDMFIEGKIARLAYLSL
                     YRMHQVALHGCVKTGLIVLVGQINRFLRPTMKLH"
     gene            complement(2703..3740)
                     /locus_tag="PXD69_001134"
     CDS             complement(2703..3740)
                     /locus_tag="PXD69_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6283343.1"
                     /translation="MNVLKLISLKSILIASGIFLSAQAAQAEGRLTVYCSVQNNVCEE
                     MTKQFSHKYNVETKFIHGGTGTIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEA
                     YRSPKQAEILPQFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSD
                     PRLKGEVQLPDPRSSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKSTLVTSNL
                     ARGESAVTVGFVHSYATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMD
                     WVLSKEAQEIPWKKHGVYQTPTNINAEVAPQSTKAEALDFVEIDYQKAGSSEEGKRLI
                     DKWLAEIKLAN"
     gene            3962..4660
                     /locus_tag="PXD69_001135"
     CDS             3962..4660
                     /locus_tag="PXD69_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDL6283344.1"
                     /translation="MENSWKYAFKLITPIFMGYFAAGVAYGMLATNAGMPAWFTIVMS
                     FTVVSGTAQYAAIPFFVSGVGAVSVFLSTLLMSLRFSFYTLNMMEHKPISKAKSLVAI
                     AGLTDEGFAVLSSLPKEQKQALFFKIAVLCVAYWTFSTIVGVLLGDSVANYIPHLDFA
                     LPCLFAILAYEQYKNQKQWKPIVIALIGFLLARQITETSVLLVAILVAIVIVALLPQS
                     SSIKLEKGVENEHK"
     gene            4671..4973
                     /locus_tag="PXD69_001136"
     CDS             4671..4973
                     /locus_tag="PXD69_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDL6283345.1"
                     /translation="MFAALVLGSQICRFLPEFLPKKVLSSPILQKLNKMLPLVIMLLL
                     LLTSLNFPKNGEGFNLILAQILALIGVLGSYVWLKNTFLSVALGIFGVNVFLSLLG"
     gene            complement(5094..6395)
                     /locus_tag="PXD69_001137"
     CDS             complement(5094..6395)
                     /locus_tag="PXD69_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL6283346.1"
                     /translation="MSLFKFEERGSNARQEIIAGLTTFLAMVYSVIVVPGMLSQAGFP
                     AESVFIATCLVSGLGSILIGLWANAPMAIGCAISLTAFTAFSLVLGQQVSIPVALGAI
                     FLMGVVFTLISATGIRTWILRNLPSSIAHGAGIGIGLFLLIIAATNVKLVVNSGMDIP
                     VKLGDFTSFPVLVSLIGLAAIIGLEKLKVKGSILWVIIAITIVGLIFDPNVKYTGFFK
                     MPSFGENSQFLNLDIMGALNTAILPVVFALVMTAIFDATGTIRAVAGQAGLLDKDGQI
                     INGDKALTSDSFGSILSGLFGTAPAAVYIESAAGTAVGGKTGLTAVVVGIGFLFMLFF
                     QPLAFLVPSYATAPALMYVGLLMLSNVSKLDFSDFVGAMSGLVCAVFIVLTANIVTGI
                     MLGFATLVIGRLISGEANKLNLGTVIIAIILVAFYAFDLAI"
     gene            complement(6528..7502)
                     /gene="secF"
                     /locus_tag="PXD69_001138"
     CDS             complement(6528..7502)
                     /gene="secF"
                     /locus_tag="PXD69_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDL6283347.1"
                     /translation="MAIENVQQDVAEIKLPYKLIPFMKYRYVGFIFSLIVTALCIFTI
                     ATKGFNWGLDFTGGTVIETQFSQPADLAKLRTELENSGYGNALVQTTGSQKDLMIRLA
                     ASAGDMSVGNKVMEMIHQKLDPNATIKSIEFVGPNVGEELTQGAIYATLATLAMLLIY
                     VGTRFEWRLAVGGIVALFHDVLVTIGIFSFLQIEIDLTFVAAILSVVGYSLNDSIVVF
                     DRVRENFSKVRRSSSIEIIDISLSQTLSRTLMTSVTTLFVVLALFYLGGPTLHSFSLA
                     LLIGIGFGTYSSIYIAIGVALQLGLKREHMVQPKVEKEGADQDAFIDY"
     gene            complement(7512..9353)
                     /gene="secD"
                     /locus_tag="PXD69_001139"
     CDS             complement(7512..9353)
                     /gene="secD"
                     /locus_tag="PXD69_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDL6283348.1"
                     /translation="MLNRFPLWKNLMVIFVIAIGALYALPNLYGDDPSVQISGTRGQQ
                     ATPETLSQVQSTLSAMNIQPKSAVLENGSILVRLESSEQQLPAKEKISEALGNNYSVA
                     LNLAPATPQWLSDIGGSPMKRGLDLLGGVRFLMEVDMNTALAKQQDTLQDSLRSDFRK
                     EKLQYQAVKKGENFATEVEFADNDTAEKAVRLVRLSHPTLDILVNDNKVTLTPSAQAL
                     SESRTMAIEQNLSILRKRVEELGVSEPTIQRQGADRIVVELPGVQDTARAKELLGATA
                     TLEFRLVNTEANVASAAKGIVPADSGLQNTRDGEPVVLRRKPSLGGEHIIDATSGTDE
                     RGLPQVSIRLDTEGGEMMGEITKMAIQKPMATLYTEFKDSGRKDANGKVILEKHQEVI
                     NVATIQTRLGNQFQITGINSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVK
                     QGMEASILGLGLTILFCLAFYKVFGIFASLALIVNMILTIGLMSLIGATLTMPGIAGI
                     VLAVGMSVDANVLIYERIKEEIRNGRPIQQAIHEGYNGAFSSIFDSNLTTILTSLVLY
                     GVGTGPVKGFAVTLALGVIISMFTAITGTRMLVNWVYGGKRVKKLWI"
     gene            complement(9393..9686)
                     /gene="yajC"
                     /locus_tag="PXD69_001140"
     CDS             complement(9393..9686)
                     /gene="yajC"
                     /locus_tag="PXD69_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL6283349.1"
                     /translation="MQQGGGMEMIFILIIFGAIFYFMIYRPQAKRQKQQRDLLASLTK
                     GDEVLTSGGLIGKITKVTADNDNIVIALNDTTEVTIKRDFVVAVLPKGSLKSL"
     gene            9887..10444
                     /locus_tag="PXD69_001141"
     CDS             9887..10444
                     /locus_tag="PXD69_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HDL6283350.1"
                     /translation="MKKLFAQAVIFGAFFASSAFAHNVQLNQALPAVSVAKDGELAVA
                     GGKVSYKNWHSSSLAGKVRVIHHFAGRSSVKEKNEDLMTAIKNAGFDRSKYQTVTIVN
                     ADDAIVGTGVFVKNSVENGKLDNPHSQVVLDQQGSVKKAWGLKEKESFIAVLDKSGKV
                     QFTSEGKLSAKQIQEVIGLVKTLTQ"
     gene            complement(10485..11453)
                     /locus_tag="PXD69_001142"
     CDS             complement(10485..11453)
                     /locus_tag="PXD69_001142"
                     /EC_number="5.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HDL6283351.1"
                     /translation="MKLFTLENAFLRITLSDVGASWLSCIVKMPNEEREVLVTTSAKN
                     WQKQTAFFGATIGRYANRIANAEYRLNGKTYQLAKNNGEHNLHGGELGADKIVWQLES
                     QSEQAVKFSYFFADGEEGFGGEVKAFVEYRLTENELQISFDAVANQDTPLCLTNHAYF
                     NLQGSETILDHELIINADGYLPVDASGIPNAPLKKVESTSFDFRNAKKIGQDLLADDD
                     QKAVKGYDHSFHLAKNSENPTACLAVEDLKMELRTSMPALQLYTGNWLKGQPNLTKGE
                     YEDYAGVALEPEFFPNSLNQPELLQFGGITKAGEEYHHTISYRFII"
     gene            complement(11579..12742)
                     /gene="galK"
                     /locus_tag="PXD69_001143"
     CDS             complement(11579..12742)
                     /gene="galK"
                     /locus_tag="PXD69_001143"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HDL6283352.1"
                     /translation="MKPQEIALQQFEQHFGYKAERTVFAPGRVNIIGEHTDYNDGFVM
                     PCAINYGTAVSFAKRSDNKWRVFAIDLNQQDEFDLSQAIEPSEQKWANYVRGVVKFIQ
                     AKHPEFKQGADLAITSDVPMSSGLSSSAALEVSIGKTAQLLGDLPLSLPQIALIGQEA
                     ENKFVGCNCGNMDQLTSALGQQDHLVMIDCRSLEITPTPVPQGYSIAIINSNVKHDLV
                     TGEYNSRREQCEFAAHFFGKAKLRDVTAEQFIERASELSEENELAYKRAKHIISENQR
                     VLEAVEALKANDMVKLGELMAQSHDSMRDDFEITCPEVDCLAEIAQQAIGKNGGARMT
                     GGGFGGCVVCLVPNDKVEDLRQAVANNYEKQTGIKETFHVCTASDGVRECPAR"
     gene            complement(12752..13798)
                     /gene="galT"
                     /locus_tag="PXD69_001144"
     CDS             complement(12752..13798)
                     /gene="galT"
                     /locus_tag="PXD69_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HDL6283353.1"
                     /translation="MSEFVLNDHPHRRFNPLKNQWILVSPHRAKRPWQGQQEEIVQDE
                     KPSYDPSCYLCPGNKRITGEQNPNYTKPFVFKNDFSALLPDTPAPIPNDDPLFQISHT
                     QGESRVICFSPDHSKTLPQLSIEEITDVVTVWQEQANELKEHYQWVQIFENKGSMMGC
                     SNPHPHGQIWASNFLPNEIAIEDECQAKYFAQYGSPLLLDYAQRELDKQERIVAETED
                     WIAVVPYWAAWPFETLLLPKAKQFKSITDLNEAEKADLALALKKLTTRYDNLFNISFP
                     YSMGFHFAPFNGKENAHWQLHAHFYPPLLRSATVRKFMVGYEMMAESQRDLTPEQAAE
                     RLNAVSDTKHYKDK"
     gene            14011..14862
                     /locus_tag="PXD69_001145"
     CDS             14011..14862
                     /locus_tag="PXD69_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HDL6283354.1"
                     /translation="MERLNKFDAWLMNHKPNARLSGASRLLTEFWFFGLKEARACLFA
                     GLFFIAMFSVPKTGLWGLPRYDILLIFAIVVQIAMVKLGLETWDELKAISLFHLVGFV
                     LEVFKTSSNIQSWAYPDFAYTKLFNVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHLPY
                     WLATLTALMIYLNFFTHHYIGDYRWYIAAFALGLYARTFVFFTPYDITRKMPLLLSFF
                     LIGFFIWLAENIGTFAGIWRYPNQFGAWSMVHMSKWSAWALLVMMTFTIIVHLKHIKQ
                     TVRVSSD"
     gene            complement(14948..16033)
                     /locus_tag="PXD69_001146"
     CDS             complement(14948..16033)
                     /locus_tag="PXD69_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL6283355.1"
                     /translation="MEYRYYITTALVIAVLQLFLFNFAKTVSWLFNLSSKNRKTVGIL
                     TFLVANGLVILHLTRTFALFRIMAFILVLLLFAFFISFFTACIYKIFNGNTTVNRWLK
                     IAYPFAFFGLLGLGYYNAYTPTVVHYSVKLDKPLEKPLRIGMASDLHLGKLFGTKQLD
                     QLAEIFNQQKVDLILLPGDIMDDNTEVYVADKMQPHLAKLKAPLGVYATLGNHDFFGA
                     QETIAKEITDAGITVLWDQTAEINGKFTLIGRNDDLVKNRPSAEQLLQNVNTKLPVIL
                     LDHRPTEIEQHAKLPIDIQVSGHAHKGQVFPASIITKLIYRLHYGYEKIGFGHYFVTS
                     GYGFWGVPMRLGSQSEVMIIDVEGENP"
     gene            complement(16055..17035)
                     /locus_tag="PXD69_001147"
     CDS             complement(16055..17035)
                     /locus_tag="PXD69_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL6283356.1"
                     /translation="MLFDSIQFSIGVTLPTILLMLFGIFPRRRKFIDDTFCNMASKVV
                     FNFTLPPMIFLNMLKSPLDFSSQINLISTGVGGSILIYLWAEWWAARHIENRRYRCIF
                     TQGTFRTNAAILGIALILNAYGDKALAAASVYISCLVITFNVLAVITLTSSLSEKKVN
                     FGRLILSILRNPLILAVIAGLTFNYFELSHQIPTPLESAGKLMASLTLPLALICTGAS
                     INFKQLKQFNQGVESTINKIVLFSASIRLIFAPIFLLLLGKFVFQLPPMELGIVFVAA
                     SAPVASATYAMTRNYGGDGEAAANLIGITTLGSMFSASIGLFLLRQIGWV"
     gene            complement(17138..18236)
                     /gene="prfB"
                     /locus_tag="PXD69_001148"
     CDS             complement(join(17138..18160,18162..18236))
                     /gene="prfB"
                     /locus_tag="PXD69_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550889.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDL6283357.1"
                     /translation="MFELNPIKNQLTDLSERTAVIRGYLDFEHKVERLEEVNAELEQP
                     DVWNKPEKAQALGKERAMLEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVE
                     ADELEKKLADLEFKRMFSGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKG
                     FKAELMEASDGDVAGIKSATVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFS
                     AAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQN
                     GRSQHQNKDQAMKQLKAKLYELEMSKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DHRTGVEHRTTQQVLDGDLDKFVEASLKAGL"
     gene            18492..19400
                     /locus_tag="PXD69_001149"
     CDS             18492..19400
                     /locus_tag="PXD69_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HDL6283358.1"
                     /translation="MAKRPSDIDATLLQLEILRRIPKLPAKIDAKSLHQQLLDAGFER
                     DIRTVQRSLKMLCEHFDIECDERSKPFGYSWKIRSEGLALPILNEQQSLLLKLAEQQL
                     KYLLPANLMASMKPFFEQADRMVSGAKDKPEYQWLNKVCSTPTSLPLIPAKIKEEIFN
                     SVSQALFQNKLLKIEYQNQHGKKHQATIMPLAISQQGASIYLVCRYEGFDDNRLLALH
                     RIRKAEISTFSFERPKDFNLQAYQDAGHLGFGNGEKASLTFSISRDAGFHLTETPLAK
                     DQKILEESETHYRIQAIVADNDMLTW"
     gene            19701..20342
                     /locus_tag="PXD69_001150"
     CDS             19701..20342
                     /locus_tag="PXD69_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HDL6283359.1"
                     /translation="MPFQLTFCQQAGNQHQKNQDALFNGKAVYQWQLKNAESYLLDND
                     KVIFGVADGVSSHPRNHLASHYLMALLSQCQSLDSQWLRQAHGDFCEKLAKDYFGASC
                     TFVACELHHNGRGRMVNVGDSRAYKITANGEWQQLSFDHTILAEMKQKGLVKEGSNYA
                     SMYNGLTDCIVADFDADDFRIHIAEFQLEKGESILLCSDGLHEQLAPEAIQAI"
     gene            20509..>20714
                     /locus_tag="PXD69_001151"
     CDS             20509..>20714
                     /locus_tag="PXD69_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005637830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDL6283360.1"
                     /translation="MKNDFHYAAELIRNADGILITAGAGMSVDSGLPDFRSVGGLWNS
                     YPPLKKFNLQFMQIATPLAYQERP"
BASE COUNT         5938 a         4268 c         4435 g         6073 t
ORIGIN      
        1 ctatacttta agattttata tttatgaacc aaaaaaaatt agtttctttg attgtcgtta
       61 ttgtgttggc aatcatttct caaattttta gcttttttga taaaaaagag ccttcaaaag
      121 cacaagaaaa atcgacccag agtagtcagt ctcatcaagt ttcaacttca tcactaggga
      181 actatgatgt gcagatgaaa aacgaccgtt tgaaacagca tattgtagat accgattatt
      241 acaccttagc gttgtcgtgg tcgccggcgt tttgccaaaa acaaaagcga aataatcacg
      301 gtaaaattcc gtctcatttg gaatatcaat gtggtggctc agcggatttt ggttgggtta
      361 ttcacggctt atggccgcaa agtggcaagg caagaagtgt tgatgaacac cctcgttatt
      421 gccaaggcga tttgccgatg gtggcagagc agacgattaa gcaatattta cctgaatcgc
      481 cgggggcaac tttgttgcaa ggcgaatggg aaaaacacgg tgcttgtgcc tttaaccaag
      541 cggatgatta cttcgccaaa caaaaagagc tatttaatca gctcaaatta ccggataccg
      601 aaatgtctaa attagcactg tttaactgga tgcgagccaa taaccctcat ttgcaaaatg
      661 tctatttagg gggtagcaaa gatgagctgt atatttgcta tgataaagca tttcaaccaa
      721 tggattgccc acgctaatgg cagatcttcg ccaactgaaa atgcaggttc agcgccaatt
      781 aaagcgtgat cttgaacgtg caaatcacta ttttaatacc acttttacgc caccaagtat
      841 tagctatgcg gtgcgtggcg taaaagccgg tgtggcttat cttgaacgca acgaagtacg
      901 gtttaatcct gtgttattgc aagaaaatga acaggcattt atccgccaag ttgtgccgca
      961 cgaactggct catatcttgg tttatcaaca ttttgggcgg gtacaatctc atggtaaaga
     1021 gtggaaaatg atgatggaaa ccgtactggg tgtgccggcg gaaatttacc attgttttga
     1081 tacccaaagt gtgcaacagc aatttagtta ccaatgtgcc tgccagactc accagctttc
     1141 gattcgccga cacaatgccg tgatgcgaga taaaaaaagc tatatttgcc gtttatgtaa
     1201 aactcaactc cattttgtag aaaaaagtta atgtggagaa aagttaagag aatgttacga
     1261 tttagctaga cattcctgtt taaacgccta caatttgccg tagtttttat ttttaatttt
     1321 atttccggag tatttatgga aacaattgta attgtaggtg gcggtgcagg cggtttggag
     1381 cttgcaacct atctaggcaa caaattaggg cgtaaacaaa aggcaaaagt ggtgctgatt
     1441 gaccgcaatg caacgcattt atggaaacca ctgttgcacg aggtggcaac cggtactatt
     1501 gatgagggaa ctgatgcgtt aagctatcgg gctcacgcta aaaatcatag ttttgaattt
     1561 cagcaaggta cgctggtggc ggtagataga gagaagaaaa cggtttcact cgccccgatt
     1621 tataatgatc aaaaccaact tctcgttaaa gaacgccata tcagttatga caaattagtg
     1681 atcgcgatcg gcagtaaatc caatgatttt ggcaccaaag gggttgcaga aaattgcatt
     1741 ttcttagatg gctcagagca agcaaaagat ttccaaaaac gaatgatgga gctgttttta
     1801 cgtttttcac atagtgaaaa taaagatgta aaaattgcga ttgtgggggg gggagcaaca
     1861 ggtattgagc tttcagcgga gctttaccac gtggtgaaaa atttaaattc ttacggcttt
     1921 ggtaaattaa accgtgccag cttgaaagtc actttaattg aggcaggccc tcgtttgatt
     1981 ccggcattac cggagaaagt gtcggtttct gctttccacg aattgaaaaa agcgggtgtt
     2041 tcggtgcgtt taggtacgat gattaccgaa gctcgtccag atgggctaat gacccgttta
     2101 ggtgagaaaa ttgaggcgga tattatggtt tgggcggctg gcgtgaaagc ccctgaaatt
     2161 acccgtgaat ttggttttga aactaaccgc ttgaaccaaa ttgagattaa agacacgcta
     2221 caaaccaccg ttgatgagtc agtgtttgtc attggcgatt gtgcatcatt aattcaagat
     2281 ggcaagccaa ttccacccag agcacaagca gcccaccaaa tggcaacccg atgtggtaaa
     2341 aatattgtgg cattgataga aggaaaagag atgaagccgt ttcgatttaa cgataaaggc
     2401 tcactgcttt ccttctcaaa attcggcacg gtgggtaatt taatggggaa tttagtgagc
     2461 ggtgatatgt ttattgaagg taaaattgcc cgcttggctt acctctcgct ttatcgaatg
     2521 caccaagtgg cattacacgg ctgtgtcaaa accggcttga ttgtgttggt agggcaaatt
     2581 aaccgtttct taagaccaac aatgaaacta cattaaacaa aaatccgcat caaatgatgc
     2641 ggatttttta tggcaaaata acaagcggtt attttcttgc ctatttttgc aaatactcac
     2701 gcctagtttg ctaatttaat ttccgccaac catttatcaa ttaagcgttt gccctcttcg
     2761 ctggaacctg ctttttggta atcaatttcc acaaagtcta acgcttcggc tttggttgat
     2821 tgtggagcaa cttcggcgtt gatgtttgtt ggggtttggt aaacaccgtg ttttttccaa
     2881 ggaatttcct gtgcttcttt tgaaagcacc caatccataa agagtttggc gttatctaaa
     2941 ttacgggcat ttttgataat gctgacaccg cctaacgcat agcccacttt accttccgga
     3001 ataatggctt caataggcgc acctttttct ttttcagtgg cataactatg tacaaagcct
     3061 accgtaaccg cactttcacc acgagcaaga ttgctggtga ctagggtgct tttcacatat
     3121 tgcgaaacgt tattgttgag ttttttcaga taatcaaagg ttttctcttc gccccataag
     3181 gttgaaagag tggtcataaa cgtataagtc gtgccggagc tacgaggatc aggcagttgt
     3241 acttcacctt ttaagcgagg atctgataaa tcttcccatt ttttcggtgc ctcaatgcct
     3301 agtttggcga gtttttcggt attcacgcct aaccctaata caagcatata aacgatagag
     3361 gtaaatttac cttgttcact ttcaactaag gatttaaatt gtggcagaat ttcagcttgt
     3421 tttggtgaac ggtaggcttc cagtaagcct aattcgcctg cttgaaagtg aggttcaatc
     3481 gtgccgccat accaaatatc tgcctgaggg ttcgatgctt ccgcttttac ttttccgaaa
     3541 attgtaccgg ttccgccgtg aatgaattta gtttcgacat tatatttgtg tgaaaattgc
     3601 ttggtcattt cttcacaaac attattttgt accgagcaat aaacagttaa acgaccttct
     3661 gcttgtgctg cttgagctga taagaaaatg ccagaggcga ttaagatcga ttttaatgag
     3721 attaatttga gtacgttcat cactttcctg aaaacataaa ataaaaggta gtgaagtcta
     3781 gcatttcaaa gcgctggttg aaaatagtta attgcaatga agtagggcaa ttgtgcctat
     3841 tactttaata tttaccaact atttgcaagt tttagcaaaa aataaccgct tgtagtagct
     3901 cttgctattt tgtcaaaatt cagaataata aatgccttta gtctaatgtt aaattttagt
     3961 tatggaaaat agttggaaat atgcttttaa attaatcacg ccgattttta tgggctattt
     4021 tgcggcaggg gttgcttacg gaatgcttgc caccaatgcc ggaatgcctg cgtggtttac
     4081 gattgtaatg agttttaccg tggtatcggg gacggcacaa tatgcagcga ttccattttt
     4141 tgtctccggt gttggggcgg tgtcggtctt tctcagtacg cttttaatga gtctacgttt
     4201 tagtttttac accttaaata tgatggagca taagccgata tccaaagcga aaagtctggt
     4261 cgctattgca ggtttaactg atgaaggctt tgcggtgtta tcttcattac cgaaagagca
     4321 aaagcaagca ttattcttta aaatcgctgt gctatgtgtg gcttattgga cattttccac
     4381 gattgtcggt gtgttgttag gcgattcagt ggcgaactat attccgcatt tggattttgc
     4441 tctgccttgt ttgtttgcaa ttttagccta tgagcaatac aaaaaccaaa aacaatggaa
     4501 accgattgtg attgcgttaa tcggattttt acttgctcgt cagattaccg aaaccagcgt
     4561 gttattggtg gcaattttag tagcgattgt cattgtggct ttattacctc aatcttcttc
     4621 aatcaaacta gagaaaggag tagaaaatga gcacaaatga tactttgata atgtttgcag
     4681 cattagtgct cggctcgcaa atttgtcgtt ttttgccgga atttttaccg aaaaaggtgt
     4741 tatcttcgcc cattttgcaa aaattaaaca aaatgttacc gcttgtgatt atgcttttat
     4801 tgcttttaac gagcctaaac tttcctaaaa acggggaagg ctttaactta atattggcac
     4861 aaattctggc tttaataggc gtattaggta gctatgtttg gcttaaaaat acctttttaa
     4921 gcgtagcgtt ggggattttc ggtgtgaatg tatttttatc cctgttagga taaataccaa
     4981 aggtcatttt ataggagcga aacaccttcg ctcaatcatt aacagatgtg gggcgaaaaa
     5041 tttttcgccc cttatttatc acaagcggtc tttttctttc aattttttgc aaattaaatc
     5101 gctaaatcaa acgcatagaa ggcaactaaa ataatcgcaa taattactgt acctaggttt
     5161 aatttattgg cttcgcctga aattaagcga ccaatcacaa gggtggcgaa acctagcata
     5221 atgcctgtca caatgttggc ggttaatacg atgaacaccg cacagactaa acctgacatt
     5281 gcacctacaa aatcgctgaa atctaattta gagacattac ttagcattaa taagcccaca
     5341 tacattaatg ccggtgcggt ggcatagctt ggtactaaga atgcaagagg ttggaagaac
     5401 agcataaata agaaaccgat accaaccact acagcggtta aacctgtttt accgccaacg
     5461 gctgtacctg ctgccgattc aatatacact gccgctggtg ctgtaccaaa taagcccgat
     5521 aaaattgatc cgaatgagtc agaagttagg gctttatcgc cattgataat ttgtccgtct
     5581 ttatctaata aaccggcttg ccctgcaacc gcacggatag tacctgttgc atcaaaaata
     5641 gcggtcatta ctaacgcaaa cactaccggt aaaatggcgg tatttaatgc tcccataata
     5701 tcaagattta ggaattgcga attttcacca aaactcggca ttttgaaaaa gcctgtgtat
     5761 tttacgttag ggtcaaaaat taaacctacg atggtaatag caataatgac ccataaaata
     5821 ctgcctttta ctttcagctt ttctaacccg ataatggcgg ctagaccgat taatgacact
     5881 aaaaccggaa atgaagtgaa gtcccctaat ttaaccggaa tatccatacc gctattgacc
     5941 actaatttaa cgttagtggc ggcaataatc agtaagaata aaccaatacc aattccagca
     6001 ccgtgggcaa tgctgcttgg caaattacgt aaaatccaag tacgaatacc ggtagcagaa
     6061 atcaaggtaa atactacgcc cattaagaaa atcgccccga gtgcaacagg aatagaaact
     6121 tgttgcccta atactaagct aaaggcagta aaagcagtaa gtgaaatcgc acaaccgatt
     6181 gccattgggg catttgccca taaaccgatt aagatagagc cgagacctga aactaaacag
     6241 gtggcaataa ataccgattc ggcaggaaag cctgcttggc ttagcattcc cggcacaacg
     6301 atgacggaat aaaccatggc taaaaaggta gttaaaccgg cgatgatttc ttgacgagcg
     6361 tttgaaccac gctcctcaaa tttaaataac gacataagaa cctcaaaaga agaaaatgaa
     6421 aggggaaatt ttaggatgcg gaattttaca gaaatttaaa ataattagca aacgtttgcg
     6481 taaaaagtga aagaaaagca ggaataaatc ctgcttttgt ttgatggtta gtaatcgatg
     6541 aaagcgtctt gatctgcccc ttccttttca actttaggct gaaccatatg ttcacgtttt
     6601 agcccaagtt gtagtgccac accaattgca atgtagatgg atgaataagt accgaaaccg
     6661 ataccgatca ataatgcaag tgagaaacta tgaagcgttg gaccacctag atagaataag
     6721 gctagtacca caaagagggt ggttactgat gtcattaaag tacgcgaaag tgtttggctc
     6781 aaggaaatat cgataatttc aattgagctg gagcgacgaa ctttagaaaa gttttcacgt
     6841 acacggtcaa acaccacaat tgagtcattt aacgagtaac cgacaacaga taaaatcgct
     6901 gctacaaagg tcaagtcaat ttcaatctgt aagaaagaga agattccgat cgtcactaat
     6961 acatcgtgaa ataaagccac aataccgcct accgctaaac gccactcaaa acgtgttccc
     7021 acgtaaataa gtagcatagc aagtgttgcc aaagtggcat aaatagcccc ttgggttagc
     7081 tcttccccca cgtttgggcc aacgaattca atgctcttga tagtcgcatt cggatctaat
     7141 ttttgatgga tcatctccat cactttattc ccaacagaca tatcaccggc actggcggca
     7201 agtcggatca ttaaatcttt ttgactgcct gtggtttgca ctaaggcatt gccgtagccg
     7261 ctattttcaa gctccgtacg cagttttgct aaatcagcag gttgtgaaaa ttgagtttcg
     7321 attactgtcc cgccggtaaa atctaacccc cagttaaagc cttttgtcgc aatagtaaaa
     7381 atgcataaag cagttacaat cagcgaaaaa atgaatccga catagcggta tttcataaag
     7441 gggattaatt tataaggcag tttaatttct gctacatctt gttgtacatt ttcaatagcc
     7501 atttttccac cttaaatcca aagtttcttc acgcgtttgc caccgtaaac ccagtttaca
     7561 agcattcgag tacctgtaat tgcggtaaac atagaaataa ttacccctaa tgcaagcgtt
     7621 accgcaaagc cttttaccgg acctgtacct acaccataaa gcacaagaga agtcaaaata
     7681 gtggtgaggt tggagtcaaa aatacttgag aatgcgccat tataaccttc gtggattgct
     7741 tgttgaattg ggcgaccgtt acgaatctct tctttgatcc gctcgtagat tagtacgttg
     7801 gcatcaactg acatacccac agcaagtacg ataccggcaa ttcccggcat agtaagggtt
     7861 gcaccgatta atgacattaa accaatcgtt aagatcatat tcacaatcaa ggcaagagag
     7921 gcaaatatac caaatacttt ataaaaggct agacagaaca ggatcgttaa gcctaagcct
     7981 aaaatactag cttccatacc ttgtttaaca ttatctgccc caagagaagc accgatagta
     8041 cgctcttcca caatcacgat tggagcaatc aacgcacctg aacgtaataa taccgcaagg
     8101 ttttgagctt ccgctggtga attaatccct gtaatctgga attgattacc taaacgggtt
     8161 tgaatggttg caacgttaat tacctcttgg tgtttttcta aaatgacttt accgttagca
     8221 tctttacgac ctgaatcttt aaattcggta taaagtgttg ccatcggttt ttggattgcc
     8281 attttagtaa tttcacccat catctcgccg ccttcggtat cgagtcggat actcacttgc
     8341 ggcaagccac gctcatcagt gcctgaggtt gcatcaataa tatgttcacc ccctaacgaa
     8401 ggtttacggc gtaatacaac tggctcgcca tcacgggtgt tttgcagtcc tgaatcagcc
     8461 ggcacaatgc ctttcgccgc agaggccaca ttggcttcgg tattgactaa ccggaactca
     8521 agggttgcag ttgcccctaa aagctctttg gcacgagcgg tatcttgcac acccggtaat
     8581 tcaactacga tacgatctgc accttgacgc tgaatggtcg gctcagaaac gcccaattcc
     8641 tcaacacgtt tacgcaaaat agaaaggttt tgttcgattg ccatcgtgcg agattcagaa
     8701 agagcttgtg ctgatggcgt taaggtgact ttattatcat ttaccaaaat atcaagcgtt
     8761 gggtgagaga gacgcactaa acgcactgct ttttcggcgg tatcgttatc ggcaaattca
     8821 acctcagttg caaaattttc gccttttttg accgcttgat attgcaattt ttctttacgg
     8881 aaatcactac gcaggctgtc ttgcaaagtg tcttgttgtt ttgcaagcgc cgtgttcata
     8941 tccacttcca ttaagaaacg aacaccgcca agcaagtcca agcctcgctt catcgggcta
     9001 ccgccaatgt cagacaacca ctgtggcgtt gctggtgcaa ggtttaaggc aacagagtag
     9061 ttattcccca atgcttctga gattttttct ttggcaggca attgctgttc gctgctttcg
     9121 agacgaacca aaatcgagcc attttctaac acggcagatt tcggctgaat attcattgct
     9181 gaaagtgtgg attgcacttg agacagtgtc tcaggtgtgg cttgttgccc acgagtaccg
     9241 gaaatttgta ccgaaggatc atcgccatat aaatttggaa gggcatataa agcaccaatg
     9301 gcgatcacga agatcaccat taaattcttc catagaggga aacggtttaa cacaataact
     9361 ccccgaatgt taaagttgga taagagggtt gattaaagtg attttaatga accttttggt
     9421 aacaccgcaa caacgaaatc acgtttgatg gtcacttcag ttgtgtcatt taatgcaatc
     9481 acgatgttat cgttatcagc ggtcactttg gtaattttac cgattaaacc accgctggtt
     9541 aatacttcat cgccttttgt caagcttgcc agtaaatcac gttgttgttt ttggcgtttt
     9601 gcctgaggac gataaatcat aaaatagaaa attgcaccga aaataatcag gataaagatc
     9661 atttccattc cgccaccttg ttgcataaaa actccttaaa tgtttgagtg gtataaaaat
     9721 aagtgttata aaaaacgcct gttaaaatac cataaattca atgaattaac gagtagaaaa
     9781 attcatcgaa tgcttttctt ttaaacaaaa atttgagtag aatcagcact tttagtttag
     9841 gattaggttc ttggcgtgtt cttgcgctga cacaatagga gaaaaaatga aaaaattatt
     9901 cgctcaagcg gttatttttg gggctttttt tgcaagttcc gcttttgctc acaatgtgca
     9961 attaaatcaa gcattacctg ctgtttcggt tgcaaaagac ggggaattgg cagtggcagg
    10021 tggaaaggtt agctataaaa attggcattc atcatctctg gcaggtaaag tccgtgttat
    10081 tcatcatttt gccggtagaa gttcggtgaa agaaaaaaat gaagatttga tgacagcaat
    10141 taaaaatgcc ggttttgatc gctcgaaata ccaaacggtg acgattgtaa atgctgatga
    10201 tgcgattgtc ggcacagggg tatttgtgaa aaatagtgtg gaaaacggca aacttgacaa
    10261 tcctcacagc caagtagtgt tagaccagca aggcagtgtg aaaaaagcgt ggggcttaaa
    10321 agagaaagag agctttattg cagtgctgga taaatcgggt aaggtacaat ttacctctga
    10381 gggcaaactc tctgcaaaac agattcaaga agtgattggg ttggtgaaaa cattaacgca
    10441 ataaccagtg tttttatggg cggattttgt atccgcccat cattctagat aataaatcga
    10501 taacttatcg tgtgatgata ctcttctcct gcttttgtta tcccgccaaa ttggagtaat
    10561 tcaggctggt ttagtgaatt tgggaaaaac tcaggctcta atgctacacc agcgtaatct
    10621 tcatattcgc ctttagtcaa attaggttgt ccttttagcc agttgccggt gtaaagttgt
    10681 aatgctggca tggaggtgcg gagttccatt tttaagtctt ccacggctaa acaagcggtc
    10741 ggattttcac tattttttgc aagatgaaag gagtgatcgt aaccttttac cgctttttgg
    10801 tcgtcatcag ccaataaatc ttgcccaatt tttttagcat tgcggaagtc aaaactggta
    10861 ctctccactt ttttcagtgg agcattagga ataccgctgg catcaaccgg taagtatccg
    10921 tctgcattaa ttatcagctc gtgatctaaa atcgtctctg aaccttgcaa attaaaatag
    10981 gcgtgattag ttaagcaaag cggtgtatct tggttagcaa cggcatcaaa gctgatttga
    11041 agctcattct ctgttaagcg atactccaca aaagctttca cttcgccgcc aaatccttcc
    11101 tcgccatctg caaaaaaata actaaatttg accgcttgtt cgctttggct ttcaagttgc
    11161 cacactattt tatctgcccc aagctcgcca ccgtggagat tatgttcacc gttattttta
    11221 gcgagctggt aggttttgcc gtttaagcga tattcggcat tggcaatgcg gttagcgtaa
    11281 cgcccaatgg tcgctccaaa gaaagcggtc tgtttttgcc aattttttgc agacgtggtg
    11341 actaatactt cccgttcctc gttcggcatt ttgacaatgc acgaaagcca agaagcccca
    11401 acatcagaaa gggtaatgcg taaaaacgca ttttcaaggg tgaataattt catcggttga
    11461 ccttaattac ctagcacggc atagccgtac taggttaagc ataattcagc cctgctaggg
    11521 ctgaggttat ttattttaga gtagcggagc tacttcctta tgcttaaccc ggtacgcttt
    11581 agcgtgccgg gcattctcgc accccatcgg aggcagtaca aacgtggaag gtttctttaa
    11641 tgccggtttg cttttcgtaa ttgttagcaa cggcttggcg gagatcttcc actttgtcat
    11701 ttggcactag gcacacgaca caaccgccaa agccgccgcc agtcattctg gctccgccgt
    11761 ttttaccgat agcttgttgg gcgatttcgg ctaagcaatc cacttcaggg caggtgattt
    11821 caaaatcatc acgcattgag tcgtgagatt gagccatcaa ctccccgagt ttgaccatat
    11881 cattcgcttt taaggcctct actgcttcca gaactcgttg attttcgctg atgatatgtt
    11941 ttgctcgttt atacgccagc tcattctctt cactaagttc tgaggctcgt tcaataaatt
    12001 gttccgctgt gacatcacgc aattttgctt tgccgaagaa gtgggcggca aattcgcact
    12061 gttcacggcg actgttgtat tcgccggtaa ccaagtcgtg ttttacgttg gagttaataa
    12121 tcgcaatcga atagccttgt ggcacagggg ttggggtgat ttctaaacta cggcagtcga
    12181 tcatcactaa atgatcttgt tgcccgagag cggaggtgag ctgatccata ttgccgcagt
    12241 tgcagccgac aaatttattc tcagcctctt gcccgattaa tgcgatttgc ggtaaagaaa
    12301 gcggtaaatc gccgagtaat tgagcggttt taccaatcga cacttccaat gcggcggaag
    12361 aacttaaacc tgatgacatc ggcacatcgc tggtaatggc taaatctgct ccttgtttga
    12421 attcggggtg tttggcttga ataaatttca ccacgccacg cacataattc gcccattttt
    12481 gctcgcttgg ctcaatcgcc tggcttaaat caaattcatc ttgttggttg agatcaatgg
    12541 cgaacacccg ccatttgttg tcactacgtt tggcaaagct aaccgctgtg ccgtaattga
    12601 tggcacaagg cattacaaac ccatcgttgt aatcagtatg ttcgccgata atattcactc
    12661 tgcccggggc aaataccgtg cgttctgctt tataaccaaa atgttgttca aattgttgca
    12721 aagcgatttc ttgtggtttc atttcaattc cttatttatc tttatagtgt ttggtatcac
    12781 ttactgcatt taaacgttcg gcagcttgtt ccggggttaa atcacgttgg ctttctgcca
    12841 tcatttcata accgaccata aatttacgca ctgttgccga acgcaagagc ggcggataga
    12901 agtgagcgtg taattgccag tgagcatttt ccttgccgtt aaacggagcg aagtgaaagc
    12961 ccattgaata aggaaagctg atgttaaaca gattgtcgta acgggtggtg agctttttca
    13021 atgcaagggc taaatccgct ttttccgctt cgtttaaatc ggtaatggat ttgaactgct
    13081 tggctttcgg caacagcaag gtttcaaacg gccaagccgc ccagtaaggc acaaccgcaa
    13141 tccaatcttc ggtttctgcc acaattcgct cttgtttgtc taattcacgt tgtgcgtagt
    13201 caagcaacag tggcgagcca tattgagcaa aatatttcgc ttggcattcg tcttcaatcg
    13261 caatttcatt aggtagaaaa ttacttgccc aaatttgccc gtgtgggtga gggttagaac
    13321 accccatcat tgagcctttg ttctcaaaaa tttgcaccca ctgataatgc tctttcagct
    13381 cattcgcttg ctcttgccaa actgttacca catcagtaat ttcctcgatg gaaagttgcg
    13441 gtaaggtttt actatgatca ggcgaaaaac agatcacacg gctttcgcct tgtgtatgag
    13501 aaatctgaaa cagcggatca tcattcggta ttggtgccgg tgtgtctggt agcagggcag
    13561 agaagtcgtt tttaaacaca aacggcttgg tgtaattcgg gttttgttcg ccggtaatcc
    13621 gcttattgcc ggggcagagg taacaacttg ggtcgtagct cggtttttca tcttgcacga
    13681 tttcttcttg ttgcccttgc cacgggcgtt ttgcccgatg cggagagact aaaatccatt
    13741 gattttttaa tggattaaaa cgacgatgtg ggtgatcgtt gaggacaaat tcgctcatat
    13801 aaaactcctc gaaattagtt atgtaaagag tatagcgaaa gtcagacaaa atgactgtga
    13861 catagctcac aaaataatga tgtcaagcgg tcaaatttca gaaaaatttt gcaagttttc
    13921 ctccattttg cgatttaagg tagcttacgt ggaattgaat gtggcttttg gtagaataga
    13981 tgaatatgca agatattaag acaaaaatag atggaaagac tgaataaatt tgatgcttgg
    14041 ttaatgaatc ataaacctaa tgctaggtta agcggagcga gtcgtttgtt gacagagttt
    14101 tggttctttg ggttaaaaga agctagagcc tgtttatttg cgggattatt ttttattgcg
    14161 atgttttcgg taccaaaaac gggattatgg ggcttacctc gttatgatat tttgctgatt
    14221 tttgccatag tggtgcaaat tgcaatggtg aaactggggc tggaaacgtg ggacgagcta
    14281 aaagcaataa gcctatttca tttggttggt tttgtgttag aagtctttaa aacatcgagt
    14341 aatattcaat cttgggcata tccggatttt gcctatacta aattgttcaa tgtgccatta
    14401 tttactggtt ttatgtatgc agcagttggt tcttacatta tccaagcgtg gcggttgttt
    14461 gatttgaaaa ttaaaagcca cctgccctat tggttagcca ctttaacggc actgatgatt
    14521 tacctgaatt tctttacgca tcattacatt ggggattacc gttggtatat tgccgctttt
    14581 gcattagggc tgtatgcacg tacttttgta tttttcaccc cttatgacat tacacgaaaa
    14641 atgccactgc tgctttcttt cttcctgata ggttttttca tttggttggc ggaaaatatc
    14701 ggtacgtttg ccggaatttg gcgctacccg aatcagtttg gggcttggtc tatggtgcat
    14761 atgagcaagt ggagtgcttg ggcgttattg gtgatgatga cttttaccat cattgtgcat
    14821 ttaaagcata tcaagcaaac agtcagagtc tcgagcgatt aacaagctgt gggttttggc
    14881 gaaaatttta ctcatcagtt attttcagtg gaattagggg caaataataa tttgccccta
    14941 tatcaaatta tggattttcc ccttccacat caataatcat cacttccgac tgtgagccta
    15001 accgcatcgg cacgccccag aatccgtagc cggaggtgac aaaataatgc ccgaagccga
    15061 ttttttcata gccgtaatgt aatcgataga tcagtttggt aataatactt gcagggaaca
    15121 cttgcccttt gtgagcgtgt cctgaaactt gaatatcaat cggcaattta gcatgttgct
    15181 caatttcagt cgggcggtgg tcaagcaaaa ttaccggtag tttagtgttc acgttttgta
    15241 aaagctgttc ggcagaaggt cgatttttga ctaaatcatc attacgccca ataagggtaa
    15301 attttccgtt aatttcggcc gtttgatccc ataaaacagt aataccggcg tcggtaattt
    15361 cttttgcaat cgtttcttga gccccaaaaa agtcgtgatt gccaagggta gcatacacgc
    15421 caagaggagc ttttaatttg gctaaatgag gctgcatttt atcggcaaca taaacttcgg
    15481 tattgtcgtc cataatatcg cccggcaata aaatcagatc gactttttgc tggttgaaaa
    15541 tctctgccag ttggtcaagt tgcttggttc cgaacagttt tcctaaatgc agatcgcttg
    15601 ccataccaat gcgaagcggt ttctctaatg gtttatccaa tttcaccgaa taatgtacta
    15661 ctgttggggt ataagcgttg taatagccaa gcccaagtaa gccaaagaat gcaaatgggt
    15721 aggcgatttt cagccagcga ttgacggtag tattgccgtt gaatattttg taaatacaag
    15781 cggtgaaaaa actgataaaa aatgcaaaaa gtaacaatac caatatgaat gccattattc
    15841 taaatagcgc aaaagtacga gtaagatgca aaatcactaa tccgtttgcg actaagaaag
    15901 tgagaatacc aactgtttta cggtttttac ttgataaatt aaataaccag ctgacagtct
    15961 ttgcaaagtt gaataaaaag agttgtaaca ccgcaatcac aagggcggtg gtaatgtagt
    16021 aacgatattc catatttttc cttcaataaa ttggctaaac ccagccgatt tgtcttaata
    16081 aaaataagcc gatgctggca ctaaacattg agccgagagt cgtaatgccg atcagatttg
    16141 cggctgcctc gccgtctccg ccatagttgc gtgtcattgc gtaggtggct gaagcaacgg
    16201 gagcagaagc agccacaaag acaatgccta gttccatcgg cggaagttga aacacaaatt
    16261 tcccgagtag tagcaagaaa attggagcaa aaatcagccg aatcgaggca gaaaacagca
    16321 caattttatt gatggtgctt tccactcctt gattaaattg tttcaactgt ttgaaattaa
    16381 tgcttgctcc ggtgcagata agtgctaatg gtagtgtcag gctcgccatt aatttaccag
    16441 cagactcaag cggggttgga atttggtggc ttaattcaaa atagttaaaa gttaagcctg
    16501 caatgacggc tagaatcagc ggatttctca atatcgacaa tattaatctg ccaaaattca
    16561 cttttttctc gcttaacgat gaagtgaggg taatcactgc aagcacatta aaggtaatca
    16621 ccaagcacga aatataaact gaagcggcag cgagagcttt atcgccataa gcattgagaa
    16681 ttaaggcaat gcctaaaatc gccgcattgg tacggaaagt gccttgagtg aaaatacaac
    16741 gataacggcg gttttcaata tgtcgagccg cccaccattc cgcccataaa tagatcaaaa
    16801 tcgaaccgcc gactccggtc gagatcaggt tgatttggct ggagaaatct aacgggcttt
    16861 ttagcatatt caagaaaatc atcggtggca gggtaaaatt aaataccacc tttgatgcca
    16921 tattgcaaaa ggtatcgtca ataaattttc gtctgcgtgg aaaaataccg aacagcatta
    16981 acaaaatggt tggtaaggta acgccaatgc taaattggat agagtcgaaa agcataatgt
    17041 ttgccttaaa tgatggcacg agtgtctttt gcttgtaccg tagattatca ataaagtacc
    17101 agcgtggacg ctggtactat catcaatgga aatgaaatta caatcctgcc tttaagcttg
    17161 cttcgacaaa tttatccaaa tcaccgtcca gcacttgttg ggtggtgcga tgttccacac
    17221 cggtacggtg gtctttaatc cgtgaatcgt ctagcacata agagcggatc tggctgcccc
    17281 agccgatgtc ggatttgttg tcttccatcg cctgtttttc cgcatttttc ttgctcattt
    17341 ccagctcata tagcttcgct ttaagctgtt tcatcgcctg atctttattt tgatgttgtg
    17401 aacgaccgtt ctggcactgc accacaatgc cgctcggtat atgggtaatt cgcaccgccg
    17461 attcggtttt attgacgtgc tgaccacccg cccctgaggc acgatacaca tcaatccgca
    17521 aatccgcagg gttgatttca atatcaatat cgtcatcgac ttccggataa acgaaagccg
    17581 ccgagaacga ggtatgacga ccgttattgg catcaaacgg gcttttacgc accaagcggt
    17641 gaatacccgt ttcggttctg aaccagccgt aagcatagtc gccggaaatt ttcacggtgg
    17701 cggatttaat ccctgccaca tcaccgtctg aggcttccat tagttcggct ttaaaccctt
    17761 tgctctctgc ccaacgcaaa tacatacgca gtaacatttc tgtccagtcc tgagcttccg
    17821 ttccacccga accggcttgc aaatccaaat agcaatcggc actgtcgtgt gggccgctga
    17881 acatccgctt aaattctaaa tcggcaagtt ttttctctaa ttcgtctgct tccacttggg
    17941 cttcattgaa ggtatcctga tcttctgctt ccaccgccag ctcaatcaac ccttcaacat
    18001 cttcaatccc ttgctctaag gctttaatcg tattgacgat ctgctccaac attgcccgct
    18061 ctttaccaag cgcttgtgct ttttccggct tgttccatac atcgggttgt tccagctcgg
    18121 cattgacctc ttctaagcgt tcgactttat gctcaaagtc aaagataccc cctgatcacc
    18181 gcggtgcgct cgcttaaatc agttagttgg tttttaattg ggtttaattc aaacattgtc
    18241 gttcctgttt ttgcttattt taaaaagatg aattatagct gaagttaagc aagcggtcga
    18301 attttgcaag aaatggagca atgatcgttt ctagtaatga gatttggttc ataaaagttg
    18361 caactgtttc tgctatttgg ctttgatagc taaaaatctt taaaaaaaca agcggtcgtt
    18421 ttaccccatt ttttgcaaaa cgaccgtagc ttcttgctat aatcgctgaa aaaatgctgc
    18481 aaggagattt tatggcaaag cgcccaagtg atattgatgc aaccctattg caactggaaa
    18541 tcctacgccg tatccccaaa ttacccgcta aaattgatgc taaaagtttg caccaacagc
    18601 tattagatgc cggctttgaa cgggatattc gcactgttca gcgttcgctc aaaatgttat
    18661 gcgagcattt tgatattgaa tgcgatgagc ggagcaaacc ctttggttat agctggaaaa
    18721 tccgctcaga ggggctggca ttgccgattc tcaacgaaca acaatcatta ctgctaaaac
    18781 ttgccgagca acagctgaaa tatctgttac ccgcaaattt aatggcatca atgaaaccct
    18841 tttttgagca ggcagacaga atggtttccg gggcgaaaga caagcccgaa taccaatggc
    18901 taaataaagt ttgctccacg ccaaccagcc taccgctgat ccctgcaaaa attaaagaag
    18961 agatttttaa ttccgtaagc caagccttat ttcaaaataa gttgttaaag atcgaatatc
    19021 agaaccagca cggcaaaaaa caccaagcga caattatgcc gttggcgatt tcacaacaag
    19081 gtgcgagcat ttatttggtc tgccgttacg aagggtttga cgacaaccgc ctgttggctc
    19141 ttcaccgcat tcgtaaagcg gagatttcta cttttagttt tgaacgcccg aaagatttta
    19201 atttgcaagc ctaccaagat gccggacacc tcggttttgg caatggcgaa aaagctagcc
    19261 ttaccttttc gattagcaga gacgccggtt tccatttaac cgaaacaccg cttgccaaag
    19321 atcaaaaaat tctcgaggag agtgaaactc actaccgtat tcaagccata gtcgctgata
    19381 atgatatgct aacctggtag ctacgcaaat ttggcgaaga tatttgggat atcgagaaag
    19441 aagcgctaaa ataagctaaa caagcggtcg gttttgtggg aatttttgct aaatagtatc
    19501 gaccgctcct ccctaaacag acctttatca taaatacaac tctttcaatc agatattctt
    19561 actgtctatt gatgaacgat tcgaattttt ctagtggttg aaatttaaac taattttctt
    19621 gctttttggc atttttcaga cttttaattc tctccattag cctgtttttt tacgctcttt
    19681 ttcataaaca ggaataacca atgccttttc aacttacttt ctgccaacaa gccggcaatc
    19741 agcaccagaa aaatcaagat gcactgttta acggcaaagc ggtgtaccaa tggcaactta
    19801 aaaatgccga gagttatctg ctggataacg acaaagtaat ttttggggtt gcggacggcg
    19861 tttccagcca ccctcgaaat catcttgcct cacattattt aatggcgtta ctcagccaat
    19921 gccaatccct tgatagccaa tggttgcgac aggctcacgg cgatttttgc gaaaaattag
    19981 cgaaagatta ttttggtgct tcttgcactt ttgttgcttg tgaattacac cataacggca
    20041 gagggcgtat ggttaatgtg ggcgacagtc gagcctataa aattacggca aacggggagt
    20101 ggcaacaact gagttttgat cacaccatac tggctgaaat gaaacagaaa ggcttggtta
    20161 aggaagggag caactatgcc tcaatgtata acggcttaac cgattgtatt gttgccgatt
    20221 ttgacgccga tgatttccgc attcatatag ccgaatttca actggaaaaa ggcgagagca
    20281 ttttgctctg ttctgacggt ttgcacgaac aactcgcccc agaagctatt caggcgattt
    20341 aggacggata cgaaagcccg tctcatcgtc tgcaaatttg cagaaaaatg gtaaaaatgc
    20401 accgcttgta tgacgatttt tctgcggtga tttgtgaaat tgtgtaatta aaacgacatt
    20461 atttgtcgca ttggtgctta aaatccgcat aaaacagagg agaaaaaaat gaaaaacgat
    20521 ttccattatg ccgctgaatt aatccgcaat gcagacggca ttttaattac cgcaggggct
    20581 ggaatgtcgg tggacagtgg cttgcccgat ttccgtagcg tgggagggtt atggaattcc
    20641 tacccaccgc tcaaaaaatt taatttgcaa tttatgcaga ttgccacacc gcttgcctat
    20701 caggaacgcc ctga
//
LOCUS       DANLXO010000037        20653 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.037, whole genome shotgun sequence.
ACCESSION   DANLXO010000037 DANLXO010000000
VERSION     DANLXO010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20653
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.037"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..487
                     /gene="secB"
                     /locus_tag="PXD69_001152"
     CDS             <1..487
                     /gene="secB"
                     /locus_tag="PXD69_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HDL6283361.1"
                     /translation="QVASTEETTQTPFELQIQRIYVKDVSFEAPNLPTIFQQEWKPQL
                     GFELDTETKEIGEDLYEVTLHITVQTTLEDSNDVAFICEVKQAGVFTIKGLEGIQLAH
                     CLASQCPNVLYPYARELISSLVNRGTFPALNLSPVNFDALFMDYLQRQEESAEEPALA
                     N"
     gene            594..1604
                     /gene="gpsA"
                     /locus_tag="PXD69_001153"
     CDS             594..1604
                     /gene="gpsA"
                     /locus_tag="PXD69_001153"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDL6283362.1"
                     /translation="MSEIYSAPITVLGAGSYGTALAIALSRNGHKTYLWGHNPDKMAV
                     LASERMNQDFLPDIVFPEALEIVADLATAVQKSKDLLIVVPSHVFSEVLAQIKPFLSQ
                     DHRIMWATKGLERDTGRLLQTVAKEILGEIYPLAVLSGPTFAKELAAGLPTAISLAST
                     DPVFADQMQKRSHCSKAFRVYLNNDIIGVQLGGAIKNVIAIGAGISDGMGFGANARTA
                     LITRGLAEISRLGVSLGADPKTFTGMAGLGDLVLTCTDNQSRNRRFGLALGQGKSAEV
                     AIAEIGQVVEGFYNTKEAYLLAQTQGVEMPIVEQIYQMLFCGKQASDVVKTLLGRERK
                     GE"
     gene            1620..2435
                     /gene="cysE"
                     /locus_tag="PXD69_001154"
     CDS             1620..2435
                     /gene="cysE"
                     /locus_tag="PXD69_001154"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDL6283363.1"
                     /translation="MQQSEINQIWQAIRDEAKELANCEPMLASFFHATILKHHNLGDA
                     LSYILANKLENPIMPAIALKEIIEEAYRAEPQIIASAACDINAVRTRDPAVDKWSTPL
                     LYLKGFHALQSYRVTHYLWNQGRKALAVYLQNEISVAFDVDIHPAAKVGCGIMFDHAT
                     GIVVGETSVIENDVSILQGVTLGGTGKENGDRHPKIREGVMIGAGAKILGNIEIGRYS
                     KIGANSVVLQPVPDHATAAGVPARIIGKSSEQKPAFDMNQYFEDEQGLFGDGI"
     gene            2484..3095
                     /locus_tag="PXD69_001155"
     CDS             2484..3095
                     /locus_tag="PXD69_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6283364.1"
                     /translation="MQLTFNDFQNYYNGKGDLTMFSFYGKKTWENGIYVGIDGSIGRA
                     NNKLSHQSQTIKLARNVYSLGLTVGKTLEVASFNLQPSFGMRYHHLTSANAQLENTKF
                     ETDRVDLLAIQAGLALNKTFIFNELKVKPELGSYFVDASHGTLKTKLNEFSLNQNIGR
                     YFKQEVGITLHYKGVSSSVHAGFTKGNTLQEQKFISLKVGYEW"
     gene            complement(3635..4327)
                     /locus_tag="PXD69_001156"
     CDS             complement(3635..4327)
                     /locus_tag="PXD69_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL6283365.1"
                     /translation="MTELTPKQEAFCFAYIETGNASEAYRQAYETEDMKSETVHRKAK
                     ELMDNGKITARIEELKAEHAERHKLTVDDLLKELEEARILAREKENPNAMTQATMGKA
                     KLLGLDKQVTDPCFDGETGKGDMILSVNCSSIKDGKALDETCILKAGTHEFITRDSFI
                     FYRHIRIDSLDEIKANIEAGYFIQKALINDEAYQQILKGVLSSKSVTPRYKRFLKNAI
                     RQSACPDILAEP"
     gene            complement(4324..4749)
                     /locus_tag="PXD69_001157"
     CDS             complement(4324..4749)
                     /locus_tag="PXD69_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283366.1"
                     /translation="MKHELNLAGITALMNEPIKATLSFLDFPHIRIERLHHDNGRPFF
                     IGVLSLDLEDHINIEMAGATGFLEALAIIAYHQQLTATPLLVNDDLLSEINKLPHPQR
                     TNPFIDRHGNEITREQMSKEYREKIDYAFAEKRMAEGKE"
     gene            complement(4756..4908)
                     /locus_tag="PXD69_001158"
     CDS             complement(4756..4908)
                     /locus_tag="PXD69_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283367.1"
                     /translation="MPELLIVLGNRIAKLEQQHNAMPSETDSITLGILRKQLSQLLKV
                     AERIKE"
     gene            complement(5069..5755)
                     /locus_tag="PXD69_001159"
     CDS             complement(5069..5755)
                     /locus_tag="PXD69_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283368.1"
                     /translation="MADHSQFISRLENRIEPKISFQELIQELSNYTNKPFSHIADKLK
                     SLIFSFQQNGIYTNAFVNCTLFEDGESYAIEPKTLHFKDAFDQPKGVLSDVIAQNSID
                     VEHLNAYYVTAREITQLIKTQSPTLLDKLTTKQTQSEISQIQNDYISVYDFIEWASKH
                     YSSLSETANDLNRLLKDKNIQLYRQYGGISPSIDKDNTNLKAAFDFVAINNGYEKQSS
                     SFNFDDDIPF"
     gene            complement(6150..6473)
                     /locus_tag="PXD69_001160"
     CDS             complement(6150..6473)
                     /locus_tag="PXD69_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL6283369.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNDVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            complement(6586..6804)
                     /locus_tag="PXD69_001161"
     CDS             complement(6586..6804)
                     /locus_tag="PXD69_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module killer protein"
                     /protein_id="HDL6283370.1"
                     /translation="MMREQTTNQIIITDNFSKWLENLKNPIAKATVARRIKNAINGNF
                     GDHKSLAGTGGLYEMRIATGAGYRIYYA"
     gene            complement(7079..8305)
                     /locus_tag="PXD69_001162"
     CDS             complement(7079..8305)
                     /locus_tag="PXD69_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6283371.1"
                     /translation="MARKITPLNDTQIRKAKPEDSPLRDGNGLLLVITSNSKLWRFRY
                     ERPFTKKRNDLSIGAYPDISLAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISN
                     TYENVAWAWLEHRKTKKNFSDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQ
                     YQDEGKLEKLKRAIQKHNEIMMFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDL
                     GEFLYTLQNAQIHLQTRYLILWQLLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRG
                     IEHKITLSRQAIALLREIKKLSGGKTYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLV
                     AHGLRAIASTYLNEKGYNSDLIEVALSHLNSDRIKAAYDRGERLEQRFKLLQVWADFV
                     EECSQGSLPQYHLKIA"
     gene            complement(8580..8946)
                     /gene="ssrA"
                     /locus_tag="PXD69_001163"
     tmRNA           complement(8580..8946)
                     /gene="ssrA"
                     /locus_tag="PXD69_001163"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            9112..10071
                     /gene="rpoH"
                     /locus_tag="PXD69_001164"
     CDS             9112..10071
                     /gene="rpoH"
                     /locus_tag="PXD69_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HDL6283372.1"
                     /translation="MKKFNENEIEDAEIIDAEPIDVDEIDEEETSVEAMHPALVSGSM
                     PVPQGNLDSYIRMANQYPILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARG
                     YLGYGLPLADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVK
                     VATTKAQRKLFFNLRKNKNRLAWFNEEEIKKVADDLGVSVEEVREMESRMTGQDLGFD
                     LPAGDDDEDSYAPSMYIEDSSSNFADDLEDEQHNGQATAQLAYALATLDERSQDIIKT
                     RWLDDNKATLQDLADKYNISAERVRQLENAALKKIKEAISLDG"
     gene            10237..10530
                     /locus_tag="PXD69_001165"
     CDS             10237..10530
                     /locus_tag="PXD69_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3144 domain-containing protein"
                     /protein_id="HDL6283373.1"
                     /translation="MTQLSTSVYQRADGFINVANAHLKNIAPNQVSNAMLFGCARFNA
                     YVAASKAEYKQQLADSREEVIQYFVEQYKEMLTANLDEYIQNFERYIEGKKAD"
     gene            complement(10548..10850)
                     /locus_tag="PXD69_001166"
     CDS             complement(10548..10850)
                     /locus_tag="PXD69_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL6283374.1"
                     /translation="MNTYNNTLNNKNLEKKQLLMAIQAIPASQDFIWDGKDDDERPVT
                     PSEFSIAMKKRGRPAGSKKELVSLRLDKSVLEAFRASGKGWQSRINQVLSDFVKQV"
     gene            complement(10822..11112)
                     /locus_tag="PXD69_001167"
     CDS             complement(10822..11112)
                     /locus_tag="PXD69_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL6283375.1"
                     /translation="MKIYTWDETKRKINLAKHGLDFADADEVLSSPYRFDVEVIRNNE
                     FRIQSFAYSFGRLLVLSLAYTEREDYIRVISFRRASKAEREAYYEYLQQYFE"
     gene            complement(11250..11789)
                     /locus_tag="PXD69_001168"
     CDS             complement(11250..11789)
                     /locus_tag="PXD69_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDL6283376.1"
                     /translation="MLDLTKIKLVITDVDGVLTDGGMYYTDQGEVMKRFHVHDGLGVK
                     MLQSCGIKVAVLSGGDTALLRKRLEVLKIDLALLGKMEKRSACFELMQQAGVTPEQTA
                     YIGDDTLDLPAFEVCGIAIATRNALDYIKEKADWVLQKAGGEGAFREVSDQILEAQGF
                     GEIFKTADGFLTVAGKMAQ"
     gene            11860..12537
                     /locus_tag="PXD69_001169"
     CDS             11860..12537
                     /locus_tag="PXD69_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDL6283377.1"
                     /translation="MSIAENLSQIHQQIQQISEQYQRDNVRLLAVSKTKPVEAIQAAI
                     EAGQRAFGENYVQEAVEKIEFFANRPELEWHFIGPLQSNKTKLVAAYFDWIQTVDRLK
                     IAERLNEQRPADKAPLNVLIQINISDEASKSGIEPDEMLPLAQAISQLPNLKLRGLMA
                     IPKPESEPEQQKVAFRKMQLLFNRLQTEFDDIDTLSMGMSDDMQAAIECGSTMVRIGT
                     AIFGARR"
     gene            12722..14569
                     /gene="typA"
                     /locus_tag="PXD69_001170"
     CDS             12722..14569
                     /gene="typA"
                     /locus_tag="PXD69_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDL6283378.1"
                     /translation="MQNVDISKLRNIAIIAHVDHGKTTLVDKLLQQSGTFGETRGDVD
                     ERVMDSNDLEKERGITILAKNTAINWNGYHINIVDTPGHADFGGEVERVLSMVDSVLL
                     VVDAFDGPMPQTRFVTQKAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGASD
                     EQLDFPIIYASALNGVAGLEHEDLAADMTPLYEAIVKHVQPPQVELDAPFQMQISQLD
                     YNNYVGVIGIGRIKRGSVKPNQAVTIVDSEGKTRQGRIGQVLGHLGLQRFEATEAFAG
                     DIVAITGLGELNISDTICDINAVEALPALSVDEPTVTMFFCVNTSPFCGQEGKFVTSR
                     QILERLNKELVHNVALRVEETSNPDEFRVSGRGELHLSVLIENMRREGYELAVSRPKV
                     IYREEDGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGEVRDMIPDGKGRTRLEYVIPS
                     RGLIGFRNEFMTMTSGTGLLYSTFSHYDDVKPGEIGQRKNGVLISNATGKALAYALFG
                     LQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKKLTNMRASGKDDAIVLTTPV
                     RFTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKRASRTTTSTSTH"
     gene            complement(14618..15055)
                     /gene="rimI"
                     /locus_tag="PXD69_001171"
     CDS             complement(14618..15055)
                     /gene="rimI"
                     /locus_tag="PXD69_001171"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDL6283379.1"
                     /translation="MIEQIQAEDFEQLFEIEQQAHLVPWSKGTLLNNQGEKYLNLKVV
                     EQNKIVAFAISHIVLDEATLFNIAVAPDFQGKGIGKRLLSELILQLQQRKLTTLWLEV
                     RESNHSARKLYDSLGFNEVTTRKNYYPTPNGSKENAVVMALYL"
     gene            complement(15048..15470)
                     /locus_tag="PXD69_001172"
     CDS             complement(15048..15470)
                     /locus_tag="PXD69_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HDL6283380.1"
                     /translation="MNRRDLLLQEMGISQWVLTNPQVLKGDAQIRLNNAVKLVVVCEE
                     DHQHSRLFADILRALKLKNSEYQWLTGEQSQRLVFEHSPIFWLIQAEEQAVKMAKSFT
                     NQTAWKNESWQDLAKSTTKRQLWQQIDTFSAQFGEQRD"
     gene            15600..16589
                     /gene="rsmC"
                     /locus_tag="PXD69_001173"
     CDS             15600..16589
                     /gene="rsmC"
                     /locus_tag="PXD69_001173"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HDL6283381.1"
                     /translation="MLSLESEVLERHLALFENKSVLLFGDVRDDFARQLQSRAEKVAV
                     FSSYFDYARHHSEVEFGLECGLSAELAVFYWTKNKQECQFQLLQWLSQCQAGQEMLII
                     GENRAGVRSVEKLLEPFGNIAKIDSARRCGLYHFELQTVPTFDCKKFWKSYRLQDLDV
                     FDLPAVFSSAELDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGATLKQQFPKIKLTM
                     SDIHAMALESGRRTLAENQLEGEVVASDVFSHINERFDLIVSNPPFHDGVDTAYRAVE
                     ELIFQAKNHLTKGGELRIVANAFLPYPDLLDKAFGKHDVLAKSTKFKVYSART"
     misc_feature    16719..16841
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            16863..17240
                     /locus_tag="PXD69_001174"
     CDS             16863..17240
                     /locus_tag="PXD69_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HDL6283382.1"
                     /translation="MKNPIEIYQSQDGKTQVSVQFDKETVWLSLQQMADIFGRDKSVI
                     SRHLRNIYQEGELEREATVAKNATVQIEGAREVVRLKDYLVKGYALNERRLQERGIEF
                     EQVIGLLSQYTGCLSLVGGRKFA"
     gene            17307..17747
                     /locus_tag="PXD69_001175"
     CDS             17307..17747
                     /locus_tag="PXD69_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6283383.1"
                     /translation="MSINISPLASKNLTEWKLLWQQYLDFYQVNLADDIIQSTWQKVS
                     ESENVKGFGAFVDNRMVGFVHIVIHPNTWNLTECCYLEDLFVLAEYRNQGIGKELIEY
                     IYRYAQEKGYNRVYWVTDKNNHQAQQLYNKLANDSGIIQYRKNF"
     gene            17777..18844
                     /gene="hisC"
                     /locus_tag="PXD69_001176"
     CDS             17777..18844
                     /gene="hisC"
                     /locus_tag="PXD69_001176"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL6283384.1"
                     /translation="MTISQLSRKNIQALTPYQSARRLGGSGDVWLNANEYALSPNFDL
                     TDRTFNRYPEPQPQAVIEGYARYAGVAPENVLVSRGGDESIELIIRAFCEANDSILYC
                     PPTYGMYAVSADTCGIATKTVPLTADFQLDLAQIKANLEGVKVVFVCSPNNPTGNLIK
                     RSDLFELLQITAGKAIVVVDEAYIEFCPEARLVSELANFPHLAIIRTLSKAFALAGLR
                     CGFTLANAELIGVLQKVIAPYPLPVPVSDIAAQALSPQGIEQMKTRVAEVITLRAELQ
                     KNLENLPLVEQVFDSEANYLLFKCQDGQKVFKALWEQGIILRDQHKALGLQNCIRITV
                     GAREENLRVVEAITALSQFQR"
     gene            19029..20117
                     /gene="hisB"
                     /locus_tag="PXD69_001177"
     CDS             19029..20117
                     /gene="hisB"
                     /locus_tag="PXD69_001177"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDL6283385.1"
                     /translation="MQPTLFIDRDGTLIDEPKTDFQIDSLEKLKFEKNVIPALLKLKG
                     KYRFVMVTNQDGLGTSSFPQADFDKPHNAMMALFNSQGIEFDDVLICPHKPEDGCDCR
                     KPHTKLLQKYIDRQLFDPANSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKL
                     LGEAVTNIGERPKRFAEVIRKTKETDIKVQVWLDETGNNEISTGVGFFDHMLDQIATH
                     GGFRMNITTKGDLWIDEHHTVEDTALALGTALKQAIGDKRGIARFGFVLPMDESRAEC
                     AMDLSGRPFIKFKADFKRDKVGDFSTELTEHFFQSIAFTMLATLHIKAKGDNDHHKIE
                     SLFKVFGRTLRQCIRIEGNELPSSKGVL"
     gene            20212..20496
                     /locus_tag="PXD69_001178"
     CDS             20212..20496
                     /locus_tag="PXD69_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283386.1"
                     /translation="MIREVIDFIKNNKWYVLLVVLLLGLYFYQFHGGLSSDSEKWDHF
                     GSYIGGIFSAVTLLSVLHGMQLERKRFKEQKEEFENDKRVLEKRRRKEDF"
BASE COUNT         5966 a         4089 c         4498 g         6100 t
ORIGIN      
        1 tcaagttgca tcaacagaag aaactacaca aacccctttt gagcttcaaa ttcaacgcat
       61 ttatgtaaaa gatgtttcat ttgaagcacc aaatttaccg actattttcc aacaagagtg
      121 gaaaccacaa ttaggctttg agttagatac tgaaaccaaa gaaattggtg aagatttata
      181 cgaagttacc ttacacatta cggtgcaaac tacgttagaa gacagcaatg atgtcgcttt
      241 catttgtgaa gtaaaacaag caggtgtgtt tactattaaa ggtttagaag gcattcaact
      301 tgctcactgc ttagcttcac aatgtccgaa tgtgctttat ccttatgctc gtgagctaat
      361 ctcaagcctt gtgaatcgtg gtacattccc ggcattaaat ctctcaccgg taaactttga
      421 tgcgttattt atggattatc tccaacgcca agaagaaagt gcagaagagc cggctttagc
      481 gaactaagca ttttagatag aaaataggta tgcaaggcat acctattttt ttacaagcgg
      541 ttattttttc tactattttt tgcaattttc taaataagcc gaacagagga aatatgagtg
      601 aaatctattc tgccccaatc acggtattag gtgcaggttc ttatggaaca gctttagcca
      661 ttgccctttc tcgaaatggt cacaaaacct atttatgggg gcataatccc gacaaaatgg
      721 ccgttttggc atcagagcga atgaaccaag attttctgcc tgatattgta ttcccggaag
      781 ccttagaaat tgtcgcagat cttgctacag cggtacaaaa atcgaaagat ctgctgattg
      841 tggtgccaag tcatgtattc tctgaagtat tggctcaaat caagcctttt ttgtcccaag
      901 atcaccgtat aatgtgggca accaaagggc tggagcgaga taccgggcgt ttgttgcaaa
      961 cggtagctaa ggaaattttg ggggaaattt acccgcttgc ggtgctttcc ggtccgactt
     1021 ttgccaaaga actggcggca ggcttgccaa cagcgatttc gcttgcctca actgatcctg
     1081 tttttgccga tcaaatgcaa aaacggagtc actgttccaa agcgttccga gtttacctca
     1141 acaatgatat tatcggtgtg caactcggtg gggctattaa aaatgtgatt gcaattggtg
     1201 ccggtatttc agacggaatg ggattcgggg cgaatgctcg taccgccttg attactcgag
     1261 ggctggcgga gattagccgt ttgggtgttt cgctcggggc tgatccgaaa acctttaccg
     1321 gaatggcggg gcttggagat ttagtgctga cgtgtaccga taaccaatcc cgaaaccgcc
     1381 gatttggttt ggcgttaggg caaggaaaat cggcagaagt cgcgatagcg gaaatcggtc
     1441 aagtggtaga aggattttat aataccaaag aagcctattt gctcgctcaa acacagggcg
     1501 ttgaaatgcc gattgtagaa caaatttacc aaatgttatt ttgtggcaaa caggcttcgg
     1561 atgtggtgaa aaccttgttg gggcgtgaac gaaaaggcga ataaagaaag gagaataaaa
     1621 tgcagcagag tgaaattaat cagatttggc aagcaattcg agatgaagcc aaagagctgg
     1681 cgaattgtga acctatgtta gcaagttttt tccacgctac cattttaaaa caccataatc
     1741 taggcgatgc gttaagttat attttggcga ataagttaga aaacccgatt atgccggcaa
     1801 tcgccttaaa agaaattatt gaggaagctt atcgagcaga gccacaaatt attgctagtg
     1861 cagcttgtga tattaatgcg gtcagaacta gagatcctgc ggtggacaaa tggagtacac
     1921 ctctgctgta cttaaaaggc ttccacgctt tacaaagcta tcgggtgacg cattatcttt
     1981 ggaatcaagg caggaaagca ttagcggttt atttacaaaa tgaaatttct gttgcctttg
     2041 atgtggatat tcatcctgcg gcaaaggtcg gttgcggaat tatgtttgac cacgccaccg
     2101 gtattgtggt gggtgaaacc tctgtgatcg aaaatgatgt ctcgatttta caaggtgtaa
     2161 cactaggcgg tacagggaaa gaaaatggcg accgccaccc gaaaatccgt gaaggcgtga
     2221 tgattggagc cggtgcaaaa attctcggta atattgaaat cggacgctat tctaaaatcg
     2281 gggcaaattc agtggtgcta caacctgtgc ctgatcacgc cacagcagca ggtgtaccgg
     2341 ctcgcattat cggcaaatcc tctgaacaaa aaccggcttt tgatatgaat caatactttg
     2401 aagatgagca aggtttgttt ggtgatggga tttaggtaag agttattcct ttaatttatg
     2461 atttagacat tgctaagtac aagttgcaat taacctttaa tgattttcag aactactata
     2521 atggtaaagg ggatttaact atgttttctt tttatggtaa gaaaacatgg gaaaatggca
     2581 tttatgtagg gattgatggt agcattgggc gtgcgaataa caaattaagc catcaaagcc
     2641 agacgataaa actagccaga aatgtatatt ctttaggatt aacggtaggt aaaacgttgg
     2701 aagttgcaag ttttaaccta caaccgtcat ttggtatgcg ctatcatcat ttaacatctg
     2761 caaatgccca attagagaac acaaaatttg agactgatag ggtagatctt ttggccattc
     2821 aagctggttt agcattaaat aaaactttta tatttaatga attaaaggta aaacctgaat
     2881 taggaagcta ttttgttgat gcaagccacg gaacacttaa aactaagtta aatgaatttt
     2941 ccttaaatca aaatataggc cgttatttta agcaagaagt agggattaca ctccactata
     3001 aaggggtatc aagttcggta catgctggct ttacaaaagg aaatacatta caagaacaaa
     3061 aattcatttc actcaaagtt ggatatgagt ggtaagcttt atgtaacctg aagctacact
     3121 tgaatcggtt caaacataat gttactaaaa aagccttgaa acattgattt tcaaggcttt
     3181 ttaggtatcg gttgaaccgt ataggattat aatttggtgc tggggtcatc tgaattgtat
     3241 cacttcaagc attgataaat aagggttttg gttaattcaa attttatttg tactcctaaa
     3301 tatactccta aaattcaaag tgccttattg cttaggctat tttgtgtaca attattcgga
     3361 tcgtgtatag ggaaatttag ttcgtagttt tctatagtag tttaagttta taaagaaaaa
     3421 atttaaaact ttttgaaatt ttacccactt tacccactga tttgttggaa gccttgatat
     3481 ataaggcttt atagccagtg ggaagcaagt gggttacagt gggttaagtg ggtaactttg
     3541 atttttaccc actgttagcc acttttagag gggaaatatt agcggttttg gtagtggtta
     3601 aagggcaaaa aaggccttaa ttctcatcaa cggcttaagg ttcggctaga atatcagggc
     3661 aagcactttg gcggattgca ttttttagga agcgtttata tctaggcgtt actgattttg
     3721 acgatagtac gccttttagt atttgttgat aggcttcatc attaattagg gctttttgaa
     3781 tgaaataacc ggcttctata tttgccttaa tctcatctaa cgaatcgatt cttatatggc
     3841 ggtagaaaat aaagctgtcc cgtgtgataa attcgtgtgt tcctgccttt aaaatacaag
     3901 tttcatcaag tgctttcccg tctttaatgc ttgagcagtt tacacttaaa atcatatctc
     3961 ctttaccggt ttcaccatca aagcacggat cggtaacctg cttatccagc cctagcaact
     4021 tcgctttgcc cattgtggct tgagtcattg cgttagggtt ttctttctct ctcgccagta
     4081 tacgagcctc ttccagctcc tttaaaaggt catcaacggt taatttatgg cgttctgcgt
     4141 gttcggcttt cagttcctca atccttgccg taatcttgcc gttatccatt agctctttag
     4201 cttttcggtg gacggtttcg gacttcatat cttcggtttc ataggcttgg cggtaggctt
     4261 cgctagcatt gccggtttca atataagcaa agcaaaaagc ctcttgtttt ggtgtgagtt
     4321 cggtcattct ttcccctccg ccattcgctt ttcagcaaag gcataatcga ttttttctcg
     4381 gtattctttg ctcatctgct cccgtgtaat ttcgttgccg tgtcggtcaa taaatgggtt
     4441 tgttcgttgt gggtggggga gcttgttgat ttcactcaat aagtcatcat tcactaatag
     4501 cggcgtggcg gttagctgtt gatgataggc aataatcgct agagcctcta aaaagcccgt
     4561 agcccctgcc atttcaatat tgatatgatc ttcaaggtca agagaaagca caccgataaa
     4621 aaacggtctg ccgttatcgt ggtgcagtcg ttcaattcgg atatgcggaa aatctaaaaa
     4681 gctcaaggtt gctttgatag gttcattcat taaagcagta atacccgcta aattaagctc
     4741 gtgtttcatt ttggtttatt cctttattct ttccgccact tttaacagtt ggctaagttg
     4801 ttttcttaaa atgccgagtg tgattgaatc ggtttcgctt ggcattgcgt tatgttgttg
     4861 ttccagcttc gctattcggt tgcctagcac aattaaaagc tcgggcaatg ggtaagctcg
     4921 gtttcagaat agaggcttaa aaacgtgaat agtctgctaa ataatcaggt gttatctcag
     4981 aaaaatcgag ctttttccct agtgctgctt ctaattcttg tttatttaaa agtaaatttt
     5041 ggaaatcatt taaattcatt gctgccacct agaacggaat atcatcatca aaattaaagc
     5101 tgcttgattg tttttcatat ccgttattaa ttgctacaaa atcaaaggct gcttttaaat
     5161 tagtattatc tttatcaatg cttggactta ttccgccata ttgtcgataa agctgtatat
     5221 ttttatcttt gagtaagcgg tttaaatcgt tagctgtttc actaagactt gagtaatgtt
     5281 tacttgccca ttctatgaag tcataaacag aaatataatc attttgaatt tggctaatct
     5341 ctgattgtgt ttgcttggtg gttaatttat ctaacaaggt tggcgattgt gttttaatca
     5401 gctgtgttat ttctcttgct gttacgtaat aagcatttaa atgttcaaca tcaatagaat
     5461 tttgagcaat aacatcactt aaaacgcctt taggctgatc gaaagcgtct ttgaaatgta
     5521 gtgttttggg ctcaatagca tagctttcac catcttcaaa gagagtgcaa tttacaaaag
     5581 cattcgtata tattccattt tgctgaaagg aaaaaatgag gcttttcaat ttatccgcta
     5641 tatgtgaaaa aggtttattt gtatagtttg ataattcttg tatcagttct tgaaagctga
     5701 ttttgggctc aatacgattt tcaagcctag aaataaattg actgtgatct gccataagcg
     5761 cccctttaac gtatcccttt actgtgagag cgtggaaaga gaaataaagg gctttctcct
     5821 ttcgtgccgg ttaattactc cgccactatc cacgctaatt tgaataaatc cgtatagtta
     5881 cggattgaac ttgataggtt gtattttgct aattattcag ataaattaca agtaataagc
     5941 tgtgttttat tacagtaaat caaaataggc taaagatggg tttccggacg ctataaaaaa
     6001 gagcattcaa gcggtcatat ttcattaagg ttttgcgaat agtgcggaat tttcggagca
     6061 gtacgcacgc aaggagcaaa taaaaagccg tcaatatcca tcaacggcta tttaaaagtg
     6121 aggttttgac aggtagcaag tgataagttt tagccatttt tgacttgtgg aataagcact
     6181 aaattgaatg cccctagaat tttttgaata gtgtcaaagc gtggtttgct gcctttggct
     6241 agggttttat ataggctctc tctgcctagc cctgtttgct tggccagctc cgccattcct
     6301 cttgctcttg ctacatcgtt caaggcttct aaaaattcgt cttggtcgcc ctcttttaac
     6361 acttccgcta aataggcttg aatagttgcc tcatcggtta aaaactccgc cacgtcaaaa
     6421 gggcgtaaac cgtgcttttc tgctgcctgt tcattgattt gtattgtttc cattgctttc
     6481 tcctgtagtt tttaattcag cccataatgc tttcgctttc tctatatcgg cttgctgtgt
     6541 tgatttatcg ccgccgtgta acaagatata aattacattt ccttgttatg cgtaataaat
     6601 tctatatccg gctcctgttg ctatccgcat ttcataaagt ccgcctgtac cggctaaaga
     6661 tttatgatcg ccaaagttgc cattaatcgc attttttatc cgtcttgcta ccgttgcttt
     6721 tgcgataggg ttctttaaat tctcaagcca ttttgaaaaa ttatcggtaa taataatttg
     6781 attagtggtt tgctctctca tcattgccgg cttcttattc tatttattgc ttattgtatc
     6841 cattaagata cagtgagcaa gggtttttgc catttaccca cttttaaccc actttaccca
     6901 ctgtcatttt ttctttattt ttcagttagt tataaaaaaa taatagtgaa aagtgggtaa
     6961 agtgggtaaa aatcgaaaag tttacagaat tttcatcaag gggaattacg ggcataaaaa
     7021 agccgtcagg cggtttacct aacggcatta caagcggtca tttttggcgg aaaatttact
     7081 aggctatttt caaatgatat tgcggtaagc taccttgcga acattcctct acaaaatccg
     7141 cccacacttg gagcagttta aaacgttgct ctaggcgttc gcctctatca taggcggctt
     7201 tgattcggtc gctgtttaaa tgcgataagg caacctcgat taaatcgcta ttgtagcctt
     7261 tctcattaag ataagtggag gcgatggccc gcaagccgtg agccactaat ttgcccttgt
     7321 agcccattcg tttgatcgca ccgttggcgg tttgagtatt gacgtgcgtt tgtgggttct
     7381 tcacgctagg gaataaatac gttttaccgc cacttagctt tttaatctct cgcaaaagtg
     7441 cgattgcttg gcgtgagagt gtgattttat gctcaatgcc tcgcttcata ttttccgccg
     7501 gtatcgtcca cagtttggct ttttcgtcta tatccgccca ttttgcctta gccgcttcat
     7561 tcgggcgggt cattgtgagt aactgccaca gaattaaata gcgtgtctgt aaatgaattt
     7621 gggcgttttg taaggtgtat aaaaactcgc ctaaatcttc cggcttaatg gttttgaaat
     7681 gttcaaccgt tgggctatca aactctttcg caatattggc ggtagggtta aacggtatca
     7741 tttcacggtg tacggcaaac atcataattt cattatgttt ttgaattgcc cgttttaact
     7801 tctctagttt gccctcgtct tggtattgct tgaatgcctt gattgccatt ggtgcggtta
     7861 tttgtgtgat aggcattctt ccaaagtgcg gcaagaggtt atttttaatt aaggcgatta
     7921 catctttttg gtagttgtct gaaaaattct tcttggtctt gcggtgttcc agccacgccc
     7981 acgctacatt ttcataagtg ttgctgattt cgttggcctt tgcctgttcc tgttgttggc
     8041 ggtgggtttg agggtcgata ttttgagcca ataatgccct atattcttct ctaatttctc
     8101 tcgcttgtgc taaagaaata tcagggtaag ccccaatgct taaatcattc cgcttttttg
     8161 tgaacggtct ttcataccta aaccgccaca atttagaatt tgaggtaata acaagtagta
     8221 agccgttacc gtctcttaat gggctgtctt ccggtttcgc ttttcttatt tgggtatcgt
     8281 ttaacggtgt gatttttcta gccatagtaa acctttagga gtataaagcc taaatcttag
     8341 gagtatgatt ttttgtttgg gagtacaaaa ctaaaagcga taaagcctta tttgaaaagg
     8401 ctctaaagtg gttttaggag tacgaatttt tgggggtatt ccggcgtact cctaaatata
     8461 ctcctaaaat cttcggattt gattgtatcg tataggtacg caacggacaa taaaaaagcc
     8521 ttgaaacatt gattttcaag gctttttagg tatcggttga accgtatagg attataattt
     8581 ggtggagctg gggggatttg aacccccgtc cgaaatttct ctaccttcag tactacatgt
     8641 ttagtctagt ctttaatttc gcttattcac agcggacaga cacgcaatga ataaactagc
     8701 tttatttaat ttagtgtttc gatcctaaag cggcggcgtc cacacgatct cgttttgggt
     8761 gacttatctt tgccctcgtc ttacgagcgg aagctgagga gataaggctt taaagcaggt
     8821 tattaagctg ctaaagcgta ttgttcgtcg tttgcgacta ttattttgcg gtttgtttac
     8881 gaggcctacc gcacctcgac atgcaccttg ggcttcgcca atcccgtcga atccaaaatc
     8941 agccccaaaa gtagcggtat tctaaaggaa agcggtcgaa tttgcaaaaa gttttgcaag
     9001 tggcggaact tagcggtatt gaatagctcg aaataaaatc atacaaatcc cacaccagat
     9061 agatttaact ctgttataat gtaaaccttg ctgagagtga agagaaatag aatgaaaaaa
     9121 tttaacgaga acgagattga agatgctgaa attatagatg ccgagccgat tgatgttgat
     9181 gagatagacg aagaagaaac atcggtagaa gcaatgcatc cggctttggt ttccggctca
     9241 atgcctgtgc cgcagggcaa tttggatagc tacatccgaa tggcaaatca gtatccgatt
     9301 ctcaccgccg agcaagaaaa agaactggcg gagcgttatt attatgatga agacgttgag
     9361 gcggcaaaac agctgatcct ttcccatatg cggtttgtga tccatattgc tcgtggctat
     9421 ttgggctatg gtttaccgct ggcagatctg atccaagagg gtaatatcgg cttgatgaaa
     9481 gcggtaaaac ggtttgaccc gaatgtcggc gtgcggttgg tttcttttgc ggttcattgg
     9541 gtgaaagcgg aaattcacga atatgtgctg aaaaactggc gaattgtgaa agtggcaacc
     9601 accaaagctc aacgtaaatt attctttaat ttacgcaaaa ataaaaaccg cttggcgtgg
     9661 tttaatgaag aagagatcaa aaaagttgcc gatgatttag gggtttcagt ggaagaagta
     9721 cgagaaatgg aatctcgaat gaccggacaa gatttaggtt ttgacctgcc tgccggtgat
     9781 gacgatgaag acagctacgc tccttctatg tatattgaag atagcagctc caatttcgcc
     9841 gatgacttgg aagacgaaca acataatggg caggcaaccg ctcaacttgc ctatgcgtta
     9901 gccacccttg atgaacgtag ccaagacatc atcaaaaccc gctggttaga tgacaataaa
     9961 gccacactgc aagatttagc cgataaatat aacatctcgg cagagcgggt aagacagctt
    10021 gaaaatgccg cattgaagaa aatcaaggaa gcgatttcat tagacggcta gaaatgccta
    10081 caagcggtga tttttttact cgctacgctc gcacttcgtg ccgtcggcag agccaacgtt
    10141 caaacgcaag cgtttgtgca aaattttacg caaaaagcac cgcttgtatt ttgactaaaa
    10201 atgaggatac tatgattaac attaccgata aacaaattga cccaactttc taccagcgtc
    10261 taccagcgag cagacggctt tattaacgtt gccaacgctc atttaaaaaa cattgcccca
    10321 aaccaagtca gcaatgcgat gttgtttggt tgtgccagat ttaacgccta tgttgcggca
    10381 agcaaggcgg aatataaaca gcagttggcc gattccagag aagaagttat tcaatatttt
    10441 gtggagcaat acaaagaaat gctcactgca aatttagatg aatatatcca aaacttcgag
    10501 cgatatattg aagggaaaaa ggcggattaa ccgcctttgt tttgtggtca aacttgtttt
    10561 acaaaatcac ttaaaacttg attaattcta ctttgccaac ctttacctga agctctaaag
    10621 gcttcaagaa cgcttttatc aagacgtaac gaaaccaatt ctttctttga accagctggt
    10681 ctgccacgtt ttttcattgc aattgaaaac tctgatggcg taaccgggcg ttcatcgtca
    10741 tcttttccgt cccaaataaa atcttggctt gccggaatag cttgaatagc cataagtagc
    10801 tgttttttct ctaaattttt attattcaaa gtattgttgt aagtattcat aatatgcctc
    10861 tctttctgct ttagatgctc gccgaaagct aattactctg atgtaatctt ccctttctgt
    10921 atatgcaagt gataatacga gtaaacgtcc aaatgaatat gcaaaagatt gtattctaaa
    10981 ttcattgtta cgaataactt caacatcaaa tcgatagggc gatgagagaa cttcatctgc
    11041 atcggcaaaa tctaatccgt gcttggctaa attgattttg cgtttagttt cgtcccaagt
    11101 ataaattttc ataattattg tatatacata aaataaatct aacaagaact aaatttaatt
    11161 tagcaaacag taatttgaaa atcagattag aaatacattt tttcgatgca gatcgcaaaa
    11221 ataaaatgaa atttaactgc ttgaagagtc tactgagcca ttttccccgc taccgttaaa
    11281 aaaccatctg cggttttaaa aatttcaccg aatccttgag cctccaaaat ttggtcggag
    11341 acttcacgaa acgccccttc accaccggct ttttgcaata cccaatctgc tttttctttg
    11401 atgtaatcga gggcgttacg ggttgcaatc gcaatgccac acacttcaaa agccggtaaa
    11461 tctaaggtgt catcaccaat gtaagccgtt tgctcagggg taacaccggc ttgctgcatt
    11521 agctcaaagc aggcggagcg tttttccatt ttgcctaaca aagcgagatc aattttcagc
    11581 acctctaacc gtttgcggag caaagccgta tcgccgcccg agagtactgc cactttaatg
    11641 ccacaacttt gtaacatctt aacgcctaaa ccatcgtgaa cgtggaaacg tttcattact
    11701 tcgccttggt cggtgtagta cattccgcca tcggttagca cgccgtccac atcggtaatc
    11761 actaatttaa tcttggtgag atctaacatt tttttgcctc aaatatggta tgattttacc
    11821 attatagctt ttttacctcc gtttaccaaa ggaaccgaaa tgtcgattgc cgagaattta
    11881 tcgcaaatcc atcaacaaat tcagcaaatt tccgaacaat atcaacgaga taacgtgcgt
    11941 ttgttagccg tctccaaaac taaaccagtt gaggcgattc aagcggcgat tgaggcaggg
    12001 cagcgtgcat ttggcgaaaa ttatgtgcag gaagcggtcg aaaaaatcga attttttgca
    12061 aatcgccccg aattagaatg gcattttatt gggccacttc aatcaaataa aaccaaattg
    12121 gtcgctgcct attttgattg gattcaaacg gtggatagat taaaaattgc cgagcgttta
    12181 aacgaacaac gcccagcgga taaagccccg ctcaacgtgc tgattcaaat taatatcagc
    12241 gatgaagcct cgaaatcggg cattgaacca gatgaaatgc taccacttgc ccaagcgatt
    12301 tctcaattac cgaatttgaa actgcggggc ttaatggcca ttcccaaacc agaaagcgag
    12361 ccagagcaac aaaaagttgc ctttcgcaaa atgcagctac tttttaaccg cttgcaaaca
    12421 gaatttgacg acattgatac cctttcaatg gggatgtcgg acgatatgca agcggcgatt
    12481 gaatgtggct cgacaatggt gcggattggg actgcgattt ttggggcgag acgttagcca
    12541 gctgagtttt tacataaagc tgatacaagc ggtcaaattc gccaaaaact ttgcaaattc
    12601 caccgcttgt tttgtagcca acagcggaaa aagtctgtat aattacgcct cctaatttct
    12661 tgactctcgc cagttttgat gggcgagagt ttttattttg acttaactta aagatattcc
    12721 aatgcaaaat gtagatattt caaaattgcg taacattgca attattgccc acgttgacca
    12781 cggtaaaacc accttggttg ataaactttt acaacaatca ggcacctttg gtgaaactcg
    12841 tggtgacgtt gatgagcgtg taatggattc caacgatctt gaaaaagagc gtggcattac
    12901 cattcttgca aaaaatacgg caattaactg gaatggttat cacatcaata tcgtagatac
    12961 cccagggcac gctgacttcg gtggtgaggt tgagcgtgta ctttcaatgg tagattctgt
    13021 tctgttagtg gttgatgcct ttgatggccc gatgccgcaa acccgtttcg tcacgcaaaa
    13081 agcgttcgct cacggtttaa aaccaatcgt agtgatcaat aaagttgacc gcccaggtgc
    13141 tcgccctgat tgggtggtgg atcaagtgtt cgacttgttt gtaaatttag gtgcaagtga
    13201 tgagcagtta gatttcccaa ttatctacgc ttcagcctta aatggtgtag caggcttaga
    13261 acacgaagac ctagcggcag atatgacccc actttatgaa gcgattgtca aacacgttca
    13321 accaccacaa gtggaattag atgcaccatt ccaaatgcag atttcgcaat tagactacaa
    13381 caactatgtg ggcgttatcg gtattggacg tatcaaacgt ggttcggtga aacctaacca
    13441 agcggtaacg attgtagata gcgaaggcaa aactcgccaa ggtcgtatcg gtcaggtgtt
    13501 ggggcattta ggtttacaac gttttgaagc aacagaagcc tttgctggcg atattgttgc
    13561 gattactggt ttaggcgaat taaatatttc agatactatt tgtgatatta acgcagtaga
    13621 ggctttacca gcattaagcg ttgatgaacc aacggtaacg atgttcttct gcgtaaacac
    13681 ctcgccattc tgcggtcaag aaggtaaatt tgtgacttca cgccaaattc ttgagcgttt
    13741 aaacaaagaa ttagtccaca acgtggcatt gcgtgtggaa gaaacttcga acccagacga
    13801 attccgtgtg tcaggtcgtg gcgaattaca cttatcggta ttaatcgaaa atatgcgtcg
    13861 tgaaggttac gagttagcag tgtctcgccc gaaagtaatc taccgcgaag aagacggcaa
    13921 aaaacaagag ccgtttgagc aagtgacgat tgatatcgaa gagcaacacc aaggttcagt
    13981 gatggaagca cttggtatcc gtaaaggtga agtgcgtgat atgattccgg acggcaaagg
    14041 tcgtacccgt ttagagtatg tgatcccaag ccgtggctta atcggtttcc gtaacgaatt
    14101 tatgacgatg acctcaggta ctggtttact ttactctaca ttcagccact atgatgacgt
    14161 aaaaccgggc gaaatcggtc agcgtaaaaa cggtgtgtta atttctaacg caacgggtaa
    14221 ggcattagca tacgcattat ttggcttaca agagcgtgga aaattaatga tcgaccacgg
    14281 tgttgatgta tatgaagggc aaattatcgg gattcacagc cgttcaaacg atttaaccgt
    14341 aaactgctta cagggtaaga aattaaccaa tatgcgtgca tcaggtaaag acgatgccat
    14401 cgttttaacc acaccggtgc gtttcactct agaacaagcg ttagagttta ttgacgatga
    14461 cgaattagtg gaagtaacac cacaatcggt gcgtattcgt aaacgtttat taactgaaaa
    14521 cgaccggaaa cgtgcaagcc gtactacaac cagtaccagc acgcactaac tgataaaaaa
    14581 gagcgactga ggtcgctctt ttggttttaa attctcccta caaatataac gccattacca
    14641 ccgcattttc tttgctaccg tttggcgtgg ggtaatagtt tttgcgggtg gtaacttcat
    14701 taaaaccgag tgaatcgtag agttttctgg cagaatggtt ggattctcgc acttccaacc
    14761 acagggtggt gagtttccgt tgttgcagtt gcaaaattaa ttcggaaagt aaccgcttgc
    14821 caatgccttt gccttgaaaa tcaggagcaa ctgcaatgtt aaataaggtt gcttcatcta
    14881 gcacgatatg actaatggca aaagccacaa ttttgttttg ctctaccact tttaaattca
    14941 ggtatttttc accctgatta tttaataacg tcccctttga ccacggcact aaatgggctt
    15001 gttgctcaat ttcaaataac tgctcgaaat cttccgcttg aatttgctca atcacgctgt
    15061 tctccaaatt gtgccgaaaa agtatcaatt tgttgccaaa gttggcgttt ggtcgtagat
    15121 ttggctaaat cttgccaaga ctcgtttttc caagcggtct gattagtaaa actttttgcc
    15181 attttgaccg cttgttcttc cgcttgaatc agccaaaaga tcggcgaatg ctcaaacacc
    15241 aaacgttgtg attgttcgcc agtcagccat tgatattcgc tgttttttaa ctttaaagca
    15301 cgcagaatat cggcaaagag ccggctgtgt tggtgatctt cctcacacac taccaccaat
    15361 tttaccgcat tgtttaggcg gatttgagca tcgcctttta gcacttgggg attggttagc
    15421 acccattgcg aaatacccat ttcctgtaac agtaaatcac gacgattcat ttaaaacctc
    15481 atcaaatttt gcaaatagta tcaaaactcc gcttgaacag aaactttttt caaaaaattc
    15541 aagatttctg tacttaaatt cggtatattc acgctaaatt ttttagataa ggtaagaaaa
    15601 tgctctcttt agaaagcgaa gtacttgaac gccatttggc gttatttgaa aacaagtcgg
    15661 tgttattatt tggcgatgtg cgagatgatt ttgcccgcca gctgcaatct cgtgcggaaa
    15721 aggttgcggt attcagtagc tattttgatt acgcacgcca ccatagtgag gttgaatttg
    15781 gcttagaatg tggtttgagt gccgagttag cggtgtttta ttggacgaag aacaagcagg
    15841 aatgccaatt ccaactgcta caatggctgt cgcaatgcca agcagggcaa gaaatgttga
    15901 ttatcggcga aaaccgagct ggtgttcgtt cggtagaaaa actgctcgaa ccgttcggca
    15961 atattgccaa aatcgactct gcacgccgtt gtggtttata ccattttgag ctacagaccg
    16021 tgccgacatt cgattgcaaa aaattctgga aatcctaccg cttgcaagac ttagatgtgt
    16081 tcgatctacc agcggttttt agctcggcgg agctggataa cggcaccaaa ttattgcttt
    16141 caaccttcga caaagcagac aggctaaaag gcaaagtgtt agatttaggc tgtggggctg
    16201 gcgtgattgg ggcaacgctc aaacaacaat ttccgaaaat caaactgacg atgagcgata
    16261 ttcacgcaat ggcgttggaa tccggcagac gtactttggc ggaaaatcag ttagaggggg
    16321 aagtggtagc aagtgatgtg ttctctcaca ttaatgaacg gtttgattta attgtctcca
    16381 acccaccatt ccacgacggg gtcgataccg cctaccgagc ggtggaggag ttgattttcc
    16441 aagctaaaaa tcacctaacc aaaggcggtg agctgcgaat tgtcgcaaac gcattcttgc
    16501 cttacccaga tttgctcgat aaagccttcg gcaaacacga cgtactggca aaatccacca
    16561 agtttaaggt gtattccgca agaacataat aggcagaaca aacggttata aaaaagccgg
    16621 tatttgctta aaaaagtgct tgatatttct gccggcttga cgtaaattct gttcatactg
    16681 ttttggagta atgcaatgaa tttaaactac actttacatc accaccacac tttaacctga
    16741 tatctttcgg gcatttggtg tgtgcggaag ataactcttc cgagcaagtg tagcaaatca
    16801 ataaagatct ctcggaaggc aactttcgag agattttttt atagataaaa tttgggaata
    16861 atatgaaaaa cccgattgaa atttaccaaa gccaagacgg caaaacccaa gtttccgtgc
    16921 agtttgataa ggaaacggtg tggctaagtt tacagcaaat ggcagatatt tttggacgag
    16981 ataagtctgt tatttctcgg cacttacgaa atatctacca agaaggtgaa ctggagcgtg
    17041 aggcaactgt tgcaaaaaat gcaacagttc aaattgaagg tgctagagaa gtcgttcgcc
    17101 taaaagacta tctggtgaaa ggctatgccc ttaacgaacg ccgtttgcag gaacgaggta
    17161 tcgagtttga gcaggtgatt ggtttgctca gtcaatacac tggttgtctt agccttgttg
    17221 gtggcagaaa gtttgcctga acaaaaagaa ctgatgatta aactgattga acactttatt
    17281 ttattaaaag cataacagga aaaaatatga gtattaatat ttcgccgtta gcctccaaaa
    17341 atctcactga atggaaacta ttgtggcaac aatatttaga tttttatcaa gtgaatttag
    17401 cagatgatat tattcaatca acttggcaga aagtttcaga gagtgaaaat gtaaagggat
    17461 ttggggcttt tgttgataac agaatggttg gttttgttca tattgtgatt cacccaaata
    17521 cttggaattt aactgaatgc tgttatttgg aagatttatt tgttttagct gaatatcgca
    17581 accaaggcat aggaaaagaa ttaattgaat atatttatcg atatgcacag gaaaaaggat
    17641 ataaccgagt atattgggta acagataaaa acaatcatca agcacaacag ctttataata
    17701 aattagctaa tgatagcggt attattcaat atcgaaaaaa tttctaaact atgtataaat
    17761 tatacaggaa cacaatatga caatttcaca actttcccgt aaaaacattc aagctctcac
    17821 cccttaccaa tcggcacggc gtttgggggg tagtggcgat gtgtggctga atgccaatga
    17881 atatgccctt tcgccaaact ttgatttaac cgaccgcact tttaaccgct accctgaacc
    17941 tcaaccgcag gcggtgattg aaggttacgc ccgatatgca ggcgttgcac ctgaaaacgt
    18001 gctggtttcc cgtgggggcg atgagagcat tgagctgatt atccgagcct tttgcgaggc
    18061 aaacgacagc attctctact gcccaccaac ctacggaatg tacgccgtga gtgccgacac
    18121 ctgtggcatt gcgaccaaaa ctgtgccttt aaccgccgat ttccagttgg atttagccca
    18181 aatcaaagct aacctcgagg gcgtgaaagt ggtgtttgtg tgcagcccga acaacccgac
    18241 aggcaactta atcaagcggt cggatttgtt cgaacttttg caaatcaccg caggcaaagc
    18301 gattgtggtg gtggacgaag cctacatcga attttgccct gaagctcgct tggtaagcga
    18361 gctggcgaat ttcccacatt tggcgattat ccgcacccta tccaaagcct ttgccttggc
    18421 gggtttgcgt tgtggcttta ccttggcaaa cgctgagctg atcggcgtgt tacaaaaagt
    18481 gattgccccg tatccgctgc ctgtgcctgt ttccgacatc gccgcccaag ccctctcccc
    18541 acaaggcatt gagcagatga aaacccgtgt ggcggaagtc atcaccctgc gtgccgaatt
    18601 gcaaaaaaat ctggaaaact taccgcttgt agaacaagtt tttgacagcg aagccaacta
    18661 cctcctattc aaatgccaag acggacaaaa agtcttcaaa gcactttggg agcaaggcat
    18721 tattttgcgt gaccaacaca aagcgttagg attgcaaaat tgcattcgga ttacggtggg
    18781 ggcgagagag gagaatttga gggtggttga ggcgattaca gcactgagcc aatttcagag
    18841 atagaattta acgagcagta ttttaagaga catttatagc ctagcacggc atagccgtac
    18901 taggttacgc ataagtcagt ccctttggga ctgaatacag agaggcaaag tctctcacta
    18961 atgcttaacc ccatatgcct tggcgtgtgg ggagagtaat gaataagata cagatacagg
    19021 agaaaccaat gcaacccacc ctttttatcg accgtgacgg cacgttaatt gatgagccaa
    19081 aaaccgattt tcaaatcgac agcttggaaa agctgaaatt cgagaaaaac gtgattcctg
    19141 ccctgctcaa actcaagggc aaataccgct ttgtgatggt tacgaaccaa gacggcttag
    19201 gcacgagttc gttcccacag gcagatttcg acaaaccgca caatgcaatg atggcgttgt
    19261 tcaactcgca agggattgaa tttgatgatg tgctgatttg tccacacaag cccgaagacg
    19321 gttgcgattg ccgcaaaccg cacaccaaac tgctacaaaa atatatcgac cgccaactgt
    19381 tcgacccagc caacagcttt gtgattggcg accgtgctac cgatgtgcaa ctggcggaaa
    19441 accttggcat tcgggcgttg caatatcacc ctgaaaaact gaactgggat ttgattgctg
    19501 aaaaactact gggcgaagcc gtcaccaaca ttggcgagcg accaaagcgc tttgccgaag
    19561 ttatccgtaa aaccaaagag accgacatca aagtgcaagt gtggctggac gaaacaggca
    19621 acaacgaaat cagcaccggc gtgggctttt tcgaccatat gcttgaccaa attgccaccc
    19681 acggcggttt tagaatgaac atcaccacca aaggcgactt gtggattgac gaacatcaca
    19741 cggtggaaga caccgccctc gccctcggca ccgcattaaa acaagcgatt ggcgacaaac
    19801 gcggcatcgc ccgtttcggc ttcgtgttgc cgatggacga aagccgtgcg gaatgtgcga
    19861 tggacttatc aggcagacct ttcatcaagt tcaaagcgga tttcaaacgc gacaaagtgg
    19921 gcgatttcag caccgagctc accgaacact tcttccaatc catcgccttc acgatgctcg
    19981 ccaccctgca catcaaggca aaaggcgaca acgaccacca caaaatcgaa agcctgttca
    20041 aagtcttcgg cagaacactc agacagtgca ttcgtattga agggaatgaa ctaccaagca
    20101 gtaaaggtgt attataatca ccgtaggggc gggttttaac ccgcccgaaa gtgcggttga
    20161 aatttgcaaa gtttttgggg attttgaccg cttgttataa aggatatatt gatgattaga
    20221 gaagttattg actttataaa gaataataaa tggtatgttc tgttagttgt attgttatta
    20281 ggattatatt tttatcagtt tcacggggga ttatcctcag atagtgaaaa atgggatcat
    20341 tttggtagct atattggtgg tatattttct gctgttactt tattgagtgt tttgcatgga
    20401 atgcagttgg aacgtaaaag atttaaggag caaaaagaag aatttgaaaa tgacaaaaga
    20461 gtattagaaa agagaagaag aaaagaagat ttttagcgta cattttttat gatgttagag
    20521 cagcataatc ttaaaatttc atcaatagaa ggtaatattg ataatgttta tgatatgcta
    20581 attacagcat atagatttga aaatgctagg atttattgtg aggtaggaag attaaataaa
    20641 gaatatgcga ata
//
LOCUS       DANLXO010000038        20585 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.038, whole genome shotgun sequence.
ACCESSION   DANLXO010000038 DANLXO010000000
VERSION     DANLXO010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20585
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.038"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..576)
                     /locus_tag="PXD69_001179"
     CDS             complement(<1..576)
                     /locus_tag="PXD69_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283387.1"
                     /translation="MSKNTHSYLPLQKYHILPIYGISPELIKKSVKDCSRDREKISHC
                     TLLNACSKALGFSGGFAGFQEDYLSNLTQFMEKHGLLYLVDLTKQKYPVNDMCMTRSL
                     ALKKQDISERIFFSGKEIPKRIFTGFNFRYDMHLANGFRIGNSLKTPYSDIGICEDIN
                     EALKNPSIKIDCRDGTIRSMADVVIGRYLDKV"
     gene            932..1228
                     /locus_tag="PXD69_001180"
     CDS             932..1228
                     /locus_tag="PXD69_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL6283388.1"
                     /translation="MTAITIPQFEEVTSKQFQSEFGRIVDIVKGKTPVAITQYGRPTM
                     VLFPYDQAVEARRLLAKQRLLEMLAERDKNPPAALAEITLEELDKMIDEERNAL"
     gene            1218..1634
                     /locus_tag="PXD69_001181"
     CDS             1218..1634
                     /locus_tag="PXD69_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative toxin-antitoxin system toxin component,
                     PIN family"
                     /protein_id="HDL6283389.1"
                     /translation="MHSDYLVIDTNILISGLLFPKSNPNLAVKKALLGYTICVSQATF
                     DEFLEVSARPKFAKYFSIQEREEFIANLLDAVKFVEIKETITDCQDPKDNKFLEVAIS
                     AKAKYLVTGDKKDLLSMNPYRNVEIISVSEFLAETR"
     gene            1634..3292
                     /locus_tag="PXD69_001182"
     CDS             1634..3292
                     /locus_tag="PXD69_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HDL6283390.1"
                     /translation="MKRFLTLFLLLFSSFSLAETHQIGILAQRGEAYTRTHWQPWVDW
                     LNSQFPNERFELVPLGINEASRRAELDFLLTNQAQFFYLSNQNVRWLATLNSPFSANG
                     EQGAVGSSIWVRADSHYQQLSDLKNQTISAVDNDAFGGFLLGLYQFHQAGMRQNRDFS
                     VQFSGFPVENALALLAEKQVEAAIVPVCLLEELEKEGKFKRSDFRLILQNPQAQGCLA
                     STPLLPNWSLAAMENVPNELAVQLATRLLNSHNPDLPRWTLPFSSAQADHILRELYRH
                     PQQKSLWATVLDWVRLNKFGLLAVVLFILLNLVALRYQVYRKSKALQQAHCKMQQYQQ
                     ELTRADRLALLGEMTTGFAHELKQPLSAVRMYAEGLKSQNSDPYQQRILDKLIAQVDR
                     AVKTMQSIRDWAQNRPSGEPQAVILNQLITNVIEFVAVENRQNAQISLIADRTFRLNL
                     HATVLEQVLTNCLLNALQAGASEISVRLQAVENGLEIAIEDNGGGFSPAQLEFPFVPF
                     RTDKPHGLGLGLVLCQRLMQSLNGRIVLANGENGAKVVLLLPQI"
     gene            3378..4035
                     /locus_tag="PXD69_001183"
                     /pseudo
     CDS             3378..4035
                     /locus_tag="PXD69_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249115.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
     gene            complement(4019..4957)
                     /gene="ttcA"
                     /locus_tag="PXD69_001184"
     CDS             complement(4019..4957)
                     /gene="ttcA"
                     /locus_tag="PXD69_001184"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDL6283391.1"
                     /translation="MTDDIQKSDKKITYNFNKLQKRLRRNVGNAIADFGMIEEGDRVM
                     VCLSGGKDSYTLLDILLNLQQSAPVNFSVVAVNLDQKQPGFPEEVLPRYLESIGVEYK
                     IVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLATLF
                     LNMFYGGKMKSMPPKLISDDGKQIVIRPLAYCKEKDIIKYAEAKQFPIIPCNLCGSQP
                     NLQRQVVKEMLNTWDRQYPGRLETMFSALQDIVPSHLCDPKLFDFKGIKHGQTIEGIE
                     GDTAFDDVKIEAKTFLYEDDDNNFAEAGMIQFKEVN"
     gene            complement(5020..5733)
                     /gene="ubiG"
                     /locus_tag="PXD69_001185"
     CDS             complement(5020..5733)
                     /gene="ubiG"
                     /locus_tag="PXD69_001185"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HDL6283392.1"
                     /translation="MQNVDQQEITKFENMAKTWWDPNGSFKPIHLLNPLRLAYILEKS
                     NGLFGKKVLDVGCGGGILSEAMAKQGAIVTGIDMTSQPLEVAKQHAKESGLEIDYQQT
                     TIENFLAKMTACNQEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTF
                     KAYMLVIIGAEYVLKMLPKGTHEFEKFIKPAELLAWCDQADLRCQEMRGYHFNPLTEK
                     FWLNNDVSCNYIATLKPNN"
     gene            5798..6178
                     /locus_tag="PXD69_001186"
     CDS             5798..6178
                     /locus_tag="PXD69_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine dimer DNA glycosylase/endonuclease V"
                     /protein_id="HDL6283393.1"
                     /translation="MTRINLVPPTELCDQHLLAEHRELTRIPNAVAKGKFSLKGQPED
                     YKLGEGHVRFFFNKLTFLKKRYDALHEECLARGFKVQYFWAEHLPQDPSLWLDYQPTE
                     TALTVNRERIALRMPANPRFSERK"
     gene            6275..8971
                     /gene="gyrA"
                     /locus_tag="PXD69_001187"
     CDS             6275..8971
                     /gene="gyrA"
                     /locus_tag="PXD69_001187"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDL6283394.1"
                     /translation="MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLFSMDQNSNTYNKPHVKSARVVGDVIGKYHPHGDFAVYNTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDAPAAMRYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLP
                     TKIPALLVNGSSGIAVGMATNIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFP
                     TGAIINGRKGIEEAYRTGRGKVYVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKI
                     AELVKEKKIEGISKIDDYSDKKGISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMV
                     ALDNGQPKVLNLRQIIEAFVKHRREVVTRRTIFELRKARERAHILEGLAIALANIDPV
                     IELIRASKTAEEAREGLLARPWALGNVAPMLEAAGVGASRPEDLPEHLGVRDGEYYLS
                     EAQARAILELRLHRLTGLEHEKIVEEYKELLTEIGELIHILTSPERLMEVIREELERV
                     KTDFNDERRTEITAASGDINIEDLIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGK
                     SATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQLKVYQLPQASRGARGTPIVNILPL
                     VKEENERITAILPIPNGEFSADKFIFMATASGVVKKVSLDAFSNVRASGLIALKLREG
                     DELIGVDITDGNSEIMLFSAQGRVVRFAETAVRAMGRTATGVRGIKLSTTEISSEEIE
                     EAEIIETDNEEAEDSSSVSLDKDRVVSLVIPRTEGDILTVTQNGYGKRTVISEYPVKS
                     RATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDAGTLVRTRVAEVSLVGRNTQGVR
                     IIRTAEDEQVVSLERVCEPEDDENESLDALENAETAETSTEE"
     gene            9066..11030
                     /locus_tag="PXD69_001188"
     CDS             9066..11030
                     /locus_tag="PXD69_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283395.1"
                     /translation="MALINLSNAYLGFGDHPLLDHTELHIEPGERVCLVGRNGAGKST
                     LMKILAGEVQLDDGKLVFEKDIVVTRLEQDPPRHIEETVFDYVAEGIAHLADLLKQYH
                     HISLQMQTDYSDELLAKLSAVQSQLEHANGWQFENRIQDTLKLLELAPDKRLCELSGG
                     WVRRAALARALVADPDVLLLDEPTNHLDIEAIAWLENLLLDFKGSIIFISHDRAFIRK
                     MATRIVDLDRGKLVSYPSNYDKYLEEKAEDLRVEALQNELFDKKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKALREERRNRREVQGTAKIQIDNTARSGKIVFEVENAGYEIGGRTL
                     LKNFSTTILRGDKIALIGANGIGKTTLIKLLLGEIQPTSGSVRCGTKLEVAYFDQYRV
                     DLDPEKTVMDNVADGKQDVEVNGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNCLL
                     LAKLLLKPNNLLILDEPTNDLDVETLELLEEMLTDYQGTLIIVSHDRQFVDNTVTECY
                     FFEGEGVVNKYVGGYFDAKQQQENYFAATADKRLNSSKNLQKIEEKAPLAEQEKQKAD
                     QEKTKAEPTKKTKLSYKEQRELDELPAKMEQLEADIEALQAEVNSAEFFAKDPSYTNA
                     QLQKLADTEAALEQAFERWEALENIKNGNI"
     gene            11112..11870
                     /gene="tcdA"
                     /locus_tag="PXD69_001189"
     CDS             11112..11870
                     /gene="tcdA"
                     /locus_tag="PXD69_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDL6283396.1"
                     /translation="MTERLDNYEQRFGGIGRLYTPEGLEKLRRSHICVIGIGGVGSWA
                     VEALARSGIGKITMIDMDDICVTNINRQIHAMSGTVAQLKTEAMKERIERINPECVVE
                     IIDDFLTQDNLADYLNRGYDYVIDAIDSLRVKAAMIAFCKRNKIKIITTGGAGGQTDP
                     TKIQITDLSKTVQDPLAARVRSLLRKEYGFSNKNKFGVECVSSTQQLIFPQMGEACEV
                     SATMNCANGFGAVTMVTATFGFFAVSRVIDKLLK"
     gene            11917..13284
                     /locus_tag="PXD69_001190"
     CDS             11917..13284
                     /locus_tag="PXD69_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HDL6283397.1"
                     /translation="MAIHRVNPKGSMEQLSHLEMELLAKNTQGNLHQLYRNCSLAVLN
                     SGVHTDDSRALLSQYPDFEIRLLTREKGVSLELHNPPETAFVDGKMILNIQYHLFAVL
                     RDIVFVNALKNAIRPLEETSLEALTTNTVFSILRNAKAIEMNTDPNLVVCWGGHSINE
                     TEYQYCRAVGQEFGLRELNIVTGCGAGVMEAPMKGAAIGHANQRYKNGRFIGITEPSI
                     IASEPPNPIVNELVIMPDIEKRLEAFVRLGHAIVVFPGGPGTLEELLYIIGIKLNPAN
                     HAQQLPLILTAPKESADYFYAIDQFIGETLGEEARSLYEIIIDDSVLVARKVKQAMIE
                     VKSSRYESGDAYNFNWSLKIEEDFITPFIPTHENMANLNLSLAQPKEQLAANLRRAFS
                     GIVAGNIKPETSDLIEKYGVFKLHGDRKLMEHIDKLLERFVVQHRMKIPTGEAYQPCY
                     EIVKG"
     gene            13304..14851
                     /locus_tag="PXD69_001191"
     CDS             13304..14851
                     /locus_tag="PXD69_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HDL6283398.1"
                     /translation="MYLKHIEISGFRGINHLSLQLRPNMVLIGENAWGKSSLIDALSL
                     IFNLEQALYQFQFKDFHIQYTDTPNQVRDIQLVFTFCEEHQHDLAVQFPAYLAQAAFY
                     IDNHRCVSLAVTGKLHGEQISTDYQFVDQSLKPIQIEQAENAIRQFIYHHPVYRLRDA
                     RLNNRVHNELLLKGSSQLEDDFQRELNALSSLLKYYFLTSQSRYLIKTSMQDTALWWE
                     KVKSLCLRLKQQPELVESAQQHISTLFLFNPRSTVIEKPIILFEDLNAQLHPRMIAIF
                     WELLGFLPSQRITTTNSIELLSQVPLREICRLVRHHDHTQAYWLERHSLGKEDLRKLT
                     FHIHHNRGLALFAKAWILVEGETEVWILQELARLLDIHLEMEGIKIVEFAQCGLRPLI
                     KYARAMGIEWYVLTDGDDSGKRYADTVKSMEEDFAHRLTMLPQKDIEHFFYKAGLRNV
                     FIQLANWRSQEKYPVSYIIKRAIQRSSKPDLAIALANEMGQRGEHSIPTLFKQLFADV
                     LALINKV"
     gene            15074..16108
                     /gene="metN"
                     /locus_tag="PXD69_001192"
     CDS             15074..16108
                     /gene="metN"
                     /locus_tag="PXD69_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HDL6283399.1"
                     /translation="MIQLKNISKQFEVKGKKITALDNVNLEVPRGTIYGVIGASGAGK
                     STLIRCVNLLERPTIGQVIVDGQDLTAMSDKELIHARRNIAMIFQHFNLLSSQTVFEN
                     VALSLRLSNTPKEQVEKKVNELLDLVGLTDRKDVYPANLSGGQKQRVAIARALASDPH
                     VLLCDEATSALDPATTQSILQLLKDINKRLGLTILLITHEMEVVKRICDRVAVIDKGQ
                     LIESGSVSEIFSNPKTELAQKFIQSTFHFELPQEYTEQLSSSPTEHSKPIIKFEFTGR
                     SVDAPLLSMASKKFGIDFSILMSQIDYAGGVKFGFVIAEVSGNPDSIAEAKFYLIDNN
                     VKVEVLGYVG"
     gene            16098..16775
                     /locus_tag="PXD69_001193"
     CDS             16098..16775
                     /locus_tag="PXD69_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6283400.1"
                     /translation="MWADFMQEMTPQMWSLVWESTFETVYMGFVATALAVVIGLPIGF
                     LAFLTGKGEILENPRLHQVLDVVINIGRSIPFIILLIILLPFTRLVVGTTLGTTAAIV
                     PLSVSAIPFFARLTSNALLEIPSGLTEAAKSMGATNWQVVTKFYLPESLPILINGITL
                     TLVALIGYSAMAGAVGGGGLGNLAISYGEHRNMVYVKWIATIIIVAIVMISQKLGDHL
                     AKRYDHR"
     gene            16798..17631
                     /locus_tag="PXD69_001194"
     CDS             16798..17631
                     /locus_tag="PXD69_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL6283401.1"
                     /translation="MSFKKILGVALVSALALTACKEEKKAESTAAPAAQAPAKIKVGV
                     MSGPEHTVAERAAQIAKEKYGLEVEFVLFNDYALPNTAVSKGDLDANAFQHKPYLDKD
                     SQSKGLNNLVIVGNTFVYPLAGYSKKVKNVSELAEGAVIAVPNDPSNLARALILLEKQ
                     GLIKLKDNTNLFSTSVDIIENPKNLKIKEVDTSIAAKALDDVDLAVVNNTYAGQVGLN
                     TQDHGVFVESKDSPYVNIIVARQDNKDAANVQNFIKSYQTEEVYQEAQKHFKDGVVKG
                     W"
     gene            17714..18544
                     /locus_tag="PXD69_001195"
     CDS             17714..18544
                     /locus_tag="PXD69_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL6283402.1"
                     /translation="MNFKKLLGVALVSALALTACKDEKAQAPATTAKTENKAPLKVGV
                     MTGPEAQMTEVAVKIAKEKYGLDVELVQFTEYTQPNAALHSKDLDANAFQTVPYLEQE
                     VKDRGYKLAIIGNTLVWPIAAYSKKIKNISELKDGATVAIPNNASNTARALLLLQAHG
                     LLKLKDPKNVFATENDIIENPKNIKIVQADTSLLTRMLDDVELAVINNTYAGQAGLSP
                     DKDGIIVESKDSPYVNLVVSREDNKDDPRLQTFVKSFQTEEVFQEALKLFNGGVVKGW
                     "
     gene            18596..19387
                     /gene="metQ"
                     /locus_tag="PXD69_001196"
     CDS             18596..19387
                     /gene="metQ"
                     /locus_tag="PXD69_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HDL6283403.1"
                     /translation="MKIMKLAGAVAIFSLFLTACNDKAEKLKVGVISGPEHKVMEVAA
                     KIAKEKYNRDVELVVFTDYATPNAALDKGDLDLNAFQHKPYLDNQIQEKGYKLVPVGN
                     TFVYPIAAYSKKIKSLAELKDGDTIAVPNDPTNLARALILLEKQDLIKLRADAGLKAT
                     SVDIIENPRKLVIQEIEAPLLPRTLDDVAFSIINTTYAGQNGLTPTKDGIFVEDKDSP
                     YVNLIVARENNQHSEAVKDLVKAYQTEEVYNKANEEFKGAMIKGW"
     gene            complement(19432..20583)
                     /gene="metK"
                     /locus_tag="PXD69_001197"
     CDS             complement(19432..20583)
                     /gene="metK"
                     /locus_tag="PXD69_001197"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDL6283404.1"
                     /translation="MAINLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACET
                     YVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPD
                     INQGVDRADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQSKVRKSGKLDW
                     LRPDAKSQLTFAYENNKIIGIDAVVLSTQHAEHISQKELIEGVMEEIIKPVLPSEWLS
                     QNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNEILVKLIYQNF
                     DLRPYGLIKMLDLIKPIYRETAAYGHFGRKHFPWEKTDKAEALRAGAGL"
BASE COUNT         6076 a         4092 c         4778 g         5639 t
ORIGIN      
        1 tactttatca agatatctac ctatgactac atctgccata cttctgattg tgccatcacg
       61 gcaatcaatt tttattgatg gattttttaa tgcttcattt atgtcttcac atatacctat
      121 gtcagaatat ggggttttta aggaatttcc gatacgaaaa ccattagcta aatgcatatc
      181 atatcggaaa ttaaatccag taaatattct cttagggatt tcctttccgc taaagaaaat
      241 tctttcagat atatcttgct ttttcagagc taagctcctt gtcatgcaca tatcatttac
      301 tggatatttt tgttttgtta aatctacaag atataagagc ccatgttttt ccatgaattg
      361 cgtcaaatta gataaataat cttcttgaaa ccctgcaaag cctccagaaa atcctaaagc
      421 ttttgagcaa gcatttaaca aagtacagtg agaaattttt tctctatctc tagaacaatc
      481 tttaacagat tttttaatta attctgggga aataccataa attggtagaa tatggtattt
      541 ttgtaaaggt aaatagctat gggtgttttt tgacatatat taaatcctct ttgttaatta
      601 agttagaaaa atgcctctgt gaaaatcaca gccatactag gaaataaaag gatttaattt
      661 ataaatgaat tgactataag caatataatc tatcgaatta tctcttttgt tcaaggcaag
      721 tatggatacc tgaccgcagg cctggagata gaacctacat ataatatgct ctactacatt
      781 aagccataaa aaatagaaaa tcaagtgttt gttcaagttt ttatgttatt gaatttacaa
      841 taactacaaa aatttatctt aattggctcg attgattttt acacaaaaca tagctaacat
      901 atccaaaatc actcacatta ggagcttaaa aatgacagcg attactatcc ctcaatttga
      961 agaggtgact tctaagcaat ttcaatctga gttcggcaga attgttgata tcgtaaaagg
     1021 caaaacccct gtggcgatta cccaatatgg cagaccgaca atggtgcttt ttccttacga
     1081 tcaagcggtt gaagctcggc gattattagc aaaacagcgt ttgcttgaaa tgcttgcaga
     1141 gcgagataag aatccgccgg cagctcttgc agaaatcacg cttgaagagt tggataaaat
     1201 gattgatgag gaacgtaatg cactctgatt atttagtgat tgatacgaat attttgatta
     1261 gtggtttatt gttcccaaaa tcaaatccca atttagcagt gaaaaaagcc ttattaggct
     1321 ataccatttg tgtctcgcaa gcgacttttg acgaattttt agaagtctcc gctagaccga
     1381 aatttgctaa atatttcagt attcaggaaa gggaagaatt tattgccaat ttgttggatg
     1441 cagtaaagtt tgtggaaatt aaagaaacga ttacagattg ccaagatccc aaagataata
     1501 aatttttaga agtggcgatc agtgcaaaag cgaagtattt agtgacgggc gataaaaaag
     1561 atctcctcag tatgaaccct tatcggaatg ttgaaattat ttccgtcagc gaatttttag
     1621 cggaaactcg ctaatgaaac ggtttctcac tctttttctt ctcctttttt catctttttc
     1681 attagccgaa acccaccaaa tcggcattct cgctcagcgt ggggaagcct acacccgcac
     1741 ccattggcag ccttgggtgg attggttaaa ttcgcagttt cccaacgagc ggtttgagct
     1801 ggttccattg gggattaacg aggcgagccg ccgggcggag ttggattttc tgctgaccaa
     1861 tcaagctcag tttttctatt tgagtaacca aaatgtgcga tggcttgcca cgctcaacag
     1921 tccgttttcg gcaaatggtg agcaaggggc ggtgggcagt agcatttggg tgcgtgccga
     1981 cagccattat cagcagttaa gcgatctgaa aaatcagact atcagtgcgg tggataacga
     2041 tgctttcggc ggttttttgc ttgggttgta tcagtttcat caagcaggaa tgcggcaaaa
     2101 tcgggatttt tcggtgcagt ttagcggttt tccggtggaa aatgcgttgg ctttgctggc
     2161 ggaaaaacag gtggaagcgg cgattgtacc ggtctgtttg ctggaagagt tggagaaaga
     2221 gggcaagttc aagcggtcgg attttcgctt aattttgcaa aacccacagg cgcagggttg
     2281 ccttgccagc acgccgttgt tgccgaactg gtcgctggcg gcaatggaaa atgtgccaaa
     2341 cgagctggcg gtacagcttg ccacacgctt gctaaacagc cacaatcccg acctaccccg
     2401 ctggacgttg ccgttttctt ccgcccaagc cgatcacatt ctgcgtgaac tgtatcgcca
     2461 cccgcaacaa aaaagcctgt gggcaacggt gctggattgg gttcgtctca ataaattcgg
     2521 cttgttggcg gtggtgttgt tcattttgct caaccttgtc gccctgcgtt atcaggtcta
     2581 tcgcaaaagc aaggcgttac agcaggcaca ctgcaaaatg cagcagtatc agcaggaact
     2641 gacccgagcc gaccgccttg ctttgttggg cgagatgaca accggttttg ctcacgaact
     2701 gaaacagccg ttgtcggcgg tgcgaatgta cgccgagggg ctgaaaagcc aaaacagcga
     2761 tccttatcaa cagcggattt tggataagct gattgcgcag gtagatcggg cagtgaaaac
     2821 gatgcagagc attcgggact gggcgcaaaa ccgcccgagt ggtgaaccgc aagcggtcat
     2881 tttgaaccaa ttgattacta atgtgatcga gtttgtggcg gtggaaaatc gccagaatgc
     2941 acaaatctcg ctgattgccg accgcacttt tcggcttaat ttacacgcca cggtactgga
     3001 acaagtactg acgaactgcc tgctcaacgc cctgcaagcc ggtgcaagcg agatatcggt
     3061 gcggttacaa gcggtcgaaa acgggctgga aattgcaatc gaagacaacg gcggcggttt
     3121 ttcccctgcc cagcttgaat ttccgtttgt gccatttcgc accgacaaac cacacggctt
     3181 agggctaggc ttggtgctat gccaacggct gatgcaatcg ctcaacggac ggattgtatt
     3241 ggcgaacggg gagaacgggg cgaaggtagt gcttttactc cctcaaatat aaatgtaggg
     3301 gcaggtcctg tgcctgcccg taaatcctat caaattcagg gcgggcacag gacccgcccc
     3361 tacggaaaaa agaaaaaatg attattcaca ttcttgatga cgaagaaagc attttagacg
     3421 ctatgtcgtt cctgcttgcc ccgcttgggg tggaaatcca aacgtggcaa tccagcctag
     3481 attttttggc acaggcggat ttacaccggc aaggcgtgct gttactagat attcgaatgc
     3541 cgctgccaga cgggcaacag gttcatcaac aactgcgaga ggcacaatcg accctggcgg
     3601 tggtgattat gaccgcccac ggtgatgtgc cgatggcagt cgctgaattg aaaaaaggcg
     3661 cagtggattt tctgcaaaag ccggcaagtt ttgaacagct aaaacaggcg attgcacagg
     3721 cggaaaaagt aagtgaaaaa gcggtgaaaa ttcgtgaaaa ttcgtgaaat ttcgcaaaat
     3781 tacgccaaat tgacggaaaa agagcgtaac cttgtgccac tgattatgca aggtttcacc
     3841 aataaacaga tcgcagataa attagcgatt tcagtgcgta cggtggaagt acatcgagcc
     3901 aatgtgatgg aaaaaatgca ggcggagagt ttggcggggc tggtgcagat gatcggggag
     3961 ttacaatata aaggtagcgg aaattgctct gctaccttta gtttcgactt ttgccgtatt
     4021 aatttacttc tttaaactga atcattcccg cttcggcaaa attgttatcg tcatcttcgt
     4081 ataagaaggt tttggcttca attttgacat catcaaaagc ggtgtcgcct tctatgcctt
     4141 caatggtttg accgtgttta atccctttaa aatcaaacaa tttcggatcg cataagtggg
     4201 atggcacgat atcttgcaaa gcactgaaca ttgtttctaa acgccccggg tattggcgat
     4261 cccaagtatt cagcatttct ttcaccactt ggcgttgtaa attaggctga gaaccacaca
     4321 gattacacgg aataatcggg aactgcttgg cttcggcata tttgataatg tctttttctt
     4381 tacaataggc gagtgggcgg atcacaattt gcttgccgtc atcagagatc agtttaggtg
     4441 gcatactttt cattttgccg ccgtagaaca tatttaagaa taaagtcgcc agcatatcgt
     4501 cacggtgatg ccctaatgca attttggttg cacccaattc ggtggcggtg cggtataaaa
     4561 tcccacggcg aagtcgtgag caaagtgaac aggtggtttt gccctccgga attttctctt
     4621 ttacgatgcc gtaggtgttt tcttccacaa ttttgtattc cacgccaatg ctttctaaat
     4681 agcgaggcaa tacctcttcc ggaaatcccg gttgcttttg gtctaaattg accgctacca
     4741 cactaaaatt caccggtgca ctttgctgta aattgagcaa aatatctaac agcgtatagc
     4801 tgtctttacc gccggaaagg cagaccatta cacggtcgcc ctcttcaatc ataccaaaat
     4861 cggcaatggc attaccgaca ttacggcgta aacgtttttg taacttgttg aaattataag
     4921 taattttttt atcagatttt tgaatatcgt ctgtcataat agttgtacta ggcttagaaa
     4981 ttagcggtgt atagtaaaga tttcgcacta ttttgcaagt taattattcg gcttcagcgt
     5041 agcgatatag ttacaactca catcattatt gagccaaaat ttttcggtta atgggttgaa
     5101 atggtagcct ctcatctctt ggcaacgtaa atcagcctga tcgcaccaag ctaacaattc
     5161 ggcaggcttg atgaattttt caaattcgtg cgtgcctttt ggcaacattt tcagcacata
     5221 ttccgccccg ataattacca acatataggc tttaaaagta cggttgatgg tagagaaaaa
     5281 cagcacgccg tcaggtttga gcagggcttt acagctttga atgatagaaa gcggatcggg
     5341 aacgtgttcc agcatttcca tacaagtaat cacatcgaat ttttcttgat tacaagcggt
     5401 catttttgct aaaaaatttt caatcgtggt ttgttggtaa tcaatctcta acccactttc
     5461 tttggcgtgc tgctttgcca cttcaagcgg ttgagaggtc atatcgatgc cggtaacaat
     5521 cgctccctgt tttgccattg cctcacttaa aataccgcca ccacagccga catctaacac
     5581 ctttttgcca aataaaccgt tcgatttttc taaaatatag gctaaacgca gtggattaag
     5641 cagatgaatc ggcttgaaac tgccgtttgg atcccaccag gttttagcca tattttcaaa
     5701 ttttgtgatt tcttgctgat cgacgttttg cataaactgt tcctatggta aatttagggc
     5761 attactataa cgcatttagc ctaaaaggaa aatcagaatg acccgaatta accttgttcc
     5821 gccaacggaa ttatgcgatc aacatctgct tgccgaacat cgtgaactta ctcggattcc
     5881 gaatgcggta gcgaaaggca aatttagcct aaaaggacag ccagaagatt acaaactggg
     5941 cgagggacac gttcggtttt tcttcaataa actcacgttt ttgaaaaagc gttacgatgc
     6001 gttacacgag gaatgtttag caagaggttt taaggtgcaa tatttctggg cggaacattt
     6061 accacaagat ccctctctct ggctagatta tcagccgact gaaaccgctc tgactgtaaa
     6121 tcgggagcga attgcattaa gaatgccggc aaatccacgt tttagcgaaa gaaaatgacc
     6181 gcttgtacgc ctttttgttg ctttttatgc tataatctcg ccaatttttt cgccttattt
     6241 aaggctcttt tactaataaa attaggaaat ttcaatgagc gaattagcca aagatattat
     6301 tcccgtaagt attgaggacg aattaaaaac ctcttacctt gactatgcga tgtcggtgat
     6361 tgttgggcgt gccttgcctg atgtacgaga cggtttaaag ccggtacacc gccgagtgct
     6421 tttttcaatg gatcaaaaca gcaacaccta taataagccg cacgttaaat ctgcccgtgt
     6481 ggtcggtgat gtgatcggta aatatcaccc acacggtgac tttgcggtgt ataacactat
     6541 tgtgcgtatg gctcaaccgt tctcactacg ttatatgttg gtggacgggc aaggtaactt
     6601 tggttctatt gatggcgatg caccggcagc aatgcgttat accgaagtgc gtatgcagaa
     6661 aattacgcag gaattattaa ccgatctcga taaagaaacg gtggatttct caccgaacta
     6721 tgacggcaaa gagatgattc ctgatgtatt gccaaccaaa attccggctc tgttagtcaa
     6781 tggttcttca gggattgcgg tcggtatggc aaccaatatt ccacctcata atttaggcga
     6841 agtattagat ggttgcttgg cgtatattga aaatgaacag attagtgttg aagagctaat
     6901 gcgttatatc ccggggccgg atttcccgac cggggcgatt atcaacggtc gtaaagggat
     6961 tgaagaggct taccgcaccg gtcgtggcaa ggtgtatgtg cgcgcgaaag ccagcgtgga
     7021 aacaactgat aaagggcgtg agcaaattgt tgtaaccgaa ctgccatacc aagtgaataa
     7081 ggcaaaatta attgaaaaaa ttgccgagct ggttaaagag aagaaaatcg aaggcatcag
     7141 caaaattgat gactattccg ataaaaaagg gatttcgatt gttattgaag tcaagcgtga
     7201 tgcagtgggt gaagtggtgt taaaccacct ttattcttta acccaaatgc aggtcacgtt
     7261 tggtatcaat atggtggcgt tagataatgg gcagccaaaa gtgctgaact tacgccagat
     7321 catcgaagcc tttgttaaac accgtcgtga agtggtcaca cgccgtacga tttttgaatt
     7381 gcgtaaagcc cgtgaacgtg cccatatttt agaaggtttg gcgattgcgt tagcgaatat
     7441 cgacccggta attgaattaa ttcgagcctc aaaaaccgca gaagaagccc gtgaaggctt
     7501 attggctcgc ccttgggcat taggcaatgt tgcaccaatg ttagaggctg ctggtgttgg
     7561 tgcttcccga ccggaagatt tacctgaaca cttaggagtg cgtgatggcg aatactattt
     7621 atctgaagct caagccagag cgattttaga gctacgctta caccgcttaa ccggtttaga
     7681 acacgagaaa atcgttgaag aatacaaaga actcttaact gaaattggcg aattaatcca
     7741 cattttaacc agcccagaac gcttaatgga agtgatccgt gaagagttag aacgtgtaaa
     7801 aaccgatttt aatgatgaac gccgtactga aattaccgca gcctctggcg acatcaacat
     7861 tgaagactta atcgcacaag aagatgtggt ggttacgctt tctcacgccg gctatgtgaa
     7921 atatcagccg ttatccgact acgaagcaca acgccgtggc ggtaaaggta agtcggcaac
     7981 caagatgaaa gaagatgatt tcatcgaaaa actcttggtg gcaaacaccc acgacaccat
     8041 tctttgcttc tcaagccgtg ggcgtttata tcaattaaaa gtgtatcaat taccgcaagc
     8101 aagccgtggg gcaagaggca cgccgattgt gaatattctg ccgttagtga aagaagaaaa
     8161 cgaacgtatt accgcgattc taccgattcc aaacggtgaa tttagtgccg ataagtttat
     8221 ctttatggca acagctagcg gtgtagtgaa aaaagtttcc cttgatgcct ttagcaacgt
     8281 gcgtgcaagc ggtctgattg cgttaaaact tcgtgaaggc gatgagctga tcggggtaga
     8341 tattactgat ggtaacagcg aaattatgtt gttctcggca caagggcgag tagttcgctt
     8401 tgccgaaaca gcagttcgtg cgatgggacg taccgccacc ggcgtacgag gtattaaact
     8461 ttctaccacc gaaatttcaa gcgaagaaat tgaagaagct gaaattattg aaactgacaa
     8521 tgaagaggca gaagattcct ccagcgtcag ccttgataaa gaccgtgtgg tttctttagt
     8581 gattcctcgc accgaaggcg atattttaac cgtcacccaa aacggctacg gtaaacgtac
     8641 ggtgattagc gaatatccgg tgaaatcccg agcaaccaaa ggggtcgttt cgattaaagt
     8701 gaatgaacga aacggcaaag tggttgcggc agttcaagta gaggaaaccg accaaattat
     8761 gttgattacc gatgccggca cgctggttcg cacccgagtg gcagaagtca gcctcgttgg
     8821 acgaaacacc caaggcgtac gtattattcg caccgcagaa gacgaacaag ttgttagcct
     8881 tgaacgagtc tgcgagcctg aagacgatga aaatgaaagc ctagacgcat tagaaaatgc
     8941 cgaaacagca gaaacatcaa ctgaagaata atcttaacta aacaagcggt cgaattttca
     9001 caattttttg caaaaataga aggaaattcg accgtttttg gatcatacag tagataataa
     9061 aaactatggc acttatcaat ctttccaacg cctatttagg ctttggcgat catcctttat
     9121 tggatcatac tgaattacat atcgaacccg gcgagcgggt ttgtttggtg gggcgtaacg
     9181 gggcgggtaa atcgaccctg atgaaaattc tggcgggcga agttcagctt gatgacggca
     9241 agttggtatt tgaaaaagac attgtcgtta cacgtcttga acaagatccg ccccgccata
     9301 ttgaagaaac ggtgttcgat tatgtggcgg aggggattgc ccatcttgcc gacttattga
     9361 agcaatatca ccacatttcc ctgcaaatgc agaccgatta cagcgatgaa ctgctcgcca
     9421 aactttcagc ggtgcaatcg caattagaac acgctaacgg ttggcagttt gaaaaccgca
     9481 ttcaagacac cttgaaactg ctggaactcg cccccgacaa acgcctgtgc gaactctcag
     9541 gcggttgggt acgccgtgcg gcattggctc gggcgttggt tgccgatcct gatgtattgc
     9601 tgttggacga accgaccaac cacctcgaca ttgaggcgat tgcgtggctg gaaaatctgt
     9661 tattggattt caaaggcagt attattttta tctcgcacga ccgtgccttt atccgcaaaa
     9721 tggcgactcg gattgtggat ttagatcgag gcaaattggt ttcctaccca agcaattacg
     9781 ataaatactt ggaagaaaaa gccgaggatc tgcgagtaga agcgttgcaa aatgagctgt
     9841 tcgacaaaaa actcgcccaa gaagaagtct ggatccgtca agggattaag gcaagacgca
     9901 cccgaaacga agggcgtgtg cgagcgttga aagcgttgcg tgaagagcgt agaaaccgcc
     9961 gagaggtaca aggcacggcg aaaattcaga tcgacaacac cgcacgcagc ggcaaaattg
    10021 tgtttgaagt ggaaaatgcc ggctatgaaa tcggcggcag aaccctgctg aaaaatttca
    10081 gcaccaccat tttgcgtggc gataaaattg ccctgattgg agcgaacggg atcggcaaaa
    10141 ccacgctgat caagctgtta cttggcgaaa ttcagccgac atctggttca gtgcgttgtg
    10201 gcacaaaatt ggaagtggcg tacttcgacc aataccgagt cgatcttgac cctgaaaaaa
    10261 ccgtgatgga caacgtggca gacggcaagc aagatgtaga agtaaacggg gtgaaacgcc
    10321 acgttcttgg ctatctgcaa gacttcctgt tcccgccaaa acgggcgatg acaccggtga
    10381 aagccctctc gggtggtgaa cgcaactgct tgttgctggc aaaactgtta ctcaaaccga
    10441 acaacttgct gattttggac gaaccgacca acgatttgga cgtggaaacc ctcgaactgc
    10501 tggaagagat gctcaccgac tatcaaggca ccctgattat tgtgagccac gaccgtcaat
    10561 ttgtggataa taccgtaacc gaatgctact tcttcgaggg cgaaggcgtg gtgaataaat
    10621 atgtcggcgg ctatttcgat gccaaacaac agcaggaaaa ttacttcgcc gccactgccg
    10681 acaagcggtt aaattcgagt aaaaatttgc aaaaaataga ggaaaaagca ccgcttgcgg
    10741 agcaagagaa acagaaagcc gatcaggaaa aaacgaaagc agagccgacg aagaaaacca
    10801 aactttccta caaagaacag cgtgaactgg acgagttacc ggctaaaatg gaacagcttg
    10861 aagccgacat tgaagccctg caagccgaag taaatagtgc cgaattcttc gccaaagatc
    10921 caagctacac caacgcccag ctacaaaaac ttgccgatac cgaagccgcg ttagagcaag
    10981 cctttgagcg gtgggaagcg ttggaaaata ttaaaaacgg gaatatctaa tgtaggggcg
    11041 aatgattatt cgcccttgat ggataaaatg attgggcgaa aaatttttcg cccctacaaa
    11101 tgtgaagcaa aatgacagaa agattagata actacgaaca acgttttggt ggcattggtc
    11161 gcctttatac gccggaagga ttggagaaac tacgccgttc gcatatttgc gtgattggga
    11221 ttggcggggt tggctcgtgg gcagtggagg cattggctcg ctcaggtatc ggtaagatca
    11281 cgatgatcga tatggacgat atttgcgtga ccaatatcaa ccgccaaatt cacgcaatga
    11341 gtggcacggt ggctcaactg aaaaccgaag cgatgaaaga gcggattgag cggatcaacc
    11401 ctgaatgtgt ggtggaaatt attgatgatt tcttaacgca ggataatctc gcagactacc
    11461 tcaatcgagg atatgactat gtgatcgatg cgattgacag tttgcgggta aaagcggcga
    11521 tgattgcgtt ttgtaaacgc aataagatca aaattatcac caccggcggg gcgggcgggc
    11581 agaccgatcc gaccaaaatt caaattaccg atttaagcaa aacggtgcaa gatccgttgg
    11641 cggcaagggt tcgtagcctg ttgcgtaaag agtacggttt cagcaataaa aacaaattcg
    11701 gcgtggagtg cgtttcttcg actcagcaac tgattttccc acaaatgggt gaggcctgtg
    11761 aggtgtcggc aacaatgaac tgtgccaacg gctttggagc ggtgacaatg gtgacggcaa
    11821 cgttcggctt ttttgcggtg agtcgggtga ttgataaact attaaaataa caagcggtca
    11881 tattaaatga attttttgca aatcaaggag taaataatgg caatacatcg agtcaacccg
    11941 aaagggagta tggaacagct ttcccatttg gaaatggagt tgttggcaaa gaatacgcag
    12001 ggtaatttgc atcaacttta tcgtaattgc tctttggcgg tgctaaattc cggtgtgcat
    12061 accgatgaca gccgagcgtt gttaagccaa taccctgatt ttgaaatccg cttattaacc
    12121 cgtgaaaaag gcgtgtcgct tgaattgcat aatccacccg aaactgcgtt tgttgacggc
    12181 aagatgattt tgaatattca atatcacctt tttgcggtgc tgcgggatat tgtgtttgtg
    12241 aatgcgttaa aaaatgcgat tagaccgctt gaagagactt ctttagaagc cttaaccacg
    12301 aataccgtat tttcgatttt gcggaatgcg aaagcgattg aaatgaatac cgacccaaat
    12361 ttggtggtgt gctggggagg gcattcgatt aatgaaaccg aataccaata ttgccgtgcc
    12421 gtcgggcaag agtttggctt gcgtgagctg aatattgtga ccggttgcgg agccggtgtg
    12481 atggaagccc cgatgaaagg agcggctatc ggacacgcca atcaacgtta taaaaacggg
    12541 cgttttatcg gcattaccga gccgtctatt attgcctccg agccgccaaa cccgattgtg
    12601 aatgaattgg taattatgcc ggatattgaa aaacggttgg aagcctttgt gcgtttaggg
    12661 cacgccattg tggttttccc gggcgggccg ggaacgctgg aagagttgct gtatattatc
    12721 ggtattaagt taaacccggc taaccatgct cagcaattac cactgatttt aaccgccccg
    12781 aaagaatcgg cagactattt ctatgccatc gatcaattta ttggcgaaac tttaggcgaa
    12841 gaagctcgca gtttgtatga aattattatt gatgactcgg tgttggtggc tcgtaaagtc
    12901 aagcaagcga tgattgaggt aaaaagcagc cgttatgaaa gtggcgatgc ttataatttc
    12961 aactggtcgt taaaaattga ggaagatttt attacgccat ttattccaac ccacgaaaat
    13021 atggcaaacc tgaatttaag tttagcacag ccaaaagagc agctggctgc gaatttaaga
    13081 cgggcatttt cagggattgt tgcaggtaat attaagccgg agacctccga tttaattgag
    13141 aaatatgggg tgtttaaatt acacggcgat cgtaaattaa tggagcatat agataaactg
    13201 ttggagcgtt ttgtggttca acaccgtatg aaaattccaa cgggtgaggc gtaccaacct
    13261 tgctatgaaa ttgtaaaagg gtaatgctaa caaggggtaa ggtatgtatt taaagcatat
    13321 tgaaatcagt ggctttcgtg gtattaacca tttatcgctc cagctacgac caaatatggt
    13381 attgattggc gaaaatgcgt gggggaaatc cagtctgatt gatgcattaa gcctgatttt
    13441 taaccttgag caggcgttgt atcaatttca gttcaaagat ttccatattc aatacaccga
    13501 tacccccaac caagtgcggg acattcaact ggtgtttacc ttttgtgaag agcatcagca
    13561 cgatttagcg gtgcaatttc ccgcttattt ggcacaagcc gcgttttata ttgataatca
    13621 ccgctgtgtt tcgcttgccg taaccggaaa attacacgga gagcagatta gcaccgacta
    13681 tcaatttgtg gatcaaagcc taaaaccgat ccagatagaa caagcggaaa acgccattcg
    13741 gcagtttatt taccatcacc ctgtttatcg cctgcgtgat gcaaggctca ataacagggt
    13801 gcataatgaa ttattactta aaggatcgtc tcaacttgaa gacgattttc aacgtgaatt
    13861 aaacgccctc tcttcgctac tgaaatacta ttttctaacc agccaaagtc gctatttgat
    13921 caaaaccagt atgcaagaca ccgcattgtg gtgggaaaaa gtaaaatccc tctgtttacg
    13981 cctaaaacag cagccggaat tggtcgaatc tgctcagcag catatttcta ctctattttt
    14041 gtttaatcct agatctacag taatagaaaa gccgattatt ttatttgaag atctgaatgc
    14101 tcaactacac cctcgaatga ttgcgatttt ttgggaactg ctcggttttt tacccagcca
    14161 acggatcacc actactaatt ctattgaatt gttatcgcaa gtgcctctgc gtgaaatctg
    14221 ccgtttggtg cgtcatcacg atcataccca agcctattgg cttgaacgcc acagtttagg
    14281 caaggaagat ttgcgaaaat taacctttca tattcaccat aatcgtggct tggcactgtt
    14341 tgctaaagcg tggattttgg ttgaggggga aacggaggtt tggattttgc aagagctggc
    14401 gagattatta gatattcatt tggaaatgga agggatcaaa atcgttgaat ttgctcagtg
    14461 tggcttacgt ccgttaatta aatacgccag agcaatgggg atcgaatggt atgtgctgac
    14521 tgacggtgac gattccggca aacgttatgc agatacggta aaaagtatgg aagaggattt
    14581 tgctcaccgg ctcacgatgt tgccacaaaa agatatcgaa cattttttct acaaagcagg
    14641 cttgcggaat gtgtttatac agcttgcaaa ttggcgttca caagaaaaat atccggtgtc
    14701 ctacatcatt aaacgagcga ttcaacgaag ctcaaagcct gatttagcca ttgcattagc
    14761 caatgagatg gggcaacggg gagagcattc aattccaact ttatttaaac aattatttgc
    14821 agatgtgctg gcattgataa acaaagtata gaatacaagc ggttaaattt gacaaaaaat
    14881 tgccaatttt gaccgcttgt ttgcttgtga tgaaaaccaa tcatacaaaa ctctaattta
    14941 tttcaagtgc aagctattat tttatgcgtt atgcttattt ggaataaaaa aatcgggtta
    15001 gttgattgac atagcattct agacgtctaa aataaccaaa aataatagtt aattgaatgt
    15061 ggataaatag aaaatgattc agctgaaaaa tatcagcaaa caatttgagg taaagggcaa
    15121 aaaaattacc gctctggata atgtaaacct agaagtacca agaggcacta tttatggtgt
    15181 cattggggca tcaggggcag gaaaaagtac cttaattcgc tgtgtaaatt tattagaacg
    15241 cccaacaatc gggcaagtga ttgtcgatgg gcaagattta acggcaatgt cggataaaga
    15301 gttgattcac gctcgccgta atattgcaat gattttccaa cattttaatt tgctttcatc
    15361 acaaactgta tttgaaaacg tggcgttatc gttgcgttta agcaatacgc caaaagagca
    15421 agttgagaag aaagtcaatg agctgttgga tttagtgggg ttaacagatc gtaaagatgt
    15481 ttaccctgca aatctttccg gtgggcagaa acagcgtgta gcgattgctc gtgcgttagc
    15541 cagcgatcca cacgttttgt tgtgtgatga agcgaccagt gcgttagatc cggcgactac
    15601 gcaatccatt ttgcagctat taaaagatat taataaacgt cttggtttga cgattttatt
    15661 aatcactcac gaaatggaag tggtaaaacg catttgtgac cgagtagcag tgattgataa
    15721 agggcagttg attgaatctg gctcggtaag tgaaattttc tcgaatccga aaaccgaatt
    15781 agctcagaaa tttattcaat cgactttcca ttttgaatta ccgcaagaat ataccgagca
    15841 gctttcaagt tcgccgactg aacatagtaa gccgattatt aaatttgagt ttaccggacg
    15901 ttcggtggat gcacctttgc tttcaatggc atcgaagaaa ttcggcattg attttagtat
    15961 tttgatgtcg caaattgatt atgcaggcgg ggtcaaattt ggatttgtaa ttgcagaagt
    16021 gagtggtaat ccggattcca ttgcagaggc aaaattttat ttaattgata acaatgtaaa
    16081 agtagaggtg ttaggctatg tgggctgatt ttatgcagga gatgacgcca cagatgtgga
    16141 gcttagtatg ggaatctact tttgaaaccg tttatatggg ctttgtggca acggcattgg
    16201 cggtagtcat cggtttaccg attggtttct tggcgttttt aaccggtaaa ggcgaaattt
    16261 tagaaaatcc gagattacac caagtgttag atgtcgttat taacatcggg cgttcgattc
    16321 cgttcattat tttattgatt attttgttgc catttactcg cttagttgtg ggcacaacat
    16381 taggcacaac ggcagcgatt gttcctttaa gtgtttcggc cattccgttt tttgcccgtt
    16441 taacttcaaa tgcgttgctt gaaattccgt ccggtttaac agaagcggca aaatcaatgg
    16501 gagcaacaaa ttggcaggta gtgacaaaat tttatttacc ggagtcatta ccgattttga
    16561 ttaatggcat tacgctaacg ctggttgctt taattggcta ctcagcaatg gcgggggctg
    16621 ttggtggcgg cggtttaggc aatttagcga ttagctatgg cgaacaccgt aatatggtgt
    16681 atgtgaaatg gattgctacc attattattg ttgcgattgt gatgattagc caaaaattgg
    16741 gtgatcattt agcaaaacgt tacgatcatc gttaatttta tttaaaaaga ggtttctatg
    16801 agtttcaaga aaattttagg cgttgcattg gtttctgcat tagcattaac cgcttgtaaa
    16861 gaagagaaaa aggcagaatc taccgctgct ccggcagctc aagctccggc taaaatcaaa
    16921 gtaggggtaa tgtcaggccc tgagcatacc gttgcagaac gtgcagcaca gattgcaaaa
    16981 gaaaaatatg gtttagaagt tgagttcgtt ttatttaacg actacgcttt accgaatact
    17041 gcagtaagta aaggtgattt agatgcaaac gcattccaac acaaaccata tttagataaa
    17101 gacagccaat caaaaggttt aaacaactta gtgattgtgg gtaacacctt tgtttatccg
    17161 ttagcgggct actctaaaaa agtgaaaaat gtgtctgagt tagcagaagg tgcggtaatt
    17221 gcagtaccaa atgatccttc aaacttagct cgtgctttga ttttattaga aaaacagggg
    17281 ttaattaaat taaaagataa taccaattta ttctcaactt cagtggatat tatcgaaaat
    17341 ccgaaaaact taaaaattaa agaagtggat acttcaattg ccgcaaaagc gttagatgac
    17401 gtagatttag cggtggtaaa taacacttat gccgggcagg taggcttaaa tacccaagat
    17461 cacggtgtat ttgttgagtc taaagattca ccgtatgtga atattattgt ggctcgccaa
    17521 gacaataaag atgcagctaa tgtacaaaac tttattaaat cttaccaaac cgaagaagtg
    17581 taccaagaag cacaaaaaca ctttaaagat ggtgtagtaa aaggttggta atttagctga
    17641 tttttactta aatggcgatt aagcgctagg ttaatcgcca ttttcatctt taaaatatag
    17701 gaaggagcaa acaatgaact ttaaaaaatt attaggtgtg gcgttagtat ctgccttagc
    17761 acttactgcg tgtaaagatg aaaaagcaca agcacctgct acaacagcta aaactgaaaa
    17821 caaagcccca ttaaaagtgg gtgtgatgac cggccctgaa gcccaaatga ccgaagtggc
    17881 agtgaaaatt gcaaaagaga aatatggctt agatgtagag ttagtgcagt ttactgaata
    17941 cactcaacca aatgccgcac ttcattctaa agatttagat gctaacgcgt tccaaacggt
    18001 gccttattta gagcaagaag tgaaagatcg tggttataaa ttagcgatta tcggcaatac
    18061 gctagtatgg ccaatcgcgg cttattctaa aaaaattaaa aacatttccg agttaaaaga
    18121 cggagcgact gttgcgattc caaacaatgc aagtaatact gctcgtgcgt tattattgct
    18181 tcaagctcac ggtttattga aattaaaaga tccgaaaaat gtgtttgcta ccgaaaacga
    18241 tattatcgaa aacccgaaaa atatcaaaat cgtacaggcg gatacctcac ttttaacccg
    18301 tatgttagat gatgtagaac ttgcggtaat caacaacact tacgcaggtc aagctgggtt
    18361 aagtccggat aaagacggta ttattgtgga atctaaagat tcaccgtatg tgaatttagt
    18421 ggtaagtcgt gaagataata aagatgaccc acgcttacaa acttttgtga agtcattcca
    18481 aaccgaagaa gtattccaag aagcgttaaa attatttaac ggtggtgtgg tgaaaggttg
    18541 gtaatcagtt ggacggcata ttctgccgtc cttttcttaa aaggagaaac agataatgaa
    18601 aataatgaaa ttagccggtg cagttgcaat tttctcgctt tttttaaccg cttgtaatga
    18661 taaagccgaa aagttgaaag tcggtgtgat ttccggccct gaacataagg taatggaagt
    18721 ggcggcaaaa attgcaaagg aaaaatataa ccgtgatgtt gaattagtgg tatttaccga
    18781 ttatgccacg cctaatgcag ctttagataa aggcgatctt gatttgaatg ctttccagca
    18841 taaaccttat ttagataacc aaattcagga aaaaggctat aaattagtgc cggtcggcaa
    18901 tacttttgtt tatccgattg cggcttattc caaaaaaatt aaatcgctgg cagagttgaa
    18961 agatggtgat actattgcag tgcctaatga tccgactaat ttagcccgtg ctttaatttt
    19021 attggaaaaa caagatttaa ttaagctgcg agcagatgca ggcttaaaag caaccagtgt
    19081 ggatattatt gaaaaccctc gtaaattggt gatccaagaa attgaagcac cattattgcc
    19141 tcgaacgttg gacgatgttg ccttttcgat tattaatact acctacgcag ggcaaaacgg
    19201 tttaacgcca accaaagacg gaatattcgt tgaagacaag gattcgcctt atgtgaattt
    19261 aattgttgcc cgtgaaaata accaacattc tgaagccgta aaagatttgg tgaaagccta
    19321 ccaaacagaa gaggtgtata acaaagcgaa tgaagagttt aaaggggcga tgataaaagg
    19381 ctggtaattg aagataaata aggcatagat tcctatgcct tactttttat gttacagacc
    19441 tgctccggct cttaatgctt cggctttgtc agttttttcc caaggaaaat gtttacgacc
    19501 gaagtgtccg taggcagcgg tttcacggta gattggtttg attaaatcta acattttgat
    19561 taagccatac gggcgtaagt caaagttttg gtagattaat ttcacaagta tttcgttgct
    19621 cactttacct gtgccgaagg tttcgaccat aattgatgtt gggtcagcca ccccgatagc
    19681 ataagaaagt tggatctcac agcgatcggc taagcctgcg gcaacgatat tttttgcgac
    19741 ataacgagca gcataagcag cagagcgatc cacttttgac gggtctttac cagagaatgc
    19801 accaccaccg tggcgagccg caccaccgta ggtatctaca atgattttac gcccggttaa
    19861 accacagtca cccattggac cgccaatcac aaaacgaccg gttgggttga tgaaatattt
    19921 ggtgttttgg ctgagccatt cgcttggtag taccggtttg atgatctctt ccatcacccc
    19981 ttcaattaac tctttttgcg aaatatgctc tgcgtgttgt gtagaaagca ctacggcatc
    20041 aatgccgata attttattgt tctcataagc aaatgttaat tggcttttag cgtcagggcg
    20101 taaccaatcg agtttgcccg atttacgcac ttttgactgc tgttccatta agcggtgtgc
    20161 gtaagtaatt ggagccggca ttaacacctc ggtttcattg gtagcgtagc caaacataat
    20221 cccttggtcg cccgcacctt gctctaacgg atcggcacgg tcaacgccct ggttgatgtc
    20281 cggagattgt ttaccaatcg catttaatac cgcacaagag tgagcatcaa agcccatatc
    20341 agagtgagta tagccgatgt cgcaaatcac ttggcgggtt aagttttcaa tatccaccca
    20401 cgcagaggta gtgatttctc cccctactaa tgccataccg gttttcacat aagtttcaca
    20461 agcaacgcgt gctttagggt cttgttttaa aatttcatct aataccgcgt ctgaaatttg
    20521 gtctgcgatt ttatccggat gcccttctga aaccgattca gaagtaaata aattaattgc
    20581 cattt
//
LOCUS       DANLXO010000039        20568 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.039, whole genome shotgun sequence.
ACCESSION   DANLXO010000039 DANLXO010000000
VERSION     DANLXO010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20568
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.039"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(89..1024)
                     /gene="ftsX"
                     /locus_tag="PXD69_001198"
     CDS             complement(89..1024)
                     /gene="ftsX"
                     /locus_tag="PXD69_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HDL6283405.1"
                     /translation="MIRSFSKLGAQTNYSLRAVWQDLMQRKLGTFLTVLVIAVSLTIP
                     TVSYLLWKNTHEAATQFYPEPQLTVYLHKNLAEHDVNTVVDRIRAFETDKIESFNYIS
                     RQQSLDEFRSWSGFGEALDILDENPLPAVVTLKPKANFNNADTMVELRNGLQQIKGVQ
                     EVRLDNGWLEKLTALTWLIARIAVVCTLLMLLAVFLVIGNSVRTDVANSKAAIEVQQI
                     LGATDHFIARPFLYTGMIYGLFGSLLAVLFSAVTISYFTGVVKYVTDMFTVQFELNGL
                     DFSEAFFLVVLCVFIGWLSAKIATMRNIFRIGSRG"
     gene            complement(1034..1687)
                     /gene="ftsE"
                     /locus_tag="PXD69_001199"
     CDS             complement(1034..1687)
                     /gene="ftsE"
                     /locus_tag="PXD69_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HDL6283406.1"
                     /translation="MIKFTNVNKVYKGGKPALQGIDFHLPAGGMAYITGHSGAGKSTL
                     LKLIMGIERANGGQILFNGHDITRLAHHELPFLRRQIGMVHQDYRLLTDRTILDNVAL
                     PLIILGMNQAIVEREARIALERVGLADKANYLPLHLSGGEQQRVDIARAIVHRPTLLL
                     ADEPTGNLDEKLSFEIFRLFEEFNQAGTTVLIATHDTNIISKRPKPCLVLEQGHLKF"
     gene            complement(1680..3176)
                     /gene="ftsY"
                     /locus_tag="PXD69_001200"
     CDS             complement(1680..3176)
                     /gene="ftsY"
                     /locus_tag="PXD69_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDL6283407.1"
                     /translation="MSEKKKGFWSWLGFGKKEEAEQKEIQQEQESIQPEQPVIVEPET
                     EKSFSEKLDELEDKIEEKVDQLEDYFEEKEEKIEQFAEQVEDTIEQKVEDFKEFVEEK
                     VEEAKAFFDDVEDKIEQTFEEQKGEQAVENLQNIATEQLDLNEQEQVTYQVEEAVAEE
                     VAETELVNNVQDTVEESTIQDEYQEKPSQGGFFSRLIQGLIKTKQNIGSGFRNFFRGK
                     KIDDELFEELEEQLLVADLGMPTTQKIINNLTQHATKQQLKDADLLYQQLKVELGEVL
                     KPVAQPLVLEAKKPYVILMVGVNGVGKTTTIGKLARKFQQEGKSVMLAAGDTFRAAAV
                     EQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAAAKGIDVLIADTAGRLQNKNNLMD
                     ELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAK
                     GGVIFAIADQFNIPIRFIGVGEKIEDLRPFNAEEFIEALFSHEDEQND"
     gene            3255..3845
                     /gene="rsmD"
                     /locus_tag="PXD69_001201"
     CDS             3255..3845
                     /gene="rsmD"
                     /locus_tag="PXD69_001201"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDL6283408.1"
                     /translation="MKKNRNSPQSVQQMGEVRVIAGLWRGRKLPVLNAEGLRPTTDRV
                     KETLFNWLMHDIAHSRCLDCFAGSGSLGIEALSRQAQAVVFLEKFANAANQLKKNLQA
                     LKSEQGSVIHTDTLAYLAQKNNGEPFNIVFIDPPFHQGFVPQVLNLLAENNWLAPNAI
                     LYVETEKNHPPLELPQGWQILKEKAAGMVVSRLIQL"
     gene            3929..4243
                     /locus_tag="PXD69_001202"
     CDS             3929..4243
                     /locus_tag="PXD69_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HDL6283409.1"
                     /translation="MKKLTPDEAIDIAYDIFLEMAGENLDPADILLFNLQFEERGAVE
                     MVETSEDWDQEIGTLIDPDAFAEVWVGLVNEQDEMDDVFARFLISHDEENREYHVVWK
                     EK"
     gene            4256..4768
                     /gene="hpaC"
                     /locus_tag="PXD69_001203"
     CDS             4256..4768
                     /gene="hpaC"
                     /locus_tag="PXD69_001203"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HDL6283410.1"
                     /translation="MANIDTNQPIEASLKFREAMAHLSSAVSIVTTNGVAGKAGLTVS
                     SVCSVTDSPPTLLFCINKNSHVHDIIQQNGKVCVNVLSHEQEDLAKHFAAILESTMEE
                     RFGWDIWNNGFDDQPVLRSAISALQGNIVDTHAVGTHTIFVVEVSHIDVEPNHSLVYF
                     ARQFRSVNID"
     gene            4886..5758
                     /gene="tehB"
                     /locus_tag="PXD69_001204"
     CDS             4886..5758
                     /gene="tehB"
                     /locus_tag="PXD69_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HDL6283411.1"
                     /translation="MENLICYKQMPVWTKATLPQMFQEKHNTKVGTWAKLTILKGSLK
                     YYELTEEGEIIKEDIFDANHQRPMVEPQLWHKVEALSDDLECQLAFYCKPEDYFAKKY
                     NLTATHSEVLNAVNYTKGGKALDLGCGRGRNALYLNLLGFDVTAVDHNQESIDFLNYM
                     IEKEQAQNITTAVYDINEATIGSQNGEYDLIISTVVMMFLNRERIPAIIENMQKNTKV
                     GGYNLIVCAMSTDDYPCPMPFSFTFKEGELADYYQGWELVKYNEDLGHLHKTDENGNR
                     IQLRFATMLAKKIS"
     gene            5896..6933
                     /gene="purM"
                     /locus_tag="PXD69_001205"
     CDS             5896..6933
                     /gene="purM"
                     /locus_tag="PXD69_001205"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011962107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDL6283412.1"
                     /translation="MSNTQLSYKDAGVDIHAGNELVERIKPDVKRTRRPEVMGGLGGF
                     GALCALPTKYKEPILVSGTDGVGTKLRLAIDLNKHDTIGQDLVAMCVNDLVVQGAEPL
                     FFLDYYATGKLEVDVATNVVKGIADGCVISGCALVGGETAEMPGMYHEGDYDLAGFCV
                     GVVEKSKIIDGSTVKTGDALIALASSGPHSNGYSLIRKVLEVSRSNPATDLLEDKPLS
                     EHLLAPTKIYVKSILKLVEEVDVHAIAHLTGGGFWENIPRVLPESAKAVIDESSWQWP
                     AIFSWLQEKGNISRYEMYRTFNCGVGMVIALPERDVEKALTLLKESGENAWLIGKIED
                     LGTGSEQVEIR"
     gene            7011..7289
                     /locus_tag="PXD69_001206"
     CDS             7011..7289
                     /locus_tag="PXD69_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HDL6283413.1"
                     /translation="MQLFWPIYFVLMNLAALYLMYSDKQKAIKKEWRVPEITLLSFCL
                     LGGAIGVYLGMKYFRHKTQHWYFHVAVVLSTFAWLIGLPYFYLALSSY"
     gene            7432..8859
                     /gene="aspA"
                     /locus_tag="PXD69_001207"
     CDS             7432..8859
                     /gene="aspA"
                     /locus_tag="PXD69_001207"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDL6283414.1"
                     /translation="MSDVRIEHDLLGEREVPNSAYWGIHTLRAIENFNISNVTISDVP
                     EFVRGMVMVKKATALANGELGAIPKKIAKAIVAACDEVLVKGRCLDQFPSDVYQGGAG
                     TSVNMNTNEVIANLALEILGEAKGKYDIVNPMDHVNASQSTNDAYPTGFRIAVYNSIT
                     KLINKITYLQTAFENKATEFSDVLKMGRTQLQDAVPMTLGQEFKAFAVLLDEEVRNLK
                     RTAELLLEVNLGATAIGTGLNTPEGYSTLAVKYLAEVTQLPCSLSENLIEATSDCGAY
                     VMVHGALKRTAVKLSKVCNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEV
                     VNQVCFKVIGNDTTVTFAAEAGQLQLNVMEPVIGQAMFESIELLSNACINLRDKCIDG
                     ITANRDICQNYVFSSIGIVTYLNPFIGHHNGDIVGKICATTGKSVREVVLERGLLTEE
                     QLDDILSIENLMNPTYKAKRFTEEE"
     gene            complement(8934..10952)
                     /gene="rep"
                     /locus_tag="PXD69_001208"
     CDS             complement(8934..10952)
                     /gene="rep"
                     /locus_tag="PXD69_001208"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HDL6283415.1"
                     /translation="MKLNSQQQQAVEYTKGACLVLAGAGSGKTRVIINKIAHLIAHCG
                     YSPKQIAAVTFTNKAAREMRERVDHSIGKENSKGLTISTFHTLGFEILKREYKLLGFK
                     SGMTLFDEQDQIALLKHLLPENVTEDKDLLKALIATISNWKNDLLSPERVLTRVRDER
                     ERVFSHFYQLYQNQLKAYNALDFDDLIMLPVLLFRQFPEAKSRWQQKIRYLLVDEYQD
                     TNTSQYELIKLIVGNEPNFTVVGDDDQSIYSWRGAKPENMQRLREDFDLQVIKLEQNY
                     RSSQRILHCANILIDNNDHLFSKRLFSELGQGEKLQVIEAKNEEHEAERIVGELIAHR
                     FSKKTKYKDYAILYRGNHQSRLLEKLLMQNRIPYKISGGTSFFARAEIKDMMAYLRLV
                     VNQDDDAAFLRIVNTPKREIGAATLEKLGILANEKQVSLFEAIFDFELIQRLTPKPYQ
                     ALQDFARWIVEIADQADRSDPIEAVKDLLAKIQYEAYLYEMAANPKVAEMQSRNVQTL
                     FEWVQAMLEGDEIEPPMNLVQVVNRLTLRDMLERGEEDDEADQVQLMTLHASKGLEFP
                     HVFLIGMEEGILPHQTSLDEDNVEEERRLAYVGITRAQQTLTFSLCKERRQYGEIIKP
                     EPSRFLLELPQDDLEWESEKPRMTEQEKEAKSSANIANLMAMLKANKK"
     gene            11200..12315
                     /gene="potA"
                     /locus_tag="PXD69_001209"
     CDS             11200..12315
                     /gene="potA"
                     /locus_tag="PXD69_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HDL6283416.1"
                     /translation="MEKVEQKAIIELKNVTKSYGSKTILKNLNLTINDGEFLTILGPS
                     GCGKTTALRLIAGFEDLTEGSIILDGQDVSNVPAEQRPVNTVFQSYALFPHMTIFENV
                     AFGLRMQKVPNAEIEPRVMEALRMVRLEDRAQQKPAQLSGGQQQRIAIARAVVNKPKV
                     LLLDESLSALDYKLRKEMQNELKALQRQLGITFIFVTHDQEEALTMSDRIIVMNAGKI
                     AQDGTPREIYEEPSNLFVARFIGEINVFDATVIERVDATNVKANVEGRICNIKVEDLE
                     VQPNQKLKVLLRPEDIVIEELDENESSKAIIGHIIDRNYKGMTLESSVRLDHNGMNVL
                     VSEFFNEDDPNIDHEVGQKVALTWYEGWEVVLNDEGE"
     gene            12302..13165
                     /gene="potB"
                     /locus_tag="PXD69_001210"
     CDS             12302..13165
                     /gene="potB"
                     /locus_tag="PXD69_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HDL6283417.1"
                     /translation="MKANNKFQNGAVATIFGWLLLFVLVPNVLVLIISFLTENRQSQY
                     FVDFAFSFDAYKSLFNDTYAAVLWNSLYMAGIATFFCLIIGYPFAFFIAKMPERIRPF
                     LLFLVVLPFWTNSLIRIYGIKIFLGVKGFLNESLMALGIISEPMRLLNSEIAIIIGLV
                     YILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPLTMPGIVAGCLLVLL
                     PAMGMFYVADLLGGGKTPLVGNIIKSLFLNTNQFALGSAVSIALTILMALMLYVYYRA
                     NKLLNKKVELE"
     gene            13165..13932
                     /gene="potC"
                     /locus_tag="PXD69_001211"
     CDS             13165..13932
                     /gene="potC"
                     /locus_tag="PXD69_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HDL6283418.1"
                     /translation="MKKMFRNLFMLVVFAYLYIPIIILVINSFNEDRFGLNWKGFTWN
                     WYERLFSNDTLVQATLNSLTIAFFAATFSTILGALTSIALYRYRFRGKKLVGGMLFVV
                     MMSPDIVMAVSMLVLFMILGIKLGFISLLIAHITFCLPYVVIAISSRLSDFDGKMLEA
                     AKDLGASEVTILRKIILPLALPSIISGWLLSFTISLDDVIVSSFVTSPSYEVLPLKIF
                     SLVKTGVTPEVNALATIMIIFSLTLVVLSQLVVKKKV"
     gene            14133..15056
                     /gene="oppB"
                     /locus_tag="PXD69_001212"
     CDS             14133..15056
                     /gene="oppB"
                     /locus_tag="PXD69_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HDL6283419.1"
                     /translation="MLKFIFKRLLEAIPTLLILITFSFFLMRLAPGSPFTSEKAYPPK
                     VMANIEAKYHLNEPLYKQYFLYMENLSKGDFGPSFKYKDQSVNNLIASAFPVSIKLGI
                     TAFIFAVLIGLTAGTIAALKQNSKWDYLVMGFSMTGIIMPSFVFAPLLVLMFAIYLKW
                     LPAGGWNGGQLYYMVLPVLSLTISYVAGIARITRGSMIEVLHSNFIRTAKAKGLPMRK
                     IIFKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGTLTILFNAIVDILYAVIDPKIRYS"
     gene            15071..15970
                     /gene="oppC"
                     /locus_tag="PXD69_001213"
     CDS             15071..15970
                     /gene="oppC"
                     /locus_tag="PXD69_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HDL6283420.1"
                     /translation="MQNSSKNQPLVEVTSTIQGRSLWQDARRRFFRNKAAVASLIILC
                     CIILFITFAPMLMPFSYEDTDWNMMGIAPDFESQHYFGTDSSGRDLLVRVAIGGRISL
                     MVGIAGALIAVLIGTIYGAISGYFGGKVDMVMMRFLEILSSFPFMFFVILLVTFFGQN
                     IFLIFIAIGMVAWLNLARIVRGQTLSLKNKEFVEAAIVCGVSRRQIIWRHIVPNVLGL
                     VVVYASLEVPSLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMETSPWLLAFPAFFL
                     CLTLFCFNFIGDGLRDALDPKDK"
     gene            15980..17575
                     /locus_tag="PXD69_001214"
     CDS             15980..17575
                     /locus_tag="PXD69_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283421.1"
                     /translation="MELLAVNNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGS
                     GKSVTSMAIMQLLPKNIVSFGERSSIIFEEQNLLTLSEKAMQTVRGDRIGMIFQEPMT
                     SLNPYMPIGKQVAETVQTHNPQISNAEAEKMVLETLQKVKIPDAEKKMICYPHEFSGG
                     QLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLR
                     LVHKYSDLVCVMQNGEIIERGETETVFTNPQHPYTVELLTPIPTNLKGELPPNAPTLL
                     QGEHIKVDYILKRSLFGKPKKVFNALKDISLHLKTGETLGIVGESGSGKSTLGRAIMQ
                     ILDYRGNITFAGKTLANLNKAERQALKKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVH
                     CPQMSKTERREKVMKMLEEVNLNPAMINRYPHEFSGGQRQRIAIARAIILEPKFVLLD
                     EPTSALDRSTQITVIELLNRLQKKYGLSYIFISHDLAVIKALSDRVIVMSQGEIVESG
                     DVTQIFENPQQEYTKRLILASNL"
     gene            17755..18150
                     /locus_tag="PXD69_001215"
     CDS             17755..18150
                     /locus_tag="PXD69_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6283422.1"
                     /translation="MKKLMIFATTAMIVSNLAHAAGEQSDAREAHESTVKTSTVKYSC
                     QNGKKLSVKYGFNKQGIPTYAEAKLSGKKRFMPINLYTTDATGTNFGDENNFSLYGDP
                     MEFTNHRKASVNIQSPASEILYKGCTPQK"
     gene            complement(18360..20519)
                     /locus_tag="PXD69_001216"
     CDS             complement(18360..20519)
                     /locus_tag="PXD69_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL6283423.1"
                     /translation="MQIKQTVLAIAITPFISQLSLAQETKISSIELDTIEVNEQQENL
                     LKQQAVMSNEDLVRYSTDMGVPQTGRFGPQGFNIRGVEGNQVAVTVDGISQAASNNYA
                     TFSRYSYYNKSRPEIDTELMSDVTIEKGSSTKVGNGALGGSVNYKTKTVSDILMKGRQ
                     FGGMLKYTYNGQNKENIETAGIAADGQYADALVMYSHRQGHETQTTSKGPDIMGSGRG
                     LPNPYKNNQYSYLAKLGLKWNDENRLELKTSKQRSKNAGQELSYSTVTLRDFLDVQEI
                     ETYGVTYLYTPKNSILENIKVAVTKQDTEISGINDQITIARGTKTDNTKRAFNTKNVE
                     GSLGVTFKPVDLGNTEHKLSTELGYGVSDFSFDMQTYTAGITPTDQNMQSPAKTKSFH
                     ILMGDSILLTQNLSAHLNARLSSQKLHSDDNSLSDKTFNNWAGDIGLNYQLSPVWQIG
                     YKLSRGFRTPTASEMFFNREVQGRGASQTFLANTNLKPETSLGNEISLVGNGSLGSLS
                     VAAYHTHYRNLIDLATIGNNIYQSQNVNRAKIKGVDINGTLDLNTAWNAIPQGFELNG
                     GFGYARGKRNDGTDLLTVQPLKALFGIGYRAVNNDWAIHLNGTYTQGKKAKYAQQYAI
                     LANTGYLSYDKSLTTYPYLSNSATVFDLVAHKKFGERAIVKVGVYNLFNKKYWTWDSL
                     RTIGITSPGVANSITGEGLNRYLAPERYVMASVEFKF"
BASE COUNT         5995 a         4229 c         4027 g         6317 t
ORIGIN      
        1 agcaataata tattgcttat agtaaaaaac caagttccta ggaactggtt tttatctgca
       61 attatttctc taaaaacaac cgcttgtatt agcctctact accaatacgg aaaatatttc
      121 gcattgtcgc aatttttgcc gacagccagc caataaacac acaaagcacc actaagaaga
      181 aggcttcgct gaaatctaat ccgttcagtt caaattgtac ggtaaacata tcagtcacat
      241 acttcactac accggtgaaa tagctaatcg ttaccgcact aaacagcacc gctaacaggc
      301 tgccaaacaa gccgtaaatc atacctgtgt ataaaaacgg acgggcaata aagtgatcag
      361 ttgcccctaa aatttgttgg acttcaatcg ctgctttgct attggcaaca tcggttcgca
      421 cactgtttcc aatcactaaa aaaactgcca acagcattaa taaggtacac accaccgcaa
      481 tacgagcaat cagccaagtt agagcagtta atttttccag ccagccgtta tctaaacgaa
      541 cctcctgcac ccctttaatt tgttgcaaac cgttgcgtag ctccaccatc gtatcagcat
      601 tattaaaatt tgctttcggt tttaaggtaa cgaccgcagg caacgggttt tcatctaaaa
      661 tatctaacgc ttcaccaaag cctgaccaag aacgaaattc gtctaaactt tgttggcgag
      721 aaatatagtt aaatgactca attttatccg tctcaaaagc acgaatgcga tcaacaacgg
      781 tattcacatc gtgttctgcc aaatttttgt gcagataaac ggttaattgt ggctcagggt
      841 aaaattgtgt tgctgcctcg tgggtattct tccaaagtaa ataactcacg gttggaatcg
      901 taagtgagac cgcaatcacc agcaccgtca gaaaagtgcc gagcttgcgt tgcattaaat
      961 cttgccaaac cgctcttaaa gagtagttgg tttgagcacc taatttacta aatgaacgaa
     1021 tcataatatt tccttaaaat ttaagatgcc cttgctccag cactaaacac ggctttggac
     1081 gctttgaaat aatattggta tcgtgggtgg caatcagcac cgttgtgccg gcttgattaa
     1141 attcctcaaa caaacggaaa atttcaaacg agagcttttc atctaagttt ccggttggct
     1201 catcggctaa taacagcgtt gggcgatgaa caatggccct ggcaatatcg acacgttgtt
     1261 gctcaccgcc ggaaaggtgc aacggcagat agttcgcttt atctgccaag ccaacacgct
     1321 caagggcaat gcgggcttca cgctccacaa tcgcttggtt cattcccaaa ataatcaatg
     1381 gtaatgcgac attatccaaa atggttcggt cggttaataa gcgataatct tgatgcacca
     1441 tcccgatttg gcggcgtaaa aacggcaatt catgatgagc aagtcgggta atatcgtgtc
     1501 cgttaaacaa aatttgcccg ccattggcac gctcaatccc cataattaat tttaatagcg
     1561 tgcttttccc cgcaccggaa tgcccggtaa tatatgccat tccaccggca ggtaggtgga
     1621 aatcaatgcc ctgtaaggct ggctttccgc ccttataaac cttgttcaca ttagtgaatt
     1681 taatcattct gttcgtcctc gtggctaaat aaggcttcaa taaattcttc tgcattaaac
     1741 gggcgtagat cttcaatttt ctcgcccacc ccaataaagc ggatcggaat attgaattga
     1801 tcggcaatcg caaaaatcac gccacctttt gccgtaccgt ctaatttagt taaggtgata
     1861 ccggttaaac ccactgcctc attaaacaat ttcgcttggc tgatcgcatt ttgcccagtg
     1921 ccggcatcaa gcgtaagcat aatttcgtgc ggtgcggttt catcatattt tttcatcacc
     1981 cgcacaattt tcttcaactc gtccatcagg ttatttttgt tttgcaaacg ccctgcagta
     2041 tcagcgatta gcacgtcaat cccttttgcc gcagcggatt gcatcgcatc aaaaatcacc
     2101 gaggcagaat ccgaaccggt gctttgtgcc accaccggaa tgttatttcg ctctccccaa
     2161 acctgtagct gttcaactgc cgccgctcgg aacgtgtctc ctgctgctaa cattaccgat
     2221 ttgccttctt gttggaattt acgggcaagt ttgccaatgg tagtggtttt ccccacgcca
     2281 ttcacaccaa ccattaaaat gacatacggt tttttcgctt ccaacactaa cggttgagcc
     2341 accggtttta gcacttcacc cagttccact ttcaactgtt gatacaacaa atctgcatct
     2401 tttaattgtt gcttggtagc atgttgcgtt aaattgttga tgattttttg tgtggtcggc
     2461 atacctaaat ccgccacaag caactgctct tccagctctt caaataactc atcatcaatt
     2521 ttcttgccac ggaagaaatt acggaagccc gaaccaatat tctgcttggt tttaatcaag
     2581 ccttgaatta aacgactgaa gaaaccgcct tgactcggtt tttcttgata ttcatcttgg
     2641 atagtagatt cttcaactgt gtcttgaaca ttatttacta attcagtttc agcaacttct
     2701 tcagccacag cctcttcgac ttgataagta acttgctctt gttcgttgag atctaactgc
     2761 tcagttgcaa tattttgaag attttcgacc gcttgttcgc ctttttgttc ttcaaatgtt
     2821 tgttcgattt tatcttcaac atcatcaaag aacgctttcg cctcttcaac tttttcttca
     2881 acaaactctt tgaaatcttc gactttttgt tcaatggtat cttctacttg ctcagcaaat
     2941 tgctcaattt tttcttcttt ttcctcaaaa tagtcttcta actgatctac cttttcttca
     3001 attttatctt ccagctcatc taatttttca gaaaacgact tctcagtttc cggttcaaca
     3061 ataacaggct gttccggttg aatactctct tgttcttgtt gaatctcttt ctgttcagct
     3121 tcttctttct taccaaatcc aagccaagac caaaaccctt ttttcttctc tgacatattt
     3181 ttctctcatt tctcgtaaaa atagactaaa cttacatagt ctatcaaaaa atcccttatt
     3241 ttcctttagt gagtatgaaa aaaaatcgaa attcccccca atctgttcag caaatgggcg
     3301 aagtacgggt tatcgccgga ctgtggcgag gcagaaaatt acctgtacta aatgccgagg
     3361 ggcttcgccc gacaaccgat agagtaaaag aaacgctgtt taactggtta atgcacgaca
     3421 ttgctcactc acgctgtctt gattgctttg caggcagtgg ctctctgggc attgaagccc
     3481 tttcccgcca agcacaagcg gtcgtttttt tggaaaaatt tgcaaatgct gccaaccagt
     3541 taaagaaaaa tctccaagca ttaaaatccg aacaaggtag cgttattcac actgacaccc
     3601 tcgcctattt agcacaaaaa aataacggtg agccatttaa catcgtattt atcgatccgc
     3661 cttttcatca agggtttgta cctcaagtgc taaacttgct ggcagaaaat aactggctcg
     3721 ccccgaatgc gattttgtat gtggaaaccg agaaaaatca cccgccatta gagctaccgc
     3781 aaggctggca aattttaaag gaaaaagcag ccggaatggt ggtaagccgt ctgattcagc
     3841 tataatcttt ttgtttttta taactaaaaa atataaaata aaacttatct atctaacatt
     3901 ttattaacac tcaaattaga ataacgaaat gaaaaaatta acccctgatg aagccattga
     3961 tattgcctac gatattttct tagaaatggc aggcgaaaat ttagatcctg ccgatatttt
     4021 actgttcaac ctccaatttg aagagcgtgg tgcagtggaa atggtcgaaa cttctgaaga
     4081 ctgggatcaa gaaatcggga ctttaattga ccctgatgcc tttgccgaag tttgggttgg
     4141 cttagtcaat gaacaagatg aaatggacga tgtattcgcc cgtttcttaa tttcccacga
     4201 tgaagaaaac cgtgaatatc acgttgtttg gaaagaaaaa taaaaaggag aaaaaatggc
     4261 taatatcgac actaatcaac caatagaagc ctcgcttaaa tttcgtgaag caatggctca
     4321 cttatcttct gcggtgagca ttgtgacaac caatggcgta gccggcaaag cagggctgac
     4381 ggtttcgtct gtttgttccg ttaccgattc cccaccaacg ctcttatttt gcattaataa
     4441 aaacagccac gttcacgata ttatccaaca aaacggcaaa gtatgcgtta atgtgttaag
     4501 ccacgaacaa gaagacttag caaaacattt tgccgccatt ttagaaagta caatggaaga
     4561 acgctttggt tgggatattt ggaacaacgg ctttgacgat cagcctgtgt tacgcagtgc
     4621 tatttctgct ttacaaggca atattgttga tacgcacgca gtgggtacgc atactatttt
     4681 tgtggtagaa gtgagccata ttgacgtaga gccgaaccac agtttagttt attttgcccg
     4741 ccaatttaga agcgtgaaca ttgactaaaa tatatttaac agaaatttga tcaaatccga
     4801 cttttttagt cggatttttt atttcctgtt tttaaaacag tgctaaaatt ttgccgttta
     4861 tgtttgactg acaaaaggaa acaaaatgga aaatttaatt tgctacaaac aaatgccggt
     4921 gtggacaaaa gcaaccttac cacaaatgtt ccaagaaaag cacaacacca aagtcggaac
     4981 ttgggcaaaa ctcaccattc tcaaaggttc tctcaaatat tatgaattaa ccgaagaggg
     5041 agaaattatc aaggaagata tttttgatgc aaaccaccaa cgcccaatgg ttgagcctca
     5101 actttggcat aaggttgaag ctctttctga cgatttagaa tgccagttgg ctttctattg
     5161 caagccggaa gattattttg ctaaaaaata taatctgacc gctacccatt cagaagtgct
     5221 aaatgccgtc aattatacca aaggtggcaa agcgttagat ttaggttgcg ggcgaggacg
     5281 caatgcactt tatctgaatt tactgggttt tgatgtcact gctgttgatc ataatcaaga
     5341 aagcattgat tttctcaact atatgatcga aaaagaacaa gctcaaaaca ttactaccgc
     5401 tgtttatgat attaacgagg caactatcgg ctcgcaaaac ggtgaatatg acctgattat
     5461 ttccactgtt gtaatgatgt tcttaaaccg tgaacgcatt cctgccatta ttgagaatat
     5521 gcagaaaaac actaaagtcg gcggttataa cttaatcgta tgtgcaatga gtaccgatga
     5581 ctacccttgc ccgatgccgt tctcctttac cttcaaagaa ggcgagctcg ccgattatta
     5641 tcaaggttgg gaattagtca aatataacga agatttagga catttacaca aaactgatga
     5701 aaacggcaac cgcattcaac tacgttttgc gacaatgttg gcgaaaaaaa tcagctaaac
     5761 ttaaccgctt gcagggggaa ttagcttccc cctaattcat caaatccatt ctatttattt
     5821 tcactttttc attccgcaaa cgtttgcttg tgctataatg gcttcgtttt ttagtcattt
     5881 actgttgagg ttaaagtgag caacacacaa ctaagttaca aagatgccgg cgttgatatt
     5941 cacgcaggaa acgagttagt cgaacgaatc aagcctgatg ttaaacgcac ccgtcgccct
     6001 gaagtaatgg gcggattagg tggttttggt gctttatgtg ctttaccgac aaaatataaa
     6061 gagccgattt tagtttccgg taccgatggc gtcggcacaa aattacgctt agccattgac
     6121 ttaaacaaac acgatactat cgggcaagat ttggtagcga tgtgtgtgaa tgaccttgtc
     6181 gtgcaaggtg ctgaaccgct tttcttctta gattattacg ccaccggtaa attagaggtt
     6241 gatgtagcca ccaatgtcgt caaaggcatt gcagacggtt gcgtgatttc aggttgtgct
     6301 ttagtgggag gtgaaacggc tgaaatgccg ggaatgtacc acgaaggcga ttacgattta
     6361 gccggattct gtgtcggtgt ggtagaaaaa tctaaaatca ttgacggttc aacggtgaaa
     6421 accggtgatg ccttaattgc attagcgtcc agtggcccgc attccaacgg ctattcgtta
     6481 attcgtaaag tattggaagt cagccgatcc aatcctgcaa ccgatttatt ggaagacaaa
     6541 cccttaagcg aacacttatt agccccaact aaaatttatg taaaatcaat cctaaaatta
     6601 gttgaagaag ttgatgttca cgctatcgct cacttaaccg gtggcggttt ctgggaaaat
     6661 attccacgcg tattgccgga atctgccaaa gcggtgattg atgaatcgag ctggcaatgg
     6721 ccggcgatat ttagctggtt acaggaaaaa ggcaatatca gccgttatga aatgtaccgt
     6781 actttcaact gcggtgtcgg aatggtgata gccttacctg agagagatgt cgaaaaagcc
     6841 cttactcttc ttaaagagag tggtgaaaat gcgtggctta tcggtaaaat tgaagactta
     6901 ggcaccggta gcgagcaagt tgaaatccgc taatttgcaa aataaatgct aaaattgacc
     6961 gcttgtagta actgatctgc aaacggttaa atttttattg aggaatgcaa atgcaactat
     7021 tttggcctat ctactttgtc ttaatgaacc tagctgcctt atatttaatg tatagtgaca
     7081 aacaaaaagc gatcaaaaaa gaatggcgag tgccagaaat tactctcctc tctttttgcc
     7141 tcttaggtgg ggctatcggt gtttacctag gtatgaaata ctttcgccat aaaacccaac
     7201 attggtattt ccacgtcgct gttgtgcttt ctacttttgc ttggctgatt ggcttgcctt
     7261 acttttattt agctttatca tcatattaat ttatcattac tttttttaat ccgaaagccc
     7321 aatttatatc ctagtccgct cacaaaaaat ttgatttaga tcgcattatt tgtctattaa
     7381 aatcgttatt atctaccaaa atcgattgtc atttatttta aggagatgaa tatgtcagat
     7441 gtgcgtattg aacacgattt acttggtgaa agagaagtac ctaatagtgc ttattggggc
     7501 attcatacat taagagcgat tgagaatttt aatatctcaa atgtcaccat ttctgatgta
     7561 cctgaatttg tgcgtggcat ggtaatggta aaaaaagcta ctgcgttggc aaatggtgaa
     7621 ttgggtgcaa tcccgaaaaa aattgccaaa gctattgtgg cagcctgtga tgaagtatta
     7681 gtgaaaggac gctgtctcga tcaattccct tcagatgttt atcaaggtgg agccggcaca
     7741 tcggtgaata tgaataccaa tgaagtgatt gccaaccttg cattagaaat tttgggcgag
     7801 gcaaaaggta aatatgatat tgtcaatcca atggatcacg ttaatgcaag ccaatccacc
     7861 aatgatgcct atccaaccgg tttccgcatc gcggtttata acagtatcac taaattaatc
     7921 aataaaatca cttacctaca aactgcattt gaaaataaag ccactgagtt ttccgatgta
     7981 ctaaaaatgg gaagaacgca gttacaagat gccgtgccaa tgacgctcgg tcaggaattt
     8041 aaagcttttg ccgtattatt agatgaagag gttcgtaacc ttaaacggac ggcagaattg
     8101 cttcttgaag tgaatttagg cgcaaccgct atcggtactg gtctgaatac gccagagggt
     8161 tactctactc ttgcagttaa atatttagcc gaagtcacgc aactgccttg ctcactgtct
     8221 gaaaatctca ttgaggcaac atctgactgt ggtgcttatg taatggttca cggtgcatta
     8281 aaacgcaccg ccgtcaaact ttctaaagtg tgtaatgact tacgattact ttcatcaggc
     8341 ccacgtgccg gcttaaatga aattaatctt ccggaattac aagccggctc atctattatg
     8401 ccggcaaaag taaaccctgt tgtacctgaa gtcgtaaacc aagtgtgctt taaagtgatt
     8461 ggtaacgaca ccaccgttac ttttgcagca gaggccggtc aattacagct taacgtaatg
     8521 gagccggtta tcgggcaagc aatgtttgaa tctatcgagc tgctttccaa tgcatgtatt
     8581 aatctacgtg ataaatgtat tgacggtatt accgctaacc gtgacatctg ccaaaactat
     8641 gtgttcagct ctattggtat tgtgacctac ctcaatccat ttatcggcca ccataatggt
     8701 gatattgtcg gcaaaatttg tgcaaccacc ggcaaaagtg tacgagaagt tgtgcttgag
     8761 cgaggcttac tcaccgaaga acaactcgat gatattctct cgattgagaa cttaatgaat
     8821 ccgacttata aagccaaacg ctttaccgaa gaggaataat cattgtttac aagcggtctg
     8881 attctggcaa aaaattgcaa atttttacca aaatcagacc gcttgttatc ccattatttc
     8941 ttatttgctt tcagcatcgc cattaaattt gcaatatttg cagaagattt tgcctctttt
     9001 tcctgttcgg tcattcttgg cttttcactt tcccactcca aatcatcttg tggcaattcc
     9061 agtaaaaacc ggctcggctc aggtttgatg atttcgccat attggcgacg ttctttacac
     9121 agtgaaaacg tgagcgtttg ttgggctcgg gtaatgccga cataagccaa acgccgctct
     9181 tcttctacat tgtcctcatc aaggctggtt tggtgtggca gaatcccctc ttccataccg
     9241 attaagaaaa cgtgcggaaa ttccaaccct ttcgaggcgt gaagagtcat tagttgaact
     9301 tgatcggctt catcgtcctc ttcgccacgt tcgagcatat ctcgcaaggt taaacggttt
     9361 accacttgca ccaaattcat cggaggctct atttcatcgc cctctaacat cgcttgcacc
     9421 cattcaaaca aggtctgcac attacggctt tgcatttccg ctacttttgg gttcgccgcc
     9481 atttcataca aataggcttc atactgaatt ttcgccaaca gatcttttac tgcttcaatc
     9541 ggatcggatc tatcggcttg atcggcaatt tccacaatcc agcgggcaaa atcctgtaag
     9601 gcttggtaag gctttggcgt gaggcgttgt atgagttcaa aatcaaaaat cgcctcaaac
     9661 aaactgacct gcttttcatt agcaagtatg cctaattttt ctagcgttgc cgccccaatt
     9721 tcccgtttcg gcgtattcac aatacgcaag aaagctgcat catcgtcttg attcactacc
     9781 aaccgcagat acgccatcat atctttgatt tccgctcgag caaaaaatga cgtaccaccc
     9841 gaaattttat acggaatgcg gttttgcatt agcaattttt ccaacaagcg ggattgatgg
     9901 ttgcctcgat acaaaattgc ataatctttg tatttggtct ttttcgagaa acgatgggca
     9961 atcagctcgc ccacaatgcg ttccgcttcg tgttcctcat tttttgcctc aatgacctgt
    10021 aatttttccc cttgccccag ttctgaaaac agccgcttgc taaacaagtg atcgttatta
    10081 tcaatcagaa tattggcaca atgcagaatc cgctggctgg aacggtaatt ttgctcaagt
    10141 ttaatcactt gcaaatcaaa atcttcccgt aaccgttgca tattttcagg cttcgcccca
    10201 cgccaagagt aaattgattg gtcatcatcg cccacgaccg taaagtttgg ctcgttgccg
    10261 acaatcagct taattaactc atattggctg gtgttggtgt cttgatattc atcaactaac
    10321 aaatagcgaa ttttctgttg ccaacgagat tttgcttcgg gaaattggcg gaacagcaac
    10381 accggcaaca taatcaaatc atcaaaatcc aacgcattat aagccttaag ttgattctgg
    10441 tagagctgat aaaaatgtga aaacactcgc tcacgttcat cacgcacacg agtaagtacc
    10501 ctttcaggcg aaagcaaatc gtttttccag ttagaaatag tggcaattaa ggctttcagc
    10561 agatccttat cttccgtcac attttcaggc aataaatgtt tcagcaaagc aatttgatcc
    10621 tgctcatcaa acaaggtcat acccgattta aaaccgagca atttatattc gcgttttaaa
    10681 atttcaaacc caagtgtgtg aaaagtcgaa atggttaaac ctttgctgtt ttctttgccg
    10741 atagaatgat ccacccgttc acgcatttcc cgagcagctt tgttggtaaa ggttactgct
    10801 gcaatctgct taggcgaata gccacaatgt gcaattaaat gtgcgatttt attaataatc
    10861 acccgagtct tacccgagcc ggcaccagcc agcacaaggc aagccccttt ggtatattct
    10921 actgcttgtt gttgttgaga attgagtttc attgaatcta ttcaaaagta attttgacaa
    10981 ctattttaac ggaaagaaaa caagcggtcg aattttcagg aaaatttgca aaaaactttg
    11041 aaaatccgac cgcttgttca tcagagaaaa atccccaaaa cgcaaatttt tcctttcaat
    11101 cttgcccctt tagctatatc attataagtt gattttttag gggcaaatgc ctgattttat
    11161 aactcctttt ctttttaatt taagggaaaa aaacagtaga tggaaaaagt agaacagaaa
    11221 gctatcattg agcttaaaaa tgtaacaaaa agctacggta gtaaaacgat tcttaaaaat
    11281 ttaaatttaa ccattaacga tggtgaattt ttaacaattt taggcccttc cggttgtggt
    11341 aaaacaactg cgttacgttt aattgccggt tttgaagatt taactgaagg ttcaattatt
    11401 cttgatgggc aagatgtttc taacgttccg gcggagcaac gcccggtaaa caccgtattc
    11461 caaagctatg cccttttccc acatatgacg atttttgaaa acgtggcttt cgggctgcgt
    11521 atgcaaaaag tgccaaatgc tgaaattgag ccacgtgtga tggaagcatt acgaatggtg
    11581 cgtttagaag accgcgctca acaaaaaccg gctcagcttt ccggtggtca gcaacaacgt
    11641 attgcaattg cccgtgcggt ggtaaataaa ccgaaagtat tgttgttaga cgaatcgctt
    11701 tctgcgttag attataaatt gcgtaaagag atgcaaaatg aattaaaagc attgcaacgt
    11761 caattaggca ttacctttat ttttgtgacc cacgatcagg aagaagcctt aaccatgtct
    11821 gatcgtatta tcgtaatgaa cgctggtaaa atcgctcaag acggtacacc acgtgagatt
    11881 tacgaagagc caagtaactt atttgtagct cgtttcatcg gcgaaattaa cgtttttgat
    11941 gcaactgtaa ttgagcgtgt tgatgcaact aatgtaaaag caaacgtaga aggtcgcatt
    12001 tgcaatatca aagtggaaga tttagaggtt cagccgaacc aaaaattaaa agtattgtta
    12061 cgccctgaag atattgtgat tgaggagtta gacgaaaacg aaagctcgaa agcaattatc
    12121 ggtcatatta tcgaccgtaa ctacaaaggt atgacattag agtctagcgt gagattagat
    12181 cataacggta tgaatgtatt ggttagcgag ttcttcaatg aagacgatcc gaacattgac
    12241 cacgaagtgg gacaaaaagt tgctcttact tggtatgaag gctgggaggt tgtgttaaac
    12301 gatgaaggcg aataacaaat tccaaaatgg tgcggtcgca actattttcg gttggttatt
    12361 acttttcgta ttagtgccga acgtactcgt tttaatcatc agcttcttaa cagaaaaccg
    12421 tcaaagtcag tattttgtgg actttgcatt tagttttgat gcttataaat cactgtttaa
    12481 tgacacctat gcagcagtat tgtggaactc gctatatatg gcgggcattg ccaccttttt
    12541 ctgtttgatc atcggctatc cctttgcatt ttttattgcc aaaatgccgg aaagaattcg
    12601 tccgttttta ctgtttttag tagttctacc gttttggact aactcactga ttcgtattta
    12661 tggcattaag attttcttag gcgtaaaagg ctttttaaat gaaagcttga tggctttagg
    12721 tataatcagc gagccaatgc gtttattaaa ctcagaaatt gcgattatta ttggtttagt
    12781 ttacattcta ttacctttta tgattctacc gctttattca tcaatcgaga aaattgataa
    12841 ccgcttacta gaagctgcaa aagacttagg tgcaaacgcc ttccagcgtt ttattaaagt
    12901 gactattcca ttaacaatgc cgggcattgt cgcaggttgt ttattagtat tacttccggc
    12961 aatgggtatg ttctatgtgg cagatttatt aggcggcggt aaaacaccgt tagtaggtaa
    13021 cattattaag agcttgttct taaataccaa ccaatttgca ttaggttcag cagtaagtat
    13081 tgcattaact atcttaatgg cattaatgct ttatgtttac tatcgtgcaa acaaattatt
    13141 aaataaaaag gtggagcttg aataatgaaa aagatgttta gaaacctttt tatgttggtt
    13201 gtttttgcat atctctatat tccaattatc attttagtga tcaactcctt taatgaagac
    13261 cgctttggat taaattggaa aggctttact tggaattggt atgagcgttt attcagtaat
    13321 gatacgcttg tacaagcaac attgaactca ttaactattg cgttctttgc ggcaacattc
    13381 tcaaccattt taggggcatt aacctctatt gcgctttacc gttaccgttt ccgtggtaaa
    13441 aagctagtgg gcggaatgtt attcgtggta atgatgtcgc ctgatatcgt aatggcggta
    13501 tctatgctcg tattatttat gatcttaggt atcaagctag gctttatttc gctattaatt
    13561 gcacacatta ctttctgttt gccttatgtg gtaattgcaa tttcctcacg cctcagcgat
    13621 tttgacggca aaatgctaga agctgcaaaa gacctaggtg caagtgaagt gactattttg
    13681 cgtaaaatta ttttaccact ggcattacct tcgattattt caggctggtt gttaagcttt
    13741 acgatttcgt tagatgacgt tattgtttca tctttcgtga caagcccaag ctacgaagtt
    13801 ttaccactga aaattttctc attggttaaa acaggtgtaa cacctgaagt gaatgcacta
    13861 gcaactatta tgattatttt ctcattaaca ttagtggtat taagccagtt agtagtgaag
    13921 aaaaaagtct aaaaatcact aaaaatcgta tacataaatc agcactttaa agagtattaa
    13981 agtgccgatt tttttacaaa aataagctaa aaaaacaacc gcttaagaat aatgaattct
    14041 tataaaaata gccataacta atcaatatct ttacaaagcc gttaatttac gctattaatt
    14101 gcctaccaat ataactaaaa agagtggtgc ttatgctgaa gtttattttt aaacgtcttc
    14161 ttgaggcgat tccaacccta ctaattctga ttaccttttc ctttttcctg atgcggcttg
    14221 ccccgggtag cccatttacc agtgagaaag cctatccgcc gaaagtaatg gcaaatatcg
    14281 aggcaaaata tcacctgaat gaaccgctgt ataagcagta ttttctttat atggaaaatc
    14341 tgtcaaaagg cgatttcggt ccatctttta aatataaaga tcaatcggta aataatctga
    14401 ttgcttctgc gtttcctgtt tcgataaaac tgggcattac tgcctttatt tttgcggtgc
    14461 ttatcggttt aaccgcagga actatcgctg cacttaagca aaatagtaaa tgggattatt
    14521 tagtgatggg cttttcaatg acgggtatta ttatgccgag ctttgtcttt gctccgctgt
    14581 tggtactcat gtttgcgatt tatctcaaat ggttgcctgc cggtggttgg aacggtggtc
    14641 agctctacta tatggtttta cctgttctct ctttaaccat tagctatgtt gccggcattg
    14701 cccgtattac tcgtggttca atgattgagg tgttgcactc taattttatt cgcaccgcta
    14761 aggcaaaagg cttgccaatg cgtaaaatta ttttcaaaca cgctttgcgt ccggcattgt
    14821 tgcctgtgat cacttattta ggcccggctt ttgttggcat tattaccggc tcgatggtaa
    14881 ttgaaagcgt gtttggctta ccgggaatcg ggcagttgtt cgtaaacgga gcattaaatc
    14941 gtgactattc attagtatta agcctaacca ttttggtagg tacgctcacc attttattta
    15001 atgcgattgt tgatatttta tatgcggtca tcgacccgaa aattcgttat tcataggagt
    15061 aaagcggaaa atgcaaaatt cttcaaaaaa tcaaccgctt gttgaggtta cctcaaccat
    15121 tcaaggacga agtttatggc aagatgcacg ccgccgtttt ttccgaaata aggcggctgt
    15181 ggcaagtttg attattcttt gttgtattat tctttttatt acctttgccc caatgctaat
    15241 gccgtttagc tatgaagata ccgattggaa tatgatgggg attgctccgg attttgaatc
    15301 tcaacactat ttcggtactg attcttcagg gcgtgatttg ctggttcgag ttgcaatcgg
    15361 tggacgcatt tcgttaatgg tagggattgc cggtgcatta attgcggtgc ttatcggtac
    15421 aatctatgga gcaatttccg gttatttcgg cggtaaagtc gatatggtga tgatgcgttt
    15481 tctggaaatt ttaagctcat tcccatttat gttcttcgta attttgctgg ttacgttctt
    15541 cgggcagaat attttcctga ttttcattgc aatcggtatg gtagcgtggc tgaaccttgc
    15601 ccgtattgta cgtggtcaaa ctctttcgct taaaaataaa gagtttgtgg aagcagcgat
    15661 tgtgtgtggc gtttcccgcc gtcaaattat ttggcgacac attgtgccta acgttttagg
    15721 cttagtggtg gtttatgcct cccttgaagt accatctctg attttgtttg aatcgttctt
    15781 aagtttctta gggcttggta cacaagagcc gatgagcagt tggggggcat tattaagcga
    15841 cggagcggca caaatggaaa cctcgccttg gctactggct ttccctgcct ttttcttatg
    15901 tttaacactg ttttgtttta attttattgg tgatggcttg cgtgatgccc tcgatccaaa
    15961 agataaatag aggtttagaa tggaattatt agcagtaaat aatctcgatg tttatttaaa
    16021 aacggacgaa gaattagttc acgcagtgcg taatgtctcg ttctcgattg aaaaagggca
    16081 aacccttgcg attgtggggg aatcgggttc gggtaaatcc gttacttcaa tggcaattat
    16141 gcagttattg cctaaaaata tcgtctcatt cggtgaacgc tcaagcatca tttttgaaga
    16201 acaaaacttg cttactctat ctgaaaaagc aatgcaaaca gttcgaggtg atcgcatcgg
    16261 tatgattttc caagagccaa tgacctcact caatccttat atgccgattg gcaagcaggt
    16321 tgctgagacg gttcaaaccc ataatccgca aatcagcaat gccgaagcgg aaaaaatggt
    16381 gttggaaact ttgcaaaaag taaaaattcc cgatgcggaa aagaaaatga tttgctatcc
    16441 gcacgagttt tccggcggtc agctacaacg aattatgatt gcaatggcaa ttatcaacaa
    16501 acccgattta ttgattgccg atgagccgac caccgccctg gatgtcacaa cccaagcgga
    16561 aattttggat ttaatgcacg acttacagcg tgatatggga atggcgatta tcttaatttc
    16621 ccacgattta cgcttggtgc ataaatacag tgacttagtc tgcgtaatgc aaaacggcga
    16681 aattattgag cgaggcgaaa cggaaactgt gttcaccaat ccgcaacatc cttatacggt
    16741 ggagctactt accccgattc caactaattt aaaaggggaa ttaccgccaa atgcaccaac
    16801 cttgcttcag ggtgagcata ttaaggtaga ttatatttta aaacgctcgc tattcggtaa
    16861 gccgaaaaag gtgtttaatg cgttaaaaga tatttcattg cacttgaaaa ccggcgaaac
    16921 gctcggcatt gtaggcgaat ccggctccgg gaaatctacc cttgggcgtg ccattatgca
    16981 gattttagat tatcgcggca atattacatt tgcaggtaag acactggcta atctgaataa
    17041 agccgaacgt caagccctga aaaaagatat gcaaatggtg ttccaagacc cgttcaactc
    17101 actttctcct cgcttaacag ttggggaaat tattgctgag ggcttaaccg tacattgccc
    17161 tcaaatgagc aaaaccgaac ggcgggaaaa agtaatgaaa atgttggaag aggttaatct
    17221 caaccctgca atgattaacc gctatccgca cgaattttcg ggcggacaac gccagcggat
    17281 tgcgattgca agggcaatca ttttagagcc gaaatttgta ttgcttgatg agccaacctc
    17341 agcacttgac cgctctactc agatcactgt aattgaattg cttaaccgct tacagaaaaa
    17401 atacggctta agttatattt tcatcagcca cgatttggcg gtcatcaagg cacttagcga
    17461 ccgagtgatt gtaatgagcc aaggtgagat tgtagaaagc ggtgatgtca ctcaaatttt
    17521 tgaaaatcca caacaagaat acaccaagcg gttgatttta gcctctaatt tgtaacccct
    17581 tccacaaggt cttattctac caaaaaacaa gaccttgtca ttttatgcta gcaaaacatt
    17641 gtaattttga tattttattt caattttttg aaaaaatatg gaactttata taaaactcac
    17701 tttctaaaca atacgttatc tgaactaaga taacgcttat ttaaaggaaa atatatgaaa
    17761 aaattgatga tattcgcaac aactgccatg attgtaagca atttagccca tgcagcaggt
    17821 gaacaaagtg atgcaagaga agcccacgaa agcaccgtaa aaacctcaac tgttaagtat
    17881 agctgccaaa acggcaaaaa attaagcgtg aaatacggct tcaataaaca aggcattcca
    17941 acctatgctg aggcaaaatt aagcggtaaa aaacgtttta tgccgatcaa cctatacacg
    18001 acagatgcaa ccggcactaa ctttggtgac gaaaacaatt tcagccttta cggtgatcca
    18061 atggaattta ccaaccaccg taaagcatca gtaaatatcc aaagccccgc aagtgaaatt
    18121 ttatataaag gttgcacacc tcaaaaatag ataaaaagta aaatgagtcc gctctgataa
    18181 gtggcttttt aatagctgtt tattgcagat aggaaagcat tttgttttta tctactatcc
    18241 agaaacaagc ggttaaattt gtttaatttt ttacaaaaaa tgggccaaaa ttaaccgctt
    18301 gtttattact ataaagaaat aagtacgtaa aaattaactc ttacatttaa tgcttatctc
    18361 taaaatttaa actccactga tgccattaca tagcgctctg gagcaaggta acgatttaag
    18421 ccttcgccag ttatactgtt ggcaactcca ggactagtta taccaatagt tcttaaacta
    18481 tcccaagtcc aatatttttt attaaagaga ttataaaccc caactttaac aatcgctctt
    18541 tctccaaact ttttgtgtgc aactaagtca aatacggtgg ctgaattact taagtatggg
    18601 taagtggtta atgatttatc gtaacttaaa tacccagtat tggctaaaat agcatactgt
    18661 tgtgcatatt ttgctttttt gccttgtgtg tatgtgccgt ttaggtgtat cgcccagtca
    18721 ttgttcacag ctcgataacc tatgccgaac aatgctttta acggttgaac cgtgagtaag
    18781 tcggtaccat cattacgttt gccacgagca taaccaaatc caccattaag ctcaaagcct
    18841 tgtggaattg cattccacgc tgtgtttaag tctaaagttc cgttaatatc aacacctttg
    18901 attttagctc ggttaacatt ttgcgattgg taaatattgt taccaatagt ggcaagatca
    18961 atcagatttc tatagtgggt atggtaagcg gctacgctca agctacctaa tgaaccatta
    19021 cctaccagtg aaatttcatt acctaagctt gtttccggtt ttaagttagt atttgctaag
    19081 aaagtttggc ttgctccacg cccttgaact tcacggttaa agaacatttc acttgcggta
    19141 ggtgttctaa aaccacggct gagtttatag ccaatttgcc atacaggaga gagctgataa
    19201 tttaaaccaa tatctcccgc ccaattgtta aaggttttat ctgacaaact attatcatca
    19261 gaatgtaatt tctgactgct caatcgagca tttaaatgag cagatagatt ttgtgtcagt
    19321 aaaatagagt ctcccatcaa aatatggaaa gacttggttt ttgccggaga ctgcatattt
    19381 tgatcggttg gcgtaatacc tgctgtatag gtttgcatat caaaactgaa atcagataca
    19441 ccatagccta attccgttga caatttatgt tcggtattac ctagatcaac aggcttgaat
    19501 gtaacaccta agctaccttc aacattttta gtattaaaag cccgtttggt attatctgtt
    19561 tttgtaccac gggcaatagt gatttgatcg ttaatacctg aaatttcagt atcctgtttg
    19621 gttaccgcaa ctttaatatt ttcaagaata ctgttttttg gagtgtataa ataagtaacg
    19681 ccataagttt caatttcctg cacatccaaa aaatcacgta atgtgacggt agaataagaa
    19741 agctcttgac cggcgttttt actgcgttgc ttagaagttt ttaattcaag gcgattttca
    19801 tcattccatt ttagccctaa ttttgccaag tagctgtatt gattattttt gtaaggattt
    19861 ggtaaaccac gaccacttcc cataatatcc ggacctttag acgttgtttg tgtttcgtgt
    19921 ccttgacggt ggctatacat aaccaaagca tccgcatatt gaccatccgc agcaatacct
    19981 gccgtctcaa tattctcttt attttgaccg ttataggtat atttcaacat cccaccaaat
    20041 tggcgacctt tcattaaaat atcacttacg gttttagttt tatagttcac agagccgcct
    20101 aatgccccat tgcctacttt tgtgcttgag cctttttcaa tggttacatc gctcattaat
    20161 tcagtatcga tttcagggcg agatttattg tagtaactat agcgactaaa ggtggcatag
    20221 ttatttgatg ctgcttgcga tatgccatca actgttactg ccacttgatt accttcaaca
    20281 ccacggatat taaacccttg tgggccaaag cggcctgttt gcggaacgcc catatcagta
    20341 ctataacgta ctaaatcttc attgctcatc accgcttgct gtttaagtag gttctcctgc
    20401 tgctcattta cttcaatagt atctagttca atgctactaa tctttgtttc ttgagctaag
    20461 gagagttgag aaataaaggg agtaatcgct attgctaata cagtttgctt tatttgcata
    20521 ttttagatcc tctagttagt ttaatccgtt taatgttaac actatatc
//
LOCUS       DANLXO010000040        20380 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.040, whole genome shotgun sequence.
ACCESSION   DANLXO010000040 DANLXO010000000
VERSION     DANLXO010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20380
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.040"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..231
                     /locus_tag="PXD69_001217"
     CDS             <1..231
                     /locus_tag="PXD69_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283424.1"
                     /translation="ASPLLKLDTERNINLYFQAIHKCTPDKIHTKIINIPSEGNAKEL
                     WTATGCNKTQSFIITYRNDGVGGTFINMTTTP"
     gene            248..1819
                     /gene="guaA"
                     /locus_tag="PXD69_001218"
     CDS             248..1819
                     /gene="guaA"
                     /locus_tag="PXD69_001218"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDL6283425.1"
                     /translation="MTNIHHHKILILDFGSQYTQLIARRVREIGVYCELWAWDVTEEQ
                     IREFNPTGIILSGGPESTTEENSPRAPEYVFNAGLPVLGICYGMQTMAMQLGGLTETS
                     DHREFGYASVALKSADQLFANLNDDLTACEPKLDVWMSHGDKVTKLPPHFTITGVTPT
                     CPIAAMSDESRRFYGVQFHPEVTHTKQGLALLKNFVVGICGCETNWTAENIIEDAVKR
                     IREQVGDDEVILGLSGGVDSSVTALLLHRAIGKNLHCVFVDNGLLRLNEGDQVMEMFG
                     NKFGLNIVRVNAEDRFLEALKGLDEPEAKRKTIGKVFVDVFDDESKKLSSVKWLAQGT
                     IYPDVIESAASKTGKAHVIKSHHNVGGLPDYMKLGLVEPLRELFKDEVRKIGLALGLP
                     AEMLNRHPFPGPGLGVRVLGEIKKEYCDLLRKADAIFIEELHKAGWYYKVSQAFTVFL
                     PVKSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDLLGKISNRIINEVNGISRV
                     VYDVSGKPPATIEWE"
     gene            complement(1980..2375)
                     /locus_tag="PXD69_001219"
     CDS             complement(1980..2375)
                     /locus_tag="PXD69_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcB family protein"
                     /protein_id="HDL6283426.1"
                     /translation="MEQWTTDVWAAIMAAFIVGAVIGCTLVRVFNSSVRKQHELEKEL
                     KQTKTQVDEQKQKLEQHFEQSAQLLSSLASDYKKLYTHLAQSSEKLLPEASKNITFFQ
                     QTKLPIPAEKTEEDQPRDYSEGSSGLLKS"
     gene            2674..3102
                     /gene="rplM"
                     /locus_tag="PXD69_001220"
     CDS             2674..3102
                     /gene="rplM"
                     /locus_tag="PXD69_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDL6283427.1"
                     /translation="MKTFVAKPETVQRDWYVVDATGKTLGRLATELARRLRGKHKPEY
                     TPHVDTGDYIIVINADKVAVTGKKQTDKIYYWHTGYVGGIKDATFKEMIARRPEAVIE
                     IAVKGMLPKGPLGREMFRKLKVYAGSEHNHQAQQPQVLDI"
     gene            3119..3514
                     /gene="rpsI"
                     /locus_tag="PXD69_001221"
     CDS             3119..3514
                     /gene="rpsI"
                     /locus_tag="PXD69_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDL6283428.1"
                     /translation="MTAANQNYGTGRRKSSSARVFIKPGSGNITINQRSLEVYFGRET
                     ARMIVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAA
                     GFVTRDARRVERKKVGLHKARRRPQYSKR"
     gene            5196..6916
                     /gene="ltrA"
                     /locus_tag="PXD69_001222"
                     /pseudo
     CDS             5196..6916
                     /gene="ltrA"
                     /locus_tag="PXD69_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341372.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            7105..7881
                     /gene="yaaA"
                     /locus_tag="PXD69_001223"
     CDS             7105..7881
                     /gene="yaaA"
                     /locus_tag="PXD69_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDL6283429.1"
                     /translation="MLAIISPAKTLDFKTNIDGFAFSQPNLTACSQELIDICKQLSPA
                     ELGSLMSISDKLAALNVARFAEWQLEHNEQNAKAALFAFKGDVYTGLEAETLSKAQVE
                     YAQQHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNIITENLQQAID
                     EQGDDILVNLASDEYYGAVKPQNLNATIIKPVFLDEKNGKYKVISFYAKKARGMMVRF
                     ILDTQPTSIEQLKQFNYGGYWFDADSSSESELVFKREEQA"
     gene            7881..8444
                     /locus_tag="PXD69_001224"
     CDS             7881..8444
                     /locus_tag="PXD69_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATPase"
                     /protein_id="HDL6283430.1"
                     /translation="MSAIKKGITLVALSLAGCVSQSPQFAVPDAIHFGQDTFVKVTHS
                     QIDEMQHLLYLPEKSEKNPENWQKGILFFLDKNSKNQTLEQRAAFRQASFAKKPELEA
                     KVEIQQNELHSSVIYPPIERFNNVMLEVTRGRNLACGYGQIQFADKREVGKTVAKKSP
                     NLTAYSQEIARLSLELNQLGWQVQCSK"
     gene            8453..9358
                     /locus_tag="PXD69_001225"
     CDS             8453..9358
                     /locus_tag="PXD69_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HDL6283431.1"
                     /translation="MNEKYSKLVKNAANLAIIVAILLIVIKAFAWWKTGSISILAAMT
                     DSVVDLFASLTNILVLRFALQPADENHAFGHGKAESLAALAQSAFISGSAVFLLLQGF
                     HKLTNPELIAQSSIGVIVSIVSIVITALLVFYQRYVVTLTKSPAIEADSLHYQTDLLM
                     NAAILVAMLLNSAGFVYADAVFAIGIALYIAFNAVKMFWCAVQTLLDQALPDEEIERI
                     KEIASQHPNILGIHDILTRRAGAVRFIQLHLELDDHLTLLVAHEITDSLEQKLLAAFP
                     MSHVIIHQEPTTVVKQEFQDMAENI"
     gene            9358..10110
                     /locus_tag="PXD69_001226"
     CDS             9358..10110
                     /locus_tag="PXD69_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon-containing protein"
                     /protein_id="HDL6283432.1"
                     /translation="MYQAIVHFSYHNFEQDPVTAISQILNQWLYNGQVIGREMPITFH
                     QNEFQARVCVPTQESLLPQYNSDEVNEALQQAVEIGVIFASFELVGRDYQGEESSHNR
                     SPAFQILYTTHLDTCSPLYDGEQFAPIPLYSLQDQSLSEAILEWQQNWQACDLLQMNG
                     NLLECHALVQISDETSDLAMIGRDLCQQIEQKTHIPTFYYLYRLGRDESEYQRKCPCC
                     GGEWKLTEPLHDIFHFRCEPCRLISNLSWELL"
     gene            10211..11536
                     /locus_tag="PXD69_001227"
     CDS             10211..11536
                     /locus_tag="PXD69_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDL6283433.1"
                     /translation="MLIFNLIVFAAILFLLAKIYKSTQKLGQTVFIGLFLGLASGAFL
                     QTFYEKATVDATLDWINLIGNGYVRLLQMIVMPLVFVSILSAITRLKEAGSLGKISFS
                     VLSVLLVTTAIAAAIGIALVYLFDLSAEGLVAGSRELAAQEKVVGRVEQVSNLSVPSM
                     LLSFIPKNPFLELTGANPTSIINTVIFSALLGIAALSLGKEDKALGERIAQGVETLNK
                     LVMRLVRFVIRLTPYGVFALMIKMAATSQWSDIVNLGSFIVASYIAIGLMFIVHGILL
                     FVAKINPLDYYKKVLPTLSFAFTSRSSAATIPLNIETQTNKLGNNSVIANFSATFGAT
                     IGQNGCAGIYPAMLAVMVAPTVGMDPFSLNYILTLILVVAISSFGIAGVGGGATFAAI
                     VVLSTLNLPIELVGLLISVEPIIDMARTALNVNGAMVAGTLTNKWVKAE"
     gene            complement(11596..12255)
                     /locus_tag="PXD69_001228"
     CDS             complement(11596..12255)
                     /locus_tag="PXD69_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL6283434.1"
                     /translation="MFNISKQQVLDAFHFRSACRSYDPNKKINKEDMDYILELGRLSP
                     SSVGSEPWKFLVLQNPETRQKIAPVSWGIKHPMEEMSHLVVILTKKNVRYDSVYMRDM
                     LAKRGLTYEQIEASLVRYKSFQEEDMKLLSERELFDWSTKQTYIALGNMMTGAALIGI
                     DSCPIEGFHYDTVNQILSDEGLFDLNEYGVSCMITFGYRNKEIKKKSRKPTEEVIAWI
                     E"
     gene            12484..13470
                     /gene="pheS"
                     /locus_tag="PXD69_001229"
     CDS             12484..13470
                     /gene="pheS"
                     /locus_tag="PXD69_001229"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDL6283435.1"
                     /translation="MQHLKDLTNKAREALDKIDQNLEALEEFRVEYFGKKGHFTTLMQ
                     ELRNIAAEERPAIGAKINEAKQVVLDVLNAKKEEWEQAVLNAKLANESIDVSLPGRKT
                     ELGGLHPVSITIERVVKFFSELGFTVANGPEIETDYYNFDALNIPDHHPARADHDTFW
                     FDANRLLRTQTSGVQIRTMENVKPPIRIVAPGRVYRNDYDQTHTPMFHQIELLYVDKE
                     ANFTELKGLIHDFLKAFFEEDLQVRFRPSFFPFTEPSAEVDVMRQNGKWLEVLGCGMV
                     HPNVLRNVGIDPEEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLKQFK"
     gene            13518..15905
                     /gene="pheT"
                     /locus_tag="PXD69_001230"
     CDS             13518..15905
                     /gene="pheT"
                     /locus_tag="PXD69_001230"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDL6283436.1"
                     /translation="MKFNESWLREWVNPAISTEQLCDQITMLGLEVDDVEPVAGAFSG
                     VVVGEVVECAQHPDADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAVLPGD
                     FKIKKTKLRGQPSEGMLCSYSELGIKEDHSGIIELPADAPIGQDFREYLNLNDVAIEI
                     SLTPNRADCLSIAGIAREVGVINRVDVKAPTITDVKATISDKVSVELQAPEACPRYLA
                     RVVKNVNVKATSPLWLQEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGGI
                     QVRMAKEGEELVLLDGTNAKLQSNTLVIADSKGALAMAGIFGGEASGVSENTKDVVLE
                     SAFFAPLAITGRARQYGLHTDASHRFERGVDPELTRQAMERATALLLEICGGEAGEIV
                     EAVSQENLPKRNTVTLRRSKLDSVIGHHIDDATVTDILTRLGLNVTFADNSWTAIAPS
                     WRFDIEIEEDLIEEIARIYGYNSIPNNSPLAHLTMKGTPEKLLEANRIRMALVDSDYQ
                     EVITYSFVDPKKQSLLHPQQEALILPNPISSEMSAMRVSLLTGLLDTIVYNQSRQQNR
                     VRIFEAGLRFIPDSNAESGVRQEFVFGAAIVGDKRPVHWENKSEAADFFDLKGDIERI
                     LSLTSIRHDLQFVAKQFPALHPGQSAAIMLDGKEIGFIGTVHPSIVQKFGIKGKPIVC
                     EILASAIAERPVTQAGEISKFPANNRDIAVVVDESVPAGEVLEACRKAGGNKLVAVNL
                     FDVYRGSNLESGKKSLAISLTVQDNEKTLEENEINAVIQAVLAELATRFNAVLRD"
     gene            15963..16259
                     /locus_tag="PXD69_001231"
     CDS             15963..16259
                     /locus_tag="PXD69_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HDL6283437.1"
                     /translation="MALTKIEIAENLIEKFGLEKRVAKQFVELFFEEIRSSLENGEEV
                     KLSGFGNFSLREKKARPGRNPKTGENVAVSARRVVVFKAGQKLRERVEQASSQS"
     gene            16298..16819
                     /locus_tag="PXD69_001232"
     CDS             16298..16819
                     /locus_tag="PXD69_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6283438.1"
                     /translation="MKLTKRWLSLGCLLAITAMLVACSSSDTTSKSQVKSKVYRSIYQ
                     SDLSDPIMAISRLSEHQHEWKGTRYRLGGNSKAGIDCSGFMQVTFKDLFGIDLPRTTT
                     EQAKAGERISKDELRTGDLVFFKTGRGPNGKHVGVYVKNGQFLHASTKGGVIYSDLDS
                     PYWSKAFWQARRL"
     gene            16835..17878
                     /gene="degS"
                     /locus_tag="PXD69_001233"
     CDS             16835..17878
                     /gene="degS"
                     /locus_tag="PXD69_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HDL6283439.1"
                     /translation="MLKKIGQAVIFGLFCAILILFVAPIIQSKGSSFSLSAFTQKEIV
                     SYNAAVKIASPAVVNVYSRNFSSENETFEVKNLGSGVIMSSDGYILTNRHVIEDADQI
                     VIALQNGAISTNVKLVGDDSLTDLAVLKIEGENLPTIPQNPERKLQIGDVVLAIGNPL
                     NLGQSITQGIVSAIGRKTLTESGRQNFIQTDVSINQGNSGGALINTAGELIGINTLRF
                     GKNTNELSEGLNFAIPINLANQIMSKIIKDGRVIRGYFGVSTDLLDTAKMQGYEKGVI
                     IVNVDKNGPAAKAGIQAGDLVLKVGDIEAFSPSQMMEELAEMKPYTTVKVLVQRDEQL
                     LNFDVTITELQTQ"
     gene            17887..18561
                     /gene="cmk"
                     /locus_tag="PXD69_001234"
     CDS             17887..18561
                     /gene="cmk"
                     /locus_tag="PXD69_001234"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDL6283440.1"
                     /translation="MKKIVITVDGPSGAGKGTLCHALAEKLGFDFLDSGALYRITALS
                     AIKKEVPLDDEEKLAEVGRNLDIQFLPENGEIQVILEGENVGDLIRTAEAGQNASKVA
                     AFPLVREALLERQRAFSSEKGLIADGRDMGTVVFPDAQIKLFLDASAEERTKRRVKQL
                     QEKGFNANFDEILAEIKERDFRDRNRSVAPLVPAKDALLLDSTHLSIEDVINQALNHI
                     AQYIKF"
     gene            18653..20320
                     /gene="rpsA"
                     /locus_tag="PXD69_001235"
     CDS             18653..20320
                     /gene="rpsA"
                     /locus_tag="PXD69_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDL6283441.1"
                     /translation="MSELSFAQLLEESFAATPRLGDVVKGTVVAIQKGLVIVDTGFKS
                     ESAIDASEFTNAQGELEVQVGDEVDVVLKAVEDGFGATVVSRGDAKRNEAWIALEKAF
                     EEQATVIGFVNGKVKGGFTVELNGVRAFLPGSLVDTRPVRDSLNLEGKEYEFKVIKLD
                     QKRNNVVVSRRAVIETESNQDRDAVLANLVEGSEVKGTVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEVVNVGDEVTVKVLKFDKDKTRVSLGLKQLGQDPWAVIAENHPV
                     NSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLE
                     VDEERRRISLGLKQCKANPWEQFAATHSKNDKVSGKIKSITDFGIFIGLEGGIDGLVH
                     LSDISWNVSGEEAVRNYKKGDEVEAVVLQVDAVKERISLGIKQLESDPFTNFVDGTKK
                     GAILTGKVVEVDAKGVKVELEGGVEAFIRANEATAERVEDITSVISVGDSIEAKYTGV
                     DRKSRVVNLSVRAKNEAEESAAIAQVNKEEVVVPNAFAEAFKAAKGE"
BASE COUNT         6240 a         3645 c         4632 g         5863 t
ORIGIN      
        1 gccagtcctt tattaaagtt ggacacagaa agaaatataa atctgtattt tcaagcaata
       61 cataaatgta ctcctgataa aattcataca aaaatcatca atattccaag tgaaggtaat
      121 gcaaaagaac tttggactgc aacaggttgt aataaaacgc aatcttttat tattacatat
      181 agaaacgatg gggtaggcgg cacttttatt aacatgacca caacgccata atttaaagga
      241 aattacaatg acaaacatcc accaccacaa aattttaatt ttagacttcg gttcacaata
      301 tactcagctt atcgcacgcc gtgtgcggga gattggggtt tactgcgagc tttgggcttg
      361 ggacgtaacg gaagagcaga tccgtgaatt taacccaacg gggattattc tttcaggagg
      421 tcctgaaagc accactgagg aaaacagccc acgagcgccg gagtatgtgt ttaacgctgg
      481 tctgccagtg ctgggcattt gctacggaat gcagacaatg gcgatgcagt tgggcggttt
      541 aaccgaaacg tccgaccacc gtgaatttgg ctatgcctcg gtggctctca aatctgccga
      601 tcaacttttt gcaaatttaa acgatgattt gaccgcttgc gagccaaaat tggacgtgtg
      661 gatgagtcac ggcgacaaag tcaccaaatt accaccgcac tttaccatca caggcgttac
      721 cccaacctgc ccgattgccg cgatgtcgga cgaaagccgc cgtttctatg gcgtgcagtt
      781 ccaccccgaa gtgacccaca ccaaacaagg cttggcgttg ctgaaaaact tcgtggtcgg
      841 catttgcggc tgtgaaacga actggacggc agaaaacatc attgaagatg cggtgaaacg
      901 cattcgtgag caagtgggcg atgacgaggt gattttaggt ttgtcgggcg gggtggattc
      961 ctccgtcacc gccttgctat tacatcgtgc tatcggtaaa aacctgcact gcgtatttgt
     1021 ggataacggc ttgctccgct tgaacgaagg cgatcaagtc atggaaatgt tcggcaacaa
     1081 attcggtttg aacattgtgc gagtgaatgc cgaagaccgt ttcttagaag cgttaaaagg
     1141 cttagacgaa ccggaagcta aacgcaaaac cattggtaaa gtgtttgtgg acgtgtttga
     1201 tgacgaaagc aaaaaactta gctcggtcaa atggcttgca caaggcacga tctaccctga
     1261 tgtgattgaa tccgccgcca gcaaaaccgg caaagcccac gtgattaaat cacaccataa
     1321 cgttggcggc ttgccggatt atatgaagct cggcttagtc gaaccgttgc gtgaattgtt
     1381 taaagacgaa gtgcgcaaaa tcggcttggc actcggctta ccggctgaaa tgctcaaccg
     1441 ccacccgttc cccggcccgg gcttaggcgt gcgtgtgctg ggcgaaatca aaaaagagta
     1501 ctgcgattta ctgcgtaaag ccgatgcgat cttcatcgaa gaactgcaca aagccggctg
     1561 gtactacaaa gtcagccaag ctttcacggt attcttgccg gtgaaatcgg tgggcgtaat
     1621 gggcgatgga cgcaaatatg actgggtcgt cagcctgcgt gcggtggaaa ccatcgactt
     1681 tatgaccgct cactgggcgc acttgccgta tgatctatta ggcaaaatct ccaaccgcat
     1741 tattaacgaa gtgaacggta tttcccgtgt ggtgtatgac gtgagcggaa aaccaccggc
     1801 aaccattgag tgggaataac tcttacaaaa taggcttctt ataacctaag ttcagtatct
     1861 aaagctgaaa aatgttgtta actgcttaat gtagcggttt agaataaagg attgattcca
     1921 acggaatcaa tccttaaact aagtgccttt tagtaaaact aaatattcaa tttttagttt
     1981 tatgatttca gtaagccaga tgaaccttcg gaataatctc taggttgatc ttcttccgtt
     2041 ttttctgccg gaataggtaa tttggtttgt tggaaaaagg taatattttt tgatgcttct
     2101 ggtaatagct tttcagagct ttgtgctaaa tgggtataaa gctttttata atcagaagct
     2161 agacttgaaa gtaattgggc tgattgctca aagtgttgtt caagtttttg tttttgctca
     2221 tccacttgag ttttggtttg cttcaactct ttttccagtt catgctgttt tctgacacta
     2281 ctgttaaata ctctaactag agtgcaacct attacagcac ctacaataaa tgctgccata
     2341 atggctgccc aaacatctgt tgtccattgt tccatcataa actccttatg ttttagtgat
     2401 tgattactgc tatttttaac atttcagttt ttatttgaaa agctccaaat gattaaaatg
     2461 tgatataggt tcaattttga aagattatca gcaaaaaatg ttagattttt gagtgaaatc
     2521 tctgtataat ttcgccaccc tgtttttgtg tggttttccc cgccacacaa gtttggtctg
     2581 aatcagactc gaaggggtcg ggttcaccgt aaaataatag gaaatacctc aatgaggtat
     2641 tgggttttaa actttaaatt tggtatttaa ttaatgaaaa cttttgtagc aaaaccagaa
     2701 acagtacaac gtgactggta tgtagtagat gcgacgggta aaacattagg tcgtttagcg
     2761 actgaattgg cacgccgtct tcgtggtaaa cataaacctg agtacactcc acacgttgat
     2821 accggtgatt acatcatcgt gatcaatgca gacaaagtag cagtaacagg taaaaaacaa
     2881 actgacaaaa tctactactg gcacactggc tatgtaggtg gcatcaaaga tgcaaccttc
     2941 aaagaaatga ttgctcgtcg tcctgaagct gtgattgaaa tcgcagtgaa aggtatgtta
     3001 ccaaaaggtc cacttggtcg tgaaatgttc cgtaaattaa aagtttacgc aggttcagaa
     3061 cacaatcacc aagcacaaca accacaagtt ttagatatct aattcacgga gcataaaaat
     3121 gacagcagca aatcaaaact acggcacagg tcgccgcaaa agctcttcag cccgtgtatt
     3181 tatcaaaccg ggttcaggta acattactat caaccaacgt tcacttgaag tttacttcgg
     3241 tcgtgaaaca gctcgtatga tcgtacgtca gccgttagaa ttggttgaat taactgataa
     3301 attagacctt tacatcactg ttaaaggtgg tggtatttct ggtcaagcgg gtgcaatccg
     3361 tcacggtatc actcgtgcat taatggaata cgatgaaacg ctacgcccag cacttcgtgc
     3421 agcaggcttc gttactcgtg acgcacgtcg cgttgaacgt aaaaaagtgg gtttacacaa
     3481 agcacgtcgt cgtccacaat actcaaaacg ttaagtgcga caagttgtcg tacttatggc
     3541 aataactcct tatatatcaa ggagttattg ctggaagtgg gtggtattct tatcacctgc
     3601 ttccgacttt ccaagcactc ttcggagtgc ttggaaagac aggcaagaga aaaggggctt
     3661 tgcccaagca ctcttgttct aagttgggaa agtaaatgaa ccaactcgaa aggctgtaag
     3721 gtatgatctt cactttgatg tacttggttt ttttcttaat accaagatag agtaagaaag
     3781 caagatccgc agaccggagt tacccatacc ccagagcaga gaaaatttac aacacctact
     3841 ataaataaag tccaatagat cgcctcagca ctcagaaaag acatcagaac taagacttgg
     3901 taaatcttag ggaaggagtg ccatctttac ttatactttt cacactcgca atctacggta
     3961 atcgtagaat gctcctcaat agtgaataaa aacactaagg ataaactctt gtttattcgt
     4021 ttttatgagc tagggataat tataccttaa attctcgtta aaatcacctc taatactcac
     4081 attagctagg gttagctacc ttcgcctatt ggacaggtta taggctattt gcgggaaaat
     4141 ttggatatag acaaagcgac tttagtcgca taagtgaatt tattttgtaa aggttcggac
     4201 ttatttatgc agtataggat actgacttag taagtatgcg taagctatta ctgtcattgt
     4261 tacggtcaaa caatccgaag atatgagtag tacggaggga atgataaggt aacctgttat
     4321 atggctaaca gtagtctagg gatagtgcga caccggtaac ggtgtggtgc ggagcttcct
     4381 gacaatgaac ccctgatgaa aatcagtcaa tgaaatcgtg agaggacatt gggagaaagt
     4441 gaatagcaca ccttcaaggg gctagactgg gtagaaagat aaacgtaagt gaacagttga
     4501 taaacctcgt tatcgagaga gagccaaagc tattgatagg ctctgaccaa aaggtaggca
     4561 gtcggttatt cttctttaac gtgaggatac gccatcaaag cactgtcggg ggagagactg
     4621 tatcttcact actcgtgtga tagtaatgga acttggtaag cctgtatttc tgccttgccc
     4681 acaatactca aaccgtttga aatagatggc gaaggtaaaa gaggaaaagg caagtaaagc
     4741 gtaagcgata ctgttgggaa tgcaggtaag ggaggttaga aaaagcgaat gctatgctgt
     4801 aatggcatag atagggtgtg aaacatagcc taacccgaaa gggtgcagac ttctaactgg
     4861 tctttcatcg taagatgaat agcgtttcct ttaagggtaa caccgaaaga gattgtagat
     4921 aacagaagag aaattgaatg ttatcaagga atacaatgtt gaataggtac aaaaacaaat
     4981 taaagaaatg agcgttaggc tcatcataac ctagcgctcg actctttaac ccaatcggtt
     5041 acaagagcgg ttgaaattat cggtaaaacg gtaagatcct cttgtaacca aagggaataa
     5101 actaaggata gtttatctca atagggattt gtttacttga aggatctacc cacttgctga
     5161 gactttcgac ttatcttgta atatcagagg taggtatgaa agagcgtaag cattatactg
     5221 aaaagttagc ttgcaatcca gcgacctcgc acatctccaa atggcattat gtcgattggc
     5281 ataaagctga aacgtatgtg aaaggaatgc aaattcggat tgcgaaggca acactggaag
     5341 gcaattggcg taaggttaaa aacttacaac gaatgctaac ccactcacat tatgctaaat
     5401 tagttgcagt aagaagagtg actgaaaatc aaggtaagcg aacaagtggt gtcgataaag
     5461 agctttggga gaccccagag acaaaatggc aagccgcact atcattgacg gaaaaagggt
     5521 ataaacctag tccattaaga cgagtgtata tccccaaacc gaatggaaag aaacgtccgt
     5581 tgggtattcc aacaatgcga gatagagcaa tgcaagccct ttatttattg gcaatacaac
     5641 ctgtggcaga aacaactgcg gataaaggtt cttatggatt tagattaaac cgttcaacgg
     5701 tagatgctat tactcatata cactaaattt attcgcataa aggcaagaaa actaatcaac
     5761 ctgttgagtg ggtacttgat gcggatattg caggttgttt tgaccacata agccacgact
     5821 ggctattaaa gcatattcca atgaataaac ggatattgcg gaaatggcta aaatcaggtg
     5881 tagtggaatt tggacggttg aaacgaacag aggaaggtac accacagggt gggattatct
     5941 cgccaacgct tgcaaatatg gcattagatg gattggaaaa actgttagaa actcattttg
     6001 gaggaaaagg cagtcggaca attcgagaaa ataaaactta cttagtacgt tatgcagatg
     6061 actttatcat atcaggtaaa acgaaagagt tacttgaaaa tcaagttatc ccacttatcc
     6121 agaactttct gaatgaacga ggtttatcct tatcaacaga aaagacgaaa gtggtacata
     6181 ttgaagaagg ttttgatttt ctaggttgga atgtgagacg tttcaaagga aaaatactga
     6241 acagaccaag tcaaaagaat gtgaaagcgt tctacaacaa ggtaaaagag gtaatttcta
     6301 aatgaaaatg gctaaacagg aagatcttat aatggtgcta aacccaatgt tacgaggttg
     6361 ggcaaattat catcgaagcc aagttgcaag taaggcattc ggacgaatgg acgcattagt
     6421 ttggaaagta ctttggaaat ggtgtgaacg ccgtcatcac aataaaggta ttatgtggat
     6481 aaaagagaaa tacttttgta ccacagcgac tcgaaattgg gtatttggca cagtttatac
     6541 caatgaaaaa ggagaaacta agccgataga cttattctat tgtggctatg ttaaaatcaa
     6601 acgacacgtt aaaattaagt ctgaatataa tccgtttttg cctgaatggg agttgtacgg
     6661 cgaaaaactg agccaagaac gtctgtatga agaacaatca cacagacgac aatggcaggc
     6721 actgtataaa gaccagcgtg gaaaatgtgc attatgtggg ttgccaataa ccaaagaaac
     6781 aggctggcac gatcatcata tcgtgtacaa aatgttagga ggaagcgatg cattaagcaa
     6841 tcgttgtttg gtacatccga cttgtcacat aaagattcat actttgaact tggaggtcgt
     6901 gaagccggct atatagctga tgaaaggctt gagctgtatg cagagaaatt tgcttgtaca
     6961 gttcttaggg ggcggaggtg cagtaatgta ctttcgctac ccgacttttc ttttcgtttt
     7021 caagaaggca gggtttcctg ccttttttgt ctttatgact gtggtagaat aaccgccctg
     7081 attaactatt tgatagaggc atttatgtta gccattattt cccctgccaa aacccttgat
     7141 tttaaaacca atattgacgg ttttgcattt tctcaaccaa atttgaccgc ttgtagccaa
     7201 gaattaattg atatttgtaa acagctttca cctgctgaat taggtagttt gatgtcaatt
     7261 agcgataaat tagccgcttt aaatgtggct cgctttgccg agtggcagct tgagcataac
     7321 gaacaaaatg ccaaagccgc cctctttgcc tttaaaggtg atgtttatac cggactagag
     7381 gcagaaacgt taagcaaagc acaagttgaa tatgctcaac aacatttgcg tatgctttca
     7441 ggcttgtatg gtttattaaa gccgttagat ttaatgcagc cttatcgttt agaaatgggc
     7501 actaagttag ccaatccgaa aggcaaagat ctttatgctt tctggggcaa tattattact
     7561 gaaaatttgc agcaagcgat tgatgaacaa ggcgatgata ttttagttaa tcttgcctct
     7621 gatgaatatt atggtgcggt taagccacaa aatctaaatg cgactattat caagccggtg
     7681 tttttagatg agaaaaacgg taaatataaa gtgatcagct tctatgccaa aaaagcccgt
     7741 ggaatgatgg ttcgctttat attagacacc caaccgacta gcatcgaaca gctcaaacag
     7801 tttaactacg ggggctattg gtttgatgca gacagttcta gtgaaagcga gctagtcttt
     7861 aaacgtgagg agcaggcata atgtcggcta tcaaaaaggg aataactttg gttgcgttat
     7921 cattggcagg ttgtgtcagc caaagcccac aatttgcagt gcctgatgct attcactttg
     7981 ggcaggatac ttttgtaaaa gtcacccaca gccaaattga tgaaatgcaa catttacttt
     8041 atttgccaga aaagagtgag aaaaatccgg aaaattggca aaaaggcatt ttatttttct
     8101 tagataaaaa cagtaaaaat caaaccttag agcaacgagc tgcattccgc caagcaagtt
     8161 ttgcgaaaaa gccggagctt gaggcgaaag tggaaattca gcaaaatgaa ttacacagca
     8221 gtgtgattta tccacctata gaacgtttta acaatgtgat gttagaagta acccgtgggc
     8281 ggaatttagc ttgtggttac gggcagattc aatttgcaga taagcgggaa gttggcaaga
     8341 cagttgcaaa aaaatcgccg aatttgaccg cttacagcca agaaattgct agactttctc
     8401 ttgaattaaa ccaactgggt tggcaagtcc aatgcagtaa ataatgtagt aaatgaacga
     8461 aaaatacagc aaattagtca aaaatgcagc gaatttagcg attattgttg cgatcttact
     8521 gattgtgatt aaagcctttg catggtggaa aaccggttcg atttcaatct tggcagcaat
     8581 gacggattcg gtagtggatc tgtttgcttc gctaaccaat attttagtgc tgcgttttgc
     8641 actacaaccg gcagatgaga atcacgcgtt tgggcacggc aaagcggagt ctttggcggc
     8701 acttgcccaa agtgcgttta tttccggctc ggcggttttc ctactgctac aaggtttcca
     8761 taaactcacc aatccggaat taattgctca atcgagtatt ggggtaattg tcagtattgt
     8821 atcaattgtg attactgcac ttttagtctt ttatcagcgt tatgttgtca cgcttacgaa
     8881 aagtccggcg attgaagcgg attcgttaca ttaccaaact gatttattaa tgaatgcggc
     8941 aattttagtg gcaatgttgc ttaatagtgc cggttttgtg tacgccgatg cagtttttgc
     9001 aataggtatt gccctctaca ttgctttcaa tgcagtaaaa atgttttggt gtgcggtgca
     9061 aaccttgcta gaccaagctt tgcccgatga agaaattgag cggattaaag agattgcttc
     9121 gcaacatccg aacattttag ggattcacga tattctaacc cgccgtgcag gtgcagtgcg
     9181 ttttatccaa ttacatttgg aattagacga tcacttaacg ctgctagtag ctcacgaaat
     9241 aactgatagc cttgagcaga aattgctggc ggcatttccg atgtctcacg tgattattca
     9301 tcaagagccg actacggtgg tcaaacaaga atttcaagat atggcggaga atatttaatg
     9361 tatcaggcga tagtgcattt cagctatcat aattttgagc aagatccggt gacggcaatt
     9421 agccaaatct taaatcaatg gttatataac gggcaagtca ttggcagaga aatgccgatt
     9481 acttttcatc aaaacgagtt tcaagctcgg gtttgtgtgc ctacacaaga aagccttttg
     9541 ccacaatata atagtgatga agtaaatgaa gcgttgcaac aagcggtcga aatcggcgta
     9601 atttttgcaa gttttgagct tgtcgggcga gattatcagg gcgaagaaag cagtcataac
     9661 cgctcgccag cgtttcaaat attatatacc acccatttag atacctgctc gccactttat
     9721 gatggagagc agtttgcccc aattccgctt tattctttac aggatcagtc tcttagcgaa
     9781 gcgatattgg aatggcagca aaattggcaa gcgtgcgatc tgctacaaat gaacggcaat
     9841 ctgctggagt gccacgcact tgttcaaatt agtgatgaaa caagcgatct tgcaatgatc
     9901 ggtcgagatc tatgtcagca aattgagcag aaaactcaca ttcccacctt ttattacctc
     9961 taccgtttag ggcgtgatga aagtgaatat caacgcaaat gcccttgttg tggcggagaa
    10021 tggaaattaa ctgagccgtt gcacgatatt ttccatttta gatgtgagcc ttgccgtttg
    10081 atctctaatc taagctggga attattataa cttttagtta taccaaagta ataaatcatc
    10141 ttgaatgaat gccgcaagcg taataccctt gcggcatttt tataataagc ggttttactt
    10201 tggaggttct gtgcttattt tcaacttaat tgtctttgcg gcaatattat ttttattggc
    10261 taaaatttat aaatctacgc aaaaactcgg tcaaacagtg tttattgggt tatttttagg
    10321 gcttgcaagc ggtgcttttt tgcaaacttt ttacgaaaaa gctactgttg atgcaactct
    10381 tgattggatt aacttaattg gtaacggtta tgttcgcttg ctacaaatga tcgtaatgcc
    10441 attggtgttt gtctctattt tatcggcaat tacccgctta aaagaggcag gatctttagg
    10501 caaaattagt tttagtgtgc tatcagtgtt attagtgacc accgcgattg ccgcagcgat
    10561 tggtattgct ttagtgtatc tgtttgattt atctgccgag ggtttagtcg ccggctcccg
    10621 tgagcttgcc gctcaagaga aagtggtagg gcgtgtggag caggtgagca acttatctgt
    10681 gccttcaatg ttgctttctt tcattccgaa aaatccgttt ttagaattaa ccggtgcaaa
    10741 cccaacgtcg atcatcaaca cggttatttt ctcggctctg ctaggcattg ctgcactgag
    10801 cttaggcaaa gaagataaag cgttgggcga acgtatcgca caaggtgtag agaccttaaa
    10861 taaactggtt atgcgtttag tacgttttgt gattcgccta accccttatg gcgtatttgc
    10921 gttgatgatc aaaatggcgg caacttctca atggagcgat attgtaaatt taggtagctt
    10981 tattgtggca tcatacattg cgattggttt gatgtttatt gtgcacggta ttttactctt
    11041 tgtggctaaa atcaacccgt tggattacta caaaaaagtg ttgccgacat taagttttgc
    11101 ttttacgtct cgttccagtg cggcaaccat tccgttgaat attgagacgc aaaccaataa
    11161 attaggtaat aacagtgtga ttgccaactt ttctgcaacc tttggggcaa ccatcgggca
    11221 aaatggctgt gcgggaattt atccggcaat gttggcggtg atggtcgctc caacagtggg
    11281 aatggatccg tttagcttaa actatatttt aaccttgatt ttggtggtgg caatttcctc
    11341 atttggcatt gccggtgtag gtggtggtgc aacttttgcg gcgattgtgg tgctatcaac
    11401 cttgaatctg ccgattgagt tagtaggctt gctcatttca gttgagccga ttattgatat
    11461 ggctcgcacc gccttaaacg tgaatggtgc aatggtggcg ggcacattaa ccaataaatg
    11521 ggtgaaagcc gagtagtcaa aactaaagat ataaaaatgg gcgattaatt cgcccgtttt
    11581 tataagttaa ggtgattatt caatccacgc aatcacttct tcggtaggtt tgcgggattt
    11641 tttcttaatt tctttgttgc gatagccaaa agttatcata caagacacac catattcgtt
    11701 taggtcaaat aagccttcgt ccgataaaat ttggtttacg gtatcgtaat gaaaaccttc
    11761 aatcgggcaa gagtcaatac caatcagagc cgcaccggtc atcatattgc ctaatgcaat
    11821 ataggtttgc ttggtactcc aatcgaataa ttcacgttca ctaagcaatt tcatatcctc
    11881 ttcttggaac gacttatagc gtaccagcga ggcttcaatc tgctcatagg ttaagcctcg
    11941 tttggctaac atatcacgca tatagacaga atcataacgg acattctttt tggttaaaat
    12001 caccactaaa tggctcattt cttccattgg gtgtttaatt ccccacgaaa ccggggcgat
    12061 tttctgacgg gtttccgggt tttgtagcac taaaaatttc cacggttcag aaccgacaga
    12121 gcttggtgag agacgcccga gttccaaaat ataatccata tcttctttgt tgattttttt
    12181 gtttggatcg taactgcgac aggccgaacg gaagtgaaaa gcgtctaaaa cttgctgttt
    12241 gctaatatta aacatcgttt ttccttttat aagtgaaata agtagattaa tgataacttg
    12301 atttagagca gaatgcgaat ttcacgcctg ttaatttgca aaaaattagg aaaaaatgac
    12361 cgcttgttta aaattgcttt accttaaaaa tcaatcattt aacgaatcgg ttgatttact
    12421 ttttctggct aaagtattat tattcatgaa attttttatt tcattgagtt tagaggatag
    12481 gtaatgcaac acctaaaaga tttaactaat aaagcacgtg aagctttaga taagattgat
    12541 caaaatttag aggctttaga agagtttaga gtcgaatatt ttggtaaaaa agggcatttt
    12601 acaacgttaa tgcaagaatt acgcaatatt gcagcggaag aaagaccggc aatcggagca
    12661 aaaattaatg aagcaaagca agttgtgctt gatgtgttaa atgccaaaaa agaagaatgg
    12721 gaacaagctg tattaaatgc aaaattagct aatgagagca ttgatgtttc actgccgggg
    12781 cgtaaaactg aattaggtgg tttgcaccct gtttctatca ctattgagcg tgtggtgaaa
    12841 tttttctctg aattaggttt taccgtagca aacggacctg aaattgaaac cgattactat
    12901 aacttcgatg cgttaaacat tccggatcat catccggctc gagcggatca cgatacgttt
    12961 tggtttgatg ccaatcgttt attaagaacc caaacctcgg gtgtgcaaat ccgtacaatg
    13021 gaaaatgtaa aaccgcctat ccgtattgtg gcaccggggc gtgtatatcg taatgactac
    13081 gaccaaaccc acacaccgat gtttcaccaa atcgaattgt tatatgtgga taaagaagca
    13141 aactttaccg agttaaaagg cttaattcac gattttctca aagcattctt tgaagaagat
    13201 ttacaagtgc gtttccgccc gtcattcttc ccattcactg agccttctgc agaagtagat
    13261 gtaatgcgtc aaaacggcaa atggttagaa gtgttaggtt gcggtatggt acacccgaat
    13321 gtgttacgca atgtagggat tgaccctgaa gaatatagcg gttttgctgt gggaatgggc
    13381 gtcgagcgtt taacgatgtt acgctacaat gtcacggatt tacgttcatt ctttgaaaat
    13441 gacttacgtt tcttaaaaca atttaagtaa tacaagcggt taaaaattta gaaaatttta
    13501 caaataggat agaaataatg aaattcaatg aatcttggtt gcgtgaatgg gtaaacccag
    13561 caattagcac agaacagtta tgcgaccaaa ttacaatgtt agggttagaa gttgacgatg
    13621 tagagccggt agctggtgcg ttttcgggtg tagttgtggg tgaagtggtg gaatgcgccc
    13681 agcacccgga tgctgacaaa ttgcgtgtca ctaaagtgaa tgttggtggc gaacgtttat
    13741 tagatattgt ttgtggtgca ccaaactgcc gtcaaggttt aaaagtggct tgcgctgttg
    13801 aaggtgcagt gctaccgggc gatttcaaaa ttaagaaaac caaattgcgt ggtcagcctt
    13861 cagaggggat gttatgttct tactcagaac ttgggattaa agaagatcat agcggtatta
    13921 ttgaattacc tgctgatgca cctattggtc aagatttccg tgaatattta aatttaaatg
    13981 atgtggcgat tgaaatcagc cttacgccaa accgtgccga ctgcttaagc attgccggca
    14041 ttgctcgtga agtgggggtg attaaccgtg tcgatgtgaa agctccaact attacagatg
    14101 taaaagccac gatttcagat aaagtttcag tggaattaca agcaccggag gcttgccctc
    14161 gctatttagc ccgtgtggtg aaaaatgtga atgtcaaagc gacatcgcca ctttggttac
    14221 aagaaaaatt acgccgttgt gggattcgct caatcgatcc aatcgttgat attactaact
    14281 tgagcctttt agaattaggg cagccaatgc acgcctttga tgcagcgaaa attgaaggtg
    14341 gcattcaagt gcgtatggca aaagaaggcg aagaattggt attgctagat ggcacaaacg
    14401 ctaaattaca atcgaatacc ttagtgattg ctgatagcaa aggggcattg gctatggcag
    14461 gtattttcgg tggcgaagcc agcggggtga gcgagaatac gaaagatgtg gtgttagagt
    14521 ctgcattttt tgctccatta gcgattaccg gtcgcgctcg tcaatatggg ttacataccg
    14581 acgcatcaca ccgttttgag cgtggggttg atccagaatt aactcgtcaa gcaatggagc
    14641 gtgcaacggc attattactg gaaatttgcg gcggtgaagc aggtgaaatt gtggaagccg
    14701 tgagccaaga aaacctacca aaacgcaata ctgtcacgct tagacgcagt aaattagatt
    14761 cggtgattgg tcatcatatt gacgatgcaa cggtaaccga tattttaacc cgcttaggct
    14821 tgaacgtaac atttgcggat aatagttgga cggcaattgc tccaagttgg cgttttgata
    14881 ttgaaattga agaagattta attgaagaaa tcgcgcgaat ttatggctac aacagtatcc
    14941 caaataattc gccacttgct catttaacga tgaaaggtac gccggaaaaa ttactggaag
    15001 caaaccgtat tcgtatggca ttggtagata gtgattacca agaagtgatt acttatagct
    15061 ttgttgatcc gaaaaaacaa tcattattgc acccacagca agaagccttg attttaccaa
    15121 acccgatttc aagtgaaatg tcggcaatgc gtgtttctct tttaaccggt ttgttggaca
    15181 ctatcgtgta taaccaaagc cgtcagcaaa accgtgtgcg tatttttgaa gcaggtctac
    15241 gttttattcc ggatagcaat gcggaatcag gcgtgcgtca agaatttgtt tttggtgcgg
    15301 cgattgtagg cgataaacgt ccggtacatt gggaaaacaa atcagaagca gccgatttct
    15361 ttgatttaaa aggcgatatt gagcgtattc tttctttaac ctctatccgc cacgatctgc
    15421 aatttgtcgc aaaacagttc ccagcattac acccggggca atcggctgcg attatgcttg
    15481 atggcaaaga aattggtttt atcggaactg ttcacccgtc aattgtgcaa aagtttggca
    15541 ttaaaggcaa accgattgta tgtgaaattc tagcatcagc tattgcagag cgtccggtta
    15601 cacaagcggg cgaaatttct aaatttcctg caaataaccg tgatattgcg gtagtggttg
    15661 atgaatctgt tcctgcaggt gaggtgttag aggcttgtcg taaagctggt ggtaataaat
    15721 tagtggcagt aaatttattt gacgtttacc gtggttcgaa tttagaaagt ggtaagaaga
    15781 gtttagccat tagcttaacg gttcaagata atgaaaaaac attagaagaa aatgaaatca
    15841 atgcggtaat tcaagcggta ttagctgaat tagcaacacg tttcaatgcg gtacttcgtg
    15901 attaatcagt aaaatatggc tgatttattt tatcagccat aacaataaac taaggataaa
    15961 tgatggcgct taccaagatt gaaattgcag aaaacctgat tgaaaaattt gggttagaaa
    16021 agcgtgtagc gaagcaattt gttgaattgt tctttgaaga gatccgatcc tccctcgaaa
    16081 atggtgaaga agtgaaatta tctggttttg gtaatttttc actgagagaa aaaaaagctc
    16141 gtccaggaag aaatcctaaa acgggggaaa atgtggctgt ttcagcccgt cgagtagtag
    16201 tttttaaagc tgggcaaaaa ttacgagaac gtgttgagca agctagctcc caatcatagg
    16261 ggcagttata ttagttagat ttaatgtgga gtaataaatg aaattaacca aacggtggct
    16321 ttccttaggt tgtttgttag ctattacagc gatgttagtg gcttgttcaa gttcagatac
    16381 aacctctaag tctcaagtaa aaagtaaagt ttatcgttca atataccaat cagacctttc
    16441 tgatcctatt atggcaatta gtcgattaag tgaacatcaa cacgaatgga aaggcactcg
    16501 ctatcgttta ggtggcaata gcaaggctgg catcgactgt tctggtttta tgcaagtcac
    16561 ttttaaagat ctttttggga tagatttgcc gagaaccacc acagagcagg ctaaggctgg
    16621 tgagcgtata tccaaagacg aattgcgtac aggtgattta gtttttttca agacagggcg
    16681 tggtccaaat gggaaacacg ttggtgttta tgtaaaaaat gggcaatttc ttcacgcctc
    16741 aacaaaggga ggggtgattt attctgattt ggattcgcca tattggtcta aggctttctg
    16801 gcaggctcgt cgtttataat ttagggtaac atacatgctg aaaaaaatcg gacaagcggt
    16861 catatttgga cttttttgtg caattttaat tttgtttgta gctccaatta ttcagagtaa
    16921 agggagttcg ttttcattat cagcattcac tcaaaaagag attgtaagct acaatgcagc
    16981 ggttaaaata gcctcccccg cagtcgttaa cgtatatagc cgaaatttta gttctgaaaa
    17041 tgaaacattt gaagttaaga atttaggttc gggtgtgatt atgagtagcg atggctatat
    17101 tttaactaac aggcatgtga ttgaagatgc ggatcaaatc gtgattgctt tgcaaaacgg
    17161 tgctatttcg actaatgtaa aattagtcgg cgatgattct ttaactgatt tagctgtttt
    17221 aaaaattgag ggtgagaatt tacctactat tccacaaaat ccggagcgca aactacaaat
    17281 tggcgatgtg gtgttggcaa ttggtaatcc tttgaattta ggacagagca ttacgcaagg
    17341 gatagtcagt gctattgggc gaaaaacctt aacagaaagt ggtagacaaa attttattca
    17401 gacagatgtt tccattaatc aagggaactc aggtggtgct ttaattaata ctgctggtga
    17461 gctaataggt attaacactt tgcgttttgg gaaaaatacg aatgaattgt cagagggcct
    17521 aaattttgcg attcccatta atctggcgaa tcaaattatg agtaagatca ttaaagatgg
    17581 ccgagttatt cgtggctatt ttggggtaag tacagatttg cttgacaccg caaaaatgca
    17641 aggttatgaa aaaggggtga tcattgttaa tgtagataaa aatgggccag ccgcaaaagc
    17701 ggggattcaa gcaggtgact tagtgcttaa agtcggagat attgaggcat tctctccttc
    17761 tcaaatgatg gaagagcttg ctgaaatgaa accttatact acagtaaaag tattggttca
    17821 acgtgatgaa caattactta actttgatgt aactattact gagttacaga ctcaataggg
    17881 tagaaaatga aaaaaatagt gattacagtt gatgggccga gtggtgcagg taaaggaacg
    17941 ttatgtcatg cattggctga aaaattaggg tttgattttt tagattctgg agccttatac
    18001 cggattactg cattaagcgc aattaaaaaa gaggttcccc ttgatgatga ggaaaaacta
    18061 gcggaagttg ggcgtaatct tgatattcaa tttttgccag aaaatggcga gattcaggtg
    18121 attttggaag gagaaaatgt aggcgactta atccgaacgg cagaagcagg tcaaaatgcc
    18181 tctaaagtcg ctgctttccc tttggtacgt gaagcacttt tagaacgcca aagagccttt
    18241 agtagcgaaa aaggtctgat tgcagatgga cgagatatgg ggacagttgt gtttcctgat
    18301 gcacaaatta agctgttttt agatgcaagt gccgaagaac gcacaaaaag acgtgtaaaa
    18361 cagttgcaag aaaagggatt taatgctaac tttgacgaga ttttagccga gataaaagaa
    18421 cgtgattttc gcgatagaaa tcgatcagtc gcgccacttg ttccggctaa agatgcgttg
    18481 ctgttagatt caacgcattt atcaattgaa gatgtgatta accaagcatt aaatcatatc
    18541 gctcaataca ttaaatttta gtttgttgct tcacatagga tttgtgtagc ttttattatc
    18601 aaccccgttt aacaggacgt tagatggatg tttattttta agaagattta ttatgtcaga
    18661 attatcgttt gctcaactac ttgaagaatc atttgcagct acaccacgtt taggtgatgt
    18721 tgttaaaggt actgttgttg ctatccaaaa aggcttagtt attgttgata caggtttcaa
    18781 atctgaatct gcaatcgatg cctcagaatt tactaacgca caaggtgaat tagaagttca
    18841 agtgggtgat gaagtagatg ttgttcttaa agctgtagaa gacggttttg gtgcaacagt
    18901 agtttctcgt ggtgatgcaa aacgtaacga agcttggatt gctttagaga aagcatttga
    18961 agaacaagct acagttatcg gtttcgtaaa tggtaaagta aaaggcggtt tcactgttga
    19021 attaaacggt gttcgtgcat tcttacctgg ttcattagtt gatactcgtc cggttcgtga
    19081 ttctttaaac ctagaaggta aagagtacga attcaaagta atcaaattag atcaaaaacg
    19141 taacaacgta gtagtatctc gtcgtgctgt tatcgaaaca gaaagcaacc aagatcgtga
    19201 tgcggtatta gcaaacttag ttgaaggttc tgaagttaaa ggtacagtta aaaacttaac
    19261 tgactacggt gcattcgtag atttaggtgg cgttgacggt ttattacata tcacagatat
    19321 ggcttggaaa cgtgttaaac acccaagtga agtggttaat gtaggcgatg aagttactgt
    19381 taaagtatta aaatttgaca aagacaaaac tcgtgtatca ttaggcttaa aacaattagg
    19441 tcaagatcct tgggctgtaa ttgctgaaaa ccacccggta aacagcaaat taactggtaa
    19501 agtaactaac ttaactgact acggttgctt cgttgagatt ttagacggtg ttgaaggttt
    19561 agttcacgtt tcagaaatgg attggacaaa caaaaacatt cacccatcta aagtggttaa
    19621 cgtaggcgat gtagttgaag taatggtact tgaagttgat gaagaacgtc gtcgtatctc
    19681 attaggttta aaacaatgca aagcaaaccc ttgggaacaa tttgcggcaa ctcacagcaa
    19741 aaatgataaa gtatcaggta aaatcaaatc aattactgac ttcggtattt tcatcggttt
    19801 agaaggtggt attgacggtt tagttcactt atctgacatt tcttggaatg tttcaggtga
    19861 agaagcagtt cgtaactaca aaaaaggtga tgaagtagaa gctgttgttc tacaagttga
    19921 tgcagtgaaa gagcgtatct ctttaggtat caaacaatta gaatctgatc ctttcacaaa
    19981 ctttgtagat ggtactaaaa aaggtgcaat cttaacaggt aaagttgtag aagttgatgc
    20041 taaaggcgtt aaagttgaat tggaaggtgg cgttgaagca tttattcgtg caaacgaagc
    20101 aactgctgag cgtgtagaag acatcacttc tgttatttct gttggcgatt caatcgaagc
    20161 gaaatacacc ggtgttgatc gtaaatctcg cgtagttaac ttatctgttc gtgcaaaaaa
    20221 cgaagctgaa gaatcagcag caattgcaca agtgaacaaa gaggaagttg ttgtacctaa
    20281 tgcatttgct gaagctttca aagcagctaa aggcgaataa ttagtataga ctaatctaaa
    20341 atgggtatgt tttgaacata cccatttaaa cttagaaatg
//
LOCUS       DANLXO010000041        20220 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.041, whole genome shotgun sequence.
ACCESSION   DANLXO010000041 DANLXO010000000
VERSION     DANLXO010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20220
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.041"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            35..1480
                     /gene="aldA"
                     /locus_tag="PXD69_001236"
     CDS             35..1480
                     /gene="aldA"
                     /locus_tag="PXD69_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDL6283442.1"
                     /translation="MVKQHKMYINGEFVPALDGRTLAVYNPATEKAISEVPRGGADDA
                     KIAIDAAEAAQEAWERLPAIERGKYLRQIAVGIRERADEIARTISEEMGKTLSLATVE
                     VHFTADYLDYMAEWARRYEGEIIQSDRPNEHIFLYKKAIGVTTGILPWNFPFFLIARK
                     AAPALVTGNTIVIKPSEDAPNNAILFSEIVHQVGLPKGVFNVVTGYGNEVGPELSGNE
                     KIGMVSFTGSQFAGQKVMEAASKNIIKVNLELGGKAPAIVLDDADLELAATAVVNSRI
                     INSGQVCNCAERIYVQSSIKEQFVQKLVEKMQAVKYGNPLEQQDIDMGPMVNEKGLHK
                     VQEMVTHALHQGGNLVLGGNVVEGTGYYFEPTIIDNVDNSMDIMRHEIFGPVIPVATF
                     DTIDEAIRLANDCEYGLTSSVYTQNINKAMKVISRLKFGETYVNRENFEAMQGYHAGW
                     RKSGIGGADGKHGLEEYLQTQVVYLQFDDKV"
     gene            1736..2383
                     /locus_tag="PXD69_001237"
     CDS             1736..2383
                     /locus_tag="PXD69_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HDL6283443.1"
                     /translation="MSIFQQTNPNRRRYGLAVFIGIIAGIISAFVKWGAEHPFPPRSP
                     IDLFTAACPQPVLDAMNAAADQVAAKTIALQECSRAFLNPPHVFLRDYIGIDPTEAAF
                     TFADHAFNWIGVTHMIFSLVFAIGYCIVAEIFPKIKFWQGIGAGIIANICVHYITFPA
                     LGLTPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITREPDAEVPLDQPFR"
     gene            complement(2516..3892)
                     /gene="trkA"
                     /locus_tag="PXD69_001238"
     CDS             complement(2516..3892)
                     /gene="trkA"
                     /locus_tag="PXD69_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HDL6283444.1"
                     /translation="MKVIILGAGQVGSTLAENLVSEDNDIVLVDNDPTRLDKLKDKHD
                     LQVIRGEYASPQTLRDAGAGDADLLVAVTNSDEVNMIACQIAYTLFNVPTKIARIRSA
                     DYVRERERLFNDDVLPIDHIIAPEILVKEDILRLIHYPGALQITHFADELVSIVNVKA
                     YYGGPLVGYPISALRDHLPHIDARVVAIFRQDKAIVPQGSTIIEAGDEVFFICATQHI
                     RAVMSELQRLDRPHKRIMIVGGGSIGSSLARDLEDQYRVKIIERNPVRAEKLAEKLSK
                     TMVLTGDASDEELLFEEHIENIDLFLAVTSDDEANIMSALLAKRLGAKKVIILVQRPA
                     YLHLIQGGTIDIAISPQQATISALASYVRKGDILQVSSLKLGVAGAVEIIAHGDATTS
                     KVVGRQIRELKLPQGAIVGAVVRGEEVIIAHKSTMIAENDRVIIFVNDKKQIDEIEKL
                     FQLGVFFL"
     gene            complement(3892..5223)
                     /gene="rsmB"
                     /locus_tag="PXD69_001239"
     CDS             complement(3892..5223)
                     /gene="rsmB"
                     /locus_tag="PXD69_001239"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDL6283445.1"
                     /translation="MKKQSFKALSSRAISATIILQVLDQGKSLSTLIPDAQKQLEPKD
                     LPLVQEITFGVCRVLPRLESIIKLLVEKPLKGKTRLVHCLLLVGLYQLLYMRVPAHAA
                     VDEVVNATKTLKLDSFRALTNGVLRRFLREQEEILAKVDKHWQTLHPEWLVNKLKKAY
                     PNWREIVEANNQRPPMWIRVNQQHIKTNDYAALISELVEPEFAKNSENPTACVPKCAL
                     LLERAVNVNQLPHFEQGWATVQDAHAQWSAELLGAENGETVLDACAAPGGKTTHILEK
                     APKAKVMALDIEESRLSRVRENLVRLGQIAQVICGDASKPEEWLEEGVLFDRILLDAP
                     CSATGVIRRHPDIKWLRKEGDIAELATLQGEILKALWQRLKPNGILLYATCSVLPQEN
                     SEQIQRFLQDTPNAKQLEIDFNGEKVLEKQFFPQPNGGDGFFYAKLQKVAE"
     gene            complement(5275..5700)
                     /locus_tag="PXD69_001240"
     CDS             complement(5275..5700)
                     /locus_tag="PXD69_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL6283446.1"
                     /translation="MYNKLLIAIDLADLKSAKYVVDTALQMTAKNPNAVYRVVSIIEP
                     VDNSLISAFLPKNFDKEVVAEANQKLHEFTKNHFPEGSKVQHIVAYGTIYEEICRIAD
                     EKSVDLIMMLASSKPNAKGLSSNTVKVARNTTKPILVLR"
     gene            complement(5793..8441)
                     /locus_tag="PXD69_001241"
     CDS             complement(5793..8441)
                     /locus_tag="PXD69_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HDL6283447.1"
                     /translation="MSVESKVDYDDLQDMVASNDSGGRTPSGLAKKAIVYVAILWSVF
                     QIYYASPLPFVFQEWLTHAGINLNVVVDDTKARSIHLAFAMFLAFLSYPAFASSPKHH
                     IPKIDWVFAIVGAGLALYYIFFYEGLVKRFGAPNTQDIIAGCLGILLVLEATRRSLGL
                     PLVIIAIVFLIYNFFGQYFPADWIVSHRSGSLSQIINQQWITTEGVFGVALGVSTKYV
                     FLFVLFGALLDKAGAGNYFIKTAFAYLGHLRGGPAKAAVVSSALTGLISGSSIANVVT
                     TGTFTIPMMKRVGFTKEKAGAVEVASSVNGQIMPPVMGAAAFLMIEYVNMPYSQLITH
                     AFLPALISYIALVYIVHLEACKMNLQGLPRAEEPSPILVFLLRTVASILVIVGLAIGV
                     YYGLGWIRDVAEDYAFMIVCAFLGLWYLLAIRRVASYPDLEADDPNSEIVSLPKRKPT
                     VNAGLHYLIPVVVLLWCLMVEMLSPGLSAFWGTITLIFIQLTQRPLLNFFRKESVTKE
                     IIKQGVRDVVDSLEAGGRNMTGIALATATAGIIVGVVALTGFGVQLSSVIELLSMGNI
                     VLMLILVAVFSLILGMGLPTTANYIVVSSLMATVIMEVGRQNGLIVPLIAVHLFVFYF
                     GIMADVTPPVGLASFAAAAISGGSPINTGMVAFKYSLRTVILPFLFIFNTDLLLIDLR
                     YPGHGWVVFITATVGVLAFTSATMQYIVTKNKWWETALLVVAAFALFRPGFFMDRIYP
                     SERHIEPVQFEEQLLASKVGQNVTLKVEGLNPYGKEIEFYAQLPVPEGATGEERLKNL
                     GLTLIQTDEKIKVDGVETPKVVIDMVEMDSPAAKAGLNWDQTIHYIAVPQDAPSKDWI
                     FIPALLLVFGIVANQRRRVKKQCVIA"
     gene            complement(8643..9605)
                     /locus_tag="PXD69_001242"
     CDS             complement(8643..9605)
                     /locus_tag="PXD69_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HDL6283448.1"
                     /translation="MKKLVKLSFLASLVMGTASVQAAETFVTIGTGGQTGVYYVVGQS
                     ICQLVNRDSAKTGLKCNAPSTGASVANLNAIAAKEMDMGIAQSDWQYHAYNGSSSFEG
                     KKNDKIRAIFSLHPEPFTVMARTDSGIKSFDDLKAKRVNVGDPGSGTRATMNVILAAK
                     GWTDKDFKVASELKPAEMASVMCDNNLDAITYNVGHPNGALKEAAASCDAKLVPVTGP
                     EIDKLVADHSYYAKATIPGGLYKGSDEPTETFGVYATLVTSADVDADKVYNVTKAVFD
                     NFDRFKRLHPAFEHLKQEEMIKNALSAPLHEGAIRYYKEKGWIK"
     gene            complement(9789..11636)
                     /gene="selB"
                     /locus_tag="PXD69_001243"
     CDS             complement(9789..11636)
                     /gene="selB"
                     /locus_tag="PXD69_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDL6283449.1"
                     /translation="MIICTAGHVDHGKTSLLQALTGTNTAHLPEEQKRGLTIDLGYAY
                     LPIENDILGFIDVPGHQRFLSNMLAGLGGIQHALLVISAEEGIKPQTEEHLDILHLLN
                     FQHIMIVITKADRAEETQISHLIEQVKTSYPFLAEAKTFVTSAKTQQGIEELKAHLIQ
                     LNQQHTQTHKPFRYAIDRVFNVKGAGLVVTGTTVAGKVSVGSELFLSNGKKVRVKAIH
                     AQNTPSETGVAGQRLALNIANVEKEEIKRGDWITELEPKFATDRITVQLTANQAFKEN
                     SIVHLYHFASHITGKLNLLEGQQAVKNQQFFAEVILDEPLHIAVGDKLIIRSGDDSLT
                     LAGAEVLEIHSPKRHKRTEARLALVKNLAKTTACNDFATRLDLYLQNRAMDLSLLLWA
                     EQCFAEDIAKLGFDVSSKWLFNSDFKAQAQQRVLEKMAEYHLQHQDQIGVTKARLYRI
                     ALLDLPENLANQFIEDLVEQKALVNSRGWLHLPEHRIELNADELQIWQQIRPLFEATN
                     QALWVRDIASQLSIDETQMRNLLYKVGKLGYLIPIVKDRFLLSEQIGQFATLIKDFIA
                     QNGSISVNQLRDELQYGRKLTVQLIEYFDRSGFLRRKGDVHLLRDSETF"
     gene            complement(11646..11942)
                     /locus_tag="PXD69_001244"
     CDS             complement(11646..11942)
                     /locus_tag="PXD69_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6283450.1"
                     /translation="MMKFDYNIVWLQKAEIKLFYQADYILQQSQNPIIAEQFYDAIKS
                     EVDKLSFTADVYRLRKKKEIPILNGKYQVKFLIGQENVYIVDFKSARQNSYSFL"
     gene            complement(11939..12115)
                     /locus_tag="PXD69_001245"
     CDS             complement(11939..12115)
                     /locus_tag="PXD69_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283451.1"
                     /translation="MELILAQDLAKLRTDKPQSFYTNDELDLLHQLENGLIETKSHAQ
                     VMEDLRKKLGITEK"
     gene            complement(12184..12816)
                     /gene="pdxH"
                     /locus_tag="PXD69_001246"
     CDS             complement(12184..12816)
                     /gene="pdxH"
                     /locus_tag="PXD69_001246"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005575912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HDL6283452.1"
                     /translation="MDLHHIREDYTKKVLSIRDCHSNPITQFEQWLSEAINAKVNEPT
                     AMNIATVAANGRPSSRMVLLKEVNSQGFVFFTNYQSRKGWEIADNPFGCLTFFWAELQ
                     RQVRIEGKIAKIPEAESDAYFDSRPYTSRLGAWASEQSQPIENYKALLLKSAQFALKY
                     PLSVPRPPHWGGYILIPDSIELWQGRSSRLHDRIHYWLENNEWKKERLSP"
     gene            complement(12874..14256)
                     /locus_tag="PXD69_001247"
     CDS             complement(12874..14256)
                     /locus_tag="PXD69_001247"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDL6283453.1"
                     /translation="MQQLFRQIPSLDLLLKKPQAVELCQKFAYSSVAEQARSLLTQAR
                     QFISQQQALPDFIADENLFFIRLEQKVQALSEVKIRSVFNLTGTVLHTNLGRGLWSEK
                     AIQAATNAMRNNVALEFDIEAGKRSHRDNYISELLQILTGAEAACIVNNNAAAVLLML
                     ATFAQGKEVIVSRGELVEIGGAFRIPDIMAQAGCKLVEVGTTNRTHLKDYRNAITENT
                     AFLMKVHTSNYHIEGFTSSVSEEELVALGKEFNLPVITDLGSGSLTDMQALNLPAEPK
                     VQQKVAAGVDLVSFSGDKLLGGPQAGIIVGSQAMISQLQQHPLKRVLRCDKVILSALE
                     ATLRHYLFPEQLTDNLPTLHLLTQPLETLQHKAERLKQALHKRLNSAYILQIELSLAQ
                     IGSGALPTETLPSVAVTISAEKQSDLIALEQQFKTYPSPIIGRFAQQKFWLDLRSVAE
                     FDKLIEMLEY"
     gene            14324..14418
                     /locus_tag="PXD69_001248"
     tRNA            14324..14418
                     /locus_tag="PXD69_001248"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14358..14360,aa:Sec,seq:tca)
     gene            14625..15314
                     /locus_tag="PXD69_001249"
     CDS             14625..15314
                     /locus_tag="PXD69_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDL6283454.1"
                     /translation="MSTLSRDSILSQIQNGLIASCQPVDDGPMDKPEIVAAMAAASVI
                     GGAKGIRIEGVDNLKAARAAVNVPIIGIVKRDLPDSPVRITPFLEDIDALAEAGADII
                     AVDGTFRTRPVSIEEAVKRIHEKGCLAMADCSTLEEGLHCQQLGFDIVGSTMSGYTGG
                     EMPDEPDYQLVKDLKAAGCNVMAEGRYNTPELAKTAIEIGADYVTVGSALTRLEHIVS
                     WFADSVKSAQK"
     gene            15324..16226
                     /locus_tag="PXD69_001250"
     CDS             15324..16226
                     /locus_tag="PXD69_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HDL6283455.1"
                     /translation="MRCLAIDIGGTKIATAIVQHNQVSQRQQIQTPTDKPQADQAGSL
                     HQAIGEIMQHYQGQFDFVAVASTGIINKGVLTALNPKNLGGLAEFPLKQSIEKHTDKP
                     IALLNDVQAAVCAEYLNEDQQAVKNFVFITVSTGVGGGIILNGELQIGSNGIAGHIGH
                     TLADPNGPLCGCGRVGCVEAVAAGRAIEAVSSQWEKPCSPKEVFERFRQGNPQAVELV
                     QKSAKAIANLIADLKISLDIQKVVLGGSVGLAEGYLPQVSNYLAEMPSVYHCVLENAL
                     SGQDAGLIGAAWWAENQLNQGFTL"
     gene            16251..17129
                     /gene="nanA"
                     /locus_tag="PXD69_001251"
     CDS             16251..17129
                     /gene="nanA"
                     /locus_tag="PXD69_001251"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDL6283456.1"
                     /translation="MKNLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYV
                     GGSTGENFMLSTEEKKEIFRIAKDEAKDEIALIAQVGSVNLKEAVELGKYATELGYDS
                     LSAVTPFYYKFSFPEIKNFYETIIRETGNKMIVYSIPFLTGVNIGVSQFAELFENEKI
                     IGVKFTAGDFYLLERLRKAFPNHLIYAGFDEMMLPATVLGVDGAIGSTFNVNGIRARQ
                     IFELAQQGKIKEAFEIQNVTNDLIEGILGNGLYQTIKGLLELEGVQAGYCREPMTKEQ
                     TPAQKEVTKQLKAKFL"
     gene            complement(17190..17396)
                     /locus_tag="PXD69_001252"
     CDS             complement(17190..17396)
                     /locus_tag="PXD69_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283457.1"
                     /translation="MDNKQTNGFNDIIVKADITQNIWSTGFYDIGRELKSENTRQEKV
                     RLKYNGDTLHRGRKSRMASLIASR"
     gene            complement(17354..17992)
                     /locus_tag="PXD69_001253"
     CDS             complement(17354..17992)
                     /locus_tag="PXD69_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283458.1"
                     /translation="MKKILLLVLLLTLATQADEGNNTQVCAEQQHQIIAHYFKISQEK
                     LSARTLASACKTAPNNSTETLVSYAVIEPKYSKENYQNDENTPKWTLFVARVNDNAIL
                     QSWEQDMEIDASIDVNADSLKIDTARYILNDKVRAFGVRFNNAARGPSAPEYSANDHL
                     MLFVPEKEKLKLVFDYPMTFWSILDDKETKTETQTWYCKWITNRPTASMILL"
     gene            complement(18234..18953)
                     /locus_tag="PXD69_001254"
     CDS             complement(18234..18953)
                     /locus_tag="PXD69_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6283459.1"
                     /translation="MSKPNIYDESFSERMKWIAKNSFKDNYSEFARAVGVAQASLSRW
                     VKGEADPSRSNLVKIAEVSNVSLEWLATGKESKPQSENTSIVAREFERLEKMADDIVS
                     MINSFRTINVSAGFGSFNEGVTKPDGQEPYADSLLQSLGVKAHNCGVFWANGTSMHPT
                     IADSDQMLVDFSKREPRGDDKIYLVQNGESVWVKRIRKEWDYIELISDNESYRPIQIT
                     AEEAQNLQIIGQVVHIGHSLV"
     gene            19130..19408
                     /locus_tag="PXD69_001255"
     CDS             19130..19408
                     /locus_tag="PXD69_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6283460.1"
                     /translation="MSVLNDVKKTAQRDWHKADILAELRKKGWSLRSLAKAGNVSHNT
                     LKSVLDKPYPKMERLVANAIGVAPEVIWAGRTAERIERNRRPTLTNKF"
     gene            19453..>20220
                     /locus_tag="PXD69_001256"
     CDS             19453..>20220
                     /locus_tag="PXD69_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6283461.1"
                     /translation="MSELSLKTHYSVAELLSFKLSSLPSAHKNVLEKAIRENWQSQKR
                     KGRGGGVEYELISLPTEVQQEIRTKLLKLLPAEISKGELSVVRQNIDLEQITDKQLST
                     ADARIMVVRWFLMQEVQLGLSRTKTLDQVIAAVASSEIPAEICKAIMAGNSKAGGKLK
                     LSKRTLHSWVLAYEAGENSAERLKQMIPLKTQKRAVPERCGWLQAFLPFYQTFSNVAL
                     TQAYAQFAMQYEGEDLPTESQVRYALKQLPDYVVQQGR"
BASE COUNT         5828 a         4422 c         4149 g         5821 t
ORIGIN      
        1 tcaacttcca ctgtggataa aaaaggagca actcatggtg aaacaacata aaatgtatat
       61 taatggtgaa tttgtgcctg cgttagatgg tcgcacttta gcagtctata accctgccac
      121 cgaaaaagct atctccgaag tccctcgtgg cggagctgat gatgccaaaa tcgctatcga
      181 tgctgctgaa gccgcccaag aagcttggga acgtttacca gcgattgaac gaggaaaata
      241 tttacgtcaa attgctgtgg ggattcgtga gcgtgccgat gaaattgctc gcactatttc
      301 cgaagaaatg ggtaaaactc tgtccttagc aaccgttgag gtacatttta ccgctgacta
      361 cttagactat atggcagaat gggcgagacg ttatgaaggg gaaattatcc aaagtgatcg
      421 cccaaatgaa catattttcc tatacaaaaa agcgattggc gtcaccaccg gcattttacc
      481 ttggaacttc ccgttcttcc tcattgcccg taaagcggct ccggcattag taacaggtaa
      541 tactattgtg attaaaccga gtgaagatgc acctaataat gcgattctct tttcggaaat
      601 cgtgcatcaa gtcggtttac ctaagggggt atttaatgtc gtcaccggct atggcaatga
      661 agtcgggccg gaactttcag gcaatgaaaa aatcggtatg gtttccttta ccggtagcca
      721 gtttgccgga caaaaagtga tggaagccgc cagcaagaat atcattaaag tcaatttgga
      781 attgggcgga aaagcaccgg ctatcgtatt agacgatgca gatcttgagc ttgctgctac
      841 cgctgtagta aattctcgaa tcatcaattc aggacaggtt tgtaactgtg cagaacgcat
      901 ttatgtacag agttcaatta aagagcaatt tgtccaaaaa ttggtagaga aaatgcaagc
      961 ggtgaaatat ggtaatccat tagaacaaca agacattgat atggggccga tggtaaatga
     1021 aaaaggcttg cataaagtgc aggaaatggt gacacacgca ctgcatcaag gaggtaatct
     1081 ggtattaggt ggtaacgtgg ttgaaggaac aggctactac tttgagccaa ctattatcga
     1141 caatgtagat aactctatgg atattatgcg tcacgaaatt tttggtccgg tcattccggt
     1201 tgcgacattt gataccattg atgaagcgat tcgcttagcc aatgattgtg aatatggctt
     1261 aacctcttcg gtttacacgc aaaatatcaa taaagcgatg aaagtaattt cccgcttaaa
     1321 attcggagaa acttatgtaa accgtgaaaa ctttgaagca atgcaaggct accacgccgg
     1381 ttggcgtaaa tcgggtattg gcggtgctga cggtaagcac ggcttagagg aatacctaca
     1441 aactcaggtg gtttatctgc aatttgatga taaagtatag attcttctaa aaactcccac
     1501 ttatcaaaat aagcgggagt tttcttttag gttaaccttg tatcaaaatt gcaaacaaaa
     1561 atattctaat gttaagtaaa tgtttaataa ttatttatgg ttaactcttt ttggctaatt
     1621 aatttgcaat ttaaattaat tgagtgcaga atgccattag ccttttttga aatcacattc
     1681 cataaaatgg cttgattaac acaacacaat tatcactcaa attaggattt tcattatgag
     1741 tattttccaa caaaccaatc caaaccgccg tcgttatggg ctagctgtat ttatcgggat
     1801 tattgccggt attatttcag cattcgtaaa atggggggca gaacatcctt tcccacctcg
     1861 tagccctatc gatctgttta ccgctgcttg cccgcaacct gtgttagatg caatgaatgc
     1921 cgcagcagac caagtggctg ccaaaaccat cgcattacaa gaatgttcac gtgcattttt
     1981 aaacccacca cacgttttct tacgtgatta tattggtatc gatccaactg aagcagcatt
     2041 tacctttgct gaccacgcgt tcaactggat tggtgtcacc catatgattt tctcgttagt
     2101 ctttgcgatt ggttactgca ttgtggcgga aatcttccca aaaattaaat tctggcaagg
     2161 tatcggtgcc ggtatcatcg ctaatatttg tgttcactac atcaccttcc cggcattagg
     2221 tttaacacca ccggttgctg aatggccgtt atatgaacac atttctgaat tagttggtca
     2281 tattttctgg ttctggacca ttgaggtgat tcgtcgcgat ttacgtaacc gtattacgcg
     2341 tgaacctgat gccgaagtgc cgttagatca accgttccgt taatttaaaa ttagctcgat
     2401 ttatacaaaa gccgcaatca cgttgcggct ttcttatttt acaagcggtc aaattttcat
     2461 gaaaatttac caaacaaaaa gcacattgtt tcatgtagca atgcggagct tggctttata
     2521 agaaaaatac accaagttgg aacagttttt caatttcatc gatctgtttc ttatcgttca
     2581 caaaaataat cacacggtca ttttctgcaa tcatggtgga tttgtgggcg ataataactt
     2641 cttcgcctcg caccaccgcc ccaacaattg ccccttgcgg tagttttaat tcacggattt
     2701 gtcgtccaac cacttttgaa gtggttgcat cgccgtgagc gataatttct accgctcctg
     2761 caaccccaag tttgagtgaa gaaacttgta aaatatcgcc ttttctaacg taactagcga
     2821 gagcagaaat agtagcttgt tgtggggaaa tggcaatatc aatagtgcca ccttgaatca
     2881 ggtgtaaata ggcagggcgt tgcactaaaa taatcacttt tttcgcccca agccgttttg
     2941 ccagcagggc ggacataata ttcgcttcat catcactggt gacggcaagg aataaatcaa
     3001 tattctcaat atgctcctca aacagcaact cttcatcgga ggcatcaccg gtaagcacca
     3061 tcgttttaga tagtttttct gctaattttt cggctcgaac cggattgcgt tcgataattt
     3121 ttacccgata ctgatcttct aaatcccgag ctaacgaaga gccgatgctc cctccaccga
     3181 caatcataat ccgcttatgt gggcgatcaa gccgttgtag ttcactcatt actgctcgaa
     3241 tatgttgggt tgcacagatg aaaaagactt catcacctgc ctcaataata gttgaacctt
     3301 gtggcacaat cgctttgtct tggcggaaaa ttgccacgac ccgagcatca atatgcggta
     3361 aatgatcacg cagggctgaa atcgggtaac cgaccaaagg cccaccgtaa taggctttta
     3421 cattcacgat actgactaac tcatcagcaa aatgagtaat ttgcaacgcc cccggatagt
     3481 gaataaggcg taaaatatct tctttgacta aaatttcagg ggcaataata tggtcaatag
     3541 gcaatacatc atcattaaac aaccgctctc gttctctcac ataatcagca ctgcgaatac
     3601 gggcaatttt ggtcggcaca ttaaataaag tgtaagcaat ttggcaagcg atcatattca
     3661 cttcatcact attagttaca gcaactaata gatcagcatc acctgcaccg gcatcacgca
     3721 aggtttgagg tgaagcatat tcgccccgaa tcacctgtaa atcgtgttta tctttgagct
     3781 tgtctaaacg agttgggtca ttatccacca agacaatatc attgtcttca ctcaccaaat
     3841 tttctgccag cgtagaacca acttgtcctg cccctaaaat aattactttc attactctgc
     3901 tactttttgt agttttgcgt agaagaaacc atcaccaccg tttggttgtg ggaagaactg
     3961 tttttctaac actttttcgc cgttaaaatc gatttcaagt tgttttgcat tcggtgtatc
     4021 ttgtaaaaac cgttgaattt gctcgctatt ttcttgcggt aacaccgagc aagtggcata
     4081 taacaaaatg ccgtttggct ttaacctttg ccataacgcc ttgagaatct caccctgtaa
     4141 tgtggctaat tctgcaatat caccctcttt acgcaaccat ttaatatcag ggtggcggcg
     4201 aatgactccg gttgcggaac aaggggcatc aagtaaaatg cggtcaaaca gcacaccctc
     4261 ttcaagccat tcctcaggtt tggaagcatc gccacaaatt acctgtgcaa tctgccccag
     4321 tcggactaag ttttcacgca ctcggcttaa acggctctct tcaatatcca acgccataac
     4381 ctttgctttc ggtgcttttt ctaaaatatg ggtagttttg ccacccggtg cggcacaggc
     4441 atctaaaacg gtttcaccat tttctgcccc gagcaactcc gctgaccatt gtgcgtgagc
     4501 atcttgcacg gttgcccaac cttgctcgaa atgtggcagt tggttcacat ttaccgctct
     4561 ctccagcaat aaagcacact ttggcacgca agcggtcgga ttttctgaat tttttgcaaa
     4621 ttcaggctca accagctcgc taatcaacgc cgcataatca ttggtcttga tatgttgttg
     4681 attgactcga atccacattg gtgggcgttg gttgtttgct tcaacaattt ctcgccagtt
     4741 cggataggct tttttaagtt tattgaccaa ccattcaggg tggagcgttt gccaatgttt
     4801 atctaccttc gctaagattt cttcttgctc tcgcagaaaa cggcgtagca caccgttagt
     4861 caaggctcgg aagctatcca gttttagcgt tttagttgca ttcactacct catcaaccgc
     4921 agcgtgtgcc ggcactcgca tataaagcag ttggtataaa cccactaaca gtaagcaatg
     4981 caccaaacgg gttttgcctt tcagcggttt ttcaactaat aatttgatga tcgattccaa
     5041 gcgaggcagc acacggcaca ctccgaaggt gatttcttgc actaagggta aatcttttgg
     5101 ttcaagctgt ttttgagcgt caggaatcaa ggtggaaagt gatttacctt gatctaacac
     5161 ctgtaaaata atggttgcac ttattgctct agaagaaagt gctttgaacg attgtttttt
     5221 cataaataaa aatgccattc cgacagaatg gcactattgt aactgaatgc gggattatct
     5281 taaaactaaa attggcttgg tggtgttgcg agccacttta accgtattag agcttaagcc
     5341 cttcgcattt ggtttgctgc ttgccagcat cataattaaa tccaccgact tttcatcggc
     5401 aatacggcaa atttcttcat aaatcgtacc atacgccaca atgtgctgca cttttgaacc
     5461 ttcaggaaaa tggtttttgg taaattcgtg caatttttgg tttgcttcag ccaccacttc
     5521 tttatcgaaa tttttcggca agaatgcaga aattaagctg ttatccaccg gctcaataat
     5581 agacacaacc cgataaaccg cattcggatt ttttgccgtc atttgtaatg ccgtatctac
     5641 cacatattta gcacttttta ggtcggctaa atcaatcgca ataagtaatt tgttatacat
     5701 atttattccg taggggcagg tcctgtgcct gcccgaatat taactaaaat agcggacggg
     5761 cacaggaccc gtccctacat agcatataaa tactatgcaa taacacactg ttttttcact
     5821 ctacggcgtt ggtttgccac aataccaaat accaacaata gagcaggaat gaagatccaa
     5881 tctttagaag gagcatcttg cggtacggca atgtagtgaa tggtttgatc ccagtttaag
     5941 cctgctttag ctgccggaga atccatttct accatatcaa tcaccacttt tggtgtttct
     6001 acgccatcaa ctttgatttt ttcatcggtt tgaattagcg ttaagcctaa gtttttcaaa
     6061 cgctcttcgc cggttgctcc ttccggtaca ggtaattgag cgtagaactc aatttcttta
     6121 ccgtaagggt ttaatccctc tacttttaaa gtaacatttt gacctacttt gcttgcaagc
     6181 aactgttctt caaactgcac cggctcgata tgacgttcag acggataaat tctgtccata
     6241 aagaagcccg gacggaacaa ggcgaaagcg gctacaacca gcaacgccgt ttcccaccat
     6301 ttgtttttag tcacaatata ttgcattgta gcagaggtaa aggcgagaac cccaacagtt
     6361 gcggtaataa acacaaccca gccgtgcccc ggataacgca gatcaattaa taataaatcg
     6421 gtattaaaaa taaataagaa cggtaaaatg acggttctta aactatattt aaatgccacc
     6481 ataccggtat taatcgggct accgcctgaa attgctgccg cagcgaacga ggctaaacca
     6541 acaggtggag tcacatctgc cataatccca aaatagaata cgaataaatg caccgcaatc
     6601 aacggcacga ttaacccgtt ttgacgaccg acttccatga taaccgttgc cattaatgat
     6661 gacaccacaa tgtagtttgc agttgtcggt aagcccattc ccaaaattaa gctgaatacg
     6721 gctaccaaga tcaacattag cacaatgttg cccattgata ggagttcaat cacacttgaa
     6781 agctgaaccc caaagcccgt tagtgccaca acgccgacaa taatccctgc tgttgcggta
     6841 gcgagggcga taccggtcat attacgaccg ccagcctcaa ggctatctac cacatctcga
     6901 acaccttgtt tgataatctc tttggttacg ctctctttac ggaagaaatt cagtaacggg
     6961 cgttgggtta attgaataaa aattaaggta atggttcccc agaatgcgga taagcccggc
     7021 gaaagcattt ccaccattaa gcaccaaagt agcacaacca caggaataag gtaatgtaaa
     7081 cctgcattta cggttggttt tctttttggt agagaaacaa tttctgagtt tggatcgtcc
     7141 gcttctaaat cagggtagct tgccacacgg cgaatagcca gtagatacca taagcctaag
     7201 aaagcacaga caatcataaa cgcataatct tctgccacat cacgaatcca acctaagccg
     7261 tagtaaacgc caatcgctaa tcctacgatc actaaaattg aagctacggt tcttagcaag
     7321 aagactaaaa tcgggcttgg ctcttcggct cttggtaagc cttgtaaatt catcttacaa
     7381 gcttctaaat gcacgatata caccaacgca atatacgaaa ttaacgcagg taagaaggcg
     7441 tgagtaatca gctggctata cggcatattc acatattcga tcatcaagaa cgctgcagcc
     7501 cccattaccg gtggcataat ttgaccgttt actgatgagg caacttccac cgcaccggct
     7561 ttttctttgg taaagccgac ccgtttcatc attggaatag tgaatgtacc tgtcgtcacg
     7621 acgtttgcaa tcgaagagcc tgaaatcaag ccggttaaag cggaagaaac caccgccgct
     7681 tttgccggac caccacgcaa atgccctaaa taggcaaagg cggttttaat aaagtagtta
     7741 cctgctcctg ctttatcgag caacgcccca aataatacga acaggaacac atatttggtc
     7801 gaaaccccaa gggctacacc aaacacgcct tcagtggtaa tccattgttg gttgataatt
     7861 tgagaaagcg aacctgagcg gtggcttaca atccaatctg ccgggaaata ttgcccgaag
     7921 aagttataga tcaggaatac aatcgcaata atcacaagcg gtaagccaag actacggcgg
     7981 gtcgcttcca gcaccaataa aatccctaaa cagccggcga taatatcttg cgtatttggc
     8041 gctccaaaac gtttcaccaa accttcatag aagaaaatat aatacaacgc taacccagct
     8101 cctacgatgg caaacaccca atctatttta ggaatatgat gtttaggcga gctggcaaaa
     8161 gcagggtaag ataggaacgc caagaacatt gcaaaggcta agtggataga acgggctttg
     8221 gtgtcgtcca ccaccacatt caaattaatg cctgcgtgag taagccattc ttggaataca
     8281 aacggcaatg gagaagcata ataaatttgg aacacagacc aaagaatggc gacatacaca
     8341 atggcttttt tcgcaagacc ggacggggtt cgccccccac tgtcattgga ggcaaccata
     8401 tcttgtaggt catcgtaatc aaccttagat tcaactgaca taaagactcc tcaaaacgca
     8461 agcggtcatt ttcttattaa attttacaaa tttcctcaaa aaacaaccgc ttgctcgtga
     8521 aaacactgtt gataagttat caattaaagg tgaaaatcga taacttatca acagtttcaa
     8581 aaaagcaaaa aaccagcacg ctaaaaaacg tgctgattga atcaaattac agaaaggaaa
     8641 tattacttaa tccaaccttt ctctttatag taacgaattg caccttcgtg taacggagca
     8701 gaaagggcgt ttttgatcat ctcttcttgt tttaagtgtt caaacgccgg atgtaaacgt
     8761 ttgaaacggt cgaagttatc aaataccgct ttggttacat tgtacacttt atctgcatcc
     8821 acatcggcag aagtcactaa cgttgcatat acaccgaagg tttctgtcgg ctcatccgaa
     8881 cctttatata aaccgcccgg aatcgtagct ttggcataat atgagtgatc tgccactaat
     8941 ttatcaattt cagggccggt taccggcact aatttcgcat cgcaagaagc ggctgcttct
     9001 tttaacgcac cattcgggtg acctacgtta taagtgatgg catctaagtt gttatcacac
     9061 attacagatg ccatttctgc cggtttcaat tcagaagcca ctttgaaatc tttatccgtc
     9121 cagccttttg ccgctaaaat cacgttcatt gttgcacgag taccggaacc cgggtcgccc
     9181 acgtttacac gttttgcttt taaatcatcg aacgatttaa tgcctgaatc ggtacgagcc
     9241 attactgtaa acggttccgg gtgaagcgag aaaatggcac gaattttatc gtttttctta
     9301 ccttcaaatg agcttgagcc gttataggcg tggtattgcc agtctgattg tgcaatcccc
     9361 atatccattt cttttgctgc aatcgcattt aagtttgcaa ccgatgcccc tgttgaagga
     9421 gcgttacatt ttaaacctgt ttttgctgaa tcacggttta ctaattggca aatagattga
     9481 cccacaacat aataaacacc ggtttgaccg cctgttccga tagtcacaaa tgtttcagcc
     9541 gcttgaacag atgctgttcc catcacaagg cttgcaagga aagaaagttt gactaatttt
     9601 ttcattttta actcctaaaa ttaaggatca gaaaacaaag atttattgtt ttgagccact
     9661 gctcacacta caagagatac aaaacttctt tgagttgcat ttgcctctta gagcttgttt
     9721 ttagcataga ttttataatt agtaaattta ttttttcgca taaaaaaatc tatgcctaat
     9781 gccacaagct aaaatgtttc actatctctt aacaaatgca catcgccttt tcgtcttaaa
     9841 aaaccgctac gatcaaaata ttcaattaat tgtaccgtca attttcgccc atactgcaac
     9901 tcatctcgca actggttcac cgaaatgctg ccgttttggg cgataaaatc tttaattaac
     9961 gttgcaaatt gcccgatttg ttcgcttaat aaaaatctat ctttgacgat tgggattaaa
    10021 tagcccaatt tcccgacttt atacagcaaa ttccgcattt gggtttcatc aatcgagagc
    10081 tggcttgcaa tatccctcac ccaaagagct tgattggttg cctcaaacag cggtcgaatt
    10141 tgttgccaaa tttgcaattc atcggcgttc aattcgattc gatgttccgg caaatgtaac
    10201 caaccacgac tattgaccaa ggctttttgc tccaccaaat cctcaataaa ttgatttgcc
    10261 aagttttcag gcaaatccaa taacgctatg cgatataaac gagctttggt cacgccgatt
    10321 tgatcttgat gttgcaggtg gtattctgcc attttttcca acacccgttg ctgggcttga
    10381 gctttaaaat ccgaattaaa taaccattta gacgagacat caaaccccag ttttgcaata
    10441 tcctctgcaa aacattgctc cgcccataac agcaaggata aatccatcgc tctgttttgc
    10501 agatagagat caaggcgtgt cgcaaagtca ttacaagcgg tggtttttgc taaatttttt
    10561 accaaagcta aacgggcttc ggtacgttta tgccgttttg gtgagtgaat ttccagcacc
    10621 tccgctccgg ctaacgttag gctgtcatca ccgctgcgga tgatcaactt atcaccaacg
    10681 gcaatatgaa gtggttcatc taaaatcact tctgcaaaaa attgctgatt tttgaccgct
    10741 tgttgcccct caagcaaatt caatttgccg gtaatgtgcg aagcaaaatg gtaaagatgc
    10801 acaatgctgt tttctttgaa ggcttgattg gcagtgagtt gaaccgtaat gcgatcggtg
    10861 gcaaatttcg gctcaagctc ggtaatccaa tcgcctcgct tgatttcctc tttttccacg
    10921 ttagcgatat ttaacgccaa acgttgccct gccactcccg tttccgaagg cgtattttgg
    10981 gcgtgaatcg ctttgacccg cactttttta ccattcgaca aaaataactc agagccaacg
    11041 ctcacttttc ccgccaccgt tgtgccggta acgaccaacc ctgctccttt cacattaaac
    11101 acacggtcaa tcgcataacg gaacggttta tgggtttggg tatgttgttg atttaattga
    11161 attaaatgtg cttttaattc ttcaatccct tgttgcgttt ttgccgaagt aacaaaggtt
    11221 tttgcttccg ctaaaaacgg atagcttgtt ttcacttgct caattaagtg gctgatttga
    11281 gtttcttccg cccgatctgc cttagtaatc acaatcataa tatgctggaa attcagcagg
    11341 tggagaatat ccaaatgctc ttcggtttgt ggcttaatcc cttcttcggc agaaatcacc
    11401 aacagggcgt gttgaatgcc gccaagccct gccagcatat tagataaaaa acgctgatga
    11461 cccggcacat caataaaccc taaaatatcg ttctcaatcg gtaaataggc atagcccaaa
    11521 tcaatggtta gcccacgttt ttgttcttcg ggcaaatggg cggtgttagt gccggttaag
    11581 gcttgtaaaa gcgatgtttt gccgtggtca acgtgaccgg cggtgcagat gatcattgat
    11641 agtccttata aaaatgagta actattctgg cgagcagatt taaaatctac aatatagaca
    11701 ttttcctgac caatcaggaa ctttacttgg tacttaccgt ttaaaatggg aatttctttt
    11761 ttcttgcgaa gtcgataaac atcggcagta aaggaaagtt tatccacttc actttttatt
    11821 gcatcataaa attgttctgc aataatcggg ttttgggatt gttgtaatat ataatctgct
    11881 tgataaaaca attttatttc tgctttctgt agccaaacaa tattgtaatc aaacttcatc
    11941 atttttccgt gattcccaat tttttgcgta aatcttccat cacctgagcg tgggatttag
    12001 tttcaattaa gccattttct aattgatgta ataaatcaag ttcatcatta gtataaaaac
    12061 tttgtggctt atctgtgcgt aattttgcta aatcttgtgc gagtatgagt tccatatttc
    12121 ccccttacaa acttagatta ttcaatattg taacctgata aaactaaagt tcaaggagtg
    12181 tatttaaggc gataaccgct cttttttcca ctcattattt tccaaccaat aatgaatgcg
    12241 gtcgtgtagc cggctacttc tgccttgcca gagttcaata ctgtcgggaa tcagaatata
    12301 gccaccccaa tgcggtgggc gaggcactga aagtggatat ttcaatgcaa attgagctga
    12361 ttttagcaac aaagccttgt agttttcgat aggctgactc tgctcgctcg cccaagcccc
    12421 caaacggctg gtgtaaggac gagagtcaaa ataggcatcg gattctgcct ctggaatttt
    12481 tgctattttc ccttcaatcc gcacttgacg ttgtaattct gcccaaaaga aggttaaaca
    12541 tccaaaagga ttatcggcaa tttcccaccc tttacggctt tgataattgg taaagaacac
    12601 aaagccttgt gaatttacct ctttcaacag caccattcgg ctacttggtc gcccgtttgc
    12661 tgcaacggta gcaatattca ttgctgtcgg ctcattcact ttggcattga ttgcctcact
    12721 caaccattgt tcaaattggg tgattgggtt tgagtgacaa tctcggattg aaagcacttt
    12781 tttggtgtaa tcttctcgaa tgtggtgcag atccataagg attcctttat cttattctaa
    12841 ataatcggac aggcacagtc tgccctacca aaattaatat tccaacatct caatcaactt
    12901 atcaaactcc gcgaccgagc gtaaatctaa ccaaaatttc tgctgagcaa aacgcccgat
    12961 aatcgggctt gggtaggttt taaattgttg ttccaatgca attaaatcgc tctgtttttc
    13021 agcggaaata gtcactgcca ccgaaggtaa ggtttctgtg ggtaacgcac cgctgccgat
    13081 ttgagcgagg cttagctcaa tttgcaaaat ataagcagaa tttaaccgct tgtgtagtgc
    13141 ctgttttaat cgctctgctt tgtgttgcaa ggtttcaagc ggttgagtga gtaaatgaag
    13201 agtcggcaag ttatcggtta attgctccgg aaataagtag tggcgtagcg ttgcctcaag
    13261 tgccgataaa atcactttat cgcaacgtag cacccgtttt agcgggtgtt gttgcagttg
    13321 gctaatcatc gcttggctac cgacaataat gccggcttgc ggcccgccta ataatttatc
    13381 gccagagaag gaaaccaaat ctaccccagc cgctactttt tgctgaacct ttggctcagc
    13441 aggcaaatta agagcttgca tatcagttag cgaaccactg cctaagtcgg taatcacagg
    13501 caggttaaac tctttaccga gagccaccaa ttcctcttcc gacaccgaac tggtgaaccc
    13561 ctcaatgtgg tagttactgg tgtgaacttt cattaaaaag gcggtatttt cggtgatcgc
    13621 gttgcgataa tcctttaaat gagtgcgatt agtcgtacca acttccacca atttgcaacc
    13681 ggcttgagcc ataatatccg gaatgcggaa tgccccgcca atttccacca gctcgccacg
    13741 ggaaacgatg acttccttgc cttgtgcgaa ggttgctaac atcaacaaca ccgctgccgc
    13801 attattattc acaatgcaag cggcctccgc tccggtaagt atttgcaaca actcggaaat
    13861 gtagttatct cggtgcgagc gcttgcctgc ttcaatatca aattccaacg ccacattgtt
    13921 tcgcattgcg ttggttgctg cctgtatcgc cttttccgac cacaacccac gccctaagtt
    13981 ggtgtgtaac accgtaccgg ttaagttgaa cacggaacgg attttcacct cactcaacgc
    14041 ttgcactttt tgttccagcc ttataaaaaa caggttttca tcggcaataa aatccggcaa
    14101 ggcttgctgt tgggaaataa attgacgtgc ttgagtaagc aaactcctag cttgttcagc
    14161 cacgctggaa tatgcaaatt tttggcataa ttcgaccgct tgtggctttt tcaacaagag
    14221 gtcgagcgag ggaatttggc gaaatagttg ttgcataatg tgaatgattg agagaatatt
    14281 ttggacaatt ctaataaata aagtacaata ttgccaattt ttcggaagtg cgtcatctcc
    14341 ggtgaggtgg caggacttca aatcctgttg aggacgccag cgttctcggg tgggttcaac
    14401 tcccatgcac ttccgccaca tttcaaaagc cgttaatctt taacggcttt ttgcatttct
    14461 gccacattct ctctttccgt tttgataaaa aatgagactt agctcacatt tttttatttt
    14521 tctgtttgta gtaaaaattt attaaattat aattatttgg agtatttttt cacaaacaaa
    14581 atctagtcca ttgactacct tttgaacata aaaaaggaac tgttatgtca acactatctc
    14641 gtgattctat tttaagtcaa attcaaaacg ggctgattgc ctcctgccaa ccggttgatg
    14701 acggccccat ggataaacct gaaattgtcg ccgcaatggc agcagcctct gtgattggtg
    14761 gtgctaaagg cattcgcatt gaaggtgtcg ataatttaaa agccgctcgt gcggcagtga
    14821 atgtgccgat tatcggcatt gtaaaacgtg atttgccaga ttcccctgtg cgtattacgc
    14881 catttttaga agatattgat gccttagccg aagccggtgc cgatattatt gcggtggacg
    14941 gcacattccg cacccgcccg gtcagcattg aagaggcggt aaaacgcatt cacgaaaaag
    15001 gttgcttggc aatggcggat tgctccaccc ttgaagaagg tttacattgc caacaattag
    15061 gctttgatat tgtgggtagt acaatgtctg gctacaccgg tggcgaaatg cctgatgagc
    15121 cggactatca attagtgaaa gatttaaaag ctgccggctg taatgttatg gcggaaggtc
    15181 gctacaacac gcctgaactg gcaaaaacgg cgattgaaat cggggcggat tacgttaccg
    15241 ttggatcggc attgacccgc ttagagcata ttgtgagctg gtttgccgac tctgtaaaat
    15301 cggctcaaaa ataggagctg cttatgcgtt gtttagcaat agacatcggt ggcacgaaaa
    15361 ttgccacggc aattgtgcaa cacaatcaag tgtcacaacg ccaacaaatt cagaccccga
    15421 ctgataaacc acaagctgat caggcaggca gtttgcatca agcgattggt gagataatgc
    15481 aacattatca agggcaattt gattttgtgg cagttgcctc aacaggcatt atcaataaag
    15541 gggtgcttac cgcattaaat cctaaaaatt taggcggatt ggcagaattt ccgttgaaac
    15601 aaagcattga aaaacatacc gataagccga ttgcattatt aaatgacgtg caagcggcgg
    15661 tgtgtgccga atatttaaat gaagaccaac aagcggtcaa aaattttgta tttattaccg
    15721 tttccaccgg cgtaggcggc ggcattattt taaacggcga actgcaaatc ggcagtaacg
    15781 gcattgcagg acatatcggg catactctag ccgatccgaa cgggcctctc tgtggttgtg
    15841 gacgagtcgg ctgtgtcgaa gcagtcgcag cagggcgtgc aatagaggca gtttccagcc
    15901 aatgggaaaa gccttgttca ccgaaagagg tgttcgagcg attccgccaa ggcaacccac
    15961 aagcggtcga attagtacaa aaatctgcaa aagcgattgc taatttaatt gcagatttaa
    16021 aaatcagttt agatatacaa aaagtggtgt taggtggcag tgtgggctta gcggaagggt
    16081 atttaccgca ggtgtccaac tatttagctg aaatgccgag cgtatatcat tgcgtattgg
    16141 aaaatgctct atccgggcaa gatgccggct taatcggtgc ggcttggtgg gcggaaaacc
    16201 aacttaatca aggttttact ctttaacaaa ttctaactcc ggagatccaa atgaaaaact
    16261 taaaaggtat ttttagtgcg ttactcgtct ctttcaacga agacggcacc atcaacgaaa
    16321 aaggcttacg ccaaattatc cgccacaaca tcgacaaaat gaaagtggac ggtttatatg
    16381 tcggcggttc aaccggtgaa aactttatgc tttctaccga agagaaaaaa gaaattttcc
    16441 gcattgccaa agacgaagcg aaagatgaaa tcgcccttat cgcccaagtc ggtagcgtaa
    16501 acttaaaaga ggcggtagaa ctgggtaaat atgccacaga attaggctac gacagcttat
    16561 ctgcggtcac accgttctac tacaaattca gcttcccgga aatcaaaaat ttctacgaaa
    16621 ccattattcg tgaaaccggc aacaaaatga ttgtttactc cattccgttc ttaaccggcg
    16681 taaacatcgg tgtgagccaa ttcgctgaat tatttgaaaa cgaaaaaatc atcggtgtaa
    16741 aattcactgc cggcgatttc tacctgttag agcgtttacg caaagcgttc ccgaaccact
    16801 taatctacgc aggtttcgat gaaatgatgc taccggcaac ggtattaggt gtggacggtg
    16861 caatcggctc aaccttcaac gtaaacggta ttcgtgcaag acaaatcttt gaattagccc
    16921 aacaaggcaa aatcaaagaa gcatttgaaa tccaaaatgt aaccaacgat ttaatcgaag
    16981 gcattttagg caacggttta taccaaacca tcaaaggctt attggagtta gaaggtgtgc
    17041 aagcaggtta ctgccgtgag ccgatgacga aagaacaaac tccggcacaa aaagaagtga
    17101 ccaaacagtt aaaagctaaa ttcttgtaat ttaagttgca aaaggctaaa cgaaaatcac
    17161 cgcttgtagt aacaagcggt gattttttct caacgacttg caattaatga agccattctg
    17221 ctttttctac cacggtgtaa cgtgtcacca ttatatttta atcgcacttt ttcttggcga
    17281 gtattttctg atttcaactc tctacctata tcataaaacc ctgtactcca gatattttga
    17341 gtaatatccg cttttacaat aatatcattg aagccgttgg tctgtttgtt atccatttgc
    17401 aataccaagt ttgtgtttcc gttttggttt ctttatcatc taaaatagac caaaaagtca
    17461 tcgggtaatc aaaaacaagt tttaactttt ctttttccgg cacaaataac atcaaatgat
    17521 catttgcaga atactcagga gcacttggac cacgagcagc attattaaac ctcacgccga
    17581 aagctcttac tttgtcgttt agaatataac gggcggtatc aattttaaga ctatctgcat
    17641 tcacatcgat agaggcatcg atctccatat cctgctccca cgattgcaat atcgcattat
    17701 cattcacacg agcaacaaaa agcgtccact taggtgtgtt ttcgtcgttt tgataatttt
    17761 ctttgctgta tttaggctct attaccgcat aactcactaa ggtttccgtt gaattgttag
    17821 gagctgtttt acaggcagaa gctaaagtac gagcagaaag tttctcttga gaaatcttaa
    17881 agtaatgagc aataatttga tgttgttgct cagcacaaac ctgtgtgtta ttaccttcat
    17941 ctgcttgagt tgcaagcgta agtaaaagaa ctaagaggag tatctttttc atatagattt
    18001 atccgtatag aaagataact cattctatgg ggtactgact ctttttgcat agagagaaag
    18061 aaaaaaattt ggtcggaaaa ataacggcga gcctagcgaa aacaagggtt cgccgtaatt
    18121 ttatggggga agctatgtaa aaaacaaaat gagcaggatt agaaaaaaat gagcagtttt
    18181 tgcgatattt tttgcatagg tttgatcggt tttaaaacta ttttaaatct gttttaaact
    18241 aaagagtgtc cgatgtggac tacctgcccg atgatttgga ggttttgagc ttcttcggcg
    18301 gtaatctgta ttgggcggta ggactcgtta tcgctaatta attcaatata gtcccattct
    18361 tttctaatcc gtttaaccca tacgctttcc ccattctgca caagataaat cttatcatca
    18421 ccacgaggct ctcgtttgct gaaatctacc agcatttggt cactgtctgc aatggtaggg
    18481 tgcattgatg ttccatttgc ccaaaacacg ccgcagttgt gggcttttac gccgaggctt
    18541 tgcagcaggc tgtcggcgta aggttcttgc ccgtctggct tcgttacgcc ctcgttaaag
    18601 ctgccaaagc ctgctgaaac gttgattgtt ctgaagctgt taatcattga aacaatatca
    18661 tcagccattt tttctagtcg ctcaaactct cttgccacaa tactggtatt ctctgattgt
    18721 ggtttgcttt ccttacctgt tgccagccat tcaaggctca catttgacac ctctgctatt
    18781 tttacaagat ttgaacgaga tggatctgcc tctcctttta cccacctaga tagtgatgct
    18841 tgggctaccc ccactgctct tgcaaactca ctgtaattgt ccttaaagct attttttgca
    18901 atccatttca ttctttctga gaagctctca tcgtaaatgt ttggtttact catcttttac
    18961 gtttccatta ataaagtttt actcgtaaaa catactcata aaccattgat ttttaagtta
    19021 tttatgaata aagcaaaaat attttagatg tttttatgtt ttacggttga tttgtttaaa
    19081 gttttacggt taaatacacg catcaaatag ataaaaagag gtgtatcgaa tgagtgtatt
    19141 aaacgatgtt aaaaaaaccg cacagagaga ttggcataaa gccgatattc ttgcggaact
    19201 tcgtaaaaaa ggttggtcac ttcgttcttt ggctaaagca ggcaatgtta gccataacac
    19261 gctgaagtct gttttagaca agccttaccc caaaatggaa cgcttagttg caaatgccat
    19321 aggggttgcc cctgaagtga tttgggctgg gcgaacagca gaacgcattg aacgtaatcg
    19381 gcgaccaact ttaactaata agttttaatc ataaatgatc tttaacgtaa aagatatagg
    19441 agaagaacat ttatgagcga attaagttta aaaacgcact attcagtggc tgaattgtta
    19501 agttttaagt tatctagcct accaagtgct cataaaaatg tgcttgagaa agcaataagg
    19561 gaaaactggc aatctcaaaa acgcaaaggc agaggcggcg gggttgaata tgaattaatc
    19621 agtttaccca ccgaagtcca acaggaaatc cgcaccaagt tactcaaact tcttcctgct
    19681 gaaatcagca aaggcgaatt gagtgtagtg cgacaaaaca ttgatttgga gcagataacc
    19741 gataaacaac tttctacggc agatgctcgc attatggtgg tgcggtggtt cttgatgcag
    19801 gaagtgcagt tggggctaag ccgcacaaaa acgctagacc aagtcattgc agcggtggca
    19861 agcagtgaaa ttcctgctga aatttgcaaa gcgattatgg cgggcaatag taaagccggt
    19921 ggaaagttaa agctatctaa acgcaccttg catagttggg tgctggcgta tgaggcaggc
    19981 gaaaattcag cggaacggtt aaaacagatg ataccgctga aaacacaaaa acgtgccgtg
    20041 cccgagcggt gtggttggtt gcaagccttt ctgccgtttt atcaaacctt tagcaatgtg
    20101 gcactcacac aggcttatgc tcaatttgca atgcagtatg agggcgaaga tttacctaca
    20161 gagagccaag ttcggtatgc cttgaagcag ttgcccgatt atgtggtgca acaagggcgg
//
LOCUS       DANLXO010000042        19824 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.042, whole genome shotgun sequence.
ACCESSION   DANLXO010000042 DANLXO010000000
VERSION     DANLXO010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19824
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.042"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..274)
                     /locus_tag="PXD69_001257"
     CDS             complement(<1..274)
                     /locus_tag="PXD69_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL6283462.1"
                     /translation="MSIKKVTLASLILLGLTACSSGGSGSSSNNVAKPNTKPQTTQQQ
                     TDKAAAEKAAKDKAAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKE"
     gene            477..1931
                     /locus_tag="PXD69_001258"
     CDS             477..1931
                     /locus_tag="PXD69_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-histidine dipeptidase"
                     /protein_id="HDL6283463.1"
                     /translation="MSEISTLAPQLLWQWFDKACAIPHPSYHENELAEFIVNWAKSKN
                     FFVERDEVGNVLIRKPATKGMENRQTVALQAHLDMVPQANTGTVHDFTKDPIQPYIDG
                     EWVKAKGTTLGADNGIGLASCLAVLDSDDLAHPTIEVLLTMTEEAGMEGAIGLRPNWL
                     TADIMINTDTEENGEIYIGCAGGENVNVTLPIFLVPHQQDSAVTVTLKGLNGGHSGCD
                     IHTTRANAIKVFARILEQAHNEVEFQIAEIQGGSVRNAIPREAHATLVFSAKNQQKLT
                     ACLSQTAEQVKAELKIAEPNFQFLIEEAQLPEQAFDLASTARVIHFLNVMPNGVVRNS
                     DVVENVVETSLSIGVLNTEASEVKATILARSLIEGGKEEIRSKIRSLTALVGAEVEFS
                     GNYPGWEPNPNSKITPLTKAIYDEILGYESQIKVIHAGLECGLINKIYPNMDFVSIGP
                     TILNAHSPDEKVHIPAVEIYWKLLTKLLEQAPEK"
     gene            complement(2006..3295)
                     /locus_tag="PXD69_001259"
     CDS             complement(2006..3295)
                     /locus_tag="PXD69_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283464.1"
                     /translation="MDIRQKIAHNKMTSFQWLVVGLTVLLNMLDGFDLMALAFTAKSI
                     REELQLDGAAIGSLMSAGLFGMAIGSLFLSPLADKFGRRPLLLIGTGLATLGMLLTYF
                     ATSAFEIGVWRVLTGLGVAAILTGTNVLVSEYSSQKWRGLAIAIYASGFGIGAMLGGM
                     SAVLLQGEYGWRAVFLVGSILTGAVFVLLFFVLPESVEFLISKHPVNAKARLNQIAVK
                     LGLGNGWELPEIEAKSKSKVAITRLFEPEYRRNTLLIWLAFIAISASFYFISSWTPAL
                     LEEAGMPKTQSQTVGMAISVGGTIGSLIFGFLVSRWAAKHILQAFSILAASAVVAFVF
                     AGNLGLAITLAILVGGLINGCITGLYTINPTLYAPDFRSTGVGTAIGVGRLGSIVSPT
                     LAGILLDAGWKKNELYLGAAVVLLIAAFTVHFLKQRK"
     gene            complement(3499..3834)
                     /locus_tag="PXD69_001260"
     CDS             complement(3499..3834)
                     /locus_tag="PXD69_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HDL6283465.1"
                     /translation="MVSEQRQNPEEQKSEEQKINVEVLYAYPDKYFLKKLQVPQNATI
                     QTIILLSGVLEKYTEIDLRENKVGIFSRPAKLNETVEEGDRIEIYRPLIADPKEIRRK
                     RAAEQAEKK"
     gene            complement(3824..4258)
                     /locus_tag="PXD69_001261"
     CDS             complement(3824..4258)
                     /locus_tag="PXD69_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HDL6283466.1"
                     /translation="MPIVNQSALVPYSAEQMYQLVNQYEKYPEFLSGCVSTKTLSTGE
                     NELKAELHIQKLGISQTFSTHNKMTPPYKIEMALIEGPFRHLHGAWTFTPFDEQSCKI
                     ALQLNFEFSSPIVAMVFGKVFNELTLKMVNAFKQRAKEVYGV"
     gene            complement(4313..5368)
                     /gene="modC"
                     /locus_tag="PXD69_001262"
     CDS             complement(4313..5368)
                     /gene="modC"
                     /locus_tag="PXD69_001262"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HDL6283467.1"
                     /translation="MLKLKLLQQLGNLTLNVNLDLPNKGITAIFGRSGAGKSSLINLI
                     AGLSTAQAGFIELNGQVLFDSQNGINLPPEKRNIGYVFQEHRLFPHYSVEKNLKYGYK
                     RSDSADFLQIVELLGIAPLLNRYPASLSGGEKQRVAIGRALLSSPNILLMDEPLSALD
                     LPRKQELLDYLDKLSARLEIPILYVSHSLEEVVRLADHLVLLENGKVTAFDTLSAVWH
                     SSAFSAWQPNHQRISLLELPVEETLPHYNMLGLSLNAQRLWVNQLPRHQIGEKLRVTI
                     ASKEVSISLQKPTQSSIRNVLKGNVRKIETHLDRVDLAIQVENQQIWSTISLWSFNEL
                     AIQPEQEVYLQIKSVSL"
     gene            complement(5355..6047)
                     /gene="modB"
                     /locus_tag="PXD69_001263"
     CDS             complement(5355..6047)
                     /gene="modB"
                     /locus_tag="PXD69_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDL6283468.1"
                     /translation="MLNFTPQELNAIVLSLKVASIAVVLALPLAVWVAWLLARKQFWG
                     KNLLNGIMHLPLVLPPVVIGYLLLISMAKRGVIGQYLWEWFHFSLSFSWKGAVLASMV
                     MAFPLMVRSIRLAFEAVDPKLEQAARTLGAIPLKVFFTLTLPLSFSGIIAGGVLGFAR
                     SLGEFGATITFVSNIPNQTQTIPAALFTFIETPDGEMAAARLCLVAILISLIALFCSE
                     WLAERQKRYAQT"
     gene            complement(6231..6986)
                     /gene="modA"
                     /locus_tag="PXD69_001264"
     CDS             complement(6231..6986)
                     /gene="modA"
                     /locus_tag="PXD69_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6283469.1"
                     /translation="MKALKKLAITMALTLSGTAFSQEITVFAAASMTNVLQDIQQDFE
                     KAYPQDKITFSFASSSVLAKQIEQDAPADIFISADQKWMDYVAEKQPEKVKHRRNLVR
                     NELVLIAPTESNIEPKAIQAVDFAKELANSYLSVGDPNHVPAGKYAKKALSHYQLWES
                     VEPRLARAKNVRDALSFVERGESPLGIVYSTDAKVSNKVKVVAVFPPESYGEIVYPAA
                     AVSEKASAATFLDFLKTPKAKAKFEAAGFYPVN"
     gene            complement(7007..7768)
                     /locus_tag="PXD69_001265"
     CDS             complement(7007..7768)
                     /locus_tag="PXD69_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6283470.1"
                     /translation="MNLIGFYTLAYKECRRILRIWRQTLVPPVITTTLYFLIFGTLIG
                     GRIGEMNGVGYTQFIAPGLIMMTAITASYVNTASSFFLSKFTRDFEEMLISPLSTHNI
                     IWGYVTGSILRAGLAATLVMCVAMVFVSFEIYSVAIIVLTLLLTIIAFALGGVINAVF
                     ARSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGLRYGFLGI
                     SDVPLGYTFAVLTSLCIGLYIIAYSLIQRGVGLRS"
     gene            complement(7770..8678)
                     /locus_tag="PXD69_001266"
     CDS             complement(7770..8678)
                     /locus_tag="PXD69_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283471.1"
                     /translation="MKALELIDLVKTYPTGVKAVKGINLVVEQGDFYALLGHNGAGKS
                     TTIGIISSLVNKTSGSVKVFGYDLDTQKVELKHQIGLVPQEFNFNQFEKVIDVLVQQA
                     GFYGIPRSEALVRAEKWLKLLDLWEKRTHLTRELSGGMKRRVMIARALMHNPKLLILD
                     EPTAGVDIELRRSLWDFLRDLNNQGTTIILTTHYLEEAETLCRHIGIIQHGELIENTS
                     MKALLAKLESEVFVLDLQNSEQNQPLVIQNYPHKWLDENTLEVNVKRQQGLTNLFSQI
                     SAQGAEVLSMRNKSNRLEELFINMAQ"
     gene            complement(8684..10741)
                     /gene="dnaX"
                     /locus_tag="PXD69_001267"
     CDS             complement(8684..10741)
                     /gene="dnaX"
                     /locus_tag="PXD69_001267"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDL6283472.1"
                     /translation="MSYQVLARKWRPQRFSEVVGQQHVLSALENSLREDRLHHAYLFS
                     GTRGVGKTSIARLFAKGLNCVNGITAEPCGECANCKAIEEGHFIDLIEIDAASRTKVE
                     DTRELLDNVQYKPTVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQ
                     KLPITILSRCMQFHLRALEQSQIARHLEFILNAENIPFEPLALEKLAKAAQGSIRDSL
                     SLTDQAIAMSNANITLAIVSQMLGLIDDNQPLELVQATAQADGEKAMAIIEQIAAKGV
                     DWQQLLSDVAEVLHKIAMLQLVKTPTTEETLVHFLAKQIPPEDVQFFYQLILNSKKEL
                     PFAPEQRAGVEMAILRALAFHPKQAEKIATVAVEKVTQPNHSVSAVTTAKPQNQISQL
                     RENFEQNQQKTVTVANTTTAVESIAQPPQAVDTAISPSAPATLSPAMAALEARKKLQA
                     QQANLAQTEKKKPELKAPQVIAKKSANQTASLQERFISLAENQHKAVLQVSKKTESAP
                     KSVEDEDYRWTWLNPELENQADSAKPSDIKQAILQERTPELVAKTIHLSCQQDKWCDI
                     ANSLNLGGFSRQIALNSYLAEQNEQHLALVLKPNMAHLDNPESRKNLEAALAEKGYSY
                     ELTIGDNSEQQTPLEIRRAIFKQLTEAAKSALLNDEKLMLLRNAFDAQIDESTIRAVA
                     ETE"
     gene            complement(10832..11371)
                     /gene="apt"
                     /locus_tag="PXD69_001268"
     CDS             complement(10832..11371)
                     /gene="apt"
                     /locus_tag="PXD69_001268"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDL6283473.1"
                     /translation="MNQLDLIKSSIKSIPDYPKAGIIFRDITSLLEVPTAFQATIDAI
                     VAEFKDKGITKIVGTESRGFIFGAPVALALGVPFVLVRKPKKLPREVISQSYTLEYGE
                     DTLEIHKDAVSANDNVLVIDDLLATGGTIDATAKLIRRLGGNVEHAAFVIWLPELGGK
                     ERLEKEGVKSFSLVSFEGH"
     gene            complement(11499..12449)
                     /gene="lpxM"
                     /locus_tag="PXD69_001269"
                     /gene_synonym="msbB"
     CDS             complement(11499..12449)
                     /gene="lpxM"
                     /locus_tag="PXD69_001269"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249087.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HDL6283474.1"
                     /translation="MTRITAQDGYTHKFLWSFLHPKYWGVWLGVLGLVILAYVPVRIR
                     DKLSAFVGKMAYRYLKQKNKKGYHRAKVNLRYCFPDWSEKKREEVVEKMFITVAQTML
                     AIGETAIRPASYLQKRCEFTGFENVVKAKESGKNVIMLVPHTWSIDMAGVAMFSLGYP
                     MTSMYNPHRNALVDWLWNITRERLGGRMHTRQNGIKAFLADVRKGDVGYFLPDEDFGE
                     ELSVYADFFATEKATLPGLNKMARVANAEVIPMFSIYNAEKAKYEMEILPPLEFSGDP
                     IQSAREMNRVIEYFVEKNPEQYVWILRLLKTRRNREDIYL"
     gene            complement(12890..13573)
                     /locus_tag="PXD69_001270"
     CDS             complement(12890..13573)
                     /locus_tag="PXD69_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HDL6283475.1"
                     /translation="MEREQQIPVTNIDVAPKQSSVWKTIFADGVWKNNGALVQLLGLC
                     PLLAVSNSVTNALGLGLATMFVLICTNITVSLFRKITPHDIRIPIYVMVIATVVTAVQ
                     LLMNAFAFPVYQSLGIFIPLIVTNCIVIGRAEAYASKNEVKFSAFDGFSMGLGMTFSL
                     VVLGALREIIGNGTLFSGLDLLLGDWAKALRIDVLHIDSGLLLAILPPGAFIGLGVIL
                     AVKNIIDKR"
     gene            complement(13582..14214)
                     /gene="rsxG"
                     /locus_tag="PXD69_001271"
     CDS             complement(13582..14214)
                     /gene="rsxG"
                     /locus_tag="PXD69_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HDL6283476.1"
                     /translation="MNTSKITLNYALILGFIALLCTAVSTGVYLLTKGKIDDVTAMQQ
                     RKLLEEVVPKSHFDNDVLATCKLVQLENAPYLNRIYVAKKSENLTAYLVQGTAPDGYS
                     GDIVLLMGIEPNGNILGVRTLEHKETPGLGDKIETRVSDWILSFTNQLFSLENEADWN
                     VKKDGGKFDQFTGATITPRAVVNHIRQSAKWVVTELAQNPTMFNQFKACK"
     gene            complement(14214..15269)
                     /gene="rsxD"
                     /locus_tag="PXD69_001272"
     CDS             complement(14214..15269)
                     /gene="rsxD"
                     /locus_tag="PXD69_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HDL6283477.1"
                     /translation="MFKMVSSPHTHSSNLTANFMLWVIAMMLPAFGVQLYYFGYGVLI
                     QTLLAVSLAIVIEIGIAKLRKKTTAFYLADLSGILTALILAMSIPPYAPYWLVLIGVI
                     VALLLAKHSYGGLGQNLFNPAMVGYALLLVSFPVQMTAWIVPIELLSEPPTFRDAISL
                     IFYGVTSDGFSIHQLVNSVDGIAQATPLDSMKSSLAKSGFDAVMNTPIFNGLFATGWL
                     QLNLAFLFGGLVLIYKRIIHWQIPVAMLATFAFFSGFTELFSQQSHLHFVSHFFSGAM
                     MFGAFFIATDPVTASITPRGKLIFGGLVGLLVYLIRYYGNYPDAIAFSVLLANICVPL
                     IDHYTQPRLYGTKLDNR"
     gene            complement(15315..15950)
                     /locus_tag="PXD69_001273"
     CDS             complement(15315..15950)
                     /locus_tag="PXD69_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDL6283478.1"
                     /translation="MFSELIPALPWSFLFIQDLIGTIVFAISGAIAARQHKMDIFGMF
                     ILAFVTGVGGGTLRDMMIGSTPVFWMKQPIYVLMITLAVVITAIFRNQISRKSWQTGL
                     LVFDAIGLGVFTVIGVQKGLDFGLHPLICVALGGVTGCFGGLIRDILRNEVPIILQKE
                     VYVTASLIGGVIFVAANSVGLESDWVYLATVFTVIIIRLLAIRFNLNLPRL"
     gene            complement(15943..18237)
                     /gene="rsxC"
                     /locus_tag="PXD69_001274"
     CDS             complement(15943..18237)
                     /gene="rsxC"
                     /locus_tag="PXD69_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HDL6283479.1"
                     /translation="MSNPNLVIERIRQNKETGKLWDFPGGIHPMENKSQSNSKPIRTL
                     NLPKFFYVPLVQHSGWAGELLVKVGDVVLKGQPLTKGDHFRQLPVHSPTSGRVIGIEP
                     YVSAHASGLPEITVIIETDGKDKWVERQPIEDFLSLTSDQIIQKVYQYGIAGLGGAVF
                     PTATKLSLADKRCKLLVINGAECEPYITCDDRLMQDFTADLIEGIRILRYVLRPEEVV
                     IAIEDNKPHAIQALETALKGSNDMFVRAIPTKYPSGASDQLIQVLTGLEIPAGKRTIE
                     MGIVMHNVGTAFAVKRAIIDDEPLIERVVTLTGDKIRNKGNVWARLGTPIQHLLEQVD
                     YQADKRFPVFLGGPMMGFILPALQAPITKTANCLIAPDHFEYAPPEPERSCIRCSSCS
                     DACPVGLLPQQLYWFARAEDHDKSKEYHLDACIECGVCAYVCPSYIPLIQYFRQEKAK
                     IEEIEEKARKAEEAKIRFEAREARLQKERDARTARISQAAEKRREEVANAGGVDPVKA
                     ALERLKAKKAVETVQEIPAEVQVKPNGEPDNSDLMAQRRARRLAKQAEQAVEKSENVT
                     NALIGANNDLPLQSMNETASDKSVGANNYSPEAESEDPRKAAVAAALARAKAKKQAQQ
                     AVEKSENITNAVIGVNNDLPLQSMNETVSDKSVGANNHSPETESEDPRKAAVAAAIAR
                     AKAKKQAQQAVEKPEDIANAVIGVNNDLPLQSMNETTSDKSVGANNHSPKTESEDPRK
                     AAVAAAIARAKAKKAAQQEKSNNV"
     gene            complement(18224..18841)
                     /gene="rsxB"
                     /locus_tag="PXD69_001275"
     CDS             complement(18224..18841)
                     /gene="rsxB"
                     /locus_tag="PXD69_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HDL6283480.1"
                     /translation="MLDLPIIAYILIAIAVIALIFGAVLGYSSIKLKVESDPIVDQID
                     ALLPQSQCGQCGYPGCKPYAEAIANGDVITKCVPGGQPLVVNLAELLGVEVPPMEGMA
                     EPEMKVAFVIEDLCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNC
                     IEMRPIKPTTQSWNWKFDQDLIIPIVNTTELQRKLVTGGGKNEQS"
     gene            complement(18841..19422)
                     /gene="rsxA"
                     /locus_tag="PXD69_001276"
     CDS             complement(18841..19422)
                     /gene="rsxA"
                     /locus_tag="PXD69_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HDL6283481.1"
                     /translation="MVDYILLVISTALINNFVLVKFLGLCPFMGVSKKVETAIGMGLA
                     TTFVLTVASLSAYLMETYLLEPLNAQFLRTLVFILVIAVIVQLTEMIVHKTSPTLYRL
                     LGIYLPLITTNCAVLGVALLNVNLANNLVESVLYGFGAAAGFSLVLVLFAALRERLAA
                     ADVPRPFQGASIALITAGLMSLAFMGFTGLVKL"
BASE COUNT         5651 a         4502 c         4138 g         5533 t
ORIGIN      
        1 tttctttcgc tgctttttcc gccgctaaac gttctgcttc cgctttctct ttagctgctt
       61 tttctgctgc taaacgttct gcttctgctt tctctttcgc tgccttgtct tttgctgctt
      121 tttctgctgc cgctttatcg gtttgttgct gagtagtttg cggtttagta ttcggttttg
      181 ccacattgtt tgagctactg cccgaaccac cactactaca cgccgttaaa cccaataaaa
      241 tcaaactggc taaagttact tttttgatag acataaaatg ttccttttgt aagataaaca
      301 aaaatagatg tgtataaaac acacgcatat tgtacaaaaa aaaaacaact cgtcatcaag
      361 tactttttaa gatttttttg ttaaatttct cctaaatatt ctacaatgtc agaggtctat
      421 atcagcttga atacaagcgg ttattttttc ttaaaatttt acaaaagggg cttattatgt
      481 ctgaaatctc aacgctcgca ccgcagctac tttggcagtg gtttgataaa gcctgtgcta
      541 ttccgcaccc gtcttaccac gaaaatgaac tggctgaatt tattgtgaat tgggcaaaat
      601 cgaaaaattt ctttgttgaa cgtgatgaag tgggtaatgt gttaatccgt aaaccggcaa
      661 ctaaaggtat ggaaaaccgc caaactgtcg ctctgcaagc ccatcttgat atggtgccac
      721 aagccaatac cggcacggtt cacgatttca ctaaagatcc gattcagcct tatattgacg
      781 gcgaatgggt aaaagccaaa ggcacaacat tgggggcaga taacggcatt ggattggctt
      841 cgtgcttggc ggtgttggat agcgatgatt tagcccaccc aaccattgaa gtgttgctca
      901 caatgaccga agaagccggt atggaagggg cgattggttt acgcccgaac tggctaaccg
      961 ccgatattat gattaacacc gacaccgaag aaaacgggga aatttacatc ggctgtgcag
     1021 gtggggaaaa tgtgaatgtg acactgccaa ttttcttggt gcctcatcag caagatagtg
     1081 cagtaaccgt tacgcttaaa ggcctaaacg gcgggcattc gggctgtgat attcacacca
     1141 cccgagcgaa tgcgattaaa gtgttcgccc gcattttgga acaagcccac aacgaagtgg
     1201 aattccaaat tgcagaaatt caaggcggtt cggtgcggaa tgccattcca cgagaagccc
     1261 acgcaacctt ggttttctct gcaaaaaatc agcaaaaatt aaccgcttgt ttaagccaaa
     1321 ccgccgaaca agtaaaagca gaactcaaaa ttgccgagcc aaacttccaa tttttaattg
     1381 aagaagctca actgcctgag caagcctttg accttgccag cactgctcga gtaatccatt
     1441 tcttaaatgt gatgccaaat ggtgtggtgc gtaatagcga tgtggtggaa aatgtggtgg
     1501 aaacctcact cagtattggt gtgcttaaca ccgaagcgag tgaggtgaaa gcgaccattc
     1561 ttgcccgctc attaattgag ggcggaaaag aggaaattcg cagtaaaatc cgctcattaa
     1621 ccgcattagt gggagcagaa gtggaatttt cgggcaacta cccgggctgg gagccaaacc
     1681 caaattccaa aatcacgcca ttaaccaaag cgatttatga tgaaatttta ggttatgaat
     1741 ctcaaattaa agtgattcac gcagggctag aatgtggctt aatcaacaaa atctacccga
     1801 atatggattt tgtctcgatt ggaccaacta ttctcaacgc ccattctccg gacgaaaaag
     1861 tgcatattcc ggcagtggag atttattgga aactcctaac caaactactt gaacaagcac
     1921 ctgagaaata aatttaatca aaaaaattat ataatcttgc cccgtaatta attgaataaa
     1981 acctcaatta attacggggt agctcttatt ttctctgttt taaaaaatgt accgtgaaag
     2041 cagcaattaa taagacgact gctgcaccta aataaagctc gttctttttc cagccggcgt
     2101 ctaataaaat acctgcaaga gttggggaaa caattgagcc taaacgccct acaccgatgg
     2161 cggtgcctac gcccgtgctg cggaaatccg gtgcgtatag ggttgggtta atggtataaa
     2221 gcccggtaat gcagccgtta attaatccgc caaccaaaat ggctagtgtt atcgcaagcc
     2281 ctaaattgcc ggcaaacaca aaggcaacca cagcagatgc agccagaata ctgaatgcct
     2341 gcaaaatatg ttttgccgcc cagcgactga ctaaaaagcc gaaaattaac gagccgattg
     2401 taccaccaac tgaaattgcc attcccacag tttggctttg ggttttaggc attccggctt
     2461 cttctaatag tgccggagtc caagagctga taaagtaaaa tgaggctgaa attgcaataa
     2521 aggcaagcca aattagcaac gtattgcggc gatattcagg ctcgaataaa cgggtaattg
     2581 ccactttgct tttacttttt gcctcaattt caggaagttc ccagccgttt cctaagccta
     2641 atttaacggc aatttgattt aaacgagctt tagcattcac cgggtgtttt gaaattaaaa
     2701 attccaccga ttcgggcaat acaaagaata ataaaacgaa taccgcaccg gttaaaatcg
     2761 acccaacgag gaaaaccgca cgccagccat attctccttg caataacacc gcagacattc
     2821 cgcccagcat tgcaccaatc ccaaagcctg aggcataaat tgcaatcgct aagccacgcc
     2881 atttttggct ggagtattca ctcactagca cattagtgcc ggttaaaatg gcggctacgc
     2941 ctaaaccggt taaaacacgc catacaccaa tttcaaacgc agaagtagcg aaataagtta
     3001 ggagcattcc taacgtggct aagcctgtgc cgattaaaag caacgggcgg cgaccaaatt
     3061 tatcagcaag tggtgaaaga aagagtgagc ctatcgccat accgaataaa ccggcactca
     3121 ttaagctgcc gatggctgca ccgtctaact gcaattcttc tcggatgctt ttggcggtaa
     3181 aggcgagtgc cattaaatca aagccgtcca gcatattaag taacaccgta agcccaacca
     3241 ctaaccattg gaatgaagtc attttgttat gagcaatttt ttgacgaata tccataagct
     3301 ccctctgcat caaaattgat aaaattttat ttagagtgaa ctatagaaag ttgattaaat
     3361 ataatcaaac tcaaaattta cataaaattt atgaaagatt ttcatattta atcaaaggag
     3421 ggaatttata gcaggaatgg cgagggagaa aatagatagg gcgaataatt attcacccct
     3481 agattgaata ggagaaagct atttcttctc cgcttgctca gccgctcttt tgcgtctgat
     3541 ttctttcgga tcagcaatta acgggcgata gatctcaatt ctgtcgcctt cttccaccgt
     3601 ttcattcagt tttgccgggc ggctaaaaat accgactttg ttttcacgca agtcaatttc
     3661 ggtatatttt tccaacacgc cggagagcaa aataatagtt tgaatggtcg cgttttgcgg
     3721 tacttgcagt tttttcagaa aatatttatc agggtaagca taaagcacct caacattaat
     3781 tttctgttct tcactttttt gttcttctgg attttgacgt tgttcagaca ccatacacct
     3841 cttttgcacg ttgtttgaaa gcatttacca tttttaaagt taattcgttg aacaccttgc
     3901 cgaacaccat tgctacaatt gggctggaaa attcaaaatt taattgcagg gcaattttgc
     3961 aactttgctc atcaaagggg gtgaatgtcc aagctccgtg taaatggcgg aaaggccctt
     4021 caattaatgc catctcgatt ttatagggcg gcgtcatttt attgtgggta ctgaaagttt
     4081 ggctaatgcc taatttctga atgtgtaact ctgcctttaa ttcattttcg ccggtgctaa
     4141 gggttttggt actcacgcag ccggataaaa attcggggta tttttcatac tgattaacaa
     4201 gttgatacat ttgctcggca ctataaggca cgagggcaga ttgattaacg attggcataa
     4261 tgtctctttt gggaattaac aagcggtcat attttagcgt aaatttgcaa gcctataaag
     4321 aaacgctttt gatttgaaga tagacctctt gctccggttg aatcgctaat tcattaaaag
     4381 accaaaggct gatcgtactc caaatttgct gattttcgac ttgaattgcc agatcaaccc
     4441 gatctaaatg cgtttctatt ttccgaacat tgccttttaa cacattacga attgagcttt
     4501 gagtcggttt ttgtaagctg attgaaacct ctttgctggc aatagttacc cttagcttct
     4561 cgcctatttg atggcggggg agttggttca cccataatcg ctgtgcgttc aagctcaagc
     4621 caagcatatt atagtgggga agtgtttctt ccaccggtaa ttcaagcagg ctaattcgct
     4681 gatgatttgg ctgccaagcg gaaaatgccg agctgtgcca aaccgctgaa agggtatcaa
     4741 atgcggttac tttgccgttt tccaacagca caagatgatc tgccaatcga actacttcct
     4801 ctaaactgtg gctgacatac agaatcggta tttcaagccg agcggataat ttatctaaat
     4861 agtccagtag ctcttgctta cgagggagat cgagggcaga taatggttcg tccatcagca
     4921 aaatattcgg tgagcttaat aacgcccgcc caatcgccac acgttgtttt tcgccaccgg
     4981 aaaggcttgc cggatagcga ttaagcaaag gggcaatgcc taacagttcc acaatttgca
     5041 aaaaatccgc agaatccgac cgcttgtagc catattttaa gtttttttcc accgaataat
     5101 gagggaaaag gcgatgctct tgaaacacat agccaatgtt gcgtttttca ggtggtaaat
     5161 tgatgccgtt ttggctgtca aacagcacct gaccgtttaa ttcgataaag ccggcttgag
     5221 cggttgaaag ccccgcaatt aaattaatca ggctggattt accggcaccg gaacgcccga
     5281 aaatagcggt gattccttta ttcggcaaat cgagattgac attgagcgtc agattgccga
     5341 gttgctgaag aagtttaagt ttgagcatag cgtttttgcc tttctgccag ccattccgaa
     5401 cagaacaggg caatgagtga aatcagaatc gccaccaagc acaaacgggc ggcagccatt
     5461 tcgccatcgg gggtttcaat aaaggtgaaa agggcggcag gaatggtttg ggtttggttg
     5521 ggaatgttgg agacaaaggt gatggttgcc ccaaactccc ccaaagagcg ggcaaaaccc
     5581 agcacgccac cggcaataat gcctgaaaaa gagagcggta aagtgagcgt gaaaaacact
     5641 tttaacggta ttgctccaag cgttctggcg gcttgctcca atttaggatc aactgcctca
     5701 aaggctaaac ggatagaacg caccattagc ggaaacgcca tcaccattga ggcaagcact
     5761 gctcctttcc acgaaaaact caagctgaaa tgaaaccatt cccacaaata ttgcccgatt
     5821 acccctcgtt tcgccatcga aataagcaat aaatagccaa tgacaaccgg cggtaacacc
     5881 agagggagat gcataatacc attgagcaga ttttttcccc aaaactgttt gcgggcaagc
     5941 agccacgcca cccacacggc aagcggtaat gcaagcacta cagcaatgga ggcaactttt
     6001 aggcttagaa caatcgcatt gagttcttgt ggggtgaaat taagcataat ctaaaactat
     6061 ttggttataa gcttaccctc gccccttgtg ggagagggat agatttttct tcgttcagaa
     6121 gaaaaatcag ggagaggggg aatattttaa acgctatttg ccctctctct gaaaaatatg
     6181 tctgaacgac atatttttct gtctctctcc cacaagggga gagagtaaat ttaatttaca
     6241 ggataaaacc cagctgcctc aaatttcgct tttgctttcg gggttttgag aaaatctaaa
     6301 aatgtggcgg cagaggcttt ttcactgact gccgcagcag ggtaaacaat ttcgccgtag
     6361 ctttccggtg ggaaaacggc aaccactttg actttattcg acactttagc atcggtggaa
     6421 tagacaatcc caagtgggga ttcgcctcgc tcgacaaaag agagggcatc tcgtacattt
     6481 tttgccctcg ctaaacgagg ttcaacactt tcccataatt ggtaatgact aagggctttt
     6541 ttggcatatt tgccggcagg aacgtggttt gggtctccca ccgataaata gctgtttgct
     6601 aattctttgg caaaatcgac cgcttgtatc gcttttggct caatgttact ttcggtaggt
     6661 gcaattaata ctaactcgtt tctgactaaa ttgcggcgat gtttaacttt ctcaggttgt
     6721 ttttcggcaa cataatccat ccacttttgg tcggcggaaa taaaaatatc tgccggtgca
     6781 tcttgctcaa tctgctttgc taataccgat gatgaagcga aggagaacgt gattttatcc
     6841 tgtggatagg ctttttcaaa atcctgctga atatcttgta acacatttgt cattgaagcg
     6901 gcagcaaaca cggtaatctc ttgtgaaaag gctgtgcctg ataacgttaa tgccattgta
     6961 attgctagtt tttttaatgc tttcattttc ataacctcac aattagttaa gaacgcagcc
     7021 caacccctcg ttgaattaag gaataggcaa taatatacaa gccgatgcaa agtgaagtaa
     7081 gcactgcaaa agtataacct aacggcacat cgctgatacc gagaaagcca tatcttaagc
     7141 cgttaatcat ataaacgatc gggttgaatt tagacaccgt ttgccaaaat tcaggcagta
     7201 atgaaataga gtaaaatacg ccgcctaagt aagttaaggg agtaagcaca aaggttggaa
     7261 tcagccccac atcatcaaag gagcgggcga acaccgcatt aattacgcca cctaacgcaa
     7321 aggcaatgat tgtcagcaac agggttaaga cgataatcgc aaccgagtag atttcaaacg
     7381 agacaaacac cattgccacg cacattacta aggttgcggc taaacctgca cgcaaaatac
     7441 tgccggtgac ataaccccaa ataatattat gggtagagag tggcgaaatc agcatctctt
     7501 caaaatctcg ggtaaattta ctcaagaaaa atgaagaggc ggtattcaca taagaggcgg
     7561 tgatggcggt catcataatt aagccgggtg caataaattg ggtgtaaccc acgccattca
     7621 tttccccgat tcgcccacca atcagcgtgc cgaagattaa aaaatagagc gtggtagtaa
     7681 tcaccggtgg cactaaagtt tgtcgccaaa tccgcaaaat gcggcggcac tctttgtaag
     7741 ctaaggtata aaatccgatt aaattcattt tactgagcca tattgataaa tagttcttcc
     7801 aagcggtttg atttgtttcg catacttagc acctcagccc cttgggcgga aatttgcgaa
     7861 aacagattgg ttagcccttg ctggcgtttt acattcactt caagggtgtt ttcatcaagc
     7921 catttatgcg ggtaattttg aatcacaagc ggttgatttt gctcagaatt ttgcaaatct
     7981 aacacaaata cctcactttc caatttggca agcaaggctt tcattgaggt gttttcaatt
     8041 aattcgccgt gttgaataat gccgatgtga cggcataggg tttccgcctc ttctaaatag
     8101 tgggtagtga gaataatagt tgtgccttga ttgtttagat cccgcaagaa atcccacaat
     8161 gagcggcgga gttcaatatc cacccctgcg gtaggttcat ctaaaatcag tagttttgga
     8221 ttgtgcatta aggctcgggc aatcatcacc cgacgtttca ttccaccaga aagctcacgg
     8281 gtgaggtggg tgcgtttttc ccataggtcg agcaatttca gccacttttc ggcacgtact
     8341 aaggcttcac tgcgaggaat gccgtaaaac ccggcttgtt gcactagcac atcaatcact
     8401 ttttcaaact gattgaaatt aaactcttgt ggcactaagc cgatttgatg ctttaattcg
     8461 actttttggg tgtctaaatc atagccaaac actttcacgc tgccgctggt tttatttacc
     8521 agtgagctga taatgccaat agtagtagat ttacctgccc cgttatgccc aagtagggca
     8581 tagaaatcac cttgctcgac cacaagatta atgcctttaa cggcttttac acctgttggg
     8641 taggttttta ccaaatcaat taattctaat gctttcattt gttttactca gtttccgcca
     8701 ccgctcgaat ggtcgattca tcaatttgtg catcaaaagc gttgcgaagt aacattaatt
     8761 tttcatcgtt aagcagagct gattttgctg cctcagttaa ttgtttgaaa atggctcgcc
     8821 gaatttcaag cggagtttgc tgttcgctat tgtcaccaat ggtcaattcg tatgaatagc
     8881 ctttttcggc aagggcagct tctaaatttt tacgtgattc cggattatct aagtgagcca
     8941 tattcggctt taacaccaat gcgaggtgct gttcattttg ttccgctaaa tagctattta
     9001 aggcgatctg acgggaaaat ccgcctaaat tgagtgagtt ggcgatgtca caccatttat
     9061 cctgctgaca agataaatga atggtttttg ccactaattc aggggtgcgt tcttgcaaaa
     9121 tcgcttgttt aatatcagaa ggtttggcac tgtctgcttg attttctaat tcaggattga
     9181 gccacgtcca gcgataatct tcatcttcca cacttttagg ggcggattcg gttttctttg
     9241 aaacttgcag tacggctttg tgctgatttt ccgccaagct gataaaccgc tcttgcaatg
     9301 aagcggtctg atttgccgat ttttttgcaa taacttgagg ggcttttagc tcaggctttt
     9361 ttttttcggt ttgagctaaa tttgcctgct gtgcttgtag ctttttgcgg gcttcgaggg
     9421 ctgccattgc cggtgaaaga gtcgcaggag cagacggcga aatagcggta tctactgcct
     9481 gtggcggttg agcaatgctt tcaaccgctg tggtagtatt ggcaacagta accgtttttt
     9541 gctgattttg ctcaaaattt tctcttagct ggctaatttg attttgtggt tttgctgtcg
     9601 taaccgctga aaccgaatgg tttggttgtg taaccttttc cactgcaact gttgctattt
     9661 tttctgcctg tttagggtgg aaagccaacg cacgcaaaat cgccatttca acaccggcac
     9721 gttgctccgg tgcaaaaggc aactcttttt tactgttgag gattaattga tagaaaaatt
     9781 gcacgtcttc gggcggaatt tgttttgcca gaaaatgcac taatgtttct tcggttgtag
     9841 gtgttttcac taattgcaac attgcaattt tgtgtaacac ttctgccaca tcgcttaata
     9901 attgttgcca atcaacgcct ttcgctgcaa tttgctcgat gatcgccatt gctttttcac
     9961 cgtcggcttg ggcggttgct tgcactaatt ctagtggttg attatcgtca atcaacccta
    10021 gcatttggct gactatcgca agcgtaatat tggcattact cattgcaatg gcttgatcgg
    10081 tgaggctgag agagtctcgg atactacctt gtgctgcttt tgccaacttt tctagtgcca
    10141 aaggctcaaa cggaatgttc tctgcattta gaataaattc aagatgacgg gcaatttgcg
    10201 attgctctaa tgcccgcaga tgaaattgca tacagcgaga gaggatcgta atcggcagtt
    10261 tttgcggatc agtggtagcc agcaagaatt tgacatattc aggcggctct tcaagggttt
    10321 ttagtaaggc gttgaaacta tgacgagaga gcatatgcac ttcgtcaatt aaataaacct
    10381 taaaacgccc aacggtgggt ttgtattgaa cgttatcaag tagctcacgg gtgtcttcca
    10441 ctttagtacg agaagcagca tcaatttcaa tgagatcgat aaaatgccct tcttcaatcg
    10501 ctttacaatt cgcacattca ccgcaaggct cggcggtgat cccgtttaca cagtttaagc
    10561 ctttggcgaa taaacgggca atagaggttt tacccacacc acgagtgcct gaaaacaggt
    10621 aagcgtggtg cagtctatct tctcttaagc tgttttcaag agcagataaa acgtgttgct
    10681 gaccaactac ttccgagaag cgttgcggtc tccatttacg ggctaaaact tgataactca
    10741 ttgatttttc tattcaattt ggaaatcaca agcggtcatc tttccgaaaa attttgcaaa
    10801 attttagcaa aaagccaccg cttgttcccc attaatgacc ttcaaagctg actaggctaa
    10861 aggatttaac cccttctttt tccaaacgct ctttaccacc taactcaggc agccaaatca
    10921 caaaggcagc gtgttctacg ttaccaccta agcgacgaat tagttttgca gttgcatcaa
    10981 tagtaccacc ggttgcgagt aaatcgtcga tgaccaatac attatcatta gcactcactg
    11041 cgtctttatg aatttctagc gtgtcttcac catattcaag cgtgtaagat tgcgaaatca
    11101 cttcacgtgg taattttttc ggtttacgaa ccaacacaaa aggcacgcct aacgctaatg
    11161 caacaggggc accaaaaata aacccgcgag attctgtgcc gacaatttta gtaatacctt
    11221 tgtctttaaa ttctgcaacg atggcatcaa tggtggcttg gaatgcagtt ggcacttcta
    11281 aaagtgaagt gatatcacgg aagataatcc ctgctttcgg ataatctgga atggatttga
    11341 tagaagattt aattaaatct aattggttca ttgtttgacc tacgtgtaat aaaaaaataa
    11401 ctggaaaact ctatagaaaa acagcagaaa tttcaaggag aaattgataa ccttacgttt
    11461 gatagtacag cttacttttc agtttccttt tccctatatt atagataaat atcttccctg
    11521 tttcgtctgg ttttaagcaa acgtaaaatc caaacatact gctcggggtt tttctccaca
    11581 aaatattcaa ttactcggtt catttctcgg gcggattgaa ttgggtctcc tgaaaattca
    11641 agcggtggca aaatttccat ttcatatttt gctttttccg cattataaat cgagaacatt
    11701 gggatcactt ccgcatttgc cactcttgcc attttattta agcccggcaa agtggctttt
    11761 tcggtggcaa aaaagtcggc atacacactt agctcttcgc cgaaatcttc atcgggcaga
    11821 aaataaccaa catcaccttt acgcacatcg gctaaaaacg ctttaatccc attttgacga
    11881 gtgtgcattc gcccacctaa acgctcacgg gtaatattcc acagccagtc caccaacgca
    11941 ttacggtgtg gattgtacat tgatgtcatc ggataaccga gcgagaacat cgccaccccc
    12001 gccatatcaa tcgaccaagt atgtggcact aacataatca cgtttttacc gctctctttg
    12061 gctttcacca cattttcaaa gccggtaaat tcacaccgtt tttgtaaata agaggccggg
    12121 cggattgcag tttcgccaat cgccaacatg gtttgtgcta ccgtgataaa cattttctcg
    12181 accacttctt cacgcttttt ctcactccaa tcgggaaaac agtaacgcaa attcacttta
    12241 gcacggtggt agcctttttt atttttctgc ttgagatagc gatacgccat cttacccaca
    12301 aaagcggata atttatccct aattcgcacc ggcacatagg ctaaaatcac taatcctaat
    12361 acacctaacc atacgcccca atatttcggg tgtagaaaag accataggaa tttgtgcgta
    12421 tagccgtctt gggcggtaat tcgtgtcatt ctataattcc tcattatttg tcactttctt
    12481 tgcttcgcca aagaaagtaa ccaaagaaag gcaaccctac ttcaccgcta tcttcgcttg
    12541 gtttgaattt gcttaacgaa aaaattccaa actcgccgct tcgctgctca aacaaggaat
    12601 ttttcctaca aattcaaagt cgttcgggcg gttcagaagg gaacccggca gagcatcatt
    12661 ttgcaaaatt ttccaaaaaa atcaccgctt gtatggtcgg atcgggttcc cttctgagtt
    12721 gcccgaacga cttgaaattt ttaggaaaat aactcgagcg agagcgaagc gaacatcagg
    12781 gttatttttc gttaagaaaa tttcaaccaa gtgaggatag caacaaagca gggtgtgctt
    12841 tcttttggtt acttttcttt gcacaagcaa agaaaagtga cataacacat catctcttat
    12901 caataatatt cttcaccgcc aatatcaccc caagtccaat aaaagccccc ggaggtaaaa
    12961 ttgccagtag taaacctgaa tcaatatgca atacatcaat gcgtagggct tttgcccaat
    13021 cgccaaggag tagatctaag cctgaaaaca gcgtgccgtt gccaataatt tcacgcaacg
    13081 cgcctagcac cacaaggcta aaagtcattc ccagccccat tgaaaagccg tcaaaagccg
    13141 agaatttgac ctcatttttt gaggcatagg cttctgctcg tccaatcacg atacagttgg
    13201 ttacaatcag cggaataaaa atcccgagcg attggtaaac agggaaagca aaagcattca
    13261 ttaaaagctg tactgccgtt accaccgttg caattaccat cacataaatc ggaatccgaa
    13321 tatcgtgtgg agtgattttc cgaaacaggg aaaccgtgat attggtgcaa attagcacaa
    13381 acattgttgc caagcctagt ccaagtgcat tggttacgct gtttgaaacc gccagtagtg
    13441 ggcaaagccc taataattgc accaaagcac cattattttt ccacacacca tcagcgaaaa
    13501 tcgttttcca aacgctggat tgtttcgggg caacgtcaat attcgtcaca gggatttgtt
    13561 gttctctttc catttctccc cctatttgca cgctttaaat tgattaaaca ttgtcgggtt
    13621 ttgagccagc tctgtcacca cccatttcgc actttggcgg atatgattga ccaccgcacg
    13681 aggtgtaata gttgcaccgg taaattggtc gaacttgccg ccatcttttt ttacattcca
    13741 atccgcttcg ttttctaaac taaaaagttg attggtaaaa gataagatcc aatccgacac
    13801 tcgggtctca attttatctc ccagccccgg agtttcttta tgctcaaggg tgcgaacgcc
    13861 taaaatgttg ccgttcggct caatccccat caatagcaca atatcgccgg aatagccgtc
    13921 cggagccgtt ccttgaacta ggtaagcggt cagattttcc gatttttttg caacataaat
    13981 acggttcaaa taaggggcat tttcgagctg aaccagtttg caagtcgcca acacatcatt
    14041 atcaaaatgg cttttcggca caacctcttc caataatttg cgttgttgca ttgcggttac
    14101 atcatcaatc ttgcctttgg taagcaggta cacaccggtt gaaacagcgg tgcaaagcaa
    14161 ggcaataaag cctaaaatta aggcgtaatt taaggtaatt tttgaggtgt tcattatctg
    14221 ttatccaatt ttgtgccgta taatctcggc tgcgtataat ggtcgattaa cggtacgcaa
    14281 atgtttgcca ataacactga aaatgcaatc gcatcagggt aatttccgta gtagcggatt
    14341 agataaacca ataatcccac caagccaccg aaaatcagtt ttcctcttgg ggtaatggag
    14401 gctgttaccg ggtcggtcgc aataaaaaat gccccgaaca tcatcgcacc gctaaagaaa
    14461 tggctcacaa aatgcaagtg cgattgttgg ctaaacagct cggtgaatcc actaaaaaag
    14521 gcaaaagttg ccaacattgc taccggaatt tgccaatgga taatccgttt ataaatcaac
    14581 accaaaccgc cgaataagaa cgcaaggttc agttgtagcc aaccggtcgc aaacagcccg
    14641 ttgaaaatcg gcgtattcat taccgcgtca aaacctgatt ttgcaaggct gcttttcata
    14701 ctatcaagcg gggtagcttg tgcaatgcca tcaacactat taactagctg atgaatacta
    14761 aaaccatcgc tagttacccc gtaaaaaatc aacgaaatcg catcacgaaa tgtcggtggt
    14821 tcacttaata actcaatcgg cactatccac gccgtcattt gcaccgggaa agaaaccaac
    14881 aacaacgcat agccaaccat tgccgggtta aatagattct gccccaagcc accataactg
    14941 tgttttgcca ataataacgc cacaatcacg ccaatcaaca caagccaata aggagcataa
    15001 ggcggaatcg acatcgccaa aatcaaggcg gttaaaatac ctgataagtc agccaaatag
    15061 aaagcggttg tttttttgcg taattttgca atcccgattt caatcacaat cgcaaggcta
    15121 acggcaagca acgtttgaat cagcacacca tagccgaaat aataaagctg aaccccaaaa
    15181 gcaggtaaca tcatcgcaat cacccacagc ataaaattcg cagtgagatt gctcgaatga
    15241 gtgtgggggg aactgaccat tttaaacatc tataaaacct ttttagtaaa aaattgcaaa
    15301 aaaatgaccg cttattaaag tctcggcaaa ttcaaattaa agcgtattgc cagcaggcgg
    15361 ataataatta cggtgaacac ggtggcaagg taaacccaat cgctttcgag cccaactgag
    15421 tttgcagcca caaaaatcac accaccgata aggctggcgg tcacatacac ttctttttgc
    15481 aaaatgatcg gcacttcgtt gcgtaaaata tcacggatta agccaccaaa acagcctgtc
    15541 acaccgccca gagccacaca gatcagtggg tgcaagccga aatccaagcc tttttgcacg
    15601 ccaatcacgg taaatacgcc aagcccgatg gcatcaaaca ccagcaagcc ggtttgccaa
    15661 cttttgcggg aaatttggtt gcggaaaata gcggtaatca ccactgcaag ggtaatcatc
    15721 agcacataga tcggttgttt catccaaaac accggcgtgg agccaatcat catatccctt
    15781 agcgtaccgc ccccgacccc ggtcacaaac gctaaaataa acataccgaa aatgtccatt
    15841 ttgtgctggc gggcagcaat tgcccccgaa atcgcaaaca cgatagtgcc gattaagtcc
    15901 tgaataaaca ggaacgacca cggcaatgcc ggaattagct cgctaaacat tgttgctttt
    15961 ctcctgctga gcggcttttt tcgctttagc tctggcgatg gcggccgcaa cggcggcttt
    16021 gcgtgggtct tcgctttccg ttttgggcga atggttattc gcccctacag atttatccga
    16081 tgtagtttcg ttcattgatt gtaggggcaa atcattattt accccaatca cagcattggc
    16141 aatatcttcc ggtttttcga ccgcttgttg agcttgtttt ttcgctttag ctctagcgat
    16201 agctgctgca acggcggctt tgcgtgggtc ttcgctttct gtttcgggcg aatggttatt
    16261 cgcccctaca gatttatccg ataccgtttc gttcattgat tgtaggggca aatcattatt
    16321 taccccaatc acggcattgg taatattttc tgatttttcg accgcttgct gtgcctgttt
    16381 tttggctttg gctcgggcaa gggcagccgc aacggcggct ttgcgtgggt cttcgctttc
    16441 tgcttcgggc gaatagttat tcgcccctac agatttatcc gatgcagttt cgttcattga
    16501 ttgtagaggc aaatcattat ttgccccaat caaggcattt gtaacatttt ccgatttttc
    16561 gaccgcttgt tctgcctgtt tggctaaacg tctggctctg cgttgtgcca ttaaatcgct
    16621 gttatcaggc tcgccgttag gttttacctg tacttctgcc ggtatttctt ggactgtttc
    16681 aaccgctttt ttcgctttca ggcgttcaag agccgctttt acaggatcaa caccacctgc
    16741 atttgccact tcttcacggc gtttttccgc cgcttggcta atgcgagcag ttctggcatc
    16801 tcgttctttt tgtaagcgag cttctctcgc ctcaaagcgg attttagcct cttccgcttt
    16861 gcgggctttt tcctcaattt cctcgatttt tgctttttct tggcggaaat attggattaa
    16921 cggaatgtag cttgggcaaa cgtaagcaca aacgccacac tcaatgcagg catctaaatg
    16981 gtattctttc gatttatcgt gatcttctgc acgggcaaac caataaagtt gctgtggcaa
    17041 taaccccacc gggcaagcat cggaacagct tgaacagcgg atacaactac gctccggttc
    17101 aggtggtgca tattcaaaat gatcaggggc aatcaagcag ttcgcagttt tggtaatcgg
    17161 ggcttgcaat gcaggcaaaa taaagcccat catcggtccg cctaaaaaca ccggaaagcg
    17221 tttatcggct tgataatcta cctgctccaa caagtgctga attggcgtgc ctaatcttgc
    17281 ccacacgttc cccttgttgc gaattttatc gcctgtcagc gtcactaccc gttcaatcaa
    17341 aggttcatca tcaataattg cccgtttaac cgcaaacgcc gtgccgacat tgtgcatcac
    17401 aatgcccatt tcaatagtgc gtttgccagc cggaatctca agtccggtca acacttgaat
    17461 cagctgatca gaagctccgg agggatattt agtcgggatc gcccgcacaa acatatcgtt
    17521 cgagcctttt aaagcggttt ctaaagcttg aatagcgtgc ggtttgttgt cttcaatcgc
    17581 aatcaccact tcttccgggc gaagcacata acgcagaatg cgaatacctt cgataagatc
    17641 cgcagtgaaa tcttgcatta agcgatcgtc acaggtgatg taaggctcac attctgcccc
    17701 gttaatcacc agtaatttac agcgtttatc cgccaaactt aattttgttg cggttgggaa
    17761 taccgcaccg cctaaaccgg caatgccata ttggtaaact ttttggataa tttgatcgct
    17821 tgttaggctt aaaaaatcct caatcggctg gcgttccacc catttatctt taccatcggt
    17881 ttcaataatc accgttattt cgggcaaacc tgaggcgtga gcggaaacat aaggctcaat
    17941 cccaatcacc cgcccggagg ttgggctgtg tacgggcagt tgacggaagt gatcgccttt
    18001 cgtgagcggc tgccctttca ataccacatc gccgactttg actaataatt cccctgccca
    18061 gccagaatgt tgaaccagtg gcacatagaa aaacttcggt aaatttaagg tgcgaattgg
    18121 cttgctgttt gattgggatt tattttccat cgggtgaata ccgcccggga aatcccacag
    18181 tttacccgtt tctttatttt ggcggattcg ctcaatcact aaattaggat tgctcatttt
    18241 tgcctccgcc ggtaactaat tttctctgca attcagtggt attcacaatc ggaataatta
    18301 aatcttggtc aaatttccag ttccaagatt gggttgtcgg tttaattggt cgcatttcaa
    18361 tacagttggt cgggcaaggg gcgacacaaa gttcacagcc ggtgcaaaga tccggaataa
    18421 tggtgtgcat tgctttattc gtgccgataa tcgcatcaac cgggcaagcc tgaatgcact
    18481 tagtacagcc aatgcagaga tcttcaatca caaaagccac tttcatctca ggctctgcca
    18541 taccttccat tggcggcact tctaccccaa gcaattcggc aagattcacc actaaaggtt
    18601 gtccacccgg cacacattta gtgatcacat caccattagc aatcgcctca gcataaggct
    18661 tacagcccgg gtagccacat tgaccgcatt ggctttgtgg taaaagggca tcaatttgat
    18721 cgacaatcgg gtcggattca actttcagtt taatcgagga atagcctaaa accgccccga
    18781 aaatcagtgc gatcacagca atagcgataa gaatataagc gataattggc aaatcaagca
    18841 ttagagtttc accaatcctg taaagcccat aaaggcaagc gacatcaagc ctgcggtaat
    18901 cagagcaatt gatgctcctt ggaacggacg aggcacatca gcggcagcca aacgctcacg
    18961 cagagccgca aataaaacta acaccagcga gaaaccggca gcggctccaa aaccataaag
    19021 aacagattcc accaagttat tggctaaatt cacgtttaat aatgccaccc ctaatacggc
    19081 acagttggtg gtaatcagcg gtaaatagat cccaagcaag cgataaagtg tcgggctggt
    19141 tttatgcaca atcatttccg ttaattgcac gatcaccgca atcactaaaa taaacaccaa
    19201 ggtacgcaaa aattgagcgt ttaacggctc aagcaaatag gtttccatca aataagcaga
    19261 gagcgaggca accgtcagca caaaggttgt cgccaacccc ataccaatag cagtttccac
    19321 ctttttcgac actcccataa acggacaaag ccctagaaat ttaactaaga caaagttatt
    19381 aataagggcg gtgctgatga ccaacagaat ataatcgacc ataaattcca caaaattaaa
    19441 tatacaagcg gtcaaaaacg cattttattt tgcaaaaaac agagaaaatc tgaccgtttg
    19501 ttaaagcatc tcattaaaaa taaacgttat attatctctt gttttcggct cattcacaat
    19561 aagaaatcgg aggtacttct agtaaacata ccatatcaaa tatgatcttg ttacctttgt
    19621 ttctatctct ggtagaatgg agaatgtggg gactaagcta tacagcatga aaggtgaaag
    19681 gagcttgatt ttctaagtta atcctaaaaa gtctcactcc tttgatatag aggatattag
    19741 aataacaacc aattaattac tcgataaata aacataataa tcccaaatat aatgaaaaca
    19801 taataaatct ttttccataa aggg
//
LOCUS       DANLXO010000043        19812 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.043, whole genome shotgun sequence.
ACCESSION   DANLXO010000043 DANLXO010000000
VERSION     DANLXO010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19812
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.043"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1076)
                     /locus_tag="PXD69_001277"
     CDS             complement(<1..1076)
                     /locus_tag="PXD69_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraC family protein"
                     /protein_id="HDL6283482.1"
                     /translation="MMSFLSEVFSSFKPTKAGVISSEPNENTGESDIIQNKMSEVNNE
                     VQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLNEHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDINPYVVQFYCQDSDDLQPYIEQLRNYIS
                     PIAQNSAFSEEWLRVQAKHFKDIGKPEGLFIDDRVTNTAWSGRIRSTKMVIYRYVDKS
                     NDSNENLIIEQLNNACSRINGALTTAGLQLQRLDGEQIRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDDQPHEVVVVNNLRK
                     QPEVGLMTGEITRGRNINALFDLLP"
     gene            complement(1076..1474)
                     /locus_tag="PXD69_001278"
     CDS             complement(1076..1474)
                     /locus_tag="PXD69_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL6283483.1"
                     /translation="MKHLFCIMISALLITGCTTSTEELLPTNGSTMRDIWDKGASNND
                     LHLYRSQQGRTLDPVDYIPNSEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            complement(1487..2941)
                     /locus_tag="PXD69_001279"
     CDS             complement(1487..2941)
                     /locus_tag="PXD69_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283484.1"
                     /translation="MKANKALFVILGIVFILVGGIVYALFGRSESVPQPTQQEILDIS
                     IKDLTPEQVRTMGIQGDTPIDTLRTLVTTVKSNERRMDELIDENRQLKQKEDLVNGRI
                     NDAVNNETRKLQEQIADLKMQLFDMATLVNNKPTTQESTPQVEAQPNTVPNKGFGTAG
                     DKLPIGGATMSNVDTSGMYWVEPSDQISLDASGKPVSGNTVATKFGFPKDFNGGQSAG
                     NNEKKGLPFFPETDTVTSSQGTAGNARGKNQMTSVYTIPSNSTFLDSVAMTGLIGRIP
                     IDNRVSDAYPFKVLIGRENLIANGIELPDVDGAIVSGTATGDWTLSCVRGSVKSMTFV
                     FNDGRIVSTSNKGNGEEIGWLSDSSGIPCVPGERKTNAPEYLGTNFFLAAASAAAQGF
                     SQSQTTTVVDGSSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENFDAVYVPPG
                     HRVSIHIEKEIEIDYNAQGRKVKYGSKSTNSQLD"
     gene            complement(2953..3837)
                     /locus_tag="PXD69_001280"
     CDS             complement(2953..3837)
                     /locus_tag="PXD69_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03749 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283485.1"
                     /translation="MKRLPILLVSLLIGFSGSSLADVLMKWERKPLPVALQVEKERII
                     FVDKNVKVGYPAELDGKLRIQSTGGAVYLKALETFPSTRIEFRDVTTGEIFLFDLTAA
                     SKVANPEEAIRVVFDGTVEKQSFSSNRDDESSDLPIANSRPQLPVPAALTRYAAQSLY
                     APLRTVEPLDGVRRVAHRLPKKITKLLPAYSIEATPLISWQLDEYVVTAIRLQNKGNT
                     QITLDPRELQGQFYAATFQHNWLGGYGENEDTTTLYLVTEGYANNALIPETRPVKLVS
                     KKVKRTTKVETKPAQSAK"
     gene            complement(3837..4481)
                     /locus_tag="PXD69_001281"
     CDS             complement(3837..4481)
                     /locus_tag="PXD69_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03746 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283486.1"
                     /translation="MSQLKSQLHEKDKHIKTTRIFAFLFFIIILVLAGVIYTFPSRLT
                     IYNPPDLRAGSQRAWWEIPKPTIYAFSYQIFQQMNRWMTNGEEDYEKNITTLKPFLTP
                     HCEAFLRQDYKDRLRNNELRSRTRMVYEITGRGYSEDKVTIFSEDSWAVNLDLSVDEH
                     FQGQPVKRVYIRFPISIVRMDVDSAQNPWGLGFNCYHSIPKLLEGVEPKTEEKK"
     gene            complement(4485..4850)
                     /locus_tag="PXD69_001282"
     CDS             complement(4485..4850)
                     /locus_tag="PXD69_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03750 family conjugal transfer protein"
                     /protein_id="HDL6283487.1"
                     /translation="MSEQDTTIPFLPTRLNREATVYGGMTVSEFGISAGLGFMLGLIV
                     GLFLWILTDFWLLIPAMAMLLCIATVLIGKGIVAAVKRGKPEAYLNRLVEKKMDDLFN
                     GHKFIKREGFWSIRRYRRK"
     gene            complement(4873..5262)
                     /locus_tag="PXD69_001283"
     CDS             complement(4873..5262)
                     /locus_tag="PXD69_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2976 domain-containing protein"
                     /protein_id="HDL6283488.1"
                     /translation="MNRIKSLTKHLHSRYLAVMLFFWGSLQNAFAAGPDASKIPDFQI
                     PGVDSNTKDPMEIIWIVLKGLVTLGAVILAAVAILTVVKALIGIYNEATSENGKKGWG
                     HFILALIIGFIVIFFCLWLVKLAVGLF"
     gene            complement(5277..5510)
                     /locus_tag="PXD69_001284"
     CDS             complement(5277..5510)
                     /locus_tag="PXD69_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03758 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283489.1"
                     /translation="MSYSPANAFSVASGIDPFRLKIMIAIIFLSLLLLAVAWALNSGY
                     KGFSFRDKSPFSLLVLFLKGVALLACVTYFFIY"
     gene            complement(5510..5836)
                     /locus_tag="PXD69_001285"
     CDS             complement(5510..5836)
                     /locus_tag="PXD69_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAQPRD family integrative conjugative element
                     protein"
                     /protein_id="HDL6283490.1"
                     /translation="MSISTSLRKGIVVLVTLSCLPALASTEQEQLAQAIKQLEAAKLS
                     LQRAEKVAKASPKTREYFNYSAIHSDIETVKKGIQQYINPSRALPRDPNVLRTLSDDY
                     SKLRGQ"
     gene            6023..6406
                     /locus_tag="PXD69_001286"
     CDS             6023..6406
                     /locus_tag="PXD69_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283491.1"
                     /translation="MRYQMRYLALFLVVFPYVAHSLPSAQKVGNICHAENAQYNYGGL
                     WELSLRGKLICNYWQFLGDDERKKIELQLDEYGEFPIWNTSEQISEQIIEDDEYPQYW
                     EVEDWEDSDWDTESENEDTEATTEE"
     gene            complement(6438..7133)
                     /locus_tag="PXD69_001287"
     CDS             complement(6438..7133)
                     /locus_tag="PXD69_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03747 family integrating conjugative element
                     membrane protein"
                     /protein_id="HDL6283492.1"
                     /translation="MSEETKARRKSGLINLIFGKINMSLAAIAVSLIFSIILEWIGIA
                     FWWPQEGHLHSQTMMLNEMQWLSDDFSQSLFAKSSTAFATSIIENVYNWLFVYTGVKE
                     WLTSPGNGSMEQWVHHYGRAYIESVIYVVITFIIRLIIIVFTSPLFLLTALSGLTEGL
                     SLRDIRKFGAGRESAYLYHHARRYIMPMMVTAWVLYLSIPFSIHPNIILVPAACLFGL
                     SICITAASFKKFL"
     gene            complement(7130..7483)
                     /locus_tag="PXD69_001288"
     CDS             complement(7130..7483)
                     /locus_tag="PXD69_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6283493.1"
                     /translation="MSSAKMREEKRTNLLDLPNKYRNFNGEFSASCGLDNAEELLIHS
                     QSYFIEWFEQGYSFHQFAEKFADQGLSLWSADEVSMRHSDKSKDIFAFYLAFDNNPSG
                     YILVQCQLDREDSLQ"
     gene            complement(7476..9677)
                     /gene="traD"
                     /locus_tag="PXD69_001289"
     CDS             complement(7476..9677)
                     /gene="traD"
                     /locus_tag="PXD69_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HDL6283494.1"
                     /translation="MSAKHTLEAWLRPPVEFFPAAVHASCAFVSAAAPWSLALHPSIG
                     YSIAAGFGALSFYRAKQGWQIVRYHRNLKRLPNYSMTSKQIPVSNKYLFVGKGFEWKP
                     IHTQRLHDCFSDNGSKYLEPSKLFKMAREYEKRHENWLTHLTSKDSRWNLVRPLPPVE
                     GIPAIHGIEPDEVDVVQSVSSRVGHTVVFGTTRVGKTRLAEVFVTQDIHRGKTADERE
                     VVVFFDPKGDADMLKRMYAEAKRAGREDEFYVFHLGYPEISARYNPVGRFNRISEVAG
                     RISGQLSGAGNSAAFKEFAWRFVNIVARALVELGNRPNYVQISQFVQNIDSLFLDYAE
                     KFIRKTDPKIWENLATIAAGLDEKALPFGMKDRPLIFVINKYIAESAVFDPILQGLAS
                     AVRYDRTYFDKIVASLLPLLEKLTTGKISELLSPDYADILDERPIFDWESIIRKRGIV
                     YIGLDALSDATVAAAVGNSMFADLVSMAGHLYKFGTNDGLPGAFKEKSKPVKINLHCD
                     EFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGSKPKAGQTLGNFNTLYMLR
                     VKEPATAELLTKQLHEVTIKRSTVTSSTTDSSNPDDDKAFSSNTGQRISESTVPMLVP
                     ANITNLPKGQAFALMDGSKLWKIRMPLPAVDKDDMMHQSLRELTDYMRKNYHVVENWW
                     QPAFTEYTPSRDIAEAFEAMSEPQYKTQIDHQVDNFGIDEPYDIDEEENDE"
     gene            complement(9677..10183)
                     /locus_tag="PXD69_001290"
     CDS             complement(9677..10183)
                     /locus_tag="PXD69_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL6283495.1"
                     /translation="MQNKVKVLLFSLYVSHFSWADLTVIADFGGESAVRFYESLQPEH
                     DENAPNYPNSISASVSEADILPIVSHKLSPGTIKEKPFDLTGMQAIFLIGADNTSAQW
                     LQQNREKLITLNATGLVVNVQTLSELNQLRDIVPELRILPTPGDDLAERIGIAHYPVL
                     ITESGVSQ"
     gene            complement(10186..10956)
                     /locus_tag="PXD69_001291"
     CDS             complement(10186..10956)
                     /locus_tag="PXD69_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HDL6283496.1"
                     /translation="MDITRVLVIVAVFLSNISISQAKPFNGFGSEIDSYIRMAAQRYQ
                     VSEAMLRGFVKMEDGWYGNISPTGATGVGQFTMGTWNWLSETERGKQLGMKLITAKNR
                     GSYADPRRDKYTNTLATALLARWHIEQFQLRNIPITDENLYMAHNIGLDGLHRAMMGK
                     ATKEDILNMRRNGMKSWMTVRDFLNYQKGRFLAHKQEANFMTVSKQGHIHTGVAAFVY
                     PTSQMGKSVKWVEPDNKMIWVEPKNAMVWVEPQNTLQR"
     gene            complement(10935..11708)
                     /locus_tag="PXD69_001292"
     CDS             complement(10935..11708)
                     /locus_tag="PXD69_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03759 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283497.1"
                     /translation="MREISMKFNLCRKAIPLAVLPLLLSFALPTLAQNMQTETVSSSQ
                     STLQKQSQHQQSQLSDSLKQAKEWGLTVEEWSRYTELMKGERGMWSPNLDPLTALGIE
                     ARTAEEREKYARMLAKKYYERVSKELDFDKVYRQEFEKLYPNELPFEVEPHISQSVGR
                     VVYFTRFDNCDSCKSDLGKILSYANNQTPLDIYIVGQNISDNDIRKWAADNNIDPIKV
                     SKRLITLNHDKGYWLRYSLGKMPAAYQIKQDGEWTSLVY"
     gene            complement(11708..12337)
                     /locus_tag="PXD69_001293"
     CDS             complement(11708..12337)
                     /locus_tag="PXD69_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283498.1"
                     /translation="MKTKISLMTVFMLGLSGCVHQQDTAQNSDEITPMPDSLLTPQMQ
                     QLPPQDRIVSKDIYQEQTTSNTEVVRDGRYTLISIAPEEGQKYLLEQVVSVKVSNPKN
                     RFTANVQQGLRSTLTNTGLDLCYPPIGEQGNAVQTLFTRPLPKVHYQFGPMKLYEALQ
                     MIAGPAYELTLNDISRTICFKARESSFQNPHKPAVAVTTTTIKTEVIEE"
     gene            complement(12496..12756)
                     /locus_tag="PXD69_001294"
     CDS             complement(12496..12756)
                     /locus_tag="PXD69_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283499.1"
                     /translation="MTFELGRVCTTRAVAECFNQNALVELLNRYCYGDWGNLCEEDKL
                     ANQEAMKYGGRIVARYDVDDESLYIITEADRSCTTILFSYEY"
     gene            complement(12869..13231)
                     /locus_tag="PXD69_001295"
     CDS             complement(12869..13231)
                     /locus_tag="PXD69_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283500.1"
                     /translation="MEDSFFDFDDISCYLGQWEAILEEYSDIVSIEDFWLVAKEFETV
                     PHFGNLYQELVISRLIQRFCTELDIEQDSDLVEFDYYINAIDTHFYINRQRICDIDDW
                     NEMLDKIRKEMTPAKLAA"
     gene            complement(13311..13718)
                     /locus_tag="PXD69_001296"
     CDS             complement(13311..13718)
                     /locus_tag="PXD69_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL6283501.1"
                     /translation="MNRQGIYINGKQVFDSKGKEINSVQIINSTVQTVVGINKGYISM
                     AAGNNVLIVDGQTIALEPSPTINIEVFGNVTNLNAGSENVRVTGDAKSVSTVSGDVTV
                     DGNVTSNVKTVSADIHCKSILGKINTVSGDIYR"
     gene            complement(13744..14424)
                     /locus_tag="PXD69_001297"
     CDS             complement(13744..14424)
                     /locus_tag="PXD69_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283502.1"
                     /translation="MNSLQQFVKTLSPTVLNGRHFDGIVGDVVFVQNGYGKWLDQGFT
                     IIGFDKSIEEKDWIYLDWDCYWFGKNPAQVIPEKSWAQRSWLARAYSISLERFNSLGL
                     EREYNIVSDWDNPIYGTDIQLIEHSKEFFRWTEADDRGIFLVHNEMAFHFFKKEIKAS
                     SEPEYYQPIETFWKDATVVLNIEDLDMLERVGLEQTNTPALAKLTTFVQAARNEISNG
                     NIVFYRAF"
     gene            complement(14530..14961)
                     /locus_tag="PXD69_001298"
     CDS             complement(14530..14961)
                     /locus_tag="PXD69_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL6283503.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEHKKGNPFYACRVAAL
                     VGESDSPEYRYFDMNVVGKETETLIKKCQKAVSEEKKVLVSFVMADLWFDTFTYSSDS
                     KYHKKGDTGVSLKGRLIRIKMIKIDGEIVYQEKPKADEQSE"
     gene            15581..15718
                     /locus_tag="PXD69_001299"
     CDS             15581..15718
                     /locus_tag="PXD69_001299"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283504.1"
                     /translation="MTLQSRFRQLQQTNVAGIIHLMFSWHSHKVEFPLRMLGDILAGV
                     D"
     gene            complement(15779..17830)
                     /locus_tag="PXD69_001300"
     CDS             complement(15779..17830)
                     /locus_tag="PXD69_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL6283505.1"
                     /translation="MKLFICEKPSQARDLAGVLGATSKGEGLLATADKSIIVTWGFGH
                     LVEQYQPEDYDEAWKRWAFETLPIIPAQWKMTPKKESKKQYSVVIGLIKKATSVVIAT
                     DADREGEMIARELLDLAGYRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMG
                     RSRSDWLIGMNFSRLFTLMAQAKGYSGKPLSVGRVQSPTLTLVVNRDREIANFVPKSH
                     YALAVQLTTTSGETFVAGLAVPEQYLDESGLCLDSRVIQQAEAQIKQTGLAKVVTVET
                     KREKKSPPLLYALSDLQGECNRLFGFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPES
                     QFSDVPNVIRSLVASDSGLQTLLPKLNLRQKSRAWDDKKITAHHGIIPTIKKADLSKL
                     SEEEMKVYDLIRRRYLAQFLPHLEMDKTVATLQSSGHTLVARGNVIVAQGWRILFGKN
                     VDEETGNDDEKQGLPVLTKNQQCNVTHSEVRTLQTKPPAHYTEGTLLDAMKNAARFVT
                     DPRLKQRLRETEGLGTEATRAGLIQGLIDKGFLLKKKKSLVASAEAVALIDSLPDLLK
                     NPGLTALWEQALNQIAEGSMTLDAFMQKQEAFVKQLIGSCMQQGMSLGNIEIRKCSEC
                     GKPMRKINHAKGTFWGCTGYPDCQHKEADKKVKSASNKSAKKSSNLNVLDQLNKLRSQ
                     L"
     gene            complement(17990..18508)
                     /locus_tag="PXD69_001301"
     CDS             complement(17990..18508)
                     /locus_tag="PXD69_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6283506.1"
                     /translation="MRYIKYSLFLVSTMLISGCAELSAINDKVGDWAGQMNQTLYGSK
                     DGSVEQHNGRQVYTKTRNGKYVYQDSGTLQLKRNIDDVFLKVRREFGFRPTNADSDSR
                     KVYHTVQGTFYHVSGYFESDVDTDGVHLGENYLEVIIEKGSKNQVNVEWKATGSARWL
                     DSAKQRLLNTLK"
     gene            18985..19695
                     /locus_tag="PXD69_001302"
     CDS             18985..19695
                     /locus_tag="PXD69_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283507.1"
                     /translation="MWKKIRIDFTDTVKCQFCSRMITSGKAIVVQNELGNISFSGPSC
                     AQNKNGQNVVNPKEKIVDITKGCLLHEPTTNDKTDKQVDVEQDNFTSIHDDEVHNYLD
                     NNAVNAYLTLRFEKLSHLTSIIKSQKLNEIYHNYELTGQISQKDESYIRVIMYGEAYP
                     LYTYQNLQAVYAAEYWLQSFIQHNPENDLNFIQDTLNQLRRKLTLTEKQIMGINNWFK
                     NSDGKMVKLKTNAFVRGK"
BASE COUNT         5890 a         4052 c         3763 g         6107 t
ORIGIN      
        1 ggcaataggt caaataacgc attaatatta cgcccacgag taatctcgcc ggtcattaag
       61 cccacttctg gttgttttct taaattattg actacaacaa cttcgtgcgg ttggtcatca
      121 aaataccaat agttgccttc atttttcggt tgagaataaa ataaatcttc actgaaatcg
      181 ttaaacgcta attctggaag cccgtcattt gaggtttgtt tgccaaaaag atggtaacaa
      241 tcattgttgc ttaatccctc aaaattaata gatggattag gattaaacca acgcaataac
      301 cattggcgaa tttgttcacc atctagccgc tgtaactgta atccagccgt tgttagagcc
      361 ccattgattc gggaacaagc attattaagc tgctcaataa taagattttc attggaatca
      421 ttggacttat ctacatatcg ataaatcacc attttggtac tccgaatacg tccagaccaa
      481 gctgtatttg tcactctgtc atcaataaaa agcccttctg gtttaccaat atccttgaaa
      541 tgcttggctt gtactcgtaa ccattcttcg ctaaatgcac tattttgggc aataggcgag
      601 atataattcc gtagctgttc aatataaggc tgtaaatcat cgctatcttg gcaataaaat
      661 tgcacgacgt aaggatttat atccagctca tcaaagctat cttgtaaggc atctttgaca
      721 agattacgta tccgacttaa aaattcaata ctacggccag cagtaccaat cggcttaata
      781 tcaaatactg ccccaacact acgggcatca tcaaggagta tcacaccgtg ctcattcaaa
      841 tattctcccc aaggtagatg atcgataaag gagggctctt gtgagtataa ccgacggtga
      901 tgctgtgact gggtgagttt tccactgcgt tttaattgtt gaacctcgtt atttacctca
      961 ctcattttat tttgaatgat gtcagactca ccggtatttt catttggttc acttgatata
     1021 acccctgctt tagtcggttt gaaagaggaa aatacctcac ttaaaaaaga catgattaaa
     1081 gccctcttgt tctatcaccc ggctgagcat attgaactcg tccatagaaa ggtagtactg
     1141 tagaatatcc tggaatactg agaggctctc cggaacgagt ttgatgtggg tacacataca
     1201 taatcagatc cggattaggt aaacgaggga acaagttatt aatttcattt tctgccgtac
     1261 gggtataggc tcgttgctca ctattaggaa tataatcgac agggtcaagt gttcgccctt
     1321 gttgtgaacg gtataagtgt agatcgttat tactcgctcc tttatcccaa atatcccgca
     1381 tcgtactgcc gttagtaggt aataattctt ctgttgatgt tgtgcaacct gttatcaata
     1441 aggcacttat cattatgcaa aataaatgtt tcatcgtttg ttccttctaa tccagttgtg
     1501 aattcgttga ttttgagcca tatttcactt tacgaccttg ggcgttgtaa tcgatttcaa
     1561 tctctttctc gatatgaata gagacacgat gacccggtgg cacatataca gcatcaaagt
     1621 tttcagcaaa acgttttcta aaccagtcag cagattcttt taagccgcct ccgatagctt
     1681 gtcctaagat gaacttaccc tgatcgccgg taacagctcc aacaacacta cttccatcaa
     1741 caacagtggt tgtttgtgac tgtgagaatc cttgggcagc agcacttgca gcagccaaaa
     1801 agaaattcgt tcccaaatat tctggggcat tggttttccg ctctcctgga acacaaggga
     1861 tacccgaact atctgataac cagccaatct cttcgccatt ccctttatta gaggtactca
     1921 caatacgtcc atcattgaac acaaaagtca tactttttac actgcctcta acacaggata
     1981 gtgtccagtc gccagtagca gtacctgata caattgctcc gtctacatca ggtaattcaa
     2041 taccattagc aatgagattt tctcgaccaa taagtacttt gaacggataa gcatccgata
     2101 ctcgattatc aatcgggata cgtccgatga gtcccgtcat tgcaactgaa tcaaggaatg
     2161 ttgaattact tggtatggta tatactgatg tcatctggtt tttaccacgt gcgtttccag
     2221 ccgttccttg tgagcttgtc acagtatctg tttccgggaa aaacggcaga cctttctttt
     2281 cgttatttcc tgcagattgt cctccattaa aatctttcgg aaagccaaat ttagttgcta
     2341 ctgtattgcc tgacacaggt tttccacttg catccaaact aatctgatcg cttggttcta
     2401 cccaatacat tccactggta tccacgttgg acatagttgc accaccgata ggtaatttat
     2461 ctcctgctgt tccaaatcct ttattcggta ccgtattagg ctgagcctct acctgagggg
     2521 tagactcttg tgttgttggt ttgttattaa cgagagtcgc catatcaaat aattgcattt
     2581 tcaaatctgc aatctgctct tgcagttttc gggtttcatt atttaccgca tcattgatac
     2641 gaccattcac taaatcttct ttctgtttga gttggcgatt ttcatcaatt aactcatcca
     2701 tacgacgctc attggattta acggttgtca caagggtacg cagcgtatca atcggcgtat
     2761 caccttgaat acccattgtt ctgacttgtt caggtgttaa atctttaatg gaaatatcta
     2821 aaatttcctg ttgtgtcggt tgtggaactg actcactacg tccaaataag gcatagacaa
     2881 ttccaccgac taagataaat acaatgccca gtatgacaaa taaggcttta ttcgctttca
     2941 ttgcctttcc tcctacttcg ccgattgagc cggtttagtt tcaacttttg ttgttctttt
     3001 cactttttta ctgactagtt tgactggacg ggtttccgga attaatgcgt tattagcata
     3061 gccttcggtc actaaataca gggttgtggt atcttcattt tctccgtacc ccccaagcca
     3121 attatgctgg aaagtcgctg cataaaattg tccttgaagc tctcgagggt caagcgtaat
     3181 ttgagtgtta cccttatttt gcaaacgaat agcggtaact acatattcgt ctaactgcca
     3241 gctaattaaa ggtgttgctt ctattgaata agccggtagc agcttggtaa tttttttagg
     3301 tagacgatgt gccacacgac gcacaccatc taaaggttca actgtacgta gtggagcata
     3361 aagtgattgt gctgcataac gggtcaatgc ggcaggtact ggaagctgag gacggctatt
     3421 cgcaataggc agatcagagc tttcatcatc tctattgctt gaaaaagatt gtttttctac
     3481 cgtaccgtca aaaaccactc gaattgcctc ttcaggatta gcgactttcg aagctgctgt
     3541 taaatcaaat agaaaaattt caccggttgt aacatcacgg aattctatgc gagtggaggg
     3601 aaatgtttct aatgctttta aatagacggc tccaccggta gattgaattc gtagcttacc
     3661 gtccagttct gccggataac caaccttgac atttttatcg acaaaaataa ttcgttcttt
     3721 ttccacttgt aacgcaacag gaagtggttt tctttcccat ttcatcaata catcagccaa
     3781 gctactccca gagaagccta taagcaaaga gacgagcaaa attggtagac gtttcattat
     3841 tttttctcct ctgtttttgg ctcaacacct tctaagagtt ttggaatgga gtgatagcaa
     3901 ttaaacccta atccccaagg gttttgagca gaatcgacat ccattctcac aatactgata
     3961 ggaaaacgaa tataaactcg ttttaccggc tgtccttgga aatgttcatc cacacttaaa
     4021 tcaagattga cagcccaact atcttcactg aatatggtaa ctttatcttc actatatcct
     4081 ctaccggtaa tttcatacac catacgggtt cggctgcgta gttcattgtt acgcagacga
     4141 tctttataat cttgtcgtaa aaatgcttca cagtgtggtg ttaaaaatgg tttgagggtg
     4201 gtgatatttt tctcataatc ctcttcgcca tttgtcatcc accgattcat ttgctggaaa
     4261 atttgatagg agaatgcata aattgttggt ttaggaattt cccaccaagc tcgttggctc
     4321 ccagcacgca gatctggtgg gttgtatatc gtaaggcgac ttgggaaagt atagattacg
     4381 cctgccagta ccaaaataat aatgaaaaac aggaaggcaa aaattcgagt cgttttgata
     4441 tgtttatctt tttcgtgtaa ttggcttttt aactggctca tttgttattt ccttctatat
     4501 cggcgaatag accaaaaccc ttctcgtttt ataaacttat gaccgttaaa gaggtcatcc
     4561 attttctttt caactaatct atttaaataa gcctctggtt ttcctcgttt aaccgcagcg
     4621 acaatacctt ttccgattaa gacagttgcg atgcagagca acattgccat tgccggaata
     4681 agaagccaaa aatcagttaa tatccacaag aagagaccaa caatcagacc taacataaat
     4741 cctaatccgg cagatatgcc gaactcacta actgtcatcc caccgtaaac ggtagcttca
     4801 cgattaaggc gggtgggaag aaaaggaatg gttgtatctt gttctgacat attggtctcc
     4861 tagacatttt aattagaaga gtccgactgc aagtttgact aaccacaagc agaagaaaat
     4921 cacaataaag ccgataatta aggcgagaat aaagtgtccc caaccttttt taccattttc
     4981 agatgtagct tcgttataga tgccaatcaa tgctttaaca actgtcaaaa tggctacggc
     5041 tgctaaaata acagctccga gagtgacaag acctttcaga acaatccaaa taatttccat
     5101 tggatctttg gtattactat ccacgcctgg aatttggaag tctgggattt tggaagcatc
     5161 aggaccggct gcaaatgcat tttggaggga accccagaag aagagcatta cagccaaata
     5221 acgactatgc agatgtttcg taagagattt aatgcggttc ataatagacc tcgaatctaa
     5281 tagataaaga aataagtaac acaagctaac agtgccactc ctttgagaaa taaaactaaa
     5341 agtgaaaaag gacttttatc tctaaatgaa aatcccttat aaccactatt caatgcccaa
     5401 gcgacggcta agagcagtaa tgaaagaaaa ataatggcga tcatgatttt caatctaaaa
     5461 gggtcgatac cgctggcaac agaaaacgca ttcgcagggg agtaagacat cactgccccc
     5521 gtaatttgct ataatcatca cttaatgtac gtagtacatt cggatcacga ggtaatgctc
     5581 ggcttggatt gatatattgt tgaattcctt ttttgacggt ttcaatatca ctgtgaatag
     5641 cagaatagtt aaagtattct cgtgttttag gcgaggcttt agctactttt tctgctcgtt
     5701 gaagtgataa ttttgccgct tccagttgct taattgcctg ggctaattgc tcttgttctg
     5761 ttgaagcaag tgctggcaag caagataagg taacaaggac aacaatacct ttccttaaag
     5821 atgttgaaat agacatagtg cacctctatt tttagtttta cttcaggtta agagtgccaa
     5881 aagcgatcct aaaatttaat ggaaaactct gttaccgttc agaagagaaa ttgcacaaaa
     5941 tagtaaatgg tgagaaagat attattctat gtttaagcta gtcaattaag tagtatcaac
     6001 accgaaatct tcacgcttta cgatgagata ccagatgaga tatctagcac tgttccttgt
     6061 agttttccca tatgttgccc attctcttcc ttcagcacag aaagtgggga atatttgcca
     6121 tgcagaaaat gctcaatata attacggagg tctttgggaa ttaagtttaa gaggaaagtt
     6181 aatctgtaat tattggcaat ttctaggcga tgatgagcga aaaaagatag agttacaatt
     6241 ggatgagtac ggggaatttc ctatttggaa tacctctgaa caaatttctg aacaaatcat
     6301 tgaagatgat gaatatccac aatattggga agtcgaagac tgggaggatt ctgattggga
     6361 tactgagtca gaaaatgaag atacagaggc aacaacagaa gaataagccc ccgcatattg
     6421 ctaagggctt atgaaattta caagaatttc ttgaaactcg ccgcagttat acagatggat
     6481 aaaccaaaca aacaggctgc tgggactaaa atgatgttcg gatgaattga aaacgggata
     6541 gataaataaa gcacccaagc tgtgaccatc attggcataa tataacgtct agcgtgatgg
     6601 tataggtagg ctgattcccg cccggcacca aattttcgta tatctcgtaa tgacagtcct
     6661 tcggttaaac cggaaagtgc agtcaataaa aagagtgggc tggtaaaaac aataataatg
     6721 aggcgaataa taaaggtgat caccacataa ataacagatt caatataggc tctgccgtag
     6781 tgatgtaccc actgttccat actaccatta cccggtgaag ttaaccactc cttaacaccc
     6841 gtataaacga ataaccagtt atacacgttt tcaataattg atgttgcaaa agcagtagaa
     6901 gacttggcaa acaggctttg agaaaagtca tccgatagcc attgcatctc attgagcatc
     6961 atcgtttggc tatgcaaatg cccttcttgc ggccaccaga aagcaatgcc tatccactct
     7021 aaaataatgc tgaatatgag agatactgca attgcagcaa gcgacatatt tatttttcca
     7081 aaaatcaggt tgattaaacc tgattttcgg cgagctttag tttcttcact cattgcaaac
     7141 tatcctctct atcgagctgg cactggacaa ggatatagcc ggaaggatta ttatcaaaag
     7201 caagataaaa agcgaaaata tctttggatt tatccgagtg acgcatagat acttcatcgg
     7261 cagaccataa cgaaagccct tgatctgcga atttttcggc aaactgatgg aaggaataac
     7321 cttgttcaaa ccattcaata aaataggatt gactatgaat caggagttct tctgcattat
     7381 ctaagccaca ggaagctgaa aactccccat taaaattacg gtatttattt ggtaaatcta
     7441 atagattggt tcttttttcc tctctcattt tggcactact catcattttc ctcttcatca
     7501 atatcgtaag gttcatctat gccgaaatta tctacttgat ggtctatctg tgttttatat
     7561 tgaggctccg acatcgcttc aaatgcttct gcaatgtctc gggacggcgt atattctgta
     7621 aatgccggtt gccaccaatt ttcaacaacg tgatagtttt tacgcatata atctgtcagc
     7681 tctcgtaaag attgatgcat catatcatct ttatcgacag caggtaacgg cattcgaatt
     7741 ttccataatt tactaccgtc cattaaagcg aatgcttgtc cttttggtaa attggtaatg
     7801 ttggccggaa ccaacatagg aacggtactt tcgctgatac gctgtccggt attggagcta
     7861 aacgccttat catcgtcagg attactggag tcagttgtac tggacgtgac cgtgctacgt
     7921 ttaatcgtca cttcgtgtaa ctgttttgtg agtaattctg ccgtagccgg ttcttttacc
     7981 ctcagcatat agagtgtatt gaagttacct aaggtttgtc ccgctttcgg tttactgccg
     8041 atacgagctt caatgtcgga gagtgtttgt gtataagcag ttacttgtat tccagcacca
     8101 ccgcctttgt tgatgagagg gataaattca tcacccatca attcattaaa ttcatcacaa
     8161 tgaagattaa ttttcactgg tttggatttt tctttgaatg ctcccggtaa tccgtcattt
     8221 gtcccaaatt tatataaatg acctgccatt gagactaagt cagcaaacat actgtttcct
     8281 acagcggccg caactgtcgc atcagagaga gcatctaaac caatataaac gattcctcgt
     8341 ttacgaataa tggattccca gtcaaaaatc ggacgttcat ccaaaatatc agcataatcc
     8401 ggggataaca gctcagaaat tttccctgtc gttaattttt ccaataacgg caacaatgag
     8461 gcaacaattt tatcgaaata ggtacggtca tagcgtacag cactggcaag tccttgtaga
     8521 attgggtcaa agactgcact ttcagcaatg tacttgttga tcacaaaaat cagcggacgg
     8581 tctttcattc cgaaaggaag tgctttttca tccagtccag cggcgatggt tgctaaattt
     8641 tcccaaattt ttggatcggt tttacgaatg aatttttccg cataatcaag gaataatgaa
     8701 tcaatatttt gtacaaactg ggaaatttga acatagtttg ggcgatttcc caattcaact
     8761 aatgcacgtg cgacgatatt gacaaatcgc caagcgaact ctttaaatgc cgccgagtta
     8821 cccgctccac ttagctgtcc tgaaatacgc ccagcgactt ccgaaatacg attaaagcgt
     8881 cctactgggt tataacgggc agaaatttcg ggataaccta gatggaaaac ataaaactca
     8941 tcttctcgcc ccgctcgttt tgcctccgca tacattcgtt tgagcatatc ggcatcgcct
     9001 ttcggatcaa agaagactac cacttcacgc tcatcagcag ttttacctcg gtggatatcc
     9061 tgggtaacaa agacctcagc taaacgagtt ttaccgacac gtgttgtacc gaatactacc
     9121 gtatgcccaa cccgagagct aacggattga acgacatcaa cctcatccgg ctcaattcca
     9181 tggatagcag gaataccctc aacaggtggc agaggtctaa ccagattcca ccggctatcc
     9241 tttgaggtaa gatgtgttag ccaattttcg tgtcgttttt catactcacg agccatttta
     9301 aatagcttag aaggctccag atattttgaa ccgttatccg aaaaacaatc gtgtaaccgt
     9361 tgagtgtgaa taggtttcca ttcaaatccc ttaccgacaa acagatactt attactgacc
     9421 ggaatttgct tgcttgtcat tgaataatta ggcaaacgtt tcaggttgcg atggtaacgc
     9481 acaatttgcc aaccttgttt tgcccgataa aagctcaatg ctccaaaacc agctgcaata
     9541 ctgtaaccga tacttggatg gagtgccaaa gaccaaggag ctgcagcact gacaaaggca
     9601 caagaagcgt gaaccgctgc cggaaaaaat tcaacaggag gtcgtaacca cgcctctaag
     9661 gtatgtttag cagacattat tgtgaaactc cgctttcagt gattaagaca gggtaatgtg
     9721 caataccaat tcgctctgca aggtcatctc cgggagttgg taatattctc agttccggta
     9781 caatgtctcg taattgatta agttcggaga gtgtttgtac attcactaca agccctgttg
     9841 cattcaacgt gatcaacttc tctcgatttt gttgtaacca ctgagctgag gtattatctg
     9901 ctccaattaa gaaaatggct tgcattccgg ttaaatcaaa tggtttttct ttaatagtcc
     9961 cgggagatag tttatgggaa acaatgggta aaatatcagc ctcactcact gaggctgaaa
    10021 tggaattcgg atagtttggt gcattttcat cgtgttccgg ttgcaaagat tcataaaaac
    10081 gtaccgcact ttcaccaccg aaatcagcaa tcacggttaa atcagcccaa gagaaatggg
    10141 acacatataa actaaacaat aatactttta ccttgttttg catttttacc tctgaagagt
    10201 attttggggt tctacccaaa ccattgcatt tttaggttca acccaaatca ttttattatc
    10261 cggctcaacc catttgaccg attttcccat ttggcttgtg ggataaacga aagctgcaac
    10321 tccggtatga atatgccctt gcttggagac agtcataaaa ttggcttctt gcttatgtgc
    10381 taaaaaacgt cctttttggt aattgagaaa gtctcttacc gtcatccaac ttttcattcc
    10441 attacgacgc atatttaaaa tgtcttcttt agtagctttc cccatcattg ctcgatgcag
    10501 cccatctaag ccgatattat gagccatata taaattctca tcagtaatag ggatattacg
    10561 gagttgaaat tgctcaatat gccaacgtgc caataatgcc gttgctaagg tattcgtata
    10621 tttatctcga cggggatcgg cgtaagaacc ccgatttttg gctgtaatca acttcatacc
    10681 aagttgcttt cccctctctg tttcagatag ccagttccag gttcccatag taaactgccc
    10741 aacaccggtt gctcctgttg gtgaaatgtt gccataccag ccatcttcca ttttgacaaa
    10801 acctcgtagc attgcttcac tcacctgata acgttgagca gccatacgaa tatagctgtc
    10861 aatttcagaa ccaaatccat tgaagggctt tgcctgagaa atgctaatgt tggaaagaaa
    10921 gactgcaaca atgactaata cacgagtgat gtccattcac catcctgttt gatttggtaa
    10981 gcagcgggca tttttcctaa cgaatatctc agccaatagc ctttatcgtg gttaagggta
    11041 atcaatcttt tactgacttt tattgggtca atattattgt cggcagccca tttacgaata
    11101 tcattatcgg agatgttttg cccaacaata taaatatcga gaggtgtttg attatttgcg
    11161 taagagagga ttttcccaag atcactttta caagaatcgc agttatcaaa acgggtaaaa
    11221 taaaccacac gacctaccga ttgagaaata tgtggttcaa cctcaaaagg tagctcattc
    11281 ggataaagtt tctcaaactc ctgacgataa actttgtcaa aatcaagttc ttttgacact
    11341 cgttcataat attttttcgc caacatacga gcatattttt ccctttcctc agcagttcgt
    11401 gcttcgatac ctaaagcagt taacggatct agatttggcg accacatacc tcgctcacct
    11461 ttcattaatt cggtataacg actccattct tcaacggtca atccccattc tttagcctgt
    11521 tttaggctat cacttaattg tgattgttga tgttggcttt gtttctgcaa agtcgattgt
    11581 gagctactta cggtctctgt ttgcatattt tgagccagag taggtaatgc aaaggacaat
    11641 aaaagaggta gtactgccaa cggtatagct ttacggcata aattaaactt cattgatatt
    11701 tccctcatta ttcctcaatg acctcggttt taattgttgt cgttgtaacg gcaacagcag
    11761 gtttatgagg gttttggaat gaactttccc gagctttaaa gcaaatcgta cgggatatat
    11821 cattaagagt tagttcataa gcgggacctg caatcatttg tagagcttca tataatttca
    11881 tcggaccgaa ttggtaatga acttttggaa gaggtcgggt aaaaagtgtt tgaaccgcat
    11941 taccttgttc tccgataggt ggataacaca aatctaaacc cgtattagtt aatgtagaac
    12001 gcaaaccttg ctggacattc gcagtaaaac gatttttagg attggagact ttgactgata
    12061 cgacttgttc aagcagatat ttttgacctt cctccggagc aatactgatt aaggtgtagc
    12121 gtccgtcacg taccacttcg gtattcgagg tagtctgttc ttggtaaata tctttggaca
    12181 cgatacggtc ttgtggaggt aattgttgca tttgaggtgt tagcaatgaa tcaggcatag
    12241 gtgtgatttc atcactattt tgagctgtat cctgttgatg aacacaacca cttaagccaa
    12301 gcataaaaac agtcattaag gatatttttg ttttcattta atctctccaa gtatgaaagg
    12361 aatctagacc aactatggcg aagtcattgc tgattttgaa tgatttattc tgttgttgat
    12421 tgagagaata aaaaaacgcc atcattagac ggcgtttgaa aacacaataa tgtgctgtgt
    12481 taatcggatt tctccttagt attcataaga aaataagatt gttgtacagc tacgatcagc
    12541 ttctgtgatg atataaagac tttcatcatc tacatcgtag cgagctacaa ttctccctcc
    12601 gtatttcatt gcttcctgat tcgctaattt atcttcctca cacaaattgc cccaatcacc
    12661 ataacagtaa cgattaagca attcaaccaa ggcattttga ttgaaacatt cagcaacagc
    12721 acgagttgta catactcgac caagttcaaa cgtcatacat ttctcctaaa taaaatacgg
    12781 ggaaatgtca cccattaggg gagtatttcc ccaagtgggt ggactaagac tgcggcaaga
    12841 gtcgttttta gtaaaaattt gcaaaaaatt aggcagctaa tttagccggc gtcatttctt
    12901 tacgaatctt gtctaacatt tcattccaat catctatatc acagattctt tggcgattaa
    12961 tgtaaaaatg cgtgtctatt gcattgatat agtagtcaaa ttcaactaaa tctgaatctt
    13021 gctcaatatc taattcagta cagaatcgtt gaattaagcg agagatgaca agctcctgat
    13081 acagattacc gaaatgtggt acagtttcaa attctttggc aacaagccaa aagtcttcaa
    13141 tactgacaat atcgctatat tcttctaaga tggcttccca ttgtcctaaa tagcaagaga
    13201 tatcatcaaa gtcaaaaaag gaatcttcca ttatgtttct ccaagtttta aataaaaagt
    13261 ggggaaacat acctaccgag aatgtttccc gatagggtgt atagtcaata ttagcgataa
    13321 atatcaccgc tcactgtgtt aattttacct aaaatagatt tacaatgaat gtcagcactc
    13381 acagttttca cattcgaggt tacattacca tccactgtga catcaccact gacagttgaa
    13441 acagatttgg catcgcctgt tacacgaaca ttttctgaac ctgcattgag gttggttaca
    13501 ttgccaaata cttcaatgtt gatagtcgga gagggttcta atgcaattgt ttgtccatca
    13561 acaattaata cattattgcc ggcagccatt gagatataac ctttatttat cccaacaact
    13621 gtttgcactg tactattaat gatttgaacg ctgttgatct ctttgccttt agagtcaaag
    13681 acttgtttac cgttgatata aataccttgt cgattcatat aataatcctc tttgtattag
    13741 atgttaaaat gctcgataga atacgatatt accattggaa atttcgttgc gagcagcctg
    13801 tacaaacgta gttaattttg ctaaagcagg tgtattagtt tgctctaatc ctactcgctc
    13861 taacatatct agatcttcta tgttcaatac caccgtagca tctttccaga atgtctcaat
    13921 aggttgatag tattccggtt ccgatgaggc tttaatttct tttttgaaga aatgaaaagc
    13981 catctcgttg tgaactaaga aaatccctct atcatcggct tcagtccaac ggaaaaactc
    14041 cttggaatgt tcaattaact gaatatctgt accataaatg gggttatccc aatcagacac
    14101 aatgttatat tcacgctcta agcctaacga attaaaacgt tcaagagaga ttgaatacgc
    14161 tctagcaagc caagaacgtt gagcccaaga tttttcaggg attacctgtg ccggattttt
    14221 tccgaaccaa tagcaatccc aatctaggta aatccaatcc ttttcctcta tgcttttgtc
    14281 aaaaccaata atagtaaagc cttgatcaag ccatttacca tagccgttct gaacaaagac
    14341 aacatcgcca acaataccat caaaatggcg accattaagg actgttggtg ataatgtttt
    14401 gacaaattgt tgaagtgagt tcatcgtgtt tctcctaaaa ttgtaaaata aaggaaaaca
    14461 caccgcaggg agtgtttccc tacgggacat aaagtaaagc ccaacataaa ttgtcgggct
    14521 tgggtaaaat tactcagatt gctcatctgc ttttggtttt tcttgataga cgatttcccc
    14581 atcaatttta atcattttga tgcggattaa gcgaccttta agagacactc cagtatcgcc
    14641 ttttttgtga tatttactgt cacttgaata agtgaaagta tcgaaccaca aatcagccat
    14701 tacaaatgat acaagcactt ttttctcttc agagaccgct ttttggcatt ttttgatgag
    14761 tgtttcggtt tctttaccga ctacattcat atcaaaatat ctgtactctg gtgagtcaga
    14821 ttcgccaaca agagctgcaa cacgacaagc ataaaaagga tttccttttt tatgctctac
    14881 taaacgaata tcgtttaaat agccaatgcc ggtagtatgt agattgaagt aatttttttg
    14941 agtagaagtt tgagttgtca tagtttgttt ctccaaatgt aaaaaagcgg agaaacatcc
    15001 ttacccaaca cgggaaaaat gttccccgca aggtggaagt aaaatggaat ctcaatgaat
    15061 attcactgaa atgataggga ttgagttggc attcctgcaa atttacagag ttccctttca
    15121 gaatgctggg agacattttg gcaataactc aactacctct aaggatagcc gtcgcttctc
    15181 aggagttatg cgacttatta agtgctgtta tatacagcgt cttaaattga ggataattta
    15241 gccatattga atcataaagt taattgagaa ttgaattttg attttagaga attggaaatg
    15301 acaacaccgt tgataaatca cttaccaacg gtgttgtact tttgaagaat aaatgaaatt
    15361 taagttagac caatataagt tactatattg aaaatagcag caccttcgtg acaatgttga
    15421 tattttcgtt cgtaatttac ccgattacct tgtggtcttt aatcggcata tctgtggcat
    15481 catcgaggac acaaacggca ccctttattc acctgtgggc tcaggctcag aatagttagc
    15541 agtaattgca acgtcataat ccccccaatc gggtaatatt atgacgttgc aatcacgatt
    15601 tagacaatta caacagacta atgtggctgg cattatccat ttaatgttta gttggcattc
    15661 ccacaaagtg gagttccctc tcagaatgct gggagacatt ttggctggtg tagattgata
    15721 accgacaatc tacaaaacgg gttctttgtt ccttgataat accataatct acttgaattt
    15781 ataactggct tcttaattta ttcagttgat cgagtacatt taaattacta cttttcttag
    15841 cagatttatt tgaagctgat tttacctttt tatcagcctc tttatgttgg caatctggat
    15901 aaccagtaca tccccagaat gttcccttag cgtgattgat ttttctcatt ggcttaccac
    15961 attctgaaca ttttcggatt tcaatattcc caagtgacat tccctgttgc atacaactgc
    16021 cgataagttg ttttacaaat gcttcttgct tttgcataaa tgcatcaagt gtcatactac
    16081 cttcggcaat ctgattgagg gcttgttccc ataatgccgt taaaccggga tttttcagta
    16141 agtccggcaa actatcaatt aaggcaacgg cttctgctga ggcaaccagt gattttttct
    16201 tcttaaggag aaatcctttg tcaattaggc cttgaattaa tccggcacgg gttgcttctg
    16261 tgcctaaacc ttccgtttca cgtaagcgtt gtttgagtct tgggtcagtc acaaagcgag
    16321 cggcattttt cattgcatcg agtaatgtcc cctctgtata gtgtgcggga ggtttagttt
    16381 gcaatgttcg gacttcagaa tgagtgacat tgcattgctg atttttagtc aatacaggta
    16441 atccttgttt ctcatcatca ttaccagttt cctcatccac atttttgcca aacaagatac
    16501 gccagccttg agcaacgatg acatttcccc gagcaaccag agtgtgccca ctagattgca
    16561 gagtggcaac ggttttatcc atttccaagt gcggtaagaa ttgagcaaga tatcggcggc
    16621 gaatgagatc atagaccttc atttcctcct cactcaattt acttaaatca gcttttttaa
    16681 tggttgggat aataccgtgg tgagcggtaa tttttttatc gtcccacgcc cgactttttt
    16741 gtcgcaaatt taatttaggc aagagagttt gtagccctga atcagaggca actaatgagc
    16801 ggattacgtt aggaacatca gaaaattgtg attctggcag ataaccacag tctgtacggg
    16861 gataagtcgt gattttatgc tcttcgtaaa gggattgtgc gatatccaac acctgctgag
    16921 ccccaaagcc aaacaagcgg ttacattcgc cttgtaaatc acttaatgcg tagagtaacg
    16981 gtggagattt tttctctcgt ttagtttcaa ccgtcaccac tttggctaag cctgtttgtt
    17041 taatttgagc ttcggcttgt tgtatgacac gactatcaag gcaaagtccg gactcatcca
    17101 aatactgttc aggtactgca agcccggcaa cgaaagtttc accagaggtt gttgtcagct
    17161 gaaccgctaa cgcataatga gatttaggca cgaaattagc aatttctcta tctcgattaa
    17221 ccacaagagt taatgttgga ctttgtactc gaccaacgct caatggctta ccggaatagc
    17281 cttttgcttg agccattaag gtaaataaac gggagaagtt cattccaatc aaccagtccg
    17341 agcggctacg tcccataccg gcgtagtaaa gagcctcggt ttctttacct gatttgagtg
    17401 tttgaagagc ctttcgaata ctggcatcat ccagagctga tagccagcaa cgttggattt
    17461 gacctcggta tccagctaaa tctaacagct cacgagcaat catctcacct tctcgatcag
    17521 catcggtcgc aatgaccacg gaggttgctt ttttgataag ccctattaca acagaatatt
    17581 gcttcttaga ctcttttttc ggtgtcattt tccactgagc aggaataatg ggtaatgttt
    17641 caaatgccca gcgtttccac gcttcatcat aatcttccgg ctgatattgc tcaacgagat
    17701 gcccgaaccc ccaagtgaca ataatagatt tatccgcagt cgccagcaag ccttcacctt
    17761 ttgaagtagc acccaatacg ccggcaagat ctcgagcttg agatggcttt tcacaaataa
    17821 ataatttcat attatttcct aaaatgaata cagataggca aatagtaatg tgctgattaa
    17881 atagcattca acgacttatt gtctcgtagg atgtaataat ttgagaaata aggacataaa
    17941 aaatcccagt gtttccactg ggaagaggtt ctaggagcaa tatgagttat tattttaatg
    18001 tattaagtaa acgctgtttt gcactatcga gccatctagc actaccagtt gctttccatt
    18061 caacattcac ctgattttta ctgccttttt caatgataac ttccaagtag ttttcaccta
    18121 agtgtacccc atcagtatct acatcagatt caaaatagcc ggaaacatgg taaaaagtac
    18181 cttgtaccgt atgataaact ttacgggagt cactatcagc attcgttggg cggaagccaa
    18241 attcccgacg aactttcagg aatacatcat caatattccg cttcaactgc aatgtgccgg
    18301 aatcttgata aacgtactta ccatttcggg ttttagtata aacttgtcgc ccattatgct
    18361 gttcaacaga gccgtcttta gagccataga gcgtctgatt catttgcccg gcccaatccc
    18421 caaccttatc gttaattgct gagagttcag cacagcctga aattagcatt gtagaaacaa
    18481 gaaataaact atatttgatg taacgcatag aattctcctt acaagcgggt tatctgcgtt
    18541 cattttttgc aaaagtgcgg ttaaaatcta cttaaaactc ttttacttac aaagagaaaa
    18601 aatattatag ctttctgtca cacagtagac catttagatc gggtctgctt agttgtgaga
    18661 ttgttaatat cgcagagata agttctaggc aacgttcaca gctatggaaa atatgagttt
    18721 gagatgacat atgggatata cgcacatttt cccagtcatc tgggtataca catccgtgaa
    18781 tttcagtcaa gtattgcttg atatgctctt ctgtggcttg ttcaacccag agctctagct
    18841 cagtttgata ctggtgtaat attttccatc gagttggagg gaaattcata tatttatcct
    18901 ctatcaaagt tatttttgca attatttcat caatgaagag agttaagaag tatttttatt
    18961 actcactata tggagagata tgttatgtgg aaaaaaatta ggattgattt tactgataca
    19021 gtgaaatgtc aattttgcag tagaatgatt acatcaggca aagctattgt tgttcaaaat
    19081 gaacttggca atatctcttt ttcaggaccg tcttgtgctc aaaataagaa cggtcagaat
    19141 gtagtcaatc ctaaagagaa aatagttgat atcacaaagg gatgtttact tcatgagcca
    19201 acaacaaatg ataaaacgga taagcaagta gatgttgagc aagataattt cacatccata
    19261 cacgatgacg aagtacataa ttatttggac aataatgctg ttaatgcata cctgacctta
    19321 agatttgaaa aactatcgca tttaacctcg attataaaat ctcaaaagtt aaatgaaatc
    19381 tatcataact atgaacttac agggcaaata tctcaaaaag atgaaagtta cataagagtg
    19441 attatgtatg gtgaggcata tcctttgtat acataccaaa acttacaagc tgtttatgct
    19501 gctgaatatt ggcttcaatc atttattcag cataatccag agaatgactt aaattttata
    19561 caagacacat taaatcagct cagaagaaag ctaacattaa ctgaaaaaca gattatgggc
    19621 ataaataatt ggtttaagaa ttctgatgga aaaatggtga aattaaagac aaatgctttt
    19681 gtaagaggga aatagttaac ataattgtgg tggccactta ttttgttacg taggcccgac
    19741 gtaagactgg ttttaaaaga ctctttccta ttatttgctt gcttattttg acaaattcaa
    19801 gttatatgta at
//
LOCUS       DANLXO010000044        19788 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.044, whole genome shotgun sequence.
ACCESSION   DANLXO010000044 DANLXO010000000
VERSION     DANLXO010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19788
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.044"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1081)
                     /locus_tag="PXD69_001303"
     CDS             complement(<1..1081)
                     /locus_tag="PXD69_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6283508.1"
                     /translation="MGIMSKSISIFNHKGGIAKTTTAFNVGWSLANQGYQVLLVDLDS
                     QCNLTGLVLGYDQCKEDSDLALFYNNRHHLTMEGIVEALINGQSPDNYLSGNVGQITQ
                     TLNPNLFLLPGHLNVSELDSQISVSLKIAAGVPATRNIPGNLPTLIKKVAEQNNIDYI
                     LYDLSPNVGGLNEVILMSSDYFIVPTSPDFFCWQAVGSLAKNIRKWHNELKAFKELNG
                     FNQSSYAIKNKPQFLGTIQQRYRPRKGQPAKSFEKWIERIRNEVITNFVPVLKTIDCA
                     IDDTAIYAALKSTNSDLEPFDLAHIADFNSLIAISQELRVPVFSLTKEQIKNSGQFGH
                     ALNTMDESKENFDQEFQSLAERIIQL"
     gene            complement(1146..1577)
                     /locus_tag="PXD69_001304"
     CDS             complement(1146..1577)
                     /locus_tag="PXD69_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283509.1"
                     /translation="MKKMAIVALSAFFSMNAFANNNVVYSCTTTDNQTLKVTKEGGNY
                     VYSHGNTTFKNPVKEALKNPASEIAGGSQFTTISLELRNAGKSYIVGHIEADPKSPFE
                     ASVQIQDIKTGNDITSFECRSDKPIRHNFDRKLMRKSGFAA"
     gene            complement(1581..3683)
                     /locus_tag="PXD69_001305"
     CDS             complement(1581..3683)
                     /locus_tag="PXD69_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL6283510.1"
                     /translation="MKKAKSLKFLTACIMLTTMSGYANSNTVNVGNSISNFIENTTGY
                     RTGNLGVSGNNALTEYYPVLSDYMHYSIGGGSAISAPASRGRPNQYGIGIGWKSNLTC
                     GNFDIKLSIKNQLNGITEGFKDLYGNIIESATGAVASLPAMIIQRANPQLYDILSNGL
                     YQGKLDFNNFKTSCEAMSNQLADLAMDSKLAKMAGLHRAAEIAETEPDAMAAKKKMDK
                     KDAEKGIPWVGGEQRGGKNQKPMAIVADIVGAGYNLALGRGPLEKGDIPIASCDGMLC
                     TEWKNPSEAAAYASEVIGETFLDACETCEQSSSGAKAGKGIAHFIEQTTIEKATKLEA
                     ALNHLDSLTPEQLNSLSTSTVSVTKGVLEAIAASPDAALLGARLSQELAISKEMEKLL
                     LIRRAMLAGMREPNVIKSSLVEEAERNLKLLDREIEQVKLEMELQRSINGNTALAAIT
                     QQMNEQALAIDDNAMGDGNRRFANLSNQAGANNLNTSGIANSAQNAVGDRYIAIPKSD
                     GSGMSDFYGAYKASPTNIVSNVNVGSYTQIAQMNGNANEQATALIKQFEGYLSHGKWD
                     VNANRAGYGSDTYTTADGMVHRVQKGTYVSREDAERDLARRMPQFMNVARGNVGADVW
                     AKLTPQAQAALTSVSYNYGSLSKLESVQKAAAVSAQSGDMTALANSIRNLQGHNNGVN
                     ARRRNQEADYIINAPKGN"
     gene            complement(3710..3988)
                     /locus_tag="PXD69_001306"
     CDS             complement(3710..3988)
                     /locus_tag="PXD69_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HDL6283511.1"
                     /translation="MQAKTFYYLPLLLLSAMASASPANKPSDVTVKVFTSESYPKVFP
                     HSGDWATHSDSFSNTENYSWALWRPYSCCKKQGQVFLGHVDWKSTHTH"
     gene            4957..5388
                     /locus_tag="PXD69_001307"
     CDS             4957..5388
                     /locus_tag="PXD69_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL6283512.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEPKKGNPFYACRIAAL
                     VGESDSPEYRYFDMNVVGKETETLIKRCQKAVSEEKKVLVSFVMADLWFDTFTYSTDS
                     KFHKKGDTGVSVKGRLIRIKMIKIDGEIAYQEKPKSDEQSE"
     gene            5406..6398
                     /locus_tag="PXD69_001308"
     CDS             5406..6398
                     /locus_tag="PXD69_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005588345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283513.1"
                     /translation="MLCWALLLDVQDLRVTFKTPDGDVTAVNDLTFSLNAGETLGIVG
                     ESGSGKSQTAFALMGLLADNGRISGSAKFNGQEILNLPETQLNRLRAEQIAMIFQDPM
                     TSLNPYMKIGEQLMEVLMLHKGMDHKTAFEESVRMLDAVKMPESRKRMNMYPHEFSGG
                     MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKSEFNTAIIMITHDLG
                     VVAGICDNVLVMYVGRTMEYGTAEQIFYTPSHPYSIGLIGAVPRVDGQEEELITIPGN
                     PPNLLRLPSGCPFQPRCVHATKQCLKAPALTLLNDQRLRACFVPAEQLIRGNAS"
     gene            6395..7384
                     /gene="oppF"
                     /locus_tag="PXD69_001309"
     CDS             6395..7384
                     /gene="oppF"
                     /locus_tag="PXD69_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000994906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HDL6283514.1"
                     /translation="MNTEKKVILEVKDLSVHFNIKDTKSLFFAKHQTLKAVNHVSFQL
                     YEGETLGVVGESGCGKSTLARAIIGLVESSGGNILWLGKELTQQSAKEWKTIRSDIQM
                     IFQDPLASLNPRMTIGSIIAEPLKIYQPHLTAEEVKEKVRAMMMKVGLLPNLINRYPH
                     EFSGGQCQRIGIARALIVEPKLIICDEPVSALDVSIQAQVVNLLKSLQREMGLSLIFI
                     AHDLAVVKHISDRVLVMYLGNAVELGDYEQVYHDTKHPYTKALMSAVPIPDPQLERNK
                     QIQLLEGDLPSPINPPSGCVFRTRCPLADQHCIADKPLLKGRDNHVVACFKAE"
     gene            complement(7488..8246)
                     /locus_tag="PXD69_001310"
                     /pseudo
     CDS             complement(7488..8246)
                     /locus_tag="PXD69_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326384.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
     gene            complement(8376..9017)
                     /gene="bioD"
                     /locus_tag="PXD69_001311"
     CDS             complement(8376..9017)
                     /gene="bioD"
                     /locus_tag="PXD69_001311"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HDL6283515.1"
                     /translation="MAKVFFITGIDTDIGKTIATGWYAKKLMQQGASVITQKMIQTGC
                     RGIAEDLLIHRKIQGIELTEEDKQGITCPYVFDYPCSPHLAAKLEPRTIERKKIETCT
                     ALLCEKYDYVLLEGAGGLCVPYNEEETTLDYLCQHQYPVILVTSGKLGSINHTLLSLQ
                     VLNSKRVSVHAVIYNLYPETDQVISQETQHFLRRYLEKYSPNTLFEIMDLISV"
     gene            complement(9035..9790)
                     /gene="bioC"
                     /locus_tag="PXD69_001312"
     CDS             complement(9035..9790)
                     /gene="bioC"
                     /locus_tag="PXD69_001312"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDL6283516.1"
                     /translation="MDRIDKGRIKQRFSAAVSNYDQQARAQQQIHQRLLSLLSYIDRQ
                     AFQRALEIGCGTGGLTKQLMSQLQVEHWELNDLCDMREHLQSVLPQPFHFHCGDAEQL
                     PFPQQYDLIASASVVQWFEDKAGFIARCKVRLKKHGFLLFSTFTPENLTQIKHLTGVG
                     LTYPRLEDWQKWLVPEFEILALEHEEIVLHFDDPLAVLKHLKQTGVTATQQQRWTKGQ
                     LHAFCQQYQQHYRNAQHKVELTYTPMYVLARLT"
     gene            complement(9794..10441)
                     /locus_tag="PXD69_001313"
     CDS             complement(9794..10441)
                     /locus_tag="PXD69_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005758126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDL6283517.1"
                     /translation="MKTQHISQQGDNLIVYFAGWGTPPSVVEHLILPENYDLCLCYDY
                     RDLHCDVDFSAYQHIRVVAWSMGVWVAERVMQGYPLLSATAINGTGLPCDDQYGIPEA
                     IFAGTLSGLNEDNRTKFERRICGSKTLLRDYQHYSMRPTLQEIHAELTALYTFLQQDH
                     RTDLISWSKAIVGSKDKIFPAQNQRAYWQDRCAITEIAGEHLLFPHFTHWETCWL"
     gene            complement(10438..11601)
                     /gene="bioF"
                     /locus_tag="PXD69_001314"
     CDS             complement(10438..11601)
                     /gene="bioF"
                     /locus_tag="PXD69_001314"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HDL6283518.1"
                     /translation="MIRYYQQQLADLKAQNQFRQLPQLIHRGRFIQREDNTMLNMSSN
                     DYLGLANNEALRQAFFTQYQDQLPALTSSSSRLLTGSFPIYDELESLMAQAFGRETAL
                     LFNSGYHANIGILPALADKKTLIVADKLVHASMIDGIRLAQCEFVRFRHHDYVHLEQI
                     LQKNDRTFERIIVVTESVFSMDGDCADLTQLVALKQRYPQVMLYVDEAHAIGVLGEKG
                     LGLAEQQGCINQIDILVGTFGKALGSMGAYVICDQVIRDYLVNKMRPLIFSTALPPFN
                     VAWTHFVFQQLPHLQAERAHLAQLSQHLRQAIVDIFQVPMPSESCIVPYILGDNELTV
                     RTAQRLQQQGYYCLPIRPPTVPKGTSRIRFSLTADMQVAEVEQFIACLRELAE"
     gene            complement(11598..12899)
                     /locus_tag="PXD69_001315"
     CDS             complement(11598..12899)
                     /locus_tag="PXD69_001315"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDL6283519.1"
                     /translation="MNEQQLLECDRQHIWHPYAALNADFPLFAVERAEGVYIQLKNGQ
                     QLIDGMSSWWSAIHGYNHPRLNHAATQQLSQMSHVMFGGLTHQPAVELAQQLVNILPE
                     SLDKIFFADSGSVAVEVAMKMAVQYQHAKGETQRYKFATIRSGYHGDTWHAMSVCDPV
                     TGMHSLFAKGLPVQYFLPQPPVKFGQAWQPEAMQPLQDLLAQHGDEIAGLILEPVVQG
                     AGGMYFYSPEYLVQAKALCEPYGILLIFDEIATGFGRTGKLFACEHANVVPDVMCIGK
                     ALTGGYLTLSATITNQAVADVICSGEAKCFMHGPTFMANPLACAVAAESIKLLLASPW
                     QQRIQQIEQQLRQELRQAEALDCVAEMRVLGAIGVIEMKAPVNMASLPPRFVQNGVWV
                     RPFGKLVYLMPPYIISSDQLSQLIHGTIRTLQEEYAHKESL"
     gene            13041..13928
                     /gene="psd"
                     /locus_tag="PXD69_001316"
     CDS             13041..13928
                     /gene="psd"
                     /locus_tag="PXD69_001316"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755522.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL6283520.1"
                     /translation="MNILEKKAQLSYWQRIKIAFQYVMPQLYLTRLAGWFAKQQWGAV
                     THFVIKLFAKKYHVDMSEAAKPNFSDYASFNEFFIRPLADNARPINQNPTALCLPADG
                     RISQLGHIEQDLLLQAKGHYFSLNDLLAGDEALAHHFKDGEFATTYLSPRDYHRVHMP
                     CDATLCKMIYVPGDLFSVNPFLAEHVPNLFARNERVICVFDTEFGKMVQILVGATITA
                     SMSTVWAGVINPPRPEKITTWAYEGESAVKLLKGQEMGAFQLGSTVINLFEKDRVQLA
                     SHLQVDSPVRMGEILAHQK"
     gene            13953..14507
                     /locus_tag="PXD69_001317"
     CDS             13953..14507
                     /locus_tag="PXD69_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL6283521.1"
                     /translation="MSQQFFDQVSLESQLEVSAEAVAKGIFDVLNQNPPALELNEVSH
                     ALQTLQQQAKFKEIEAVGAQFLAENAQKAGVNTTESGLQYEVLVAGEGQIPAREDKVR
                     VHYTGTLIDGTVFDSSVKRGQPAEFPVNGVIAGWIEALSMMPVGSKWRLTIPHNLAYG
                     ERGAGASIPPFSTLVFEVELLAIL"
     gene            complement(14567..14890)
                     /locus_tag="PXD69_001318"
     CDS             complement(14567..14890)
                     /locus_tag="PXD69_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283522.1"
                     /translation="MNWKAVLIFSVLGSLVSCASYSEHAVQRIEAGKSFAVTGNTKRI
                     NTMACQDNDDWYLDGYRVGKSFREHQQKMLIQRTAYCEEQTGKAVPDKFRHSWNSGYQ
                     QGLKR"
     gene            complement(14914..16017)
                     /gene="proB"
                     /locus_tag="PXD69_001319"
     CDS             complement(14914..16017)
                     /gene="proB"
                     /locus_tag="PXD69_001319"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL6283523.1"
                     /translation="MKIDKTLVVKFGTSTLTQGSAKLNLPHMIDIVRQLAQLHQAGFR
                     LVIVTSGAIAAGRHYLNHPQLPPTIASKQLLAAVGQSQLIQTWEKLFAIYDIHIGQIL
                     LTRADIEDRERFLNARDTLRALLDNQIIPVINENDAVATSEIKVGDNDNLSALVAILV
                     QAEQLYLLTDQQGLFDRDPRKHPDAKLIADVDKITDHIRAIAGGSGTSLGTGGMSTKI
                     SAADVATRSGIETIIAPGNRPNVIVDLAYGQAIGTKFSVQADRLESRKQWLYAAPSAG
                     IITIDAGAENAMLIQHKSLLPAGIVNVEGRFSRGEVVKIRTQQGKDVALGMPRYNSDA
                     LHLIQGKHSQDIEQVLGYEYGAVAVHRDDMIVL"
     gene            16183..17171
                     /locus_tag="PXD69_001320"
                     /pseudo
     CDS             16183..17171
                     /locus_tag="PXD69_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252470.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
     gene            17246..17893
                     /locus_tag="PXD69_001321"
     CDS             17246..17893
                     /locus_tag="PXD69_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDL6283524.1"
                     /translation="MTINTYAKFAPTVFVAKCSESHTKGEIITLTSKYGNETEVQVHN
                     LVKQDGEHYFYSFTRCDGMDSQSFAQQKAERYQGYADNAAKRSQDWVNAANEGCDFLS
                     LGEPIKIGHHSEKRHRNLIERNARRMDNAVAEMNKAASYESRIAYWEKMAGKIDLSMP
                     ESLEYFKFELDKAKTKHKELKDNPEKREHGYSLTYAKKAVNELEKKVKLAELLWA"
     gene            17917..18324
                     /locus_tag="PXD69_001322"
     CDS             17917..18324
                     /locus_tag="PXD69_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL6283525.1"
                     /translation="MNRQGIYINGKQVFDSQGEDIQSIGFFGCNIQTVVGINKGSILV
                     SSNSNQLLVNGQSIELGSEPVLKIEVLGNVQKLSAGAADVSITGDAGSVDTVSGDVSI
                     KGNVASYVKTVSGDVRCRAITGSVETVSGDIYR"
     gene            18422..18772
                     /locus_tag="PXD69_001323"
     CDS             18422..18772
                     /locus_tag="PXD69_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283526.1"
                     /translation="MTTINLSQQERELVEFVWNNRNTPWFFHCSVSNVSRNNTSRQIA
                     VCVIKDNQLISLDELIAKLCGYKLRQNGLYVTVHNMDAVFDTLYRFMCKLNDEMEANE
                     NVCPYLSLAHYEVF"
     gene            18863..19225
                     /locus_tag="PXD69_001324"
     CDS             18863..19225
                     /locus_tag="PXD69_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283527.1"
                     /translation="MIDTFFDLDDTSCYLGNWEDILKEYDDCLSVEDFWHSAKEFDTV
                     PHFGNLYQERVILKLIARFCIELNIEQDSGLVEFDYYINAIDTHFYINSQRICDIDDW
                     NEMLDKIREEMTPAKLVA"
     gene            19338..19598
                     /locus_tag="PXD69_001325"
     CDS             19338..19598
                     /locus_tag="PXD69_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283528.1"
                     /translation="MTFELGRVCATRAVAECFNQHTLVDLLHRYCSGDWGNLCDNDKK
                     ANVKAIERGGRILARYDVEDETLYVITEADRSYTTILFPYEY"
BASE COUNT         5696 a         4175 c         3995 g         5922 t
ORIGIN      
        1 tcagttgtat aattcgttct gctaatgatt gaaattcttg gtcaaaattt tctttacttt
       61 catccattgt attcaaagca tgtccaaatt gacctgagtt tttaatttgc tcttttgtta
      121 aggaaaatac gggaactcgt agctcttggc taatagcaat caacgaatta aagtcggcta
      181 tgtgagccaa atcaaatggc tctaagtcag aattcgttga tttaagagca gcataaatag
      241 ctgtatcatc aatagcacaa tcaatagttt ttaataccgg cacaaaattc gtaatgactt
      301 catttctaat tcgctcaatc catttttcaa atgatttggc cggttgccct tttcttggtc
      361 gataacgttg ctgaatagta cctaaaaatt gtggcttatt tttaattgca taagatgatt
      421 ggttaaaacc attaagttct ttaaatgctt ttaactcatt atgccatttg cgaatatttt
      481 tagcgagcga accaactgct tgccagcaga aaaaatcagg tgatgtaggt acaataaagt
      541 aatcactaga cattaggata acttcattta atccacccac atttggacta agatcataga
      601 gtatgtaatc aatattgttt tgttcagcta ctttcttaat taaagtcgga agattgccgg
      661 gtatatttct tgttgctgga acaccggcag caatttttaa tgatacacta atttgcgaat
      721 caagctcgga aacattaagg tgaccaggta acaagaacag atttggattc agggtttgag
      781 tgatttggcc aacatttcca ctaaggtagt tatcagggct ttgtccgttt atcagtgctt
      841 caacaatacc ttccatagtc aaatgatgtc tattattgta aaaaagcgct aaatcactat
      901 cttctttgca ttgatcgtag ccaagtacca gaccggttag gttacattgt gaatccaaat
      961 cgactaacaa tacttgatag ccttgatttg ctaaactcca accaacatta aatgcagttg
     1021 tagttttagc aatacctcct ttatgattaa aaatactgat agacttactc ataataccca
     1081 taattctatg aaataattaa cccaccgaac tcatttgaga atggtgggtt aatgctttgc
     1141 tttagctagg ctgcaaatcc agattttctc atcagtttgc gatcaaagtt gtggcgaata
     1201 ggcttatcgg aacgacattc aaatgatgta atatcatttc ctgttttaat atcctgaatc
     1261 tgaacacttg cttcaaaagg tgatttaggg tctgcttcta tatgacctac aatataagat
     1321 tttcctgcat ttcttaattc gagcgagatt gttgtgaatt gtgaaccacc tgcaatctcc
     1381 gatgccggat ttttgagagc ttcttttaca ggatttttga atgtggtatt accgtgagag
     1441 tacacatagt ttcccccctc tttggtaact tttaacgttt ggttatctgt agttgtgcaa
     1501 gaatacacta cattgttatt tgcaaaagca ttcattgaga aaaatgctga taaagctaca
     1561 attgccattt ttttcatagg ttagtttcct tttggtgcgt tgataatgta atcggcttcc
     1621 tggttacgtc ttcgagcatt aacaccatta ttatgccctt gtaaatttcg gattgagtta
     1681 gctaaagccg tcatatcacc tgattgtgcg gagacggcag ccgctttttg aacactttct
     1741 agtttagata atgacccata gttgtatgat accgacgtta atgctgcttg tgcttgagga
     1801 gtcaatttag cccaaacgtc ggcaccaaca ttaccccttg caacattcat aaattgaggc
     1861 attcttcgtg ctaaatcacg ttcagcatct tcccggctta cataagtgcc tttttgaacc
     1921 cgatgaacca taccatctgc agtagtatag gtgtcagagc catatccggc acggttagca
     1981 tttacatccc atttcccgtg gcttaaatat ccttcaaact gtttgataag agccgttgct
     2041 tgttcattcg cattgccgtt catttgggca atttgggtat agctccctac attcacgtta
     2101 ctgacaatgt ttgttgggga ggctttatat gctccataaa aatcactcat gcctgagccg
     2161 tctgatttgg ggatagcaat atatctatcg ccaacggcat tttgtgcaga attagcaatg
     2221 ccactggtgt tgagattatt tgctccggct tgattgctta aattggcaaa gcgacggttt
     2281 ccatcaccca tcgcattatc atcaatagca agagcttgtt cgttcatctg ttgagtaatt
     2341 gcagctaatg ctgtattacc gttgattgaa cgttgcagtt ccatttcgag tttaacttgc
     2401 tcaatttctc tgtcaagtaa tttgaggttt ctttctgctt cttctactaa ggaagatttt
     2461 ataacatttg gctcacgcat accggctaac attgctcggc gaatcagtag caatttttcc
     2521 atttctttag aaatagctaa ttcttgcgat aaccttgcac ccagcaaggc tgcatccggc
     2581 gaagcagcaa tggcttctaa tacgcctttt gttacactga ccgttgatgt actcagtgaa
     2641 ttgagttgtt ccggcgttaa actatctaag tgattcagtg ccgcttctag ctttgtggct
     2701 ttttcaatag ttgtttgttc aataaaatgg gcgattcctt tcccggcttt agctccactt
     2761 gaactttgtt cacaagtttc acaggcatca aggaatgttt caccaatcac ttcacttgca
     2821 taggcagcag cctcgcttgg atttttccat tccgtacaaa gcataccatc acagcttgca
     2881 ataggtatat ctcctttttc taatggtcct cgtcctaaag cgaggttata tccggctcca
     2941 acaatgtcag caacgatagc cattggtttt tgatttttac caccacgttg ttcgccacct
     3001 acccaaggga tgcctttttc agcatctttt ttatccattt tcttcttggc tgccattgca
     3061 tcaggctctg tttcagcaat ttcagcggct cggtgtaatc cggccatctt tgctaattta
     3121 ctgtccattg ctaaatcagc aagttggtta gacatggctt cgcaactggt tttgaagttg
     3181 ttgaagtcaa gttttccttg atatagacca ttagaaagaa tgtcatacag ttgaggattt
     3241 gctcgttgga taatcatcgc cgggaggctg gcaactgcac cggttgctga ctcaataata
     3301 ttgccataaa gatctttaaa accttcagta ataccattaa gctggttttt aatggaaagt
     3361 ttaatatcaa agttgccaca agttaaattc gatttccagc caatgccaat cccatattga
     3421 tttggtctgc cacgggaagc tggtgcggaa atggcactac ctcctccaat ggagtagtgc
     3481 atataatcag aaaggacagg gtagtattcc gtgagagcgt tattaccaga aacgcctaga
     3541 ttaccagtcc tatagcctgt tgtattttca ataaaattac taatgctatt gccaacatta
     3601 acggtattac tatttgcgta tccgctcatg gttgtgagca ttatacaagc ggttagaaat
     3661 ttgagacttt ttgctttttt catttattta tcctaatagt gctgataatt taatgagtat
     3721 gtgtactttt ccagtccaca tgacctaaaa aaacttgccc ttgtttttta cagcaagaat
     3781 agggcctcca taatgcccag ctgtaattct cagtattgga gaaactatct gaatgggtag
     3841 cccaatcacc actgtgcgga aagactttag ggtaggattc ggaagtaaat accttaactg
     3901 ttacatctga gggtttatta gcaggactag cacttgccat agctgaaagc agtagtagtg
     3961 gtaaatagta aaatgtctta gcttgcataa atgctccaca aatagagtaa ttcacgttta
     4021 ccttaaaaga tgatttggtt agaagaaatc ggaaattgtt ttttggtttt ggagagtttt
     4081 tgttagtata taagttaatg taacaaggga gagtggatgt atgagcaata gaatacctaa
     4141 agcctgttat gcttacccaa aatcgccgaa caacccgttt aatagattgt cggttatcaa
     4201 tctataccag ccgaaatgtc tcccagcatt ctgaaaggga actctgtaaa attacaggaa
     4261 tgccacctaa acaataaatg gataatgcca gccactttat ccgttgtatt ttgtcacatg
     4321 cgtgattgca atgtcataat attacccgac ttggggatat tatgacattg caatcattgc
     4381 tcacttttct tagcctgagc ccacaggtga ataaagggtg ccgtttgtgt cctcgatgat
     4441 gccacagata tgccgattaa agaccacaag gtaatcgggt aaattacgaa cgaaaatatc
     4501 aacattgtca cgaaggtgct gctattttca atatagtaac ttatattggt ctaacttaaa
     4561 tttcatttat tcttcaaaag tacaacaccg ttggtaagtg atttatcaac ggtgttgtca
     4621 tttccaattc tctaaaatca aaattcaatt ctcaattaac tttatgattc aatatgacta
     4681 aattatcctc aatttaagac gctgtatata acagcactta ataagtcgca taactcctga
     4741 gaagcgacgg ctatccttag aggtagttga gttattgcca aaatgtctcc tagcattctg
     4801 aaagggaacg ccacttttgt gggaatgcca cctaaaccct ctaccatctc agtgaagcat
     4861 cattgagatt tcattttact tccacctcgc ggggaacatt tttcccgtgt tgggcaagga
     4921 tgtttctccg cttttttaca tttggagaaa caaactatga caactcaaac ttctactcaa
     4981 aaaaattact tcaaccttca tacaacaggc attggctatc taaacgatat tcgtttggta
     5041 gagcctaaaa aaggaaatcc tttttatgcc tgccgtatag cagctctggt tggcgaatct
     5101 gactctcctg agtacagata ttttgatatg aatgtagtcg gtaaagagac tgaaacactt
     5161 atcaaaagat gccaaaaagc agttagtgaa gagaaaaaag tgcttgtgtc atttgtaatg
     5221 gctgatttgt ggttcgatac atttacttac tcaacagata gtaaattcca caaaaaaggc
     5281 gataccggtg tatctgtaaa aggtcgctta atccgcatca aaatgattaa aattgatggg
     5341 gaaatagcct accaagaaaa gccaaaatca gatgagcaat ctgagtaatt ttacctaagc
     5401 ccgacatttt atgttgggct ttattactcg atgtacaaga tttgcgcgta acttttaaga
     5461 ccccagatgg cgatgttact gccgtcaatg atctgacttt ttctttaaat gccggtgaaa
     5521 ccctcggcat tgtcggcgaa tctggctcag gaaaatcgca aaccgctttt gctctaatgg
     5581 ggctattagc agataacggg cgaatttcag gatcagcaaa atttaatgga caagaaattc
     5641 tcaacttgcc tgaaacacaa cttaaccgct tgcgtgctga acaaattgcg atgatcttcc
     5701 aagatccaat gacctcgctg aacccttata tgaaaatcgg cgaacagcta atggaagtac
     5761 tgatgttgca taaaggcatg gatcataaaa ctgcgtttga agaatcggta cggatgttag
     5821 atgcggtgaa aatgccggag tcacgtaaac gtatgaatat gtatccgcat gaattttccg
     5881 gcggtatgcg tcagcgtgtg atgattgcga tggcattact ttgccgtccg aaactcctca
     5941 ttgcggatga acccacaact gcgctcgatg tgacggtgca agctcaaatc atgaccttat
     6001 taaacgaatt aaaaagcgag tttaataccg ccattatcat gattactcac gatctcggtg
     6061 tggtcgcagg aatttgcgat aatgtgttgg tgatgtatgt aggcagaacc atggaatacg
     6121 gcaccgctga gcaaattttc tataccccaa gccaccctta ttctatcggc ttaattggtg
     6181 cagtgcctcg cgttgacgga caggaagaag aactcattac tattccgggt aatccaccta
     6241 acttattacg cttaccgagt ggctgtcctt tccaaccacg ttgcgttcat gcaactaaac
     6301 agtgcctcaa agcaccggcg ttaaccttgt taaatgatca acgtttacgc gcttgttttg
     6361 tccctgccga gcaattaatc cgaggtaacg catcatgaac acagagaaaa aagtgatcct
     6421 agaagtgaag gatttaagcg ttcatttcaa catcaaagat acgaaatctt tattctttgc
     6481 taaacaccaa actttaaagg ccgtcaatca tgtctctttt cagttatacg aaggcgaaac
     6541 cttaggtgtg gtcggtgaat cgggctgtgg aaaatcaact ctcgcacgcg cgattattgg
     6601 cttagtggaa agctctggcg gtaatatttt atggctaggt aaggagttaa ctcaacaaag
     6661 tgcgaaagaa tggaaaacga tccgtagcga tattcaaatg attttccaag atcctttagc
     6721 ctccctgaat ccacggatga ccattggcag tatcattgcc gaaccattaa aaatttacca
     6781 accccattta accgcggaag aagtgaaaga aaaagtacgc gcgatgatga tgaaagtggg
     6841 cttattacct aacttaatca atcgctatcc acatgaattt tcgggtggac aatgtcagcg
     6901 tatcgggatt gcgcgcgcct tgattgtgga accaaaactc attatttgcg atgagccagt
     6961 gtccgcctta gatgtttcaa tccaagcaca agtagtgaat ttattgaaat ctttacaacg
     7021 cgaaatgggg ctatcattga ttttcattgc acacgacctt gctgtggtga aacacatttc
     7081 cgatcgtgtt ttggtcatgt atcttggtaa cgcggtggaa ttaggtgact atgaacaagt
     7141 ctatcacgat actaagcatc cttataccaa agctttgatg tctgcggtac cgattcctga
     7201 tccgcaatta gaacgcaata aacaaattca attgcttgaa ggcgatctcc cttccccgat
     7261 taatccgccg tcgggctgtg tgttccgcac ccgttgccca ctggcagatc aacactgtat
     7321 tgcagacaaa ccgctcctca aaggacgaga taatcacgtt gttgcttgtt ttaaagccga
     7381 gtaatacaca caaccgcaca aaaaagtgcg gttgtttttt tgcgaatatt cacagtcaga
     7441 ctttcgtgat actttcgctc tgagataagg attacgatac agagaagtta ttcaacaatc
     7501 acacgtgcat tgatcggttg cactggacga ttattgtgtc ctttcatcaa ggtcgcaaac
     7561 gcctcaactt gagattggct aatgttgtca tagtgtttta acactaacca atttacacct
     7621 tcagaacaag gtggtgtagt taatgacccg ctgaaacgat agtaatcgcg ttttttcgga
     7681 attaatgttg ctgggtcaaa agcggtacta agcgtatatt tctcccctgc tttttgcggg
     7741 aagttttgcc aaattggggc taaccattgg ttttcacttg ataatacata gagcacgcca
     7801 agcacagcaa gattcccttc attgtctgcg tgtacaaaat gtgcttccat cgggaaggat
     7861 ttacctcaaa ttaagttttc actcggcaca tggaaatgga attgtttaag ggtaaaagtc
     7921 tttccattaa gctgcatgcg attacttgcc tctttgaaat ccacttgaat agtatgccca
     7981 ttattgacaa tctccacatt ggaaggtcga taatccagct taatcggcgc taacttacca
     8041 tcaatcgtat gcttgatatc tattggtgtt tggtttttac cttcgccaca aatacggaat
     8101 ttgggtgaaa gttcagccca atgttctggc gattcgtgtc cggtgtatcc ccaatgcgtg
     8161 tgcgtttctt ctttcttaag ggggcttgta cacgctgtca atgctaatgc acctaacgta
     8221 agcacaaaaa ggtttgattt tttcatagcc tagctcctga ttaaaagaga tgaattgatg
     8281 agacaaccta aactcaatga tgccttaatc cgagacgctt tcatcttagg caaaacaaca
     8341 ctccatttca agtataactt gctcaagaat atatcttaga ccgaaatcaa atccattatt
     8401 tcaaataagg tattaggcga gtatttctct aaataacgac gtaaaaaatg ttgtgtttct
     8461 tggctaatga cttgatctgt ttccggatac aagttgtata tcacagcatg cacacttact
     8521 cttttggagt tgagtacttg taaactcaat aaggtatgat taatactacc tagcttgcca
     8581 gaggtaacta aaatcacggg gtattgatgc tgacaaagat aatcaagggt ggtttcttcc
     8641 tcattataag gtacacacaa gccgcccgcc ccttccaata atacataatc atatttttca
     8701 cacaaaagtg cggtgcaggt ttcaattttt ttacgttcga tcgtgcgcgg ttctaatttc
     8761 gcggctaaat gcggtgagca aggataatca aacacgtaag gacaagtgat accttgctta
     8821 tcttcttctg taagctcaat accttgtatt tttcggtgta tgagtaaatc ttcggcaatt
     8881 cctcggcagc ctgtttggat catcttttgc gtgatgacac ttgcgccttg ttgcatcagt
     8941 ttcttggcgt accaacctgt ggcgatggtt ttgccaatat cggtgtcgat gccagtgata
     9001 aaaaaaacct ttgccatact ttttccttct aagattaagt taaacgcgcc agcacataca
     9061 tcggcgtgta agtgagttct actttgtgtt gtgcgttacg gtaatgttgt tgatattgtt
     9121 ggcaaaaggc gtgcaattgc ccttttgtcc acctttgctg ctgtgtggca gtaacgcctg
     9181 tttgtttcaa atgttttaac accgctaagg gatcatcaaa gtgcaacaca atctcctcgt
     9241 gttcgagggc taaaatctca aattcaggca ctagccactt ttgccagtcc tcaagacgtg
     9301 gataagttaa ccccacaccg gtgaggtgtt tgatctgtgt taaattctcg ggcgtgaaag
     9361 tactgaataa caaaaatccg tgctttttta agcgcacttt acaacgcgca ataaaacccg
     9421 ctttatcttc aaaccattgc accacggaag cactggcaat caaatcatac tgctgcggaa
     9481 agggaagttg ttccgcatcg ccacaatgga agtgaaaagg ttggggcaac actgattgca
     9541 gatgctctcg catatcgcaa aggtcattca gctcccagtg ttcaacctgc aactgtgaca
     9601 ttaattgctt cgttaatcca ccagtaccac atccaatctc taatgcacgt tggaatgctt
     9661 gtctgtcgat atacgacaat aaactaagca aacgttggtg aatctgctgt tgtgctctcg
     9721 cttgctgatc atagttcgat acagcggcag aaaaacgctg tttaatgcgt cctttatcaa
     9781 tacgatccat gtgctacaac caacaagttt cccaatgggt gaagtgagga aacaacaaat
     9841 gctcccctgc gatttctgtt attgcacaac gatcctgcca ataagcccgc tgattttgtg
     9901 cagggaaaat tttatctttt gagccgacaa tcgccttgct ccacgagatt aaatctgtac
     9961 ggtgatcttg ttgtaaaaag gtataaagtg cggtcagttc agcatgaatt tcctgtaatg
    10021 tgggacgcat ggaatagtgc tgataatctc ttaacagcgt ttttgaacca caaatacgac
    10081 gttcaaattt agtccgatta tcttcattta aaccagataa cgtgccagca aaaatggctt
    10141 cgggaatacc atattggtca tcacaaggta agcccgtgcc attgatcgcc gtagcagata
    10201 gcagtggata accttgcatc acacgctccg ctacccacac gcccattgac catgccacca
    10261 cgcgaatatg ttgataagcg gaaaaatcaa catcgcaatg cagatctcga taatcatagc
    10321 aaaggcataa atcataattt tccggcagaa tcaggtgctc gaccacgctc ggcggtgtgc
    10381 cccaccctgc aaaatagacg atcagattgt cgccttgctg tgaaatatgt tgtgttttca
    10441 ttcagcaagc tcccgtaaac aagcaataaa ttgttccact tccgccactt gcatatctgc
    10501 agtcagtgaa aaacgaatac gagaggttcc ttttgggact gtcggcgggc gaatcggtaa
    10561 gcaataatag ccttgttgtt gcaaacgttg cgccgttctt actgtcagtt cgttatcgcc
    10621 caaaatataa ggtacgatac aactttcact tggcatcggg acttgaaaaa tgtcaacaat
    10681 cgcttggcgt aaatgttgac taagctgagc aagatgtgcg cgttcggctt gcaaatgtgg
    10741 taattgttga aagacaaaat gcgtccatgc cacattaaac ggcggaagtg ccgtggaaaa
    10801 aatcaatggg cgcattttat taaccaaata atctcggatc acttgatcgc aaatcacata
    10861 agcccccata gagcccaacg ccttgccaaa cgtaccgact aaaatatcaa tttggttgat
    10921 acagccttgt tgttctgcta accctagccc cttctccccc aatacgccta tcgcatgggc
    10981 ttcatctaca tataacatca cttgcggata gcgctgtttt aatgcgacca actgggtgag
    11041 gtctgcacag tcaccatcca tactaaacac ggattccgtg accacgataa tccgctcaaa
    11101 agtgcgatca tttttttgca aaatttgttc aaggtggacg taatcatgat gacgaaaacg
    11161 cacaaactca cattgtgcca agcgaatgcc atcaatcata ctggcatgta ccagtttatc
    11221 cgccacaatc agcgtttttt tgtccgctaa agcaggcaaa atcccaatat tagcatgata
    11281 accgctatta aatagcaagg cagtttctcg tccaaatgcc tgcgccatta agctttctag
    11341 ctcatcataa atcggaaaag agcctgttaa taaacgggag gaagaagaag tcaatgcagg
    11401 gagttgatct tggtattgcg tgaaaaatgc ctgacgcaag gcttcgttat tggctaaacc
    11461 taaataatca ttggaggaca tattcagcat cgtattgtcc tcacgttgaa taaaacgccc
    11521 tcggtgaatt agttggggca gttggcgaaa ttgattctgc gcctttaaat cagctaactg
    11581 ctgctgataa tacctgatca tagagattcc ttatgtgcat attcttcttg aagggtgcga
    11641 attgtgccat gaattaattg agacaattga tccgatgaga tgatatacgg tggcatcaaa
    11701 tacactaatt tgccaaatgg acgcacccaa acgccatttt gcacaaagcg tggtggtaaa
    11761 cttgccatat tgacaggcgc cttcatttca atcaccccaa tcgctccaag tactctcatt
    11821 tcagcgacac aatctaaggc ttccgcttgg cgcaattctt gacgtaattg ctgttcaatc
    11881 tgttgaatac gttgttgcca agggcttgcc aataacaatt tgatactttc tgctgctacc
    11941 gcacacgcca gtggatttgc cataaacgtc ggaccgtgca taaaacattt tgcctcgcca
    12001 gaacaaatca cgtctgctac cgcttggttg gtaatggtag cggatagagt taaatacccc
    12061 cccgttaaag ctttaccgat acacatcaca tccggcacga cattggcatg ttcacaagca
    12121 aataatttgc ctgtacgccc aaatcctgtg gcaatttcat caaaaatcag caaaatgccg
    12181 tacggttcgc ataaggcttt tgcttgcacc aaatactcag gggaataaaa atacatacca
    12241 cccgcccctt gcactaccgg ttctaaaatt aaacccgcaa tctcatcacc atgttgtgcc
    12301 aataaatcct gtaacggttg catcgcttcg ggttgccaag cttgcccaaa ttttaccggg
    12361 ggttgcggta aaaaatattg cacgggtagc cctttggcaa acaagctgtg catgccggtc
    12421 acgggatcac acacggacat cgcatgccaa gtatcaccat gatagcccga acgaatcgta
    12481 gcaaatttat agcgctgtgt ttcgccttta gcatgttgat attgcactgc cattttcatc
    12541 gccacttcca cggcgaccga accactatcg gcaaagaaaa ttttatccaa actttccggc
    12601 aagatgttga ccagttgctg cgccagttct accgctggtt ggtgcgttaa tccaccaaac
    12661 atcacatgac tcatttgact cagttgttgc gtggcagcgt ggtttaaacg ggggtgatta
    12721 tagccatgaa tcgctgacca ccacgatgac atgccatcaa tcaactgctg accgtttttt
    12781 aactggatat acacaccttc ggcacgttct actgcaaata agggaaaatc cgcatttaac
    12841 gccgcataag ggtgccaaat atgttgtcga tcacattcta aaagttgctg ctcattcatc
    12901 gtttcacctc ggttgtgaat cgccctttca actggcgtaa attcacgcaa atacttacat
    12961 aaacggaata acttgttata atcgccaagc atttggcttt tcaagcccat tattctaact
    13021 taaaaagatg atttattact atgaatatat tagaaaaaaa agcacaactg agttactggc
    13081 aacggattaa aattgccttt caatatgtga tgccacaact ttatttaaca cgtcttgcag
    13141 gctggtttgc aaaacagcaa tggggtgctg tcacacattt tgtgattaaa ttattcgcga
    13201 aaaaatacca tgtggatatg agtgaagctg caaaaccaaa tttcagcgac tatgcgagct
    13261 ttaatgaatt ttttatccgt ccattagcgg acaatgcccg tccaattaat caaaatccta
    13321 ccgcactttg tttaccggca gatggtcgta ttagtcagtt aggacacatt gagcaggatt
    13381 tattgctaca agccaaagga cattatttca gcttgaacga tttgttagct ggcgacgagg
    13441 cgctcgctca tcattttaaa gatggcgaat ttgccaccac ctacctctca ccacgcgatt
    13501 accaccgtgt gcatatgcct tgtgatgcca ccttatgcaa aatgatttat gtgccaggtg
    13561 acttattctc agtcaatcca tttttagccg aacacgtgcc aaacttattt gcacgtaatg
    13621 aacgcgtgat ctgcgtattc gataccgaat ttggtaaaat ggtccaaatt ttagtcggcg
    13681 caaccattac cgcgagtatg agcaccgtgt gggcaggtgt gatcaacccg cctcgtccag
    13741 aaaaaatcac cacctgggcc tatgaaggag aaagtgcggt caaattactg aaaggacaag
    13801 aaatgggagc ctttcaattg ggctcgacgg tgatcaattt atttgaaaaa gatcgtgtgc
    13861 aactggcatc tcatttacaa gtggatagcc cggtacgtat gggtgaaatt cttgcccacc
    13921 aaaaataatt tttaaccaca ataggaaaaa caatgagtca acaatttttc gaccaagtgt
    13981 cattagaaag ccaacttgaa gtgagcgccg aagccgtcgc gaaagggatc tttgatgtgt
    14041 taaatcaaaa tccaccagca cttgagttaa atgaagtgag tcatgcccta cagactttgc
    14101 aacaacaagc gaaattcaaa gaaattgaag ccgttggtgc acaattctta gctgaaaacg
    14161 cgcaaaaagc gggggtaaat actacggaat ctggtttaca gtatgaagtg ttagtggctg
    14221 gtgaagggca aattccggca cgcgaagaca aagtgcgtgt gcattacact gggacattaa
    14281 tcgacggtac cgtctttgac agctcagtaa aacgtggtca acctgcagaa ttcccagtaa
    14341 atggcgtgat cgctggttgg attgaagcct tgtccatgat gccagtgggt tcaaaatggc
    14401 gtttaaccat tcctcacaac ctcgcttatg gcgaacgtgg tgctggtgcc tccattccgc
    14461 cattcagtac cttagtgttt gaagtcgaat tattagccat tctttaaagc taaacgctag
    14521 acataaaaaa gtgcggtcat tttccgcact tttttatgtc tagcgtttat cgtttcaagc
    14581 cttgctgata gccgctgttc cacgaatggc ggaacttgtc cggcacagcc ttgcccgttt
    14641 gttcttcaca gtaagccgtt cgttgaatca acattttttg ttggtgttct cgaaatgatt
    14701 ttcccacacg atagccgtcc aaataccaat catcattatc ttgacatgcc atggtattaa
    14761 tccgttttgt attccccgtc actgcaaaag atttgcctgc ctcaatacgt tgcaccgcat
    14821 gttcagagta tgaagcacag ctcaccagcg aacctagtac actgaatatc aatactgctt
    14881 tccaattcat cttgttacct ttctttttct gatttataac acaatcatat cgtctcggtg
    14941 taccgcaacc gccccatatt cataaccgag aacctgttcg atatcttgcg aatgtttgcc
    15001 ttgaattaaa tggagcgcat cgctgttata acgtggcatc cctaaggcaa catccttgcc
    15061 ttgctgagta cgaattttta ccacttcacc gcgtgaaaag cgcccttcca cgtttacaat
    15121 cccagcaggc aataacgatt tatgttgtat taacatcgcg ttttccgccc ccgcatcaat
    15181 ggtaataata ccggctgacg gcgccgcata tagccattgt ttacgacttt ctaagcgatc
    15241 tgcttgcaca ctaaatttgg tgccaatggc ttgcccataa gctaagtcca caatcacatt
    15301 cgggcgatta cccggtgcaa taatggtttc aatgccggag cgggttgcca catccgcggc
    15361 actgattttg gtggacatgc cacctgtgcc taacgaggtg ccacttccgc ccgcaatcgc
    15421 gcgaatatga tcggtaattt tgtccacgtc ggcgatcaat ttggcgtctg gatgtttgcg
    15481 cggatcacga tcaaataaac cttgctgatc agtaagcaaa tacaactgtt ctgcttgcac
    15541 caaaattgcc actaacgcgg ataaattatc gttatcgcct actttaattt ctgacgtagc
    15601 gacagcgtca ttttcattaa tcactggaat aatctgattg tctaataagg cgcgcaaagt
    15661 atctctggca tttaaaaaac gttcacgatc ttcaatgtcg gcacgggtca ataaaatctg
    15721 cccaatatga atatcataaa tggcaaacaa tttttcccac gtttgaatga gctgactttg
    15781 tcctaccgca gccaataatt gtttcgaggc aatcgtcggt ggcaattgcg ggtgatttaa
    15841 ataatgacga cctgccgcaa tcgcccctga ggtaacaatc actaaacgaa agcccgcttg
    15901 atgaagctgt gcgagctgac gcacaatatc tatcatatga ggtaaattta acttcgccga
    15961 tccttgcgta agcgtactgg ttccaaattt tacaacgagt gttttgtcga ttttcatctt
    16021 ctctatcttc ttatttttgt cgcacaaaat tgaagctaac ttaccattaa tcatcagaaa
    16081 aatcatctcg tttacttgct attttctatg atttagcaca aattttttct cactaaaagg
    16141 catataataa agcttcttga tttttcagct aggaacccga ttatgacctc aacctcttca
    16201 caagaaacgg agcggcaacg agaaatcact cgcctttgtg ttcaagttgc ccaactctta
    16261 tacaacatgg tgcagaaagt gccatcgttg tgcaaatggc acatcgctta ggcttagccc
    16321 tcggtgtaga tagcgtagaa tgtgccctca cgccaaatgc cattattctt actacattag
    16381 cccaagacca ttgcatcacg acagtccgta aaaaccaaga caaaggaatt aatatgcaag
    16441 tggttaccga agtgcaacgt attgtgatta cagcagaacg taaaatctat gatatgcaac
    16501 aagtgcatgc caaactggct cgcattaaac cgcttaaata caatcgctat tttgtgatgt
    16561 tgatgattgg cgtatcctgt gccagttttg ctcatttatc tggtggggac gcactagttt
    16621 cattggttac atttctcgcc gcaacactcg ccatgtatgt tcgccaatca cttgccgcaa
    16681 gacactataa ccccttaatt gtatttgcgg tgaccgcctt tgtcgcctca ctaattgcgg
    16741 gtatcgcgtt gaaatataac atcggcaatc agccccaaat tgccttggca tccagcgtat
    16801 tattgctcgt tcccggcttt ccactgatta atgcactcgc cgatatttta aaagggcata
    16861 tcaatatggg gattgcccgt tgggcactcg cgacaatcct cacatttggg gcatgcttag
    16921 gcattgtatt tgcgctgagt ttattcttag aggaaatctg tatgctaaat aaattcattc
    16981 aagatgaatt tctacggcta gatcaacgtt atgcagcttg gtatcaaagt gaagaaacgg
    17041 atgaagttgc cagaatgggg attcaagaaa gtgagcggat tttgaaaatt ctgtatgcac
    17101 tgaaatataa cgaagaccct atgcaaaatg gtttaggcta tattgcattt atggcatcaa
    17161 aaggccaata atttacttat ctcaacaatt tacccaccgg ggaaactcct cgatggcgtt
    17221 tcccctactt tataggagaa acgctatgac tattaacact tatgcaaaat ttgcacctac
    17281 cgtttttgtt gcaaaatgct ctgaatcaca taccaaaggt gaaattatta cgctaaccag
    17341 caaatatggt aatgaaaccg aggttcaagt acataatctt gttaaacaag atggcgagca
    17401 ttatttttat tcatttactc gttgtgatgg gatggatagt cagtcatttg ctcaacaaaa
    17461 agcagaacgc tatcaaggct atgcagataa tgcagccaaa cgtagtcaag attgggtaaa
    17521 tgccgctaat gaggggtgtg attttttgag tttaggtgag ccaataaaaa ttggtcatca
    17581 cagcgaaaag agacaccgta accttattga acgtaatgct cgccgtatgg acaatgcggt
    17641 tgcagaaatg aacaaagctg caagttatga atctcgtatc gcatattggg aaaaaatggc
    17701 aggaaaaatt gacctgtcta tgccggaaag tctggaatac tttaagtttg aattggataa
    17761 agccaaaaca aagcacaaag aattgaagga caaccccgag aaacgagagc atggttattc
    17821 actgacttat gctaaaaaag cagttaatga acttgagaaa aaagtaaaat tagctgaatt
    17881 actttgggca taattattta caaaggagat gacgatatga atcgacaagg tatttatatt
    17941 aatggcaaac aggtgtttga ttcacaaggc gaagatattc aaagcattgg attttttggc
    18001 tgcaatattc aaacggtcgt aggcataaac aaaggaagta ttttagtctc gtccaatagt
    18061 aatcaattat tggtgaatgg acagtcgatt gaattaggtt ctgagccagt cctcaaaatt
    18121 gaggttttgg gcaatgtgca gaaactgagt gccggtgccg cagatgtctc tattacagga
    18181 gatgccggca gtgttgacac agttagcggt gatgtctcta ttaagggaaa tgttgcctct
    18241 tatgtgaaaa ccgtgagtgg tgatgttcgc tgtcgtgcta ttaccggttc ggtggaaacc
    18301 gtctccggtg atatttatcg ctgatattta ctcatcttat tatttaccac cctattggga
    18361 agcaattttc ccaaggtggg cagattgttt cccattttta ttttgaattt ggagaaacat
    18421 gatgaccact attaaccttt cacaacaaga acgtgagtta gttgaatttg tctggaataa
    18481 ccgtaataca ccttggtttt ttcactgtag tgtatcgaat gtgtcgagaa ataatacctc
    18541 tcggcaaatt gctgtatgtg tcattaagga taatcaattg attagccttg atgaattgat
    18601 agcaaaatta tgtggttata aactcagaca aaacggatta tacgttactg ttcataatat
    18661 ggatgctgtt tttgatacct tatatcgctt tatgtgcaag ctaaatgatg agatggaggc
    18721 aaatgaaaat gtttgccctt atttatcatt agctcactat gaagtgtttt gattggtatc
    18781 agaactatcc accctgtcgg gaaacaattt ttccgatagg gcagattgtt tcccactttt
    18841 attttgaatt tggagaaaca taatgataga cacctttttt gaccttgacg acacctcatg
    18901 ctatttaggt aactgggagg atatactgaa agaatatgat gattgtcttt cagttgaaga
    18961 tttttggcat tccgctaaag aatttgatac cgtacctcat tttggcaacc tataccagga
    19021 gcgtgtcatc cttaagttga ttgctcgatt ctgtattgag ctgaatattg agcaagattc
    19081 aggtttagtc gaatttgatt attatatcaa tgcaatagat acgcatttct atattaatag
    19141 ccaaagaatc tgtgatatag atgattggaa tgaaatgtta gataagattc gtgaagaaat
    19201 gacgccggct aaattagttg cctaattttt gcaaattttt actaaaaatg acgcttactg
    19261 tcgtcttaat tcacccactt ggggaaatat ctccccaatg ggatgacatt tcccctcttt
    19321 ctgtttagga gaaatgtatg acttttgagc ttggtagagt atgtgcaact cgtgcagttg
    19381 ctgaatgttt caatcaacat acattagttg atctacttca tcgctactgc agtggtgatt
    19441 ggggaaattt gtgtgataac gacaagaaag ccaatgtgaa agctattgaa cgcggaggac
    19501 gcattttagc tcgctatgat gtggaagatg aaacacttta tgtaatcaca gaggctgatc
    19561 gtagttacac tacaatttta tttccttatg aatattaatg gagcttccat ttatacccta
    19621 catttttatg ttatcaaacg ccgtcaaatg atggcgtttt tctattttat atctttcgat
    19681 tttatagttg tttcaatatg caattttaat tatttttcct ctttgtagaa caattacaaa
    19741 tgaattaagc atggaaaaac aaatatataa cagaagaaaa acattatt
//
LOCUS       DANLXO010000045        19364 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.045, whole genome shotgun sequence.
ACCESSION   DANLXO010000045 DANLXO010000000
VERSION     DANLXO010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19364
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.045"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(53..1093)
                     /locus_tag="PXD69_001326"
     CDS             complement(53..1093)
                     /locus_tag="PXD69_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6283529.1"
                     /translation="MQTTLSPQQIAKKHRTIEKKRSFLLLFFLLICLLSLIFDIMTGP
                     SLLPFNEVWKALFQLGEIEETTKVIVYELRLPMAIMALVVGAALGVGGAEIQTLLNNP
                     MASPYTLGLAAAAGFGASIVIAFGGFGLPTEISVPVGAFVMTLFSSAILFAFSSLGRF
                     SSAILVLVGIALLFLFQSLLSLVQFISAPEVSQQILFWLFGNLTKATWQTISIAFGVT
                     TVCILLLFKDAWKLTALRLGEARALSLGINLTWLRMKTLLIVSVMTATCISFVGIIGF
                     IGLVAPHIARMLLGEDQRFFLPGSMLVGAAFLSMSSVLSKSLVPGALFPVGIITALVG
                     VQFFFWIVLAKR"
     gene            complement(1182..1772)
                     /locus_tag="PXD69_001327"
     CDS             complement(1182..1772)
                     /locus_tag="PXD69_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein phosphodiesterase"
                     /protein_id="HDL6283530.1"
                     /translation="MNFLTHSLISLEIDTQTKQQTLYGNFAGDFYKGLIPHLNLADNL
                     KSGVVLHRSIDKISDRPDSLTTQLLQGTFGRYKGIVSDIMIDHFLAKHFQRLFAKDLN
                     EVQAQIFQQIEQQRTIFPEQFVPMFNWLQSRKALTHYADLDFLEQVFLGMSSRVKKGE
                     ILRNAVTEIWQNYTLLEEAAIQEFFTVKDRATRELS"
     gene            complement(1773..3146)
                     /gene="modF"
                     /locus_tag="PXD69_001328"
     CDS             complement(1773..3146)
                     /gene="modF"
                     /locus_tag="PXD69_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HDL6283531.1"
                     /translation="MVVDGNGSGKTTFSLALQGKISLYSGDYGNSFQHIQLLSFEQQQ
                     KMLEQIFKDRNNDSVSPDDFGLTARQVILNGSPKEALCEEYAHKLHIQHLLERPFMHL
                     STGESRKVLFCQMLVSEPDLFILDEPFEGLDQQSVQYWQQLIAELQSKMALVLIVNRF
                     NDIPDAANHIELLDNLSLILQGERAEIEQQAVYSQLKFAEENVNVPLPDSAAPLLSLP
                     ENINPFELENVNIQYGEKKILDNLSWTVQPKQHWWIKGPNGAGKSTLLSIITGDHPQS
                     YANKVRLFGKQRGSGETIWDIKKNIGYVSSQLHMDYRVNCSAMEVILSGFFDSIGVYQ
                     QVPNALQLKAMEWLERLNLSNVAKKPFRSLSWGQQRLLLITRAMVKHPSILILDEPLQ
                     GLDGINRKLVKQFIEQLVTNSQTQLLFVSHQDSDAPNCITHLFEFVPKGETNEFGFEY
                     HQTALGA"
     gene            complement(3264..4217)
                     /gene="fmt"
                     /locus_tag="PXD69_001329"
     CDS             complement(3264..4217)
                     /gene="fmt"
                     /locus_tag="PXD69_001329"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDL6283532.1"
                     /translation="MSKLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGK
                     KLQASPVKQLAEAHNIPVYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAP
                     KYGCLNVHGSLLPRWRGAAPIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEP
                     NETSASLYAKLAELAPLALLEVLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQL
                     PAVQLERNIRAFNPWPFSFLTLTVDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQ
                     IATQQGVLNITQLQPAGKKPMSVQDFLNGRADWFVSGTQLS"
     gene            4332..4943
                     /locus_tag="PXD69_001330"
     CDS             4332..4943
                     /locus_tag="PXD69_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDL6283533.1"
                     /translation="MEFFIPKADTIFEEEIKKSRFITYLRHTEGMEQAKAFWQELKIQ
                     HPHARHWCWATVAGLPNDSQQYGFSDDGEPSGTAGKPMLNYLLGSGLGEITAVVVRYY
                     GGIQLGTGGLVKAYGNGVQQALLQLERIRKVLRKNYRLQCEYEQFNTISHLISEKDIV
                     IVEQLFSDKVDLLLAFNPSEVEAFADELTQRFSGKLALIKEEI"
     gene            4947..6431
                     /locus_tag="PXD69_001331"
     CDS             4947..6431
                     /locus_tag="PXD69_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HDL6283534.1"
                     /translation="MQFFSIIRIVGILVMCFSFTMLVPATVALIYGDGGGRAFLEAFA
                     LNFMVGTLLWWLCRDNKNELRSREGFLIVVLFWVVLGLLGAVPFIILENPDLNVAESI
                     FESFSGLTTTGATVITGLDSLPKAILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGMQL
                     YRAEMPGPLKEQKMRPRIAETAKALWLIYLSLTILCAVAFWLAGMTVFDAISHSFSTV
                     SIGGFSTHDASIGYFNNAAISYITVFFLLLSACNFALHFAVIDRIRDAQSRKKGGILS
                     RLYWGDYEFRFFLMVQLGLFLVCTLVLVGYGYFDNTSVTIEQALFQSVSISTTAGFTT
                     NDFSQWSSFLPTLLVLSSFIGGCAGSTGGGLKVIRVLLLYLQSKREIHRYIHPNVIQP
                     IKLGNHVLSERVVDGIWAFFSAYFFVFVICWLATIACGMETFDALNAVIASLNNLGPA
                     LGSVSSNFTQVPDSAKLVLTFAMVCGRLEVFTLLVILSPVFWKD"
     gene            6432..6959
                     /gene="hemG"
                     /locus_tag="PXD69_001332"
     CDS             6432..6959
                     /gene="hemG"
                     /locus_tag="PXD69_001332"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HDL6283535.1"
                     /translation="MKTLILYFTTDGQTKKIAERLADVITHEVELISLKDQAVDFAEK
                     IANADQIVIGASIRYGHFNPLVYQFVEQHYPALNAKKTAFYGVNLTARKDNRNTPETN
                     TYVRKFLAKVKWKPTHIEVIAGALLYLRYKPFDRLMIRFIMKITKGETDTSKEYEYTD
                     WQQVENFGKLLANQL"
     gene            7091..7486
                     /gene="mscL"
                     /locus_tag="PXD69_001333"
     CDS             7091..7486
                     /gene="mscL"
                     /locus_tag="PXD69_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDL6283536.1"
                     /translation="MSILKEFREFAVKGNVVDMAVGVIIGGAFGKIVSSLVSDVVMPP
                     IGWLIGGVDFKDLAIEIAPAKEGAEAVMLKYGAFIQNVFDFLIIALAVFGMVKVINSL
                     KKAPVVEEAPAEPTAEEKLLTEIRDLLKK"
     gene            complement(7599..7862)
                     /gene="rpsT"
                     /locus_tag="PXD69_001334"
     CDS             complement(7599..7862)
                     /gene="rpsT"
                     /locus_tag="PXD69_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDL6283537.1"
                     /translation="MANIKSAKKRAVQSEKRRQHNASQRSMMRTFIKKVYAAVAAGDK
                     AAAQTAFVEMQKVVDRMASKNLIHANKAANHKSKLAAQIKKLA"
     gene            8126..9700
                     /gene="murJ"
                     /locus_tag="PXD69_001335"
     CDS             8126..9700
                     /gene="murJ"
                     /locus_tag="PXD69_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDL6283538.1"
                     /translation="MSKKLLRSGMIVSFMTLISRILGLIRDIVVATILGTGVSADIFL
                     FANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDPNKTREFIAKVSGTLGGLVTVVTL
                     VAMIASPVVAALFGTGWFLDWLYDGPNAEKFTQASFLLKITFPYLWFITFVALSGAVL
                     NTIGKFGVMAFSPVLLNVAIIAVALWGRDYFDSPDIALAWGVFLGGLLQFLFQIPFMK
                     KEGLLVKPKWAWKDEGVTKVRKLMIPALFGVSVTQLNLLLNQVIASFLITGSISWMYY
                     ADRLIEFPLGLFGIAISTVVLPSLSRIAKNKELTEIQRGEHFQNTMDWGVRMVLLLGI
                     PAMIGMAVLAQPIIMTMFMRGKFGFEDVLATSYPLWVMCLGLNSYMLISVLANGFYAN
                     QNTKTPVKVGIIAALSNICFGLAFAPFLGYIGLALASACSALVNVSLLYVNLSKNGYY
                     KVSHKTVLFVLKLFIAACVMGALVAYFTPEIELWALMTMWQKVYWLIWLMILAGGSYF
                     ASILVLGIRKKDFRSA"
     gene            9702..10169
                     /locus_tag="PXD69_001336"
     CDS             9702..10169
                     /locus_tag="PXD69_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HDL6283539.1"
                     /translation="MKSLKLKIPPPAWFLLCAALMWLVAQYVPVSLPNYQHTAIFFSG
                     LAVAIIGGAVAVSALWVIHQAKTTYSPFRPQHTAKLVTWGIYRKSRNPMYLSLLLGLI
                     AWALWLGAMLAWLVLPLFVWLITYFQIKPEEQILAQKFGTHYAKYCNQVRRWL"
     gene            complement(10234..12243)
                     /locus_tag="PXD69_001337"
     CDS             complement(10234..12243)
                     /locus_tag="PXD69_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDL6283540.1"
                     /translation="MDLIKKLNTGSTFRVPIFLPSLLFVSFVAVFCIIFPQQAQTSLD
                     TIKNSLFQHFSWFYIFAGSIFFLFLIFLSFSRLGDIKLGADTDEPEFGFGSWIAMLFA
                     AGMGIGLMYFGVAEPILHYLKPVQQNLTEPERMKEAMMTTFYHWGIHAWAIYGVIALA
                     LAYFGFRYKLALTIRSGFYPLLKHRISGFWGHLIDIIALCSTIFGLTTTLGFGVMQVS
                     AGFNNLGLIEQSNFTVLAIIVTVAMALAVLSAVSGVGKGVKILSEINLTLAGLLLIFV
                     IITGPTLLLFSSFTENLGYYFSSLLEMSFRTFAYEPEHQGWLSGWTVLYWAWWASWAP
                     FVGLFIAKISKGRTIREFILGVLFVPSLFNILWMTSFGSSAIWFDQQTAGALAEVSGN
                     TEQLLFTFFEQLPFGSIASFVAVIVISIFFITSADSGIFVLNSIASQGEENAPKWQSV
                     LWGALLAILALSLLYSGGLASLQTMTLIIALPFTFIMLILCIGLWKGLMVDNQYFNKK
                     FSQGSQHWAGKDWKQRLEKIINPSNKQDVRHFFIKVARPAFLELIEEFESYGLIAKMN
                     FTNEQNPKLEFEVVKENLRNFIYGIESVPRELSDLVVGDDNLPNIEQNTIYEPITYFL
                     DGRKGYDVQYMTKEELIADVLQQYERFINLAMDNSHDLMTADFNH"
     gene            12435..12970
                     /locus_tag="PXD69_001338"
                     /pseudo
     CDS             12435..12970
                     /locus_tag="PXD69_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251153.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            12998..13609
                     /locus_tag="PXD69_001339"
     CDS             12998..13609
                     /locus_tag="PXD69_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283541.1"
                     /translation="MKYEAKPLIISPNHIQQRLHGKLLARALLIIALLMLAKFIYIAS
                     LSNYFTFYLMEKFQLNIAMAQLSLFTFLGAVALGAFVGGPIGDKIGRNAVIWFSFLGM
                     APFALLLPHADLFWTIVCAIFAGFIMSSAFSAMVVYAQEAVPGRVGLISGTMFGLMFG
                     IGGLSAAVLGFFADEYGLESIFKACAYLPLLGFAALGLPKRNI"
     gene            complement(13620..14510)
                     /gene="rarD"
                     /locus_tag="PXD69_001340"
     CDS             complement(13620..14510)
                     /gene="rarD"
                     /locus_tag="PXD69_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL6283542.1"
                     /translation="MNISGKLQGWHYALLCYLTWGTFPIYWYPINQSGMPAEQILAQR
                     VLWSALFAVFLLLIFQQGRAVINAFKQPKVLGLFVLSSFMIGVNWLVYLWAIVNEHIL
                     DASLGYFINPIFNVFVGRLILKEQLNKAQLLALLFAISGILWLAIPAGQIPWVALILA
                     ASFCIYGLIRKLAPMEPLSGLALETLLMSPFAITYLCFCYHQNILVFSELNPLQMAVL
                     LCSGIATTLPLLWFAMGARRISMSLLGMLQYISPTLQFLCGVLIFNETLSAERAVGYI
                     LVWIGVGVFLLGMKKAGVKR"
     gene            complement(14592..15575)
                     /gene="epmA"
                     /locus_tag="PXD69_001341"
     CDS             complement(14592..15575)
                     /gene="epmA"
                     /locus_tag="PXD69_001341"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HDL6283543.1"
                     /translation="MNNLQLDNIDWQPTASIPHLIQRSKIITEIRKFFTDRGLLEVET
                     PILSEFSVTDVHLSTFNTQFQSPFSPEAKTLHLMTSPEYHMKRLLAAGSGPIFQLCKV
                     FRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLLQQILDCEPAESFSYQFVFQTY
                     VGLDPLSATKAQLVEKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFP
                     STQAALAQISSEDHRVAERFEFYYKGLELCNGFHELDDADEQIHRFEQDNLQREKMGL
                     EPQQLDVRFLAALKAGFPNCSGVALGVDRLLMLAMDAEKIEEVISFGIEKA"
     gene            15908..17710
                     /gene="frdA"
                     /locus_tag="PXD69_001342"
     CDS             15908..17710
                     /gene="frdA"
                     /locus_tag="PXD69_001342"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HDL6283544.1"
                     /translation="MQSVNFDVAIIGAGGGGLRAAIAAAEANPNLKIALISKVYPMRS
                     HTVAAEGGSAAVIKDTDSFDNHFNDTVGGGDWLCEQDIVEYFVEHSPIEMTQLERWGC
                     PWSRREDGEVNVRRFGGMKIERTWFAADKTGFHILHTLFQTSIKYPNIVRFDEHFVLD
                     ILTDNGEARGCVAMNMMEGTLVQINANAVVIATGGGCRTYRFNTNGGIVTGDGLSMAY
                     RHGVALRDMEFVQYHPTGLPNTGILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPIG
                     KPENKYMELGPRDKVSQAFWQEWRKGNTLKTAKGVDVVHLDLRHLGEKYLLERLPFIC
                     ELAKAYEGVDPAKAPIPVRPVVHYTMGGIEVDMNAETSIKGLFAVGECASSGLHGANR
                     LGSNSLAELVVFGKVAGENAARRALEVTARNQPQIDAQAKDVVARLHALANQEGNESW
                     SDIRNQMGDAMEEGCGIYRTQESMEATVNKIQELKERYKNISVKDKSSVFNTDLLYKI
                     ELGFILDVAQSIACSAVERKESRGAHQRLDYVERDDVNYLKHTQAYYNAEGTPTIKYS
                     DVKITKSQPAKRVYGAEAEAQEKVKKAAEAQAQQ"
     gene            17726..18457
                     /locus_tag="PXD69_001343"
     CDS             17726..18457
                     /locus_tag="PXD69_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005639269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDL6283545.1"
                     /translation="MANLDKMTIEVLRYNPESDSEPHLDRYEVPYDSQTSLLDALGFI
                     KDELEPELSYRWSCRMAICGSCGMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERD
                     LVVDLSHFIDSIEAIKPYIIDNKAPEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQ
                     FGLNPEFIGPAAITLAHRYNLDNRDNGREERMKLLSSKNGVWSCTFVGYCSEVCPKHV
                     GPASAVNQGKLESAKDYVISMIKPR"
     gene            18467..18859
                     /gene="frdC"
                     /locus_tag="PXD69_001344"
     CDS             18467..18859
                     /gene="frdC"
                     /locus_tag="PXD69_001344"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HDL6283546.1"
                     /translation="MSATKRRPYVRGMKASWWKKLDFYKMYMVREATCLPTVWFCIVL
                     FYGAVALSKGTFTTDFVDFLQNPLVVILNIISLAAMLYHAATLFVMTPAVMSVMVKGK
                     HLPVSVGRNILWAATGVISVIALILVYI"
     gene            18873..19220
                     /gene="frdD"
                     /locus_tag="PXD69_001345"
     CDS             18873..19220
                     /gene="frdD"
                     /locus_tag="PXD69_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HDL6283547.1"
                     /translation="MSLDQNPKRSNEPPVWLLFSAGGMVSALFFPVVIFIIGLLLPFG
                     LVSPDNIISFAHTWIGKLAIMVLAIFPMWAGMHRIHHGLHDLKVHTPAGNVIFYGLSI
                     LYTILVIIAVVQI"
BASE COUNT         5483 a         3810 c         4333 g         5738 t
ORIGIN      
        1 ctaagtttcc acgcttaata gttacatcgt ttaagttgag catagaaaat ccttatcgtt
       61 tcgccaatac aatccagaaa aagaactgca caccgactaa tgccgtaata ataccgaccg
      121 gaaataatgc gcccggcaca aggctttttg atagcacgga tgacatcgat aaaaatgccg
      181 cacccactaa cattgaaccg ggcaggaaaa agcgttggtc ttcgcctagc aacattcggg
      241 caatatgcgg ggcaactaag ccaataaagc cgataatgcc tacaaagcta atgcaggtgg
      301 ccgtcattac agacacaatc agcaatgttt tcattcgtaa ccaagttaag ttaatgccta
      361 agctcaatgc tcgagcttcg cccaaacgca aggcagttaa tttccacgca tctttgaata
      421 ataataaaat acagactgta gttacgccaa aggcaattga gatagtctgc caagtagctt
      481 tagttaaatt accgaatagc caaaacagaa tttgttggga tacctcaggt gcagaaataa
      541 attgcaccaa tgacagtaaa gactgaaata aaaacaataa ggcaattcct accagcacta
      601 atattgccga gctaaaacgt cctaaagagg aaaaggcaaa taaaatggcg gaagaaaata
      661 gtgtcatcac aaaagccccg acaggtacag aaatttcggt gggtaaacca aatccaccaa
      721 aggcaatcac aatcgaagca ccaaagccgg ctgcagctgc taaacccaat gtataagggc
      781 ttgccattgg attattaagc aaagtttgaa tttcagctcc gccaacacca agtgctgctc
      841 caaccaccaa tgccattatt gccattggta agcgtagctc atagacaatc actttggtgg
      901 tttcttcaat ttcgcctaat tggaataagg ctttccaaac ttcattaaac ggaagcaggg
      961 aagggcctgt cataatatcg aaaatgaggc tgagtaaaca aatgagtaag aaaaagagta
     1021 ataaaaaact gcgtttcttt tcaatagttc ggtgcttttt agctatttgt tggggagaga
     1081 gcgttgtttg cataaaaatg taatgtttga gaattattat cagacaggat aagagaaaag
     1141 atcgataaat tcaagaatat ccaagatacc gactaaagta ttcaactaag ttctcgagta
     1201 gccctgtctt ttacagtaaa aaactcctga atagcggctt cttctaaaag agtataattc
     1261 tgccaaattt cggttacagc atttcttaaa atctcacctt tcttaactct tgatgacatt
     1321 cccaagaata cctgttctaa gaaatctaaa tcggcataat gagttaatgc ttttcgtgac
     1381 tgtaaccagt taaacatcgg cacaaattgt tcaggaaaaa tcgtgcgttg ttgttcgatt
     1441 tgctgaaaga tctgtgcttg tacctcattt aaatctttag caaataaccg ttggaaatgt
     1501 ttagcgagaa aatggtcgat cataatatcc gacacaatgc ctttataacg cccgaatgtg
     1561 ccttggagta attgggttgt gaggctgtcc ggtcggtccg aaatcttatc aatcgagcgg
     1621 tgtaacacca caccgctttt taagttatcc gctaaattga gatgcggaat taaaccttta
     1681 tagaaatcac cggcaaagtt gccatatagg gtctgttgct tggtttgggt gtcaatttca
     1741 agtgaaatca gcgaatgggt aagaaaattc atttatgctc caagtgcagt ttggtgatac
     1801 tcaaacccaa actcgttggt ttcgcctttc ggtacaaact caaataaatg cgtaatgcaa
     1861 tttggagcat cgctgtcttg gtgcgaaaca aaaagtagtt gcgtttggct gttagtcact
     1921 aattgttcaa tgaactgttt gactaatttg cggttaatgc cgtctaaacc ttgtaacggt
     1981 tcgtctagaa tcagaattga tgggtgtttc accattgctc gggtaatcaa aagtaagcgt
     2041 tgttgccccc acgagagaga gcgaaacggc tttttggcaa cattgcttaa attgaggcgt
     2101 tccaaccatt ccattgcttt taattgcaag gcattcggca cttgttgata cacgccgatg
     2161 ctgtcaaaaa agccagaaag aatgacctcc attgcggagc aatttacccg ataatccata
     2221 tgcaactggc tgctgacata gccgatattt ttcttaatat cccaaatggt ttcgccactt
     2281 ccccgttgtt tgccaaatag tcggacttta ttggcataag attgtgggtg atcgccggtg
     2341 ataatcgaaa gcaaggtcga tttcccagct ccattcgggc ctttaatcca ccagtgttgt
     2401 ttaggctgaa ccgtccaact taggttatct aaaatcttct tctccccata ttgaatattc
     2461 acattttcca actcaaacgg attgatgttt tccggcaggc tgagtagcgg agctgcacta
     2521 tcaggcagtg gcacattgac attctcttct gcaaatttta gctgagaata gaccgcttgt
     2581 tgttcaattt ctgctcgctc tccttgcaga attaatgata aattatctaa taactcaata
     2641 tgattggcag catcaggaat atcgttaaaa cgatttacaa tcagcactaa cgccattttg
     2701 ctttgtagtt cggcaatcag ttgttgccaa tattgcaccg actgctgatc cagcccttca
     2761 aacggttcgt ctaaaatgaa taaatccggc tcgctcacta acatttggca aaatagcact
     2821 ttgcggcttt caccggtgga aaggtgcata aacgggcgtt caagcagatg ttgaatatgc
     2881 aatttgtggg catattcctc acataacgcc tcttttggac tgccatttaa aattacttgt
     2941 cgtgcggtta agccgaaatc atcgggcgag acactatcgt tgttccgatc tttgaaaatc
     3001 tgctccaaca ttttttgttg ttgctcgaaa gagaggagct gaatatgttg gaacgaatta
     3061 ccatagtcgc cggaatagag cgagatttta ccctgtaaag cgagtgaaaa agttgttttg
     3121 cctgaaccgt ttccgtctac gaccacctaa aagtcattgg gttggatctg taaggcgtca
     3181 atcgtgagtt tatgttgttt aaccagtgaa aatcgggcat tggttattgt aagtgaaggc
     3241 tgtgtttgca tatatttccc gttttaactt agttgtgtcc cgctgacgaa ccaatccgct
     3301 cgaccgttta agaaatcttg caccgacatt ggttttttac ccgccggttg aagttgggta
     3361 atattcagca cgccctgttg ggtggcaatt tgaatcccgg ttttatccac attaattacc
     3421 gtgccggctg ctttttcttg gtgaggtaac accgtggctt ggtgaatttt gatactttgc
     3481 tcaacgccat caacggttaa ggttaaaaaa ctaaacggcc aagggttaaa agctcggata
     3541 ttgcgttcca gttgaactgc tgggagttgc caatccaatt tagcttcttc tttggaaagt
     3601 ttctcggcgt aattggacag tgcttcatct tgtttttccg ctttgaatgt gtggttggct
     3661 aaaccgttta acacctcaag caatgccaga ggggcaagtt ctgccagttt ggcatacaag
     3721 gaggcggagg tttcattcgg ctcaatcggg gttgtgactt tatgtaacat atcaccggtg
     3781 tctaagccaa cgtccattag cataatggtt acgccggttt ctgtatcacc tgcccaaatc
     3841 gaacgctgaa tcggagctgc tccacgccag cgaggtagta gcgaaccgtg tacgtttagg
     3901 caaccatatt taggagcatt caatactgct tcaggtagaa ttaagccgta agctaccacc
     3961 accatcacat cggcatttag ggctttcagt tcagcttgag cctcttcctt acgcagggat
     4021 ttgggttggt aaacaggaat gttgtgagct tcggccagct gttttaccgg gctggcttgc
     4081 agttttttgc ctcgcccggc aggtttatcc ggctgagtat aaaccgcaat cacgttatgc
     4141 tcggaatcta ataaggcttg taaatgttga gcggcaaaat caggcgtgcc ggcaaaaata
     4201 atattgagtt ttgacatatt ttttattcgt tcaagttatc aatgaaagac ttattaaacc
     4261 attaaacagc acaaataaaa agtggcttga atatggtatc attgccacat tcaagataag
     4321 agaatcaaac aatggaattt tttatcccca aagcggatac aatttttgaa gaagagatta
     4381 aaaaaagccg atttatcacc taccttcgcc atactgaggg tatggagcag gccaaggcat
     4441 tttggcagga gctgaaaatt cagcatccgc acgcacgcca ttggtgttgg gcaacggtgg
     4501 caggcttgcc gaatgattcg caacaatacg gcttttcgga tgatggagaa ccgtctggta
     4561 cagcaggtaa gccaatgctc aattatttgc ttgggtcagg cttgggggaa attacagcgg
     4621 tggtggttcg ctactacggt ggtatccagc ttggcaccgg cggcttggtg aaagcctatg
     4681 gcaatggggt gcaacaggcg ttattgcagt tggagcggat tcgcaaagtt ttgcgaaaaa
     4741 actaccgctt gcaatgtgaa tatgagcagt ttaataccat ttctcatctc attagcgaga
     4801 aagatattgt gattgtcgag caacttttta gcgataaagt ggatttgttg ctggcattta
     4861 acccgagcga ggttgaggcc tttgcagatg aattaaccca acgcttttcg ggcaagctcg
     4921 cattaataaa agaagaaatc tagtctatgc aatttttttc cattattcgt attgttggca
     4981 ttttggtgat gtgtttttca ttcacaatgc ttgtgccggc aacggtcgcc ctaatttatg
     5041 gcgatggcgg tgggcgggcg tttttagaag ccttcgctct gaattttatg gtcggtacgc
     5101 tgctttggtg gctgtgccgt gacaacaaaa acgagctacg ttcccgtgag ggctttttga
     5161 ttgtagtact gttttgggtg gtgctgggtt tgctcggggc tgtgcctttt attattttgg
     5221 aaaaccccga tttaaacgtg gcggaatcca tttttgaatc cttttccggc ttaactacaa
     5281 cgggtgcaac cgtcatcacc ggcttagata gcttgcccaa agcgatttta ttctaccgcc
     5341 aatttttgca atggctaggg ggaatgggga tcattgtgtt agcggttgcg attattccgc
     5401 tgttaggcat tggtggaatg caactttatc gtgcggaaat gcccggaccg ctcaaagagc
     5461 agaaaatgcg acctcgcatt gcggaaacgg caaaagcgtt gtggctgatt tatctcagcc
     5521 tgacgattct gtgtgcggtc gcattttggc tcgccggaat gacggtgttt gatgccattt
     5581 cgcatagctt ttccacggtt tcgattggcg gattttctac ccacgatgcc agcatcggct
     5641 attttaataa tgcggcaatt agctatatta ccgtgttttt cctgctactt tctgcctgca
     5701 actttgcatt gcattttgcg gtgattgatc gcatacgaga tgcacaatca cgcaaaaaag
     5761 ggggtatttt aagccgcttg tattggggcg attacgagtt tcgttttttc ttgatggtgc
     5821 agttagggct tttcttggtt tgtaccttgg tgttagtggg ttacggttat ttcgataata
     5881 cctctgttac gattgagcaa gcgttgtttc aatcggtgtc catttccacc acggccggct
     5941 ttactaccaa tgattttagc caatggagtt cgtttttacc cacgctgttg gtgctgtctt
     6001 catttatcgg tggttgtgcc ggctcaaccg gtggcggctt gaaagtgatt cgggtgttgc
     6061 tgctttattt acaaagtaaa cgtgaaatcc accgctacat tcaccccaat gtgattcaac
     6121 cgattaaatt aggcaaccac gttttatcgg aacgggtggt tgatggtatt tgggcgtttt
     6181 tctcggcgta ctttttcgtg ttcgtgatct gctggcttgc taccatcgct tgtggaatgg
     6241 aaacctttga tgctctaaat gcggtaattg cctcactaaa taatctaggt cctgcattag
     6301 ggagcgtgag cagcaatttc acccaagtgc cggacagtgc caagttagtg ctgacttttg
     6361 caatggtatg cggacgtctg gaagtgttta ccttgctggt gattttaagc cctgtttttt
     6421 ggaaagatta aatgaaaacc ttaattctct attttacgac cgatggtcaa accaaaaaaa
     6481 ttgccgaacg attggcggac gtgattactc acgaagtcga gctgatttcg ctaaaagatc
     6541 aagcggtcga ttttgccgaa aaaattgcaa atgccgacca aattgtcatc ggtgcttcaa
     6601 ttcgctatgg gcattttaac ccgttggttt atcagtttgt ggaacagcat tatccggcat
     6661 taaacgccaa gaaaactgcc ttttacggtg tgaatttgac cgctcgcaaa gataatcgaa
     6721 acacgcctga aaccaatact tatgtgcgta aatttttagc taaagtgaaa tggaaaccaa
     6781 cccacattga ggtaattgct ggggcattac tttacctacg ctataagcca ttcgaccgat
     6841 tgatgattcg ctttattatg aaaattacca aaggcgaaac cgatacctcc aaagaatatg
     6901 agtacaccga ttggcagcag gtggagaatt ttggcaaatt attagccaat cagttataat
     6961 caaactgatc taaatcaaaa aaatgtaaat ttatttaaat gttgtagaaa ttttaaagat
     7021 tttgattata atcgccagcc cacgttcttg cgaagaccgt gtttaatcat tgaatgaaag
     7081 gaaagccccc ttgagtattt taaaagagtt ccgtgaattt gcggtaaaag gtaatgttgt
     7141 tgatatggct gtcggtgtga ttatcggcgg tgcattcggt aaaattgttt cttcattagt
     7201 tagcgatgtt gtaatgccac ctatcggttg gttaatcggt ggcgtggatt tcaaagattt
     7261 agccattgaa atcgccccgg caaaagaagg tgcggaagca gtgatgttaa aatacggtgc
     7321 atttatccaa aacgtatttg atttcttaat tatcgcactt gcggtattcg gtatggtgaa
     7381 agtgattaac tcactgaaaa aagctccagt tgtagaagaa gctcctgcag agccaacagc
     7441 ggaagagaaa ttattaactg aaatccgtga tttattgaaa aaataattaa ctgattttga
     7501 aacaagggct attttagaat atctagaata gccctttgtg ttatggttaa aaagaaaaaa
     7561 accaacataa agtcggtttt tttcatatct gttcgatatt acgctaattt tttgatttgc
     7621 gctgctaatt tagatttgtg gttagccgct ttgttagcgt ggattaagtt tttagatgcc
     7681 atacggtcta caactttttg catttcaacg aaagccgttt gagctgctgc tttatcgcct
     7741 gctgctactg ctgcatatac ttttttgatg aatgtacgca tcattgagcg ttggcttgcg
     7801 ttgtgttggc ggcgtttttc agattgaacc gcacgttttt ttgctgactt gatattagcc
     7861 aaggtcaaac tcctaaaata tctgtgtaaa aattagatat aaacaaaatc gttgtttata
     7921 ttgcctatcg atagttttta attcattttc aacgagacac gtgcttgaaa ataacaccgt
     7981 ttttctgata gaaaacgata gggcgagatt ttaacagttt ttttctgatt ttcctataac
     8041 aaactgctaa aattatgatc gatttttagg atcagactac aagcggtctg atttttcaat
     8101 aattttacta atattactct ttattatgag caaaaaactt ttaagatcag gaatgatcgt
     8161 aagctttatg accttaattt ctcgcatact cggtttgatt cgagacattg tggtggcaac
     8221 cattttaggc acaggcgtga gtgccgatat tttcctgttt gccaaccgta ttcccaattt
     8281 tcttcgccgt ttgtttgccg aaggggcatt ttctaaagcc tttgtgccgg tgttggcgga
     8341 atataatgcg gataacgatc caaacaaaac gagagaattt attgccaaag tatcgggtac
     8401 attaggaggt ttggtaactg ttgttaccct tgtggcaatg attgcctcgc ctgtggttgc
     8461 cgctcttttt ggtacaggtt ggtttttaga ttggctttac gacgggccaa atgccgaaaa
     8521 attcacccaa gcctcttttt tgctcaaaat cactttccct tatttgtggt ttattacctt
     8581 tgtggcgtta tccggtgcgg tgttaaatac catcggtaag tttggggtga tggcattttc
     8641 cccggtgttg ctgaatgtgg cgattatcgc ggtagcgtta tggggcagag attatttcga
     8701 ttccccggat attgccttag cgtggggggt atttttaggc ggcttattgc aatttttatt
     8761 ccaaattcca tttatgaaaa aagagggctt actggttaag ccaaaatggg cgtggaaaga
     8821 cgaaggtgtc actaaagtcc gtaaattaat gattccggct ttatttggcg tttccgttac
     8881 ccagctaaat ttactgctaa accaagtgat tgcctcgttt ttgattaccg gctcgattag
     8941 ttggatgtat tatgccgacc gcttaattga atttccgctc ggtttatttg gaattgcgat
     9001 ttccaccgtc gtgctgccaa gcctttcccg tattgcgaaa aacaaagaac tcactgaaat
     9061 ccaacgtgga gaacactttc aaaacacaat ggattggggg gtgagaatgg tgctgttgct
     9121 cggcattccg gcaatgatcg gtatggcagt gctggctcag ccgattatta tgacaatgtt
     9181 tatgcggggt aaatttggtt ttgaagatgt gctggcaacc tcttatccac tttgggtaat
     9241 gtgcttgggg ttaaacagct atatgttgat tagcgtgctg gcaaacggtt tttatgccaa
     9301 ccaaaacacc aaaacaccgg taaaagttgg gattattgcc gccttaagta atatttgctt
     9361 tggcttggcg tttgctccgt ttttgggata cattggttta gcgttagctt ctgcgtgttc
     9421 ggcattagtg aatgtgagct tgctgtatgt gaatctctca aaaaatggtt actataaagt
     9481 aagccataaa accgtgcttt ttgtgttgaa actattcatc gccgcttgtg taatgggggc
     9541 gttggttgcc tatttcacgc ctgagattga actttgggca ttaatgacaa tgtggcagaa
     9601 agtgtattgg ctgatttggc tgatgatctt agccggcggt agttattttg cctctatttt
     9661 ggtattaggc attcgtaaaa aagatttccg ctcggcataa aatgaaatca ttaaaactga
     9721 aaatcccgcc gccggcttgg ttcttgcttt gtgccgcttt aatgtggctg gtagctcaat
     9781 atgtgccggt gagcttgccg aattatcagc atacagccat attttttagc ggtttagctg
     9841 tggcgataat tggcggagcg gttgccgtct cggcactttg ggtcatacac caagcgaaaa
     9901 cgacatacag tccttttcga ccacaacata ccgctaaatt ggtcacttgg ggcatttacc
     9961 gcaaaagccg aaacccaatg tatctttcgt tactattagg tttgattgcg tgggcattat
    10021 ggttgggggc aatgttggcg tggctggttt taccgctgtt tgtatggttg ataacctatt
    10081 tccaaatcaa gccggaagag caaattttag cccaaaaatt cggcacacat tatgccaaat
    10141 attgcaacca agtaaggcgt tggctttaaa tgcaagcggt gagattttgt tggaaatttg
    10201 caaatttttc cgaaaatctc accgcttgtg gggttagtga ttgaaatcag ccgtcattaa
    10261 gtcgtgcgag ttgtccatcg ctaaattgat aaagcgttca tactgttgca gcacgtcggc
    10321 aatcaactct tctttggtca tatattgcac atcataacct ttccgcccgt ctaagaaata
    10381 agtaatcggc tcgtaaatgg tattttgctc aatgttcggt aggttgtcgt cacctaccac
    10441 caaatccgat aattcccgtg gcacactttc aatgccgtaa atgaaattgc gtaaattttc
    10501 tttcaccact tcaaactcta atttcgggtt ttgttcgttg gtgaaattca ttttagcgat
    10561 taagccatag ctttcaaatt cctcgataag ttctaaaaat gctggtctgg caactttaat
    10621 aaagaagtga cggacatctt gcttattgct tgggttgatg attttctcca agcgttgttt
    10681 ccaatcttta cccgcccaat gttggctacc ttgcgagaat tttttgttga agtattggtt
    10741 atctaccatt aatcctttcc ataagccgat acagagaatc agcataatga aggtaaatgg
    10801 taaggcgata atcagtgtca ttgtttgcag agaagccaag ccacccgaat agagtagtga
    10861 taacgctaag atggctaata atgctcccca aagcacgctt tgccatttcg gtgcattttc
    10921 ttcgccttgt gaagcaatgc tgttgagaac aaaaatcccc gagtcggcag aggtgataaa
    10981 gaaaatactg ataacaatga cggcaacgaa agaggcaata gagccaaacg gtaattgctc
    11041 aaaaaaggta aataacagtt gttcggtatt gccgctgact tcagctaaag caccggcagt
    11101 ttgttgatcg aaccaaatgg cagagctgcc gaagctggtc atccataaaa tgttaaacag
    11161 cgatggaaca aatagcaccc ctaaaataaa ttcacgaatg gttctgcctt tagagatctt
    11221 ggcaataaac aaaccaacaa atggcgccca agatgcccac catgcccaat aaaggaccgt
    11281 ccagccgctt agccagcctt gatgttccgg ttcataagcg aaggtacgga aactcatctc
    11341 aagcagcgag ctaaaataat agcctaaatt ttcggtgaag cttgagaaaa gtaatagagt
    11401 tgggccggtg attatcacaa aaataagtag caatccggct aatgtgagat tgatttcact
    11461 taagatttta acccctttgc ctacgcccga aacggcagat aacacggcaa gagccattgc
    11521 tactgttacg ataatcgcaa gaacagtaaa attgctctgt tcaattaaac ctagattgtt
    11581 aaagccagca ctgacctgca tcaccccaaa gccaagtgta gtcgttaaac cgaaaatcgt
    11641 gctacaaagg gcaataatat caattaaatg cccccagaag cctgaaatac gatgttttag
    11701 taagggataa aatccggaac gaatagtgag tgctaactta tatctgaagc caaaataagc
    11761 aagagctaag gcaatcacac cataaattgc ccaagcgtga ataccccaat gatagaacgt
    11821 tgtcatcatc gcttctttca tacgctccgg ctcagttaaa ttttgttgga cgggtttaag
    11881 gtaatgcaaa ataggttctg ctaccccaaa atacattaac ccgatcccca ttccggcggc
    11941 gaataacatc gcaatccaag agccaaaacc aaattcaggc tcatcggtat ctgcccctaa
    12001 tttaatatca cccaatcggc tgaaagagag aaaaattaga aacaggaaaa agatagagcc
    12061 tgcaaaaata tagaaccagc taaaatgttg gaagagacta tttttgatgg tatcaagtga
    12121 ggtttgtgct tgctgtggaa agatgataca gaaaacggca acaaagctga caaagagtaa
    12181 actcggtagg aaaatcggta ccctaaaggt acttcctgtg tttaattttt tgattaaatc
    12241 caatgctatt tcctctattt ttgaatggtt agaggcttga atatagcaaa aagatataaa
    12301 aataacaaat ttaagacgta ttggtaataa tattgcaacc taatgggttt ggtaaaaaaa
    12361 tcgggaaatt tgaccgcttg cacattcatt atttgcgagt agaatatttt tcatttataa
    12421 aaaacgaata aagaatgcac acacaacata acgctcaaaa aatggttttg cccattttac
    12481 tgctgatttc cctttctcat ttgttgaatg atttagttca agcagtaatg gtttcgatct
    12541 atccaatgct aaaagaaaat taccaactga gttttgctca aattggtatg atttcactca
    12601 tttatcaaat taccgcatct attattcagc cgggtattgg gctttatacc gatacccaaa
    12661 accgaattta ttgcccgtca gtatgctgat tacgcttctt tccgtgattt tacttgcctt
    12721 ttcgccgaat tttggcgtgt tactgatagc cgctgcgtta atggggatag gctctgccat
    12781 ttttcaccct gaagcctctc gggtggctcg aatggcatcg ggcggtaaat ttggtacagc
    12841 tcagtcgctt ttccaagtag gtggaaacag tggatcggcg ttaggtccgc tcttagttgc
    12901 attatttatt gtgccgttag ggcaaagtgc ggtgatttgg gttgttgcat ttgtattatt
    12961 ggcattatga tgggttttat ataaagtaag ccgttgggtg aaatatgaag ccaaaccgct
    13021 cattatttca ccaaaccata ttcaacaacg cttacacggt aaattattag ccagagcatt
    13081 attaattatc gctttattga tgttagcgaa atttatttat attgcgagcc tcagtaacta
    13141 tttcaccttt tatttaatgg aaaaattcca actcaatata gcaatggcac agctctctct
    13201 atttaccttt ttaggtgcag ttgctttagg cgcttttgtc ggcgggccga ttggcgataa
    13261 gattggacga aatgcggtga tttggttctc tttcttaggt atggcacctt ttgctttgtt
    13321 gttgcctcac gcagatctct tttggacgat tgtgtgtgcg atttttgccg gttttattat
    13381 gtcatcagcg ttctccgcta tggtggttta tgctcaagaa gccgtaccag gcagagtagg
    13441 gctgatttcc ggcacaatgt tcggtttaat gtttggtatt ggcggcttaa gtgccgccgt
    13501 attgggtttt tttgcggatg aatatggctt ggagagtatt tttaaagcct gtgcctattt
    13561 gccactactt ggttttgctg cattagggct accaaaacga aatatttaac gttttatttt
    13621 tagcgtttga caccagcttt tttcataccc aataagaaaa cccccacccc aatccaaacc
    13681 agaatgtagc ctacagcacg ttcggcggaa agtgtctcat taaaaatcag cacaccgcat
    13741 aaaaattgca gggtaggtga aatatattgc agcataccga gtagcgacat tgaaatgcgt
    13801 cttgcaccca ttgcaaacca tagcaatggt aaggtagtgg caatgccgga gcagagtagc
    13861 actgccattt gtaaaggatt gagttcactg aataccaaaa tgttttggtg gtaacaaaag
    13921 cagagatagg tgatggcaaa aggcgacatc agcaaagttt ctaacgccaa accagacaaa
    13981 ggttccattg gggcaagttt acgaatcagc ccgtaaatac agaaactggc ggctagaatc
    14041 aatgcgaccc acggaatttg tccggcagga atagcaagcc ataaaatgcc gctaattgca
    14101 aacagcagag ccaataattg ggctttattc agctgctctt ttagaataag cctaccgaca
    14161 aacacgttga aaatggggtt gataaaataa cctagactgg catctaaaat atgctcattg
    14221 acgattgccc ataagtaaac cagccagttc acgccaatca taaaagaaga aagcacgaac
    14281 agcccgagta cctttggctg tttaaaggca ttaataaccg ctcgcccttg ttggaaaatc
    14341 agcagcagaa acacagcaaa tagggcagac caaagcaccc gttgagccaa aatttgctcg
    14401 gcaggcattc ccgattggtt gatcggatac caataaatcg gaaaggttcc ccaagttaag
    14461 tagcacagta gggcatagtg ccaaccctgt aatttgcctg aaatattcat tttgctttcc
    14521 taaacgagtg tacaagcggt catatttgtc gatttttttg caaattgcaa atcacaaaac
    14581 ggcataaaaa attaggcttt ttcaatgccg aaagaaataa cctcttcaat tttttccgca
    14641 tccattgcca gcattaacag cctatcaacc ccaagggcga cacctgagca gtttggaaaa
    14701 cccgctttga gtgcggcaag aaaacgcaca tctagttgct gtggctccag ccccattttt
    14761 tcacgttgca gattatcttg ctcgaagcga tgaatttgct catcagcatc gtctaattcg
    14821 tggaagccgt tacagagttc caagcctttg tagtaaaact caaaacgttc ggcaacacgg
    14881 tgatcttccg agctaatttg agctaatgcc gcttgggtgg aagggaaatg ataaacggca
    14941 gttggtcttt cttgcccgat attggcttcg acaacctcgc tgaataaaaa ttgtaacaag
    15001 gtgtcacgct gttcatcatc atcacattgc aagccgtgtt ttcgggcttt ttccacaagt
    15061 tgtgctttgg tggcagaaag cggatctaat ccgacatagg tttggaacac aaattgatag
    15121 ctgaatgatt ctgccggttc gcagtccaaa atttgttgca gtaaatcatc cacttcattg
    15181 attaagcgat acatatcaaa atgcgggcga taccactcca gcatcgtaaa ttcagggttg
    15241 tgtcgcttac cggcttcctc gttgcgaaat actttacaca gttggaaaat cggtccactc
    15301 ccagcagcaa gtagtcgctt catatgatat tccgggctgg tcatcagatg gagtgttttc
    15361 gcctcagggg aaaaaggcga ttgaaactgc gtattgaaag tcgaaagatg aacgtctgtc
    15421 accgaaaatt cgcttaaaat cggggtttct acctctaaaa gccctcgatc ggtaaagaac
    15481 ttgcggattt ccgtaatgat ttttgaacgt tggatcaggt gaggaataga ggctgttggt
    15541 tgccaatcaa tattatcgag ttgtaaattg ttcataaaaa atgaccgctt gaaaatgtga
    15601 ggctatttta gcctaaaaaa gtgagttgcc ctagttaccg atcaagaaaa ataaagagag
    15661 ggttttaact tttttgcaac aaattaaatt ttctcatttt aaacattaga aattttcttt
    15721 ctatcactgt ccaattaaga gccattctca atacctttat gaagctttat tacctttttt
    15781 gaggtagatc acaaaattac attttttatg ttacaaattt gtaaaaatag gttatctcat
    15841 tgctcaaata gtggcacaat atgattactt tttaatgaat taagttattt aactttcgga
    15901 gtgcattatg caaagtgtta attttgatgt cgcgattata ggtgccggtg gtggtggctt
    15961 gcgtgctgct attgcggcgg ctgaagcaaa tccaaatcta aaaattgctt taatttcaaa
    16021 agtttaccca atgcgtagcc atacggttgc agcagaaggt ggttcagcgg cggtaattaa
    16081 agataccgac tctttcgaca atcactttaa tgataccgtc ggtggtggtg actggttatg
    16141 tgagcaagat attgtggagt attttgtaga gcattcgccg attgaaatga cacaattaga
    16201 acgctggggt tgcccttgga gtcgtcgtga agacggtgaa gtgaatgttc gccgttttgg
    16261 aggaatgaaa attgagcgta cttggtttgc ggcggataaa accggtttcc acattttgca
    16321 tactttgttc caaacttcga ttaaatatcc gaatattgtg cgttttgatg agcattttgt
    16381 gctggatatt ctcaccgaca acggcgaagc tcgtggttgt gtggcaatga atatgatgga
    16441 aggcacactt gttcaaatca atgcaaatgc agttgtgatt gcaaccggtg gcggctgccg
    16501 tacttatcgc tttaacacta acggcggtat tgtaaccggc gacggtttat caatggcgta
    16561 tcgtcacggt gtggctttgc gtgatatgga gttcgtacaa tatcacccaa caggtttgcc
    16621 aaataccggt attttgatga cagaaggttg tcgtggtgaa ggtggtattt tagttaataa
    16681 agatggctac cgttacctgc aagattatgg tttaggaccg gaaacaccta tcggcaaacc
    16741 ggaaaacaaa tatatggaat taggccctcg tgataaggtt tcacaagcat tctggcaaga
    16801 atggcgtaaa gggaacacct taaaaaccgc aaaaggcgtg gacgtagttc acttagattt
    16861 acgccattta ggtgaaaaat atttacttga gcgtttaccg tttatttgtg aattagcgaa
    16921 agcctatgaa ggggtcgatc cggctaaagc gccgattcct gttcgcccgg tggttcacta
    16981 cacgatgggt ggtattgaag tggatatgaa tgcggaaacc tcaattaaag gcttattcgc
    17041 agtaggtgaa tgtgcttcat caggcttgca cggtgcgaac cgtttgggtt ctaactcatt
    17101 agcagagctt gtggtgttcg gcaaagttgc cggtgaaaat gcggctcgcc gtgcgttaga
    17161 agtgactgct cgcaaccagc cacaaattga tgcacaagca aaagatgtgg tggctcgctt
    17221 gcacgcatta gcgaaccaag agggtaatga atcttggtcg gatatccgta accaaatggg
    17281 tgatgcgatg gaagaaggtt gtggtattta ccgtacccaa gaaagtatgg aagcgactgt
    17341 aaacaaaatc caagagctaa aagagcgtta taaaaacatc agcgtaaaag ataaatcaag
    17401 tgtgtttaac actgatttac tctacaaaat tgaattaggc ttcattttag atgtggctca
    17461 atccattgct tgctctgcgg tagagcgtaa agaatctcgt ggggctcacc aacgtttaga
    17521 ctatgttgag cgtgatgatg tgaactactt aaaacacaca caagcgtact acaatgcaga
    17581 gggtacaccg acgattaaat acagcgatgt gaaaatcact aaatcacaac cggctaaacg
    17641 tgtgtatggt gcagaggctg aagcccaaga aaaagtcaaa aaagcagcag aagctcaagc
    17701 acaacaatag agaaggagta gtaaaatggc aaatttagat aaaatgacca tcgaagtgct
    17761 acgctacaac cctgaatcag atagcgagcc acatttagac agatatgaag tgccgtatga
    17821 cagccaaact tcacttttag atgcattggg cttcattaaa gacgaattag aaccggaact
    17881 ttcttatcgc tggtcttgcc gtatggcgat ttgtggttct tgcggaatga tggtaaacgg
    17941 taagccgaag ttagcttgta aaacattcct gcgtgattac agcggtttta tgcgaattga
    18001 gccgctggcg aacttcccga ttgagcgtga cttagtagtg gatttaagcc actttattga
    18061 tagcatcgag gcaattaaac cttatattat tgataataaa gcaccggaag gacagcgtac
    18121 taaacaaacg ccggcacaat tagagaaata tcgtcaattc tcaatgtgta tcaactgcgg
    18181 tttatgttat gcggcttgcc cacaatttgg tttgaaccct gaatttatcg gacctgctgc
    18241 gattacattg gctcaccgct ataacttgga taaccgtgat aatggtcgtg aagagcgtat
    18301 gaagctactc agcagcaaaa acggtgtttg gagctgtact ttcgtgggtt actgctcgga
    18361 agtctgtccg aaacacgtcg gccctgcttc ggctgtaaac caaggtaaac ttgaaagtgc
    18421 gaaagattat gttatctcaa tgatcaaacc gagataggag gaagaaatgt cagcaacaaa
    18481 acgtagacct tatgtaaggg gaatgaaagc cagctggtgg aaaaaactcg acttctataa
    18541 aatgtatatg gtgcgtgaag ctacctgtct tccaactgtt tggttctgca ttgtattatt
    18601 ttatggagca gttgcgttaa gtaaaggaac atttactacc gattttgtgg atttcttaca
    18661 aaatccgtta gttgttatcc taaacataat ttcattggca gcaatgttat atcatgcggc
    18721 aacacttttt gtgatgacac ctgccgtcat gtccgtgatg gttaaaggta aacacttacc
    18781 agtctcggtt ggaagaaata ttctttgggc agcaacaggc gtaattagcg taattgcatt
    18841 aatcttggtt tatatttaag aaggggaaga aaatgagtct tgatcaaaac ccaaaacgtt
    18901 caaatgaacc gccggtatgg ttgcttttta gtgctggggg aatggtaagt gcattatttt
    18961 tccctgtggt aatctttatt atcggtttat tactgccatt cgggttagta tcaccagata
    19021 atatcatttc ctttgcccat acttggatcg gcaagctcgc tattatggta ttagcgattt
    19081 tccctatgtg ggcaggaatg caccgtatcc atcatggatt acacgacctg aaagttcaca
    19141 cgccagcagg taatgtgatt ttctacggat tgtctatctt atacacaatt ctagtaatca
    19201 tcgcagtcgt gcagatttaa atgagaaaga ccatcttgta taaagcagat ggtcttttca
    19261 tttttaatat gctaacaagc ggtcgaattt ataagaaaat ttgcaaatat tagaaatttt
    19321 gccgataaaa cgatcgtttt gtattaaata tctgcaaaaa agat
//
LOCUS       DANLXO010000046        19289 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.046, whole genome shotgun sequence.
ACCESSION   DANLXO010000046 DANLXO010000000
VERSION     DANLXO010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19289
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.046"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(34..930)
                     /gene="malM"
                     /locus_tag="PXD69_001346"
     CDS             complement(34..930)
                     /gene="malM"
                     /locus_tag="PXD69_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose operon protein MalM"
                     /protein_id="HDL6283548.1"
                     /translation="MKKTLLSTAIFFAHLLVVSPSIANGSAGKSIHINSAELAQIQWQ
                     DVPFSQTVKTDLSEQHKQAFTTAFAGIASPVAAYRIPANQGTLEIEIESPVMDKNVFV
                     PTAVVLDSQFNVASTYPSSEFKLLEERGLKGSRLGAELNLTPAMNQDYIYLLIYTTQQ
                     DLAKTTMMPHPAKTYAKATGKQPPAINDIEVAHSLKGQIHINVTGSNGTKFIGLPTEI
                     FSSNKAATPAAKTAIPLPIKENPVAVKTAVDKDTEAYFNQAVMKAIKAKDINKAMNLV
                     NEAEKLGLTSPRQIFLKNVSSN"
     gene            complement(1011..2300)
                     /locus_tag="PXD69_001347"
     CDS             complement(1011..2300)
                     /locus_tag="PXD69_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin"
                     /protein_id="HDL6283549.1"
                     /translation="MKKTVLAVAISGAMFAASASAVDFHGYARSGIGWTSGGGEQSAF
                     TVNGGGSKYRLGNESDTYAELKLGQELFKSGEKSIYFDTNLAYGGTLHNNDWTPTSPA
                     LRELNVQFKNFADSLPGATLWAGKRFYQRHDVHMNDFYYWDISGPGAGVENIDLGFGK
                     LSLAVTRDTERGGANTFGYTTVYKLDPSTGKIKLDKQRNKADVYNDIFDVRLAGIELW
                     KDGSLELGFDYGNAHAKKGAALEKGATKNGYMVTAEYTQGNFFGGFNKFTAQYATDSM
                     TSWNNGHAQGSKADNKGNMLRLINQGVVQASDKVEVMYALIYEKTKLDNKQGKTWYSA
                     GIRPMYKWNDTMSTLLEVGYDRIKDQATGKKNDLVKYTVAQQWQAGNSIWARPAIRVF
                     GTYARWNDKFNTKARTDAGYKAKDGEFITGVQFEAWW"
     gene            complement(2398..3516)
                     /gene="malK"
                     /locus_tag="PXD69_001348"
     CDS             complement(2398..3516)
                     /gene="malK"
                     /locus_tag="PXD69_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005552148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter ATP-binding
                     protein MalK"
                     /protein_id="HDL6283550.1"
                     /translation="MANVSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKST
                     LLRMIAGLEDITTGELYIGGKLMNEVEPSKRGIGMVFQSYALYPHLDVAENMSFGLKL
                     AGVSKAERDQRVNQVAEILQLAHLLDRKPKALSGGQRQRVAIGRTLVSQPEVFLLDEP
                     LSNLDAALRVQMRVEISKLHKKLNRTMIYVTHDQVEAMTLADKIVVLNAGGIAQVGKP
                     LELYHYPANRFVAGFIGSPKMNFLPVKVIAVEPERVKIELPDANHHNFWIPVSGEGVN
                     VGDNLSLGIRPEHLVPSDQTQVTLHGIVQVVELLGNETQIHLEIPEIKQPTLIYRQND
                     VVLVNEGDDLNIGILPERCHLFKEDGTACKRLFVEKGV"
     gene            3937..5127
                     /gene="malE"
                     /locus_tag="PXD69_001349"
     CDS             3937..5127
                     /gene="malE"
                     /locus_tag="PXD69_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HDL6283551.1"
                     /translation="MKNKCVKFTLATLATLVLSGTVMAKMTEGKLVIWINGDKGYNGL
                     AEVGKKFEKDTGVQVLVEHPDRLEEKFAQVASTGDGPDIMFWAHDRFGGYAQSGLLAE
                     VNVSKEFKDKFVDFAWDAETYNGKIIGYPVAIEAISLIYNKDLVKEAPKSWEEIIELD
                     KKLKKEGKNAIMWNLSEPYFTWPIAASNGAYAFKFANGKYDPKDIGVNNEGAVKALQF
                     VVDMVKNKHISADMDYAVAEASFNKGQSALTINGPWSWGNIDKSGIKYGVTLLPTLNG
                     QASKPFVGVLSAGVNSSSPNKDLAKEFLENYLLTDDGLDAVNKDKPLGAVALKSYQEK
                     LAADPRIAATMANAKNGEIMPNIPQMSSFWYAEKSAINNAVTGRQSVKEALDDAHSRI
                     QKQQ"
     gene            5246..6784
                     /gene="malF"
                     /locus_tag="PXD69_001350"
     CDS             5246..6784
                     /gene="malF"
                     /locus_tag="PXD69_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HDL6283552.1"
                     /translation="MLTQTQSKSTHWLKYLLAGLVLLLDFYLVVLMYSQGEYLFAILT
                     LIILTSGVYIFTNKNTYAWRYVYPGITGMAIFILFPLVATIAIAFTNYSGSNQLSFER
                     AVSVLTEQRYFAGDKYQFTLYPQADNKYQIALTNPTTEQTFVSEPISLATGTNVVVTE
                     QNRPTGEVAPLKVITQNRAALQSMKVVLPNNNELTMSSLRQFSEQKPRYQFDEENKIL
                     LNNETGKRYQANDETGFFQSIDENGHWQSETLEPGYTVTSGFNNFIKIFTDEGIQKPF
                     VQIFIWTVIFSLLTVVFTVILGMVLACLVQWEALKGKAVYRVLLILPYAVPSFISILI
                     FKGLFNQSFGEINMILNQLFGISPEWFNDPLLAKVMILIVNTWLGYPYMMILCMGLLK
                     AIPADLYEASAMDGASTWQNFSKITFPLLLKPLTPLMIASFAFNFNNFVLIQLLTNGR
                     PDMIGTTTPAGYTDLLVSYTYRIAFEGSGTQDFGLAAAIATIIFLLVGGLALLNIKAT
                     KMEL"
     gene            6837..7727
                     /gene="malG"
                     /locus_tag="PXD69_001351"
     CDS             6837..7727
                     /gene="malG"
                     /locus_tag="PXD69_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HDL6283553.1"
                     /translation="MAIVQSKSVRYRVWATHFILICFLALIIFPLLMVIGISLRPGNL
                     AIGDIIPSQISWEHWQAALGFDVTHADGTVTPPPFPVLRWLWNSIKVATITSIGIVTL
                     STTCAYAFARMKFKGKKTILQGMLIFQMFPAVLSLVALYALFDRLGQYVPFLGLNTHG
                     GVIFAYLGGIALHVWTIKGYFETIDGSLEEAASLDGATPWQAFRLILLPLSVPILAVV
                     FILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLYPQNYLWGDFAAAAVLSAIPITL
                     VFLLAQRWLIGGLTAGGVKG"
     gene            7802..9859
                     /locus_tag="PXD69_001352"
     CDS             7802..9859
                     /locus_tag="PXD69_001352"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HDL6283554.1"
                     /translation="MKNALPYLCLFYTSSLFAQSWQHSHFSDFNDDLEKHFFQSQVQL
                     EKGSYPLRFKFGEQCYQPQQAIKLNQSVALVPCINEAPQLRLFRQGNYLAQIDLRSGT
                     PTPTISVEQQLQHNEAMFQSCPNWDKKPIEIDVSSTFAEGESVSDFYSGNTAIVKNGK
                     VTLMPNENASGLILLEKSNTENTATFDWKNATVYFVLTDRFYNGDPTNDHSYHRQKDG
                     MQEIGTFHGGDLKGLTEKLDYLQQLGVNVLWISSPLEQMHGWVGGGDKGDFPHYGYHG
                     YYHLDWTKLDANMGTEDDLSRFVQQAHQRGIRVLFDVVMNHTGYATLADMQEFNFGGF
                     YLTPDEISRTLGEKWTHWKPKSGQNWHSFNDFIRFNDNQAWQNWWGKEWVRADIADYD
                     SPKFDDLKMSLAALPDLKTESEQAVKLPEFFANKNTNAKTLPNAKVRDYLIGWLSDWV
                     RKYGIDGFRVDTAKHVEKSTWLVLKQSAQQALNEWQKANPNAGFNDRFWMTGEAWGHG
                     VFKSDYYQNGFDAMINFDFQDQAKQGLNCFAHIEPIYAEMNRKLSDFNVLSYLSSHDT
                     RLFFHSDSEQNIEKHKTAANLLLLSPGAVQIYYGDESGRTFGATGSDLIQGTRSDMNW
                     QELQQDPQKQALHQHWQKLTQFRQRHPAIGAGVHQLIKNDSYFAFKRVLNEDKVMVVW
                     AGN"
     gene            complement(9973..12699)
                     /gene="malT"
                     /locus_tag="PXD69_001353"
     CDS             complement(9973..12699)
                     /gene="malT"
                     /locus_tag="PXD69_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HDL6283555.1"
                     /translation="MLIPSKLVCSFRLQNSIPRKRLIQELDKSCSYPVVLINAPAGYG
                     KTTLVSQWIENKKNIGWYALDEGDNNSDRFATYFSAALHSAINEEIDVLLEENRKANL
                     LALFNQLLIKAAAFSEHFYLAIDDYHIIENDEIHEALKYWIKHQPSNMTLILISRSIP
                     PLSIASLRVQEQLLEIDINQLMFDHQESTAFFQARLGSELNQQDVIALCNEVEGWPTA
                     LQLISLFAKNKSHTLQVPLQDIAKRLAKSNHFHINEYLADEVLNKVDEETRLFILRCS
                     VLHSMNESLVQAVTGEQNSRTKLESLEKQGLFLQQMANSKWQSSDDSWWKFHPLFASF
                     LNLCCQNELYAELPQLHQKAANAWLQLGYVTEALHHAMQLSDTGLLLNILSKHAWTVF
                     HQGELKLLEESLNCLDYAHLTEHTNLVLLKAWLVQSQHRHIEVGGILADFSRALTENK
                     IELSKTANAEFNVLRAQVAINSGDENTALQLASEALNDLSENAYYAHIVATSIIGEAH
                     HCHGNLAEALAMLQKAERMARQHHTYHNILWSQLQQSEILLAQGFSQAAYEMLDKASE
                     FVKENHLQKVPMYEFLLRSKGKILWEWYNLDKAESMAVAGMNALSKFEDKLQCLTLLT
                     KISLARGNLDNTARLLGEVEQLEHSHSYHHDWIANADQVRIFYWQMTNDVSAVRNWLI
                     QNPSPVSDKNHFTQVQWRNIARSRILLEEYHEAKAILDNLIETAEKFSLISDLNRALI
                     VRNRLYFLQGEKELAQQDLIQALKLTRQTNFISAFVIEGDVMAQQIRHLLQLNVLDEL
                     VLHKAQFILRNINQFYRQKFAHFDENFVNQLLKNPKVPELLKISPLTQREWQVLGLIY
                     SGYSNEQISDELQVAATTIKTHIRNLYQKIGVTNRNEAISYTKELLMLMGYH"
     gene            12863..15232
                     /gene="malP"
                     /locus_tag="PXD69_001354"
     CDS             12863..15232
                     /gene="malP"
                     /locus_tag="PXD69_001354"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HDL6283556.1"
                     /translation="MTFNSIVEKYCRYFDVTDPKHFTLQQWYQVVAEGSLELIYSQPA
                     TKPTESRHVNYLSMEFLIGRLTGNNLMNLGYYEQIRDYLKQYQVELVDVLEQERDPAL
                     GNGGLGRLAACFLDSMATVGQNATGYGLHYQYGLFKQSFKEGMQKEAADTWARDSYPW
                     HRFNPSKTRHIGFGGKIKHIQADQYEWQPKLTIQGKAFDLPIVGYKNNIIQPLRLWQA
                     DSDQSFDFDAFNEGKFLSADKTIVNAAALTQVLYPNDNHQAGQKLRLMQQYFHCACSV
                     ADILDRHISEGYSLEDLAKRQVIQLNDTHPTLAIPELMRVLLDEHQFTWEQAWDICSN
                     TFAYTNHTLLPEALEQWDQRLFKQLLPRHYQIVEKINDIFHDKVQAEFGDDAKIWEKL
                     AVLFDYRVRMANLCVVTCFRVNGVAEIHSDLLVTDLFPEYHKLFPTKFCNVTNGITPR
                     RWIRQANPQLSDLLDRTLKQDWTHNLELLKGVEQYADDTGFREEYQRIKRNNKVVLAN
                     EIHKTLGLNVNPNAIFDVQIKRFHEYKRQHLNLLNIIATYQSLKANPNQDYTPRLFLF
                     SGKAAPGYYLAKNIIHAINNVADIINNDKQVNDRLQVAFLPDYRVSLAEKIIPAADVS
                     EQISMAGKEASGTGNMKLALNGALTLGTLDGANVEIADMVGEENVFIFGHTVESVREL
                     LAKGYQPKAYYNQDPILKNAVDFLATGKASNGDKEAFKLMLDSLLERDPFLVFADFDS
                     YRQAQEKIGVAYLDQETWLRSAILNTARLGAFSSDRSIKDYQQRIWLNR"
     gene            15314..17392
                     /gene="malQ"
                     /locus_tag="PXD69_001355"
     CDS             15314..17392
                     /gene="malQ"
                     /locus_tag="PXD69_001355"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL6283557.1"
                     /translation="MKITAKQYYRAGIMPYFFDERGVKKTASEKIKHSLFKAFNGNTQ
                     ARETPIPTVNIFYQHQPCFLPFHLADKKHPLTGTWQLQLENSNQIISGKIKARGITLP
                     QDLPLGYHQLQLKTVDKTFNCTIIIAPERCYQPQAVIEQKRLWGTFLQLYTLKSAHNW
                     GIGDFGDLKDFIQQIAPYQADFIGLNPIHSLFPANPNSASPYSPSSRRWLNIAYIDIN
                     QLAEFQQSDEAQTWFHSAEIQQQLSELRTQDWLNYEQIIPLKLKGLRFAFAKFQQNMT
                     ACAAPAFIEFVQKGGESLQVQATFDALHQHLSAQFADQWGWDFWEKAYQDYHSAAVQQ
                     FRETHKTDIEFYLWLQFVADQQLAECDAICRQQNMRIGMYRDLAVGVSPNGAETWNDK
                     QLYCLNASVGAPPDVLGPQGQNWGLTPMNPHVLKQQAYRPFIELVRANMSHCGALRLD
                     HIMSLLRLWWIPKGDSAVNGAYIRYPVDDLIAILALESQRHQCLIIGEDLGTVPKEIV
                     SKLKNAGILSYKIFYFEFDEQGKSRDLQHYPYQAMTTLSTHDLPTINGYWRGYDFELG
                     EKFGVYPNSNILAILKQDRVNAKAKILQRLQEHNVEIAPEISEQLNSPVNTAFIHCLQ
                     TYVANVSSGLFGFQPEDWLGMTEPVNIPGTSTQYANWRRRLSVNLEEIFTDKDIQALL
                     KEVNLIRKNQ"
     gene            complement(17457..19118)
                     /locus_tag="PXD69_001356"
     CDS             complement(17457..19118)
                     /locus_tag="PXD69_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDL6283558.1"
                     /translation="MSEIALTVSLLSLVAVLGLWIGHIKIRGVGLGIGGVLFGGLFVS
                     HFMAQFDVKLDAHTLHFIQEFGLILFVYSIGIQVGPGFFASLKHSGLKLNGFAVLIVL
                     ISGILVILIHKFFNVPLPVILGIFSGAVTNTPSLGAGQQVLAELSAESVTEIMGMSYA
                     IAYPFGIIGILLSMWLIRILFRINIEAEAEAFNKQQNRSKDQLSTLNVRLTNPNIHGL
                     TLKQIPDFNLHEVAYSRLKRGNELSIPRVDTILQIGDILHLVGEESSLRKMQIILGEA
                     VDVSVSTKGTIYRSERAVVTNEKVFGKQIRQLMLKGKYDVVISRLNRAGVELVPTGDM
                     TLQFGDVLNLVGRQADIEMVMTIIGNAHSKLQQVQMLPIFIGIGLGVLLGSVPIYLPG
                     FPVALKLGLAGGPLVVALILARIGSFSKLYWFMPPSANLALREIGIVLFLAVVGLKSG
                     GRFLETLLSSEGVEWICYGAIITFVPLMIAGLIARMYNKVNYLTICGLLAGSMTDPPA
                     LAFANEIKEGNGAAALSYATVYPLVMFLRIMLPQVLAIMLWVSGG"
BASE COUNT         5845 a         4021 c         3673 g         5750 t
ORIGIN      
        1 gacaaggaga atatctatga aaaaaacaat aaatcaattt gaacttacat tttttaagaa
       61 aatttggcgt ggagaagtca gccctaattt ttctgcctcg ttaaccaaat tcatcgcttt
      121 attaatatct tttgctttaa tcgctttcat taccgcctga ttaaaatagg cttccgtatc
      181 tttatctact gctgttttta ctgcaactgg attttctttt atcggcaacg gtatagccgt
      241 tttagctgcc ggcgttgctg ctttgtttga gctgaaaatt tcagtcggta atccaataaa
      301 tttagtgccg ttcgagccgg taacgttgat gtgaatttgc ccttttaaac tgtgtgctac
      361 ttcaatatcg ttaattgctg gtggttgttt accggttgct tttgcatagg tttttgccgg
      421 atgcggcatc atcgtggttt tggctaaatc ttgctgcgtg gtataaatga gcaagtaaat
      481 ataatcttgg ttcattgccg gcgttaaatt aagttctgcc cctaaacggc tacctttgag
      541 tcctcgctct tccaataatt taaactcaga agaggggtaa gttgatgcca cattaaattg
      601 actatccaac acgactgccg tgggtacaaa aacatttttg tccatcaccg ggctttcgat
      661 ttcaatttcc aatgtgcctt gatttgccgg aatacgataa gctgcaaccg ggctggcaat
      721 accggcaaac gctgtggtaa atgcttgttt gtgttgctcg cttagatctg tttttacggt
      781 ttgtgaaaat ggcacatctt gccattgaat ttgagctaat tcagccgagt taatatgaat
      841 agacttacct gccgagccat ttgctatact cggagacacc accaaaagat gggcgaagaa
      901 tattgctgtc gaaagaagcg tttttttcat attaacccct aaaaatcgtg aaataggata
      961 aagtgctgaa atagtgggta ggtaatccta cccacacaaa ggtttgatga ttaccaccaa
     1021 gcttcaaatt gaacaccggt gataaactcg ccgtctttgg ctttatagcc ggcatcggta
     1081 cgagctttcg tgttgaattt atcattccaa cgtgcataag taccaaacac acggattgca
     1141 gggcgagccc aaatgctatt accagcctgc cattgttgtg caacggtgta ttttaccaag
     1201 tcatttttct tgcctgttgc ttgatcttta atgcgatcat aaccaacttc taataatgta
     1261 ctcattgtat cattccattt gtacattggg cgaatacctg ctgagtacca agttttacct
     1321 tgtttattat ctagttttgt tttttcgtag attaaggcat acattacttc aactttatca
     1381 ctcgcttgca ctaccccttg gttgattaaa cgaagcatat tacctttatt atctgctttc
     1441 gaaccctgtg cgtgcccatt attccaagaa gtcatagagt cggttgcata ttgtgcagta
     1501 aatttattga aaccaccaaa gaagttacct tgagtgtatt ccgctgttac catataaccg
     1561 tttttggttg ctcctttttc aagggctgca cctttcttag catgtgcatt accgtaatca
     1621 aagcctaact ctaacgaacc atctttccaa agctcaatac cggctaaccg aacatcaaaa
     1681 atatcgttgt aaacatcggc tttattacgc tgcttatcta atttaatttt acctgtgcta
     1741 ggatctaatt tataaactgt agtatatcca aaagtattcg cccctccacg ctctgtatca
     1801 cgagtaaccg ctaaagagag ttttccgaag cctaaatcaa tattttcaac ccctgcaccc
     1861 ggacctgaaa tatcccagta atagaagtca ttcatatgta catcatggcg ttggtaaaaa
     1921 cgtttaccag cccataaggt ggcacctggt aaactatctg caaagttttt gaactgtaca
     1981 tttaattcac gtagtgctgg acttgttggt gtccaatcat tattgtgaag cgtaccgccg
     2041 taagcaaggt ttgtatcaaa gtagatagat ttctcaccac ttttgaataa ttcctgacct
     2101 aatttcaatt ctgcataggt atcagattcg ttacctaaac ggtattttga accaccacca
     2161 tttaccgtga atgcggattg ctcccccccc cccgatgtcc aaccgatacc tgaacgtgca
     2221 tatccgtgga aatcaaccgc tgatgcactg gctgcgaaca ttgcaccact gattgcaact
     2281 gctaggactg tttttttcat aatagaacct ctcttaagat ttgattttac ttaggttaat
     2341 tattaattga ttagaagatt gaaaataccc tctaaaatca gtaataaact gaaattgtta
     2401 tacccctttt tcaacaaaca aacgtttgca agctgtaccg tcttccttaa ataaatggca
     2461 gcgttccggc aatataccga tattcagatc gtcgccttca ttaactaata ccacatcgtt
     2521 ttgacgataa attaaggttg gttgtttgat ttcagggatt tcaaggtgga tttgtgtttc
     2581 atttccgagc aattccacaa cttgcacaat accgtgtaag gtcacttggg tttgatccga
     2641 aggaactaaa tgttccgggc ggatacctaa agataagtta tctcccacat tcaccccttc
     2701 gccggaaacc ggaatccaaa aattatgatg attcgcatca ggtaactcaa tttttacccg
     2761 ttccggctct accgcaatca cttttaccgg taaaaagttc attttaggcg agccgataaa
     2821 ccctgctaca aagcgatttg ccgggtaatg ataaagttct aacggtttac ctacttgagc
     2881 aataccgccg gcatttaata ccacgatttt gtccgctaat gtcattgctt caacttgatc
     2941 gtgcgtaaca taaatcattg tgcggtttag ttttttatgt aatttggaaa tttctacccg
     3001 catttgtaca cgcaatgcgg catcaaggtt ggaaagtggt tcatcgagta aaaatacttc
     3061 cggttgggaa accagtgttc taccaatagc cacccgttgg cgttgtccgc cggaaagtgc
     3121 tttaggtttt cgatctaata aatgggcaag ctgtaagatt tcggcaactt ggttaactcg
     3181 ttgatcccgc tctgctttac ttacacctgc cagctttaag ccaaaagaca tattttcggc
     3241 aacgtctaaa tgtggataga gagcatagga ttggaacacc ataccgatac cacgttttga
     3301 aggctctact tcattcatca gttttccacc gatatagagt tctcctgtcg taatatcttc
     3361 caaacctgct atcattcgta atagcgtaga tttgccacaa cctgacggtc caacgaaaac
     3421 aacgaattct ccttcgttaa tttctaaatt aatatcctta gagatatgaa catcaccata
     3481 cgattttccc acgttacgta atgatacatt cgccataact aaacctcttt tctgcttttg
     3541 cttgttggtt ttatttaggc tgaatagtcg cctttttatc taaagaagaa atcatcctaa
     3601 aatacttttt tttaggctga atagtcgcct ttttatctaa agaagaaatc atcctaaaat
     3661 actttttttt agggttagag ccatagccat aattatttaa aaaacgccaa ttcagaaaaa
     3721 ttaaataaat tttgtgatca acctctcatt tttaatgcct atttttgtga agcagatcac
     3781 aaaatgataa aaaatgttac ttagatcata cttttagctt ggggggcgta gagcaaaggg
     3841 tgatctcaaa tagattgtat agcccataat ttgccataat ttaataaatg ggttgtttca
     3901 tatccgtttc ttttatttaa cttcaaggag ttttttatga aaaacaaatg tgtcaaattc
     3961 accttagcta ctcttgctac cttagttctt tcaggaacag taatggcaaa aatgacggaa
     4021 ggtaaactcg ttatctggat taacggtgat aaagggtaca atgggcttgc cgaagtcggt
     4081 aagaaatttg aaaaagatac cggtgttcaa gttttagttg aacacccgga tagacttgaa
     4141 gaaaaatttg cacaggttgc ctcaactggt gacggtccgg atattatgtt ctgggctcac
     4201 gaccgctttg gtggttatgc acaatccggt ttattggctg aagtgaatgt aagcaaagaa
     4261 tttaaagata aatttgtcga ttttgcttgg gatgctgaaa cttacaacgg caaaattatc
     4321 ggttatccgg ttgcgattga agcgatttca ttaatttata ataaagattt agtgaaagaa
     4381 gcaccaaaat cttgggaaga aattattgag ttagataaaa aactcaaaaa agagggcaaa
     4441 aatgccatta tgtggaactt atccgagccc tatttcacgt ggccgattgc ggcttcaaac
     4501 ggagcttatg cattcaaatt tgctaacggc aaatacgatc caaaagatat tggtgtgaac
     4561 aatgaagggg cagtaaaagc actacaattt gtagtcgata tggtgaaaaa taaacatatt
     4621 agtgcggata tggactatgc cgttgccgaa gcctccttta ataaaggaca aagtgcctta
     4681 accatcaatg gtccttggtc ttggggcaat attgataaaa gcggtattaa atatggtgta
     4741 actttactcc caacattaaa cggtcaagct tctaaaccat tcgtaggggt gttaagtgcc
     4801 ggtgtaaaca gctcaagccc aaataaagat ttagccaaag aattcttaga gaattattta
     4861 ctcaccgacg acggtttaga tgcagtcaat aaagataaac ctttaggtgc ggtggcgtta
     4921 aaatcttacc aagagaaatt agcggctgat cctcgtattg ctgcaacgat ggcaaatgcg
     4981 aaaaacggtg aaattatgcc aaatattccg caaatgtctt ctttctggta tgccgaaaaa
     5041 tctgctatca ataatgcagt gaccggtcgt caatcggtga aagaagcatt agatgatgca
     5101 cattcacgca ttcaaaaaca acaataattc ttcatcattc tgagtgggtt attatgaccc
     5161 actctatttt tagattcacc ctaaatacaa taaaagtaca gtaaaagtac cgtaacaaaa
     5221 tgcagtaaaa attcgaggtg ctgttatgct aactcaaact caatccaaat ccactcattg
     5281 gctcaaatat ctcttagccg gattagtctt gctccttgac ttctatcttg ttgtcttaat
     5341 gtactcacaa ggtgaatatc tttttgctat tttaacgctg attattctaa cttccggtgt
     5401 ctatattttt accaataaaa atacctatgc ttggcggtat gtttaccctg gcattaccgg
     5461 aatggcaatt tttattttgt ttccgctggt tgcgactatt gcaattgcgt ttaccaacta
     5521 tagtggttct aatcaattat cctttgaacg agcggtatcc gtcttaactg aacaacgcta
     5581 ttttgccgga gataaatatc aattcaccct ttatccgcaa gcagataata aatatcaaat
     5641 tgcattaacc aatccgacga cagagcaaac ttttgtgtca gagccgattt cattggctac
     5701 cggaacgaat gtggttgtaa ccgagcaaaa cagaccaact ggcgaagtcg ctccccttaa
     5761 agtgattacg caaaatcggg ccgcacttca atcaatgaaa gtggttttac cgaataataa
     5821 tgaactgaca atgagctcat tacgtcaatt ctccgagcaa aaaccacgct atcaatttga
     5881 tgaagaaaat aaaatattac tcaataatga gactggcaaa cgttatcaag caaatgacga
     5941 aaccggtttc ttccaatcga ttgatgaaaa cggtcattgg caaagcgaaa cacttgaacc
     6001 aggttatact gtcacatcag gctttaataa cttcattaaa atttttaccg atgaaggtat
     6061 tcaaaaacct tttgtccaaa tatttatttg gacggtgatc ttctctttat taaccgttgt
     6121 ctttaccgtt attctcggta tggttcttgc ctgtttggta caatgggagg cattaaaagg
     6181 taaagcagtc tatcgtgtct tattgatttt accttatgcc gtaccatcat ttatttcgat
     6241 tctgattttt aaaggactat ttaaccaaag ttttggtgag atcaatatga ttttaaacca
     6301 actattcggc atcagccctg aatggtttaa cgatccgctc cttgccaaag tgatgatctt
     6361 aattgtcaat acgtggttag gttatcctta tatgatgatt ttatgtatgg ggttactcaa
     6421 agctattccg gctgatttat atgaagcctc cgcaatggac ggtgcttcca cttggcaaaa
     6481 cttcagtaaa atcactttcc cattactgtt aaaaccactt actccgttaa tgattgcttc
     6541 gtttgcattt aactttaata actttgtatt aattcaacta ttaacaaacg gtcgcccgga
     6601 tatgattgga acaaccactc cagccggtta taccgattta ttagtcagct acacctatcg
     6661 tattgccttt gaaggaagtg gtacgcaaga tttcggctta gcagccgcca tcgcaaccat
     6721 tattttctta ttagtcggtg gcttggcact cttaaatatc aaagcaacca aaatggaatt
     6781 ataaaagcgg gagggattta acaatcccga ccccaaacta actttaggag ttatatatgg
     6841 caattgttca atctaaatct gtgcgttatc gggtatgggc aacccatttc atcttaatct
     6901 gtttccttgc cttaattatt ttccctttat taatggtgat tggcatttcg ttacgaccgg
     6961 gaaatctggc tatcggtgat attattccaa gccaaatttc gtgggaacat tggcaagccg
     7021 ctcttggttt tgatgttaca cacgccgatg gtacagtcac accgccgcca ttcccggtgc
     7081 tacgctggtt atggaactcc atcaaagtgg caacaattac ctctatcggc attgtaacct
     7141 tatctacgac ctgtgcttat gcatttgccc gaatgaaatt taaaggcaaa aaaaccattc
     7201 tacaaggtat gctgattttc caaatgttcc cggcagtgct ttccttagtt gccttatatg
     7261 cgttgtttga tcgtcttggg cagtatgtac cgtttcttgg tttaaacaca cacggtggtg
     7321 ttatttttgc ctacttaggc ggaattgcct tacacgtttg gacaatcaaa ggctactttg
     7381 aaacgattga tggttcattg gaagaagccg cttcccttga tggtgcaacc ccgtggcaag
     7441 cgttccgatt aatcttatta ccgctttcag tgccgatttt ggcggtagtt ttcattcttt
     7501 catttattgc cgccattacc gaagtaccgg ttgcctcact cctattgcgt gatgtaaaca
     7561 gctacaccct agccgttggt atgcaacaat acctctatcc gcaaaactat ttatggggtg
     7621 acttcgcagc agcggcggtc ttatccgcaa ttccgattac gctggtcttc ttattggcac
     7681 aacgctggtt aatcggtggt ttaactgccg gcggcgtgaa aggctagttt gcaaaaaatt
     7741 ctctaaaaac gaccgcttgt cgagctgata ctgcggtcgt caatctttat tagggctgtc
     7801 tatgaaaaat gcgttacctt atctctgctt attctatacc tcaagccttt ttgcccaatc
     7861 ttggcaacat tcccattttt ctgattttaa cgatgatctc gaaaaacatt tttttcaatc
     7921 ccaagttcaa ttggaaaaag ggagctatcc gcttaggttc aaatttggcg aacaatgtta
     7981 tcaaccccaa caagcgataa aattaaatca atcggttgcg ttagtccctt gtataaatga
     8041 agctccacaa ctgcggttgt ttcgtcaagg caactatctg gcacaaattg atctgcgaag
     8101 cggcactccg acacccacaa tcagcgtaga acagcagcta cagcacaatg aagcgatgtt
     8161 tcaaagttgc ccgaattggg ataaaaaacc gattgaaatt gatgtttctt ccacttttgc
     8221 cgaaggcgaa tcggttagcg atttttattc aggcaacacc gctatcgtta aaaacggcaa
     8281 agtcacctta atgcccaatg aaaacgcaag cggtctgatt ttgctggaaa aaagcaatac
     8341 cgaaaatacg gcaacgtttg attggaaaaa tgccaccgtc tattttgtgc tgaccgaccg
     8401 cttttataac ggcgatccga ccaatgacca cagctaccac cgccaaaaag acggaatgca
     8461 agaaatcggc acctttcacg gtggtgattt aaaaggatta accgaaaagc tcgattacct
     8521 acaacaactt ggggtaaacg tattgtggat tagctctccg ttagaacaaa tgcacggctg
     8581 ggttggcggc ggtgataagg gggattttcc gcattatggc tatcacggtt actatcattt
     8641 agattggacg aaattagatg ccaatatggg tactgaagac gatttaagtc gctttgttca
     8701 acaagcccac cagcgtggta ttcgggtgct atttgatgtg gtgatgaacc ataccggcta
     8761 cgcgacgctt gccgatatgc aggagtttaa ctttggcgga ttttacttaa caccggacga
     8821 aattagccgc acattaggcg aaaaatggac acactggaag ccgaaatcag gacaaaattg
     8881 gcacagtttc aatgatttca ttcgctttaa cgataatcag gcttggcaaa attggtgggg
     8941 aaaagaatgg gttagagctg atattgccga ttacgacagc cctaaatttg atgatttaaa
     9001 aatgtcgctc gctgcccttc ctgatctaaa aaccgagagc gaacaagcgg tcaaattacc
     9061 tgaatttttt gcaaataaaa ataccaatgc caaaacatta ccaaacgcca aagtgcgtga
     9121 ttatttaatt ggttggttat ccgattgggt cagaaaatat ggcattgacg gttttcgggt
     9181 tgataccgcc aaacacgttg aaaaatccac gtggctggta ttaaaacaat cggcacaaca
     9241 agccttaaac gaatggcaaa aagccaatcc gaacgccggt tttaacgatc gcttttggat
     9301 gacaggagaa gcgtggggac acggcgtgtt caaaagtgac tattatcaaa acggttttga
     9361 tgcaatgatc aatttcgatt ttcaagatca ggctaaacaa gggttaaatt gctttgccca
     9421 tattgagccg atttatgccg aaatgaatcg caaattaagc gacttcaatg tgttgagcta
     9481 tttatcttca cacgatactc gattattttt ccattcggat agtgaacaaa atatcgaaaa
     9541 acacaaaacc gccgcaaatt tgctgttgct ttcacccggt gcagtgcaaa tctattatgg
     9601 tgatgaaagt gggcggacat ttggtgcgac cggttcagac ctgatacaag gcacccggtc
     9661 ggatatgaat tggcaagagt tgcagcaaga tcctcagaaa caggcattgc atcaacattg
     9721 gcaaaaattg acacaattcc gccaacgcca tccggctatt ggcgcaggtg tccatcaact
     9781 catcaaaaat gatagctact ttgcatttaa gcgtgtgttg aatgaagata aagtgatggt
     9841 ggtttgggcc ggaaattaaa tctactttag cttcaagttt tctctcttct ggggaaaact
     9901 tgaagccggt tcggggaaac aagttgcaaa aaattactaa aaatagaccg cttgttcccc
     9961 atgagcttgt gatcaatgat accccatcaa catcagcagt tctttcgtat agctgattgc
    10021 ttcgttacga ttcgtcacac cgattttctg ataaagattt cggatatggg ttttaatcgt
    10081 ggttgcagcc acttgcaatt catctgaaat ttgttcattg ctatatccgg agtaaatcaa
    10141 acccaatact tgccattccc gctgagtgag cggactaatt tttaagagtt ccggcacttt
    10201 cggatttttc aataattgat tcacaaagtt ttcatcaaaa tgggcaaatt tttggcgata
    10261 aaattgattg atgttgcgta aaataaactg tgctttgtgc aataccagtt catctagcac
    10321 attaagttgc aataaatggc ggatctgctg tgccattaca tccccttcaa tcacaaacgc
    10381 actgataaaa ttcgtttggc gggtgagttt tagtgcctga attaaatctt gctgagccaa
    10441 ttctttctcg ccttgtaaaa aataaagccg gttacgaaca attaatgcgc gatttaaatc
    10501 gctaatcaga gaaaattttt cagccgtttc aattaaatta tctaaaatgg ctttcgcctc
    10561 gtgatattcc tcaagcaaga ttcgagaccg tgcaatattt cgccattgca cttgggtaaa
    10621 atgattttta tctgaaaccg gtgaggggtt ttgaattaac cagttcctca ccgcagaaac
    10681 gtcattggtc atctgccaat aaaatatacg tacctgatcg gcgttggcaa tccaatcgtg
    10741 gtgataagaa tgagaatgtt ctaattgttc gacctcgcct aataatcggg cagtgttatc
    10801 caaattgcct cgagccaacg agatcttcgt gagtaaagtt aagcattgta acttatcttc
    10861 aaatttagat aaggcattca ttccggcaac tgccattgat tcagctttat ctaagttata
    10921 ccattcccat aaaatcttgc ctttagaacg tagcaaaaat tcatacatcg gcactttttg
    10981 tagatggttt tctttcacaa actcgcttgc tttatctaac atttcatagg ctgcttgtga
    11041 aaacccttgg gcaagcaaaa tttcagattg ttgaagctgt gaccacaaaa tattgtggta
    11101 agtatgatgc tgacgtgcca tacgctctgc tttttgcaac attgctaatg cttctgccag
    11161 attgccgtgg caatgatgag cttcgccaat aatagacgtt gcaacaatat gagcataata
    11221 ggcattttct gaaagatcgt ttaacgcttc agacgctaat tgaagtgcgg tattctcatc
    11281 accggaattg atagcaactt gtgcccgtag cacattaaat tccgcattgg cagttttgct
    11341 caattcaatt ttattttcag ttaatgcacg agaaaaatcc gctaaaatac cacctacttc
    11401 aatatggcgg tgctggcttt gtaccaacca ggctttgagt aacaccaaat tagtatgttc
    11461 ggttaaatgg gcgtaatcta agcaatttaa gctctcttcc aataatttga gttctccttg
    11521 atgaaacacc gtccaagcgt gtttgctcaa aatattgagt agtaatccgg tatccgataa
    11581 ctgcattgcg tgatgtaagg cttctgtaac atagcctaat tgtaaccacg cattcgccgc
    11641 cttttgatgc agttgcggta attcagcata taactcattt tggcaacata aatttaaaaa
    11701 ggaagcaaaa agcggatgga atttccacca gctatcatca ctactctgcc acttactgtt
    11761 tgccatttgt tgtaaaaaca aaccttgctt ttcgagagac tctaatttgg tgcgactgtt
    11821 ttgctcccct gtaacagcct gcactaaaga ctcattcatt gaatgcaaaa ccgaacaacg
    11881 caaaataaac aaacgagtct cttcatcgac tttattaagc acttcatcgg ctaaatattc
    11941 gttaatatga aaatggtttg atttggctaa acgtttggca atatcttgca gtggtacttg
    12001 tagcgtgtgt gatttatttt ttgcaaaaag gctaattagc tgaagggctg tgggccaccc
    12061 ttcaacttcg ttacacagtg cgataacatc ttgctgattt aactccgaac ctaatcttgc
    12121 ttgaaaaaaa gcggtacttt cttggtgatc aaacattaac tggttaatat caatttccaa
    12181 taattgttct tgcactctta aactggcaat acttaacggg ggaattgatc gagaaatcaa
    12241 gataagcgtc atattagacg gttgatgttt aatccaatat tttaatgctt cgtgaatttc
    12301 atcattttca ataatatgat aatcatcaat agcaagataa aaatgctctg aaaatgccgc
    12361 ggctttaatc aataattgat taaataaagc taataaatta gctttacgat tttcctctaa
    12421 caatacgtct atttcttcat tgattgctga atgcaatgcc gcactaaaat aagtggcaaa
    12481 acgatctgaa ttattatcgc cttcatctaa cgcataccag ccgatattct ttttattttc
    12541 aatccattgg gaaaccagag tggttttgcc ataacctgcc ggtgcattta tcaatacgac
    12601 cggataactg caagatttgt ctaattcttg aattaaacgt tttcgaggaa tgctgttttg
    12661 taatcgaaaa gaacaaacaa gttttgatgg tattaacata ataaattcaa ttttctctca
    12721 taacaaaata gggatgatat atccaccatt tgtgttctca ctacttcctt ataatcatac
    12781 catacaagat gattattggg atgatttgat tttatttgga ttttacataa tagcgacatt
    12841 catctttaac cgggggtttc ctatgacatt taattctatt gtagaaaaat actgtcgcta
    12901 ctttgatgtg acagatccaa aacactttac cttacagcag tggtatcaag ttgttgctga
    12961 aggttccctt gagctaattt atagccagcc tgcaaccaaa ccgacagaat cacgccacgt
    13021 gaactacctc tcaatggagt tcttaatcgg tcggttaacc ggcaataatt taatgaattt
    13081 aggttattac gaacaaattc gtgactatct taaacaatat caagttgaat tagtagatgt
    13141 tttagaacaa gagcgtgatc cggcattggg taatggcgga ttaggtcgtc ttgctgcctg
    13201 ctttttagat tcgatggcaa ctgtcggaca aaatgcaacc ggctatgggc ttcattatca
    13261 atatggtctg tttaaacaaa gcttcaaaga gggaatgcag aaagaagcag cggatacttg
    13321 ggctcgtgac agctacccgt ggcatcgttt taatccgtct aaaacccgcc atatcgggtt
    13381 tggtggaaaa atcaaacata tccaagccga tcaatatgaa tggcagccta aattgaccat
    13441 tcaaggcaaa gcctttgact tgccgattgt aggttataaa aacaacatca ttcaaccatt
    13501 acgtttatgg caagcagata gtgaccaatc ttttgatttt gatgccttta atgagggtaa
    13561 atttttaagt gccgataaaa cgattgtcaa tgcagccgca ctaactcaag tgctgtatcc
    13621 aaacgacaac catcaagccg gacaaaaatt acgcttaatg cagcaatact tccattgtgc
    13681 ctgctcggtt gccgatattt tagatcgtca cattagcgaa ggttattcgt tagaagattt
    13741 agcaaaacgc caagttattc aactcaatga tacccatcca acgctcgcta tacctgaatt
    13801 gatgcgtgta ctgttagatg aacatcaatt cacttgggag caggcttggg atatttgcag
    13861 caataccttt gcttacacta accatacctt attacctgaa gcacttgaac aatgggatca
    13921 acgcctattt aagcagctat tacctcgcca ttatcaaatt gtggaaaaaa tcaatgatat
    13981 tttccacgac aaagtacagg cagaatttgg tgatgatgca aaaatttggg aaaaattagc
    14041 cgtgctattt gattaccgtg tgcgtatggc aaacctctgc gttgtcacct gcttccgtgt
    14101 aaacggcgtt gcggaaattc actccgatct cttagtgacc gatctattcc cggaatacca
    14161 caaattattc ccaacaaaat tctgcaatgt tactaacggc atcacacctc gccgctggat
    14221 tcgacaagct aatccacaat taagtgattt attggatcgt accttaaaac aagattggac
    14281 acacaatctg gaattattaa aaggcgttga acaatatgcg gatgacaccg gtttccgtga
    14341 agaatatcaa cgcattaaac gcaataacaa agtggtttta gccaatgaaa tccataaaac
    14401 attagggtta aatgtcaatc ctaatgcgat ttttgatgtg caaattaagc gtttccacga
    14461 atataaacgc caacatttga atttgttaaa cattattgcg acctatcaat cgctaaaagc
    14521 taacccgaac caagactaca caccacgtct attcctattc tcgggcaaag ctgcaccggg
    14581 ttattattta gcaaaaaata ttattcacgc tattaataat gtggcagata ttattaataa
    14641 cgacaagcag gtaaatgatc gactacaagt ggcattctta ccggattatc gagtcagtct
    14701 tgcggaaaaa attattccag cagctgatgt atcagaacag atttcaatgg caggtaaaga
    14761 agcctccggt accggtaata tgaaattggc actcaacggc gcattaacct taggtacgct
    14821 agacggtgcc aatgttgaaa ttgctgatat ggtcggtgag gagaatgtct ttatcttcgg
    14881 tcacaccgta gaaagcgtga gggaattatt agcaaaaggc taccaaccga aagcctacta
    14941 taaccaagat ccgattctga aaaatgcggt tgatttctta gccacaggaa aagcctctaa
    15001 cggagataaa gaggcattca agctgatgtt agatagcctg ttggaacgag atcctttctt
    15061 agtctttgcc gactttgata gctatcgcca agcacaagag aaaattggtg tagcctattt
    15121 agatcaagaa acttggctgc gtagtgcaat tttaaatact gctcgtttgg gtgcatttag
    15181 ctcagaccgc tcaattaaag attatcaaca acgtatttgg ttgaatagat aataaattcg
    15241 ggcgacttct acaataaagg aagtcgccta ttttctgctg tatttcatat gtatttatat
    15301 atggagagaa atgatgaaaa taactgccaa acaatattat cgggctggaa ttatgcccta
    15361 ttttttcgat gagcgtggtg taaaaaaaac agcatctgaa aaaataaaac attcgttatt
    15421 caaagccttt aacggcaata ctcaagcaag agaaacacct atccctacgg tcaacatttt
    15481 ttaccagcac caaccctgtt ttttaccttt tcatttagcg gataaaaaac atccgttaac
    15541 cggtacttgg cagctacaac tagaaaattc aaaccaaatt atttccggca aaattaaagc
    15601 aaggggaatt acattacctc aagatttgcc cttaggttat caccaattac agctaaaaac
    15661 ggtagataaa acctttaatt gcaccattat tatcgctccg gaacgctgct accaaccaca
    15721 agccgtcatt gaacaaaaaa gattgtgggg aaccttccta caactataca ccttaaaatc
    15781 agcccacaac tgggggattg gcgattttgg cgatttaaaa gacttcattc aacagattgc
    15841 cccttaccaa gcagatttta tcggcttgaa cccgattcac tcactttttc cggcaaaccc
    15901 gaattctgcc agcccataca gtccatcctc tcgccgatgg ctgaatattg cttacattga
    15961 tatcaatcag ctagcggaat ttcaacaaag tgatgaagca caaacttggt ttcattctgc
    16021 tgaaatccaa caacaattat cagaattacg cactcaggat tggttgaatt acgagcaaat
    16081 cattccgttg aaattgaaag ggctacgctt tgctttcgca aaatttcagc aaaatatgac
    16141 cgcttgcgct gcccctgctt ttatcgaatt tgtacaaaaa ggtggtgaaa gcttacaagt
    16201 tcaagccaca tttgatgccc ttcatcagca tctatcggca caatttgccg accaatgggg
    16261 ctgggatttc tgggagaaag cctaccaaga ctaccactcc gcagccgtgc agcaatttag
    16321 agaaacgcat aaaaccgaca tagaatttta cctttggtta caattcgttg ccgatcaaca
    16381 gctagcagaa tgtgatgcta tctgccgtca gcaaaatatg cgtattggta tgtatcgcga
    16441 tctcgccgtt ggcgtcagcc cgaatggtgc agaaacgtgg aatgacaaac aactttattg
    16501 cttaaatgcc tctgtcggcg ctccgcctga tgtattaggt ccgcaaggac aaaactgggg
    16561 cttaacccca atgaatccgc atgtattaaa gcaacaagcc taccgtccgt ttattgagtt
    16621 agtcagagct aatatgagtc attgcggtgc attacgcctt gaccatatta tgtctttact
    16681 ccgtttatgg tggatcccca aaggcgatag tgcggttaat ggtgcttata ttcgttatcc
    16741 agttgatgat ttaatcgcaa ttttggcact tgaaagccaa cgccaccaat gcctaattat
    16801 cggtgaagat ttaggtactg tgccaaaaga aattgtgagc aagctcaaaa atgcggggat
    16861 tttatcttac aaaattttct attttgaatt tgatgaacaa gggaagagtc gagacttaca
    16921 gcattaccct taccaagcaa tgaccacatt aagcacccac gatttaccga ctatcaatgg
    16981 ttattggcgt ggctatgatt ttgaattagg cgaaaaattc ggcgtctatc ctaattcgaa
    17041 tattttggca atccttaagc aagatcgagt caatgccaaa gccaaaatct tacaacgctt
    17101 acaagaacat aacgtagaga tcgcacctga aattagcgag caacttaatt ctccggtgaa
    17161 taccgcattt attcactgtt tacaaaccta tgttgcaaat gtaagcagcg gattattcgg
    17221 cttccaaccc gaagactggt tgggtatgac tgagccggtt aacattccgg gaaccagtac
    17281 acaatatgca aactggcgac gtcggcttag tgttaacctc gaggagatct tcacagataa
    17341 agatattcaa gccttattaa aagaagttaa tttaatccgt aaaaatcaat aaaagttaga
    17401 taagaaaaaa ggcgactttc cgtcgccttt tgggcttata tgcttgatgt ctatctttat
    17461 ccacctgaaa cccacaacat aatcgctagc acttgaggta gcataatacg caaaaacatt
    17521 actagtgggt aaacagttgc ataggataac gctgcagcgc catttccctc tttaatttca
    17581 ttggcaaaag caagcgctgg aggatcagtc attgagccgg caagtaatcc acaaatcgtt
    17641 aaatagttta ctttgttata cattctggca atcaatcctg ctatcatcaa tggaacaaaa
    17701 gtaataatcg ccccatagca tatccactca acgccctcac tgcttaatag cgtttcgaga
    17761 aatctaccgc cagattttaa accaactacc gctaaaaaca gtacaatacc gatttcacgc
    17821 aatgcaagat tggcacttgg tggcataaac cagtagagtt tactgaaact accaattctt
    17881 gcaagaataa gagcaaccac cagtggtcca ccagccaagc ccagctttaa cgcaacaggg
    17941 aaacccggta aataaatcgg tacagaacca agtaatactc ccaaaccgat cccgataaat
    18001 attggcaaca tttggacttg ttgcaacttt gagtgcgcat tgccgataat cgtcattacc
    18061 atttcaatat cagcttgccg ccctactaaa ttgagaacat caccaaattg taacgtcata
    18121 tcacctgttg gtactaattc tacaccggct cgatttaaac gagaaatgac aacatcgtat
    18181 ttgcctttaa gcattagctg acgaatttgt ttcccgaaga ctttttcatt cgtcactaca
    18241 gcacgttcag aacggtaaat cgtgcctttg gttgagacag atacatctac tgcctcacct
    18301 aaaataatct gcatttttcg taatgaggat tcttcaccta ctaagtgtaa aatatctcct
    18361 atctgtagaa tcgtatctac acgtggaata gaaagctcat tcccccgttt taagcgtgaa
    18421 taagctactt cgtgcaaatt aaaatcagga atttgtttca acgttaaacc gtgaatattt
    18481 ggattagtca gacggacatt taaggtacta agttgatctt tacttctatt ttgctgtttg
    18541 ttaaaagcct ctgcttccgc ctcaatattg attcgaaata aaatccgaat cagccacatt
    18601 gaaagtagaa ttccgataat gccgaacggg taagcaatcg cataactcat tcccataatt
    18661 tcagttacac tctcagcgct taactcagcc aatacctgtt gacctgctcc taaagaaggg
    18721 gtattggtta cagccccgga gaaaatgcct aaaatcacag gcaaaggaac attgaagaat
    18781 ttatgaataa gaataactaa aataccgcta atcagtacaa tcagtaccgc aaaaccattg
    18841 agttttaagc cagaatgttt tagtgaggca aagaatccag gtcctacttg aattccaatt
    18901 gaataaacaa ataaaatcag cccgaactct tgaataaaat gaagcgtatg ggcatcgagc
    18961 ttcacatcga attgcgccat aaaatgggag acaaacagcc caccaaataa cactccccct
    19021 atacctagcc ccacgcctct gattttaata tggccaatcc ataagcctag aacggccact
    19081 aaagataata aactgacagt aagtgcaatt tcgctcatta cagcctctct ttaatatgaa
    19141 atacctcaaa aatggtatcc aattctacca aatctcaaaa acgaaaaatg agatctatgt
    19201 caaaaaaata aaatattgat agtattactc caagatgaac ttcaaaaaag ttcctgaatt
    19261 taaaaaaaat tctcgacaat acttttttt
//
LOCUS       DANLXO010000047        18622 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.047, whole genome shotgun sequence.
ACCESSION   DANLXO010000047 DANLXO010000000
VERSION     DANLXO010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18622
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.047"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..168
                     /locus_tag="PXD69_001357"
     CDS             <1..168
                     /locus_tag="PXD69_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283559.1"
                     /translation="THATEYQTTLGVMKRILEPMLADFEVDPFEEAHYHKALTTLRQY
                     QPKGLGGLVRI"
     gene            404..895
                     /locus_tag="PXD69_001358"
     CDS             404..895
                     /locus_tag="PXD69_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6283560.1"
                     /translation="MQTKPILDACCGSRMFHFDKQNPLVLFADNRQIETTMKDRDKIR
                     HLEIKPDVLHDFTNMPYENESFWHIVFDPPHLVQGGENSWLVKKYGKLPCNWREVLKK
                     GFDECMRVLKPNGTLIFKWNETQIPVSEILKVIDCQPIYGHKSGRLNQTHWLAFVKIE
                     QSL"
     gene            922..1179
                     /locus_tag="PXD69_001359"
     CDS             922..1179
                     /locus_tag="PXD69_001359"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283561.1"
                     /translation="MEQIKLSEKAERALILSQLNENSAMIIDLDDVALILNCGYDYVQ
                     SKISKKPGFPEPVQGINGKSVLFKSGDVIRWVNRQARTRKN"
     gene            complement(1176..2165)
                     /locus_tag="PXD69_001360"
     CDS             complement(1176..2165)
                     /locus_tag="PXD69_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL6283562.1"
                     /translation="MASIRKRGSKYQVEISKKGVRKSATFRTKAEAQAWAYEEERKIE
                     IISKGGVVDILFAEALERYQNEVSINKRTWRREIGRINNILKEPIANRYVQDIKRDDI
                     EDWIEARLKRGLKGSSVERDLSILSNVFTYCLKRWGYISENPMIGVIHPNKVPPRKQR
                     YSQEDIDKILEVSKYREDIKRSNARLAAAMLFAIETAMRAGEISGLTWDNVNFEKRIA
                     HLPMTKNGSSRDVPLSSKAIEILKRLETIKKDNSVFQLPQGNGLSARFFELKEKAGLS
                     YLNFHDTRREALSRLAKKVDVMTLAKISGHKDVKILLNTYYAPNMEEVAHLLD"
     gene            2638..4041
                     /gene="asnS"
                     /locus_tag="PXD69_001361"
     CDS             2638..4041
                     /gene="asnS"
                     /locus_tag="PXD69_001361"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDL6283563.1"
                     /translation="MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYD
                     GSCFDPIQAIINNDLPNYNAEVLHLTAGCSVVVTGKVVESPAEGQAVELQASKVEVLG
                     WVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYW
                     VATPVITASDTEGAGEMFRVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAE
                     TYACALSKVYTFGPTFRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFK
                     AVLAERKDDMEFFVKHVDKEAISRLENFINSPFAQVDYTDAIEILLKSGKEFEFPVSW
                     GIDLSSEHERFLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII
                     GGSQREERLEVLDQRMNEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQ
                     NIRDVIPFPRAPRNANF"
     gene            complement(4141..5133)
                     /gene="epmB"
                     /locus_tag="PXD69_001362"
     CDS             complement(4141..5133)
                     /gene="epmB"
                     /locus_tag="PXD69_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDL6283564.1"
                     /translation="MQPIQIKPLWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKL
                     FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPLEEQQSPAPNILHKY
                     HNRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAVWQQGLTYIAEHPELEEVILSGGD
                     PLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVT
                     HINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPY
                     YLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVPKLAREIAKEPNKILKG"
     gene            complement(5187..5756)
                     /locus_tag="PXD69_001363"
     CDS             complement(5187..5756)
                     /locus_tag="PXD69_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283565.1"
                     /translation="MKKLITLSAILAVSVATVAEAKRGGGSFRSVSPSKAVATKPVAS
                     QKSTTNQQTQQKDATFANTPNSATAQPQVRQGSTMANVAMGAAAGYILGDMMSSNAHA
                     NQPSQPADANAQAVNSAQNVANGAVPAIAEFKSIGGQIDPFLVEKTDGYRRYCISGVQ
                     YLVAAQGVQTSPTVMVNPNGTPLQCNLIP"
     gene            5923..6489
                     /gene="efp"
                     /locus_tag="PXD69_001364"
     CDS             5923..6489
                     /gene="efp"
                     /locus_tag="PXD69_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDL6283566.1"
                     /translation="MASYSTNDFKKGLKFIQDGEPCVIVENEFVKPGKGQAFTRTKIR
                     KLISGKVLEINFKSGTSVEAADVVDSNYNYSYSDGDFWYFMHPETFEQISVDEKALGD
                     NVKWLVDNAECIVTLWNGSAIAVTPPNFVELEIVETDPGLKGDTAGTGGKPATLSTGA
                     VVNVPLFVQIGEVIRVDTRSGEYVSRVK"
     gene            complement(6556..7446)
                     /locus_tag="PXD69_001365"
     CDS             complement(6556..7446)
                     /locus_tag="PXD69_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6283567.1"
                     /translation="MKENLNDLRAFLLVAQTSSFTKAAAQMGVSQSALSHSIRGIEER
                     LQIKLFHRTTRSISTTEAGERLYQRLLPLFDEIDQEVNGLSEFRNALKGGLRINGNEH
                     VFRDVLADKFAEFVKRYPEVALELVAEDRFVDIVAERFDAGIRLGADVAKDMIALRIS
                     PDVKMTAAASPNYLAQHGTPKTPFDLTEHHCLKHRLATLGGILAWEFRDPITKKIVKF
                     QPQGNLTANNGFLLQHYAKQGLGILWSPQDSIQTELDNGSLVPILTDWAMQYEGYHLY
                     YPNRRQNSPLLKALIDVLRG"
     gene            7553..8128
                     /locus_tag="PXD69_001366"
     CDS             7553..8128
                     /locus_tag="PXD69_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDL6283568.1"
                     /translation="MKQILILGASGSLANVVIPELLKDNNVQLTLFARRPQSVAKFET
                     ERVKIVQGDVLDFHALTQAMQGVDAVYAGLAGDLKAMAGNVVNAMNEAQVKRLVWISS
                     MGIYGETGEDHGAILEPYRQSAAVIEASELDYTVVRPGWFTNGSEVQYQLTHKGEPFK
                     GHSVSRKSIADFVARILRENSEIRESVGIAA"
     gene            8179..8622
                     /locus_tag="PXD69_001367"
     CDS             8179..8622
                     /locus_tag="PXD69_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL6283569.1"
                     /translation="MNLQQIQDRLALKDLVDTFSNLADEKKVAEQMPLFTQDAVVNTY
                     IGGKLVFEMHGVAEIEQVFTTFLTPFHSVYHLNGQHTVPFIDENNATAINYCAVKLVE
                     TKEGKEILHDHSVRYADTYVKQEGKWRIAKRIANFMISESREIRQ"
     gene            8783..10453
                     /gene="glnS"
                     /locus_tag="PXD69_001368"
     CDS             8783..10453
                     /gene="glnS"
                     /locus_tag="PXD69_001368"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HDL6283570.1"
                     /translation="MSEEILTAETGTRANFITHIIDEDLASGKHNNVYTRFPPEPNGY
                     LHIGHAKSICLNFGIAQDYNGLCNLRFDDTNPVKEDVEYVDSIKQDVEWLGFKWEGEP
                     RYASDYFDQLYGYAIELINKGLAYVDELSPDEMREYRGTLTEPGKNSPYRDRSVEENL
                     ALFEKMKNGEFAEGKACLRAKIDMASPFIVMRDPVLYRVKFAHHHQTGDKWCIYPMYD
                     FTHCISDAIERITHSLCTLEFQDNRRLYDWVLDNISIERPLPHQYEFSRLNLEGTLTS
                     KRKLLKLVTDGIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSAL
                     EACIREDLNENAPRAMAVINPVRVVIENFGEKEILKAPNHPNRPELGERDLPFTREIY
                     IDEADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDASGRISTIFCTYDPDTLGK
                     NPADGRKVKGVIHWVSAEDNKPAEFRIYDRLFTVPNPGAEEDINAVLNPESLVVKHGF
                     VESSLAHAKPEQDYQFEREGYYCLDSKDGSADNLVFNLTVSLKESVAF"
     gene            complement(10720..11685)
                     /locus_tag="PXD69_001369"
     CDS             complement(10720..11685)
                     /locus_tag="PXD69_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6283571.1"
                     /translation="MIITMKDIAKEANVSLGTVSNVLNGKSNVSLAKIEKVQAAVEKL
                     GYRKNIQASTLKSGTSNKIAIILPNITELKYACLYENLDLICTQNDLSLILYLTHNRE
                     DREKQIIQNIKQDNYLRIILDSCLNNADYYYDEVKDQDKFIFVYRYLKNAKHFIGFDY
                     LPVIGDLIKHMKAHHLENIAFIKDNNCDWGGTVCDYLASYSQKNNIKILFFTQKESIH
                     KLSFELAQSIHRFDGIIVPSFDSAKILYSSFCLSNKIPPKIYTCYKNSFNNDDRFFQY
                     RLDYDFISNQILSILREDNAIIKEHHFWFPKIIESSNNTLPHNLK"
     gene            complement(11847..13187)
                     /gene="gdhA"
                     /locus_tag="PXD69_001370"
     CDS             complement(11847..13187)
                     /gene="gdhA"
                     /locus_tag="PXD69_001370"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HDL6283572.1"
                     /translation="MSDLNALFQKIKQRDPNQAPFHQAVEEVFGSLAPFLAKNPKYTQ
                     QGLLGRIVEPERVISFRVTWVDDKGQVQVNRGYRVQMNSAIGPYKGGIRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMSELYRHIGADTD
                     VPAGDIGVGGREIGYMFGQYKKLRNEFTSVLTGKSLTWGGSLIRPEATGYGAVYFAES
                     MLATKGQQIEGKSVVISGSGNVAQYAAEKVIQKGGKVLTVSDSNGYVLFPESGMTEAQ
                     LQALLELKNERRERLSVYATEQGLKYFDGQKPWGVKCDIALPCATQNELDTEDAKELV
                     KNGCICVAEGANMPTTLGGVEVFIGAKILYAPGKAANAGGVATSGLEMSQNAIRLSWS
                     REEVDQRLFNIMKAIHENCVENGTEADGFVNYVNGANIAGFKKVANAMLEQGIV"
     gene            complement(13380..13721)
                     /gene="bamE"
                     /locus_tag="PXD69_001371"
     CDS             complement(13380..13721)
                     /gene="bamE"
                     /locus_tag="PXD69_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HDL6283573.1"
                     /translation="MKMKSLLAAMLLALGVTACSTVEKVVYRIDVPQGNYLEQDKIAQ
                     LKVGMTAEQVEYLLGTPMLKNIFETHRWDYVFIKREGYKDPEQRNLFIYFDAKGLVSK
                     IDDSNANAEQK"
     gene            complement(13788..14789)
                     /gene="yejK"
                     /locus_tag="PXD69_001372"
     CDS             complement(13788..14789)
                     /gene="yejK"
                     /locus_tag="PXD69_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HDL6283574.1"
                     /translation="MSINVSEIVLHQLQKTEGENPELNTFLRENLLAISPEVDQMMLQ
                     LHQAYQSKAKAYGIFKPESVFAQQLNRLLEQETDFLPFSHSCAKMLAAELIKYPFADG
                     GTFILCRYTFLATEYLFIALIDSRNSMLVDEQLEIKRTQYLEIAQYDIACRINLTELK
                     LDATSNRYLTFVKGRVGRKIADFFMDFLSAEEGFNPQLQNQTLLQAVSDYCEQGELSA
                     PQTREVKKQVFEYCKGQINSGEEIALNELSNALPTLNEIDFAQFTQEQEYGLEENIPP
                     MRNALKTLTKFSGSGKGVTISFNAELLGERLLWDELNDTLTIKGLPANLRDQLERNK"
     gene            14870..15256
                     /locus_tag="PXD69_001373"
     CDS             14870..15256
                     /locus_tag="PXD69_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL6283575.1"
                     /translation="MTVIHTENAPAAIGPYVQAVDLGNMVLTSGQIPVNPETGEIPSD
                     IVQQTRQSLNNVKAIIEQAGLTVADIVKTTVFVKDLNDFAKVNAEYQAFFQENEHPNF
                     PARSCVEVARLPKDVGIEIEAIAVRR"
     gene            15288..16025
                     /gene="pgeF"
                     /locus_tag="PXD69_001374"
     CDS             15288..16025
                     /gene="pgeF"
                     /locus_tag="PXD69_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDL6283576.1"
                     /translation="MDKIIPNWNVPKHIHALTTLRTGGVSKPPFDSFNLGDHVNDEPQ
                     DIAQNRALLVEKFQLPQAPLFLTQTHSTRVIELPYSGDNIKADAIYTNQPNQVCLVMT
                     ADCLPVLFASQDGSEIAAAHAGWRGLCDGILEATVEKFNCPPHEISAWLGPAIGPNAF
                     QVGSEVADQFCAFDPRAKEALIEDSTTSGKFLGNLYQIATQRLNKLGITAISGGEYCT
                     YSQPELFFSYRRDKQTGRMATLIWRTE"
     gene            16119..16194
                     /locus_tag="PXD69_001375"
     tRNA            16119..16194
                     /locus_tag="PXD69_001375"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16152..16154,aa:Ile,seq:cat)
     gene            16397..17611
                     /locus_tag="PXD69_001376"
     CDS             16397..17611
                     /locus_tag="PXD69_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6283577.1"
                     /translation="MTATKKPLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLAEARLKRDELNTLVLQGLDPFEHLAKMQREAKEK
                     QESIQSFAYKWADWKLSKGKCKPKTMEKCLQRLENHLFPRFEGYTLEDFTLTDTINRL
                     TDLDRIMPDTLHRIAGNLIEILDYAVLCGRINFNPISVIKKAFSSVSTTHQPAIMPEE
                     LAEFMQDLQKSNRTPQIKLLVEWQLLNILRPFEAVAVQWSDIDWETKTLNIPADRMKG
                     GKNPHSVPLTKQAIAILEEMKKYNGHHKHIFTHRTDRNKPANSQTVNNAIKRLSGGKY
                     KGLLVAHGLRSIASTYLHERFTTETLVIEACLSHTNKDTVMSAYHRKNWLDRRRGIMQ
                     EWADFVEQCKSI"
     gene            18081..18287
                     /locus_tag="PXD69_001377"
     CDS             18081..18287
                     /locus_tag="PXD69_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HDL6283578.1"
                     /translation="MENTPAKQRFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGA
                     NSKVWLESEIQQWIQRKIEQHRNQ"
     gene            18297..>18622
                     /locus_tag="PXD69_001378"
     CDS             18297..>18622
                     /locus_tag="PXD69_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283579.1"
                     /translation="MTLETFNQQKAKFHEQEKAVLAIQTELDKAKNILEALQNEKAEF
                     VARQKTNLANIGTLSADEYVEIKNKNSGLQARIEYYQALIVDLENKCYAEQEILFQQQ
                     NELKQI"
BASE COUNT         5747 a         3904 c         3611 g         5360 t
ORIGIN      
        1 acgcacgcta ccgagtatca aaccacgctt ggcgtaatga agcggatact tgaaccgatg
       61 ttagccgact tcgaggtcga tccgtttgaa gaggctcact accacaaagc cctaactacc
      121 ttaaggcaat accagccgaa aggcttaggc ggcttagtcc gaatttaatt tgcaaaaaaa
      181 tcacacaatc cgaccgcttg tgaaacaaca agcggcggat ttccataccc aaattttgag
      241 gacaagccga tgaaatacgc aaaaatcatt ctatttttaa ccgcctttgc agttgctgct
      301 gaccatctag agttacgcaa cgactgcgat ggcaaaattt gtatggctca acgctaatta
      361 acccaaccgc ttgttccgca agcggttatt ttttggagga aaaatgcaaa caaaaccgat
      421 attagatgcg tgttgtggtt cccgtatgtt tcattttgac aagcaaaatc cactcgtcct
      481 gtttgctgat aatcgacaaa tagaaaccac aatgaaagac cgagacaaaa tccgccattt
      541 agaaatcaaa cctgatgttt tacacgattt cacgaatatg ccatacgaaa acgagagttt
      601 ttggcacatt gtttttgatc cgccacattt agttcaaggt ggagaaaata gctggcttgt
      661 aaagaaatac ggcaaattac cttgcaactg gcgagaagtc ttgaagaaag gctttgacga
      721 atgtatgcga gtgctaaaac caaacggcac gcttattttc aagtggaatg aaacacaaat
      781 ccccgtttca gaaattttaa aagttattga ttgtcagccg atttatggac acaaaagcgg
      841 acgcttaaac caaacacatt ggctggcgtt tgtgaaaatt gagcaatccc tctaaatgag
      901 gggtttattt ttggagagaa tatggaacaa attaaacttt cagaaaaagc ggagagagcc
      961 ttaattcttt ctcagctcaa cgaaaattca gcaatgatta ttgatttaga tgatgttgcc
     1021 ctgattttga attgcggata tgactatgtg caatccaaga tcagtaaaaa gcccggtttc
     1081 ccagagccag tgcaaggcat taacgggaaa tcagttcttt tcaaaagtgg cgatgttatc
     1141 cgttgggtca accgtcaagc acgaacacgc aaaaattaat ccagcaaatg agcgacttct
     1201 tccatatttg gggcgtagta agtgttaagc aaaatcttca catctttatg ccctgaaatt
     1261 ttggctaagg tcatcacatc gacttttttt gccaagcgtg aaagagcctc tctcctcgtg
     1321 tcgtgaaaat tcaaataaga aagcccagcc ttttctttta actcaaagaa tctagcactt
     1381 aaaccattcc cttgtggaag ctgaaaaacg gaattatcct ttttgatggt ttccagtctt
     1441 ttcaagatct cgattgcctt tgatgataac ggaacgtctc ttgatgaacc gttttttgtc
     1501 ataggcaaat gagctattct tttctcaaaa ttcacattat cccacgttaa acccgaaatc
     1561 tcaccggcac gcattgccgt ttcaatcgca aataacatag ccgcagccaa tcgagcatta
     1621 gagcgtttaa tatcttctcg gtatttgctg acttctaaga ttttatcaat atcttcctgg
     1681 gaataacgct gttttcttgg tggcactttg tttgggtgaa taacaccgat catcggattt
     1741 tcactaatat agccccagcg ttttaagcag taggtaaata cattgcttaa aatagacaaa
     1801 tccctctcaa cacttgagcc ttttaaccct ctcttcaatc tagcttcgat ccaatcttca
     1861 atatcatctc gcttaatatc ttgtacataa cgattcgcaa taggctcttt caatatgtta
     1921 ttgattcgac ctatctctcg tcgccacgtc ctcttattaa tcgatacttc attttgatac
     1981 cgctctaacg cttccgcaaa taaaatatca actaccccac ctttcgagat gatctctatt
     2041 ttacgctctt cttcgtaagc ccatgcctgt gcctctgctt ttgtgcggaa ggtagctgat
     2101 tttctcaccc ctttcttcga gatttcgact tgatatttac tgccccgctt gcgaatgctc
     2161 gccatatttt tacctgcctt ttgtcgtaaa tttgtcgtaa tttataccat acaataaccg
     2221 acaataacag ataataaccg attttatgaa atcatcttaa ggcaaagaag agaggaaaaa
     2281 cttaagataa cctattgaaa taactataat aaacgataat aaccgacaaa aaacggaaat
     2341 aaaaaaaagc ccctaatcaa aaaagcgaaa aggggcggaa gtcttaccta aggaaatatg
     2401 aaaaaaactt gcataaatct gttacatata ctcagactgc ctaactgaac gaaagttcat
     2461 taaaaaataa aaaatttttt aacaccaagc aaaatcagat ttaactactt gcaatgctta
     2521 tatagactca caaatttgca aataattccg taaaattatt atatttcccc ctattttctt
     2581 gtagaatacg gaacgtttct tatattaaaa ctcacaacaa agaatttgag gtattcaatg
     2641 tctaaatttc caacagtttc ggaaatccta tccggcaaga tagcggtagg tgaagaagcg
     2701 acagtgcgtg gttgggtgcg tacccgccgt gattcaaaag ccggtttatc tttcttgagc
     2761 gtttacgatg gttcttgctt tgacccaatt caagcgatta ttaataacga tctaccaaat
     2821 tataatgccg aagtattaca tttaaccgca ggttgctctg tggtggtgac cggtaaagtt
     2881 gtggaatccc ctgctgaagg tcaagccgtt gaattacaag caagtaaagt ggaagtgctt
     2941 ggttgggtgg aagatcctga tacctaccca atggcagcga aacgccactc tatcgaatat
     3001 ctgcgtgaag tcgctcactt acgccctcgt acgaacttaa tcggtgcagt tgctcgtgtt
     3061 cgtcactgtt tagctcaagc tatccaccgt ttcttccacg agcaaggttt ctattgggta
     3121 gcaacacctg taattaccgc ctcagatact gaaggtgcag gtgaaatgtt ccgtgtttct
     3181 acgctggatt tagaaaatct acctcgtggc gaaaacggca aagtggattt taaccaagat
     3241 ttcttcggta aagaatcgtt cttaaccgta tccggccagt taaatgcgga aacctatgcg
     3301 tgtgccttaa gtaaagttta tactttcggt ccgacattcc gtgcagaaaa ctcaaacaca
     3361 actcgccatc ttgcagaatt ctggatgatg gagccggaag ttgcctttgc cgacttaaac
     3421 gacaatgcaa aattagccga agatatgctg aaatatgtgt ttaaagcggt gcttgcagaa
     3481 cgtaaagatg atatggaatt tttcgttaaa cacgttgata aagaagcgat tagtcgttta
     3541 gaaaacttta tcaattcgcc atttgctcaa gtagattaca ccgatgcgat tgagatctta
     3601 ttgaaatccg gcaaagaatt tgaattcccg gtgtcttggg gaatcgatct ttcctctgaa
     3661 cacgagcgtt tcttagccga agaacacttt aaatcgccgg tggtcgtgaa aaactatcca
     3721 aaagacatta aagccttcta tatgcgttta aatgatgacg gcaaaacggt tgccgcaatg
     3781 gacgttttag ctccgggaat cggtgaaatt atcggtggtt ctcaacgtga agaacgttta
     3841 gaagtgttag atcagcgtat gaatgaaatg ggcttaaacc ctgaagatta ctggtggtat
     3901 cgtgatttgc gtaaatacgg tacagtgcca cactcaggtt tcggtttagg tttcgagcgt
     3961 ttaatcgtgt atgtaaccgg gttacaaaac attcgtgatg taatcccatt cccacgtgct
     4021 ccacgcaatg cgaacttcta atttgcaaaa aagtaagaga atttaaccgc ttgcaacaag
     4081 cggttaaaaa aggcgaaaat tttaccattt tcgccttttg tttcttgatt tctgtttaag
     4141 ctaacctttc aaaattttat ttggctcttt cgctatttct cttgccagct ttggcacaag
     4201 atagcctgaa gtgatacgct gtaattctcg gtaaatctca ccagcctgtt catcttcaat
     4261 atagaaatgg ctcgcccctg ccactttatc aaataaatgc aaatagtaag gcaaaatccc
     4321 atattcaaaa agtttatcac ttaacctttt taaggtttga gcattatcgt ttacaccttt
     4381 taacatcacc gattgattca gcaatacaac gccggctttt ttcagttgag ccattttgtt
     4441 tgcaaaaaca gcatcaattt cattggcgtg attaatatgg gtaaccaaca cgacattcaa
     4501 gcgagatttt gataaccgtt cacataattc tgtcgtaatt cgattgggaa taacgaccgg
     4561 caagcgtgaa tgaatacgca gggttttgat atgcgaaatc tgctctaatt gcgttaatat
     4621 ccaatctaag tcctgatctt ttgccatcag cggatcacca ccggacagaa tcacttcctc
     4681 cagctcggga tgctcagcaa tataagttag tccctgttgc cacacagctt taccgctttt
     4741 cacttcctca taagggaaat gacggcgaaa acagtaacgg cagttaatcg cacaactgtt
     4801 ttttagcata aataacaaac ggttatggta tttatgtaaa atattcggtg ctgggctttg
     4861 ttgctcttcc aatggatcta ccacaaaccc ttctgcctca ataaattccg cctgtaaaga
     4921 cattgcttgc aaaaaaagcg gatcgtttgg gttacccttt tccatttttt cggcgaacat
     4981 tcttggcact cgaagagcaa ataatttacg ggcagctata tcgccctcaa aatcatttgg
     5041 attgagttca agaaattgta ataagtcgat agggttatta aaggcttgag ccagctcggt
     5101 tagccaaagc ggtttgattt gaattggttg cattgaatat tgtagataca aggggcaggt
     5161 ttttgcctgc ccgcaaataa aaataattat ggaattaagt tacattgtaa tggcgtgcca
     5221 tttggattaa ccattacagt tggtgaggtt tgtacacctt gtgcagcgac taggtattgc
     5281 acgcctgaaa tacaataacg gcgataacca tcggtttttt ctactaaaaa cggatcgatt
     5341 tgaccgccaa tactcttaaa ttctgcaata gcaggaactg ctccatttgc aacattttgt
     5401 gcagaattga ccgcttgtgc atttgcatcc gcaggctggc taggctgatt tgcatgtgca
     5461 tttgatgaca tcatatcacc taaaatataa ccggctgctg cccccatcgc tacatttgcc
     5521 atcgtgctgc cttgacgcac ttgtggctgg gcagttgcac tgtttggcgt attggcaaaa
     5581 gtagcatctt tttgttgcgt ttgctgattt gtggttgatt tttgagaagc taccggctta
     5641 gttgctaccg cttttgacgg gctaactgaa cggaagctcc caccgccacg ttttgcctct
     5701 gccacggttg caacagaaac ggctaaaatc gcagaaagag taatcagttt tttcattcgc
     5761 attccttatc aataaagttt gaaaaattat agcaaaaatc gcaagagatc tttcgctaat
     5821 tttgtgaatt taggttatta tatggctctt tttgacaaac ccaatagggt tgggttcaaa
     5881 atttgttaat ttattgttat tttttaaata attgaggaaa taatggctag ctacagcact
     5941 aacgacttta aaaaaggttt aaaatttatt caagatggcg aaccttgtgt aattgttgaa
     6001 aacgaattcg taaaaccggg taaaggtcaa gcatttaccc gtactaaaat ccgtaaatta
     6061 atctctggca aagtattaga gatcaacttc aaatcaggca cttcggttga agcagcagat
     6121 gtagtagatt ctaactacaa ctactcttac agcgatggtg atttctggta ctttatgcac
     6181 cctgaaacct ttgaacaaat ctcggtagat gaaaaagcgt taggcgacaa cgtaaaatgg
     6241 ttagttgata atgcagaatg tatcgtgact ttatggaacg gttcagcaat tgcagtcaca
     6301 ccaccaaact tcgttgagtt agaaatcgtc gaaaccgacc cgggcttaaa aggcgatact
     6361 gcaggtacag gcggtaaacc ggcaacatta agcaccggtg ctgtggtaaa cgtgccttta
     6421 ttcgttcaaa tcggtgaagt tatccgtgtg gatacccgtt caggcgaata tgtttctcgt
     6481 gtgaaataat ttagcttctc tacaagtggt cgttttttgg tcaatttttt gctaaaaacg
     6541 accgctcatt tttacctatc ctctcagcac atcaattaac gctttcagca aaggcgaatt
     6601 ttggcgacgg ttggggtaat agagatgata gccctcatac tgcattgccc agtcggttaa
     6661 aatcggcacg aggctgccgt tatccagctc ggtttgaatg ctgtcttgcg gactccaaag
     6721 aatgcctaaa ccttgtttgg catagtgttg cagcaagaag ccgttattgg cagtaagatt
     6781 gccctgcggt tgaaatttaa cgattttctt ggtgatggga tcccgaaatt cccacgccag
     6841 aatgccgccc aatgtcgcaa gacgatgttt gagacaatga tgttcggtta aatcaaaggg
     6901 cgttttcggc gtgccgtgct gtgccaaata gttggggctg gcagctgcgg tcattttcac
     6961 atcgggcgaa atgcgtagtg caatcatatc tttcgccaca tctgccccaa gccgaatacc
     7021 ggcatcaaaa cgctcggcga caatatctac aaagcgatct tccgccacta gctccaatgc
     7081 tacttcaggg taacgtttga caaactcagc gaatttatct gccagcacat cacggaaaac
     7141 gtgttcatta ccgttaattc tcagcccgcc ttttaacgca ttgcgaaact cactcagccc
     7201 atttacttct tggtcgattt catcaaacag cggtaacagc cgttgataca gcctctcccc
     7261 tgcctcggtg gttgaaatgc tacgagtggt gcgatgaaac agcttgattt gcaaccgttc
     7321 ttcaatcccc cgaatgctgt gcgacaacgc cgactgcgac acgcccatct gtgctgctgc
     7381 tttggtaaaa ctgctcgttt gtgctaccaa caaaaaagct cttaaatcgt tgaggttttc
     7441 tttcatttaa ccaccttatt aatgaatttt tctcattact tcaagcgatt ttaccctact
     7501 aatcaaatgc aatctacacc gctatactga cttcattcaa tggagaacag caatgaaaca
     7561 gatcttaatt ttaggagcaa gcggtagcct agcgaatgtc gtgattcctg aactgctaaa
     7621 agacaataat gtgcaattaa ccctttttgc ccgtcgtccg caatcagtag cgaaatttga
     7681 aactgaacgc gtcaaaattg tgcaaggcga tgtgttggat ttccacgcat taacccaagc
     7741 aatgcaaggc gttgatgccg tttacgctgg acttgccggc gacttaaaag cgatggcggg
     7801 aaatgtggtg aacgcaatga atgaagctca ggtaaaacgc ttggtttgga ttagctcaat
     7861 ggggatttat ggcgaaaccg gcgaagatca cggggcaatt ttagagcctt accgccaatc
     7921 ggcagccgtg attgaagcca gcgagttgga ttataccgtt gtccgcccgg gctggtttac
     7981 caacggttcg gaagtgcaat atcagctgac tcacaaaggc gaaccgttca aaggacacag
     8041 cgtttcccgc aaatccattg ccgattttgt ggctcgcatt ttgcgtgaaa acagcgaaat
     8101 ccgtgaaagt gttggtattg cagcctaaca agcggtgaaa aaccaaagaa aatttgcaaa
     8161 aatcagaagg aaaacacaat gaacttacaa caaatccaag atcgtttagc actaaaagat
     8221 ttagtagata cattctctaa ccttgccgat gaaaaaaagg ttgccgagca gatgccgctt
     8281 ttcacgcaag atgccgtcgt aaacacctac atcggcggaa aattggtgtt tgaaatgcac
     8341 ggcgtggcag aaatcgaaca ggtgtttacc acctttttaa ccccgtttca cagcgtttat
     8401 catttaaacg gtcagcatac cgtgcctttt attgatgaaa ataacgccac agcgatcaac
     8461 tattgtgcgg tgaaactggt agaaaccaaa gagggcaaag agatcttgca cgatcacagc
     8521 gtgcgttatg ccgataccta tgttaaacaa gagggtaaat ggcggattgc caaacggatt
     8581 gcgaatttta tgatcagcga aagccgtgaa atcaggcaat aacaagcggt taaatttagc
     8641 taaaaatttg caattccatt gcatcttact aaaacagcaa aattctttgg aggaaaccga
     8701 ggaattttgc tttagtcttt aagtctgttt caattaagtg tagaataatc cgttattttt
     8761 attgatacat ttagagagaa ctatgagcga agaaatttta acggcagaaa ctggcactcg
     8821 agccaatttt attacccata ttattgatga agatttagca agcggaaagc acaacaatgt
     8881 ttacactcgt tttccacctg aaccaaacgg ttatttgcat atcggacacg ctaaatctat
     8941 ctgtttaaat tttggtatcg ctcaagatta taacggttta tgtaacttgc gttttgatga
     9001 taccaacccg gttaaagaag acgtggaata tgtagattca attaagcaag atgtggagtg
     9061 gctaggtttt aaatgggagg gtgagcctcg ttatgcctca gactattttg accagcttta
     9121 tggctatgcg attgagttaa tcaacaaagg attagcctat gttgatgaat tatcgcctga
     9181 tgaaatgcgt gaataccgtg gtactttaac cgagccgggc aaaaacagcc cttaccgtga
     9241 tcgtagcgtg gaagaaaact tagcgttatt cgaaaaaatg aaaaacggag agtttgcgga
     9301 agggaaagcc tgcttgagag caaaaattga tatggcgtcc ccgtttattg tgatgcgaga
     9361 tccggtgctt taccgtgtga aatttgctca ccatcatcaa accggtgata aatggtgcat
     9421 ctacccgatg tacgatttta cccactgcat ttccgatgcg attgagcgaa tcactcactc
     9481 gctatgtacg ctagagttcc aagataaccg ccgcttatat gattgggtgc tggacaatat
     9541 ttcgattgaa agaccgttac cgcaccaata cgaattttca cgtttaaatt tagaaggtac
     9601 tttaacctct aagcgtaaat tattaaaatt agtcacagac ggcattgttg atggttggaa
     9661 tgaccctcgt atgccaacca tttccggctt acgccgccgt ggttataccc cagcgtcttt
     9721 acgtgaattt tgtcgccgta ttggggtaac caagcaagat aacgtggtgg aatactctgc
     9781 ccttgaagcg tgcattcgtg aagacttaaa tgaaaacgca ccacgcgcga tggcggtgat
     9841 taacccggtt cgagtggtga ttgaaaactt cggtgaaaag gaaatattaa aagcccctaa
     9901 tcacccaaat cgtccagagc ttggcgagcg tgatttaccg ttcacccgtg agatttatat
     9961 tgatgaagcc gacttccgtg aagaagccaa taagcaatat aaacgtttag tcttaggcaa
    10021 agaagttcgt ttacgcaatg cctatgtgat taaagctgag cgtgtggaaa aagatgcaag
    10081 cggtcgaatt tcaactattt tttgcacata cgacccggat acattgggca aaaatccggc
    10141 tgatggtcgc aaagtaaaag gcgtgattca ttgggtatct gctgaagata acaaaccggc
    10201 agagttccgc atttacgacc gcctatttac agtaccaaac ccgggggcgg aagaagacat
    10261 caatgcggtg ctaaatcctg aatcattagt ggttaagcat ggttttgttg agtcaagttt
    10321 agctcacgcc aaaccggaac aagactacca attcgagcgt gaaggttact actgcttaga
    10381 cagcaaagat ggttcggcag acaaccttgt atttaactta actgtcagct taaaagaaag
    10441 cgtagcgttc taatctaact ctcttcattc aaataccagc aaatatgctg gtattttttt
    10501 actctcaaaa cgactcatca agcataaaaa aagccccaat tcttggggcc actcggaaag
    10561 caaatttatg tgttaggttg ctaggtacaa cacttattct tgttacctta aggttaagcg
    10621 aatttgccgg cagtttcaaa caaaatctct caaaaataca gaccaatgtt taaatttgtg
    10681 atctcagtca caaaatccac tttttccaat tgaaacgttt cattttaaat tatgaggtag
    10741 tgtattattt gagctttcta taatctttgg aaaccaaaag tgatgctctt ttatgatagc
    10801 attgtcttct cgaagaatag ataagatctg attagaaata aaatcgtaat ctaatctata
    10861 ttgaaaaaat cggtcatcat tattaaagct atttttatag caggtgtata ttttaggtgg
    10921 tatcttattt gataaacaaa atgaactata taagatttta gcagaatcaa atgaaggcac
    10981 aataatgcca tcaaaccgat gaatgctttg agccaattca aacgataatt tatgaatgga
    11041 ttccttttgg gtgaaaaaca atattttaat attatttttt tgactataac ttgccaaata
    11101 atcgcatact gttccacccc aatcacaatt attatcttta atgaaggcaa tattttctag
    11161 atgatgagct ttcatatgct ttataagatc accaattaca ggaagataat caaaaccaat
    11221 aaaatgtttt gcatttttaa ggtaacgata aacaaaaata aatttatctt ggtcttttac
    11281 ttcatcgtaa taatagtctg cattatttag gcaactatct aaaataatac gcaaatagtt
    11341 atcttgcttt atattttgaa taatttgttt ttctctatct tctcgattat gcgttaaata
    11401 aagaatgaga gataaatcat tttgcgtaca aattaaatca agattttcat ataaacaggc
    11461 atatttcagc tctgtaatat tgggcaatat aatagcaatt ttattacttg tgccactttt
    11521 taacgtagag gcttgaatat ttttacgata acccaacttt tcaacggcag cttgtacttt
    11581 ttctatttta gctaagctaa cattactttt tccgtttaat acattcgata ctgttcctaa
    11641 cgaaacattt gcttcctttg cgatatcttt catcgtaatg atcatatact gccctttcac
    11701 atactgctaa aactgagatt ggcatagatt ttaccataat tggcaaatga aatacgattt
    11761 caatttagct tgtctctagc tacaacctaa aataaaaaaa ctgcctcgat atatcgaggc
    11821 agttcttgaa taatagggat aataaattaa acaataccct gttctaacat cgcatttgcc
    11881 acttttttga aaccagcaat attcgcaccg tttacatagt ttacgaaacc atctgcttca
    11941 gtaccatttt ctacgcagtt ttcgtgaatt gctttcataa tgttgaataa acgctgatct
    12001 acttcttcac gactccaaga tagacgaatt gcattttggc tcatttctaa acctgaggtt
    12061 gccacaccac ctgcgttagc cgctttaccc ggagcataaa ggattttcgc accgataaag
    12121 acttcaacac cacctaatgt ggttggcata tttgcacctt ctgccacaca aatacagccg
    12181 tttttcacta attctttagc atcttcggta tctaattcgt tttgggttgc acaaggtaaa
    12241 gcgatgtcac atttcacacc ccacggtttt tgaccgtcaa agtattttaa gccttgttct
    12301 gttgcataca cagataagcg ttcacggcgt tcgtttttca actctaataa tgcttgtaat
    12361 tgtgcctctg tcataccgga ttcagggaat aagacataac cgttagaatc tgaaaccgtt
    12421 aatactttac cgcctttttg aatcactttt tcagctgcat attgtgccac gttacccgaa
    12481 ccggaaatta ccactgattt tccttcgatc tgctgacctt tagtcgctaa catagactct
    12541 gcaaaataca ccgcaccata accagttgct tccggacgaa ttaagctacc accccaagtc
    12601 agcgatttac cggttaatac tgaagtaaat tcattgcgta attttttgta ttgaccgaac
    12661 atatagccga tttcacgacc tcccacgccg atatcgcctg caggaacgtc agtatcagca
    12721 ccaatgtggc gatataattc gctcataaac gcttggcaga aacgcattac ttcggcatca
    12781 gatttgcctt tcgggtcaaa gtctgaacca cctttaccac cgcccattgg caatgtcgtt
    12841 aacgcatttt tgaatacttg ctcaaaggct aagaatttta atacgcctaa atcaacggtt
    12901 gggtggaaac gaataccgcc tttgtatgga ccgattgctg agttcatttg tacacggtaa
    12961 ccacggttta cttgcacttg acctttatca tcaacccaag tgacacggaa gctaattaca
    13021 cgctcaggct caacaatacg ccctaataaa ccttgctggg tatatttcgg atttttagct
    13081 aagaaagggg caaggctacc gaacacttct tcaaccgctt gatggaaagg ggcttggttc
    13141 ggatcacgtt gtttgatttt ttggaaaagg gcgtttaaat cgctcatatt atactcctga
    13201 ataaattgat gatgttgtgt atttaagatg agcgaagtct agcaagcaat tttagctttg
    13261 aaaagataga ttagaaaaat ttatcattaa aataagaaaa attaagttta aatgcttatt
    13321 ttttattcaa aaaaataagc ccacttttaa aagtgggctt ttcgaaccaa caaatcgtcc
    13381 tatttttgtt ctgcattcgc attgctgtca tcaatttttg atactaaccc tttagcatca
    13441 aaataaataa acagattgcg ttgttcagga tctttataac cttcacgttt aataaacaca
    13501 taatcccaac ggtgggtttc aaaaatgttc tttaacattg gtgtaccaag caaatattca
    13561 acttgttccg ctgtcatacc gactttaagt tgagcaattt tatcttgttc taagtaattg
    13621 ccttgcggta catcaatacg gtacaccact ttctcaacgg ttgaacaagc cgttacaccc
    13681 agtgcaagca acattgcagc taaaagagat ttcattttca taattgacct tttgataatc
    13741 caaaattcag ataacgagat aatacctaaa ctgataaaaa ttttccatta tttgttacgt
    13801 tccagctggt cacgcagatt tgccggtaat cctttgattg tcagtgtgtc gtttagttca
    13861 tcccaaagta aacgctctcc taataattct gcgttaaagc taatcgttac tcctttgccc
    13921 gaaccggaaa atttcgtcag ggttttaagg gcatttcgca taggcggaat attctcttcc
    13981 aagccgtatt cttgctcttg cgtaaattgg gcaaaatcga tttcattcag tgttggcaat
    14041 gcgttggaaa gctcatttaa cgcaatttcc tctccactat ttatctgccc tttacaatat
    14101 tcaaacacct gctttttcac ttctcgagtt tgaggggcag ataactcccc ttgctcacaa
    14161 taatcgctca ccgcttgcaa caaggtttga ttttgcaatt gtggattaaa cccttcttcc
    14221 gcacttaaaa aatccataaa gaaatcggca attttacgcc ctactctgcc tttcacaaaa
    14281 gttaaatagc gatttgacgt tgcgtcaagt ttcagttcag ttaaattaat gcggcaggca
    14341 atatcatatt gtgcaatttc gagatattgc gtgcgtttaa tctctaactg ctcatcaacc
    14401 agcattgaat tacggctatc aatcaacgca ataaacaaat attcggtagc taaaaaagtg
    14461 taacgacaca aaataaaagt gccaccatcg gcaaacggat atttaatcag ctctgctgca
    14521 agcattttgg cacagctatg gctaaaaggt aaaaaatcgg tttcttgctc caacaagcgg
    14581 ttgagctgtt gagcgaaaac cgactccggt ttaaatatac cgtaagcctt tgctttactt
    14641 tgataggctt gatgtaattg caacatcatt tgatcgactt caggggaaat tgccaataaa
    14701 ttttctcgca aaaacgtatt aagctccggg ttctcgccct ctgttttttg taattgatgt
    14761 aacacgattt cagaaacatt aatgctcatt aattcacttc tctttattcc aaataataag
    14821 aaaagatatt atcattaatc cgtttatttt tcattaagag gaacacaaga tgacagttat
    14881 ccacacagaa aatgcaccgg cagcgattgg gccttatgtg caagcagttg atttaggcaa
    14941 tatggtttta acttctgggc aaattcccgt gaatcctgaa accggcgaaa tcccgagtga
    15001 tattgtgcaa caaacccgcc aatctctgaa caacgtgaaa gccattatcg aacaagccgg
    15061 cttaaccgtt gccgatattg taaagaccac cgtatttgtc aaagatctta acgacttcgc
    15121 aaaggtaaat gcggaatacc aagccttctt ccaagaaaac gaacacccta attttccggc
    15181 tcgttcttgc gtagaagtgg ctcgtttacc aaaagatgtt ggcattgaga tcgaagcgat
    15241 tgcagtacgc cgataacaag cggtcatttt cttgagattt tttgcaaatg gataaaatta
    15301 ttccaaattg gaatgtgcct aaacatattc acgcactgac gaccttaaga acaggcggag
    15361 taagcaaacc gccttttgac agtttcaact taggtgatca cgttaatgac gagccacaag
    15421 atatcgctca aaatcgtgct ttattggttg agaaatttca attaccacaa gctccgctgt
    15481 ttttaaccca aactcacagc acccgagtga ttgaacttcc ctattcaggt gataatatta
    15541 aagccgatgc gatttacacc aatcaaccaa accaagtctg cttagtgatg actgcagatt
    15601 gtttgccggt attatttgcc agccaagacg ggtcggaaat tgcggcggca cacgccggct
    15661 ggcgtgggtt atgcgatggc atattagagg cgacggtaga gaaattcaac tgcccgccac
    15721 acgaaatatc agcttggcta gggccggcta tcggaccgaa tgcttttcaa gtcgggagtg
    15781 aagtggcaga ccaattctgt gcttttgacc caagagcgaa agaagccctt attgaagaca
    15841 gcactacaag cggtaaattt ttaggaaatc tttaccaaat tgccacccaa cgtctgaata
    15901 aattaggcat taccgccatt tcaggcggtg aatattgcac ctacagccaa ccagaactgt
    15961 ttttttccta ccgccgagac aaacaaaccg ggcgaatggc aaccttaatt tggcgaacag
    16021 aataacccta ttttctctcg ttcaataatt aaccgagtaa tcttctgcct ctagacgact
    16081 actcggtttt tctctataat tccaaccact tttcaaatcc ccccatagct cagtggttag
    16141 agcaggcgac tcataatcgc ttggtcgctg gttcaagtcc ggctgggggg accatctaag
    16201 cgttgcatat tgtctttcat tgtctcaaat ttactataaa atcaagaact tagattcttt
    16261 tatagtctct tattgtcttc tttagttgca ttgtatctta gtgtttatga tccctaaaat
    16321 gatccctatt ttgaaaacgg gaaaatttag ggatcataaa cttcgataaa cccttatata
    16381 tcaaggatta gaagaaatga ctgcaactaa aaaaccactt tcagacacat tactaaaaaa
    16441 tctcaaatat tccccaaatg cgaagcctat cgcagacagc aacgggctat ttattcttgc
    16501 acagaaaaaa gcgaaagtat ggatttatag ctatatcagc cccaaaacag gcaagcgaag
    16561 cacaaaaaat agaatcggta gctatccgca aatgagctta gccgaagcac gcttaaagag
    16621 agacgaacta aatacccttg ttttacaagg cttagaccct ttcgagcatt tagccaaaat
    16681 gcaaagagaa gctaaggaaa agcaagaatc tattcaatct ttcgcctata aatgggctga
    16741 ttggaagcta tcaaagggaa aatgcaagcc taaaacaatg gaaaaatgct tacagcggtt
    16801 agaaaatcat ttattcccac gttttgaagg ctatacgctg gaagatttta ccttaaccga
    16861 tacaatcaac cgcttaacgg acttagatcg gataatgccc gacactttgc acagaatagc
    16921 agggaattta atagaaattc ttgattatgc ggtattgtgt gggagaatta attttaaccc
    16981 aatcagcgtc attaaaaagg cgttttccag cgtaagcacg acacaccagc cagcaataat
    17041 gcccgaagag ttagccgaat ttatgcaaga cttgcagaaa tcaaatagaa cgcctcaaat
    17101 taaattatta gttgaatggc aactcttgaa tattcttaga ccgtttgaag ccgtagcggt
    17161 gcaatggagc gatatagatt gggaaactaa gacgctcaac attccggcag atagaatgaa
    17221 aggcggaaaa aatccgcatt ctgtaccgct aacaaaacaa gctatcgcaa tcctagagga
    17281 aatgaagaaa tataacggac accataaaca tatttttaca caccgaacag accgaaacaa
    17341 accggctaat agccaaaccg tgaataatgc aataaaacgc ttaagcggtg gaaaatataa
    17401 agggctttta gtggctcacg gtttaagaag cattgccagc acctatttac acgaacgttt
    17461 tactactgaa acgctagtaa ttgaggcttg tttatcccac acgaacaaag acaccgtaat
    17521 gagtgcatac caccgtaaaa actggctaga ccgcagacgt ggaataatgc aggaatgggc
    17581 ggattttgta gaacaatgca agagcattta aatgacaaag gcggagcaat ccgcctttct
    17641 ttttgcttga tgaaaaattt tcattttttc ctatcagctc ccagcccgtg ccgtctatcc
    17701 cacgcctcgc ccgcacactt aaagtctcga tttctacgca aatgcaaaat taagcccaaa
    17761 cattgccccg tatagcgtga aaaactttca tatagccgtt ttttattacg caattttacg
    17821 caagaaaacg caaatttacg caggcagaaa caccactttt aaaaactcga tgacagaacg
    17881 atgaaagaac cgctgaaaac ttgcaaaaaa tcagagaaaa ataaccgctt gcaagttttc
    17941 caaatcagaa ttaagcccct ctaatctgta aaatctcctt tcacagccct aacaaatagc
    18001 aaaaaatcca agatgattta ttctttcaca cgttagcagg caatagcacg ccaaagcaaa
    18061 tttttacgga gtaaaacaaa atggagaaca caccagcaaa acagcgattt atgaaaatag
    18121 atgaagtttc agccgtaact acgctttcag aaacgcagat ttatcgcaaa atgaaagccg
    18181 gcgattttcc ccaaagtatc agtattgggg caaatagcaa agtatggcta gaaagtgaaa
    18241 tccagcaatg gattcaacgc aaaattgaac aacaccgcaa ccaataaggg caaattatga
    18301 cacttgaaac atttaaccaa caaaaagcta aattccacga acaagaaaaa gccgttttag
    18361 ctattcagac cgaattagac aaagcgaaaa atattcttga ggcattgcaa aacgaaaaag
    18421 cggaatttgt cgcacggcaa aaaacgaatt tagccaatat cggcacgctt tcagcagatg
    18481 aatatgttga aatcaaaaat aaaaatagtg gtttacaagc acgcatagaa tattatcaag
    18541 cgttgattgt tgatttagaa aataaatgct acgcagagca agaaatatta ttccaacagc
    18601 agaatgaact aaaacaaatc ag
//
LOCUS       DANLXO010000048        18495 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.048, whole genome shotgun sequence.
ACCESSION   DANLXO010000048 DANLXO010000000
VERSION     DANLXO010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18495
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.048"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            25..957
                     /locus_tag="PXD69_001379"
     CDS             25..957
                     /locus_tag="PXD69_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6283580.1"
                     /translation="MDSLIHFLSAFLTNITWIGALELGLIYSLVALGVLISYKILDFP
                     DLTADGSFPLGGAVCVISILNQVDPWLATLYGTLAGAVAGMVTASLHIGFKIEKLLAS
                     ILMMIALYSINLRIMGMPNIAILGETTIYDVMPIESDLQLALVRLVMALLVVIIVKGL
                     FDLFFATEIGLAVRATGTNSRMAKAQGIAINKMTILGMAISNALIALGGALYVQSNGG
                     VDISIGVGTIVIGLAAVIIGEAIFSVKRIIWLTFAVIIGSILYRFFIALALNNETLNG
                     IGFGPQDLNLITALLVVIVLAVPRIKHKLLGKRG"
     gene            959..1756
                     /locus_tag="PXD69_001380"
     CDS             959..1756
                     /locus_tag="PXD69_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283581.1"
                     /translation="MIELNNLFITFNKGTAIENPVLRGLSLKVEQGEFVSVIGSNGAG
                     KSTLLNAISGDCAVDSGEILIQGNKVNQSTTWQRANQVARVFQDPMAGTCESLTIEEN
                     MALAYQRGRKRGLGFAIKRQMRELFKDKLALLGLGLENRLTDQMGRLSGGQRQAVSLL
                     MASLQPSNILLLDEHTAALDPKTTDFVLELTNKIVREQKLTTLMVTHSMRQALDYGDR
                     TVMLHQGQVAFDVSGEQRQKMDVPDLLQLFQQSRHEQLSDDGLLLGN"
     gene            1843..2064
                     /locus_tag="PXD69_001381"
     CDS             1843..2064
                     /locus_tag="PXD69_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283582.1"
                     /translation="MLSIFKTPVEKETLDDWAKISVDVAKVAILAIPVILFGKEPTLI
                     KLTNLALLVLSIYVFLTLGRKLRQLKEVL"
     gene            2247..4172
                     /locus_tag="PXD69_001382"
     CDS             2247..4172
                     /locus_tag="PXD69_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HDL6283583.1"
                     /translation="MTKYDDKIQHAFSENGLLSQNISGFRPRQAQLEMAQVVAKAVKF
                     ATPVVVEAGTGTGKTFAYLVPALLSGKKTILSTGSKNLQDQLFNRDLPTIQKALKYKG
                     KIALLKGRANYLCLERLDQVTAMGVLGDKSVLTDLKKVSKWQNATKTGDLSECITIAE
                     DSPILPQLVSTTESCLGSDCPHFKDCYVVQARRKAMEADVVVVNHHLFCADMAVKKTG
                     FGELIPEAELVIFDEAHQLPDIASQYFGQSLSSRQLFDICKDTNIVYRTELKDLSQLG
                     KAADHLTKVVQDFRLLMGGEGQIRGNLRELFRDKKVVDGLVKVAENIDFLSEVAKKSL
                     GRSETLDKIFERLAEVKVQLKKLMDTSVTGYCYWYEANGRSFGLHITPLMVADKFGEQ
                     LKNQQIGWVFTSATLEVGGKFDHFCQRLGIENAEQLVLQSPFDYQHQSLLCVPRYLPD
                     TNKSNTLTALGQLLKPVIEANKGRCFLLCTSYYMMRGLADFLREHSSLNVLLQGETSK
                     SRLLEKFVKEDHSVLVATQSFWEGIDVRGDDLSLVIIDKLPFTSPDEPLLKARMEDCK
                     IQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDSRLVMRNYGQTFLKSLPP
                     SRRTRDLGNVIQFLKQK"
     gene            4246..4611
                     /locus_tag="PXD69_001383"
     CDS             4246..4611
                     /locus_tag="PXD69_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HDL6283584.1"
                     /translation="MLSTLLRMVASLALLFVMLYLGKLIVYLFPIGIPDSILGMLILF
                     GCLVIGIVKVEWVIPSAKPLTRYITLFFLPICVELIEHLELLRQNLNTFVLATALSTL
                     VSVVAIGVFAQWIFHYKRG"
     gene            4613..5299
                     /locus_tag="PXD69_001384"
     CDS             4613..5299
                     /locus_tag="PXD69_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDL6283585.1"
                     /translation="MSYLYTVLTVIMFIAGLKISQKLKSSFLNPFLIALALLIGVLLI
                     FNIPYQDYYQGNSPLNNLLGVSVVALAYPFYEQLPHIRKKWRQIVVILLFSTIITMIT
                     GLGFSLLFGASQEILAAILPKSVSMPMAIIITNEINGNVAIAAVGVMIAGLVGSILGF
                     TLLRLAKVRNVMVIGLSMGAASHALGTARCLEHSMKAGSYSSIALVACGVLSSIFAPL
                     IFNVIVTLCY"
     gene            5383..7146
                     /gene="msbA"
                     /locus_tag="PXD69_001385"
     CDS             5383..7146
                     /gene="msbA"
                     /locus_tag="PXD69_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HDL6283586.1"
                     /translation="MQEQITQEKDLSTLKTFKRLWPTISPFKAGLITGAVALVLNALV
                     DSSLIYLLKPLLDEGFGQANNDFLKLMAVLVVVFILVRGITNYIASYCLAWVSGKVVM
                     TLRRHIFQHLMYMPVSYFDNNPTGRLLSRVTYDTEMVASSASHSLVTIVREGAYLLSL
                     FVVMIYTSWQLSIVLFVMAPIIGVLISFVSKYFRQLSRNIQSSMGELTVTTEQMLKGH
                     KVVLSFGGQEIEKARFDRVSNDMRRKGMKVVSADGISDGVVQLIASFALSAVLYVATF
                     PEVMSENLTAGSFTVVFSSMMAMLRPLKSLTNVNSQFQRGMAACQTLFEFLDLKTEKD
                     HGLISVAKAEGNVEFKKVSFSYEGKEEKALDNISFTIPKGKTVALVGRSGSGKSTIAN
                     LLTRFYDVTDGQILLDGINIQDYRLKNLREQCSVVSQQVHLFNDTIANNIAYAAIDKY
                     SREEIIAAAKAAHAMEFIEKLENGLDTVIGENGASLSGGQRQRLAIARALLRNSPVLV
                     LDEATSALDTESERAIQSALEVLQKDRTVLVIAHRLSTIEKADEILVVDHGNIIERGS
                     HTELLAQGGAYKQLHSLQFGA"
     gene            7235..7867
                     /gene="lolB"
                     /locus_tag="PXD69_001386"
     CDS             7235..7867
                     /gene="lolB"
                     /locus_tag="PXD69_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HDL6283587.1"
                     /translation="MKKLTKLLSLSALLVLTACNSVLNASTEVQQPTVQIPHDDPQWQ
                     QHLAKLSQIQGYTATGQFGYISPEERFSSHFNWRYTNPIQFGLELSSNLSTKSLKLER
                     NKRGLTVSDNEGNSRSDRDVDALMQEIIGVSFPIDQFAYWVKGLPEKDGNYIVNEKRQ
                     LSQFSYPLNGTLWKASYVEYHEDRVPNLPKLIVLENGTQTLKIRIEKWAY"
     gene            7855..8709
                     /gene="ispE"
                     /locus_tag="PXD69_001387"
     CDS             7855..8709
                     /gene="ispE"
                     /locus_tag="PXD69_001387"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDL6283588.1"
                     /translation="MGVLMKKVTLPSPAKLNLFLYITNKRADGYHELQTLFQFLDFGD
                     EIEIEITESSEVELINPVEGVATEENLIYRAAKLLQKTTACRQGCRIGIKKNLPMGGG
                     VGGGSSNAATVLVGLNHLWNTELSLEKLAELGLSLGADVPIFVRGMAAFAEGVGEVLT
                     PCDPQEKWYVVLKPEVSISTAAVFTDPNLPRNTPKRPLAELLSLPWENDCEKVVREKY
                     SAVEDLIQELLQYAQFRLTGTGACIFAEFETKAEAEQVFAHKPEAVFGFVAKGQNISP
                     LHQMLFQI"
     gene            8735..9685
                     /locus_tag="PXD69_001388"
     CDS             8735..9685
                     /locus_tag="PXD69_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDL6283589.1"
                     /translation="MTDIKLFAGNATPELANRIAKHLYTSLGNATVGRFSDGEIQVQI
                     NENVRGGDIFIVQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVIADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLIDDILKKS
                     DLVNPIVVSPDIGGVVRARAVAKLLNDTDMAIIDKRRPKANVSQVMHIIGDVADRDCI
                     LVDDMIDTGGTLVKAAEALKERGARRVFAYATHAVFSGTAAQNLANPALDEIVVTDTI
                     PLSNEIKALNKVRVLTLSGMLAEAIRRISNEESISAMFDA"
     gene            9763..10773
                     /gene="pyrD"
                     /locus_tag="PXD69_001389"
     CDS             9763..10773
                     /gene="pyrD"
                     /locus_tag="PXD69_001389"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDL6283590.1"
                     /translation="MYSLIRKLLFALDTEKAHQFSIQALALAGKSPFSILPTPDNPTQ
                     VMGLTFKNPIGLAAGADKNGEAIDGFGKLGFGFIEVGTITPLAQDGNPKPRQFRIVDA
                     EGIINRNGFNNKGVDVLVENVKNATYSGILGINIGKNAVTPIEHSFDDYQICLRKVYQ
                     YADYVAVNISSPNTKNLRSLQYGEALDDLLRNLKNEQAQLSQKMGKYRPLVLKIAPDL
                     TDEEIVSVADSLIRYQIDGVIAGNTTLSRESIAGLPYSEQLGGLSGKPLHSLSTRLIS
                     KLSAELGERIPIIGCGGVHSLESGQEKVNAGASLLQVYSAMIYQGPSLIQTLAKHLQL
                     NS"
     gene            11137..13794
                     /gene="aceE"
                     /locus_tag="PXD69_001390"
     CDS             11137..13794
                     /gene="aceE"
                     /locus_tag="PXD69_001390"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDL6283591.1"
                     /translation="MSENLRNDVDPIETQDWLASLDSLIREEGLERAQFIIEQVISQA
                     RAGGVALPTGVTTDYVNTIPVSEQPAYPGDHKIERRIRSAVRWNAIAAVLRSQKKDLD
                     LGGHISTFQSAATMYEVCFNHFFKAPTEKDGGDLVFFQGHAAPGMYGRAFLEGRITAE
                     QMDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKD
                     TSAQKVYAFLGDGEMDEIESKGALSFAGREKLNNLIFTISCNLQRLDGPVNGNGKIVQ
                     ELEALFTGCGWEVIKVLWGSGWDKLLEKDTSGKLKQLMMEVLDGDYLTFKSKNGAYVR
                     EHFFGRYPETAALVADMTDDEIWALRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKG
                     YRIPEAESKNTAHQSKKMSLDSLKGFRDYFELPLTDEQVESLEYVRFPEGSEEYNYLH
                     GQRKALNGYVPVRKPKFTVDFKVPELSEFQALLDEQPRGISTTMAFSRVLNTLLKDKN
                     IGQQIVPIIADEARTFGMEGLFRQIGIYNPHGQNYVPSDRDLVAYYREAKDGQVLQEG
                     INELGATASWVAAATSYSVSNLPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMIGG
                     TSGRTTLNGEGLQHEDGHSHIQAGVIPNCVTYDPAFAFEVAVIVQDGIRRMYGENQED
                     IFYYITTLNEITEQPAMPAGAEEGIRKGLYKFETVEGKGKGHVQLLSSGAIMRHVRAA
                     AQILANDYGITADVFSAPSFNELGRDGADVARWNLLHPTETPRVPYVAQVLQDLPTVA
                     STDYMKMYAEQIRAYVPSKHYHVLGTDGFGRSDSRANLREHFEVDERYVVVAALAQLA
                     KEGTVENKVVAEAITKFGLNVDRINPLYA"
     gene            13998..15908
                     /gene="aceF"
                     /locus_tag="PXD69_001391"
     CDS             13998..15908
                     /gene="aceF"
                     /locus_tag="PXD69_001391"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HDL6283592.1"
                     /translation="MSKQINVPDIGSDEVSVTEVMVKVGDTISVDQSIINVEGDKASM
                     EVPAPEAGVVKEVLVKVGDKVSTGSPMLILESADAAPAQEAPKAEAAPAAPVATTSAV
                     VEVNVPDIGGDEVNVTEIMVKVGDSVEVDQSIINVEGDKASMEVPAPVAGVVKEILIN
                     VGDKVSTGKLIMKFETASAATAQSTPVAEAAPAQASASAIKDVNVPDIGGDEVNVTEI
                     MVKVGDSVSEEQSLITVEGDKASMEVPAPFAGVVKEILVKSGDKVSTGSLIMKFEVAG
                     AAPAPAAAQAASAPAPAPQAAAPAKADAAPAGQNQSGLSQEQVVASAGYAHATPVIRR
                     LAREFGVNLDKVKGTGRKGRIVKEDIQAYVKTAVQVFEKQGGTAAAATGAANGAGLGL
                     LPWPKVDFSKFGEVEEVELSRINKISGANLHRNWVMIPHVTHFDRTDITELENFRKEQ
                     NKEAEKRKLDVKITPVVFIMKAVASALEAFPRFNSSISEDAQRLTLKKYINIGVAVDT
                     PNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLGGIGTTH
                     FTPIVNAPEVAILGVSKSEMQPIWNGKEFEPRLMLPLSLSFDHRVIDGADGARFLSYI
                     NSVLADIRRLVM"
     gene            16108..17532
                     /gene="lpdA"
                     /locus_tag="PXD69_001392"
     CDS             16108..17532
                     /gene="lpdA"
                     /locus_tag="PXD69_001392"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDL6283593.1"
                     /translation="MSKEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGI
                     CLNVGCIPSKALLHVAKVIEEAKNAVHNGVTFGEPTIDLDQVRAGKEAVVSKLTGGLA
                     GMAKARKVTVVEGLAAFTGPNTLVARDRDGNPTTITFDNAIIAAGSRPIQLPFIPHED
                     PRVWDSTDALKLKEVPKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKD
                     VVAIYTKQIEKKFKLMLETKVTAVEAKDDGIYVSMEGKACNDTKRYDAVLVAIGRVPN
                     GKLIDAGKAGVEVDERGFIRVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGMKHYFDPKVIPSIAYTEPEVAWVGKTEKECKQEGLNYEVAKFPWAASGRAIASEC
                     SEGMTKLIFDKDTHRVLGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNAKAKKR"
     gene            17742..17817
                     /locus_tag="PXD69_001393"
     tRNA            17742..17817
                     /locus_tag="PXD69_001393"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17775..17777,aa:Gly,seq:gcc)
     gene            17833..17906
                     /locus_tag="PXD69_001394"
     tRNA            17833..17906
                     /locus_tag="PXD69_001394"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17865..17867,aa:Cys,seq:gca)
     gene            complement(17910..18428)
                     /locus_tag="PXD69_001395"
     CDS             complement(17910..18428)
                     /locus_tag="PXD69_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein"
                     /protein_id="HDL6283594.1"
                     /translation="MQKKLFIAQIKQNLSELNVFSTDNIFLNSPYFSQQTGLVSVFIA
                     EIEKTVELLLNQTEVLYSEFYAEKLVKQVDALKNAVEKIQSKPESAQFHSSYQFSPNI
                     HRLAPNKRLQEYRKALRALNEKISWLVEQNLNTQNEATKQTLQNQITETEYRKMKCLK
                     AIEDLEQELLFK"
BASE COUNT         5442 a         3370 c         4205 g         5478 t
ORIGIN      
        1 gatttcatta actataataa acaaatggac agtcttattc attttttgag tgccttttta
       61 actaatatca cttggattgg ggcgttagag ctggggttaa tttattccct tgttgccctt
      121 ggggtattaa tttcttataa aattctggat tttccggatc tgaccgcaga cggcagtttc
      181 cctttaggag gggcggtgtg tgtgatcagc attttgaatc aagttgatcc ttggctggca
      241 actttatacg gcacgcttgc cggagcagta gccggtatgg ttactgcaag tttgcatatc
      301 ggctttaaaa tcgaaaaatt gcttgccagt attttaatga tgatcgcact ctattcgatt
      361 aatctacgca ttatgggaat gccgaatatt gctattttag gcgaaaccac gatttacgat
      421 gtaatgccga ttgaaagcga tctacagtta gccttagtac gattagtgat ggcattgctg
      481 gttgttatta tcgtaaaagg tttgtttgac ctcttttttg cgaccgaaat cggtttggct
      541 gtgcgggcaa ccggtactaa tagtcgaatg gcgaaagcac agggtattgc gattaataaa
      601 atgacgattt tagggatggc gatttctaat gcgttaattg ccttaggtgg tgctttgtat
      661 gtgcaaagca acggtggtgt agatatttcg attggggtag gaactatcgt gattggcttg
      721 gcggcggtaa ttatcgggga agcaattttt tcggtaaaac ggattatttg gcttaccttt
      781 gcggtgatta ttggctcaat tctttatcgt ttcttcatcg cactagcatt aaataacgaa
      841 actttaaacg gcattggctt tggcccgcaa gatctgaatt taattacggc gttattggtg
      901 gtgattgtat tagcggttcc tcgaattaaa cacaaattgc tcggtaagcg aggttaatat
      961 gattgaactc aataacttat ttattacctt caacaaaggg acagcaattg agaaccctgt
     1021 gctgagaggc ttatccctaa aagttgagca aggcgaattt gtgtcggtaa ttggtagcaa
     1081 tggggcgggt aaatctacct tattaaatgc gatcagtggt gattgtgcgg tggactccgg
     1141 tgagatttta attcaaggaa ataaggtaaa ccaatccacc acttggcaac gggcaaatca
     1201 agtcgcccga gttttccaag acccgatggc tggcacttgt gaaagtttaa cgattgaaga
     1261 aaatatggca ctggcttacc aacgtggacg taaacgtggg ttgggctttg cgatcaaacg
     1321 ccaaatgcga gagttattca aagacaaact tgctttgtta gggctaggtt tggaaaatcg
     1381 gcttactgat caaatggggc gtttatcagg cgggcaacgc caagcggtga gcttgctgat
     1441 ggcatcactt cagccgtcta atatcttatt gttagatgaa cacaccgcgg cactggatcc
     1501 gaaaaccacc gattttgtgc ttgaacttac caataaaatt gtaagagaac agaaattaac
     1561 cacgctaatg gtaacgcatt caatgcggca agcccttgac tatggcgata gaaccgtgat
     1621 gttacaccaa gggcaagtgg cgtttgatgt ttcgggcgag caacggcaaa aaatggacgt
     1681 gccggatctg ttacaacttt tccaacaaag tcgccacgag cagttgagtg acgatggatt
     1741 attactcggc aattaatttt gcgatctgca tcgaaaaaat gaatttctcc ttttgttttt
     1801 ggctgtcaaa ttttaaataa taagcccaaa aggaggtatt caatgttaag cattttcaaa
     1861 acaccggtag agaaagaaac gctagacgat tgggctaaaa tttcggttga tgtagcgaaa
     1921 gttgcgattt tggcaattcc tgttatactt tttggcaaag aaccaacgtt gattaaattg
     1981 actaacttag cattattggt attgagtatt tatgtttttt tgacgcttgg gcgaaaatta
     2041 cggcagctaa aggaggtgtt gtgatggaac taggctggaa tttaaccata ggtttgctaa
     2101 ttttaaacgt ctttgcgttt gcttggcttt atattattaa ccggatttct aaagaacaat
     2161 tatccaaaaa tcaataatat ttaatttttc acaagcggtt gtttttgcaa aatattttgt
     2221 aaattcgacc gcttgcctgt ttttaaatga caaaatacga cgataaaatt cagcatgcat
     2281 ttagcgaaaa tgggttgctc agccaaaata tcagtggatt tcgaccacgc caagcacagc
     2341 ttgaaatggc tcaagtggtc gcaaaagcag taaaatttgc gacacctgtt gtggtagagg
     2401 cgggaaccgg cacaggcaaa acctttgctt atcttgtgcc ggcactactt tcaggcaaga
     2461 aaactattct ttcgacaggt tctaaaaacc tgcaagatca actttttaat cgagatcttc
     2521 ccactattca aaaagccctg aaatacaaag gcaaaattgc gttactcaaa gggcgtgcga
     2581 actatttgtg tttagagcgt ttagatcaag tgaccgcaat gggcgtactt ggggataaat
     2641 ccgttcttac cgatttaaaa aaagtcagta aatggcaaaa tgccactaaa acaggggatt
     2701 taagtgaatg tattaccatt gccgaagata gcccgattct accgcagtta gttagcacca
     2761 ccgagagttg cttaggctcg gactgcccgc attttaaaga ttgttatgtg gtacaagccc
     2821 gccgtaaagc gatggaggca gacgtagtgg tggtaaacca tcacctattc tgtgctgata
     2881 tggcagtaaa aaagaccggt tttggtgagt tgatccctga agctgagctg gtgatctttg
     2941 atgaagctca ccaactgccg gatattgcca gccaatattt tgggcaatcg ctttcttccc
     3001 gccagttatt tgatatttgt aaggatacca atattgttta ccgcactgaa ctcaaagatc
     3061 tgtctcaatt aggcaaagcg gctgatcact tgacgaaagt agtgcaagat ttccgattat
     3121 tgatgggcgg agaagggcag attcgaggca atttgcgaga gttatttcgt gataaaaaag
     3181 tggtcgatgg cttggtaaaa gtggctgaaa atattgattt tttaagtgaa gtggcgaaaa
     3241 aatcgctggg gcggtcggaa acgttggata aaattttcga gcggttagca gaagttaagg
     3301 ttcaacttaa aaaattaatg gatactagtg tgacaggcta ttgttactgg tatgaggcga
     3361 atggacgatc ctttgggctg catattacgc cgcttatggt ggcagataaa tttggtgaac
     3421 agttgaagaa ccagcaaatt ggttgggtgt ttacctcagc cacactcgaa gttgggggca
     3481 aattcgatca tttttgtcaa cggctgggca tcgaaaatgc ggagcagttg gtgttacaaa
     3541 gtccgtttga ttaccaacat caatctttac tctgtgtgcc ccgctacttg ccggatacca
     3601 ataaatccaa tactttaact gctctcgggc aattattaaa accggtgatt gaggcgaata
     3661 aagggcgttg tttcttgctt tgtacttcct attatatgat gcgaggttta gccgactttt
     3721 tacgcgaaca cagttcgctg aatgtgttat tgcaaggcga aaccagcaaa agccgtttat
     3781 tggaaaaatt tgtgaaagaa gatcacagcg tgttggtggc gacccaaagt ttttgggagg
     3841 ggattgatgt gcgaggcgat gatttatcgt tggtgattat tgataaattg ccgttcactt
     3901 caccggacga accattactc aaagcccgaa tggaagattg taagatacag ggcggtgatc
     3961 cgtttaacga tattcaaatt cccgaagcgg tgattaccct caaacaaggt gtagggcgtt
     4021 taattcgtga tgtgaccgat agaggtgtag tgattatttg tgattcccgt ttggtgatgc
     4081 gaaattatgg gcaaactttc ttgaaaagtt taccgccgtc tagacgcact agagatttgg
     4141 ggaatgttat tcaatttttg aaacaaaaat agggttacaa gcggtcagat ttctgcagat
     4201 ttttgcaaaa aaacggataa aaataaccgc ttgttgagga gttatatgtt gtctacattg
     4261 ctgcgtatgg ttgcttcttt ggcattgtta tttgtgatgc tttatttagg caagttaatc
     4321 gtttatctat tccccatcgg gatcccggat agtattttag gtatgcttat cttattcggc
     4381 tgcttggtta tcggcattgt taaagtggaa tgggtgatac cgagcgcgaa accgctcaca
     4441 cgttatataa cactattttt ccttccgatt tgtgtcgaac tcatcgaaca tcttgagctg
     4501 ttacgccaaa atctgaacac ttttgtatta gcaacggcat taagcacctt agtttctgtg
     4561 gtcgcgattg gcgtgtttgc acagtggatt tttcattaca agagagggta aaatgagcta
     4621 tctttacact gtgttgacgg taatcatgtt tattgccggt ttgaaaatca gccaaaaact
     4681 caagagcagt tttctgaacc ctttcttaat tgcactcgct ttgctaattg gtgtattact
     4741 gatttttaat atcccttacc aagactatta tcaaggtaat tcccccttga ataacttact
     4801 tggcgtttct gttgtggcac ttgcttaccc tttttatgaa caattacccc atatccgtaa
     4861 aaaatggcga cagattgtcg tgattttgct gtttagtacc atcattacga tgataaccgg
     4921 gcttgggttt tcattattat ttggggcaag ccaagagatc ttagccgcca ttttgcctaa
     4981 atcggtatca atgccaatgg caattattat tacgaatgaa attaatggaa atgttgcaat
     5041 cgcagcggtt ggggtgatga tcgcaggctt agtgggatct attttaggct ttacgcttct
     5101 gcgcctggca aaagtaagaa atgtgatggt gattgggtta agtatgggag ctgcttccca
     5161 cgcattaggc acggcaagat gcttagagca tagtatgaaa gccggtagct atagttctat
     5221 cgcattagtg gcttgtggtg tgctgtcttc tatatttgca cctttaatat ttaacgttat
     5281 cgtcacgtta tgttactaaa aacagtgaaa tctcaaacct tatttggtaa ctggctgaaa
     5341 tcaaggtaca ataccgtgat ttttcaatga aaatagagaa ttatgcaaga acaaataaca
     5401 caagaaaaag atctttctac gcttaaaacc tttaagcgtt tatggccgac tatcagcccg
     5461 tttaaagcgg gtctgattac aggtgctgtc gctttagtat taaatgcgtt agtggattct
     5521 agtcttatct atctcctcaa acccttgcta gatgaaggct ttgggcaagc taataatgat
     5581 tttctgaaat tgatggcggt gcttgtagta gtttttattt tagtgcgcgg tattaccaat
     5641 tatattgcca gttactgttt agcttgggtg tcaggcaagg tggtaatgac attacgccgc
     5701 catatttttc aacatttaat gtatatgccg gtaagctatt ttgataacaa cccgaccggg
     5761 cgtttgctct cacgagtgac ttacgatacc gaaatggtgg cgagttctgc ttctcattct
     5821 ttagtgacta ttgtgcgtga aggggcttat ctgctgtcat tgtttgtggt gatgatctat
     5881 accagttggc agctttctat tgtgttattt gtgatggctc ctatcattgg ggtactgatc
     5941 agtttcgttt caaaatattt tcgtcaatta agtcgcaata tccaaagttc aatgggggag
     6001 cttactgtca cgacagaaca aatgcttaaa gggcataagg ttgtactttc ctttggtggg
     6061 caggaaattg agaaagcacg ttttgatcga gtcagtaatg atatgcgtcg taaagggatg
     6121 aaagtcgttt ctgctgatgg catttctgat ggtgtggtac agcttatcgc ctcttttgcg
     6181 ttatctgctg tgctttatgt tgcgaccttc cccgaggtga tgagtgagaa tttaaccgca
     6241 ggttcattca cagtagtgtt ttcttcgatg atggcaatgt tacgtcctct aaaatcactc
     6301 accaatgtga actcgcaatt ccaacgtgga atggcagcct gccaaacgtt atttgaattt
     6361 ttagatttaa aaactgaaaa agatcacggc ttaatctccg ttgctaaagc tgaaggcaat
     6421 gtggaattta aaaaggtaag ctttagttat gaaggtaaag aggaaaaagc actcgataat
     6481 atttctttca ccattcctaa aggcaaaaca gtagcattgg ttgggcgttc cggctcgggt
     6541 aaatcaacta ttgccaattt gcttacccgt ttttatgatg tgactgacgg tcaaattttg
     6601 cttgatggaa ttaatattca agattaccgc ttaaaaaact taagagaaca atgctcggtg
     6661 gtttctcaac aagttcattt gtttaacgat actattgcta ataatattgc ttatgctgca
     6721 atcgacaaat acagccgaga agaaattatt gctgctgcaa aagctgcaca cgcaatggaa
     6781 tttatcgaaa aattggaaaa tggcttagac actgtaattg gtgaaaatgg cgcaagtctt
     6841 tccggtgggc aacgccaacg cttggcaatc gctcgtgcat tactgcgaaa ttctcctgtg
     6901 cttgtgctgg atgaagctac ctctgcatta gatacggagt cagaaagagc gatccaatct
     6961 gcacttgaag tgctacagaa agatcgtacg gtgttggtca tagcacaccg gttatcaacg
     7021 attgaaaaag ccgatgaaat tttggtagtc gatcacggaa atattattga gcgtggcagc
     7081 catacggaat tgttagcaca aggtggggct tataaacaac tccatagttt acaattcgga
     7141 gcctaatttg taggggagaa atatgtttct ccccaattaa tgataaaaac agggcgaaaa
     7201 atatttcgtc cctacaataa tttatttgga tactatgaaa aaactgacaa aacttttatc
     7261 tcttagtgct ttactggtct taaccgcctg taattcggta ctaaatgcct caacagaggt
     7321 gcaacaacca acagtacaaa ttccgcatga cgatccacaa tggcagcagc atttagcgaa
     7381 actgagccaa attcaaggct atactgcaac ggggcaattt ggctatattt cgcctgaaga
     7441 gcgtttttct tcccatttca actggcgtta tactaatcca atccaatttg ggttagagct
     7501 ttcctcgaat ctctcgacta aatcactgaa attagagcgt aataaacgag gcttaacggt
     7561 ttcggacaat gagggtaata gccgttctga ccgtgatgtt gatgcgttaa tgcaagagat
     7621 tatcggtgtt tcgtttccta tcgatcagtt tgcctattgg gtaaaaggct tgcctgaaaa
     7681 agatggcaac tatattgtga atgaaaaacg ccagctgtcg caatttagtt atccgcttaa
     7741 tggcacgctt tggaaagcaa gctatgtgga gtatcacgaa gatcgtgtac caaacttacc
     7801 gaagctgatt gtgcttgaaa acggcactca aacgttgaag atccgcattg aaaaatgggc
     7861 gtattaatga agaaagtcac cttacccagc ccggcaaaat taaacctgtt tttatacatt
     7921 accaataagc gggcagacgg ttatcacgag ctacaaacgc tgtttcagtt tttagatttt
     7981 ggtgatgaaa ttgagattga gatcacagaa agttcagagg ttgaattaat taatccggta
     8041 gaaggggtgg caactgagga gaatctcatt taccgagcag caaaactttt gcaaaaaacg
     8101 accgcttgta ggcaaggctg ccgtattggg attaaaaaaa acctaccgat gggcggaggt
     8161 gttggtggtg gatcttctaa tgctgcaaca gtattagtcg gtttaaatca cttgtggaat
     8221 accgagcttt cattggaaaa attggcagaa ttaggcttaa gtttaggggc tgatgtgccg
     8281 atatttgtta gaggtatggc tgcttttgcc gaaggcgtgg gggaggtgtt aactccttgt
     8341 gatccacaag aaaaatggta tgtagtgcta aaaccagaag tgtcgatttc aaccgcagcg
     8401 gtgtttaccg acccgaattt acctagaaat acgccaaaac gccccttagc cgaattatta
     8461 tctttaccgt gggaaaacga ttgcgaaaaa gttgtacgag aaaagtattc tgcggttgaa
     8521 gatcttatac aagaattgtt acaatatgct cagtttaggc taacaggcac aggtgcttgt
     8581 attttcgccg aatttgaaac aaaagcagaa gccgagcagg tttttgcaca taaaccggaa
     8641 gccgtcttcg gttttgtggc gaaagggcaa aatatttcgc cattacatca aatgttattc
     8701 caaatctaac catcttaacc ttaaggatca atccatgaca gatattaaac tgtttgcggg
     8761 caacgcaact ccggaacttg ctaatcgtat tgcaaaacat ctttatacct cattaggtaa
     8821 tgcaacagtt ggtcgtttta gcgatggtga aattcaagta caaatcaatg aaaatgtgcg
     8881 tggaggcgat atttttattg tgcaatccac ttgtgcacca actaatgata atttaatgga
     8941 attgatcgtg atggtagatg cgcttcgccg tgcatcagct ggtcgtatta ccgcagtgat
     9001 tccgtatttc ggttatgcac gccaagacag acgcgtgcgt tcggcccgtg tgccaattac
     9061 cgcaaaagtg attgctgatt tcttatccag cgtaggggta gatagagtct taacctgcga
     9121 cttacacgca gagcaaattc aaggtttctt tgatgtgccg gtagataacg tatttggttc
     9181 ccctgtgtta atcgatgata ttttgaaaaa atccgatttg gtcaacccta tcgtggtttc
     9241 tccagatatt ggtggggttg ttcgtgcaag agcggtggca aaattattaa atgataccga
     9301 tatggcaatt attgataaac gtcgtccaaa agcgaatgta tcacaggtaa tgcacattat
     9361 cggtgatgtg gctgatcgtg actgtatttt agttgatgat atgatcgata ctggtggtac
     9421 tttagtcaaa gcggctgaag cgctgaaaga acgtggcgcc cgtcgtgtct ttgcttatgc
     9481 cacacacgcg gtattttcag gcacagcagc tcaaaattta gcgaatcctg ctttagatga
     9541 aattgtagta actgatacta ttccactgag taatgagatt aaagcattaa ataaagtacg
     9601 tgttttaaca ttatccggta tgttagcaga agcaattcgc cgtattagca atgaagaatc
     9661 catttcagca atgtttgatg cctaatttat gagaaaaaac ccagtcgaaa gattgggttt
     9721 ttcatatctg ttcactacta tatttagttt aagataattt gtatgtattc cctgattcgt
     9781 aaattacttt ttgcactaga tacggaaaaa gcacatcaat tctctattca ggcacttgct
     9841 ttagccggaa aatcgccttt ttcgattctg ccaacacccg ataatccgac ccaagtaatg
     9901 ggactcacgt ttaaaaatcc aatagggctt gcagccggag cggataaaaa cggtgaagcg
     9961 atagatggtt ttgggaaatt aggatttggg tttattgagg ttgggactat tactcctctc
    10021 gctcaagacg gaaaccctaa accgaggcaa tttcgtattg tagatgcaga gggaattatt
    10081 aaccgcaatg gatttaataa taaaggcgtt gatgttttag tagaaaatgt aaaaaatgca
    10141 acctatagtg gtattttagg tattaatatt ggaaaaaatg cggttacacc aattgagcat
    10201 agctttgatg actaccaaat ttgtttgcgt aaggtttacc aatatgctga ttatgtggcg
    10261 gtgaatattt catcacccaa taccaaaaat ttgcgcagtt tacaatatgg tgaggcatta
    10321 gatgatttgc tgcgaaacct caaaaatgag caggcacaac tttcgcaaaa aatggggaaa
    10381 tatcgaccgc ttgttttaaa gattgcgcct gatttaaccg atgaagaaat cgtttctgta
    10441 gccgatagtc ttattcgtta ccaaattgat ggggtgattg ccggcaatac taccttgtct
    10501 cgtgaaagta ttgccggatt accgtattcg gaacaactgg gtggattaag tggcaagcca
    10561 ttacactcat taagtacaag gttaatttca aaattatctg ccgagttggg cgagagaata
    10621 ccaattatag gttgtggggg agtccattcg ttagagagtg ggcaggagaa agtgaatgca
    10681 ggtgctagtt tattgcaagt ctattccgca atgatttacc aaggaccatc attaattcaa
    10741 accttagcca aacaccttca gctgaacagt tagggataga tttctagtta aaaatgattg
    10801 gttaggttta tttctgtcat cttagtggaa tagatggcgg tattagctat ctatcaaaaa
    10861 tagacaaaat tgcctatttt tgctatcttg cactgcaaat ttatctacaa aatttaaaca
    10921 aattttataa aattatataa aaatcgttta aaatcaaata gataataagt tttaatcatg
    10981 atttttagta tatgcctcaa gagaggttta attcggaaat tgttgtttta ctgaaatttt
    11041 ttcgataaga attggtctaa aaatcaccaa acaaacaaaa tttgttaaaa ttttgttatt
    11101 tatcacctca atcgttaatt tataaggaag aatactatgt cagagaactt aagaaatgac
    11161 gtagatccaa tcgaaactca ggattggtta gcatcactcg attcattaat tcgtgaagaa
    11221 ggtttagagc gcgctcaatt tatcattgaa caagttatta gccaagctcg tgcaggtggc
    11281 gtggcattac caacaggcgt aacaacagat tatgtcaata ctatccctgt ttccgagcag
    11341 ccagcttatc cgggtgatca taaaatcgaa cgtcgtattc gttctgcggt acgttggaat
    11401 gcgattgcgg cagtacttcg tagccagaag aaagatcttg acttaggtgg tcatatttca
    11461 actttccaat ctgcggcaac tatgtatgaa gtgtgtttta accacttttt caaagcacca
    11521 accgaaaaag atggtggtga tttagtgttc ttccaaggcc acgcagcacc gggtatgtat
    11581 ggtcgtgcgt tcttagaagg tcgtattacc gcagaacaaa tggataactt ccgtcaagaa
    11641 gcatttacag acggtttatc ttcttaccca caccctaaat taatgcctga attttggcaa
    11701 ttctctaccg tatctatggg tttaggaccg gtaaatgcta tttaccaagc tcgtttctta
    11761 aaatatttag aaaaccgtgg tctaaaagat acttcggctc aaaaagtata tgcattctta
    11821 ggcgatggcg aaatggatga aatcgaatct aaaggtgcat tatcattcgc cggtcgtgaa
    11881 aaattaaata acttaatctt cactattagc tgtaacttac aacgtttaga cggtccggtt
    11941 aacggtaacg gcaaaatcgt gcaagaatta gaagcactct ttaccggttg tggctgggaa
    12001 gtgattaaag tgttatgggg tagtggttgg gataaactgc ttgaaaaaga tacttcaggc
    12061 aaacttaaac agttaatgat ggaagtgctt gatggtgact atttaacctt caaatccaaa
    12121 aatggtgctt acgttcgtga acacttcttc ggtcgttacc ctgaaactgc agcattagtt
    12181 gctgatatga cagacgatga aatttgggca ttacgccgtg gtgcacacga ttctgaaaaa
    12241 ctttatgcag cctatgcaaa agcacaaaaa tcggacaaac cagttgtaat tttagctcac
    12301 caagtgaaag gctaccgtat tcctgaagcg gaaagtaaaa atactgctca ccaatcgaaa
    12361 aaaatgtcat tagacagctt aaaaggcttc cgtgactact tcgagctacc attaaccgat
    12421 gagcaagtag aaagcctaga gtatgtaaga ttccctgaag gttctgaaga gtacaactac
    12481 ttacacggac aacgtaaagc cttaaacggt tatgtgcctg tacgtaaacc gaaatttacg
    12541 gttgatttca aagtgcctga attaagcgaa ttccaagcat tattggatga gcaaccacgt
    12601 ggtatttcaa ccacaatggc gttctctcgt gtattgaata ctttattgaa agataaaaat
    12661 atcggtcagc aaatcgtacc tattattgcg gacgaagccc gtactttcgg tatggaaggt
    12721 ttattccgtc aaatcggtat ttataaccca catggtcaaa actatgtacc gtcagaccgt
    12781 gatttagtag cttactaccg tgaagcaaaa gatggccaag tgttacaaga aggtatcaat
    12841 gagttaggtg caacagcctc ttgggtggca gcagcgactt cttattctgt tagcaactta
    12901 ccgatgatcc cattcttcat ctactactca atgtttggtt tccaacgtgt aggcgatatg
    12961 atgtggttag ccggtgacca attagctcgt ggctttatga ttggtggtac ttcaggtcgt
    13021 acaacattaa acggtgaagg tttacaacac gaagatggtc atagccatat tcaagcaggt
    13081 gtaatcccga actgcgtcac ttatgaccct gcatttgcct ttgaggttgc ggttattgtt
    13141 caagacggta ttcgtcgtat gtatggtgaa aaccaagaag atatcttcta ctacattact
    13201 accttaaatg aaattaccga acagccggca atgccggcag gtgcggaaga aggtatccgt
    13261 aaaggtttat ataaatttga aaccgttgag ggtaaaggta aaggtcacgt acaattatta
    13321 agctcaggtg caattatgcg tcacgtgcgt gcagctgcac aaattctcgc gaatgactac
    13381 ggcattacag cagatgtatt ctcagcacca tcattcaatg aattaggtcg tgatggagca
    13441 gatgtggctc gttggaactt attacaccca actgaaacac cacgtgtacc gtacgttgct
    13501 caagtgttac aagatttacc gactgttgct tcaaccgact atatgaaaat gtacgcagag
    13561 caaatccgtg cttatgtacc aagtaaacac tatcacgtgt taggtacaga cggtttcggt
    13621 cgttcagaca gccgtgcaaa cttacgtgaa cacttcgaag ttgatgagcg ttatgtagta
    13681 gttgcagccc tcgctcaatt agcgaaagaa ggtacagttg aaaacaaagt ggttgcggaa
    13741 gctattacta aattcggctt aaatgtagat cgtattaacc cattatatgc gtaatttcta
    13801 atactctctc ccttgatggg agagagacag ctaaaggttt cgtttagaaa cttttagcag
    13861 agagggtatt agttttattt gcaaaaatgt tgagaaaatc aaccgcttgc attcccttct
    13921 ccctgatttt tcttcttaca aagaaaaatc tgtccctccc acaatgggag agggggtaac
    13981 tcaagaagga tttcaaaatg tcaaaacaaa ttaatgtgcc ggacatcggt tcggatgaag
    14041 tcagtgtgac tgaagtgatg gtaaaagttg gtgatactat ttcagtagat caatcaatta
    14101 ttaacgtaga aggcgataaa gcctctatgg aagtgccggc tcctgaagca ggtgtggtaa
    14161 aagaagtttt agtgaaagtg ggtgataaag tttcaaccgg ttcaccaatg ttaattttag
    14221 agtcagcaga tgctgctcct gctcaagaag caccaaaagc agaagcagct cctgctgctc
    14281 cagtagcaac aacttcagcc gttgttgaag taaatgtacc tgatatcggt ggcgatgaag
    14341 ttaacgtaac cgaaattatg gttaaagtag gtgatagcgt tgaagtggat caatctatca
    14401 tcaacgttga aggtgataaa gcctcaatgg aagtgcctgc accggttgcc ggcgtagtaa
    14461 aagaaatctt aatcaatgtg ggtgacaaag tttcaactgg taaattgatt atgaaatttg
    14521 aaacggcttc cgcagctaca gcacaatcta caccggttgc ggaagctgct ccagctcaag
    14581 cttcggcatc agcgattaaa gatgtaaatg taccggacat cggtggtgat gaagtaaacg
    14641 taactgaaat tatggttaaa gtgggtgatt ctgtttcaga agaacaatct ttaatcacgg
    14701 ttgaaggtga taaagcttca atggaagttc cggctccatt tgccggtgtg gtgaaagaaa
    14761 ttttagtgaa atcaggtgat aaagtttcaa ccggttcatt aattatgaaa tttgaagtag
    14821 cgggtgcggc accggctccg gcggctgctc aagcggcttc agctcctgct cctgctccac
    14881 aagcagcagc tccggcgaaa gctgacgcag ctccggcagg tcaaaaccaa tcaggtttaa
    14941 gccaagaaca agtggtggct tcagctggct atgcacacgc aacaccggta attcgccgtt
    15001 tagctcgtga gtttggtgta aacctagaca aagtaaaagg tacaggtcgt aaaggccgta
    15061 tcgttaaaga agatattcaa gcatacgtta aaacggctgt tcaagtattt gaaaaacaag
    15121 gcggaacagc agcggcagca acaggtgcgg caaacggtgc aggcttaggt ttattaccgt
    15181 ggccgaaagt agatttcagc aagtttggtg aagttgaaga agttgaatta agccgtatca
    15241 ataagatttc cggtgcgaac ttacaccgta actgggtaat gattcctcac gttacacatt
    15301 tcgatcgcac agacattacc gagttagaaa acttccgtaa agagcaaaat aaagaagcgg
    15361 aaaaacgtaa attagacgtg aaaattaccc ctgtggtctt cattatgaaa gcagtggcaa
    15421 gtgcattaga agccttccct cgtttcaaca gctcaatttc tgaagatgca caacgtttaa
    15481 ccttgaaaaa atacatcaat atcggggttg cggttgatac gccaaacggt ttagtggtgc
    15541 cggtgttcaa aaatgtgaac aaaaaaggca ttatcgaact ttctcgcgaa ttaatggaag
    15601 tctcgaaaaa agcccgtgaa ggtaaattga cagcatctga tatgcaaggt ggctgtttca
    15661 caatttcaag tttaggcggt attggtacaa cgcactttac gccaatcgtg aatgcaccgg
    15721 aagtggctat tttaggtgtg tctaaatctg aaatgcaacc gatttggaat ggcaaagagt
    15781 ttgaaccacg cttaatgctt ccgctttcat tatcattcga ccaccgtgtg atcgatggtg
    15841 ctgatggtgc gagattctta agctatatta atagcgtgtt ggcagatatt cgtcgtttag
    15901 tgatgtaatt cggtaaagct cctcctaaaa aagtccctct ttagaaaaga ggggtagggg
    15961 gagatttgat agacgtaatt tacgaagaga ataaattatt tggtagaaat ttgtgtttga
    16021 ttgattgctc tctcacttcg ctttatattc tgccaaatct cccttacccc tctttgctaa
    16081 agggggggaa taaaaagagg aaaaactatg agcaaagaaa ttaaaaccca agttgtcgta
    16141 cttggtgcag gtccagcagg ttactcagcg gcattccgtt gtgccgactt aggcttagaa
    16201 acagtaattg ttgagcgtta ttcaacctta ggtggtattt gcttaaacgt aggttgtatc
    16261 ccttctaaag cattattaca cgttgcaaaa gtaattgaag aagctaaaaa tgcagtacac
    16321 aacggtgtga cctttggtga gccaacgatt gatttagatc aggtacgtgc tggtaaagaa
    16381 gccgttgttt caaaattaac cggtggctta gcaggaatgg ctaaggctcg taaagtgaca
    16441 gtagtagaag gcttggctgc atttactggt ccgaatacgt tagtcgctcg tgatcgtgac
    16501 ggcaatccta caactatcac gttcgataat gcgattatcg cagcaggttc tcgtccgatt
    16561 caactaccat ttattccaca cgaagaccca cgagtttggg attcaaccga tgctcttaaa
    16621 ttaaaagaag taccgaaaaa actccttatt atgggtggtg gtattatcgg tttagaaatg
    16681 ggaacggtat ataacgcgct tggttcagaa gtggaagtgg ttgaaatgtt cgaccaagta
    16741 attcctgctg cagataaaga tgttgtagcg atttacacca aacaaatcga gaaaaaattc
    16801 aagctaatgc ttgaaaccaa agtaaccgca gtagaagcta aagatgacgg tatctatgta
    16861 tcaatggaag gtaaggcttg caacgatact aaacgttatg atgcggtatt agtcgctatc
    16921 ggacgtgtgc caaacggtaa attaattgat gccggtaaag ctggagtgga agtagatgag
    16981 cgtggcttta ttcgtgtaga taaacaaatg cgtaccaatg tgccacacat ctttgctatt
    17041 ggtgatattg tcggccagcc gatgttagct cacaaaggtg tacacgaggg acacgtggca
    17101 gcagaagtga ttgcaggaat gaaacattac ttcgatccga aagtcattcc gtccatcgct
    17161 tatactgaac cagaagtggc ttgggttggt aaaactgaga aagagtgtaa acaagaaggc
    17221 ttgaactacg aagtggcgaa attcccttgg gctgcttcag gtcgtgcgat tgcttctgaa
    17281 tgctcagaag gtatgaccaa gttaattttt gataaagata ctcaccgtgt attaggtggt
    17341 gcgattgttg gtagcaatgg tggcgaatta ttaggcgaaa tcggtcttgc aatcgaaatg
    17401 ggctgtgatg ctgaagatat cgcattaacc attcatgctc acccaacgtt acacgaatcg
    17461 gtaggattag cggcagaagt atttgaaggt tcaattacag acttaccaaa tgcgaaagcc
    17521 aaaaagcgtt aatcagatta tttaatctct aaaaaataag cggttgtatt ttgtaaattt
    17581 tttgcaaaat acaaccgctt gattattttt aaaactaaac tattgaatag tgagtttttt
    17641 ttcagcattt gaatctagaa tgttaaattt agcattgaca taaaatgata aatccgtaaa
    17701 atgcacctcg ttccacagcg caatgttgtg ggaattcaga tgcgggaata gctcagttgg
    17761 tagagcacga ccttgccaag gtcggggtcg cgagttcgag cctcgtttcc cgctccaatt
    17821 tccaaatctt atggcgtgtt agcaaagcgg ttatgcactg gattgcaaat ccatgtagct
    17881 cggttcgact ccgggacacg cctccatcac tatttaaata gcaactcttg ttctaaatct
    17941 tcaattgctt ttaaacattt cattttgcga tattctgtct ctgtaatttg attttgcagg
    18001 gtttgtttag ttgcttcatt ttgcgtattt aaattttgct caactaacca gctaattttc
    18061 tcgttcaatg cacgtaacgc tttacggtat tcttgtaagc gtttgttggg cgctaaacga
    18121 tgaatatttg gagaaaattg ataggaagaa tggaattgag ctgattctgg cttactttgg
    18181 attttttcta cggcattctt taatgcatca acttgtttaa ccaatttttc agcgtaaaat
    18241 tcactatata acacctcagt ttggttcaat aatagctcaa ctgttttttc aatttcagca
    18301 atgaacacac tcaccaaacc ggtttgctgt gagaaatagg gtgaattcag aaaaatatta
    18361 tccgttgaaa atacatttaa ttccgagagg ttttgtttta tttgggcgat aaaaagtttt
    18421 ttttgcatgg ttgatgttat caataaagaa aatttaagtg aattttattt catataactt
    18481 ctattttaaa gcaaa
//
LOCUS       DANLXO010000049        18244 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.049, whole genome shotgun sequence.
ACCESSION   DANLXO010000049 DANLXO010000000
VERSION     DANLXO010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18244
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.049"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..787
                     /locus_tag="PXD69_001396"
     CDS             <1..787
                     /locus_tag="PXD69_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283595.1"
                     /translation="TIQNDELIDDWVKINDFPDVSNLLEVTINDEQWLVLERHDDFRE
                     LAKFGQKETYDRQMWLQIRSYLVKESQFSKAKNWLAQQDFMERWMPEGNEHYGMNIHQ
                     FFAENTLNEWQEIYRHRENKSPSFKVIPSVDSHTWESTYGNDGISFYAPIPMLYHGMK
                     MKNAIKDGYWVDLQNNLVCFNPEINEKFQNSLLVKKDKFLDFLKEHKLKLVWTVLGEK
                     HAYKESKFLQELSGVYYLYGKNQQVQGSIKHFIQEIEHWGEKQ"
     gene            784..1494
                     /locus_tag="PXD69_001397"
     CDS             784..1494
                     /locus_tag="PXD69_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6283596.1"
                     /translation="MNLNTLRLFVAVIQHGSLSKASERLNVPIATISRQIADLEKELN
                     IQLFDRQKSGVKPTMAGQRLYEQVHLSIEQLATAKEVLFEEQGNLKGKLRLSASPACE
                     PVLAWIADFQAAYPQVQVHCTLTDRLLDLSADGIDVAFRIGQLHGEQFIAKKVGQIGS
                     KWVAHPKFLARFGTPSTVKDLKNFPIAAWAKNEASVITLGTGRQAVEIPYLFSSNDSY
                     AIEYMAKSSGSACRQHGG"
     gene            1463..1645
                     /locus_tag="PXD69_001398"
     CDS             1463..1645
                     /locus_tag="PXD69_001398"
                     /inference="COORDINATES: protein motif:HMM:NF015431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6283597.1"
                     /translation="MALLADSTVDRLVAENGLVEVLGETENPKFDLTMIYAAHRYPSS
                     IVRAFVGFVLEQVKAN"
     gene            complement(1719..2168)
                     /gene="nrdR"
                     /locus_tag="PXD69_001399"
     CDS             complement(1719..2168)
                     /gene="nrdR"
                     /locus_tag="PXD69_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HDL6283598.1"
                     /translation="MRCPFCSTEETKVIDSRLAASGYQIRRRRECISCKERFTTFESA
                     ELVVPYVIKNNGSREPFDAEKLRTGLRRALNKRPVSADDVEKAISQIIIQLQAMGERE
                     VPSRHIGTLAMNALKQLDKVAYIRFASIYLSFSDIEEFIKEIEKLKE"
     gene            complement(2168..2473)
                     /locus_tag="PXD69_001400"
     CDS             complement(2168..2473)
                     /locus_tag="PXD69_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HDL6283599.1"
                     /translation="MNTKPTQPITLCAIYRSKAKEGMYLYVPKRDQFEQVPETLRQLF
                     GKPEFVMMFNLTGEKPLVRAKNEEVLQLLIEQGYYLQMPPPPENLHKAFIAQQKGEK"
     gene            complement(2463..3926)
                     /locus_tag="PXD69_001401"
     CDS             complement(2463..3926)
                     /locus_tag="PXD69_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL6283600.1"
                     /translation="MAEYSGTTQEKMKDKQVEQINISPHSIEAEQAVLGGIMLSNDHW
                     DNVAERVQPHDFYNYAHRIIFEQMAELVRHNKPIDIITLDQALKDKGVLQDVGGFAYL
                     AELSKNTPSAANILAYADIVRDRSDLRSVISAGNQIAEMGYKTKGRNSKEVLDEAERI
                     VFEIAEKRNNANEGPQRIDDILLKTLARMDTLSKNRHNGGVTGVSTGFVDLNKKTAGL
                     QPSDLIIVAARPSMGKTTFAMNLCENASLVDIEDKDDLDEQGNPKKKPAKPVLIFSLE
                     MPADQIMMRMLASLSRVDQTKIRTGQISDDEDTAKISSTMAILQERNNIYIDDSSGLT
                     PTELRSRARRIYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEV
                     PVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSDLKGIAE
                     IIIGKQRNGPIGRVRLTFQGQYSRFDNYTGGHYDDEY"
     gene            4100..4999
                     /locus_tag="PXD69_001402"
     CDS             4100..4999
                     /locus_tag="PXD69_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6283601.1"
                     /translation="MIKKALFALTATAVFAASAFAKDVTIPTARGEVTFKETPSKIAV
                     FDTGSLDTLQALGVKIDGMPEFKVLSYLKPSADKAVNVGTVFEPDLEALNSLNPDLII
                     VGTRTAKKFDEVSQIAKTIDMTDNGDKLIESGLQRLDSFGKLFNKEAETEKLKAEINT
                     LLDQTKAAVKGKGNGLIILVNGGKISAFGSGYRLSWIHDNLGIPMADSSIKNTGHGQP
                     VSFEFIQKLNPDWLFVLDRIAAIGQEGQSAQQVLDNELVRQTKAWKNGNIVYLSAASY
                     LAPGGYEQMKTDLTNIKTAFEKK"
     gene            5093..6061
                     /locus_tag="PXD69_001403"
     CDS             5093..6061
                     /locus_tag="PXD69_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL6283602.1"
                     /translation="MFSFFRLNLFLLILLIPISASVGVADFHWSEIFHSSEQSQIFFI
                     SRLPRTLAVILVGATLAVAGMVLQIVLKNRFIEPSMIGTSQSAAIGILLASLLFPTSA
                     LLLKMSIATLSALMGMGLFMLLIRQLPPHQQLMLPLIGIVFGNVIEAISTFIAYETDS
                     LQVLSIWFSGDFSGILAGRYELLWITAILAVVVYVMADQLTIAGLGENISTNLGINYK
                     QMTWLALIVVAMITAIVVVTVGQIPFIGLVVPNIVSRIAGDRLRKNLPAVVVLGANLV
                     LICDILGRAINAPYEVPISTIFGIIGTVIFLYLLLKEKRAEEKARG"
     gene            6114..6990
                     /locus_tag="PXD69_001404"
                     /pseudo
     CDS             6114..6990
                     /locus_tag="PXD69_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
     gene            7010..7768
                     /locus_tag="PXD69_001405"
     CDS             7010..7768
                     /locus_tag="PXD69_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL6283603.1"
                     /translation="MITVKNLHHKIGNATILNNINLTIPNGGITALIGANGAGKSTLL
                     SLIARLQPIQQGEIHLNELNIANTASQTIARQLAILTQDNVIHSRITVKDLLLFGRYP
                     HHQGRITSHDNAIVEEALVRFDLSTFSHRFLNELSGGQRQRALIAMTFCQQTDHILLD
                     EPLNNLDMFHARELMKLLRKLTDELALTTIMVVHDINIAAAYADTIIAMKDGGIKMIG
                     TPKEIITTENLKTVFNLDAEVLECQGKPLVIHHI"
     gene            complement(7945..10512)
                     /gene="glnD"
                     /locus_tag="PXD69_001406"
     CDS             complement(7945..10512)
                     /gene="glnD"
                     /locus_tag="PXD69_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HDL6283604.1"
                     /translation="MMKNSNELKTLLSAFTEQQRQAFQSENVLSLLAQRSQFYDQLLQ
                     ALWQDFGLAQYEHITLLAVGGYGREEMFPLSDLDILVLTEKPLEEAIQQRLNELFALL
                     WDSKLQLGTSVRTLEECIQIGKAEISVATNMLEGRFLLGNKSLWLRLKEALYQPDFWD
                     IKAFFRAKMAEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLISWIMLRHYGVSSFVD
                     LLNKGLLYPEEYKELIAAQAVLFRMRFALHLQLKRYDNRLRFDRQLQLSEILGYQGEA
                     NQAVELMMRDYFQATKSISQLSQLLLNSFEQAYVNELQKNAQKQPLDQYFYRQEQQLF
                     VVERKIFKTQPTTMLDLFFHLTNDPTLIANADTLRQLRLCLQQQHEPMCFLPEMREKF
                     VQLFAQPKVISRAIVPMHQLGFLSAYLPQWKGIEGLMQFDLFHIYTVDEHTVRVMLNL
                     ENFSEDPSRAFFPLCHQLFATLSEKPLLYLAALFHDIGKGREGEHAQVGALDMREFAE
                     LHGFSQAQINDMVWLVAEHLTMSITAQRRDIHDPQIISEFAKKVQNQTALSSLLCLTV
                     ADICATSESLWNDWKASLFTQLYQFTLQQLAQNLNYQAVAQEHRLQALELMKFVLSAD
                     ERIALNAFWQPCPERYFLHHTPTQLVWHALHYVKTRRLPMVLISNEYARGGTEIFVCC
                     QDQPQLFARIAQLLSQKRISIHDAQIITTENGVVLDSFIVSERDGDDDLTDERCMQIQ
                     QAMMKMLSLTETGIKFTKKPVKHLSFKRKTRLRFLPPSSKQQTEFELFTLDREGLLAQ
                     IGYIFNRLRLNLINAKITTIGERVEDFFVVSNDQGKALSEQEQLELKAILITELDSE"
     gene            10624..11601
                     /locus_tag="PXD69_001407"
     CDS             10624..11601
                     /locus_tag="PXD69_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HDL6283605.1"
                     /translation="MTLAVAAIIGGLIILVWSADRFVEGAASTARHFGMTPLLIGIVV
                     IGFGTSAPEMLVSASSALSGSPGIALGNAYGSNITNIALILGLTAIIKPLSVNSDVLK
                     KELPILLAVTLLSAYLVYDANVTQLDAIILLAVFFVYMAWTIITAMKSKNDALSLDVD
                     AELTNSAKMGLGKSILWLIIGLVSLVISSQFLVWGAVEVAKFFGVSDLVIGLTIVAVG
                     TSLPELASSIAAARKGEVDLALGNIIGSNLFNTLAVVGIAGAIEPMQVSAEVFSRDVL
                     MMSALTFLLFIFGINLYRRTEGGRINRLEGLLLFAAYVGYNFYLFKTAG"
     gene            complement(11658..12740)
                     /gene="serC"
                     /locus_tag="PXD69_001408"
     CDS             complement(11658..12740)
                     /gene="serC"
                     /locus_tag="PXD69_001408"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDL6283606.1"
                     /translation="MTEIYNFSAGPAMMPKKVLEKAQQELLNWLDQGTSVMEVSHRGK
                     LFMELAAQSEADLRKLYNVPDNYRILFLQGGARGQFAAIPMNLIGKKGKALYLNSGHW
                     SATAAKEARNFAEIDEINILETEPQLKVSRLDFSDIAEQYDYIHYCTNETISGVEIFD
                     IPNVGNTPLVADMSSNILARGIDINKFGVIYAGAQKNLGPAGITIVIIRDDLIGNARK
                     DTPSIWNYATQRDADSMINTPPTFAWYLCSLVFQHLLAEGGLKATEERNLAKATLLYE
                     YLDSSTFYYNTVAHENRSLMNVTFTTGNDELNAKFVAEATACGLQALKGHKVLGGMRA
                     SIYNAMPIDGVKALIEFMKVFEQRNA"
     gene            13072..13752
                     /locus_tag="PXD69_001409"
     CDS             13072..13752
                     /locus_tag="PXD69_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00153 family protein"
                     /protein_id="HDL6283607.1"
                     /translation="MALNNILGLFAQSPLKPLQKHSNKVTECSELLESFFEATFEHDW
                     EKAAEVRGKIVDLERRADALKREIRLKLPRGLFMPVERGDLLELVTQLDKLANYSRDI
                     SGRIIGRKLIIPTEMQPLFKKFLSRSIDASRQVRKVLDEMDQLLETGFRGRELDFVNK
                     MILELDQIEDDTDQYQITLRHTLLELEKNLNPIDVMFLYKCIERISVLADQAQRIGSR
                     IELMLAKS"
     gene            13764..15032
                     /locus_tag="PXD69_001410"
     CDS             13764..15032
                     /locus_tag="PXD69_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDL6283608.1"
                     /translation="MELLNQYGSILVIITAIVGFMMAFGIGANDVSNAMGTSVGSGTI
                     TIKQAILIAMVFEFAGAYLAGGEVADTIKSGIIDPAQFANSPDILVLGMMASLCAAGM
                     WLIIATKMGWPVSATHTIIGAVIGFALITIGSDAIQWDALGGIVGSWFVTPILAGIVA
                     YSIFINSQKLIFNRSNPFKQAKKYGPMYMGITIFILVIVTVSKGLKHVGLHLDTAETL
                     GISFALALLAFIIGYFYFRSKSFAMKARAEEKGFAGVEKIFSILMLITACAMAFAHGS
                     NDVANAIGPLAAVESIVRSGGMIEGKTTLAPWILPLGALGMMIGLAIMGKNVMATVGT
                     GITDLTPSRGFAAQFACAVTVVIASGTGLPISTTQTLVGAVLGVGFARGIAALNLGVI
                     RNIVISWVITLPVGAVLSIIIYYILSAIFY"
     gene            15087..15698
                     /locus_tag="PXD69_001411"
     CDS             15087..15698
                     /locus_tag="PXD69_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDL6283609.1"
                     /translation="MKKLSSALLSCFLLGLSSPALTADTYITENLSTFMRKGAGDQFR
                     ISGAIQAGEKVTVLDRKERYSLIRDSRNREGWVLNSDLSDTASPKELIPQLKQQVQDL
                     TNRLSKIDTEWQQRTAEMQRRTQDSVQKSSDLVEENAQLKRELEILKNKNRDLETMHD
                     SEKREIVIQWFIYGGAVLGAGLLLGLLVPFLIPRRRRNNSGWA"
     gene            complement(15752..17050)
                     /gene="aroA"
                     /locus_tag="PXD69_001412"
     CDS             complement(15752..17050)
                     /gene="aroA"
                     /locus_tag="PXD69_001412"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDL6283610.1"
                     /translation="MEKLTLTPISRVEGEINLPGSKSLSNRALLLAALATGTTQVTNL
                     LDSDDIRHMLNALKALGVKYELSDDKTVCVVEGIGGAFKVQNGLSLFLGNAGTAMRPL
                     AAALCLKGEEKSQIILTGEPRMKERPIKHLVDALRQVGAEVQYLENEGYPPLAISNSG
                     LQGGKVQIDGSISSQFLTALLMSAPLAEGDMEIEIIGDLVSKPYIDITLSMMNDFGIT
                     VENRDYKTFLVKGKQGYVAPQGNYLVEGDASSASYFLASGAIKGKVKVTGIGKKSIQG
                     DRLFADVLEKMGAKITWGEDFIQAEQSPLKGVDMDMNHIPDAAMTIATTALFAEGETV
                     IRNIYNWRVKETDRLTAMATELRKVGAEVEEGEDFIRIQPLALENFQHAEIETYNDHR
                     MAMCFSLIALSNTEVTILDPNCTAKTFPTYFRELEKLSVR"
     gene            complement(17096..18190)
                     /locus_tag="PXD69_001413"
     CDS             complement(17096..18190)
                     /locus_tag="PXD69_001413"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL6283611.1"
                     /translation="MQFINIANEGVKSLSPYQAGKPIEELERELGIQNIIKLASNENP
                     FGFPESAKKAILNQLDDLTRYPDSNGFELKTTIAQKFGVQANQITLGNGSNDLLELFA
                     HTFAGEQDEIIYSQYAFIVYPLVTKAINAVAREILAKNWGHNLDAFLAAITEKTKLIF
                     IANPNNPTGNFLTQAEIEGFLAKVPANVIVVLDEAYTEFTAPQERVDSFGLLAKYPNL
                     IVSRSLSKAYGLAGLRIGYAVSNPEIADLLNRVRQPFNCNSLALASAIAVMNDDEFVK
                     KVAENNRLEMARYEAFCQANGLEYIPSKGNFITIDFKRPAAPIYEALLREGVIVRSIA
                     GYGMPNHLRISIGLPQENERFFTALLKVLA"
BASE COUNT         5196 a         3660 c         3614 g         5774 t
ORIGIN      
        1 taccattcaa aatgatgaat taattgatga ttgggtaaaa ataaatgatt ttcctgatgt
       61 tagtaatctt ttggaagtaa cgattaatga tgaacagtgg cttgttctag aaagacacga
      121 tgattttcgt gaattagcaa aatttgggca aaaagaaact tatgataggc aaatgtggtt
      181 acaaattaga agttatttag ttaaagaatc tcaattttca aaagcaaaaa attggttggc
      241 acaacaagat tttatggaaa gatggatgcc agaaggtaat gaacactatg gaatgaatat
      301 tcatcaattt tttgccgaaa atacattaaa tgagtggcaa gaaatttatc gacataggga
      361 aaataaatcg ccttcattta aggtaatacc tagtgtcgat tctcacactt gggaatctac
      421 ttatggcaat gacggcattt cattttatgc gccaattcct atgctttatc acggaatgaa
      481 aatgaaaaat gcgattaaag atggttattg ggttgattta caaaataatt tggtttgctt
      541 taatccagag ataaatgaaa aatttcaaaa tagcttactg gttaaaaaag acaaattttt
      601 ggatttttta aaagagcata agttaaagtt agtttggact gtgttgggtg aaaaacacgc
      661 ttataaagaa agtaaatttt tacaagaact ttcaggcgtt tattatctat atggtaaaaa
      721 tcaacaagtc caaggcagta ttaaacattt tattcaagaa attgaacatt ggggagaaaa
      781 acaatgaacc tcaacaccct ccgcctcttt gtcgccgtta tccagcacgg cagtctctcc
      841 aaagcctccg agcgactcaa tgtgccgatt gcaaccatta gccgtcaaat tgccgatttg
      901 gaaaaagagc ttaacattca actctttgac cgccaaaaat caggcgttaa acccacaatg
      961 gcagggcaac gcctgtatga acaggtgcat ttgtccattg aacagcttgc cactgccaaa
     1021 gaagtgttgt ttgaagagca aggcaattta aagggtaaat tacgcctgtc ggcaagccct
     1081 gcctgcgagc ctgttttggc gtggatagct gattttcagg cagcttatcc acaagtacaa
     1141 gtgcattgca cgctgaccga ccgtcttttg gatttgtcgg cagatggcat tgatgtggcg
     1201 tttcggattg ggcaactaca cggcgaacag tttatcgcca aaaaagtggg gcaaatcggc
     1261 agtaaatggg tggcacaccc taaatttttg gcacgctttg gcacgcccag caccgtcaaa
     1321 gatttgaaaa atttccccat tgccgcttgg gcaaaaaatg aagcaagcgt catcacgcta
     1381 ggcactggca gacaagcggt agaaattccc tatctttttt ccagcaatga cagctatgcc
     1441 attgaatata tggcaaaaag cagtggctct gcttgccgac agcacggtgg atagattggt
     1501 ggcagaaaat ggcttggtgg aagtcttggg tgagacagaa aaccccaaat ttgatttgac
     1561 gatgatttat gccgcccatc gttatccgtc tagcattgtg cgggcgtttg tagggtttgt
     1621 gttggaacaa gtaaaagcta attgagtatt tttaaagaaa aatgaccgct tgtggatttt
     1681 aaactcacaa gcggtcattt ttttatgttt ttttgcaact actcttttaa tttttcaatt
     1741 tctttaatga actcttcaat atcactaaag cttaaataaa tagaggcaaa gcggatatat
     1801 gctactttgt ctaattgttt aagtgcgttc attgccaatg taccgatatg gcgactcggc
     1861 acttctcgtt cgcccatcgc ttgcagctga ataatgattt ggctaattgc tttttcgaca
     1921 tcatcagcac tgacagggcg tttatttaat gcacgtctta accctgttct taatttttcg
     1981 gcatcaaacg gctctcggct accattattt ttgatcacat aaggcacaac taattcggcc
     2041 gattcaaagg tagtaaaacg ttctttacag cttatacatt cacggcggcg gcgaatttga
     2101 taaccgcttg ctgcaagccg tgaatcgatc actttagttt cttcagtgga acaaaatggg
     2161 cagcgcatta tttttcccct ttctgttgtg cgataaaggc tttatgcaaa ttctccggcg
     2221 gaggtggcat ttgcaaatag tagccttgct ctataagtaa ttgtaacact tcttcgtttt
     2281 tagcacgcac caatggcttt tcaccggtta aattaaacat catcacaaat tcaggcttac
     2341 caaataactg gcgtaatgtt tccggcactt gctcaaattg gtcacgctta ggcacatata
     2401 aatacattcc ttcttttgcc ttactgcgat aaatcgcaca aagtgtgatt ggctgggttg
     2461 gtttagtatt catcatcata atgccctcct gtgtaattat caaaacggga atactgccct
     2521 tggaacgtta aacgcacccg accaatcggg ccgttacgtt gttttccgat aataatttcc
     2581 gcaatgcctt tcagatcgga attgtcgtta tagacctcat cacgataaat aaacataatt
     2641 aagtctgcat cttgctcaat agaacctgac tcacgcaaat ccgagtttac cggacgttta
     2701 tcggcacgtt gttccaaact ccggtttagc tgagaaagag cgactactgg cacttctaat
     2761 tctttcgcta gtgcctttaa agaacgggaa atttctgcga tttctaaagt acgattatct
     2821 gcaaatcccg gcgctcgcat taattggaga tagtccacca taatcaagct taatccgcca
     2881 ttttcacgat aaatccgtct cgctcgagaa cgtaattcgg tcggtgttaa accggagcta
     2941 tcatcaatat agatattatt acgttcttgt aaaattgcca ttgtgctgga gattttagca
     3001 gtgtcttcat catctgaaat ctgaccggtt cggatcttgg tttgatcgac ccgagaaagt
     3061 gaggcaagca tacgcatcat aatttggtct gccggcatct ccaggctgaa aattagcact
     3121 ggctttgccg gttttttctt cggattaccc tgttcgtcta aatcatcttt atcttcaata
     3181 tccactaatg aggcattttc acataagttc attgcaaaag tagttttccc cattgaagga
     3241 cgggctgcca caatgattaa atccgaaggc tgtaaccctg cggttttttt attgagatca
     3301 acaaacccgg tagaaacacc agtaactccg ccgttatggc gatttttaga tagcgtatcc
     3361 attcgagcga gtgttttaag caaaatatcg tcaatacgtt gtggaccttc attggcgtta
     3421 ttgcgttttt ctgcaatttc aaacacaatt cgctctgcct cgtctaacac ttctttggag
     3481 ttacgccctt tcgttttgta gcccatttcc gcaatttgat tgccggcact gattacactt
     3541 cttaaatcgg aacgatctcg cacaatatcc gcataggcta aaatatttgc tgcactcggg
     3601 gtatttttag aaagctcggc taaataggca aaacctccta catcttgcag cacccctttg
     3661 tcttttaagg cttgatccag cgtaataata tcaatcggtt tattgtggcg caccaactcc
     3721 gccatttgtt caaaaataat tcgatgcgca tagttgtaaa aatcgtgcgg ttgtacacgc
     3781 tcagcaacat tatcccagtg atcattactg agcataatgc caccaagcac cgcttgctct
     3841 gcctcaatcg aatgtggtga gatattaatt tgctcaacct gcttatcttt catcttctct
     3901 tgggttgttc cgctatattc tgccatattt ttctcttgct ataatgacgt attgatgtac
     3961 atagtgtatc ggaattttaa ttaaattgaa atttgcaaat tttaggcaaa attcgcccgc
     4021 ttgttatttt ccgctttact taaaatcaat tttcgttaaa atctttgaga attattttca
     4081 atataaatgg agttatccaa tgattaaaaa agccttgttt gcattgaccg caactgctgt
     4141 gtttgctgct tctgcatttg ccaaagatgt tactattcca actgcacgtg gagaggttac
     4201 tttcaaagaa accccgtcta aaattgccgt gtttgacacc ggaagtttgg atactttaca
     4261 agccttaggt gtaaaaattg acggtatgcc tgaatttaag gtgctttctt atcttaaacc
     4321 gagtgcagac aaagcggtga atgtcggtac ggtatttgag ccggatttag aagcgttaaa
     4381 ttctttaaat ccggatttga tcattgttgg cacacgcaca gcaaaaaaat ttgatgaagt
     4441 cagccaaatt gcgaaaacca tcgacatgac ggataatggc gataaattaa tcgaaagcgg
     4501 attacagcgt cttgattctt tcggcaaatt atttaataaa gaagcggaaa ccgaaaaact
     4561 aaaagcagaa attaatactt tattagacca aaccaaagca gcagtaaaag gtaaaggtaa
     4621 cggactgatt attttagtca atggtggcaa aatttctgca tttggttcag gttatcgttt
     4681 aagttggatt cacgataatt tagggattcc aatggcagat tctagcatta aaaataccgg
     4741 tcacggtcag cctgtttcgt ttgaatttat ccaaaaactc aatccggatt ggttgtttgt
     4801 gttagaccgt attgcggcta tcggacaaga aggtcaatca gcccaacaag tgttggataa
     4861 tgaattagtt cgtcaaacta aagcttggaa aaacggtaat atcgtttatc taagtgctgc
     4921 ctcatattta gcgccgggtg gttatgagca gatgaaaacc gacctaacta acattaaaac
     4981 agcatttgag aaaaaataat taaccttaca agcggtcaga tttcctccta tttttgcaag
     5041 tgcctgcatt tgtaaaaaag agagagaata tgaccgcttg ctatttatca ctatgttctc
     5101 tttttttaga ttaaatctat ttcttttaat attgctcatt ccaatcagtg ccagtgtggg
     5161 tgtggcagat tttcattgga gtgaaatttt tcattcttcc gaacaaagtc agatcttttt
     5221 tatcagccgt ttaccaagaa cgctcgcagt gatattagtc ggtgcaacct tagccgttgc
     5281 aggtatggta ttacaaattg tgctgaagaa ccgctttatt gagcctagta tgattggcac
     5341 tagccaaagt gcggcaattg gtattttact tgctagttta cttttcccaa catcagcatt
     5401 actgttaaaa atgtctattg ccacattaag tgcattaatg ggaatggggc tttttatgtt
     5461 gctcattcgt caattaccgc ctcatcaaca attaatgctc ccattaatcg ggatcgtttt
     5521 tggcaatgtt attgaagcta tcagcacttt tattgcttat gaaactgaca gcctacaagt
     5581 gctttcgatt tggttttccg gcgacttctc cggtattttg gcaggtcggt atgaactgct
     5641 ctggattacc gctattctgg ctgttgtggt ttatgtgatg gcagatcaat taaccattgc
     5701 aggccttggt gaaaatatta gtaccaactt aggcattaac tacaaacaaa tgacttggct
     5761 tgccttaatt gtggtggcga tgattaccgc tattgtcgtg gtgacggttg gacagattcc
     5821 gtttatcggc ttggtcgtcc ctaatattgt ctctcgcata gcaggtgacc gattgcgtaa
     5881 aaatctgcct gcggtcgtgg tgttaggtgc gaatttagtc ctgatttgtg acattttagg
     5941 gcgagccatc aatgcccctt atgaagtgcc gatttctact atttttggga ttattgggac
     6001 agtgattttc ctctatttat tgctcaaaga gaaacgggct gaggagaagg ctcgtggtta
     6061 gatcacgctt tatcgtttta agcttaatct tattagcaag tattctgttt tatatgacct
     6121 ataatgcgaa aggtaattgg gactttatat tgcaactgcg tggcaaaaag cttattttgc
     6181 tctgtactat tgcttatacg attggtattt cgaccctgct attccaaaca ctcacacata
     6241 atcctatttt aactccaagt attttggggt tcgattcgct ctacttgcta ttgcaaacct
     6301 cgttagtatt tttatttggc ggtttaggct ttactcagtt agacccaagc tataagtttt
     6361 tctttgaaac cttgttaatg ctaggggcat caatattact atttagttca ctgaatcgaa
     6421 atcgatccga tttaacccga atgcttttaa tcggtgtcat ctttggtgtc ttatttagaa
     6481 gcctaaataa tttgttgcaa cgaatgtcga cccaacagag tttgccgttg ctcaaggctc
     6541 ttctttgcct catttaacct gactaccccc acattacttt ggattggagg ctgtatcgct
     6601 attctctctg ccatttgggt ctggttacaa cggcataaat tagatatttt gttacttggc
     6661 aaagataagg caattgggct tgggttagaa tatcatcaat tttcacgtca attactaatc
     6721 tgttgtggat tgttggtgtc tgtttcaacc gcacttgttg gcccgattct atttctaggg
     6781 ctacttgttt gtgccattgt taatgcaatt agcccgactg tttgccatag cgtgcgaata
     6841 ccaatgactt ttttaatctc tgccatcacc ttaattttag ggcaggcaat cttcgagcaa
     6901 gtgctgaaaa tgcaaggggt tctgagtgtc gttattgaat ttattggcgg tattgtcttt
     6961 atttatctca ttttaaaacg gaaaaaataa ccataaatta aggaagaaaa tgataacggt
     7021 taaaaatctt caccacaaaa tcgggaatgc cacgattctg aataatatca atttaaccat
     7081 tccaaatggt ggtattaccg ctttaatcgg agcaaatggt gcgggcaaat ccaccctgct
     7141 ctctttaatt gcacgcttgc aacctatcca acagggtgaa atccacttaa atgagctgaa
     7201 tatagccaac acagcttctc aaactatcgc tcgacaactg gctatcttga cccaagataa
     7261 tgtgattcat agccgtatta ccgtcaaaga tctgctgtta tttgggcgtt accctcatca
     7321 tcaaggcaga atcacttcgc acgataatgc cattgtagaa gaggctctgg tacgatttga
     7381 tttatcgact ttctcccacc gattcttaaa tgaattatcc ggagggcaac gccagcgggc
     7441 attaattgca atgaccttct gtcagcaaac cgatcatatc ttattagatg aaccactgaa
     7501 taatttagat atgttccatg ctcgggaatt aatgaaatta ttacgaaaat taaccgatga
     7561 actcgcctta actactataa tggtggtaca cgacatcaac attgctgctg cttacgcaga
     7621 tactattatt gcaatgaaag atggtggaat taagatgatc ggcaccccaa aagagattat
     7681 caccactgaa aatttaaaaa cagtgtttaa tcttgatgcc gaagtgttag aatgccaagg
     7741 caaaccttta gttattcatc atatttaacg tttgaagatc atggtaatta ataaaaattg
     7801 cgtcttaatt tattaatcta aacgatagaa acttatattt agtttctaat ttcttgaatt
     7861 ctcaacctct cttaactcgt gatttaattt acctaaaacg ttgaaaaatt taccgcttgc
     7921 agtcttcact ccaagcggtt gttttcattc actatctagt tcggtaatta gaatggcttt
     7981 tagttctaac tgttcttgtt ccgataaagc ttttccttga tcattactga ccacaaagaa
     8041 atcctctacc ctttcaccaa tagtcgtaat tttcgcatta attaaattta atcggagccg
     8101 gttaaaaata tagcctattt gtgccaacaa cccttctcta tccaaggtaa aaagttcaaa
     8161 ttcggtttgt tgctttgatg acggaggaag aaaacgcagc cgagttttac gcttaaatga
     8221 caaatgtttc accggttttt tggtaaattt tatgcctgtt tcagttaagc ttaacatttt
     8281 catcatcgcc tgctgaattt gcatacatct ctcatcggtt aaatcatcat caccatcacg
     8341 ctcacttaca ataaagctgt ctaacactac accattttca gtagtaataa tttgtgcatc
     8401 gtgaatgcta atgcgttttt ggctgagtaa ttgggcgatt cgagcaaaca gttgaggttg
     8461 atcttggcaa catacaaaaa tttctgtacc accacgggca tattcattac tgattaaaac
     8521 catcggcaac cggcgagttt ttacataatg cagagcgtgc cataccaact gagtcggtgt
     8581 atggtgaaga aaataacgct ccgggcaagg ttgccaaaat gcgtttaatg ctattcgctc
     8641 atcagctgaa agcacgaact tcatcagttc taatgcttgc aagcgatgct cttgtgccac
     8701 tgcttgataa ttcaaatttt gagccagttg ctgtagcgta aattgatata attgggtaaa
     8761 cagcgaggct ttccaatcat tccagaggct ctcactggtt gcacaaatat ctgcaaccgt
     8821 taaacaaagt agtgaagata aagcggtctg attttgcact ttttttgcaa attcgctgat
     8881 gatttgcgga tcgtggatat ctcgtctttg tgcggtgatc gacattgtca aatgctctgc
     8941 caccagccaa accatatcat tgatttgtgc ttgagaaaaa ccgtgtagtt ccgcaaattc
     9001 tcgcatatcc agcgcaccaa cttgagcgtg ttcgccctct ctacccttgc caatatcgtg
     9061 gaaaagagcc gcaagataga gcaacggttt ctcagaaagc gttgcaaata gctgatgaca
     9121 tagtgggaaa aacgcccgac ttggatcttc gctaaaattt tctaaattta acatgactct
     9181 gaccgtatgc tcatcgactg tataaatatg gaataggtcg aattgcatta gcccttcgat
     9241 ccccttccat tgcggtagat aagcacttaa aaaacccagt tggtgcattg gaactattgc
     9301 tcggcttatg actttcggtt gagcaaaaag ctgtacgaat ttctctcgca tttcaggcaa
     9361 aaagcacata ggctcgtgtt gttgctgtaa acacagtctc aactgacgta aggtgtcggc
     9421 attcgctatt aacgtagggt cattagtaag atgaaaaaag agatccaaca ttgttgtggg
     9481 ttgggtttta aatattttgc gttcgaccac aaacaattgc tgttcttgcc gataaaaata
     9541 ctgatcaagc ggttgttttt gtgcattttt ttgcaactcg tttacatagg cttgttcaaa
     9601 actgtttaac aataattggc tcagttgcga aatagatttt gtggcttgaa aataatctcg
     9661 catcattaat tccaccgctt gatttgcttc gccttggtag cctaatattt cactcagttg
     9721 taattgtctg tcaaaccgaa ggcgattatc gtaacgtttc agttgcaaat gaagtgcaaa
     9781 acgcatccga aaaagtaccg cttgtgctgc gatcagctcc ttatattctt ccgggtaaag
     9841 tagcccttta ttgaggagat cgacaaaaga agatacacca taatgccgta gcataatcca
     9901 agagattaaa tgcagatctc gcaatcctcc cgggctatgt ttgagatctg gctcaaggtt
     9961 atagctagta ttatgataac gtgcataacg ctcatttttt tccgccattt tcgctctaaa
    10021 aaacgcttta atatcccaga aatccggctg ataaagtgct tcttttaatc ttagccaaag
    10081 cgatttatta cccaataaaa atcgcccttc caacatatta gtggcaaccg aaatttctgc
    10141 tttcccaatc tgaatacatt cttcgagcgt acgcacactg gtgccaagtt gcagtttgct
    10201 gtcccaaagc aaggcaaata gttcgtttaa acgctgctga atagcctctt ctagcggttt
    10261 ttcagttaac actaagatat ccagatccga aagcggaaac atctcctcac gtccgtaccc
    10321 ccctaccgct aatagggtaa tatgttcata ttgagcgagt ccaaaatctt gccaaagtgc
    10381 ttgcagtagt tggtcataaa attggctacg ttgtgcaagt aagctgagta cattttcgga
    10441 ttgaaatgct tgccgctgtt gctccgtaaa tgctgataaa agcgttttta attcgttgct
    10501 gtttttcatc ataatctctt cctaaactgg caaaataata ggtcatttat tttcgtttgc
    10561 ctatatttat tttggctaaa atgcttataa tgcctttatg tttttcatct aaaaggatag
    10621 tttatgacac ttgctgttgc cgctattatc ggtggcttaa ttatattagt ttggagtgcg
    10681 gatcgttttg tggaaggggc agcctctacg gctcgccatt ttggtatgac accattgtta
    10741 atcggtattg tggtcattgg ttttggtaca tctgcaccgg agatgctcgt atctgcatct
    10801 tctgcattaa gcggatcgcc gggtatcgct ctcggtaatg cctacggttc taacattacc
    10861 aatattgcgc tgattttagg tttaaccgca ataattaaac cactatcagt taattccgat
    10921 gtgttaaaaa aagagttgcc gattttactg gctgtcaccc tgctttctgc ttatttggtt
    10981 tatgatgcaa acgtcactca acttgatgcg attattttac ttgctgtgtt ttttgtatat
    11041 atggcgtgga caattattac cgcaatgaaa agtaaaaatg atgcattaag cttagatgtt
    11101 gatgcagaat taaccaatag tgctaagatg ggattaggaa aatccattct ttggctaatt
    11161 attggtttag tatcgctagt aattagttcc caattcttag tctggggagc agttgaagtg
    11221 gctaaatttt ttggtgtgag tgatttggta atcgggctta ctattgtggc ggtaggcacc
    11281 tcactacctg aattagcctc ttctattgca gctgctcgta aaggagaagt ggatttagct
    11341 ttaggtaaca ttatcggttc taacttattt aatacgttag ccgtggtggg gattgccggt
    11401 gctatagaac caatgcaagt ttcagcggaa gtgttttctc gcgatgtctt gatgatgtcg
    11461 gctctcacct tcttattatt cattttcggg atcaacctct atcgtcggac agaaggtggc
    11521 agaattaatc ggttagaggg cttattactc tttgccgctt atgtaggcta taatttctat
    11581 ttgtttaaaa ctgcgggcta gtgccaaatt caaagagcca caaacgtggc tctttaattt
    11641 atattcttaa gcttgaatta agcattacgt tgttcaaata ccttcataaa ttcaatgagt
    11701 gcttttaccc catcaatcgg cattgcgtta taaattgagg cacgcattcc acctaatact
    11761 ttatggcctt tcaatgcctg taaaccacaa gcggtcgctt ctgccacaaa ttttgcattt
    11821 agctcgtcat tacccgtggt aaaggttaca ttcattaagg aacggttttc gtgtgctacc
    11881 gtattgtaat agaatgttga actatccaaa tactcataaa gcaatgtagc tttagcaaga
    11941 ttacgttctt cagtagcttt caaaccaccc tctgccagta aatgttggaa cactaaagaa
    12001 cataaatacc aagcaaaagt tggcggggta ttaatcatcg aatcagcatc tcgctgagtt
    12061 gcataattcc aaatagatgg ggtatctttg cgtgcattgc caattaaatc atcacgaata
    12121 atcacaatcg taatgccagc aggccctaga tttttttgcg ctccggcata aattactcca
    12181 aatttgttga tatcaatccc tcgggctaag atattagacg acatatctgc cactaacggg
    12241 gtatttccga cattcggaat atcgaaaatt tctaccccac tgatggtttc attggtgcaa
    12301 taatggatat aatcatattg ctctgcaata tcgctgaaat ctaaacgact cactttaagt
    12361 tgcggttcag tctctaaaat attgatttca tcaatttccg caaagttacg tgcttctttt
    12421 gctgctgttg ccgaccaatg ccctgaatta aggtaaagcg ctttgccttt tttaccgatt
    12481 aaattcattg gaatggctgc aaattgcccc cttgcaccac cttgaagaaa tagaatacga
    12541 taattgtccg gcacattata cagcttgcgt aaatctgctt cagattgtgc cgccagctcc
    12601 ataaatagct ttccacggtg gctgacttcc atcactgatg tgccttggtc tagccaattt
    12661 aataattctt gttgcgcttt ttcgagtact tttttcggca tcattgccgg gccggcactg
    12721 aagttatata tctctgtcat ttttcacctc gtatagtaat aatattgatt ctattctatc
    12781 tgaaaaaaag cgtaatggta gaataaaaac agaaaaatta ttttagcaaa cttgcataaa
    12841 atactctttt taaaagcata atactctttc gtaacatcac ccaaataagg aataagcgat
    12901 ataaaaaaac aagcataaat ttcttccatt ttttgcaaaa aaattattaa aacaaaccgc
    12961 ttgtcttaaa aacataattt aatttcgtga tctttactaa tacatcaagt aaaatacgcc
    13021 ggactttaca gtaagaagtc attgtcaata ttatcactat ggagatattt tatggcattg
    13081 aataacattt taggtttatt cgcccagtcc ccacttaaac cgttacaaaa acactcaaat
    13141 aaagtgactg aatgtagcga gttattagaa tctttttttg aagcgacttt tgaacatgat
    13201 tgggaaaaag cagctgaagt gcgcggtaaa attgttgatt tagaacgccg cgcagatgcc
    13261 cttaaacgtg aaatccgctt aaaactgcct cgtggtttat ttatgccagt tgaacgcggt
    13321 gatttattag aactagtcac acaattagat aagttagcaa actattcaag agatatttcc
    13381 ggtcgcatta ttggtcgtaa attaatcatt cctaccgaaa tgcaaccact tttcaaaaaa
    13441 ttcctttctc gtagtattga tgctagccgt caggtacgca aagttttgga tgaaatggat
    13501 cagttattag aaactggttt tagagggcga gagcttgatt tcgtcaataa aatgattctt
    13561 gaacttgacc aaattgaaga tgataccgac caatatcaaa ttacattacg tcatacactt
    13621 cttgagttag aaaaaaacct gaaccctatt gatgtgatgt ttttatacaa atgtattgaa
    13681 agaatcagcg ttctagctga ccaagcccag cgaattggtt ctcgtattga acttatgctg
    13741 gcgaagtcat aggagaaaat taaatggaat tactcaatca atatggctca atactggtga
    13801 ttattactgc tattgtaggg tttatgatgg ctttcggtat tggtgctaat gatgtttcaa
    13861 atgccatggg aacatccgtc ggctctggaa caattacgat taaacaagct attttaattg
    13921 ctatggtatt tgaatttgct ggtgcttatc tggcaggcgg tgaagtcgca gatacaatta
    13981 aaagtggcat tattgatccg gcacaattcg ccaatagccc tgatatcctg gtacttggaa
    14041 tgatggcatc tctctgtgct gccggaatgt ggctaattat tgcaactaaa atgggttggc
    14101 cggtttcagc aactcacaca atcattggtg ccgttattgg ttttgcatta atcactattg
    14161 gttcagatgc aattcaatgg gatgcattag gtggaattgt tgggagttgg tttgtgaccc
    14221 ctattcttgc ggggatcgta gcatattcga tctttattaa ctcacaaaaa ctgatcttta
    14281 accgctcaaa cccattcaaa caagcgaaaa agtatggccc gatgtacatg ggaattacta
    14341 tttttatttt agttattgta accgtgtcaa aaggcttaaa gcacgtagga ttacatctag
    14401 atacagctga aacattggga atttcattcg cgcttgcctt acttgctttt atcattggat
    14461 atttttattt ccgcagtaaa agctttgcaa tgaaagctcg tgcagaagag aaaggcttcg
    14521 ctggcgttga gaaaattttt agtattttaa tgcttattac ggcctgtgct atggcttttg
    14581 ctcatggctc taatgatgtt gctaatgcta ttgggcctct agctgctgtt gaatctattg
    14641 taagaagtgg tggaatgatt gaaggtaaaa cgactttagc cccttggatt ctcccactag
    14701 gcgccttagg tatgatgatt ggtttagcta ttatgggcaa gaatgtaatg gctacagtag
    14761 gtactggtat taccgacctt actccaagcc gtggctttgc tgctcaattt gcctgcgccg
    14821 tcacggttgt cattgcatca ggtactggtt taccaatatc aacaacccaa acgcttgtag
    14881 gagcagtatt aggtgtggga ttcgcccgtg gtattgctgc acttaactta ggcgttattc
    14941 gtaatattgt tatatcatgg gtaattacct tgcctgtagg tgctgtgctt tcaattatta
    15001 tctattatat tttaagcgct attttctatt aatttttcaa aaagaataca ggcaactgta
    15061 ttcttcctag ctttagagga atatatatga agaaattatc atcagctctt ctgtcttgtt
    15121 ttttactcgg cctatctagc cctgctttaa cggcagacac ttacattact gaaaatctga
    15181 gtacatttat gcgcaaaggt gctggtgatc aattccgcat ttcaggcgct attcaagcag
    15241 gtgaaaaagt cacagtatta gatcgtaaag agcgctacag tctgattcga gatagtcgta
    15301 accgtgaagg ttgggtactt aattcagact taagcgatac tgctagtcca aaagagctga
    15361 ttcctcaatt aaaacaacag gttcaagatt taaccaatcg cctgagcaaa atcgataccg
    15421 aatggcaaca acgtaccgca gaaatgcaac gtagaacgca agattcagtg cagaaaagca
    15481 gtgatttggt tgaggaaaat gcacaactaa aacgtgaact ggaaatcctg aaaaacaaaa
    15541 atcgtgattt agaaacaatg cacgattccg agaaacgtga aatcgtgatt cagtggttca
    15601 tctatggtgg tgctgtgtta ggcgcaggtt tactacttgg gttactcgtg cctttcctga
    15661 tccctcgccg cagacgtaac aacagcggtt gggcttagtc tgccacaata aaacgtaaaa
    15721 aggattcagt tttctgaatc cttttttact tttatctgac cgataatttt tccaactccc
    15781 taaagtaagt cgggaacgtt ttagcggtac aatttggatc taagatcgtc acttctgtat
    15841 tcgataacgc aattaatgaa aaacacattg ccatacggtg atcgttatag gtttcaattt
    15901 cagcgtgctg gaagttttct aacgcaagcg gttgaatccg aataaaatct tccccttctt
    15961 ctacctctgc cccgacttta cgcaattcgg ttgccattgc tgtcaagcgg tcggtttctt
    16021 ttacccgcca gttataaata ttgcggataa ctgtttctcc ttcggcaaat aaagcggttg
    16081 ttgcaatcgt cattgccgca tcaggaatat gattcatatc catatctacg ccttttagcg
    16141 gggattgctc ggcttgaata aaatcctctc cccaagtgat ttttgccccc attttttcca
    16201 acacatcggc aaacaagcgg tcgccttgga tcgatttttt accaatgccc gttactttta
    16261 ccttgccttt aatcgcaccg gaggctaaga aataagaggc agaagaggca tctccctcca
    16321 ccaaataatt accttgtgga gcaacatagc cttgtttacc tttaactaaa aaggttttgt
    16381 aatctcgatt ttcaaccgta ataccaaaat cgttcatcat cgaaagggta atatcaatat
    16441 aaggttttga taccagatca ccgataatct caatttccat atcgccttcc gctaatgggg
    16501 cagacatcag caatgcggtt agaaattggc tggaaatcga gccgtcaatt tgcacttttc
    16561 cgccctgcaa accgctattg ctaattgcca acggtggata gccttcattt tctaaatact
    16621 gtacctctgc ccctacttgg cgtaaagcat cgactaagtg tttaatcggg cgttctttca
    16681 ttcttggttc accggtaaga atgatttggg atttttcctc accttttaaa cacaatgctg
    16741 ctgcaagtgg tcgcattgcc gtgcctgcat tgccgagaaa cagtgataag ccgttttgaa
    16801 ccttaaaagc tccaccaatc ccttcaacta cacagacggt tttatcgtcc gatagctcat
    16861 atttcacgcc taacgctttt aaggcattga gcatatgtcg aatatcatca ctatctaata
    16921 aattggtcac ttgagtcgta ccggtggcta aggcggctaa taataaggct cggttagaca
    16981 ggcttttaga accaggtaaa ttgatctcgc cttctactcg ggaaatcggg gttaaagtta
    17041 gtttttccat ttttctcttt aaatttgtaa aattttcata aaaggtaacc gcttgttaag
    17101 ctaacacttt caataaggca gtaaaaaatc tctcgttttc ttgcggtaaa ccgatactaa
    17161 tgcgtaaatg attcggcatt ccataacctg ctatcgagcg aacaatcacg ccttcacgca
    17221 gtaatgcctc ataaatcgga gcggcaggac gtttgaaatc aatagtaata aaattgccct
    17281 tagaagggat atattccaag ccgtttgctt ggcagaaagc ctcatagcga gccatttcca
    17341 agcggttatt ttctgccact tttttgacaa attcatcatc attcattacc gcaatcgctg
    17401 aagctaaggc aagactattg cagttaaacg gctggcgaac acgatttaat aaatccgcaa
    17461 tttcagggtt tgaaaccgca taaccaatcc gaagcccggc taagccgtaa gccttagaga
    17521 gtgaacgtga cacaattaaa ttcgggtatt ttgccaataa gccaaacgaa tccacccgtt
    17581 cttgaggcgc agtaaactcg gtataagctt cgtccagcac cacgattaca tttgccggca
    17641 ctttagctaa aaagccctca atttccgctt gggttaaaaa attaccggtc ggattattcg
    17701 ggttggcaat aaaaattaat ttagtttttt cggtaattgc agccaaaaag gcatctaaat
    17761 tgtgtcccca atttttagcc agaatttcac gggcaacggc attaatcgct ttcgtcacca
    17821 acggatacac aataaacgca tactgagaat agataatttc atcttgctca ccggcgaagg
    17881 tgtgggcaaa cagctctaat aaatcgtttg agccattgcc taaggtgatt tgattggctt
    17941 gtacgccaaa tttttgggca atagtggttt ttaattcaaa gccgtttgaa tccggatagc
    18001 gggttaaatc gtcaagctga ttcagaatcg ccttttttgc actttcagga aaaccaaatg
    18061 ggttttcgtt cgaggctaat ttaatgatat tttgaatccc taattcacgc tctagctcct
    18121 caatcggctt tcctgcttgg taaggcgaaa gggatttcac gccctcattt gcgatgttga
    18181 taaattgcat aataacctct gattattctt ataaaatata agttcggatt gtagtaaaga
    18241 atga
//
LOCUS       DANLXO010000050        18151 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.050, whole genome shotgun sequence.
ACCESSION   DANLXO010000050 DANLXO010000000
VERSION     DANLXO010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18151
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.050"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            127..1197
                     /gene="dhaK"
                     /locus_tag="PXD69_001414"
     CDS             127..1197
                     /gene="dhaK"
                     /locus_tag="PXD69_001414"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDL6283612.1"
                     /translation="MKKLINSIETVLDEQLSGFVKAHSDLTLNTEPVYIYRTTPSNQP
                     KVALISGGGSGHEPMHAGFIGKGMLDGACPGAIFTSPTPDQMFECGLAVDRGEGVLLI
                     IKNYTGDVLNFETATELLADSGVKVATVLVDDDVAVKDSLYTAGRRGVANTVLIEKLL
                     GAAADKGYNLSELAKLGHQLNNNGHSIGIALSACTVPAAGKPSFTLAENEMEFGVGIH
                     GEPGIERRPFENLDSTVKQMFETLIAHGDYQRKIRHWNTQTQQWDEIEESKVALKKGD
                     RVIALVNNLGAVPLSELYAVYDALEKECQTFGLSIERSLVGSYCTSLDMQGISITLLK
                     VDEDILKLWDAPVNTPAMRWGE"
     gene            1218..1844
                     /gene="dhaL"
                     /locus_tag="PXD69_001415"
     CDS             1218..1844
                     /gene="dhaL"
                     /locus_tag="PXD69_001415"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HDL6283613.1"
                     /translation="MTISKQQILKWLENCQQVMTEKRDYLTELDTVIGDGDHGLNMQR
                     GFSKALEKAHTVQDKDIGTLLKTVGMTLLSQVGGASGPLYGSFFIKAAQGATGKEQLS
                     FNELLALLQQGAEAIVQRGHAQVGDKTMCDLWLPLLEDLAQADSTQPIAQILLQAVEK
                     AENFANQTAPLMAKKGRASYLGERSIGHKDPGATSSYYIFKALAEALQ"
     gene            1854..2261
                     /gene="dhaM"
                     /locus_tag="PXD69_001416"
     CDS             1854..2261
                     /gene="dhaM"
                     /locus_tag="PXD69_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDL6283614.1"
                     /translation="MVNLVIVSHSAKLAEGVGEILAQMAQGGCKIALAGGIEDTSNPI
                     GTDAVKIMQAIESVFSPDGVIVFVDLGSAILSTQTAIDLLEPELAEKVIISYAPLVEG
                     AFAAVVAASAGDSLEAVLNEANEAAALKQEQAN"
     gene            complement(2301..3146)
                     /locus_tag="PXD69_001417"
     CDS             complement(2301..3146)
                     /locus_tag="PXD69_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone YbbN"
                     /protein_id="HDL6283615.1"
                     /translation="MDYFVNVNEQNFSEVWAAAAQVPTVFHFISPREVASLEMDALLR
                     RISDENPNQFLLATVNCDEQQALAAQFRIQQIPTLYLFAGGQPIDAIQGAVSEQELRI
                     RLANILPKEEELKFQQALELLQDQRYTEALPLLKSAWEMTDKKNSDFALLYAETYIAM
                     KSVEEAREILKAIPIQDRDSRWHGLQAQIELLEQASESPELQQLQADYANSKTPEIAI
                     KLANQLHQAHKNEEALTLLFDWLKSDLNVANGEVKSQFLAILSALGTDPIVPKFRRQL
                     YSLLY"
     gene            complement(3190..3516)
                     /gene="glpE"
                     /locus_tag="PXD69_001418"
     CDS             complement(3190..3516)
                     /gene="glpE"
                     /locus_tag="PXD69_001418"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HDL6283616.1"
                     /translation="METTFKEISPQQAWELIENEGAVLADVRDARRYVYSHPQDAFHL
                     TNQSYGKFLDEVDYDEPVVVICYHGVSSQSTAQFLIEQGFENVYSVKGGFEAWERNGL
                     PIETSY"
     gene            3667..4125
                     /gene="exbB"
                     /locus_tag="PXD69_001419"
     CDS             3667..4125
                     /gene="exbB"
                     /locus_tag="PXD69_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDL6283617.1"
                     /translation="MEQLFQFLEHHTDFVILGLLGLLSVICLWKAIERIMFYSKVDIS
                     KYDTLEELDIDLTHNLTTISTIGSNAPYIGLLGTVVGILLTFYHLGQSGGDIDAASIM
                     VNLSLALKATAVGILVAIIAMVFYNGFGRKVEENKLKWLALQSKKPHQAV"
     gene            4162..4599
                     /gene="exbD"
                     /locus_tag="PXD69_001420"
     CDS             4162..4599
                     /gene="exbD"
                     /locus_tag="PXD69_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDL6283618.1"
                     /translation="MKKFDEINIIPFIDIMLVLLAIVLVTASFISQGKIQVNVPKAST
                     TQPMKADDLAKLLTITENNEFFFNDQAITKEQLIAEVATWDKSQKVSLKVDGAVAFEK
                     FVELTDILSANEIKNVAIITKKETAPAPSSTPGSPAQVPAVAP"
     gene            4615..5526
                     /locus_tag="PXD69_001421"
     CDS             4615..5526
                     /locus_tag="PXD69_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDL6283619.1"
                     /translation="MKKKHSRIGLLASLAIHTALIGGTFAWLHNHKVEKIAEQNSLSM
                     EMVAALLEQPQVAVAPDPITEEVKEIEPEKAEVPPEPKLTPEPTPEPEAIPDPTLNPK
                     KEKPKEEKRKERHHHKHKHRHKEKREELQEQEKPKDKPKERPKHHHKHIKALERGPEI
                     KQGIVAKAIPNAAEGEKVVAGVVGGQKNGSPNSTSTTGSANTGASSGNASELAAYKVA
                     LQRALQRKANNSYPQREKMMRKTGTVTIKFTITSSGSITNVSVLNSSGNSNLDNAAVR
                     SAEGLSMPPPPAGFPPTVTVPVRFALE"
     gene            complement(5595..6476)
                     /gene="cysZ"
                     /locus_tag="PXD69_001422"
     CDS             complement(5595..6476)
                     /gene="cysZ"
                     /locus_tag="PXD69_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HDL6283620.1"
                     /translation="MSSVFSEPQNQVGLGFHYFIYGWRLLLQRQFLPFVIFPILINTV
                     LMVGLIWGFFANIGGLLDMLLPSWLEWLSFVLIPLIFLMILVGFYFAFTTLANFVAAP
                     FNALLAEKVELQLTGEPLGDMSFGAMLKDVPRMLKREWQKMMYSIPRLIALFVLGFLP
                     VVGQTVAPVLTFIFGAWLIAIQYCDYPFDNHKISFQRMRNALSQSRTLNFTFGALVSL
                     FTMIPFVNLVVMPVAVCGATALWVKEYRNFFLNNQTGEFSKADYTFTKVNSTSLSTET
                     RTGEVSPNVRNGDIRKQ"
     gene            6588..7490
                     /gene="zipA"
                     /locus_tag="PXD69_001423"
     CDS             6588..7490
                     /gene="zipA"
                     /locus_tag="PXD69_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HDL6283621.1"
                     /translation="MELHIIFFILAGLLIAVLIGFSLWSARREKSNIFSNTFSTRPIA
                     VPPQNNKMSNSIPTSLQPQNEDYQAMSVPEENPQQIQQEVESSLQNIKISLPGGNPQQ
                     QPEQIQPIQSVAEPTVSTYGQKISNQQHIQYNTPDFANPMVNTVVEETPQAVAIEPQE
                     TQSAEEENPFVTLYLYAPQNEAFRGDFVVHYLEEVGLRFGEHQIFHRHQHIDDSLSPI
                     IFSAANLMNPGTFDLNNISNFATAGLVLFMQLPTEGNDVANMKLLISNAEHLAASLGG
                     FLYDDNQQPFGEESRQRYMQRVMH"
     gene            7555..9612
                     /gene="ligA"
                     /locus_tag="PXD69_001424"
     CDS             7555..9612
                     /gene="ligA"
                     /locus_tag="PXD69_001424"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDL6283622.1"
                     /translation="MSLFNQTSLFEENATPELVEKIETIRQTLRQYEYEYHVLDNPSV
                     PDAEYDRLMNELKNLEWQHPELISADSPTQRVGAKPLAGFAQVTHEIPMLSLDNAFSD
                     EDLDGFLRRMESYITASPSQLEFCCEPKLDGLAVSILYENGILTRAATRGDGTTGEEI
                     TANIRTIRNIPLKLNTTNPPARLEVRGEVFMPQSGFNELNEKALAKGEKTFANPRNAA
                     AGSLRQLDPKITRQRPLVLNAYGIGVYESDDELPATHFERLQWLKSLGIPVNNEIRLV
                     QGKAALLAYYAEIQAKRPTLGYDIDGTVLKVNDIALQEQLGFISRSSRWAIAYKFPAQ
                     EEMTILKEVDFQVGRTGAITPVAKLEPVFVAGVTVSNATLHNGDEIERLGIVIGDTVI
                     IRRAGDVIPQITGVMLERRPENAKKIEFPTACPICHSAVTRVEGEAVARCTGGLFCEA
                     QRKEALKHFVSRKAMDIDGVGEKLIEQLMARELIETPADLFKLDHTTLMRLERMGEKS
                     AQNALNSIEKAKNTTLPRFLFSLGIREVGEATALNLANHFGSLEAIRQATFEQLKEVQ
                     DVGEVVANRIVSFWQEPHNVEVVEDLIAQGVRWENVVKAEIVDNPLKDKNVVLTGTLT
                     QLTRDEAKALLQSLGCKVSGSVSSKTDYLIAGEKAGSKLAKAQELGIQILSEQQFIEL
                     TQH"
     gene            complement(9675..10943)
                     /locus_tag="PXD69_001425"
     CDS             complement(9675..10943)
                     /locus_tag="PXD69_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL6283623.1"
                     /translation="MTQQIEHSTWQSKFAAMGPGILMASAAVGGSHIIASTQSGAIYG
                     WQLAIIILLANLFKYPFFRFGVQYTLASGKTLLEGYKEKGKFYLIIFFILNVFAAMIN
                     TAAVAIVSAAILKFIFSALGIPLDLSIPMAGTIVIVVTWGILLLGQYKFLDTLSKWIM
                     IALTISTVSAVIIAALKGGVEIAPDFVEPSPWNLAALVFIVALMGWMPAPIEISAINS
                     MWVIAKKRLSKVNYEDGIFDFNVGYIGTAILAIVFLALGALVQYGSGEKVEQAGVAYI
                     AQLIKMYAFAIGDWSKLLIAFIAFMCMFGTTITVIDGYSRANAEALRLISGRKQHSQT
                     ELSIWMTVTALIGILIISQFMSDVAKMLQFAMISSFVSTPVFAWLNFSLVLKGEHRAK
                     GWLFWLAVIGLIYLTSFTLLFLAQQFKLIG"
     gene            complement(11267..11977)
                     /locus_tag="PXD69_001426"
     CDS             complement(11267..11977)
                     /locus_tag="PXD69_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HDL6283624.1"
                     /translation="MFMVIQLALYNLQTYEVGRNATTIFMTTDKVYTGGSTWTYLFAD
                     ADNKITSVREMNGFGDVEKEFKCGEYKEAVTIASKEDLAKRKTQPRLWSSIYMSPEQN
                     MMWVTDNTSKNLENAKQDAFKQCEKNGGRNCQMILSFSNMCLAFAQGYKDGQGFEDFG
                     YGIVSSLAEENALENCNQKGGSSCLLSAPAVCAIPCDILSNNKCMYDQPQIIIPGKNN
                     NQPINPPANGNGEHWLSN"
     gene            complement(11946..12092)
                     /locus_tag="PXD69_001427"
     CDS             complement(11946..12092)
                     /locus_tag="PXD69_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283625.1"
                     /translation="MIKPLDSVYWRGKDVSEFFARKRLPDTAVQCVKDNELSYVYGYS
                     TSFV"
     gene            complement(12210..13427)
                     /gene="fabB"
                     /locus_tag="PXD69_001428"
     CDS             complement(12210..13427)
                     /gene="fabB"
                     /locus_tag="PXD69_001428"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HDL6283626.1"
                     /translation="MKRVVITGLGVISSIGNNKEEVLESLKAGKSGIEFVPEFAEVGM
                     RSQVAGTIKLNPAELIDRKIYRFMGDAAAYAYLSMKEAIEDSGLTEEQVSNDRTGLVI
                     GAGTGSAHSQLVACDAVRGPRGVKAVGPYAVTKTMASSVSACLATPYKIRGVNYSISS
                     ACATSAHCIGHAMELIQLGKQDVVFAGGAEELSWECATEFDAMGAVSTKYNETPTKAS
                     RAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGA
                     ERCMRQAMATVNGEIEYINVHGTSTPVGDVKELGAIRNVFGDKTPAISSTKSMTGHSL
                     GAAGAHEAIYSLLMLDNNFIAPSINIETLDEQAQGMNIVTERQDKALTTVMSNSFGFG
                     GTNACLVFQRYSK"
     gene            13688..16225
                     /locus_tag="PXD69_001429"
     CDS             13688..16225
                     /locus_tag="PXD69_001429"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HDL6283627.1"
                     /translation="MKTLTLTANKITAVEGAAIGANQGSFAQKLNSTKARIDQLNAYR
                     IERAINANNHHFMHVFSLIPLLIHLNHPVLPAYVENAPQGIWHFQLSDYQKQFLVSYR
                     FDEAISADHLGPHPSFDALYSMGSTGTITQTSCSDLDLWLCYPNHFTIEQYKLMELKI
                     NKLQEWAKTFQIDINIYLMNPEQFKSQTYNSSVTDEHSGSAQHFFLLDEFYRSAILLA
                     GKRLLWLHLHKNEYQNVHNNPEIDLTEWIDFGDFSSLSTSEFFGASLWQLYKGINNPY
                     KSAIKILLLECYAHTYPKTKLISKEFKKKLLSDNALEYHFDPYLAMLELVTEHLRSRK
                     EWVKLDRLRVCFYAKAVEGEINNNWRSRDLDELVNQWSWSEKQIQLLQNRQHWKIKQV
                     MNHENMLIDHLLQSYRNLIHFARKFHINPSIMTNDTDILMRKLYSVFEALSGKISLIN
                     HKISSNLAEKAITFIEAKVGSALQPGWYLVNQAPKSRYDSENRYVHYNKSPIKLIAWG
                     YFNGIINAATNLHTVSPNLDIEKLRQFITDLRLSFPIQAPEVTNDDMHHPNEIRNLVI
                     ALNLVQDPTEHIDELPKKVYPSDLFNFGKAQKTLVGSVSIIYRNVWNEIRTQHFDGED
                     AILKALKLVSNRIYQGNSSPQSVNVFCYSKYLRSELRDFVADLVHKCITIQTGCLLQE
                     NEFSTLKVAGKTWQFLFHKKTFSIKQIDEQQAVENLNSFAKTKQNAKSENEKKKEFPQ
                     QISEFASEGFLQFFFEDNVDNSFNVYVVDERNNVESYYNCFGNKEEKIRKINKLQNEK
                     QLKTETPASFGSFNHPQFYQLISPNGELCIVPFQSRQHLDYLAQKHH"
     gene            16256..18124
                     /locus_tag="PXD69_001430"
     CDS             16256..18124
                     /locus_tag="PXD69_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDL6283628.1"
                     /translation="MSGLVSPELIKTVALLATSVTIVPLFKRLGLGSVLGYLVAGCLI
                     GPSGIGLFQDPAAVVHMAELGVVMFLFIIGLEMHPELLWAMRKAIFGRGFLQVAICGT
                     LLTLAGIYLLGFSKEVAFIAGMGFTLSSTAIVMQVLEDKGISSTPKGQRIVATLLFED
                     LAIVPLLASVAFLAPNQVDAESSTNWSAIGLSLVAVLILVASGKWLMNPIFRVISKAK
                     VREMMTAAALLVVLGSALLMEISGLSMAMGAFLAGVMLSESSFRHQLEADIEPFRGLL
                     LGLFFMGVGMSLDLSLVLNNWLWLLVIVAVYVIGKGLGIFIAASITRLTLNESIVRTT
                     IMAHGGEFAFVLFSAAATAGILTPDTHATLTAAVIVSMLLSPLLILIKQGVRKKKAKN
                     ESTNMTGVELPEDLEANVLVIGFGRFNQIVCQALLAKGLSVSVIDSNTDHIRAAARFG
                     FKLYYGDGARLDVLRASGIANANCVIVGVGNPERTEKIVELIKSEYPLVPVFARTYDR
                     QSAVDLVKKHHVDYHIRETFESALALSQAAIERLGSSEEEAKQIISYVRRLDAERFNE
                     ELLHGFSAEVIRKYWVPTPWVNPQHEGSALNEETADILEELGETVEVIKVDITDKN"
BASE COUNT         5748 a         3741 c         3503 g         5159 t
ORIGIN      
        1 aaatttcagt tcaactctat tttcgttttc gctcaacttt tttcaatttt gtgacaaagt
       61 taacagaaat ccgactgtgt ttcttgtaaa ttgtgacagt ctaattcatt taaaaggggc
      121 aaaaagatga aaaaattaat taattcaata gaaaccgtct tagatgagca actttctggt
      181 tttgtgaaag cacattctga tttaacactt aacacagaac ctgtctatat ttaccgcaca
      241 acgccaagta atcaacctaa agtagccctt atttccggtg gtgggagtgg gcacgagcca
      301 atgcacgccg gttttatcgg taaaggaatg ttagacggag cttgccccgg agcaatcttt
      361 acatctccaa cgccggatca aatgtttgaa tgcggtttag cggttgatcg tggcgagggt
      421 gtattgctaa ttattaaaaa ctataccggt gatgtgctga attttgaaac agccaccgag
      481 ctacttgcag atagcggtgt aaaagtcgca accgtgttgg ttgatgatga tgtggcagtc
      541 aaagacagtt tatatactgc cggccgccgc ggtgttgcaa atacagtatt aattgaaaag
      601 ctgttaggag ctgcagcgga taaaggctat aacttatccg aattagccaa attagggcat
      661 cagttaaaca ataacgggca ttctatcgga attgccttat ctgcttgtac tgtgccggct
      721 gccggtaagc catcatttac tttagctgaa aatgagatgg aatttggggt aggtattcac
      781 ggagaaccgg gcattgaacg tcgccccttt gaaaatctgg atagtaccgt gaaacaaatg
      841 tttgagacct taattgctca cggcgattat caacgtaaaa ttcgccattg gaatacacaa
      901 acccaacaat gggacgaaat cgaagaaagc aaagtggcat tgaaaaaagg tgatcgtgtt
      961 attgctttag ttaataactt aggagcagtg ccactatccg aactttatgc tgtttatgat
     1021 gcgttagaaa aagagtgcca aactttcggc ttaagcattg aacgcagtct tgttggatca
     1081 tattgcacct cgctggacat gcaaggtatc tctatcacat tactgaaagt tgatgaggat
     1141 attctcaaac tatgggatgc tccggtaaat acaccggcaa tgcgttgggg tgaataatta
     1201 gattgaaagg ataagttatg acaatatcaa aacaacagat cttaaaatgg cttgaaaatt
     1261 gccaacaggt aatgactgaa aaacgggatt atttaaccga attggatacc gttattggcg
     1321 atggcgatca cggtttaaat atgcagcgtg gatttagtaa agcacttgaa aaagcccata
     1381 ccgtgcaaga taaagatatc ggcaccctgc ttaaaaccgt tggaatgaca ttattatcgc
     1441 aagtaggggg agcgagcggc cctctctatg gttcattttt tattaaagcg gctcaaggtg
     1501 ctacaggcaa agagcaactg agctttaacg agttactggc acttctacag caaggagcag
     1561 aagctatcgt acaacgtgga cacgcacaag ttggcgataa aacgatgtgt gatttatggc
     1621 tgccattact cgaagactta gctcaagccg atagcactca accaattgct caaatcttat
     1681 tacaagcggt cgaaaaagca gaaaattttg caaatcaaac cgctccatta atggcgaaaa
     1741 aagggcgtgc cagttacttg ggcgaacgca gtatcgggca taaagatccg ggagcaacgt
     1801 ccagctacta tatttttaaa gccttagctg aagcattaca gtaggagggg taaatggtta
     1861 atttagtgat tgtttcacat agtgctaaac tggcggaagg cgtgggggaa attttggctc
     1921 aaatggcaca ggggggctgt aaaatcgccc ttgccggcgg cattgaggat acctcaaatc
     1981 ctatcggcac tgatgcggta aaaataatgc aagcgattga atcggtattt agcccagacg
     2041 gtgtgattgt gtttgtcgat ttaggcagtg caattttaag tacccaaacc gccatagatt
     2101 tactggagcc ggaacttgcc gaaaaagtga tcattagcta cgctccttta gttgaaggtg
     2161 cttttgctgc tgtagttgca gcctctgccg gcgatagttt agaagcggta ttaaatgaag
     2221 cgaacgaagc cgctgctctt aagcaggaac aagccaatta gtaaaaatgc cgtatcgaaa
     2281 aatacggcat tttagtttta ttagtacaat agtgaataaa gctgtcttct aaatttcggc
     2341 acaatcgggt ctgtacccag tgcagataag attgccagaa attggctttt tacctcgccg
     2401 ttcgctacat ttaaatccga ttttaaccaa tcaaaaagta acgtgagtgc ttcttcattt
     2461 ttatgagctt ggtgtagctg atttgccaat ttaatcgcaa tttcaggggt tttgctgttc
     2521 gcataatccg cttgaagctg ttgtaattcg ggcgattcgc tggcttgttc caataattcg
     2581 atttgggctt gcaaaccgtg ccaacggctg tctctgtctt gaatcgggat cgctttaagg
     2641 atttcacgag cctcttccac gcttttcatt gcaatgtaag tttcggcata gagcaaagcg
     2701 aaatcgctgt ttttcttatc ggtcatttcc cacgctgatt tcagcagcgg caaggcttcg
     2761 gtataacgct gatcttgcaa taattccaag gcttgttgaa atttcagctc ttcctctttc
     2821 ggtaaaatat ttgccaaccg aatccgtaat tcctgctcac ttactgcacc ttgaattgca
     2881 tcaatcggct gaccgccggc aaacaaatag agcgttggaa tttgttgaat gcgaaattga
     2941 gcagccaatg cttgttgctc atcacaattt accgtcgcca ataaaaattg gttagggttt
     3001 tcatccgaaa tacgacgtag taaggcatcc atttccaatg aagccacttc ccttggcgaa
     3061 ataaaatgaa acaccgtcgg cacttgtgcc gctgctgccc atacttcact aaaattctgc
     3121 tcgtttacat ttacaaagta gtccatacaa aaccttctta agctaaaaat tactttttat
     3181 attgtagcat taataagaag tttcaatagg tagcccgttt ctctcccacg cttcaaaacc
     3241 accttttaca ctataaacat tctcaaaccc ttgttcgatt aaaaactgtg ctgtactttg
     3301 gctactcact ccgtgatagc aaatcacaac caccggttcg tcataatcga cctcgtctaa
     3361 aaacttacca taactctggt tggttaaatg aaacgcatcc tgtgggtggc tgtaaacata
     3421 acggcgggca tcacgcacat cggcaagcac cgcaccttcg ttttcgatta attcccaagc
     3481 ctgttgcggg ctaatttctt taaatgtagt ttccataatc actttccctc aaaaaacgtg
     3541 caactatacc ataaaattct aaaaagaatg gctattattc caagttgaaa atttgatgtt
     3601 tgtcagatat aattgcaaac tattttcaaa tgcactgatt taaaactacc acagtttgag
     3661 gattttatgg agcaattatt tcaattttta gaacatcata ctgactttgt tatattagga
     3721 ttactaggct tattaagcgt aatctgcctt tggaaagcta ttgaacgtat tatgttttat
     3781 tccaaagtag atatttcaaa atacgatacc ctcgaagaat tagacatcga tttaacccac
     3841 aatttaacta ccatttcgac tatcggctct aatgcccctt atatcggctt attaggaacc
     3901 gttgtcggta ttcttttaac tttctatcat ttaggtcaat caggtggtga tattgatgcg
     3961 gcctctatta tggtaaacct ttctttagct ctaaaagcca ctgctgtcgg tatcttagtg
     4021 gcaattattg caatggtttt ctacaatggt tttggtcgta aagtggaaga aaacaaactg
     4081 aaatggttgg cattacaatc aaaaaagcct catcaagcgg tgtgatttag tccatttttt
     4141 gcaaattaat aaggcagaac aatgaaaaaa ttcgatgaaa tcaacatcat tccatttatt
     4201 gatattatgt tggtattact ggctatcgtg ttagttaccg cctctttcat ttctcagggt
     4261 aaaatccaag taaatgtacc gaaagcaagt acaacacagc caatgaaagc agacgattta
     4321 gcgaagcttt taaccattac cgaaaataat gagtttttct ttaatgatca agcaataact
     4381 aaagagcaat taattgctga agttgccact tgggataaaa gccaaaaagt gtcactcaaa
     4441 gttgatggtg cagtcgcctt cgaaaaattt gtggaattaa ccgatatcct ttctgcaaat
     4501 gaaattaaaa atgtagcaat cattactaaa aaagaaactg ctccagcacc ttcaagcaca
     4561 cctggtagcc ctgcacaagt gccagcagtc gcaccttaaa tagggtaaac aggtatgaaa
     4621 aaaaaacatt ctcgtatcgg cttattggca tctttggcta ttcacactgc cttaattggt
     4681 ggcacttttg cttggttaca taaccacaaa gtggaaaaaa ttgccgagca aaactctctt
     4741 tctatggaaa tggtggcagc attattagag caacctcagg ttgccgttgc tccggatcct
     4801 attaccgaag aggtcaaaga aatcgaaccg gagaaggcag aagtaccacc tgaacctaag
     4861 cttactccgg agccaactcc agagccggag gcaattccag atcctacgct aaatccgaaa
     4921 aaggaaaaac cgaaagaaga aaagcgtaaa gagcgacacc accataaaca taagcatcgt
     4981 cacaaagaga aaagggaaga gctacaagag caagaaaaac cgaaagataa gcctaaagag
     5041 cgcccgaaac atcatcacaa gcatattaaa gcattagagc gcgggccaga gataaaacaa
     5101 ggtattgtcg ctaaagcgat tccaaatgcg gctgaaggtg aaaaagtggt tgcgggggtt
     5161 gttggagggc aaaaaaacgg ttcaccaaat tcaacctcaa ctacaggttc agcaaatact
     5221 ggggctagca gtggtaatgc cagtgaactt gctgcttata aagtcgcatt acagcgagca
     5281 ttacagcgta aggcgaataa ctcttaccct cagcgtgaaa aaatgatgcg gaaaaccggt
     5341 acagttacga ttaaatttac cattacatcg tccggttcaa ttacaaatgt atccgtactc
     5401 aattcatcgg gaaatagtaa tttagataac gctgcggtac gcagtgcaga aggtttgagt
     5461 atgcctccgc caccggcagg cttccctcct acggtaacag taccggtaag atttgccctt
     5521 gaataaaaac agccctcaaa agcaatgtac ttttgagggc tttttattgc aaaaaattga
     5581 ctaaaaatga ccgcttactg cttgcgaata tcgccatttc tcacattcgg actcacttca
     5641 cccgtacgag tttctgtgct taacgaggta gaatttactt tcgtaaaagt ataatccgct
     5701 ttgctgaatt cacctgtttg attatttaag aagaaattgc ggtactcttt tacccataat
     5761 gccgttgcgc cacaaactgc cacaggcata actactaaat tcacaaatgg aatcatcgtg
     5821 aataggctca ctaaagcacc aaaggtaaaa tttaaagtgc gagactgcga caacgcattt
     5881 cgcatacgct gaaaactgat tttatggtta tcaaacggat agtcacaata ttgaatggcg
     5941 atcaaccaag caccgaagat aaaagtcagc acaggtgcta cggtttgccc aaccacaggc
     6001 aaaaagccta atacaaaaag agcaatcagc cttggaatgc tatacatcat tttttgccat
     6061 tctcgtttca gcattcgagg cacatctttt aacattgcac cgaatgacat atcgcccaaa
     6121 ggctcgccgg taagttgcag ttcgactttt tctgctaata acgcattaaa gggagcagca
     6181 acaaagttag ccaaggtagt aaaagcaaaa taaaatccca ctaatatcat caaaaaaatc
     6241 agtggaatca gtacaaagct aagccattcc agccagcttg gcagtaacat atccaacaag
     6301 ccaccgatat tggcaaaaaa tccccaaatc agccctacca tcagcacggt attaataaga
     6361 attgggaaaa tcacaaaagg caaaaattga cgttgtaaca ataaccgcca gccatatata
     6421 aaataatgaa agcctaatcc gacttgattt tgcggctcag aaaaaactga agacataatg
     6481 attccttatt ttctatcaaa attaattaga aatatggtaa gctacgcaca ttattttcgc
     6541 aaatatgaaa atacattttt tattgattat ttgataaaga ggacacaatg gaactgcata
     6601 ttattttttt tattcttgcc gggctactga ttgctgtact aattggattt agcctttggt
     6661 ccgctcgtcg tgaaaaatca aatatttttt caaatacatt ctcgaccaga cctattgctg
     6721 tgccaccaca gaataataaa atgagcaata gcatcccaac ctcattacag ccacaaaatg
     6781 aggattatca agcaatgtct gtgccggaag aaaatccgca acagatacaa caggaagttg
     6841 aaagctcgct gcaaaatatc aaaatcagtt tgccgggcgg aaatcctcag caacagcctg
     6901 agcaaattca gccgatacaa tcggtagcag aaccaacggt tagcacttac ggtcagaaaa
     6961 tttctaatca gcaacatatc caatacaata cgccggattt tgcaaaccca atggtgaaca
     7021 cagtggtgga agaaacacct caagcagtag ctatcgaacc tcaagaaacc caatcggcag
     7081 aggaagaaaa tccatttgta accctctatc tttacgcacc acaaaatgaa gctttccgcg
     7141 gtgattttgt agtacattat ttagaagaag ttggcttacg ttttggcgaa caccaaattt
     7201 tccaccgcca tcaacatatt gatgattcat taagtccgat tattttcagt gcagcaaatt
     7261 taatgaaccc aggaaccttt gatttaaata atatctcaaa ctttgcgaca gctggtttag
     7321 tgctatttat gcaacttcca accgaaggca atgatgtggc taatatgaag ttgttaatca
     7381 gtaacgctga acacttagca gcatcgttag ggggattctt atatgacgat aatcaacagc
     7441 cttttggcga agaatcccgc caacgttata tgcaacgtgt gatgcactaa ttgcgaaaaa
     7501 attaataaat ccgaccgctt gtacaagcgg tcttttttgt agagaatttt accaatgtct
     7561 ttatttaacc aaacctcttt atttgaagag aatgccacgc ccgagttagt cgagaaaatc
     7621 gaaactattc gccaaacatt gcgtcaatac gagtatgaat atcacgtttt agataaccca
     7681 agcgtacccg atgccgaata cgaccgttta atgaacgagc tgaaaaatct ggaatggcag
     7741 cacccggaac tgattagtgc cgactcgccg actcaacggg ttggtgccaa accgctggca
     7801 ggctttgctc aagtcaccca cgaaatccct atgctttcgt tggataatgc cttctccgat
     7861 gaagacttag atggcttttt acgccgtatg gaaagctata tcaccgcctc tccttcgcaa
     7921 ctggaatttt gttgcgaacc taaattagac ggcttggcag tgagtatttt atacgaaaac
     7981 ggtatactta cccgagctgc aacccgtggc gatggcacaa ccggcgaaga aattaccgct
     8041 aatatccgca ccattcgcaa tattccgtta aagctcaaca cgactaatcc acctgctcga
     8101 ttagaggtgc gaggcgaagt ctttatgcca caatcaggct ttaatgagct gaatgagaaa
     8161 gccttagcta aaggcgaaaa aacctttgcc aaccctcgca atgccgcagc aggttcgctt
     8221 cgccagttag atccgaaaat cacccgccag cgtccgttag tgctgaatgc ctacggaatt
     8281 ggggtgtatg aaagcgatga cgaactgcca gccacccatt tcgaacgttt gcaatggctg
     8341 aaatcgcttg gtattcctgt aaataatgaa atccgcttgg ttcaaggcaa agctgctctc
     8401 ttggcttatt atgcggagat tcaggctaaa cgcccaacat taggctatga tattgatggc
     8461 acagtattga aagtaaatga cattgcccta caagagcaac tcgggtttat ctctcgctcc
     8521 tctcgttggg cgattgcgta taaatttccg gctcaagaag aaatgacaat cctcaaagaa
     8581 gtggacttcc aagtgggaag aacaggggca atcacccctg tggcgaaatt agagcctgtt
     8641 tttgtcgctg gcgtaacggt aagtaacgca acgctacaca acggtgatga aatcgagcga
     8701 cttggtattg tgattggcga tacggtaatt attcgccgag cgggcgatgt aattccgcaa
     8761 attacaggcg tgatgttaga acgccgcccg gaaaatgcaa aaaaaattga atttccgacc
     8821 gcttgtccta tctgtcactc cgctgttact cgggtagaag gcgaggcagt agcacgctgt
     8881 accggtggtt tattctgcga agctcaacgt aaagaagcct tgaaacattt cgtttcacgc
     8941 aaggcaatgg atattgacgg cgtaggcgaa aaactaatcg agcagttaat ggctcgagag
     9001 ctgattgaaa cgcctgccga tctgtttaag ctcgatcaca ctaccctaat gcgattagag
     9061 cgaatggggg aaaaatcggc tcaaaatgct ctcaacagca tcgaaaaagc aaaaaacact
     9121 actcttcctc gctttttatt ctcgttaggt attcgtgaag tgggcgaggc aaccgctctc
     9181 aacttagcca accattttgg tagcttagag gcgatccgcc aagccacttt tgagcaatta
     9241 aaagaagtgc aagatgtggg cgaggttgtt gccaaccgta ttgtcagctt ctggcaagaa
     9301 ccgcataatg tggaagtggt ggaagatttg atcgctcaag gtgtacgttg ggaaaacgtt
     9361 gtgaaagccg aaattgtaga taacccgtta aaagataaaa acgtggtctt aaccggcacg
     9421 ctaacccagc tcacccgtga tgaagccaaa gccctattac aaagtttggg ctgtaaagtc
     9481 tccggctcgg tttccagcaa aaccgattac ttaatcgccg gcgaaaaagc cggttccaag
     9541 ctggcaaaag ctcaagagtt gggaattcag attttaagcg agcaacaatt tattgagctt
     9601 actcaacatt aacaaacaaa ggggcagatg attgaaatct gccccttatt ctatctattg
     9661 aatgcttaaa agcattaacc aatcaattta aactgctgag ctaaaaacag taacgtaaag
     9721 ctagttaagt aaattaagcc gataactgcc aaccaaaata accagccttt tgcacgatgc
     9781 tcacctttta gcactaaaga gaaatttaac cacgcaaaaa caggggtaga aacaaatgat
     9841 gaaatcattg caaattgtaa cattttcgcc acatcactca taaattggct aataattaaa
     9901 atgccgatga gtgcagttac cgtcatccaa atacttaatt ctgtttgtga atgttgctta
     9961 cgcccgctaa ttaaacgcaa cgcttctgca ttcgctcgtg aatatccatc aataacagtg
    10021 atcgttgtgc cgaacataca cataaatgca ataaatgcga ttaaaagctt agaccagtca
    10081 ccaatcgcaa aagcatacat tttgattaat tgagcaatat aggcaacacc ggcttgttct
    10141 actttctcac ctgaaccgta ctgaactaac gcacctaatg ctaaaaaaac aatcgccaaa
    10201 attgccgtgc cgatataacc cacattaaaa tcaaaaatac cgtcctcata attcacttta
    10261 cttaaacgtt ttttcgcaat aacccacatt gagttaatgg cagaaatttc aattggtgca
    10321 ggcatccagc ccattaatgc aacgatgaac acaagtgctg ctaaattcca cggcgaaggc
    10381 tctacgaaat ctggagcaat ttcaacgcca ccttttaaag cagcaatgat cacggcagat
    10441 accgtagaga tggttaaagc aatcataatc catttagata atgtatctaa gaatttatat
    10501 tgccctagaa gtaaaatacc ccaagtgacc acaatcacaa tagttcctgc cattggaatg
    10561 cttaaatcta acggaatacc taaagcagaa aaaataaatt ttagaatcgc tgctgaaaca
    10621 atcgccaccg cagctgtgtt aatcattgca gcaaaaacgt taaggataaa gaaaataata
    10681 agataaaact ttcctttttc tttgtagcct tccaataaag ttttaccgct agctaaggta
    10741 tattgcacac caaagcggaa aaacggatat ttaaataaat tggctaacag aataataatc
    10801 gccagctgcc agccataaat cgcaccagat tgtgtagagg caataatatg cgaaccaccc
    10861 actgccgcag atgccatcaa aatccccggc cccattgcag caaatttact ttgccaagtt
    10921 gaatgttcta tttgttgtgt catatagctt tccttatcac attactatca aaacaagatg
    10981 gtttcattct acttataaaa accaaataaa aacactcctc tagaaaagat gttcataaaa
    11041 taatacagat attatgctga atagagagta tgaaatgata agaaagcatt tataaaaatg
    11101 atttaataag aattaaaaac taagatagaa tataaaaatg gttttaaata aaattaaaaa
    11161 taaattgtaa atttttattt accaagattt ttagcaaagt tttcactaaa aatgaccgct
    11221 tgcaggcaat aaaaaagtgc gtttccgcac tttttactaa aatgatttaa ttactcaacc
    11281 aatgctcacc gttgccatta gctggtggat taatcggttg gttattattc ttacctggaa
    11341 taataatttg aggctgatcg tacatacatt tgttgttcga caatatatca cagggaatag
    11401 cacatacggc aggggcagaa agaagacaac ttgaaccacc tttttgatta caattctcta
    11461 atgcattttc ttcagcaaga ctactaacga taccataccc aaaatcctcg aagccttgac
    11521 catctttata accttgtgca aaagcaaggc acatattact aaacgataag atcatttggc
    11581 aattacgacc accgttcttt tcacactgtt taaacgcatc ttgcttcgca ttttctaaat
    11641 ttttagacgt attatcagtc acccacatca tattttgttc aggtgacata taaattgatg
    11701 accataaacg aggctgtgtt ttacgctttg ctaagtcctc tttactggca atggttaccg
    11761 cttctttata ttcaccacat ttaaactctt tttcgacatc accaaaacca ttcatttcac
    11821 gaacagaagt gattttatta tcagcgtcag caaaaagata tgtccaagtc gatccacctg
    11881 tataaacctt atctgttgtc ataaatatag tggttgcatt acgaccaact tcataagttt
    11941 gcaaattata caaagctagt tgaataacca taaacatagc ttaattcatt atcttttacg
    12001 cattgaaccg ctgtatcagg taaacgttta cgtgcaaaaa attcagatac atctttacca
    12061 cgccaataaa cactatctag tggcttaatc attgtagaac aagcggtcaa aaataatgac
    12121 aaaataacaa atagcaaaga acttattttg aaatttataa taattacctc aaaagaaaaa
    12181 agagcaagct ttcacttgct ctttttatgt tacttagaat agcgttggaa cactaaacac
    12241 gcattagtac caccaaagcc gaagctgttt gacatcacgg ttgttaatgc tttgtcttgg
    12301 cgttcagtca caatattcat accttgtgct tgttcatcaa gggtttcaat attaatgctt
    12361 ggtgcaataa aattattatc taacattaat aatgaataaa ttgcctcgtg cgcacctgct
    12421 gcacctaatg agtgtccggt cattgatttg gttgatgaaa ttgctggcgt tttatcacca
    12481 aagacattac ggatcgcccc taactctttt acatcaccca ctggagtaga agtgccgtgt
    12541 acgttaatat actcgatttc accatttaca gttgccatcg cctgtctcat acaacgctca
    12601 gcaccttcac cacttggcgc gaccatatcg taaccgtctg aggttgcccc atagcccaca
    12661 atttcagcat agattttggc accacgagca agagcgtgtt ctaactcttc caccacaacc
    12721 actgcaccac caccggcaat cacaaaaccg tcacgattag catcataagc acggctagct
    12781 tttgttggtg tttcattata tttagttgaa acagcaccca ttgcatcaaa ctcggttgca
    12841 cattcccaag aaagttcttc tgcaccacct gcaaacacca catcttgttt acctaattgg
    12901 attaactcca tcgcgtgtcc aatacagtgt gctgaagtcg cacaagctga gctgattgaa
    12961 tagtttacac cacgaatttt ataaggtgtt gccaagcatg ctgacacact tgatgccatt
    13021 gttttggtta ctgcgtaagg cccaacggct ttcacaccac gtgggccacg tactgcatca
    13081 caagctacaa gttgactgtg cgccgagcct gtaccagctc cgatcaccaa accggtacga
    13141 tcgtttgaaa cttgttcttc ggttaagcct gagtcttcga ttgcttcttt cattgaaaga
    13201 taagcgtaag ccgcagcatc tcccataaaa cgatagattt tacggtcaat taactcagcc
    13261 ggatttaatt taatcgtacc tgccacttgg ctacgcatac ccacttcagc aaactcaggc
    13321 acaaattcaa tgcctgattt acctgctttt agtgattcca acacttcttc tttgttgtta
    13381 ccgatactgg aaattacacc taatcctgta ataacgactc ttttcatttt gtttccttca
    13441 tcattttgat ctgaaaaata cttgattcag cttacacttg ttcactcaaa taagctacta
    13501 aaacttgatt attttacaca atttcattac tggtctgaac tctttctatc aagatagcgg
    13561 ttgaatttca gacatttttt gcaaaatagg gaatgaaatt taatttcccg attttttacc
    13621 ctattacata ataatcactt ttccgctaaa atgctaaaca gttcacactt tagtaaggaa
    13681 agctgacgtg aaaacattaa ccctgacagc caacaaaata acagccgtag aaggcgctgc
    13741 cattggggcg aaccagggga gcttcgccca aaaattaaac tctactaaag cacgaattga
    13801 tcaacttaat gcataccgaa tagaacgagc tatcaatgct aataatcatc attttatgca
    13861 tgttttctct ctcattccat tgcttattca tcttaatcac cctgtgttac cggcttatgt
    13921 tgaaaatgca ccacaaggga tttggcattt tcaactctct gattatcaaa aacaatttct
    13981 ggtttcttac cgttttgatg aagcaatctc tgccgatcat ttgggccccc atcccagctt
    14041 tgatgctctt tattcgatgg gtagcaccgg tactattacc caaacaagct gttctgattt
    14101 agatttatgg ctatgctatc cgaaccattt tacaattgaa caatataagt taatggagct
    14161 caaaattaat aaattgcaag aatgggcaaa gacattccaa atcgacatca atatttattt
    14221 aatgaaccca gaacaattta agagccaaac ttataacagt agcgtaaccg atgaacacag
    14281 tggttcagca cagcattttt ttctattaga tgaattttat cgttcagcta ttttacttgc
    14341 cggtaagcgt ttactctggt tgcatttaca taaaaatgaa taccaaaatg ttcacaataa
    14401 ccctgaaatt gacttaacgg aatggattga tttcggcgat ttttccagcc tttcaaccag
    14461 tgaatttttt ggtgcaagct tatggcagct ctacaaagga attaataacc cttataaatc
    14521 ggcaattaaa attttattgc tcgaatgcta cgctcacact tatcctaaaa caaagctcat
    14581 ctccaaagaa tttaagaaaa aactactaag tgacaatgct ttggaatatc actttgatcc
    14641 ctacttagcc atgcttgaat tggtaacaga acacttaaga tcacgcaaag agtgggtgaa
    14701 attagaccgc ttgcgagtct gtttttatgc aaaagcggtt gagggagaaa taaataacaa
    14761 ctggagaagt cgtgatttag acgagctggt taaccaatgg tcttggtcag aaaaacaaat
    14821 tcaattactt caaaaccgtc aacattggaa aattaagcaa gtgatgaatc atgagaatat
    14881 gctgattgat catttactac aaagttatcg aaatttaatt cattttgctc gaaaatttca
    14941 tattaatccg agcattatga caaatgatac tgatatttta atgcgaaaac tttattctgt
    15001 atttgaagca ctttcaggaa aaatatcttt aattaatcat aaaatatcgt ccaatttagc
    15061 agaaaaagca attacattta ttgaagctaa agttggatct gcgttacaac ccggttggta
    15121 tttagttaat caggcaccta aaagtcgtta tgactctgaa aatcgttatg tccattataa
    15181 taaaagcccg attaagctta ttgcttgggg gtattttaac ggcattatta acgcagcaac
    15241 taatttacat actgttagcc ctaatttaga tatcgagaaa ttgcgacaat ttatcaccga
    15301 cttgcgctta tctttcccaa ttcaagcgcc ggaagtgacc aatgatgaca tgcatcaccc
    15361 taatgaaatt cgcaatttgg ttatagcgct taatttagta caagatccaa ccgaacatat
    15421 cgatgaacta ccaaaaaaag tttatccaag cgatctgttt aattttggta aggcacaaaa
    15481 aacgttagtt ggtagtgtga gcattattta tcgaaatgta tggaatgaaa ttcgaactca
    15541 acattttgac ggtgaagatg ctattttaaa agcactaaaa ttggtatcca atcgaattta
    15601 tcaaggaaat tcttcacctc aatcagttaa tgttttttgc tatagtaaat atctacgtag
    15661 tgagttacgt gattttgtgg cagatttagt tcataaatgt attacaattc agactggttg
    15721 tttactgcaa gagaatgaat ttagcacttt aaaagtagca ggaaaaacct ggcagtttct
    15781 ttttcataaa aaaacattta gcattaaaca aattgatgaa caacaagcgg ttgaaaattt
    15841 aaattctttt gcaaaaacca agcaaaatgc taaaagcgaa aatgaaaaga aaaaagaatt
    15901 tccgcagcaa attagtgaat ttgccagtga aggcttttta cagtttttct ttgaagacaa
    15961 tgtcgataat agttttaatg tatatgttgt agatgaacgt aataatgtcg aaagttacta
    16021 taactgtttc ggcaataaag aagagaaaat caggaaaatc aataaattac aaaatgaaaa
    16081 acaattaaaa acagaaacac cagcatcatt tggaagcttt aatcatccac aattttatca
    16141 acttatttca ccaaacggtg agttatgtat tgtgccgttt caaagccgcc agcatttaga
    16201 ttatttagca caaaaacatc attaatctta tttatattat acaggtggga attctatgtc
    16261 aggattagtt agtccggaat taattaaaac agtcgcatta cttgcaacca gcgtcactat
    16321 tgtaccgcta tttaaacgcc ttggtttagg aagcgtattg ggttatttag tcgcaggatg
    16381 tttaatcggg ccatcgggca ttggattgtt ccaagaccct gccgctgttg tgcatatggc
    16441 agaacttggc gtggttatgt ttttgtttat tattggtttg gaaatgcacc cggaactgct
    16501 ttgggcgatg cgtaaagcca tcttcgggcg aggtttctta caagttgcga tttgcggtac
    16561 tttattaacc ttagccggca tttacttatt aggtttttcc aaagaagtgg catttattgc
    16621 cggtatgggt tttacgctat cttctactgc cattgtaatg caagtgctgg aagataaagg
    16681 gataagttcc acgccaaaag ggcaacgtat tgttgcaact ttactatttg aagatttagc
    16741 gattgtgcca ttattagcct cggttgcctt tcttgctcct aaccaagtag atgctgaatc
    16801 cagtactaat tggtctgcta ttggtcttag cctagttgcc gttcttattt tggttgcgag
    16861 tggaaaatgg ctgatgaacc ctattttccg tgttatttct aaagccaaag tacgagaaat
    16921 gatgactgcc gctgccttac ttgtggtatt aggctccgct cttttaatgg aaatcagtgg
    16981 gctttcaatg gcaatggggg cattccttgc cggagtaatg ctttcggagt cttctttccg
    17041 ccatcaacta gaagctgata ttgaaccctt ccgtggttta cttttaggct tattctttat
    17101 gggcgtagga atgtcattag acctcagcct cgtcctcaat aattggctat ggttattggt
    17161 gattgtagca gtttatgtta tcggtaaagg ccttggaatc ttcattgctg cctctatcac
    17221 ccgattaaca ctgaatgaat ctattgtgcg aactaccatt atggctcacg gtggtgaatt
    17281 tgcctttgtg ctattctcag ccgccgcaac cgctgggatt ttaaccccag atactcacgc
    17341 taccttaacc gctgcggtaa ttgtctcaat gttgctttcc ccacttctca ttttaatcaa
    17401 gcaaggagtg agaaagaaaa aagcgaaaaa tgaatccact aatatgacag gggttgaatt
    17461 accggaagat ttagaagcca atgtattagt catcggtttt ggacgcttta accaaatagt
    17521 ctgccaagcc ttattagcca aaggactaag tgtatcggtt attgattcaa atactgatca
    17581 tattcgtgct gctgctcgtt ttggttttaa actttactat ggtgatggag cgagactaga
    17641 tgtacttagg gcatctggca tcgccaatgc aaactgcgta attgttggcg taggcaatcc
    17701 ggaaagaacg gagaaaatcg tagagctgat taaatctgaa taccccttag tacctgtatt
    17761 tgcgagaacc tatgatagac aaagtgcggt tgatttagtc aaaaagcacc acgttgatta
    17821 tcacattcga gaaacctttg aatcagccct cgcattaagc caagccgcca ttgaacgctt
    17881 aggttctagc gaggaagagg caaaacaaat tatcagctat gttcgccgat tagatgcaga
    17941 acgctttaat gaggaattat tacacggttt ctccgcagaa gttatccgca aatattgggt
    18001 accaacacct tgggtaaatc cacaacacga aggtagtgca cttaatgaag aaacggctga
    18061 tattttagaa gagcttggtg agacagtaga agttataaaa gtggatatca ctgataaaaa
    18121 ttaaagaatt tatactttga atccttattc a
//
LOCUS       DANLXO010000051        18090 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.051, whole genome shotgun sequence.
ACCESSION   DANLXO010000051 DANLXO010000000
VERSION     DANLXO010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18090
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.051"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            138..1229
                     /gene="ulaG"
                     /locus_tag="PXD69_001431"
     CDS             138..1229
                     /gene="ulaG"
                     /locus_tag="PXD69_001431"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HDL6283629.1"
                     /translation="MSKIQEITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     CVGVWIKTPAGANICMDLWCGRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVL
                     DPFAINEVDFILASHYHSDHIDVNVAAAICNNPKLDHVKFVGPWHCAELWKKWGVPEE
                     RIIVVKPGDVVKLKDVEIHALDSFDRTCLVTLPVEGAEERGGELAGLCPSDEEMGRKA
                     VNYVFKTPGGTIYHGADSHYSIQFAKHGKQFDIDVALNNYGENPVGIADKMTSVDLLR
                     MAECLRCKVIIPVHHDIWTNFMASTQEIIDLWRMRKDRLQYQFHPFIWEVGGKYVYPR
                     DKDLIEYHHPRGFDDCFEQEPNIQFKSML"
     gene            1313..2059
                     /gene="ulaR"
                     /locus_tag="PXD69_001432"
     CDS             1313..2059
                     /gene="ulaR"
                     /locus_tag="PXD69_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HDL6283630.1"
                     /translation="MNESYRHKELLALLEERKALSTADIMQLLNISPATARRDISKLD
                     GQGKLKKVRNGAEAILAPTFLQHTKITNNAQEKRRIAEAAGRLCKDGESLILTCGSTM
                     EMLGEVLCGRKLQIITNYLPLANQLIAGCHDDVVIMGGQYNKHKKVMLSINTQNEMTY
                     AATTMFTSGKGLTSEGLFKTDMIIANAEQQMAKHAERYVVLLDSTKLGKKVGMLFKEF
                     DKIDLLITGKEADPTIIQALRNKGLDIILA"
     gene            2114..2974
                     /locus_tag="PXD69_001433"
     CDS             2114..2974
                     /locus_tag="PXD69_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HDL6283631.1"
                     /translation="MRKHKLGIYEKALPKNISWQDRLSIAKVCGFDFVEMSIDETDER
                     LARLDWSKKERAKLVKTIINTGVTIPSMCLSGHRRFPFGSCDEATRQKAYEIMEKAIQ
                     LAVDLGIRTIQLAGYDVYYEEQDEGTIQRFQQGLEWAVELAASNQVTIAVEIMDTQFM
                     SSISRWKKWDEIIKSPWFTVYPDLGNLSAWNDNVAEELKLGIDKISAIHLKDTYKVTE
                     TCKGQFRDVPFGDGCVDFAACFKTLAELNYRGAFLIEMWTEKAEEPITEIINARRWIE
                     QKMQEGGFTL"
     gene            2971..3690
                     /locus_tag="PXD69_001434"
     CDS             2971..3690
                     /locus_tag="PXD69_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HDL6283632.1"
                     /translation="MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRE
                     TGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKKPSSDTETHLELYRQFTDIGGVV
                     HTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET
                     FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPM
                     QQELLDKHYLRKHGANAYYGQ"
     gene            3911..6388
                     /locus_tag="PXD69_001435"
     CDS             3911..6388
                     /locus_tag="PXD69_001435"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012311.1,HMM:TIGR02601.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL6283633.1"
                     /translation="MYLLEGNQKVKNRNYFVAIATILALSPEVNATELSDQLASRTRY
                     YPSATDSYYSYYKYAPIYSGYYTSNSRNGYSSWYYPGSNAGVTTRTVSTTVNGITVTK
                     VYTTHNGRTTVRTTYAPAVNKPIVNKPTPIANKPVVDTPTQPVIDANPIMDPPVQPIV
                     DNKPITDTQPNPITDNKPVIESPIDDTRPVIIRPTTPVNLHPEPVAVGVPNVGIRWND
                     RSRGYNIDDPNNKQNVKLTGEGVKVGILDSGFKNYLMQDDILKKFGNRAVIIETGRTA
                     PASATHGIEVAEMVGGGNSRNGVASKSTLLLADITKTTNAGTGLSATAPIYYDLWNRG
                     ARIFNQSYGIPKPLTYFNNNRNSSYYYLHQFDGNVLQFYKDKVKEGGLFVWAAGNNRG
                     DLDPSLQAGLPHYEADLEKGWISVVAVATRTNQGLGNFEWSNLLPYSQAGVAKNWTVT
                     AMGDYIFNLGGRNIIASGSSFAAPAVTGTAALVKQKYPWMDGNLIKQSILSTATDIGA
                     PGVDDVYGWGLLNIEKATNGPARFGKRLALADNVTVNIPNGSYEFSNNINGDAGLVKN
                     GQGELILSGASTFEGDTTLNEGAVTINGKKYVSKVNVSPSGTLVVNNTTLENGVNNEG
                     TVVNQGYSTIKRAYVASAQSTLVSDLGSNLNVKGEVDLNGSTLSLAAVKEGKAQYVTQ
                     KGLSMSAITSDSAIKGNFAAIETSGLLTATAEKTNENEVKATVSRKNVATALESSFSA
                     LDNQIEGNNGSTNATNDEFAQQAATLQNSIANINTQSVVLDSLSGQIYASAQALTFEN
                     SETVNKDLSNRLVMLGTLDNVGETAGV"
     gene            6398..7213
                     /locus_tag="PXD69_001436"
     CDS             6398..7213
                     /locus_tag="PXD69_001436"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL6283634.1"
                     /translation="MYGNGTLKEIGFGEGKTNTYAGQIGFDKPVTDHVILGAALNYSK
                     AKVNFDRYGGSSKADGIGASLYARIGNKHKTPWYLQGRAGYGSVDSDVERHIILADNN
                     ASTAKINHRDRVFSAYVESGYDFKQGRFALTPFVGFSHDVVRRGAFSEQNSQFGLTAD
                     KATYKQTSGLIGLRTSLEVNLAGMKTTFQGYVNHQKAFNREDLSFKASYTGLQDAKFD
                     VKGIGLAKHKTWVGIGALAEVNKNTSLYVNYDLKLAKNSGHNNVVTAGIRINF"
     gene            complement(7300..8160)
                     /gene="pdxY"
                     /locus_tag="PXD69_001437"
     CDS             complement(7300..8160)
                     /gene="pdxY"
                     /locus_tag="PXD69_001437"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HDL6283635.1"
                     /translation="MKNILSIQSHVVYGYAGNKASTFPMQLLGVDVWALNTVQFSNHT
                     QYGKWGGMVMPKEQIGSIVDGIHNIGELHRCDAVLSGYIGSAEQVAEIIQAFHKVKAE
                     NPNAIYVCDPVMGHPDKGCIVADGVKEGLINLAMAQADIITPNLVELRELTGLTVENF
                     EQAVEAVKVILTKGPKKVLVKHLSRVGKESNKFEMLFANQDGIWHISRPLYQFAKEPV
                     GVGDLTAGLFVANLLNGKSDLEAFEHTANAVNEVMEQTARSGLYELQIIASRDRIVNP
                     QCSYQAVKIA"
     gene            8279..8354
                     /locus_tag="PXD69_001438"
     tRNA            8279..8354
                     /locus_tag="PXD69_001438"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8312..8314,aa:Thr,seq:tgt)
     gene            complement(8449..9402)
                     /gene="accA"
                     /locus_tag="PXD69_001439"
     CDS             complement(8449..9402)
                     /gene="accA"
                     /locus_tag="PXD69_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDL6283636.1"
                     /translation="MSQEFLDFELPIAELEAKIESLRAVSEQDDKINLDDEIKRLQKK
                     SEELTKKTFANLDAWQISRMARHPNRPYTLDYIEHIFTEFDELAGDRAFADDKAIVGG
                     IARLDGRPVMVIGHQKGRTVKEKVKRNFGMPAPEGYRKALRLMEMAERFNMPIITFID
                     TPGAYPGIGAEERGQSEAIARNLREMSQLSVPVICTVIGEGGSGGALAIGVGDKVNML
                     QYSTYSVISPEGCASILWKSADKASTAAEVMGLTAPRLKELELIDNIVPEPLGGAHRN
                     VEQIAQNLKQRIVEDLAGLDQLNKEDLLERRYQRLMNYGYV"
     gene            complement(9456..10880)
                     /locus_tag="PXD69_001440"
     CDS             complement(9456..10880)
                     /locus_tag="PXD69_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HDL6283637.1"
                     /translation="MKKQITRRQFLQGSALAAGFATVPTPLLAAERPQLNIPPLMDIG
                     RGKPVRLDLRPAQTQFDKGKLVDVWGVNGQYLAPTVRVKSGDFVKLTYLNNLPQKISM
                     NIQGLQASSEMIGTVHRSLDPKSSWSPIVSINQPACTCWYHADTMLNSAFQVYRGLAG
                     LWMIEDEQSKKATLPNKYGVNDIPLILQDQLLNKDGVQVLDKNTSQFFGKRLFVNGQE
                     SPYFNVPRGWVRLRIVNASLSRAYELRLDNEQPLYLIATGLGMLAEPLETESVQLAPS
                     ERVEVLVDLSEGKAVSLISGQKRDIFYKIGQVFADNDELNDNVILELRPEGMAAVLNN
                     KPSLPAFNLEEFNLKISQERRFAIRPADYLINQKRFDPKRIDFTAQKGSVERWYLHST
                     QAVGFTLQGAKFIIETLNRKQYPIKQLAWRDTVWLEAEQEITLLVRFDNTAPEQLPFT
                     FGVSDFMLRDRGTMGQFSVIENGQ"
     gene            complement(10882..11616)
                     /locus_tag="PXD69_001441"
     CDS             complement(10882..11616)
                     /locus_tag="PXD69_001441"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HDL6283638.1"
                     /translation="MLKIFRILIVALAAIFISIFGTIYALLRLRHPSSVGVVARWFGA
                     LHKLVGLELITRKKPEINYPVVYIGNHQNNYDMVTISSMVAEKTVSIGKKSLIWIPFF
                     GLVYWATGNIFIHREKRSSAIETMNKAGQIVKERNVSVWMFPEGTRSRGRGLLPFKTG
                     AFHLAISAGVPIVPVVCSNLHNKVDLNRSNNGTVICEMLDPIDTSGYSRENVKELMEK
                     CHQIMLAKFEQLNQEVEQLENTAKNA"
     gene            11763..12260
                     /gene="tpx"
                     /locus_tag="PXD69_001442"
     CDS             11763..12260
                     /gene="tpx"
                     /locus_tag="PXD69_001442"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDL6283639.1"
                     /translation="MSKVTLAGSPIDVAGTFPQKGDVVADFTLVNSDLSDVSLSDFDG
                     KRKVLNIFPSIDTGICATSVRVFNQKAADVANTVVLCISADLPFAQARFCGAEGIENA
                     KVLSSFRHRDLHNKLGVDIISGPLAGLTSRSVIVLDENNKVLHSELVPEIKQEPDYEA
                     ALAVL"
     gene            complement(12345..13970)
                     /gene="yidC"
                     /locus_tag="PXD69_001443"
     CDS             complement(12345..13970)
                     /gene="yidC"
                     /locus_tag="PXD69_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDL6283640.1"
                     /translation="MNNRGLLLMGLFLVSILIFTQWQQDFDPEIQAQKQAQVAAQTQQ
                     AGDLPSASNANNPIADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNT
                     PFKLLQQDGDKIYVAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQNEISVPLTFEK
                     EGVVYTKTFTLKRGSYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTG
                     GAYSSSETNYKKYSFQDMEKANLSVDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRTN
                     NGVATIGYRGPLTTIAPNSEANLNSKLWTGSKDQKEMGESANHLDLTVDYGWAWFIAK
                     PLFWLLTAIQKIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRER
                     FGDDRQRMSQEMMKLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGW
                     IQDLSAQDPYYILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFFLWFPSG
                     LVLYWLTSNLITIAQQWLIYRNLEKKGLHSRKK"
     gene            complement(14123..14548)
                     /locus_tag="PXD69_001444"
     CDS             complement(14123..14548)
                     /locus_tag="PXD69_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HDL6283641.1"
                     /translation="MTIWKQTATCEQLNTLSQKSAVSHLGIEFTAIGEDWIEAQLQVD
                     ERTQQPFGVLHGGVSAALAETTANAGALMVCEPHQIAVGMELNISHLKSIPAGTKAIA
                     KATPLKLGREVQVWNIDIKDEQGNLCAVARLSTKTLDKR"
     gene            complement(14877..17969)
                     /locus_tag="PXD69_001445"
     CDS             complement(14877..17969)
                     /locus_tag="PXD69_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDL6283642.1"
                     /translation="MIPRLSEVPQLDKATQSYLTELVNQHFSGEIASNYADRLSLATD
                     NSVYQQIPQAILFPKSVSDVVILTKLAQKPEYQHLTFTPRGGGTGTNGQSLNNNIIVD
                     LSRHMNQILELNVEERWVRVQAGVVKDQLNQFLKPHGLFFSPELSTSNRATLGGMINT
                     DASGQGSLQYGKTSDHILAIKSVLINGDILETQAVKSADFFAHIEGLNLSALGKTLHR
                     EIFNRCKTLRPKVLNELPQLNRFITGYDLKNVFNHGESEFNLTRILTGSEGSLAFICE
                     AKLNLLPIPKYRTLINIKYNSFDAALRSAPFMLEAKALSVETVDSKVLNLAKQDIVWH
                     SVSDLLTEDPANPILGINIVEYASSDQTQIETQVKALCQSLDQKMANNEAGIIGYQLT
                     SDVNSIEKIYAMRKKAVGLLGNAKGWAKPIAFVEDTAVPPENLADYIVEFRALLDRYN
                     LPYGMFGHVDAGVLHVRPALDLCDKAQVETFKQISDQVVELTAKYGGLIWGEHGKGMR
                     SYYGERFFGETLWQELRYIKTLFDPYNRLNPGKICTPLESETSLYPIDSQMRADFDRQ
                     IPIQVREEFKGAMNCNGNGLCFNFDVHSTMCPSMKVSGNRLYSPKGRATLVREWLRLL
                     TEQNVSPDDLIFKPRKQAVKLADFVAKIRNTLNKNKEYDFSHEVKAAMDTCLACKACA
                     SQCPIKIDVPTFRSQFNELYHSRYLRPLKDYVVSNLEFIAPLMAKQPRFFNFFSTSTF
                     AEKAANKTIGMTYLPALSVPNLQHQLVEVGYQGESLESLEQQATSGDFSAKNCKTLFI
                     VQDPFTSYYDAKVVADFIALIKKLGFKPIVLPFKPSGKAQHVKGFLHKFAKTAKNQAD
                     FLNRVAKLGLPMVAVDPALTLLYREEYKEILKEARGDFKVLLAHEWLREVIKNGELEN
                     CKKSANSDRLPWYLFAHCTESTALPSSMKEWQAIFTHFGETLLNENVGCCGMAGTFGH
                     ETKHVEMSKAIYQQSWQIKLKNKPLERCLATGYSCRSQVKRFEQQGIKHPIQALLDVI
                     "
BASE COUNT         5166 a         3646 c         3948 g         5330 t
ORIGIN      
        1 taaattttta ccagtaaatc ataaaaaatt agacatagat cacatttttg aataaaaaag
       61 atgtacaaat ttttgtgatt gtttatgatt ggttttgatt gcattgttct tattttagcg
      121 taaatcagga gactattatg agcaaaattc aagaaatcac tcgtgaaagc tggatccttt
      181 caactttccc tgaatggggt acttggttga atgaagaaat tgaagaagaa gttgtaccgg
      241 aaggcaattt tgcaatgtgg tggctaggct gtgtcggtgt gtggattaaa accccagctg
      301 gtgcgaatat ctgtatggat ttatggtgcg gtcgtggtaa atccaccaag aaagtaaaag
      361 atatggtgcg tggtcatcaa atggcaaata tggcaggggt gcgtaagctc cagcctaatt
      421 tgcgggctca accgatggtg ttagatccgt ttgcgattaa cgaagtggac ttcattctcg
      481 cttctcacta tcactcagac catattgatg taaacgtggc agcggctatt tgcaataacc
      541 cgaaattaga ccacgttaaa tttgtcggcc cttggcactg tgcagaatta tggaaaaaat
      601 ggggcgtgcc ggaagaacgt attattgtgg taaaaccggg cgatgtcgtg aaattaaaag
      661 atgtagaaat tcacgcccta gattcatttg accgtacctg tttagtgacc ttaccggtag
      721 aaggtgcaga agaacgtggc ggagaacttg caggcttatg cccatcagat gaagaaatgg
      781 gacgcaaagc ggtgaactat gtgttcaaaa ccccgggcgg tacgatttat cacggtgcag
      841 attctcacta ctcaatccaa ttcgctaaac acggtaagca atttgatatt gacgtagcgc
      901 tgaataacta tggcgaaaac ccggttggta ttgcggataa aatgacttca gttgatttat
      961 tacgtatggc ggagtgttta cgctgtaaag tgattattcc ggttcaccat gatatttgga
     1021 caaactttat ggcaagtacg caagaaatta ttgatttatg gcgtatgcgt aaagatcgct
     1081 tacaatacca attccaccca tttatttggg aagtgggcgg caaatatgtt tacccacgtg
     1141 ataaagactt aattgaatat catcaccctc gcggctttga tgactgcttc gagcaagagc
     1201 caaatattca atttaaatcc atgctatagg tgagcagtcg ccactctcac tggagagtgg
     1261 cgttttagca agttcattat ggagcagtag tgattagtaa tgggataaag tagtgaacga
     1321 aagttataga cacaaagagt tattagccct gttggaagag cggaaagcac tgtcaacagc
     1381 agatattatg cagctgttaa atatttctcc ggcaacagca agacgtgata tcagtaaatt
     1441 agatggtcaa ggtaaattaa aaaaggttag aaacggagca gaagcaattc tggctcctac
     1501 atttttacag cacacaaaaa taactaacaa tgcgcaggag aaacgtagaa tagcggaagc
     1561 tgccggtcgt ttatgtaaag atggggaaag tcttattctg acgtgtggtt ccacaatgga
     1621 aatgctcggt gaagtattat gtggtagaaa attgcaaatt attaccaatt atctaccgct
     1681 tgcaaaccag ttgattgcag gttgccacga tgatgtagtg attatgggtg ggcaatataa
     1741 taaacataaa aaagtgatgc tctcaattaa cacccaaaat gagatgactt atgccgctac
     1801 cacaatgttt accagtggca aaggcttaac cagcgaagga ttatttaaaa ccgatatgat
     1861 tattgccaat gccgagcaac aaatggcaaa gcacgcagaa cgttatgtgg tgttattgga
     1921 tagcaccaag ctcggcaaaa aagtcggtat gctgtttaaa gagttcgata aaattgattt
     1981 attgattacc ggcaaagagg cggatccgac tattatccaa gcattaagaa acaaaggcct
     2041 ggatattatc ttggcttagc ctgtagcggt caaatttaat caaaatttta cttatcatct
     2101 tcaagggaaa actatgagaa aacataaact gggtatttac gaaaaggcct tgccgaaaaa
     2161 catttcgtgg caagaccgcc tttctatcgc caaagtctgc ggttttgact ttgtggaaat
     2221 gtcgattgac gaaacggacg aacgcttagc ccgccttgat tggagcaaaa aagaacgtgc
     2281 caagctggtg aaaaccatca tcaacaccgg cgtgaccatt ccgtcaatgt gcttgtccgg
     2341 tcatcgccgt ttcccgtttg gttcttgtga tgaagcgacc cgccaaaaag cctatgaaat
     2401 tatggaaaaa gccattcaac tggcggtcga tctcggtatt cgcaccattc agcttgccgg
     2461 ctatgacgtc tattacgaag agcaggacga aggcacaatc caacgcttcc aacaaggctt
     2521 agaatgggcg gtggagctgg cggcaagcaa ccaagttacc attgcggtgg aaattatgga
     2581 cacccaattt atgagttcga tttcccgctg gaaaaaatgg gacgagatca tcaaatcacc
     2641 gtggttcacc gtgtatccag atttaggcaa cctctcagcg tggaacgaca acgtagcgga
     2701 agagctgaaa ctcggcatcg acaaaatctc tgccattcac ttaaaagaca cttacaaagt
     2761 gactgaaacc tgcaaagggc agttccgtga tgtgccattt ggtgacggtt gcgtagattt
     2821 cgccgcttgt tttaaaaccc ttgccgagct gaattaccgt ggcgcattct taattgaaat
     2881 gtggacggaa aaagccgaag agccgattac tgaaatcatc aacgcccgcc gttggatcga
     2941 acaaaaaatg caagaaggag gatttaccct atgacgcaat taactgaatt aacccctgca
     3001 ttacaagcct taagagagcg tgtgttaaaa gccaatttag aattaccgaa gtatggcttg
     3061 gtaactttca cttggggtaa cgtaagtgaa atcgaccgtg agaccggttt agtcgccatc
     3121 aaaccttccg gcgtagaata cgatgcgatg acggtggaag acattgtatt ggttgattta
     3181 caaggtaatc gagtttacgg agataaaaaa ccgtcttctg atacagaaac gcacttagaa
     3241 ctttatcgcc aattcactga tattggcggt gtggtacaca ctcactctcg caatgctgta
     3301 ggttgggcac aagcagggcg tgatttattg gcacttggca ccactcaagg cgattatttc
     3361 tacggtgcga ttccttgtac tcgcaaaatg accgcagagg aaattgccgg cagttatgag
     3421 ctggaaaccg gaaaggtgat tgtcgaaact ttccgaactc gaggtattga accgaaagca
     3481 gttccaggtg tgttggtaca ttcacacggt ccatttacct ggggaaaaga tggacacgat
     3541 gctgtgcata attctgtggt attagaagag gtggcttaca tgaattttat tagccatcaa
     3601 attcgcccac aaattggccc aatgcaacag gaattattag ataagcatta tctgcgtaag
     3661 catggtgcaa atgcttatta tgggcaatag ctaataacct aaaaattatt ttccaaatta
     3721 tcaacagctt tcgaggggct ttctataatc ggaatagctc ctcagtctgt ttgagtttat
     3781 ggatagatcc acaaataatt accattttcc ttttcttgat tttaattttg atttttgttc
     3841 taatctctgc ctcttgtttt tacaagtcta ttaaggatcc gtagtagatt tgaaataaac
     3901 aagagtatct ttgtatttat tagaaggaaa ccaaaaggtg aaaaatagaa attattttgt
     3961 tgcaatagca acaatattag ccttatcgcc agaggttaac gcaactgaac tttcagatca
     4021 gcttgcaagt agaacaagat attatccttc cgccacggat agttattata gttactataa
     4081 atatgcaccg atttattcgg gctactatac atcgaatagc cgtaatggtt attcgtcgtg
     4141 gtattatcca ggtagcaatg caggtgtaac aaccagaact gtttcgacaa cagttaatgg
     4201 cattacagtt acaaaagttt atacaacgca taatgggaga acaaccgttc gtaccactta
     4261 tgctcctgct gtgaacaaac caattgtaaa taaaccgaca ccgattgcca ataaacccgt
     4321 tgtagatacg ccaactcaac cggttattga tgccaaccca attatggatc cgccagtcca
     4381 accaatagtt gataataaac ccatcactga tacacagcct aatccaatta cagataacaa
     4441 acctgtcatt gaatcgccaa ttgatgacac ccgtccagtt atcattaggc ctacaacacc
     4501 ggtaaatctt catcctgaac ctgtagctgt tggtgtaccc aatgtaggta ttcgatggaa
     4561 tgaccgctct cgtggttaca acattgatga tcctaataac aaacaaaatg ttaagttaac
     4621 tggtgaaggt gttaaagtcg gtatcttaga tagtggtttt aaaaactatt taatgcagga
     4681 cgatatactc aaaaaatttg gtaatcgcgc tgttattatt gaaacagggc gtactgcccc
     4741 ggcttctgca acacatggta ttgaggtcgc agaaatggtt gggggaggga actctcgcaa
     4801 tggagtagcg tctaagtcaa cgttattact tgcggatatt accaaaacaa caaatgcggg
     4861 tacaggatta tccgcaacag ctccaattta ttatgactta tggaataggg gagcccgtat
     4921 ttttaaccaa tcatacggta ttccaaagcc tcttacttat tttaataaca atagaaattc
     4981 tagctattac tatttacacc aatttgatgg taatgtgttg caattctata aggataaagt
     5041 aaaagagggg ggcttatttg tctgggctgc ggggaataac cgtggtgatc ttgatccatc
     5101 actccaagct gggttacctc attatgaagc tgacttggaa aaaggttgga tttctgttgt
     5161 tgcggtagca accagaacta atcagggatt gggtaacttt gaatggagca atttattgcc
     5221 atattctcaa gccggtgtgg caaaaaattg gaccgttacc gcaatgggtg actacatctt
     5281 taatttagga ggtagaaaca ttattgctag tggttcatcc tttgcagctc cagccgttac
     5341 gggtacagca gctctcgtga aacaaaaata tccttggatg gatggtaacc ttatcaaaca
     5401 atctattctc tcgacggcaa ccgatatcgg cgctcctgga gttgatgatg tatatggatg
     5461 gggtttactt aatattgaaa aagccactaa tggccctgcg cgttttggta aacgactcgc
     5521 tttagccgat aacgtgactg taaatattcc aaatggaagc tatgagtttt ccaataatat
     5581 taacggtgat gcaggcttgg tgaaaaatgg ccaaggcgaa ttaattttat cgggtgctag
     5641 tacttttgaa ggggatacaa cactcaatga aggtgctgtc actattaacg gtaaaaaata
     5701 tgtgtctaaa gtaaacgtat ctccaagtgg tacattggtt gtcaataata ccacgttaga
     5761 aaatggcgta aataacgagg gtacagttgt caaccagggt tattctacga ttaagagagc
     5821 ttacgttgct tcagcacaaa gtacgctagt gtcagattta ggttcaaact taaatgtaaa
     5881 aggagaagtt gacttaaacg gctctacttt atcactagct gcggtaaaag agggtaaagc
     5941 tcagtatgtg acccaaaaag gtttatcaat gagtgctatt acttctgatt ccgcaattaa
     6001 gggtaacttt gctgcaatag aaacctcagg gttattaact gcgacggcgg aaaaaaccaa
     6061 tgagaatgaa gtaaaagcaa cagttagccg gaaaaatgtc gcgactgctt tagagagctc
     6121 attttcggca ttggataacc aaattgaagg aaataatggt tctacaaatg ctacaaatga
     6181 tgaattcgca caacaagcgg ctactttaca aaacagtatt gcaaacatca atacgcaaag
     6241 tgtggtttta gatagcttat ctggtcaaat ttatgcgtct gcgcaagcgc ttacttttga
     6301 aaactcagaa acagtgaata aagatctctc taaccgtctt gtaatgttag gaacgctgga
     6361 taatgtaggt gagactgctg gtgtgtgagt aacgggtatt tatgggaatg gtactctaaa
     6421 agaaataggg tttggtgaag gtaaaaccaa tacctatgct ggccaaatag gttttgataa
     6481 gccagttaca gaccatgtga ttttaggtgc ggcacttaat tattctaaag caaaagtgaa
     6541 cttcgatcgt tatggcggta gttcaaaagc agatggaata ggtgcatcat tatatgcccg
     6601 tataggcaat aagcataaaa caccttggta tttacaaggt cgagccggtt atggcagtgt
     6661 tgattcagat gtagagcgtc atattatttt ggcggataat aacgcaagta cagcaaaaat
     6721 caaccaccga gacagagtat tttctgctta tgttgaatca ggctatgact tcaagcaagg
     6781 tcgctttgcg ttaactccat ttgtcggttt tagtcatgat gttgtcagac gtggcgcatt
     6841 cagtgagcaa aacagtcaat ttggtctcac cgcggacaaa gcaacctata aacaaacaag
     6901 cggattgatt ggtttacgaa catctttaga ggtgaattta gctgggatga aaacgacttt
     6961 ccaaggctat gtaaatcatc aaaaagcgtt taatcgagaa gatcttagct ttaaagcaag
     7021 ttatacaggt ttacaagatg caaaattcga cgtaaaaggt attgggcttg caaaacataa
     7081 aacgtgggta gggattggtg cattggcgga agtaaataaa aatacttcct tatatgtgaa
     7141 ttacgacctt aaactcgcaa aaaatagtgg tcacaacaac gttgtgactg ctgggattag
     7201 aattaatttc taactgaatc tttttaaaca aaacgggcgt ttatacgccc gtttttttat
     7261 agttatagag ataataatgt tattttatac ttcatttaat taggcaatct ttacagcttg
     7321 gtaactacac tgtggattaa caatccgatc acgagaagca ataatttgta actcataaag
     7381 ccctgatcta gcggtttgtt ccattacctc attgaccgca tttgcagtgt gttcaaaggc
     7441 ttctagatcg gattttccat ttaataagtt cgccacaaat agccctgcgg ttaaatcgcc
     7501 tacaccgaca ggttctttgg caaattggta gagtgggcgg ctgatgtgcc aaatgccatc
     7561 ttggttggcg aacagcattt caaatttgtt gctctctttg ccgactcggc ttaaatgttt
     7621 aaccaatact tttttcgggc ctttggttaa aatcactttc actgcctcga ccgcttgctc
     7681 aaaattttcc accgttaaac cggttaattc tcttaattcc actaaatttg gtgtgataat
     7741 gtcggcttgt gccattgcca gattgatcaa tccctctttt acgccgtctg ccacaatgca
     7801 gcctttgtcg gggtgtccca ttaccgggtc gcatacataa attgcgtttg gattttccgc
     7861 tttcacttta tgaaaagcct gaataatttc ggctacttgt tctgccgagc cgatatagcc
     7921 agagagtacg gcatcgcaac gatgcagttc accgatattg tgaatgccat caacaatgct
     7981 accgatttgt tcttttggca tcaccatacc gccccatttt ccatattggg tatggttgga
     8041 aaactgtacg gtatttaacg cccatacatc aacacctaac agctgcatag gaaaagttga
     8101 agccttattg ccggcatagc cgtagacaac gtgcgattgt atggatagta tgtttttcat
     8161 tcattcactc ctttaaaatt tcaatatgtg ttgtttttta gtcatttgaa gttgcaagga
     8221 cttgaagctc atcaagaaat ctctataatc ccgcctcgtt ctcttatcca ttcaatatgc
     8281 cgacttagct cagtaggtag agcaactgac ttgtaatcag taggtcacca gttcgattcc
     8341 ggtagtcggc accatcacct ttattttctg atgagtcccc tttaatgtaa aatggcaaga
     8401 ttttgcaaat tttcacaaaa atcttaccgc ttgtagggtg aaattgaatt agacgtaacc
     8461 gtaattcatt aagcgttgat aacggcgttc cagtaaatcc tctttattaa gttgatctaa
     8521 ccctgccaaa tcttcaacaa tacgctgttt aaggttttgg gcgatttgtt caacattgcg
     8581 atgagcaccg cctaagggtt ccggcacgat gttatcaatc agctcaagct cttttaaacg
     8641 aggggcagtt aaacccatta cttctgctgc cgttgaggct ttatcggcac ttttccacag
     8701 aatcgaggca cagccttcag gtgaaattac cgagtaagtt gaatattgca acatattgac
     8761 cttatcgccc acaccgatcg ctaatgcacc gcccgagcca ccttcgccaa ttaccgtaca
     8821 gattactggc acggaaagtt gagacatttc acgcaggtta cgggcaatcg cttctgactg
     8881 accacgctct tccgcaccaa tgcccggata agctcccggt gtgtcgataa aggtgatgat
     8941 tggcatatta aagcgttctg ccatttccat taaacgtaac gctttgcgat agccttcagg
     9001 agcaggcata ccaaagttac gtttcacttt ctcttttacg gtacgacctt tctgatgacc
     9061 gataaccatc accggacgtc cgtccagacg ggcaatacca ccgacaatcg ctttatcatc
     9121 ggcaaaggca cggtcgcctg ccagttcgtc aaattcggtg aaaatatgct caatataatc
     9181 taaagtgtac gggcgattgg ggtggcgtgc catacgggaa atttgccacg catctaaatt
     9241 agcaaaggtt ttcttggtta attcctcgct tttcttttgt aaacgcttga tttcatcatc
     9301 aagattaatt ttgtcatctt gctcgctgac tgctcttaaa gactcgatct tggcttccaa
     9361 ttcagcaatc ggcaattcaa aatctaaaaa ttcttggctc attctatttt cctttttatg
     9421 ggcaaaatta tggggcatta tcgcttatca gtcggttatt gtccattttc aattacgcta
     9481 aattgaccca tcgtacctct atcacgcagc ataaaatcgc tcacgccaaa ggtaaatggc
     9541 agttgctcag gggcagtatt atcaaagcga accaacagcg tgatttcttg ctccgcctcg
     9601 agccaaacgg tgtcccgcca cgcaagttgt ttgatagggt attgcttgcg gtttagggtt
     9661 tcaataatga attttgcacc ttgtagcgta aatccgaccg cttgtgtgct atgtaaatac
     9721 caacgctcaa cgctgccttt ttgcgcggta aaatcaatgc gttttgggtc aaaccgcttt
     9781 tggttgatta aataatcagc cggacgaatg gcaaaacgtc tctcttggct gattttcagg
     9841 ttaaattcct ctaagttgaa agccggtaaa ctcggtttat tattcaatac cgctgccatt
     9901 ccttcagggc gaagctctaa aatcacgtta tcattcaatt cgtcgttgtc agcaaagacc
     9961 tgcccgattt tgtaaaaaat atctcttttt tgaccgctta tcagcgatac cgctttccct
    10021 tcgcttaaat cgaccaacac ttccaccctt tcactcggtg caagttgaac cgattcggtt
    10081 tcaagtggct ctgccagcat tcctaagccg gtggcgatta ggtacaacgg ctgctcgtta
    10141 tctaagcgta attcataagc acgggaaagt gaggcattga cgatccgcaa tctgacccag
    10201 ccacgaggca cgttaaaata aggcgattcc tgcccgttga caaataatcg cttaccgaaa
    10261 aattgtgagg tgtttttatc taacacctgt acgccgtctt tgttgagcag ctggtcttgc
    10321 agaattaacg gaatgtcgtt cacgccatat ttattcggta aagtggcttt tttgctctgt
    10381 tcatcttcaa tcatccacaa gccggctaag ccacgataca cttggaatgc cgagttgagc
    10441 attgtatcgg cgtgatacca acaagtacaa gccggttgat tgatagaaac aatcggcgac
    10501 cagctacttt tggggtcaag ggaacgatgc accgtgccaa tcatctcact tgaggcttgc
    10561 aatccttgaa tattcattga gattttttgc ggtaaattat tgagataagt taatttgaca
    10621 aaatcccccg attttacccg tacggttggg gcaagatatt gcccgttcac accccataca
    10681 tcaaccaatt tgcctttatc aaattgggtt tgtgcggggc gtaaatccaa ccgaaccggc
    10741 tttcctcgcc caatatccat taaaggcgga atgttcagtt gcggtcgctc tgctgctaat
    10801 agcggtgttg gcactgttgc aaatccagcc gcaagggcag agccttgtaa aaattggcgt
    10861 cgggtgatct gttttttcat attaggcgtt ttttgcagtg ttttctaact gttcgacttc
    10921 ttgattaagt tgttcaaatt ttgccaacat aatttgatgg cacttttcca tcagttcttt
    10981 gacgttttca cgggaatagc ctgaagtatc aatcggatca agcatttcac agattactgt
    11041 gccgttattt gaacggttca aatccacttt attgtgtaaa ttagagcaaa ctaccggcac
    11101 aatcggcacg ccggcagaaa tggctaaatg gaatgcaccg gttttaaatg gcagtaaacc
    11161 acgcccacgg ctacgagtac cttccgggaa catccacacc gacacattgc gttctttcac
    11221 gatttgccct gctttattca ttgtttcaat cgcactggaa cgcttttcac ggtgaataaa
    11281 aatattgccg gttgcccagt aaaccaaacc gaaaaacgga atccaaatca ggcttttttt
    11341 gccgatactc accgtctttt ctgccaccat tgaggaaatc gttaccatat cgtaattgtt
    11401 ttgatgattg ccgatataga caaccggata gttaatttcc ggctttttgc gggtaattaa
    11461 ttccaacccg actaatttat gcaaagcacc aaaccaacga gctaccacac ccacgctact
    11521 tgggtgacgt aaacgcagta acgcataaat agtgccaaaa atagaaatga aaatagcggc
    11581 aagggcaaca attaaaatac gaaaaatttt taacataatg gaataacctt aaaaataaat
    11641 tgtctaggag tatagcaaaa taaggttatt ttctaaaggc tatccacatt aaattgatag
    11701 tttcctattt tgcaaaaaat cggtatattt aaaccgcttg tttatttgat aaggagaaaa
    11761 aaatgagtaa agtgacttta gcaggaagcc cgattgatgt tgcaggcaca tttccacaaa
    11821 aaggcgatgt ggttgccgat tttaccttag tcaacagtga tttaagtgat gtttcgcttt
    11881 ccgattttga tggcaaacgc aaagtgttaa atattttccc aagtattgac accggcattt
    11941 gtgccacttc tgtgcgtgtg tttaatcaaa aagcggctga tgtagcgaat acggttgtcc
    12001 tttgtatttc agcggattta ccttttgccc aagcacgttt ctgtggagca gaaggaattg
    12061 aaaatgccaa agtattatcc agtttccgtc atcgtgattt acacaacaaa ctgggggtag
    12121 atattatttc aggtccgttg gcaggcttaa cttcacgttc agtaattgtg ttagatgaaa
    12181 acaacaaggt attacacagc gaattagtgc cggaaattaa acaagagccg gattatgagg
    12241 cggcgttagc ggtattataa tttgcagaat tatgctggaa aataaccgct tgtaaagcaa
    12301 caaaaagccc gttgattcaa ttcaacgggc tttgttttta gtgattattt cttacgagag
    12361 tgtaagcctt ttttctcaag gttacggtaa atcaaccatt gctgtgcaat cgtgattaag
    12421 tttgaggtta accagtaaag cactaagcct gatgggaacc ataagaagaa cacggtaaag
    12481 ataaccggca taaaggtcat tactttttgt tgtaccgggt cagctaccgg tgttggcgac
    12541 attttttgta acaagaacat cgaaccaccc attaataaag gcaaaatgta gtatgggtct
    12601 tgtgccgata agtcttgaat ccagccgaag aaaggtgcgt ggcgtaattc taccgcttcc
    12661 ataaatgtcc aatataaagc aatgaaaatc ggcatttgga ttaaaattgg taagcagcca
    12721 cccattgggt tcactttttc ttctctgtag agtttcatca tctcttggct catacgttgg
    12781 cggtcgtcgc cgaaacgttc acgcatttca gtaatgcgag gttgtaacat acgcattttt
    12841 gccatcgagg tgtattgtgc tttggttaat gggtaaagaa tggttttcac tacaatagtg
    12901 acaccgataa ttgccaagcc ccagttgctt acgatttttt gaattgcggt tagtaaccag
    12961 aaaagcggtt tagcgataaa ccacgcccag ccgtaatcta cggttaagtc taggtgattt
    13021 gctgattcgc ccatttcttt ctgatcttta gaacctgtcc aaagtttgct atttaaatta
    13081 gcctctgaat ttggcgcaat cgtagttaaa gggccacggt aaccgatagt tgctacccca
    13141 ttattggtgc gtgaataaag gctgttatcc gcatcttggt ttggcaccca agcagacacg
    13201 aaatagtgct gtaataccgc aatccaaccc gctttggtgt ccacgcttaa gttggctttt
    13261 tccatatctt ggaaactgta ttttttgtag ttggtttctg aagaagaata agccccgccg
    13321 gtgtaagtcg gcatggttaa attgccggaa ctttcaacta tagagtgttt taattgcccg
    13381 taaggctgaa cttcaatcgc ttgtgcagta ttatttttga tattgaagtt taccccaaca
    13441 tcgtagctac cacgttttag cgtgaaagtt ttggtgtaaa ccacaccctc tttttcaaag
    13501 gttaatggta cagaaatttc attttgccct tcggctaatt tgaagctatc tgccgttacc
    13561 gcatattgtg ggcgaccggc attggtatca atcccgtttt tacccactaa accgctttga
    13621 gcaacgtaga ttttgtcgcc gtcttgctgt aatagtttaa atggcgtgtt agagtgtaat
    13681 tcagcattgt gttttaacaa atctgagccg atgacatcac cgcctaaggt atcaatagtc
    13741 agacgtaata catcgctttc cacggtaatg gttttacctt gcgtgatgct atctgcgatt
    13801 ggattattgg cattggaagc agacggaaga tcacccgctt gttgggtttg tgctgccact
    13861 tgagcttgtt tttgtgcttg aatttcagga tcaaaatctt gttgccattg tgtaaaaatc
    13921 aaaatagaca caagaaataa acccattagc agtaagccac gattattcat gttggaattc
    13981 tcttgttagt aatggataaa aagaaaggta ttttataata ggttagcttg ttttccaaac
    14041 gccttttatg aacaagcggt cggattttcc aagttttttg caaaattttc ggagaatttg
    14101 accgcttgtg gagaataaga aactagcgtt tatctaaggt tttggtggaa aggcgagcaa
    14161 ctgcacacag gttaccttgt tcgtctttaa tgtcgatatt ccaaacctgt acttcacgcc
    14221 ctaatttcag cggtgtagct ttggcaatcg cttttgtgcc tgccggaatc gattttaaat
    14281 ggctgatgtt tagctccatt cccaccgcaa tttgatgggg ttcacacacc attaacgccc
    14341 ctgcattggc agtagtttcc gcgagtgctg ccgatacacc gccgtgcaat acgccaaacg
    14401 gctgttgagt gcgttcgtcc acctgaagct gtgcttcaat ccaatcttca ccgatagcgg
    14461 taaattcaat ccctaagtgt gacaccgccg atttttggct gagtgtgttt aattgttcac
    14521 aagttgctgt ttgcttccaa atggtcatta ttatttcctg tctaataaaa aagctgtcta
    14581 tttagacagc tttcattatc tctttgagcg aaacatacta cgccaatagt acattgtttg
    14641 gtcgcccata ttaccttaag ccatatagca ctaaggaggt gatttatgtg agaaaatcag
    14701 aagttttctt tctggttgcg ttgctaatat tattagcaac ttccgctagc attaaagtac
    14761 tcaccatact tgatgtgcta gtttggttat tcgctagata acctaaaatc agacagaggc
    14821 aggctggtta cctgcctcgc tttttattct aagtactttt aggttacatt tcaaccttaa
    14881 atcacgtcca gcaacgcttg aattgggtgt ttaatgcctt gttgttcaaa acgtttgact
    14941 tgcgagcggc aggagtagcc ggttgctagg caacgctcaa gcggtttatt ttttaattta
    15001 atttgccatg attgctgata aatcgctttc gacatttcaa cgtgtttggt ttcgtgtccg
    15061 aacgtgcctg ccattccaca gcaaccgaca ttttcattga gtaaggtttc accaaaatgg
    15121 gtgaaaatag cttgccactc tttcattgag cttggcaagg cggtggattc ggtgcagtga
    15181 gcaaataaat accacggcaa gcggtcggaa tttgccgatt ttttgcaatt ttccagctcg
    15241 ccgtttttaa tcacttccct taaccattcg tgtgccaata agactttgaa atccccccga
    15301 gcttctttga ggatctcttt gtattcttca cgataaagca aagttaaggc aggatcgaca
    15361 gccaccatcg gtagccccaa tttcgccaca cggtttaaaa aatcggcttg gtttttcgct
    15421 gttttcgcaa atttatgcaa aaagccttta acgtgttgtg ctttaccgct tggcttgaat
    15481 ggcaacacaa tcggcttaaa gcctaatttt ttaatgagag cgataaagtc tgccaccact
    15541 ttggcatcgt aataagaggt aaacggatct tgcacaataa acaaggtttt gcaatttttt
    15601 gcagaaaaat caccgcttgt agcttgttgt tcaaggcttt ctaagctctc gccttggtag
    15661 ccgacttcca ccaactgatg ttgcagattt ggcactgaca atgccggcaa ataggtcatt
    15721 ccaatggttt tgtttgcagc tttttcggca aaagttgagg tgctgaaaaa gttaaaaaaa
    15781 cgtggttgtt tcgccattaa aggggcgata aattctaagt ttgagaccac ataatctttc
    15841 agtggtcgca aatagcggct gtggtaaagc tcgttaaatt gcgatctgaa cgtcggtacg
    15901 tcaattttga ttgggcattg gctggcacag gctttgcagg caaggcaggt gtccatcgcc
    15961 gctttgactt cgtgtgaaaa atcatactct ttgtttttat tgagcgtgtt gcgaattttt
    16021 gcaacaaaat cagctaattt gaccgcttgt ttgcgaggtt tgaagatcaa atcgtccggc
    16081 gaaacgtttt gttcggtaag taatctgagc cattcacgca caagagtagc ccgccctttc
    16141 ggtgagtaaa gacggttgcc cgagactttc attgaagggc acatcgtgct gtgtacatca
    16201 aagttaaaac atagcccgtt gccgttacaa ttcattgctc ctttaaattc ttctcgcact
    16261 tggattggaa tttggcggtc aaaatcggct cgcatttgtg agtcaatcgg gtagagcgag
    16321 gtttcgcttt ctaatggtgt acaaatttta cctgggttca agcgattgta cgggtcaaat
    16381 aaggttttga tgtaacggag ttcttgccac aaagtttcgc caaagaaacg ttcgccgtag
    16441 taagaacgca tacctttgcc gtgttcgccc caaatcaagc caccgtattt ggcggtgagt
    16501 tcgactactt ggtcggaaat ttgcttaaag gtttccactt gggctttgtc gcataagtca
    16561 agagcagggc gaacgtgtag cacgccggca tcaacgtggc cgaacattcc gtaaggcaga
    16621 ttatagcgat ctaataaagc tcgaaattcc acgatgtaat cggcaaggtt ttccggtggc
    16681 acagcggtgt cttctacaaa ggcgatcggt tttgcccagc ctttggcatt gcctagcagg
    16741 cctacggctt ttttccgcat tgcgtagatt ttctcgatag aatttacatc actcgtgagt
    16801 tggtagccga taatcccggc ttcattattt gccatttttt gatcaaggct ttggcagagt
    16861 gctttcactt gggtttcaat ttgagtctga tcgcttgagg catattcaac aatgttaatc
    16921 cctaaaatcg ggttggctgg gtcttcggtt aataaatctg acaccgaatg ccagacgata
    16981 tcttgcttgg caagattgag cactttggaa tcaaccgttt ccaccgataa ggcttttgcc
    17041 tctaacataa aaggagcgga gcgtaaggcg gcatcaaagg aattatattt aatattaatt
    17101 aaggtgcgat atttgggaat cggcagtaaa ttcagtttgg cttcgcaaat aaaggcaagc
    17161 gaaccttcag aaccggttaa aatacgggta aggttaaatt cgctttcacc atggttaaac
    17221 acatttttta aatcatagcc ggtaataaaa cggttaagct gaggcagttc gttcagcact
    17281 ttggggcgta atgttttgca acggttgaaa atttcacggt gcaaggtttt gccgagagcg
    17341 gagagattta acccttcaat atgtgcaaaa aaatcggcag atttgaccgc ttgtgtctct
    17401 aaaatatcgc cgttaataag cacagatttg atggcaagaa tatgatcaga tgttttgcca
    17461 tattgcaaag aaccttgccc agaggcatcg gtgttgatca ttccgcctaa agtcgctcgg
    17521 ttactggtag aaagttcggg ggaaaagaaa agtccatgtg gttttaaaaa ttgattgagc
    17581 tggtctttca ccacgccagc ctgcactcga acccaacgct cttccacatt cagttccaaa
    17641 atctgattca tatggcggga gagatcaaca ataatattat tgttaagaga ttgcccgtta
    17701 gtgcctgtgc caccgcctcg tggagtaaaa gttaaatgtt gatattctgg cttttgggca
    17761 agtttggtta gaattacgac atcagaaacg gatttcggaa acagaatagc ttgcggaatt
    17821 tgctgataca cgctgttgtc tgttgccagt gaaagcctat ctgcataatt tgatgcaatt
    17881 tccccactaa aatgctgatt gacgagttca gttaaatagg attgggtggc tttatccagt
    17941 tgcggtactt cagagagtct aggtatcata agctgtgttt ggttttttat aataaaagca
    18001 ctaaattttg cttatcttag caatttttct aaaaattggg aatggaatat caatttgatt
    18061 aaatagtgtt cgaaaaatgg ttttttggtt
//
LOCUS       DANLXO010000052        17647 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.052, whole genome shotgun sequence.
ACCESSION   DANLXO010000052 DANLXO010000000
VERSION     DANLXO010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17647
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.052"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            151..1284
                     /gene="carA"
                     /locus_tag="PXD69_001446"
     CDS             151..1284
                     /gene="carA"
                     /locus_tag="PXD69_001446"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDL6283643.1"
                     /translation="MFKPAILVLTDGSVFSGKSIGADGHTIGEVVFNTAMTGYQEILT
                     DPSYTKQIVTLTYPHIGNTGINLEDKESPNVCASGLIIRDLPLLHSNFRASSSLSDYL
                     IQQNIVAIADIDTRRLTRILREKGAQAGCILVGDATEENIANALAFANSFGSMAGKDL
                     AQSVTCNELYKWTDGEWQLGKGYVPQQQTEFHVVAYDYGVKHNILRMLAERGCRLTVV
                     PAKTSAEAVLALNPDGIFLSNGPGDPEPCDYAITAIRKLLETQKPIFGICLGHQLLGL
                     AAGGKTKKMVFGHHGANHPVQDLDSQKVLITSQNHGFEVDESSLPSNVRVTHRSLFDG
                     TVQGIELTDRPAFSFQGHPEASPGPNDVAYLFDRFVSEMKKVK"
     gene            1387..4593
                     /gene="carB"
                     /locus_tag="PXD69_001447"
     CDS             1387..4593
                     /gene="carB"
                     /locus_tag="PXD69_001447"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDL6283644.1"
                     /translation="MPKRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     VLVNSNPATIMTDPNMADVTYIEPIEWKTVEKIIEKERPDAILPTMGGQTALNCALDL
                     SKNGVLKKYNVELIGATEDAIDKAEDRGRFKEAMTKIGLNTPKSFVCHSFEEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNRDEFIAICERGFEASPTHELLIEQSVLGWKEYEM
                     EVVRDRADNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAINPANGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLNE
                     LRNDITGGLIPASFEPTLDYVVTKIPRFAFEKFANADDRLTTQMKSVGEVMAMGRTFQ
                     ESLQKALRGLETGICGFNLLSEEPEKIRRELANPGPNRILYVADAFGAGFSLEEVHHY
                     SKIDPWFLVQIQDLVLEELALEKKQFSDLDANEIRRLKRKGFSDKRIAQLTKVSEKMV
                     RDYRHTYAILPVYKRVDTCAAEFASDTAYLYSTYEEECEAKPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHASLALREAGYETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RVENPWGVIVHYGGQTPLKLANALSDAGVNIIGTSADSIDAAEDRERFQQILNTLGLK
                     QPANRTARNALEAVALANEVGYPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSN
                     DSPILLDHFLNNAIEVDVDCICDGENVLIGGIMQHVEQAGIHSGDSACSLPAYSLSGH
                     VLDEIRKQTNAMAFALGVKGLMNVQFAVQNEVVYVLEVNPRASRTVPFVSKATGRPLA
                     KIAARVMAGETLADLNALEEIIPSKFFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGI
                     GNTFAEAFFKAQLGAGERIPKVGKVFMSVIEEHKPALIYIAKRFQEQGYGLCATFGTA
                     NFLRQHGIAVQTVNKVREGRPHIVDAIKNGEIALVINTVSGEPEVIADSHSIRRTALQ
                     QRVPIYTTLAGADAISYGVKHINEFDVYSVQELEQKAN"
     gene            complement(4668..5459)
                     /locus_tag="PXD69_001448"
                     /pseudo
     CDS             complement(4668..5459)
                     /locus_tag="PXD69_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072249.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
     gene            5662..6660
                     /gene="yiaK"
                     /locus_tag="PXD69_001449"
     CDS             5662..6660
                     /gene="yiaK"
                     /locus_tag="PXD69_001449"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HDL6283645.1"
                     /translation="MRVSYEELKAQFKRVLLARNVREEIAEECATVFADTTQAGAYSH
                     GVNRFPRFIQQLENGDIVPEAVPTKVLSLGAIEQWDAHQAIGNLTAKKMMDRAMELAS
                     ENGIGVVALRNANHWMRGGSYGWQAAEKGYIGICWTNALAVMPPWGAKECRIGTNPLI
                     IAVPTNPITMVDMSCSMYSYGMLEVHRLAGRQTFVDAGFDDDGNPTRDPATVEKNLRL
                     MPMGFWKGSGLSIVLDMIATLLSNGESTAAVTEDKDDEYCVSQVYIAIEVDRLIDGKT
                     KDEKLNRIMEYVKTAERADPDVAVRLPGHEFTQILADNKANGIPVDDTVWAKLQAL"
     gene            6785..7150
                     /locus_tag="PXD69_001450"
     CDS             6785..7150
                     /locus_tag="PXD69_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL6283646.1"
                     /translation="MFFGHISQVKANRYPPAIQIALNYLKNTDFDAMEAGVYELKGRQ
                     IYVQVLDLNTKSKHEFQPEVHRNYLDVQYLHRGKEIMAAAVDTGTNPIAMEYNPERDI
                     QYYQSVANENEFRCVEGNF"
     gene            7214..7693
                     /locus_tag="PXD69_001451"
     CDS             7214..7693
                     /locus_tag="PXD69_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL6283647.1"
                     /translation="MKALAQLVGKLLEILVVVILSAMSILVFVNVVLRYGFNSSISVT
                     EEVSRYMFVWLAFLGAVLAFSENQHVKVTMLTDKLSPTARNILSVVTDLAMLFCCYLI
                     VDGSWIQFNLNLNNFAPISGLPQGITFLASTVAGVLIGLLIIARIVATVGVIAKGEK"
     gene            7694..8971
                     /locus_tag="PXD69_001452"
     CDS             7694..8971
                     /locus_tag="PXD69_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HDL6283648.1"
                     /translation="MTVVIFLSVLLGSILLGIPVAFALLVCGVALMLHLDLFDAQILA
                     QQIVSGADSFSLMAIPFFILAGEIMNEGGLSKRIIDLPMKLVGHKRGGLGFVAILAAM
                     IMASLSGSAVADTAAVVAMLLPMMKTTGYPIDRSAGLIGTAGIIAPIIPPSIPFIVFG
                     VASGVSITKLFLAGIFPGIMMGICLAALWWWQAKRLDLMTFSKATKEELCISFKNSIW
                     ALLLPVIIIGGFRSGMFTPTEAGAVATFYALIVSLFVYREMKFKDLYKVVLAAAKTTA
                     VVMFLVAAANVTGWLITVAELPMMLTELLEPLIESPTTLLLVIMLAVFIIGMVMDLTP
                     TVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQA
                     AKGVMPYLVMMICLLLLFVFFPSLVLVPLSWMQ"
     gene            9074..10060
                     /locus_tag="PXD69_001453"
     CDS             9074..10060
                     /locus_tag="PXD69_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL6283649.1"
                     /translation="MKLFNLKTLFALVAGVAVMSGSAMAETSLRFGYEAPRSDTQHIA
                     AKKFDELLAAKTKGEIKLKLFPDSTLGNAQTMISGVRGGTIDIEMSGSPNFTGLEPKL
                     NVIDIPFIFKDREHVYKVLDGEVGQGLLKDLEAQGLKGLAFWDVGFRAFSNSKHPVTK
                     PEDIKGLKVRTNQNPMYIQAFTLLGGNPVPMPLSELYTALETRAVDAQEHPIGIFWSA
                     KLFEVQKHLSLTNHGYTPLIVVMNKAKFDGLAPELQTALVEAAKEAGQFQRDLNVKNE
                     KEIIEKLRKQGIEVIEQVDNAPFKAAIEAEVRKAFVEKHGDELLKKVDALAQ"
     gene            10134..11117
                     /locus_tag="PXD69_001454"
     CDS             10134..11117
                     /locus_tag="PXD69_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL6283650.1"
                     /translation="MKLFNLKTLAAFVAGFALFSTAQAETSFRFAYEAPRSDTQHIAA
                     KKFNDLLQEKSQKGLKLSLFPDSTLGNAQTAISGVRGGTIDIAMSSSSNFTGLEPKLN
                     VIDIPFIFKDRDHAYKALDGEIGQGLLTALEAHGLKGLAFWEVGFRAFSNSKHPITKP
                     EDIKGLKIRTNQNPMYIQAFSILGANPVPMPLSKLYTALETKAVDAQEHPIGIFWSAK
                     LYEVQKYFSFTNHGYTPLIVAINKAKFDALPAEQQTALVEAAKEAGKYQRQLNLENEQ
                     KIIDSLKKAGIEFVDNLDTTPFKDAVSAETRKAFIEKNGDGLVKAIDALAK"
     gene            11248..12732
                     /locus_tag="PXD69_001455"
     CDS             11248..12732
                     /locus_tag="PXD69_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6283651.1"
                     /translation="MQHIIKRFGSHTAVNDVSLDIHSGEIVALLGENGAGKSTLIKIL
                     AGIYDRDEGDILFHNQKIQSAHAIEKGNKKPIAFIHQDLGLIEWMTIAENMAFVMGFP
                     RKFGLIDWAKVREQSQKALDFVGIKLSADTRVFDLSRTEKALLAIARAIAVNAEILVL
                     DEPTASLPASDVEHLFTVLNRLRSQGVGMIYVTHRLDEVIAISDRILVMRDGFPVAEG
                     QTKLYDVKGLVKAIVGEESRGRQRVDLPTDTPEILSLQNVVVGDTGPVNFRLHKGEMI
                     ALAGLRGAGQEEIGRLLFGERTLDKGEIQLDKRSYSAKDPQDAIAKGVALVAGDRTRE
                     SVFMSMTTSENLFINPVLSGHSPLKRYSRREEWGESWYKFQLFDIRPKNLFIDASALS
                     GGNQQKIVLARWMHLNTPVLILEDPTAGVDVGARAEIYDLLNKALAEGVAIIVISTDF
                     EEIAHLCNRALVFNRGEIAGELLNEEVTFANLLALASDSQSKKQ"
     gene            12927..13973
                     /locus_tag="PXD69_001456"
     CDS             12927..13973
                     /locus_tag="PXD69_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6283652.1"
                     /translation="MAQTNIKSTALEQPVSIARDGFMAWFSQMSTRYGLLWLCVLLVI
                     IFSLTTESFASMLTLNAILESKSKIALLALAATTTMIVGKIDLNVGFGIVLWHILVIT
                     LQVQYGFSWYMAILIVLVIAALYGLLNGILVALADIDSFVATLGSGTVLYAVALWHSG
                     GRQIVGDLPDEFIALNSTEIFGIPISAFYVLAVAIVMWLVTEHTPTGRCMYAVGGNPT
                     AARLNGINIKKYTIVPFIVSSVITAFTGVLISAQQGVGQASVGMDYLLPALVGAFLGS
                     TTIRPGRINVWGTVVGIAILAIGISGIQQFGGAFWVEPLFNGATLLLSITIAGYAQRK
                     RLLNQKAVQKKSTN"
     gene            13986..15095
                     /locus_tag="PXD69_001457"
     CDS             13986..15095
                     /locus_tag="PXD69_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL6283653.1"
                     /translation="MKKAFRTTLTAIATLTAIAFGNNAFANDDPFVQEAKQLVAAATA
                     KQEKWDGPTTGPQLQKEKTVIFIASDMKNGGVLGVIDGMKEAVGVTGWKLDVLDGAGT
                     VNNQLAALNQAIARKPDAIVIGGWNPNVAKIPLQKATKNGIKLAAWHATPEPGAIDKY
                     GIFYNVTSDSDEIARLSAMLAVAESNGKAKAIILTDSLYEIALRKANVMKEVIEKCKE
                     CKVLEFIDTPLADTSSRMPNLTFSLLQKYGDDLEYALAINDLYFDFMAPSLRTAGKDK
                     PFSISAGDGSVTAYQRIRNGDKQFATVPEPLNLHGWQLVDELNRAFANEKPSGYITPA
                     HLVTKENVAFDGGENNLYAPQNGYKGAYKAIWGVK"
     gene            15200..16090
                     /locus_tag="PXD69_001458"
     CDS             15200..16090
                     /locus_tag="PXD69_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDL6283654.1"
                     /translation="MSNKFIPKISNPRFNELVGNTFELEELFDKAIWAEGPAWSKPQQ
                     ALYFSDVKGCTMYRWTEQDGTQVFRQPSYFSNGNAFDANDNLITCEHGNRGISLTTPS
                     GEYRFLVGQLDGKRLNSPNDVVVKSDGIIWFTDPPYGILSDNEGKQSPSEIIGCYIYC
                     YDPKTDKLNIATFNTMRPNGLAFSSDEKQLFVADMSSVEFDEDGLHHLVVFDVDGNKL
                     KNRRDVAEISPGIPDGFRIKQNGVIFCSCEEGIIAILPDGTELGRFVLGKLTSNCSFG
                     DDEQTLFITCSNSVYRLTIK"
     gene            16162..17631
                     /locus_tag="PXD69_001459"
     CDS             16162..17631
                     /locus_tag="PXD69_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDL6283655.1"
                     /translation="MDNKMNYTLGIDCGGTFIKAALFDTQGNIQALHRENVSVISEQA
                     GYAERDMSQLWAICAEVVRSTIEKSGVNPADIKAVGISAQGKGAFLLDKQNRPLGRAI
                     LSSDQRSLEIVKQWQAEGIPQQLYPITRQTLWTGHPVSILKWVQQNEPERYAQIGAVL
                     MSHDYLRFCLTGELHCEETNISESNLYNMEKGEYDQQLADLLGMPDVLEKLPPVIEPN
                     KISGYVTENAAKLTGLAVGTPIVGGLFDVVSTARCANLDDETKLNAVLGTWSVVSGIT
                     DHIDASQSLPFVYGRYAEAGKFIVHEASPTSAGNLEWFVNQWKLDYVKINQAVAQLPP
                     AASSVLFVPFLYGSNAGLGMQAGFYGMQAHHTQAHLLQAIYEGVLFSLMSHLNRMFIR
                     FPKADVLRVTGGPVKSKVWMQMLADLTGMRLEIPQMEETGCLGAALMAMQGVGLDISQ
                     VQALNNEMQVFEPNPENYAAYQTKYQRYQKLTEALNTMI"
BASE COUNT         4956 a         3864 c         4148 g         4679 t
ORIGIN      
        1 ttcacttccg agtagaaaat gaaataaaaa aagaagaaag aaataggcaa aataactaat
       61 ttttacttga atgcaaacgt ttgcttgatt aaacttagtc gcctacttct aaggctacac
      121 agataaaatt tgatgattag gagtaaaaca atgttcaaac cagcaattct ggttctcact
      181 gacggttctg tcttttccgg caaatccatt ggtgctgacg gtcacactat cggtgaagtg
      241 gtatttaaca ctgcgatgac cggttatcaa gaaatcctta ccgatccttc ttatactaaa
      301 caaatagtca ccctgactta cccccacatt ggcaataccg gcattaattt agaagataaa
      361 gaatccccca atgtttgtgc ctccggctta attattcgtg atcttcctct tctccatagc
      421 aacttccgtg cgtcctcctc actttcagat tatctcattc aacaaaacat tgtcgctatt
      481 gccgatattg atacccgccg tttaacccga attttacgcg aaaaaggggc acaagccggt
      541 tgtattttag taggcgatgc cacagaagag aatattgcta acgctttggc atttgccaac
      601 agtttcggtt ctatggctgg gaaagatttg gctcaaagtg tcacctgcaa tgaattatat
      661 aaatggacag atggtgaatg gcaattaggt aaaggttatg taccgcaaca acaaaccgag
      721 ttccacgtag ttgcctatga ttacggtgta aaacacaaca ttttgcgaat gcttgccgaa
      781 cgaggctgtc gcttaaccgt tgtgccggca aaaacctctg ctgaagctgt gcttgcgtta
      841 aatccggacg gtattttcct ttctaacggc ccgggggacc cggagccgtg cgattatgcc
      901 attaccgcaa tccgaaaatt attggaaacg caaaaaccca ttttcggcat ttgcttaggg
      961 catcaacttt taggtttagc ggcaggcggt aaaaccaaaa aaatggtgtt tggtcatcac
     1021 ggagctaatc acccggtaca agatttagac agccaaaaag tgctcatcac cagccaaaac
     1081 cacggttttg aagtagatga atccagctta ccatctaatg tgcgagtgac tcaccgctca
     1141 ctgtttgacg gcacggtgca ggggattgaa ctcactgata gaccggcgtt ttcgttccaa
     1201 ggtcacccgg aagccagccc ggggccgaat gatgttgcct atttatttga ccgatttgtc
     1261 agtgagatga aaaaagtgaa gtaaggacgt acctatgtgt gtccatcaag cggtcgaaat
     1321 ttgcaaaaaa cttaccaaaa atgaccgctt gtagcctgaa ataaacgaga taaaagagag
     1381 cccaaaatgc caaaaagaac agacataaac actatcctaa ttatcggtgc cggtccgatt
     1441 gtgatcggtc aagcgtgtga atttgactac tccggagccc aagcgtgcaa agcgttgcgt
     1501 gaagaagggt ataaagtggt gttggtgaac tccaaccctg caaccattat gaccgacccg
     1561 aatatggcag atgtgactta cattgagccg attgaatgga aaacggttga aaaaatcatt
     1621 gaaaaagaac gccctgatgc cattttaccg actatgggcg ggcagacagc gttgaactgt
     1681 gccttagatc tttcgaaaaa cggtgtgctg aaaaaatata atgtagagct gatcggagct
     1741 accgaagacg cgattgataa agccgaagat cgtggtcgtt ttaaagaagc aatgactaaa
     1801 atcggcttga atacgccaaa atcattcgtt tgccacagtt ttgaagaggc cttagcagca
     1861 caagagcagg ttggctttcc aaccctgatt cgcccctctt tcacgatggg aggctccggc
     1921 ggtggtattg cttataatcg agatgaattt atcgccatct gcgaacgtgg ttttgaagcc
     1981 tcgcctactc acgaattact gattgaacaa tccgtactag gctggaaaga gtatgaaatg
     2041 gaagttgtgc gtgaccgtgc cgataactgc attatcgtct gctcgattga aaacttcgac
     2101 ccgatgggtg tacacaccgg cgactccatt accgttgctc cggcacaaac gctaaccgat
     2161 aaagagtatc aaattatgcg taacgcttcg ctggcggtat tgcgtgagat cggcgtggac
     2221 accggcggtt caaatgtgca atttgcgatt aaccctgcaa acggcgagat gatcgtcatt
     2281 gaaatgaacc ctcgtgtgag ccgttcttct gcactcgcat ctaaagccac cggcttcccg
     2341 attgccaaag ttgcggcgaa attggctgta ggctacacac tcaacgaatt gcgtaacgac
     2401 atcaccggag ggctgattcc ggcttcattc gagccgactt tagattatgt tgtgaccaaa
     2461 attccacgct tcgcctttga aaaatttgcc aatgcagacg accgattaac cactcaaatg
     2521 aaatcggtag gcgaagtaat ggcaatggga agaaccttcc aagagagttt acaaaaagcc
     2581 ttgcgaggct tggaaaccgg catttgcggc tttaacttgc tttccgaaga gcctgaaaaa
     2641 atccgccgtg aacttgccaa ccccggacca aaccgtattt tgtatgttgc cgatgccttt
     2701 ggagcaggct tttcattgga agaagttcac cactattcta aaatcgaccc gtggttcttg
     2761 gtgcaaattc aagacttagt acttgaagaa ttagcgttag agaaaaaaca gtttagcgat
     2821 ctagatgcta acgaaatccg ccgcttaaaa cgcaaaggct tctcagacaa acgtatcgca
     2881 cagcttacca aagtcagcga aaaaatggtg cgggattacc gccatactta cgctattcta
     2941 ccggtgtata aacgggtaga tacctgtgca gccgagtttg cctcagatac ggcttacctc
     3001 tattctactt acgaggaaga gtgtgaagcc aaaccgtctg atcgcaaaaa agtgatgatt
     3061 ttaggcggcg gaccaaaccg tatcgggcag gggattgaat ttgactactg ctgcgttcac
     3121 gcctcgcttg ctctgcgtga ggcaggttat gaaaccatta tggtgaactg caaccctgaa
     3181 accgtttcca ccgatttcga cacctccgac cgcctctatt tcgagccgct aacattagaa
     3241 gatgtactgg aaattgtgcg tgtagaaaac ccgtggggcg tgattgtgca ttacggcggt
     3301 caaacaccac tgaaattagc gaatgcctta tctgatgccg gtgtaaacat tatcgggact
     3361 tccgccgaca gcattgatgc cgccgaagac cgtgaacgtt tccaacaaat tctaaacact
     3421 ctcggtttaa aacagccggc aaatcgcacc gcccgtaatg cgttggaagc ggtggcattg
     3481 gcaaatgaag taggctatcc gctggtggtt cgcccatctt atgtgctagg tggtcgggca
     3541 atgcaaattg tgtataacga tgaagagcta aaccgctata tgcgtgaagc ggtatcggtt
     3601 tccaacgaca gcccgatttt actcgaccac ttcctcaata atgcgattga agttgatgtg
     3661 gattgcattt gtgacggcga aaatgtactc attggcggca ttatgcaaca cgttgagcaa
     3721 gccggtattc acagtggcga tagtgcctgc tcactacctg cctattcgtt aagcggtcat
     3781 gttttggacg aaattcgcaa acaaaccaac gcaatggcgt ttgctctcgg tgtgaaaggc
     3841 ttgatgaacg tacaatttgc agtacaaaat gaggtcgttt atgtgttgga agttaaccct
     3901 cgagccagcc gtactgtacc gtttgtcagc aaagctaccg gtcgcccact ggcaaaaatc
     3961 gctgctcgcg tgatggctgg tgaaaccctt gccgacttaa atgcattaga ggaaattatc
     4021 ccaagcaaat tcttcgttaa agaagcggta ttcccattca tcaaattccc gggtgtggat
     4081 accattctcg ggcctgaaat gcgttctacc ggcgaagtga tgggcatagg taataccttt
     4141 gctgaagcgt tcttcaaagc acaactgggt gccggtgaac gaattccaaa agtcggcaaa
     4201 gtgtttatgt cggttattga agagcataaa cctgctttaa tttacattgc caaacgtttc
     4261 caagaacaag gctacggttt atgtgccacc ttcggcactg caaacttcct acggcaacac
     4321 ggaattgcag tccaaacggt aaacaaagtt cgtgaagggc gaccgcatat tgtcgatgcg
     4381 atcaaaaacg gcgaaattgc gttggtaatc aacaccgtca gcggcgagcc tgaagtgatt
     4441 gccgacagcc actctatccg ccgtaccgcc ttgcaacaac gtgtgcctat ttacaccacc
     4501 cttgcaggtg ctgatgctat ctcctacggc gtaaaacata tcaatgagtt tgatgtgtat
     4561 tcagtgcagg aattagaaca aaaggctaac taaaataaag ctaaaatgac aagcggtcag
     4621 attttgcaaa ttttttacaa attctgaccg cttgtgtttg tagaggatta tttagtaaat
     4681 ttatatgcta aatcattcca gcgtaattca tttttgagtt gtggtagctc ggtattttgg
     4741 ttgatatgga taaactcaat accaaaatat tcagcgaaca ttcgtagcat atcggcatca
     4801 atatctaaac taaatacact atgatgagca ccgccggcta gaatccatgc ttgagtacct
     4861 acataaaaat ttggttgaag cttccaaaaa gcatgcccaa ctggtaaatt tggcattgga
     4921 tttggtgagg cgatagcgtc taaatccgca acaaccattc taaaacggtc tcccatatct
     4981 acaacggttg cattcactgc ttttcccgcc ttactactga aaattaagcg aacaggatct
     5041 gccttaccgc caatacctag cggtcgaatg gctaatgttg atttctcttt ggcaatagac
     5101 ggacaaactt caagcatatg agcccccaat accacttggt tttgttcatc taaatcatag
     5161 gtgtagtctt ccataaagga agaaccgttt ggtaagccat aacccatcac tttcacttca
     5221 cgcacaagag ctgcggtttt ccaacctcct tcaccaccaa atccgtagcc ttgttccatt
     5281 aaacgctgaa cagccaagcc cggtaattgt ttaatcccat ttagattttg gaaattatca
     5341 gtaaaagctt taaatccacc attatctaag aatgttttta agccgatttc aatacgagca
     5401 gaatatgcga gagattctct tgctgaacca ttttcttgca agctatcctc aacattatac
     5461 aagcggtcag attttgcaaa aaaatgaccg cttgttgcca tttctaaagt gtgatctacc
     5521 tctcaaattt acaaaatttt ttataacata ttgatttaaa atgtttttta tatttttcct
     5581 ttaattgact ttaatttgtc ttaagagtaa cttataaaac gtgattttac tatttgaaat
     5641 attgaggtat tcaagatgac tattcgagtt tcctatgaag aattaaaagc tcaatttaaa
     5701 cgtgttctgt tggctcgcaa tgtgcgtgaa gagattgccg aagagtgtgc cactgtgttt
     5761 gccgacacca ctcaagcggg tgcttattca cacggggtaa accgtttccc acgctttatt
     5821 cagcagttag agaacggtga tattgtgccg gaagccgtgc cgactaaagt gctttcactg
     5881 ggggcgattg agcagtggga cgctcaccaa gccatcggta acttaaccgc aaaaaaaatg
     5941 atggacagag caatggagct tgcatctgaa aacggcatcg gcgtagtggc gttacgtaat
     6001 gcaaaccact ggatgcgtgg cggttcttac ggatggcagg cggcagagaa aggctatatc
     6061 gggatctgct ggacgaacgc ccttgcggta atgccgcctt ggggggcgaa agagtgccgt
     6121 atcgggacta acccgttaat cattgcggtg ccgactaacc caatcacgat ggtggatatg
     6181 tcttgctcaa tgtactcata cggaatgttg gaagtgcatc gccttgctgg tcgtcaaacc
     6241 tttgtcgatg ctggttttga tgatgacggc aacccaaccc gtgatccggc aacggtcgag
     6301 aaaaacctcc gtctaatgcc gatgggcttc tggaaaggtt cgggcttatc gattgtgtta
     6361 gatatgatcg ccaccttgct ctctaacggt gaatccactg cggcagtcac cgaagataaa
     6421 gacgatgaat attgcgtgtc gcaagtttat atcgctattg aagtggatcg cttaattgac
     6481 ggcaaaacca aagacgaaaa actcaaccgt attatggaat atgtgaaaac cgcagaacgt
     6541 gccgaccctg atgtggcagt acgtttaccg ggccacgagt tcacccaaat tctagccgat
     6601 aacaaagcca acggcattcc ggtggatgac accgtttggg cgaaattaca ggcgttgtaa
     6661 ttgcaaattg accggtaggg tgggcgtaag cccacgcatt agacacaatc ataagatgac
     6721 gtgggcttac gcccacccta caagcggtca tttttccgca gaattttaca aaacggaggt
     6781 atgaatgttt tttggtcata tttcacaagt taaagcgaat cgatacccgc cggcgatcca
     6841 aattgcgttg aactatctga aaaataccga ttttgatgcg atggaagcag gggtttacga
     6901 actcaaaggc agacaaattt atgtgcaggt gttggatttg aacaccaaat cgaaacacga
     6961 atttcagccg gaagtgcatc gcaattacct cgatgtgcag tatctacacc gaggcaaaga
     7021 gataatggct gcggcggtgg ataccggcac caatccgatt gcgatggaat acaaccctga
     7081 gcgggatatt caatattatc aatccgttgc caacgaaaat gaatttcgct gcgttgaagg
     7141 caatttttga cggcacggaa accattcgca aagtggtggt aaaaattgcg atgagcgaaa
     7201 ttgaggagca acgatgaaag ccttagctca attagtcgga aaactgttag aaatcttggt
     7261 ggtggtgatt ttatccgcaa tgtcgatttt ggttttcgtc aatgtggtac tacgttacgg
     7321 ttttaacagc agcattagcg tgaccgaaga ggtgtctcgc tatatgtttg tttggttggc
     7381 gtttttaggg gcggtgttgg catttagcga aaatcaacac gttaaagtca caatgctgac
     7441 cgataaatta tcgccaacgg ctcgtaatat cttaagcgta gtcacagatt tagcgatgtt
     7501 gttctgttgc tacttaattg tggacggtag ctggattcaa tttaacctca acctgaataa
     7561 ctttgccccg atttcaggct taccgcaagg catcactttc cttgccagca cagtggcagg
     7621 ggtattaatc ggtttattaa ttattgcccg cattgtggca acggttggcg tgattgcaaa
     7681 aggagaaaaa tagatgactg tggtaatttt tctttccgtc ttgcttggct cgattttatt
     7741 gggcattccg gtagctttcg ccctgttggt ctgcggtgtg gcgttaatgt tgcatttaga
     7801 tctgttcgat gcccaaattt tggctcaaca aattgtgagc ggtgcagaca gtttctcgct
     7861 aatggcaatt ccgttcttca ttcttgccgg tgaaattatg aacgagggcg gtctctccaa
     7921 acggattatc gacctgccga tgaaattagt cggtcataaa cggggcggtt taggttttgt
     7981 agcaatttta gcggcgatga ttatggcaag cctttccggt tcggcggtgg cggataccgc
     8041 agcggtagtc gcaatgctac tgccgatgat gaaaaccacc ggttatccga ttgaccgctc
     8101 tgccggttta atcggtacgg cagggattat cgccccaatc attccgccaa gcattccgtt
     8161 tatcgtattt ggtgtggcta gtggcgtgtc cattaccaaa ctgttcttag ccggtatttt
     8221 cccgggcatt atgatgggga tctgcttggc tgccctttgg tggtggcagg caaaacgttt
     8281 ggatttaatg accttctcca aagcgaccaa agaagaactt tgcatttcat ttaaaaacag
     8341 tatttgggcg ttattgttgc ctgtcattat tatcggtggt ttccgctcgg gaatgttcac
     8401 cccaaccgaa gcgggtgcgg tcgcaacttt ctatgccttg attgtttcac tgtttgttta
     8461 ccgtgaaatg aagttcaaag atttatacaa ggtagtgttg gcggcagcga aaaccacggc
     8521 agtagtgatg ttcttagtgg cagcggcaaa tgtgaccggc tggctgatta ccgtagcgga
     8581 attaccgatg atgctcaccg agctgttaga gccgttaatt gaaagcccga ccacactctt
     8641 attggtgatt atgttagcgg tgtttattat cggaatggtg atggacttaa ccccaaccgt
     8701 gctgatttta acgccggtat taatgccgtt ggtggaagag gcaggcattg acccggttta
     8761 cttcggtgtg ctgtttattc ttaacacctc catcggcttg attacaccac cggtcggcaa
     8821 cgtgctaaac gtgattaccg gcgtgtcgaa actgccgttc gaccaagcgg ctaagggcgt
     8881 aatgccttac ctcgtaatga tgatttgttt actactgttg ttcgtgttct tcccgtcact
     8941 ggtgttagtg ccgttaagct ggatgcagta atggtttgaa ccgaaacaag cggtcgaatt
     9001 gacgcaaaaa tttgcaaatt tttttggcaa aacagaccgc ttgcaactca atttttaatc
     9061 acaggagaac cctatgaaat tatttaattt aaaaacctta tttgccttag tggcaggcgt
     9121 tgcggtaatg agcggctctg caatggcaga aacctcactg cgttttggtt atgaagcccc
     9181 acgttccgat acccaacaca tcgccgccaa aaaattcgat gaattattgg cagcaaaaac
     9241 caaaggtgaa attaaattaa aactgtttcc ggacagcacc ttaggtaatg ctcaaacgat
     9301 gatcagcggc gtgcgtggcg gtactatcga cattgaaatg tccggctcgc caaactttac
     9361 cggcttagag ccaaaactaa atgtgattga tattccgttt attttcaaag atcgtgaaca
     9421 cgtttacaaa gtattagacg gcgaagttgg tcaaggctta ttaaaagatt tagaagccca
     9481 aggcttaaaa ggcttagcct tctgggacgt tggcttccgt gctttctcca actcaaaaca
     9541 ccctgtgacc aagccggaag acatcaaagg cttaaaagtc cgcaccaacc aaaacccgat
     9601 gtacattcaa gccttcacct tactaggcgg caacccggtg ccaatgccac tttctgagct
     9661 ttacaccgca ctcgaaaccc gtgccgttga tgcccaagaa cacccaatcg gcattttctg
     9721 gtcggcaaaa ctgtttgaag tacaaaaaca tttaagttta accaaccacg gctacacccc
     9781 gttaatcgtg gtgatgaaca aagcgaagtt tgacggctta gctcctgaat tacaaaccgc
     9841 attagttgaa gccgcaaaag aagccggtca attccaacgt gatctcaacg tgaaaaacga
     9901 aaaagagatc atcgaaaaat tacgcaaaca aggcatcgaa gtgatcgaac aagtggataa
     9961 cgccccgttc aaagcagcga ttgaagcgga agtccgcaaa gctttcgtgg aaaaacacgg
    10021 cgatgaatta ttgaaaaaag tggatgcgtt agcacagtaa ttgactttat tttagtctaa
    10081 agctccctcc gtttgggggg agttgttgta tagactctac tataggagag actatgaaac
    10141 tgtttaattt aaaaacttta gccgctttcg ttgccggttt tgcactgttt tcaaccgcac
    10201 aagcagaaac ctcattccgc tttgcgtatg aagctcctcg ttctgatact caacatattg
    10261 cagcgaaaaa atttaatgat ttgctgcaag aaaaatccca aaaagggctg aaattaagcc
    10321 tcttccctga tagcacgctc ggcaacgcac aaacggcgat tagcggtgtg cgtggcggta
    10381 ctattgatat tgcaatgtcc agctcctcta actttaccgg gttagaacca aaactgaatg
    10441 tgattgatat tccgtttatt ttcaaagaca gagaccacgc ctataaagcc ttagatggag
    10501 agattggtca aggtttatta accgcattag aggctcacgg tttgaaaggg ttggcgtttt
    10561 gggaagttgg tttccgagcg ttttccaact ccaagcaccc gatcaccaaa ccggaggata
    10621 ttaaaggctt aaaaatccgt actaaccaaa acccgatgta tattcaagcc ttctctattt
    10681 taggtgcaaa tccggtgcca atgccgcttt ccaagcttta cactgcactg gaaaccaaag
    10741 cggttgatgc ccaagaacac ccaatcggca ttttctggtc ggcaaaactc tatgaagtac
    10801 aaaaatattt cagctttact aaccacggtt acaccccgtt aattgtggcg attaacaaag
    10861 cgaaatttga tgcactgcca gccgagcaac aaaccgcatt agttgaagcg gcaaaagaag
    10921 ccggaaaata ccaacgccaa cttaacctag aaaatgagca gaaaattatc gactcgctca
    10981 aaaaagcagg tattgaattt gtggataact tagataccac accgttcaaa gatgccgtat
    11041 cggctgaaac ccgcaaggca tttatcgaga aaaacggtga tggcttagtt aaagccattg
    11101 atgcattggc gaagtaaaaa tagagctaca aagtgctcgg ttaaactaac ctcacacgaa
    11161 tcgtgtgagg tacaagcggt caaaatccgc aaaattttta cacatctttc ctcaaaggag
    11221 gaacaaatgg cacagcccat tttaagtatg cagcacatca tcaaacgctt tggtagccat
    11281 acggcggtga atgatgtcag ccttgatatc cactcaggcg agatcgttgc cttactcggt
    11341 gaaaacggtg caggtaaatc gaccctaatc aaaatccttg ccggtattta tgaccgtgac
    11401 gagggtgata ttcttttcca taaccaaaaa atccaatctg cccacgctat tgagaaaggc
    11461 aacaaaaagc ccatcgcttt tatccaccaa gatttaggcc taatagaatg gatgacgatt
    11521 gccgaaaata tggcatttgt aatggggttc cctcgcaaat ttggcttgat tgactgggcg
    11581 aaagtgcgag agcagtcgca aaaagccctt gattttgtag gcattaaact ctctgccgac
    11641 actcgagtgt ttgatttaag ccgtaccgaa aaagccttac tcgccattgc ccgtgcgatt
    11701 gccgtcaatg cagaaatctt ggttttagac gaacctactg cttccctacc tgcctctgat
    11761 gtagagcatc ttttcactgt gttaaaccgc ttacgttccc aaggtgtggg aatgatttat
    11821 gtgacccacc gtttagatga agtgatcgcc atttccgacc gcattttggt gatgcgggac
    11881 ggtttcccgg ttgcagaagg gcaaaccaag ctctatgacg tcaaaggctt ggtcaaagcg
    11941 attgtaggcg aagagagccg tggcagacag cgggtggatt taccaaccga tactcctgaa
    12001 attttaagcc tgcaaaatgt cgtggttggc gacaccggcc cggtgaattt ccgtctgcac
    12061 aaaggtgaga tgattgccct tgccggcttg cgtggagcag ggcaggaaga aatcggccgc
    12121 ttattatttg gggagcgaac cttagacaaa ggcgaaattc agttagacaa gcggtcatat
    12181 tctgctaaag atccgcaaga tgcgatagcc aaaggtgtgg cattggttgc gggagaccgc
    12241 acccgtgaaa gcgtgtttat gtcaatgact accagtgaga acctgtttat caacccggta
    12301 ctaagcggtc attcaccatt aaaacgctac tcccgccgtg aagagtgggg tgagagctgg
    12361 tacaaattcc aactattcga tattcgtccg aaaaatttgt ttattgatgc cagtgcgtta
    12421 tccggtggta atcagcagaa aatcgtgttg gcacgttgga tgcacctcaa tacgcctgtt
    12481 ctgattttag aagacccgac tgccggcgtg gatgtaggag caagggcaga gatttacgac
    12541 ttgctcaaca aagcccttgc agaaggggtc gcaattattg tgatttccac cgactttgaa
    12601 gagatcgctc atttgtgtaa ccgagcatta gtcttcaacc gaggggaaat tgccggtgaa
    12661 ctactgaacg aagaggtgac tttcgccaat ttgctggcgt tggcatcgga tagtcagtcg
    12721 aaaaaacaat aacttactct cgcccgcttg cgggagagag acagctaaaa atagcgtcag
    12781 gctattttta gcagagagag ggtaaacaag cggtcatttt tcttaaaaaa tattgcgaac
    12841 cctctccctc cgaaagccta acggctttct cctccctctc ccgcaagcgg gcgaggggaa
    12901 aatgcagaat tttaacggag taatttatgg ctcaaacaaa catcaaatca accgcactgg
    12961 aacaaccggt atctatcgcc cgtgacggtt ttatggcatg gttttcacaa atgtccactc
    13021 gttatggctt actgtggtta tgtgtgttat tggtgattat tttctcactt accaccgaat
    13081 ctttcgcctc aatgctgaca ttaaatgcga ttttagaaag taaatcgaaa attgccctac
    13141 ttgctttggc agccacaact acaatgattg tcggcaaaat cgacctgaac gtgggtttcg
    13201 gtattgtgtt gtggcacatt cttgtgatta ctctgcaagt ccaatacggc ttctcgtggt
    13261 atatggcgat cttaatcgtg ttagtgattg ccgctcttta cggcttgctg aatgggattt
    13321 tagttgctct tgctgatatc gatagctttg tggcaacact tggctcaggc acagtgcttt
    13381 atgccgtagc actctggcac tcgggcggtc gccaaattgt cggggattta cccgatgaat
    13441 ttatcgcact caacagcaca gaaattttcg gtatcccgat ttctgctttc tatgtgctgg
    13501 cagtggctat cgtaatgtgg ttggtgacag aacatacccc gaccggtcgt tgtatgtatg
    13561 cggttggtgg caacccaacg gcagctcgcc taaatggtat caatattaaa aaatacacca
    13621 ttgtgccgtt tattgtctct agtgtaatca ctgctttcac aggcgtattg atctctgctc
    13681 aacaaggcgt tggtcaggca agtgtcggta tggactactt actgcccgca ttggttgggg
    13741 cattcttagg gagtaccact attcgcccag ggcgtattaa cgtatgggga acagtggtgg
    13801 ggattgccat tcttgccatc ggtatttcag gtattcaaca attcggtgga gcgttctggg
    13861 ttgagccact ctttaacggt gcaacactgt tactttccat cactattgca ggctatgccc
    13921 aacgcaaacg cttgttaaat caaaaagctg tacagaaaaa atcgaccaac taagaggatt
    13981 tgattatgaa aaaagcattt cgtacaacct taactgcaat cgcaacctta actgctattg
    14041 ctttcggaaa taatgcgttt gccaatgacg acccgttcgt acaagaagca aaacagcttg
    14101 tcgcagcagc tacggctaag caagaaaaat gggacggacc gacaaccggc cctcaattac
    14161 aaaaagagaa aactgtgatt tttattgcct ctgatatgaa aaacggtggt gtacttggtg
    14221 tgattgacgg aatgaaagaa gctgttggcg taacgggctg gaagttagat gtattagacg
    14281 gtgcaggtac ggtaaacaac caactcgccg cacttaacca agcgattgcc cgcaaaccgg
    14341 atgcgattgt gattggtggc tggaacccga atgtggcgaa aatcccacta caaaaagcga
    14401 ctaaaaacgg cattaaactt gcagcttggc acgcaacacc ggagccgggt gcgattgata
    14461 aatacggcat tttctacaac gtgacctctg actcagacga aattgcacgc ttatcggcaa
    14521 tgcttgcggt ggcagaatct aacggtaagg caaaagcgat tattttaacc gactcgctat
    14581 atgaaattgc gttacgcaaa gcgaacgtca tgaaagaagt tatcgaaaaa tgtaaagagt
    14641 gtaaggtgtt agagtttatc gacacgccat tggcggatac ctcaagccgt atgcctaacc
    14701 tcactttcag cttactgcaa aaatatggcg acgatttaga gtatgcgttg gcaattaacg
    14761 atctctactt tgactttatg gctccgtctt tacgcaccgc tggtaaagat aaaccgttta
    14821 gcatttccgc aggtgatggc tcagtaacgg cttatcaacg tattcgcaat ggtgataaac
    14881 agtttgcaac cgtccctgag ccacttaact tacacggctg gcagttagtc gatgagctaa
    14941 accgtgcttt cgctaacgaa aaaccgtctg gttatatcac accggctcac ctagtgacta
    15001 aagaaaatgt ggcgtttgac ggtggtgaaa acaacctgta tgccccacaa aacggttaca
    15061 aaggcgctta caaagcgatt tggggcgtga agtaatgacg taggggcaaa taaatatttg
    15121 cctcgaacaa gcggttgttt tttgcaaaga ttttgcgaaa tttaaccgct tgtcataaaa
    15181 aatagagagg gtaatacaaa tgagcaataa atttatcccc aaaatctcca accctcgttt
    15241 taatgagctg gttgggaata cgtttgaact tgaagagctt tttgataagg caatctgggc
    15301 agaagggccg gcgtggagca agccacaaca agccctctat tttagtgatg taaaaggttg
    15361 cacaatgtac cgctggacag agcaagatgg tacacaggtt ttccgccagc cgtcttattt
    15421 ttctaacggc aatgcgtttg atgcaaacga caacttgatt acctgtgaac acggcaatcg
    15481 aggtatcagt ttaaccacgc caagcggtga atatcgtttt ttggtcggtc aattagacgg
    15541 aaaacgactg aactcaccca atgatgtggt ggtaaaatca gacggcatca tttggttcac
    15601 tgatccacct tacggtattt tgtcggataa cgaaggcaaa cagtcgccaa gcgaaattat
    15661 cggttgttat atttactgct atgatccgaa aaccgacaag ctgaatattg caactttcaa
    15721 cacgatgcga ccaaacggct tggccttctc gtcagacgaa aaacaactct ttgtggcaga
    15781 tatgtcgagc gtggaatttg acgaagatgg cttacaccac ttagtcgtat ttgatgtgga
    15841 cggtaataaa ctaaaaaatc gccgagatgt ggcggaaatt agtcccggca ttccggacgg
    15901 cttccgaatt aaacaaaacg gcgtaatttt ctgctcttgt gaagagggaa ttattgctat
    15961 tttacctgac ggcacggagc tgggacgatt tgtgctgggt aagctaacct caaattgtag
    16021 ctttggcgat gatgaacaaa cactgtttat tacttgttcg aatagcgttt atcgtttaac
    16081 aattaaatag cagaatgcat taagtgcgtc tgttgtagca ttacaagcgg tttctttttc
    16141 aaaatttttt acaaacaaat aatggataac aaaatgaact acacactcgg cattgattgc
    16201 ggtgggactt ttatcaaagc cgctcttttt gatacacaag gtaatattca agcccttcat
    16261 cgtgaaaacg tttcggtaat cagtgaacag gcaggttatg cagagcgtga tatgtcacaa
    16321 ctctgggcta tttgtgcgga agtagtgcgt tcaaccattg aaaaaagtgg ggtaaaccca
    16381 gcggatatta aagcagtagg gatttccgct caaggcaaag gggcgttttt actggataag
    16441 cagaatcgac cgttggggcg tgcgatttta tcttccgacc aacgttccct tgagattgtt
    16501 aaacaatggc aggctgaagg cattccgcaa caactttacc cgattacccg ccaaactctt
    16561 tggacaggac accctgtgtc gattttgaag tgggtgcagc aaaatgaacc ggagcgttat
    16621 gcacaaatcg gggcggtgtt gatgtcgcac gactatttgc gtttttgctt aaccggtgag
    16681 ttgcattgcg aagagaccaa catttccgaa agcaatcttt acaatatgga aaaaggcgaa
    16741 tacgaccaac agttagccga tttgttggga atgccggatg tgttggagaa attaccacca
    16801 gtgattgaac cgaataaaat ttcgggatat gtgactgaaa atgccgccaa attaaccggt
    16861 ttagcggtgg gtacgccgat agtcggtggc ttgtttgatg tggtttctac cgcacgttgt
    16921 gccaatttag atgacgaaac caaactgaat gcagtgctgg gaacgtggtc ggtggtgagc
    16981 ggcattaccg atcatattga tgcaagccaa tcattacctt ttgtttatgg gcgttatgcc
    17041 gaggcaggga aatttatcgt ccacgaagca agcccgactt ctgccggtaa tttagagtgg
    17101 tttgtgaatc agtggaaact cgattatgtg aaaatcaacc aagctgttgc ccaattaccg
    17161 ccggcggcaa gctcggtgct gtttgtgccg tttctgtatg gctcaaatgc aggcttagga
    17221 atgcaagccg gtttctatgg tatgcaagcc caccataccc aagcccatct cttgcaggca
    17281 atttacgaag gagtgttgtt tagcttgatg agccatttaa accgtatgtt tatccgcttt
    17341 ccaaaggctg acgtgctgcg agttaccggc ggaccggtga aatctaaagt ttggatgcaa
    17401 atgttggccg atttaaccgg aatgcggctt gaaataccac aaatggaaga aaccggctgc
    17461 ttgggtgcgg cattaatggc aatgcaaggg gttgggctgg atataagcca agttcaagcc
    17521 ctaaataatg aaatgcaggt gtttgagcca aatccggaaa attatgcggc ttatcagacg
    17581 aaatatcagc gttaccaaaa attaactgaa gcattaaata caatgattta acctgaattt
    17641 atgcttt
//
LOCUS       DANLXO010000053        17330 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.053, whole genome shotgun sequence.
ACCESSION   DANLXO010000053 DANLXO010000000
VERSION     DANLXO010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17330
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.053"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..602)
                     /locus_tag="PXD69_001460"
     CDS             complement(<1..602)
                     /locus_tag="PXD69_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL6283656.1"
                     /translation="METLIEFFSSYGYWAVFLVLLACGFGVPIPEDITLVSGGVISGL
                     GYTNVHWMLVVSMLGVLVGDSTMYWLGRIYGEKILKFPLIRNVATPERFATVQERFEK
                     QGWKLLFMARFLPGLRAVVYLVSGITRKVSFVKFLLVDFCAAIISVPIWVYLGDYGAS
                     NLDWLKEQVANGQHLIFAILGIVILFLGWKWYKNKKQYKK"
     gene            complement(604..1623)
                     /gene="purR"
                     /locus_tag="PXD69_001461"
     CDS             complement(604..1623)
                     /gene="purR"
                     /locus_tag="PXD69_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HDL6283657.1"
                     /translation="MATIKDVAKYAGVSTTTVSHVINKTRFVAEDTTKAVWEAIKALN
                     YSPSAVARSLKINTTKSIGMIITTSESPFFAEIVLAVEEFCYSKGYSLFLCNTQNKLE
                     KIQNHLDMLIKKRVDGILVMCSEYTANSFDIFENSNIPMVIMDWGRSDERSDIILDHG
                     VEGGYIATQHLIENGHQDIAVITGNRDKEIARTRFEGFKKALSEAGLSIREEWIQEGD
                     FEPEGGYECMNNLLKSSEKLPTAVFCFNDSMALGAISAITEKGLNVPQDISVIGYDNV
                     HSSRFYAPPLTTIHQSKSRLGSAALELLLERIEDNENAKEPKVLEFFPELVKRKSVRN
                     LNIKE"
     gene            complement(1759..2487)
                     /gene="cmoA"
                     /locus_tag="PXD69_001462"
     CDS             complement(1759..2487)
                     /gene="cmoA"
                     /locus_tag="PXD69_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDL6283658.1"
                     /translation="MQRDTLFSAPIEKLGDFTFDESVAEVFPDMIQRSVPGYSNIITA
                     IGMLAERFVTDNSNVYDLGCSRGAGILSIRRNVNAKNVQIIGVDNSQPMVERCKTHLS
                     AYHSEIPVTILLDDIRHIEIKNASMVVLNFTLQFLPREDRLALLQKIYQGLNSNGILV
                     LSEKFTFESEEMNELLIDLHHTFKRANGYSELEVSQKRNALENVMRTDSIETHKKRLQ
                     EAGFTQVELWFQCFNFGSMIAIKA"
     gene            complement(2497..3279)
                     /locus_tag="PXD69_001463"
     CDS             complement(2497..3279)
                     /locus_tag="PXD69_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL6283659.1"
                     /translation="MTEKSQLNFNYQPSNNHANAQTMIFLHGLFGDLNNLGAIAKPFA
                     ERYSILMVDLRNHGRSFHSDEMNYALIAQDLAQLLTELNIQNAIVVGHSMGGKSAMAL
                     AAFAPELVEKLVVIDIAPVTYTQNRHQQVMAALFAVKEAKPQNRQQAKAIMAEYIRDE
                     GVQQFMLKSFDAQSEQSFRFNLQALKDNYQNVMGWQQVFVDKPTLFIKGALSDYIQAE
                     HTQTILAQFPQAKSFIVANADHWVHAEKTGTVVRAINKFLEK"
     gene            3398..3964
                     /gene="seqA"
                     /locus_tag="PXD69_001464"
     CDS             3398..3964
                     /gene="seqA"
                     /locus_tag="PXD69_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HDL6283660.1"
                     /translation="MKRIEIDDELYQYIASRTQSIGETASDILRRLLRLPQSPQPFVL
                     VQEHMINELKELVKTPSRATKKNESNAEKTVEKLENILNSEHFMNENKNVVRFTMLLA
                     ALYRANPEAFAKATEKVRGNERIYFSQSEAEILATGSGVKAKQIPDSPFWVITNNNTA
                     RKGLILKGVMESMKVPSQLIERIQALFI"
     gene            3974..5392
                     /gene="menE"
                     /locus_tag="PXD69_001465"
     CDS             3974..5392
                     /gene="menE"
                     /locus_tag="PXD69_001465"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDL6283661.1"
                     /translation="MLINSTRFPTQFWAAHSAQNVAIIWEKGTSDYLNHLPSNITWYS
                     LNQLIAQAIFVLQQQGATPHSLIAYCGSHRLIGLLTYCASLALGAKILMLNPAQTASQ
                     RQAVLDDNGVELIINDADFAKFSAKTTACNAFPTIDFEKPATLTLTSGSSGKPKAVVH
                     SIAAHLYSAEGVCELMAFEQPNSWLLSLPLFHVSGQGIIWRWLFKGATLYVHEDKSDF
                     FLSAQKVSHLSLVPTQLQRYLNQLDSMVSQKCLLGGSMLPAELIAQAQQSGMTTFSGY
                     GMTEMASTICAVENDLNSVGFPLKHRELKLENGEIWVKGKSLGLGYWQKNGQIRPLVN
                     TQGWFATKDRGEWNHKKQLVIKGRLDNMFISGGENIQPEEIEQLIFRSQLVEQIIVLP
                     IEDKQFGHRPVAFLQFKQSDSKNELHKLKIWLSDKLERFKQPVAYYLLDIEKYQKQGL
                     IKLSRTQLQQDLKLKVLKEIYV"
     gene            5385..8762
                     /gene="mscK"
                     /locus_tag="PXD69_001466"
     CDS             5385..8762
                     /gene="mscK"
                     /locus_tag="PXD69_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HDL6283662.1"
                     /translation="MFRPILKTFVLSLGLMLNSYALAELPTQQVVQTQLDSAKKLDQA
                     DADNKALVQTLEDTLAFLAQIDKQKADNQALNKSIQDSQKALKTSQHNLEKLKEVTIA
                     SVDNLTQKATTDLQKELTSTQSQLETVQHDLSIINNNLVAQNTAPDKAQTALTEMVKR
                     KQEISSQLSATNIKNELQTKLEVELELIELKNTYNQILLGGSEDLSALYSAQLDEKKQ
                     EQQNLQAEIANLQTAINNKIVEESQNKLDQAQAVQNQQNNATTNPVILRELDINTKVT
                     QELLKQTKDMTQLSQDNLRIKSVLDNLQQTQRNIEEQISSLQGTLVLSRIINKQKQSL
                     PQDEMISGLSKQIADLRVRVFDITEFKDSFADINAYISRIEQDEKTTFTSKEKEQLSK
                     ILQERSDTLTEMIKSLNNQLNLLINIELNQQQVQTISDALQQKLQQQSFWVKSNNPID
                     LEWFSKFVDITHYQFIDIGKKLNFSNWRDNLLPASILVGILLLLAIFINRQKDKIKQK
                     LHQINNRLKIVATDSQWNTPLAIFWTLVLCLPSTLMFLAGFVAITYISFENPQEVWTW
                     GLKMAIYWLYFAFLVAMLRPHGIGHIHFNMPQKSNEIFRNILKRSVWIIALLLNTSIF
                     TNLEMGISYDMLGQTMTIFVLILMIWMIVPAFRQAISTYENVTTEEKKESKSILLTIV
                     KLVLLLAPIILIILIALGYYYTALVIIEHLVDSYFAIITWIIIRNILYRAFSISSRRL
                     AYRRLQEKREAAEAKTRAKAEQNDENPDGVELPFELKEDSIAVSEVKNQMLKLTDFVL
                     WIGLFVLLYWVWSDLITVALYLDGVTLWQQSVTTEAGIVMESITLLNLLTAILIIVVM
                     VVLIRNLSGLLEALIFSHFKLSQGTPYTITTLLTYLIIALGAIFAFGTLGMSWSKLQW
                     LLTALSVGLGFGMQEIFANFVSGIIILFERPMRIGDTITIGTYSGTVSKIRIRATTLV
                     DFDGKEVIVPNKAFVTERLVNWALSSTATRIIVQVGVAYGSDLELVKRLLLQVAEENP
                     KVLKDPQPRAYFLTFGASTLDHELRAYVNDLSDRNPTIDALNTRIHQLFNEHNIDIAF
                     NQLDVYIKNNDTQDEIKVDSKRFEFERPNNITAKEKE"
     gene            8765..9847
                     /gene="aroC"
                     /locus_tag="PXD69_001467"
     CDS             8765..9847
                     /gene="aroC"
                     /locus_tag="PXD69_001467"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDL6283663.1"
                     /translation="MAGNSIGQLFKVTTFGESHGIALGCIVDGVPPNMALSEADLQPD
                     LDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGLIIKNGDQRSQDYGDIAEKF
                     RPGHADYTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLREQFGIEVRGYLSQI
                     GNIKIDPKTVENIEQIDWHAVNSNPFFCPDPVAIEGFDALIRELKKEGDSVGAKLTVI
                     AERVPVGLGEPVFDRLDADLAHALMSINAVKAVEIGDGFAVVEQRGSQHRDEMTPQGF
                     LSNHAGGILGGISSGQPIIAHIALKPTSSITIPGRSVNKNNEAVEVITKGRHDPCVGI
                     RAVPIAEAMMAIVLLDHLLRFKAQCR"
     gene            9866..10693
                     /gene="mepA"
                     /locus_tag="PXD69_001468"
     CDS             9866..10693
                     /gene="mepA"
                     /locus_tag="PXD69_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HDL6283664.1"
                     /translation="MKLLKTLLVSSLAFTATALNATQWEKIKTPVQGKAQSIGGYSNG
                     CIIGAQPLALKGEGYQVIRSARNRYYGHPQLLDYLTHLGKKTKAAGVPTILIGDMGMP
                     AGGRFASGHASHQTGLDADIWFKFGPMDDETARNPAGLATIMVNRSTERVDDSLWNQH
                     HTNLVKLAATDPRVDRIFVNPAIKVKLCQTAGNDRAWLRKIRPWYGHDSHFHVRLTCP
                     ADAASCENQALVPAGDGCGEELYSWFEPKEASGTPKAKVLPTAPVQCQMILSEQGLN"
     gene            10766..12685
                     /locus_tag="PXD69_001469"
     CDS             10766..12685
                     /locus_tag="PXD69_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL6283665.1"
                     /translation="MRLFVAEKPSLARAIADVLPKPHTKGDGFIQCGEHDTVTWCIGH
                     LLEQAEPDVYDERFKMWRMEHLPIVPEQWKLIPKKETLKQFKVVEKLIKKADVLVNAG
                     DPDREGQLLVDEVFGYLNLSAERKSQIQRCLVSDLNPNAVSRAIEKLQKNSDFIPLAT
                     SALARARADWLYGINMTRAYTLQGRWAGYKGVLSVGRVQTPVLGLIVRRDLEIEHFVP
                     KDYFEVLAQIVVPETQERFKAQWQPSKACEDYQDEDGRVLSRPLAENVVKRITDQPAT
                     VTEYQNKIEKETAPLPYSLSVLQMEAAGRYGLSAQAVLDICQKLYETHKLITYPRSDN
                     RYLPTEHFNDRFKVMAAIAHHLPEYQQKPEVIDATIRNRCWNDKEVEAHHAIIPTARQ
                     GTVHLTENEKRVYQLIARQYLMQFCPDAEYRKSKIGLEIAGGSFVAQARNLVIAGWRA
                     LLGKEDSLDDAEPLLPIVKKGQILHCEKGEIVSKKTQPPRHFTDRSLLSAMTGIARFV
                     QDKELKKILRETDGLGTEATRAGIIELLFKRGFLIRKGKNIHSTEAGRILIQALPDSA
                     TQPDMTAHWEMQLNQISKKETSYQQFMFDLNQQLPHLLQSPNRQVLQNLAKITPLASG
                     NKPRYFKKRTQTAEN"
     gene            12791..13117
                     /gene="secG"
                     /locus_tag="PXD69_001470"
     CDS             12791..13117
                     /gene="secG"
                     /locus_tag="PXD69_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDL6283666.1"
                     /translation="MLINVLTIVYLVVAVLLIAFVLMQQGKGADAGASFGAGASATVF
                     GSAGSANFLSRTTALLATIFFAISLVIGNLSSHNVAPKSQFEDLSQVEQKQVEPVKIE
                     NSDIPQ"
     gene            13142..13227
                     /locus_tag="PXD69_001471"
     tRNA            13142..13227
                     /locus_tag="PXD69_001471"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13176..13178,aa:Leu,seq:gag)
     gene            13430..14671
                     /locus_tag="PXD69_001472"
     CDS             13430..14671
                     /locus_tag="PXD69_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6283667.1"
                     /translation="MARTTKALNKTQIENAKSKDKEYILSDGDGLNLRVKPLPKGSKI
                     WIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAE
                     NRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKHVEEIKVKALV
                     DIYSKVADKSNTLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIKPSTPNPTIEL
                     EELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKLWNIPKEKM
                     KGKADKKRPHSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSKPMSNATVNSTLKRN
                     GYKDRLTAHGIRAFVKTFLSSRKVDRHVSESILSHLLEGGDDLENTYNRYDFLEERVP
                     VMQLLGDYCEQCGMNLELVRG"
     gene            complement(14830..16698)
                     /locus_tag="PXD69_001473"
     CDS             complement(14830..16698)
                     /locus_tag="PXD69_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDL6283668.1"
                     /translation="MFKKLLELRQQKAAIEAEMRSILTKADEEKRSTTEAEGAKFDEL
                     RSQAENLVKEIARYEAITDEQRNQPGQQVETANVKVSDDELRHWIKTGELRSLATNTN
                     GGADGGYSVIPELDKQVMKRLTDDSVMRQIANVVKLTQGKEYKKLVSAGGAAVNHIGE
                     GEARTETATPKMNEVTIAVHNIYAYPKTTQEILDFGGVDILGWLTEEISESFVETEET
                     DLTNGTGTKQAKGFLAYPRTTANDKTRPFGTLQKMEVQPATVIGWNSKGQPETLTPYP
                     PYSVNVQRTVNRQNWLTAYIPHSYDENVAETPHFDQWLNFVSDGKQDKAKNILAALYA
                     ILTNRYNWQVFFQVTGKGGSGKSVFAGIATLLAGEKNTASARLENFDDERKIAGLEDK
                     KLIICSEQTKYAGDGGGLKAITGGDMVRVDPKNKHPFNARIAAMIMIVNNDPCKWTER
                     NGGIDRRIVNFRFNKRPPENERDPYFMDKITLEIGGIIRKVLDTFPDPLEAKRALEEQ
                     KESLEALEIKKQSDPLTDFFEYLYTTENTDGLYIGTGNTLGHDKIRTHLYPAYLAFVK
                     AKNVLELGLNTFVVGIEQAVKQHGNKHDFTKRKTNKGQRTNVHFKNFDDFQSDILN"
     gene            complement(16709..17104)
                     /locus_tag="PXD69_001474"
     CDS             complement(16709..17104)
                     /locus_tag="PXD69_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283669.1"
                     /translation="MISNEAIRQEVIDLLQGNIQGIQHFHNGRAVFTDVENELPAIAV
                     FIDEAEYSQLTLCDGECNAYLKIGIYLPMFSTENDLDLVAQKISDVMNQATFHSMDEC
                     VLAKYSYDYDANESAWKTATLHYNINYLN"
BASE COUNT         5374 a         3601 c         3369 g         4986 t
ORIGIN      
        1 cactttttat actgcttttt atttttatac catttccagc ctaaaaatag aataacaatg
       61 cctaaaatgg caaaaatgag gtgctgccca ttagctactt gttcttttag ccaatccaaa
      121 ttagatgccc catagtcgcc taaataaacc caaattggca cagagataat agcggcacag
      181 aaatcaacta ataaaaattt tacgaagctg acttttctgg taatacctga aactaagtaa
      241 accaccgcgc gcaagccagg taaaaaacga gccataaaaa gtagtttcca tccttgtttt
      301 tcaaaacgtt cttgcacggt tgcaaaacgt tcaggtgtcg caacattcct gattaatgga
      361 aatttgagaa ttttttcgcc atagattcta cctagccagt acattgtgct atcgccaact
      421 aatactccta acatactaac aaccagcatc caatgcacat tggtgtagcc taatcctgaa
      481 ataacaccac cggatactaa cgtaatatct tcaggaatcg gcacaccgaa accacaggca
      541 agtagcacaa gaaaaacagc ccaataacca tagctactaa aaaattcaat caatgtttcc
      601 atattactcc ttaatgttta aattccgaac cgatttacgt ttgaccaatt caggaaagaa
      661 ctctaatact ttaggctctt ttgcgttttc gttatcttca atacgttcta ataataattc
      721 taatgctgcc gagcctaagc gagattttga ctgatggatt gtcgtaagag gcggtgcata
      781 aaagcgtgag ctatgcacgt tatcataccc gatcactgaa atatcttgcg gcacattcag
      841 ccctttttcg gtaatagctg aaattgcccc tagtgccatt gagtcattaa aacaaaaaac
      901 cgcggttggt aatttttcac tgctcttaag caaattattc atacactcat accccccctc
      961 aggttcaaaa tcgccttctt gaatccattc ttcacgaata gacaaacccg cctcagatag
     1021 cgctttttta aaaccttcaa aacgggttct tgcaatttct ttatctctat tgccggtaat
     1081 tacagcaata tcttgatgcc cgttttcaat taaatgctga gtcgcaatat agccaccttc
     1141 aacaccgtga tctaaaataa tatcactgcg ttcatcactt cgtccccaat ccataatcac
     1201 cattgggata ttgctgtttt caaagatatc aaatgaatta gctgtatatt cggagcacat
     1261 caccaaaatg ccatcaaccc gttttttgat gagcatatct aaatgatttt gaattttctc
     1321 aagtttgttt tgagtattgc acaaaaatag tgaataccct ttgctatagc aaaattcctc
     1381 taccgctaac acaatttcag cgaaaaacgg tgattcgctg gttgtaatga tcataccgat
     1441 agatttagtc gtattaattt tcaaactccg cgctacagca ctaggagaat agttcagcgc
     1501 tttaatagcc tcccaaactg cttttgtagt gtcctctgct acaaagcggg ttttgtttat
     1561 aacgtgagaa accgttgtag tcgatacacc agcatatttt gcgacatctt ttatcgttgc
     1621 catacctttt tcctcctaaa taagtagtgg tgcattataa ctgattctaa ctgactttta
     1681 ttataaagaa atagatagaa tgcaagcggt tgctttttat caagaatttg caaaaaattt
     1741 tacaaatatc accgcttgtt aggctttaat tgcaatcatt gagccaaaat taaagcattg
     1801 aaaccaaagt tcaacttgtg taaaaccagc ttcttgcaga cgttttttat gggtttcaat
     1861 actatctgtt cgcatcacat tttccaaagc attacgcttt tggctgactt ccaattcact
     1921 gtagccattt gctcgtttga atgtgtgatg aaggtcgatc aatagctcgt tcatttcctc
     1981 actctcaaag gtaaattttt ccgataacac taaaatgcca ttggaattta atccttgata
     2041 aatcttctgt aataatgcta ggcgatcttc tcttggtaaa aattgcaagg tgaaattaag
     2101 taccaccatt gaagcatttt taatttcaat gtggcgaata tcatcaagta aaatcgtcac
     2161 cgggatctca gagtgataag cacttaaatg ggttttacaa cgctcaacca tcggctgaga
     2221 attatctacc ccgataatct gcacattctt cgcattcaca ttacggcgaa tagataaaat
     2281 ccctgcgcct cgtgaacaac ctaaatcata aacatttgaa ttatctgtga caaaacgctc
     2341 cgccaacatt ccaatagcag taataatatt ggaatagccc ggcacggagc gttggatcat
     2401 atccggaaac acttcagcaa ccgattcatc aaaagtaaaa tcgcccaatt tctcaatcgg
     2461 agcggaaaat aatgtatctc tttgcatttt tctcccttat ttttctaaaa atttattgat
     2521 tgctctcaca acagttcctg ttttttctgc gtgaacccaa tgatcagcgt ttgccacaat
     2581 gaaagatttg gcctgcggaa attgtgccaa aatcgtttgt gtatgctctg cttgaatata
     2641 atccgataat gcacctttaa taaacaaggt cggtttatcc acaaatacct gctgccaccc
     2701 catcacattc tgataattat cttttagcgc ctgtaaatta aaacggaaag attgctcgct
     2761 ttgggcatca aaagatttca acataaactg ttgcacgcct tcatctcgaa tatattcagc
     2821 cattatcgct ttagcttgct gacgattctg gggtttagct tctttcaccg caaataaggc
     2881 tgccataacc tgctgatgcc gattttgggt ataagtgacc ggggcaatat caatcactac
     2941 caatttctcc accagttcag gagcaaatgc agccaatgcc atcgcacttt ttccgcccat
     3001 tgaatgccca accacaatag cattttggat atttaattct gtgagtaatt gtgctaaatc
     3061 ttgtgcaatc aaagcataat tcatttcgtc tgaatgaaaa gatcgcccgt gatttctgag
     3121 atcaaccatt aaaatggagt aacgttctgc gaatggtttt gctattgcgc ctaggttatt
     3181 taaatctcca aacaatccat gtaagaagat catcgtctga gcattagcat gattattcga
     3241 aggttggtaa ttaaagttta actgcgattt ttctgtcata taaatgtcat tgttcatata
     3301 aattttcagc gatgttcctc tataaaaaac aatagaaatg cgtataatag caagcactat
     3361 taacgcattt aatacccgca gatatttgag gatcccgatg aaacgaatcg aaattgatga
     3421 tgaattatat cagtatattg caagccgtac acaatctatt ggtgaaactg cgtcagatat
     3481 attacgccgt ctattacgcc tgccacaatc gcctcagcct tttgttttag tacaagaaca
     3541 catgatcaac gagcttaaag agcttgtcaa aacgccttct cgtgctacga aaaaaaatga
     3601 atccaatgca gaaaaaaccg ttgaaaaatt ggaaaacatt ttaaattccg agcattttat
     3661 gaacgaaaat aaaaatgtag tgcgttttac tatgctatta gccgcattat atcgagcaaa
     3721 tccggaggct tttgctaaag caaccgaaaa agtgcgtggt aatgaacgta tctacttttc
     3781 gcaaagtgaa gccgaaattt tagctactgg gagtggagta aaagccaagc agatcccaga
     3841 ttcaccgttt tgggtaatta ccaataataa taccgcacgc aagggactta ttctcaaagg
     3901 cgtaatggaa tccatgaaag taccaagcca gttaatcgaa cgcattcaag cgctttttat
     3961 ctaattaatt gaaatgctca tcaattctac tcgctttcct acccaatttt gggctgctca
     4021 ttcagcccaa aatgtggcga ttatttggga aaaaggaaca tcagactatc ttaaccacct
     4081 tccatcaaac atcacttggt atagtttgaa tcagttgatt gcgcaagcta ttttcgtgtt
     4141 gcaacaacaa ggtgctactc cgcacagttt gattgcctat tgtggttctc atcggctcat
     4201 tggcttgctc acttattgtg ctagccttgc tttgggggct aagattctaa tgcttaaccc
     4261 tgctcaaaca gcaagtcaac gacaagcagt cttagatgac aatggtgttg agctcattat
     4321 taatgatgcc gactttgcaa aattttcagc aaaaacgacc gcttgtaatg ccttccctac
     4381 gattgatttt gaaaaaccag ctaccctaac cctaacctca ggctcaagcg gtaaacctaa
     4441 agcagtggtg cattctatag cggcccatct ctatagtgcc gaaggagtat gtgaattaat
     4501 ggcatttgag cagccaaact cttggctact gagcttgcct ctgtttcacg tttccggaca
     4561 aggcattatt tggcgttggt tatttaaagg tgcaacactg tatgttcacg aagacaaaag
     4621 tgattttttt ctttcagcac aaaaagtgag ccatctctct ttagtcccca cccaattaca
     4681 acgctattta aaccaattag attctatggt cagccaaaaa tgtttactgg gtggatctat
     4741 gcttccagcc gaattgattg ctcaagcaca acaatctggg atgactacct tttcaggcta
     4801 cggaatgact gagatggcat caaccatttg tgcagtagaa aatgatttaa acagtgttgg
     4861 ttttccgtta aaacatcggg aactaaaatt agaaaatggt gaaatttggg taaaaggcaa
     4921 atcactcggc ttaggctatt ggcaaaaaaa tgggcaaatt cgaccgcttg taaacacaca
     4981 aggctggttt gccactaaag atcgtggcga atggaatcac aaaaaacagc ttgtaataaa
     5041 aggacgattg gataatatgt ttatttcagg aggggaaaat atccaacctg aggaaattga
     5101 acaactgatt tttcgttctc agcttgtcga acagattatc gtgttgccga ttgaagataa
     5161 gcaatttgga catcgaccag tggcgttctt acaattcaag caatctgatt caaaaaatga
     5221 actccataaa ttaaaaattt ggctgtctga taaattagaa agattcaaac agcctgttgc
     5281 ctattattta ctggatatag aaaaatacca aaaacaaggc ttaattaaac tatcaagaac
     5341 acaattacaa caagatttaa aactcaaagt attaaaggaa atctatgttt agaccgattt
     5401 taaaaacatt tgtgcttagt ttaggcttaa tgctaaatag ttatgcatta gctgaattgc
     5461 caacccaaca ggtagtgcaa acgcagttag atagcgccaa aaaattagat caagccgatg
     5521 cggataataa ggcattggtt caaacacttg aagatacgct tgctttctta gcccaaattg
     5581 ataaacaaaa agcagataat caggcattga ataaatctat tcaagattcc caaaaagcat
     5641 taaaaacaag ccaacataat cttgaaaaat taaaagaggt gactattgca agtgtcgata
     5701 atttaacaca aaaagcgaca acagatttac aaaaagagtt aacctctaca caatctcagc
     5761 tggaaacagt acaacacgat ttaagtatta ttaataataa tttagttgca caaaataccg
     5821 caccggataa ggctcaaacg gccttaaccg agatggttaa acgtaaacag gaaattagta
     5881 gccaactttc agcgactaac attaaaaatg aactacagac aaagttagaa gtagaattag
     5941 aattaataga attaaaaaac acttacaatc aaatattact tggtggcagc gaggatttat
     6001 ctgcgcttta ctctgctcaa ttagatgaaa aaaagcaaga gcagcaaaat ctacaagcag
     6061 aaattgcaaa cctgcagact gctatcaaca ataaaattgt agaagagtct cagaacaagc
     6121 tagatcaagc acaagcggtt caaaatcagc aaaataatgc aacgacgaac ccagttatct
     6181 tgcgtgaatt ggatataaat accaaagtca cacaagagtt gctaaaacag accaaagata
     6241 tgacgcagtt atcacaagat aatttgcgaa tcaaaagtgt gctagataac ttacagcaaa
     6301 cccaacgtaa tattgaagaa caaatcagtt ctctgcaagg tacgttggtg ctttctcgta
     6361 ttattaataa gcaaaaacaa tcattaccac aagatgaaat gatttccgga ctatcaaaac
     6421 aaattgcaga tttacgtgta cgtgtttttg atatcactga atttaaagac tcttttgcgg
     6481 acataaatgc ttatatcagc cgcatagagc aagatgaaaa aacaaccttt acgagtaaag
     6541 agaaagaaca actgagtaaa attttacagg aacgttctga cactttaact gagatgatta
     6601 aatcattaaa taatcagctc aatttattaa tcaatattga actaaaccag caacaagtgc
     6661 agaccattag tgatgcgtta cagcaaaaac tgcaacagca aagcttctgg gttaaaagta
     6721 acaaccccat tgatcttgaa tggtttagta aatttgtcga tattacccac tatcaattta
     6781 ttgatattgg aaaaaaactc aatttttcaa attggcggga taatttatta cctgcaagta
     6841 ttttagtcgg aattttattg ctattagcca tctttattaa tcgccaaaaa gataaaatta
     6901 aacaaaaatt acaccaaatt aataatcgac taaaaattgt cgccacagat agccaatgga
     6961 acacccctct tgctattttt tggacattag tgctttgcct gccaagtaca ctaatgttct
     7021 tagccggatt tgttgctatc acttatattt catttgaaaa tcctcaggaa gtctggactt
     7081 ggggattaaa aatggcaatt tattggctgt attttgcctt tttagtggcg atgctacgcc
     7141 cgcacggcat aggacatatt cactttaata tgccacaaaa aagtaatgaa atcttccgta
     7201 atattttaaa acgttcggta tggatcattg ctttattact gaacacctct atttttacaa
     7261 acttagagat gggaatatct tacgacatgc ttggacaaac aatgactatt tttgtcctta
     7321 tattaatgat ttggatgatt gtaccggcat ttaggcaagc tatttctacc tatgagaatg
     7381 tcacaacaga agagaaaaaa gaatctaaaa gtattttact cactattgtc aaattagtgc
     7441 tactgcttgc ccctatcatt cttatcattc tgattgcatt gggctattac tatactgcac
     7501 tggtgatcat tgagcattta gtagattctt attttgcgat cattacttgg attattattc
     7561 gtaatattct ctatcgagca ttctctattt catcacgccg tctggcttac agacgtttac
     7621 aagaaaaaag agaagcagct gaagccaaaa cacgagctaa agcagaacaa aatgatgaaa
     7681 acccggacgg tgtcgagctt ccttttgagc taaaagaaga ctctattgcc gtaagcgaag
     7741 tcaagaacca aatgttgaaa ttaactgatt ttgtgctttg gattggctta tttgtgctgc
     7801 tttactgggt ttggtcggac ttaattactg ttgcactcta cctagacggc gttaccttat
     7861 ggcaacaaag tgttacaaca gaagccggga ttgtaatgga atccattacc ctgctgaatt
     7921 tactcactgc tattctgatt attgtggtaa tggtggtact cattcggaac ttatccggtt
     7981 tacttgaagc cctgattttc tcgcacttca agttatcgca aggtacacca tacacaatta
     8041 ccacactctt aacctatttg attattgcgt taggggcaat ctttgcgttc ggtacattag
     8101 ggatgtcttg gagcaagctc caatggctac taactgcact ttctgtcggt ctgggttttg
     8161 gtatgcaaga gatctttgca aacttcgttt cagggattat catcttgttt gaacgtccaa
     8221 tgcggattgg cgacaccatt accatcggca cttacagcgg tacggtttcc aaaattcgta
     8281 ttcgtgccac aaccttagtc gattttgacg gcaaagaagt gattgtacca aacaaagcat
     8341 tcgtaaccga acgcttggtg aactgggcat taagcagcac cgcaacccgc attattgttc
     8401 aagtcggcgt ggcttacggg tctgatttag aattagtcaa acggctgtta ttacaagtgg
     8461 cggaagaaaa tccgaaagtc ttgaaagatc cacaaccaag ggcttatttc cttacctttg
     8521 gtgcaagcac tttagatcac gaattaagag cctatgtgaa cgatttatct gatcgtaacc
     8581 caactattga tgcactaaat acacgcatcc accagctctt taatgaacat aatattgata
     8641 ttgcatttaa ccaattagat gtttatatca aaaacaacga tacacaagat gaaattaaag
     8701 tagattcaaa acgctttgag tttgaacgac caaataacat aacagcaaaa gaaaaggaat
     8761 aacaatggca ggcaacagca tcggacaatt atttaaagtg accactttcg gcgaatctca
     8821 cggtattgca ttaggctgta tcgtagatgg cgtaccgccg aatatggctt taagcgaagc
     8881 agatttacag ccggatttag accgccgtaa acccggtact tcacgctaca ccacgcctcg
     8941 ccgtgaagat gatgaagtgc aaattttatc gggagtcttt gaaggcaaaa cgacgggaac
     9001 aagcattggt ttaatcatta aaaacggtga ccaacgctca caagactatg gcgacattgc
     9061 cgaaaaattc cgcccggggc acgcagatta tacctatcag caaaaatacg gcattcgaga
     9121 ttaccgtggc ggtgggcgtt cttctgctcg ggaaaccgca atgcgggttg ccgccggggc
     9181 gattgccaaa aaatatttgc gtgagcaatt tggcattgaa gtgcgaggct acctctcaca
     9241 aatcggcaat atcaaaattg acccgaaaac cgttgaaaat attgaacaaa ttgattggca
     9301 cgcagtcaat agtaatcctt tcttctgccc cgatcccgtt gcgattgaag gctttgatgc
     9361 cttaattcgt gagctgaaaa aagagggcga ttcggtgggg gcaaaattaa ccgtgattgc
     9421 agagcgtgta cctgtagggt taggcgaacc tgtgtttgac cgcctagatg ccgaccttgc
     9481 ccacgcctta atgtcgatca acgccgtgaa agcggtggaa attggcgatg gttttgcagt
     9541 tgtggaacaa cgtggtagcc agcaccgaga tgagatgacg ccgcaaggct ttctctctaa
     9601 tcacgccggc ggaattttag gtggtattag ctccggtcag ccgattatcg ctcatattgc
     9661 gttaaagccg acctcaagca ttactattcc cggcagaagc gtgaacaaaa acaacgaagc
     9721 cgttgaagtg atcactaaag gcagacacga cccctgtgta ggtattcgtg ctgtgccgat
     9781 tgcagaagcg atgatggcga ttgtactact cgaccatctg ttaagattta aggctcaatg
     9841 ccgttaaaca cataaaattg gaaaaatgaa attattaaaa acacttttag tctcaagcct
     9901 tgcttttaca gctaccgcac tgaatgcaac gcaatgggag aaaatcaaaa ctccggttca
     9961 aggaaaagca caatctatcg gcggttatag taacggctgt attattgggg cacagcccct
    10021 tgcattaaaa ggcgaaggct accaagtgat ccgctcggct cgtaaccgct attacggaca
    10081 cccacaactg ctcgattatc tcactcactt aggcaaaaaa accaaagctg ccggtgtgcc
    10141 gaccatttta atcggcgata tgggaatgcc tgccggtggg cgttttgcct ccggtcacgc
    10201 ctcccatcaa accgggctgg atgctgatat ttggtttaag ttcggaccga tggacgatga
    10261 aaccgcccgc aatccagcag ggcttgccac cattatggta aaccgtagta ccgagcgggt
    10321 tgatgattca ctctggaatc aacaccatac taatttagta aaacttgctg caaccgatcc
    10381 tcgagtggat cgcatttttg tcaatcctgc cattaaagtg aaactctgcc aaaccgcagg
    10441 caatgatcgt gcttggttac gcaaaattcg cccgtggtac ggacacgact cccatttcca
    10501 cgtccgttta acctgcccgg ctgatgccgc aagttgtgaa aatcaagccc ttgtgcctgc
    10561 cggtgacggc tgtggtgaag agctttactc gtggtttgag ccgaaagaag cctccggcac
    10621 accaaaagcc aaagtgctac ccacagcgcc tgttcaatgt cagatgattt tatctgaaca
    10681 aggcttgaat taattgcaaa ataacaacct tttttgaccg cttgtcagcc cacaagcggt
    10741 tcattttctt aaataattta cgattatgcg tttatttgtt gccgaaaaac ccagccttgc
    10801 ccgagcgatt gccgatgtgt taccaaaacc ccataccaaa ggagatggct ttatccaatg
    10861 cggcgaacac gacactgtta cttggtgtat cggtcattta ttggaacagg ctgaacccga
    10921 tgtctatgat gagcgtttca aaatgtggcg aatggaacat ttgccgattg tgcctgaaca
    10981 atggaaattg attcccaaaa aagagacgct caagcagttt aaagtggtgg aaaagctgat
    11041 taaaaaagcc gatgttttag tcaatgccgg agacccggat cgagaagggc agctgttggt
    11101 ggacgaagtt tttggctatt tgaatttatc tgctgaacgc aaaagccaaa ttcagcgttg
    11161 tttggtaagc gatctcaacc cgaatgcggt gagccgagcc attgaaaaat tgcaaaaaaa
    11221 cagcgatttt ataccgcttg caacctctgc tctcgcccga gccagagcgg attggctgta
    11281 tggtatcaat atgacccgag cctataccct acaggggcgt tgggcaggct ataaaggcgt
    11341 gttatcagtc ggacgtgtgc aaacgccggt attagggctg attgttcgcc gagatctgga
    11401 gatcgagcat ttcgtgccaa aggattattt tgaggtgttg gcacagattg tcgtgccgga
    11461 aacccaagag cgatttaagg cgcagtggca accgagcaaa gcctgtgaag attatcaaga
    11521 tgaagatggg cgggtgctgt ctcgtccatt ggcagaaaat gtggtaaaac ggattaccga
    11581 ccagccggca accgtcaccg aatatcaaaa taaaattgaa aaagaaactg caccgctgcc
    11641 ttattctctt tcggtattac aaatggaagc cgccggcaga tatgggctat ccgcccaagc
    11701 ggtgttggat atttgccaaa agctgtatga aacccataaa ctaattacct accctcgttc
    11761 tgataatcgg tatttgccga ccgaacattt caacgacaga tttaaagtga tggcggcgat
    11821 tgctcatcat ttacctgaat atcaacaaaa accggaagtg attgatgcca ctattcgcaa
    11881 tcgttgctgg aatgataaag aggtggaagc ccaccacgcc attattccca ctgcacggca
    11941 agggacggta catttaaccg aaaatgaaaa aagagtttat caactcattg cccgccaata
    12001 tctaatgcaa ttctgccctg atgcggaata tcgcaaaagt aaaatcgggc ttgaaattgc
    12061 aggtggtagt tttgtcgctc aagcacgcaa ccttgtaatt gccggctggc gagcgttact
    12121 gggtaaagaa gatagccttg acgatgcaga gccactacta ccgattgtca aaaaagggca
    12181 aatcctccat tgtgaaaaag gggaaattgt cagcaaaaaa acacaaccgc cccgccactt
    12241 tactgatcgc agtttgcttt cagcaatgac cgggatcgcc cgttttgtac aagataaaga
    12301 attgaaaaaa atcttgcgtg aaaccgatgg tttaggcacg gaggcaaccc gagccggtat
    12361 tatcgaattg ctgtttaaac gtggtttttt aatccgtaaa gggaaaaata tccacagtac
    12421 cgaagccggc agaatattga ttcaagcact tcccgactct gctacccagc cggatatgac
    12481 cgctcattgg gaaatgcagc tgaatcaaat cagcaaaaaa gagaccagct atcagcaatt
    12541 tatgtttgat ctaaaccaac agctcccaca tttattacaa agcccaaacc gccaagtgtt
    12601 gcaaaattta gcgaaaatca caccgcttgc aagcggcaat aaacctcgtt attttaaaaa
    12661 gcgaacacaa actgctgaaa attaaatcaa gcaggtaaaa attactgttt agcacttgtc
    12721 aaacgggcgt aaattctata ttatgcacgc cattgcaaat ttcgcataaa gaatacaaga
    12781 gaataaatta atgttaatta atgtactcac tattgtttat cttgtagttg ccgtattact
    12841 gatcgcattt gtattaatgc aacaaggtaa aggcgctgat gcaggtgctt ctttcggggc
    12901 gggtgcttca gcaacagttt tcggctcagc aggatcagca aattttttat caagaacaac
    12961 tgctctactt gcaacgattt tcttcgcaat tagtttagtt atcggtaatt taagctcaca
    13021 caatgtagca ccgaaaagcc aatttgaaga cttaagccaa gttgaacaaa agcaagtaga
    13081 acctgtaaaa atagaaaata gcgatatccc tcaataatcg cttaacatta aaaagaataa
    13141 agctctggtg gtggaattgg tagacacgcc atcttgaggg ggtggtggac acagtccgtg
    13201 cgagttcaag tctcgcccag agcaccattc aactaaattt ggctcaacgg agctaaacta
    13261 aaaaagcctt agaaagcctg taaaatcaac atttacaggc ttttttacta tcttaactca
    13321 acggctctaa acgtttccta tcacaaattt tagttacacg tttagttaca cgttttaaat
    13381 cgtgttacta tactttcaat aatcgtgtaa cacttcgtag gtttaattta tggctagaac
    13441 aactaaagca ttaaataaaa ctcaaataga aaatgccaaa tcaaaggata aagaatatat
    13501 tttatccgat ggcgatggat taaatcttag agttaaacct ctccctaaag gctctaaaat
    13561 ttggattttt aactacacta acccacaaac taaaaacaga acaaatttaa ctattgggcg
    13621 ttacccctta attacacttg cggaagctcg cactatatgt gatggctacc gctcgttaat
    13681 agagaaaggc atagatccac aggaagaaaa aaagcggctg caacaagaag cagaaaatcg
    13741 agtaaatgat actttccgga atgtggccga aagctatttc aatggtattt ataaagagaa
    13801 agcaaaaaat ccgattactc gtgaaaagaa ttggataagg ttagaaaatc atattttccc
    13861 ctatatcggg gataaacacg ttgaagaaat caaagtaaaa gcccttgttg atatttattc
    13921 taaagtggca gataaaagca acacattaaa aaaactgcat cagcttgtat ctgctgtaat
    13981 ggatcacgcc attacgcaag gcattataga aagccataac tgccgattag cagttaaaaa
    14041 cttttatatc aagccatcta cgccaaatcc cactattgag cttgaagaat taccgcagtt
    14101 atttactgat ttacataatg cgaagttatc aaagcaaact tacgcccttg tttgttggtc
    14161 gttcttgact gctctacgcc caaatgaagc cgttaatgct gaatggaaag aaatagactt
    14221 tgagaaaaag ctatggaata tccctaaaga gaagatgaaa ggaaaagcag ataaaaaacg
    14281 ccctcactct gtgccgttat cctcccaagc gttaaagata ttagagatga tgaaaatgca
    14341 ctctaattct agcccttttg tttttccagg tcgttcatca aatagtaaac caatgagcaa
    14401 cgcaacggta aattcaacat taaaaaggaa tggatataaa gatagactaa ccgcacacgg
    14461 tattcgggca tttgtgaaaa catttctatc ttctcgcaaa gtagatcgcc acgtttccga
    14521 aagtatatta tcccatttat tagaaggtgg agatgattta gaaaacacat acaaccgata
    14581 tgatttttta gaagagcgtg tgccagtaat gcagctttta ggtgattatt gcgaacagtg
    14641 cggaatgaat ttagagttag ttcggggtta gggaggtaaa atatatgatt ttagtcgtca
    14701 cgtcatcact tttcccactt tcccctttaa aatcaaatag ttaagtggtg atgactggtt
    14761 ttaaagtcat cattaagtca tcacaaaaag gtgatgacct agaaaaaaag aggggtttcc
    14821 ccctctttgc taattcaaaa tatcactttg aaagtcatca aaatttttga aatgaacgtt
    14881 tgttcgttgc cctttattcg tctttcgttt tgtgaaatcg tgcttattgc cgtgttgctt
    14941 tactgcttgc tcaataccta ctacaaaagt atttaagcct agttctagca cattcttagc
    15001 cttaacaaag gctaaatatg ccggataaag gtgcgttctt attttgtcgt gtccaagcgt
    15061 gttgccagtt ccgatataaa gcccgtctgt attttctgtt gtatatagat actcgaaaaa
    15121 atccgttaat gggtcagact gctttttaat ctccaacgcc tctaggctct ctttttgctc
    15181 ctctaaggct cttttagctt cgagtgggtc agggaaggta tcaagcactt tacggataat
    15241 gccccctatc tctaatgtaa ttttatccat aaaatacgga tcacgttcat tttcaggcgg
    15301 tcttttatta aaacggaaat tgacaatccg cctatctata ccgccattcc gttctgtcca
    15361 tttacaaggg tcgttattga cgatcataat cattgccgca attcttgcgt taaatgggtg
    15421 cttgttcttc ggatcgactc gcaccatatc accgccagta atcgctttca atccgccacc
    15481 atctccagcg tatttcgttt gctcggaaca gataatcagc tttttatctt ccagccctgc
    15541 gattttgcgt tcatcatcaa agttttctag ccttgctgaa gctgtgttct tttctccagc
    15601 taatagtgtc gcaatgccag caaataccga tttaccgctt ccgcctttcc ctgttacttg
    15661 gaagaatact tgccagttgt agcggtttgt taaaatcgca tagagagcgg ctagaatgtt
    15721 cttcgccttg tcttgcttgc cgtctgatac aaagttaagc cattgatcaa agtgtggtgt
    15781 ttcggctacg ttctcgtcat agctatgtgg aatataagcc gttagccagt tttggcggtt
    15841 aacggttctt tgaacattta ccgaataagg tgggtaaggg gttaaagttt cgggttgccc
    15901 cttgctattc caaccaatca ccgtagccgg ttgtacttcc attttttgaa gcgtgccgaa
    15961 tggtcgggtt ttatcgttgg ctgtcgtgcg tggataagct aagaagcctt tagcttgttt
    16021 tgtgcctgta ccgttggtta aatcggtttc ttcagtttcg acaaaggatt ctgaaatttc
    16081 ttcagtcagc cagcctagaa tatctacacc accaaagtct aaaatctctt gcgtggtttt
    16141 cgggtaagcg taaatattat gaacggcaat cgttacttca ttcattttcg gggtggcggt
    16201 ttcggtgcgt gcttcgcctt caccgatatg atttaccgct gcaccgccag ccgatactaa
    16261 ttttttatat tctttgcctt gggtcagttt caccacgtta gcaatttgtc gcataacaga
    16321 atcatctgtt aggcgtttca ttacttgctt gtcaagttcc ggaatcactg aatagccacc
    16381 gtctgcccct ccatttgtat tcgtagcaag cgaacgcaat tcgcctgttt taatccagtg
    16441 gcgaagctcg tcatcagata ctttcacatt tgcggtttca acctgttgcc ccggttggtt
    16501 acgctgttca tcagtaatcg cttcataacg tgcgatttct tttactaaat tttcagcttg
    16561 tgagcggagt tcatcaaact tagccccttc tgcttcagtt gttgagcgtt tttcttcgtc
    16621 tgctttggtt aaaattgaac gcatttctgc ttcaatagcc gctttttgtt ggcggagttc
    16681 taaaagtttt ttaaacattg ccttatcctt aattcaaata attgatattg tagtgaagcg
    16741 ttgctgtttt ccacgctgat tcgttagcat cataatcata gctatactta gccagcacac
    16801 attcgtccat actgtggaat gtggcttgat tcatcacatc actgattttt tgagccacta
    16861 aatctaggtc gttttcggtt gaaaacattg gtaagtaaat gccgattttc aaataggcgt
    16921 tgcattcgcc atcgcaaagc gtgagttggc tatattccgc ttcatcaatg aatacggcga
    16981 tagccggtaa ttcattttct acatcggtga atacggctcg gccgttatgg aaatgttgaa
    17041 tgccttgaat gttaccttgt aataagtcga taacttcttg gcggattgct tcgttagaaa
    17101 tcataaaaaa gtcctcttaa ttaagaaggc tacaattagc cacagaacaa tataggcata
    17161 atttcaacgg agtaaatagg gtaaaattta atcgtttagc tacgtttgaa cacgttaaga
    17221 ggataatttt taaatgatta ttttttattc aacaaaagac aaaatggaag gaaataaacg
    17281 aataatttta tagaagtgat gactgtgact acttagtgac gacttaaaaa
//
LOCUS       DANLXO010000054        17156 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.054, whole genome shotgun sequence.
ACCESSION   DANLXO010000054 DANLXO010000000
VERSION     DANLXO010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17156
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.054"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            78..2009
                     /locus_tag="PXD69_001475"
     CDS             78..2009
                     /locus_tag="PXD69_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6283670.1"
                     /translation="MIFFTDLILKRGHSVLIDNSSVTIHTGQKVGLVGKNGCGKSSLF
                     ALLKNELQPEGGDVSLPKNWAISWVNQETPALAISALDYVIQGDREYTHLMAELDIAN
                     EKNDGNRIAIIHTQLDTIDAWTIQSRAATLLNGLGFSTEQLQLPVKSFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLERWLSNYRGTLLLISHDRDFLDPIIDRVIH
                     IEHQKLNEYTGNYTSFEIQRATKIAQQNAAYQQQQRKVAHLQSFIDRFKAKATKAKQA
                     QSRIKALEKMELIAPAYADSPFEFEFRPPLALPSPLLMMEKVSAGYAEKTVLESVKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELPPQNGSIQLAKGVQLGYFAQHQVDTLRFDE
                     SPLWHLQKLAPEKTEQELRNYLGGFDFKGDKVVQAVKSFSGGEKARLVLALIVWQRPN
                     LLLLDESTNHLDLEMRQALVDALTYYEGSLVVVSHDRHLLRSTVNEFYLVHDRKVEKF
                     KGDLDDYQKWLNEQNALANEPKSVLAKDSANSTACSSTNENSAAQRKEQKRLEAERRQ
                     QTAPLRKKITQLEKELEKATEKLNKLEAMLTESDIYEAENKAKLTETLAKQLEAKRLV
                     EEIEMQWLEAQEEFETMLR"
     gene            2288..2545
                     /locus_tag="PXD69_001476"
     CDS             2288..2545
                     /locus_tag="PXD69_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6283671.1"
                     /translation="MKNLRLSIHSSEHIWLRELFLKRRLELGLTQRTLGEKMGVLYSF
                     IGKVETGDRRLDIFEFIAYCKGLDLDPLSVLQEIEQQFPHK"
     gene            complement(2592..3212)
                     /locus_tag="PXD69_001477"
     CDS             complement(2592..3212)
                     /locus_tag="PXD69_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDL6283672.1"
                     /translation="MKLWYSTTSPFARKALAVIKHHQLDDKVEMLRVTKAMDPNSPHN
                     QDNPLGRIPALQRNCGRWLFGSLLISEYLDQKGNNTPLLPKEGKPRWAVLALHNLADG
                     IMENTMPTLLQERMARPENEWWVSRHEQLMERNIRSFRQLEEALQEFGTELNLGTLTA
                     VALIDWWAFRLDKIGYDLAKNYPNLTAWAEEMNNKYAILAETKPSM"
     gene            complement(3214..3867)
                     /locus_tag="PXD69_001478"
     CDS             complement(3214..3867)
                     /locus_tag="PXD69_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HDL6283673.1"
                     /translation="MTPTLPICYQHRDFIIINKPEGLSVHKDEAEIGLTELVARQLNV
                     KQVWLVHRLDKITSGLLILALNKEAAARFYHLFEQHKIYKTYWALSDKKPKKKQGRIV
                     GDMQKSRNGAWKLCHSKENPAVTQFISHSVEDSLRHFILQPKTGKTHQLRVAMKSLGS
                     PILGDKLYSGSQADRVYLHAYQLDFEYENEKISVQALPTSGHFWQKICKSNHIKHGE"
     gene            3916..4575
                     /locus_tag="PXD69_001479"
     CDS             3916..4575
                     /locus_tag="PXD69_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDL6283674.1"
                     /translation="MAVTIYLVRHGRTVWNLEGRLQGSGDSALVEEGIIGAKKTGIAL
                     KHIPFTAAYSSMQKRAQDTANYILAENERSNIPHFHHKGLNEFDFGSWEGMKSVDLQE
                     NDEYWVMKRTPAEYLAKANGGERFEQLYQRVTQAFNQIAELHQNDGKVLIVSHGMTLT
                     LLTAVLKGIAWQDFRNEEKHSFVFNTAITKVEVENGKVTVLEFNNTDHLDNVPTSQYK
                     R"
     gene            complement(4612..5658)
                     /locus_tag="PXD69_001480"
     CDS             complement(4612..5658)
                     /locus_tag="PXD69_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HDL6283675.1"
                     /translation="MSKQIFNEEELKTTEHFEPKQEFDLENAIIEEEEKAVEAELIIE
                     ESLKPSRFWIRVLLATLALFGVAVIAQSIQWLIDTFQQREWIYFAFSIVFFIVSLLGV
                     GAIISEWRKLVYLRNHQKNQQMSNQLLLEQLPSNDGEQAVKFCENIANQLNHLPSIAQ
                     AEQLWKSELNEAYNAKEVLYLFSENVLKPIDKQVKQMISRNAAENAVIVAVSPLAIVD
                     VLLMAARNIALVNKITKAYGMELGYISRLKLFKMVLKNMVFAGATEIATDVGMDFFSQ
                     NLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQANEKPRISAIRQELLTSVKNT
                     VFAKTETKEKVFSD"
     gene            complement(5658..6611)
                     /gene="dusC"
                     /locus_tag="PXD69_001481"
     CDS             complement(5658..6611)
                     /gene="dusC"
                     /locus_tag="PXD69_001481"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HDL6283676.1"
                     /translation="MNPIPNVILAPMQGVLDPFVRNLLTSVNDYDLCISEFVRVVDQR
                     LPKKTFYRLAPELYQGGLTDSGTPVRVQLLGQHPQWLAENAALAIELGSHGVDLNCGC
                     PSKTVNGSNGGASLLKDPELIYRATKAMREAVPSDKIVSVKVRLGWDSVSQCFEIADA
                     VEQGGANEITVHGRTKVDGYRAERINWQAIGEIQQRLSIPVIANGEIWDFESAKNCQK
                     ITACKALMMGRGALNTPNLSKVVKYNVPKMAWNEVLQLLFKYVQMENQFDTGFYHVAR
                     IKQWLRYLDKEYPQAVELFDILKTEHGYDGLKAHIEKAVEE"
     gene            complement(6689..7315)
                     /locus_tag="PXD69_001482"
     CDS             complement(6689..7315)
                     /locus_tag="PXD69_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HDL6283677.1"
                     /translation="MDSRSHIIPLFLAIVITVIAVWSGLNPTDRAVWYAEVIPIFIVF
                     ALLIITYPKFQFSGLAYFLMSLWLIMHLIGAKYTFANVPFEWANQFLTPILGEDRNHF
                     DRVAHYIIGFYSFPMAEWLLRKRKCGMGVAFFFSLFFIMSVAAAYEIIEWQYAVIEGG
                     NAGVEFLGSQGDIWDAQKDMLADTLGALTALMIYLIARPDLRIHDRHF"
     gene            complement(7315..8172)
                     /gene="djlA"
                     /locus_tag="PXD69_001483"
     CDS             complement(7315..8172)
                     /gene="djlA"
                     /locus_tag="PXD69_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HDL6283678.1"
                     /translation="MQFIGKIVGFFLGYQLFHGLFGGILGAFIGHLADKKLYELGSVR
                     SSLFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEADIELARALMARLKLDSAAQQLAQ
                     NAFTLGKEPDFPLRQVIQEFREACGARTDLLRFFVEVQMQAALQDGQLDVNEQQILFT
                     IAETMGMSRFQFEQMIAMIMAAQQFRNGGYYQQNGSYHQQSQGGYQGSYQQPAQPSIE
                     AAYTVLGVTAQDDQNTVKRAYRKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYD
                     LICKVKEWK"
     gene            complement(8220..8930)
                     /locus_tag="PXD69_001484"
     CDS             complement(8220..8930)
                     /locus_tag="PXD69_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6283679.1"
                     /translation="MWKNRQLFFGYAENRLLLLSRSITGLLGILCGVYIIDHLVLSDV
                     DMIGKLTSFILIILSAIFLKERASLLQWILCLIAFIGALFIIKPAVDIRFMPYLVGVI
                     GSVFAAIAYLCLRLLAKTKKVESPNTIVFFFSAFSTLILLPFVAIDYVVLTNLQTIYL
                     VLAGVTSAVGQFCVTTAYKYAAAKDISIYSYASVLFSAILGLLFFEQYPDMLSWLGYA
                     IIFVSSWLMFVLTKKQSK"
     gene            complement(9166..9651)
                     /locus_tag="PXD69_001485"
     CDS             complement(9166..9651)
                     /locus_tag="PXD69_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL6283680.1"
                     /translation="MKKFAKVLMVAVPAFALAACSSSSDDAAANAAANAAANAAANAA
                     GEFGGLTAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER
                     GTPEYNIALGQRRADAVKGYLAAKGANNTSTVSYGEEKPAVLGHSEADYAKNRRAVLE
                     Y"
     gene            complement(9678..10964)
                     /gene="tolB"
                     /locus_tag="PXD69_001486"
     CDS             complement(9678..10964)
                     /gene="tolB"
                     /locus_tag="PXD69_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDL6283681.1"
                     /translation="MKLFSRISGVIGIFSALLTTQVVADSDVRISIDEGVSMAQPIAV
                     VPFKASGVPADVAQIISDDLRNSGKFTPLERSQMPAQPGSAAEVVADQWSAIGIDNIV
                     VGQVSSTGGGYNVAYQLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKL
                     TQIRGAFRTKIAYVVQRGVSSYELRVSDYDGFNAFTITTSKEPLMSPEWSPDGSRLAY
                     VTFENKKAQVVVHDIRSGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVG
                     SGGGTPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMGGSGS
                     YNAKVSSDGKNLIMIAGDRVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKG
                     TSKVLQLVSADGRFKANLPGAGGHYKFPAWSPYLTK"
     gene            complement(10980..12203)
                     /gene="tolA"
                     /locus_tag="PXD69_001487"
     CDS             complement(10980..12203)
                     /gene="tolA"
                     /locus_tag="PXD69_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HDL6283682.1"
                     /translation="MKSQQDRLELAVIVSILLHILLIGLLLLGSLFTKTELAAAGGSG
                     GDSDSFEAVMVDTGQVAAEYGQLLAEKKGSKASKPKVEPKEEAVEEDVEDKPTPEEIQ
                     KQKQAELAAIQEKQRQQEIERQQKLQEQQKQEQAKQEELKKQQAEEATRKKAAEAAKL
                     KADAEAKRLEAAAKQAEEEKKAKEALEKKLEQQKKAEAEKKLKEQKELKEQQAKEAKE
                     AKEKAEKEAKAKAEKEAKEKAEKEAKAKAEKEAKEKAEKEAKAKAAAEAKAAQAKNNK
                     ALDDFLNSGDIGGGSSKGGNKNSAGSQGSGGTSGLGQGTNVDGNAYGQRIKKLIQSRY
                     RVDPSFAGKQCDVKIFLSRDGTITNYQVISGDKAVCDAAVSAIVATRKVPPAPSDAVY
                     NMFKSPTLDFSLKVK"
     gene            complement(12217..12654)
                     /gene="tolR"
                     /locus_tag="PXD69_001488"
     CDS             complement(12217..12654)
                     /gene="tolR"
                     /locus_tag="PXD69_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HDL6283683.1"
                     /translation="MSRRLKRNDIKSEINIVPFLDVLLVLLLIFMATAPIISQSVEVN
                     LPEDTHSQSVSNEDKTPVILEVAGVGEYKLKIDGNYVQSNGQENINESEVVAYAGEQF
                     QKDNNTLFLVAGDKVVPYEEIMKGITLLKDAGVKSVGLMTEGK"
     gene            complement(12796..13476)
                     /gene="tolQ"
                     /locus_tag="PXD69_001489"
     CDS             complement(12796..13476)
                     /gene="tolQ"
                     /locus_tag="PXD69_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HDL6283684.1"
                     /translation="MQTEFSLLSLFLEASIVVKIVMLILIVFSILSWAVIIQRSKILT
                     KAKKDSLAFEDRFWSGEDLNRLHQGLENRRDALNGSEQIFYVGFKEFTRLQQANPDAP
                     ESIIQGSTRAMNLALNREMESLENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAV
                     KQATLQSVAPGIAEALIATAIGLFAAIPAVMAYNRLNLRLGKVEQGYVNFIDEFTTLL
                     HRQAFSKR"
     gene            complement(13498..13899)
                     /gene="ybgC"
                     /locus_tag="PXD69_001490"
     CDS             complement(13498..13899)
                     /gene="ybgC"
                     /locus_tag="PXD69_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDL6283685.1"
                     /translation="MDFPIRVYYEDTDAGGVVYHSNYLNFFERARTEFLRQQHFSQQE
                     LFSQSLAFVVKRIEIDYKLPARLDDLLNVETTLSELKKATLIFKQRLWKDGDCLSEAN
                     VTVACVDLIKMKPVAIPDDIRQALQKSYFSI"
     gene            complement(14062..14349)
                     /gene="ybgE"
                     /locus_tag="PXD69_001491"
     CDS             complement(14062..14349)
                     /gene="ybgE"
                     /locus_tag="PXD69_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HDL6283686.1"
                     /translation="MIHKLYNLTAKGLLKALSFILAAVLFATIWVNSTAFALSFGGKT
                     PYLAMLVFYGMAILWVHGIGFEIRAAIWKVIFLPLLGYLIVIPALWILLVK"
     gene            complement(14349..14447)
                     /locus_tag="PXD69_001492"
     CDS             complement(14349..14447)
                     /locus_tag="PXD69_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CydX/CbdX family cytochrome bd oxidase small
                     subunit"
                     /protein_id="HDL6283687.1"
                     /translation="MFYVTWVLGVLLAIFFATVITISIEKTGKFDE"
     gene            complement(14462..15595)
                     /gene="cydB"
                     /locus_tag="PXD69_001493"
     CDS             complement(14462..15595)
                     /gene="cydB"
                     /locus_tag="PXD69_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDL6283688.1"
                     /translation="MIDYEILRFIWWILIAVLLIGFAITDGFDMGVLNLLPIIGKSNV
                     ERRIMINTIAPHWDGNQVWLLTAGGAIFAAWPTVYATSFSGFYIAMVLVLAALFFRPV
                     GFEYRAKIDNPKWRSAWDWGLFIGGFVPSLVFGVAFGNLLQGVPFEFNNINQSQYTGS
                     FFGLLNPFALVCGIISLMMLTTQGATWLQMKTTDELHNNSRKVAQVTASIVLVAFILA
                     GVWLYFKDGFVITSELDHNAQSLLTNKTVAVQAGAWFRNYAEMPVLWVVPALVVVGAL
                     LTIIASKANRSGLAFFSSSLMIVGVILTAAVSMFPFIMPSITHPEMSLTVWDATASHT
                     TLTVMLFVAGIFVPLVLAYTIWSYIKMYGRLDASYLEENKAAY"
     gene            complement(15608..>17156)
                     /locus_tag="PXD69_001494"
     CDS             complement(15608..>17156)
                     /locus_tag="PXD69_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDL6283689.1"
                     /translation="LDVVELSRLQFALTALYHFLFVPLTLGLSFVLVVMETLYVTTGK
                     EVYKDMTKFWGKLFGINFALGVTTGITMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMA
                     FFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIASEFNF
                     ETMRMELSSFSELVLNPVTQSKFLHTVTAGYVCGAIFVLGISSYYILKGRDLGFAKRS
                     FSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPNT
                     AEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSGN
                     YTEADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRVM
                     MLSGFLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQPW
                     AIYEMLPVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGRY
                     YFEQSTK"
BASE COUNT         5241 a         3762 c         3139 g         5014 t
ORIGIN      
        1 attttagttc acaaagcaat ggctttgctt ttttatgcta aaatacgcaa aatttttaac
       61 aaaatagacc gcttgcaatg atctttttta cagacttaat tttaaaacga gggcattccg
      121 ttctcattga taacagctcc gttaccattc acaccgggca gaaagtcggt ttggtgggaa
      181 aaaacggctg tggcaaatcc tctctttttg ccttactgaa aaatgaatta caacctgaag
      241 gtggcgatgt atcgttgccg aaaaactggg cgatctcgtg ggtaaatcaa gaaacgcctg
      301 cgttagctat ttcagcgtta gactatgtga ttcaaggaga tcgggaatat acccatctta
      361 tggctgagct agatatcgca aatgaaaaga atgacggcaa ccgcattgcg attatccata
      421 ctcaacttga taccattgat gcttggacaa ttcaatcccg tgccgctacc ctgcttaacg
      481 gcttggggtt tagcaccgaa caactgcaac tgccggtgaa atccttctcc ggtggctggc
      541 gtatgcggtt aaatttggca caagctctga tttgtcgttc cgatctgtta ttgcttgacg
      601 agccaaccaa ccacttagac ttagatgcgg ttatttggtt ggagcgttgg ctgagtaact
      661 atcgtggcac tttattgtta atttcgcacg accgtgattt tctcgatccg attatcgatc
      721 gggtgattca tattgaacat caaaagctca atgaatacac cggcaattac acctcgtttg
      781 agattcaacg tgcgaccaaa atcgcccagc agaatgccgc ttatcagcaa cagcaacgta
      841 aagttgctca tttgcagagt tttatcgatc gctttaaagc caaagcgact aaagcgaaac
      901 aggcacaaag ccgaattaaa gcgttggaaa aaatggagct tattgcccca gcctatgctg
      961 attcgccgtt tgaatttgaa tttcgcccac cgcttgcact gcctagcccg ttattaatga
     1021 tggaaaaagt cagtgccggc tatgcggaaa aaacggtgtt ggaatcggtc aaactgaatt
     1081 tggttcccgg ctctcgtatt ggtttactcg ggagaaacgg tgcagggaaa tccacgctga
     1141 ttaaattatt ggcgggcgaa cttccgcccc aaaacggctc aattcaactg gcaaaaggcg
     1201 tgcaactcgg ctatttcgcc caacatcagg tggatacact acgttttgat gaaagcccac
     1261 tttggcattt acaaaaactc gcaccggaaa aaaccgagca ggaattacgc aattatttag
     1321 gcggtttcga ttttaaaggc gataaagtgg tacaagctgt gaaatcattc tccggcggag
     1381 aaaaggcccg tttagtgctt gccttaattg tatggcaacg cccgaattta ctgctattag
     1441 atgagtcaac caaccattta gatttagaaa tgcgacaagc cctggttgat gcactgacct
     1501 attacgaagg ctcgctagtg gtggtttcgc acgaccgcca tttattgcgt agcaccgtga
     1561 atgaatttta tttagtgcac gaccgcaaag tggaaaaatt taaaggtgat ttagacgatt
     1621 accaaaaatg gctcaatgag caaaacgcct tagccaacga gccgaaatcc gtacttgcaa
     1681 aagattcggc aaattcgacc gcttgctcta gcaccaatga aaatagtgca gctcaacgca
     1741 aagagcaaaa acgcttagag gcagagcgcc gccaacaaac cgccccattg cggaaaaaaa
     1801 ttactcaact ggaaaaagag ttagaaaaag caaccgaaaa attaaataaa ctcgaagcaa
     1861 tgcttaccga aagcgacatt tatgaagccg aaaataaagc aaaactaact gaaacacttg
     1921 cgaaacagtt agaggcaaaa aggctggttg aagaaattga aatgcaatgg ttggaggctc
     1981 aggaggagtt tgagaccatg ttacgctagg gttctacaag atagcgcaag cgtccacgct
     2041 tgtgccattt aagggaacta tacacctcaa aaaaacaatg atcattaagc tagctttttt
     2101 ataaatttaa aaacctatag attaaataaa taatgatatt aatagtaaaa tcacgagtgc
     2161 aactacactg acgataataa aatcaggcat acttattctc cctataaaat gtggtaatgt
     2221 aactacaaat taattatata atgaacctaa aaaaggttca acattatttg tacctaatat
     2281 aggtgcaatg aaaaatctta gattatcaat acattccagc gagcatattt ggttaagaga
     2341 actattctta aaacgccgtt tggaactagg gctaacacaa cgcacattag gagaaaaaat
     2401 gggcgttctt tactcattta tcggaaaagt agaaacagga gatcgcagat tagatatttt
     2461 tgaatttatc gcttattgca aagggttaga tttagatcct ttatctgtat tgcaagaaat
     2521 tgaacaacaa tttcctcata aataaaggca ttgagttata actcaatgcc tttattttct
     2581 atgtcaaatc tctacatgct cggcttagtc tctgccagaa tggcgtattt attattcatt
     2641 tcctctgccc aagcggttaa atttgggtaa ttttttgcaa gatcgtagcc tatcttatct
     2701 aagcggaatg cccaccagtc aattaatgct actgcggtta atgtgcctaa attcagctct
     2761 gtgccaaact cttgcaatgc ctcttctaat tgtctgaacg aacggatatt gcgttccatt
     2821 aattgctcgt ggcggctgac ccaccattca ttctcggggc gagccatacg ttcttgtaat
     2881 aaagttggca tcgtattttc cataatgccg tccgccaaat tatgtaatgc caacactgcc
     2941 cagcgaggtt taccctcttt aggtaacagt ggagtgttat tgcctttttg gtcaagatat
     3001 tcgctaatta acaaactacc gaaaagccaa cgtccgcagt tgcgttgtag ggcaggaata
     3061 cgtcctaacg ggttatcttg attatgtggc gaatttggat ccattgcttt tgtcacccgc
     3121 aacatttcga ctttatcgtc taattggtgg tgtttaatca ccgcaagggc tttgcgggcg
     3181 aaagggctgg tggttgagta ccaaagtttc atactattct ccgtgtttga tgtgattgga
     3241 tttgcaaatt ttttgccaaa aatgaccgct tgtcggcaag gcttgcactg agattttctc
     3301 attttcgtat tcaaaatcaa gctgataagc gtgcaaataa acacggtcgg cttggctacc
     3361 tgaatagagt ttatcaccta aaatcgggct gcccaaactt ttcattgcca ctcttaattg
     3421 gtgagttttg cctgttttgg gttgcaaaat aaaatgcctg agcgagtctt caacagaatg
     3481 agaaataaat tgcgttactg ccgggttttc cttactgtgg cataatttcc acgctccatt
     3541 tctgcttttt tgcatatcgc caacaattct accctgcttt ttcttcggct ttttatcgct
     3601 taatgcccaa taggttttgt agattttatg ctgttcaaat aaatggtaaa accttgctgc
     3661 cgcctcttta ttcaacgcta aaatcagtaa acctgaggtg attttatcca gacggtgaac
     3721 cagccaaacc tgctttacat tcagttggcg agccactaat tccgttaagc cgatttcagc
     3781 ctcatcttta tgcacactca agccttccgg cttattgata ataataaaat cacgatgttg
     3841 ataacaaata ggcaatgttg gggtcatttt gctataatcc ttccaatttt tgactatttt
     3901 agcaaggaaa ttacaatggc tgttaccatt tatttagtac gacacggcag aaccgtgtgg
     3961 aatttggaag gcagattaca aggctcgggc gattccgctt tagtagaaga agggattatc
     4021 ggagcgaaga aaaccggcat tgcgttaaaa catattccgt ttaccgccgc ctattccagt
     4081 atgcagaaac gggctcaaga taccgcaaac tacattttag cagaaaatga acgcagtaat
     4141 attccgcatt ttcatcataa aggcttgaat gaatttgatt ttggcagctg ggaaggaatg
     4201 aaatctgtcg atttgcaaga aaatgatgaa tattgggtga tgaaacgtac accggcagaa
     4261 tatctggcaa aagcaaacgg tggcgagcga tttgagcaac tttatcaacg ggtgactcag
     4321 gcgttcaatc aaatcgccga gctacaccaa aatgacggca aagtgctgat tgtttcacat
     4381 ggtatgacct taaccttact cacggctgtg ttaaaaggca ttgcgtggca agatttccgc
     4441 aatgaagaaa aacatagctt tgtgttcaat actgccatta cgaaagtaga agtagagaat
     4501 ggcaaagtaa cggtgctgga atttaataat accgaccatt tggataatgt gccaacaagc
     4561 caatacaaac gataatatta agggcggaac attgtccgcc catagcattt tctaatcaga
     4621 gaacactttt tctttcgttt ctgttttagc aaataccgta tttttgaccg aagtaagcaa
     4681 ctcctgacga atagctgaaa ttcttggctt ctcattcgct tgaaaagcaa caggacgaca
     4741 aaattccatt gctttaatgc caaggcgagc agtgagtaaa cccacaccaa taccttgtgc
     4801 ggcacggagc gataatttcg ccgtaaggtt ttgcgagaag aaatccattc caacatcagt
     4861 agcgatttcg gttgcaccgg cgaacaccat atttttcagc accattttga acagttttaa
     4921 gcggctgata taacccaatt ccattccata ggctttggta attttattca ctaaagcgat
     4981 atttcttgcc gccattaaca acacatcaac tattgccagc gggctaaccg ccacaatcac
     5041 cgcattttct gccgcattgc gggaaatcat ctgcttaacc tgtttatcta tcggctttag
     5101 cacattttcg ctaaacagat atagtacctc tttggcatta taagcctcgt tcagttcgct
     5161 tttccaaagt tgctcggctt gagcaatgct cggcaagtga ttaagctgat ttgcaatatt
     5221 ttcgcaaaat ttgaccgctt gttcgccatc attggaaggc agctgttcca gcaataattg
     5281 gttactcatt tgttgatttt tctgatgatt tcgcaaatac accaactttc gccattcgga
     5341 aataatcgcc ccaacgccca acaagctgac aataaaaaag actatcgaga acgcaaaata
     5401 gatccactct ctttgctgga acgtatcaat caaccactga atactttgag caattaccgc
     5461 cacgccaaac aaggcaagtg tggcaagtag tactcgaatc caaaagcggg aaggcttaag
     5521 gctttcttca ataatcagct ccgcctcaac tgctttttcc tcttcttcaa taatcgcatt
     5581 ttcgagatca aactcttgtt taggttcaaa atgctcggtt gtttttagct cttcttcatt
     5641 aaaaatttgc ttactcatta ttcctccact gccttttcaa tatgtgcttt tagaccatca
     5701 tagccgtgtt cggttttcaa gatatcaaat aattctaccg cttgaggata ttctttatcc
     5761 aaataacgta gccattgttt gatgcgagca acgtggtaaa aaccggtatc aaactgattt
     5821 tccatctgaa cgtacttaaa caatagctgt agcacttcat tccacgccat tttcggaaca
     5881 ttatatttca ccactttgct taaattcggt gtgtttaacg ccccacgccc catcattaat
     5941 gccttgcaag cggttatttt ttggcaattt ttcgccgatt caaaatccca aatttcgccg
     6001 ttggcgataa caggaataga cagccgttgt tgaatttcgc caatcgcctg ccaattaatt
     6061 ctttctgctc gataaccatc aactttggtt cgcccgtgaa cggtaatttc attcgctccg
     6121 ccctgttcta ccgcatcggc aatttcaaaa cattggctaa cggaatccca acctaatcgc
     6181 acttttacgg aaacgatttt atcgcttggc acagcttcac gcatcgcttt ggttgcacga
     6241 taaatcagtt ccggatcttt taataacgaa gccccaccat tgctgccatt taccgtttta
     6301 gaggggcagc cacagttgag atctaccccg tgtgaaccaa gctcaatggc aagagctgca
     6361 ttttctgcca gccactgtgg gtgttgccct aaaagctgta cccgcactgg tgtgccggaa
     6421 tcggttaatc cgccttgata tagctcaggg gctaggcgat aaaaggtttt cttcggtaaa
     6481 cgttgatcga ccactcgcac aaattcggaa atacagagat cgtagtcatt cactgaagtt
     6541 aaaaggttgc ggacaaaagg gtctaaaacc ccttgcatcg gggcaagaat aacgttagga
     6601 attggattca ttggtaaaat aaaaaataca agcggttatt ttttctcaac attttgcaaa
     6661 aaattggcaa gaaacaaccg cttgaaggtt aaaaatgtct atcgtgaatg cgcaaatcgg
     6721 ggcgagcgat caggtaaatc atcagtgcgg ttaatgcccc aagagtatcc gcaagcatat
     6781 ctttttgagc gtcccaaata tccccttgcg agcctagaaa ttccacgccg gcattgccac
     6841 cttcaatcac ggcatattgc cattcaataa tttcgtaagc tgccgccacc gacataatga
     6901 aaaacagcga gaagaaaaat gctacgccca ttccgcactt gcgtttacgc agtaaccatt
     6961 ctgccatcgg gaagctgtaa aaaccgataa tgtaatgtgc tactcgatca aaatggttac
     7021 gatcttcacc taaaatcggg gttagaaatt gatttgccca ctcaaacggc acattggcaa
     7081 aggtatattt tgccccgatc aagtgcataa tcagccaaag cgacatcaaa aaataagcta
     7141 acccactaaa ctgaaattta gggtaagtga taattaaaag ggcaaaaacg ataaaaatcg
     7201 gtatcacttc cgcataccaa actgcgcggt ctgtcggatt taaccctgac caaaccgcaa
     7261 tcacggtaat aacaatcgct aaaaatagag ggatgatatg cgagcgtgaa tccattattt
     7321 ccactctttc actttacaaa ttaaatcgta cgccgcttga atttgttgag ctttctcttt
     7381 tgccaactcc atcatctcat caggcaaacc tttagcggct aatttatccg ggtgatgttc
     7441 gttcattaac ttacgataag cccgtttcac tgtattttga tcgtcttgtg cggttacgcc
     7501 taatacggta taggctgcct caatgcttgg ttgtgcaggc tgctgataac tgccctgata
     7561 gccaccttga gattgctgat gataactccc attttgctga taatagccac cattgcggaa
     7621 ttgttgagct gccataatca ttgcgatcat ctgctcaaat tggaagcgag acattcccat
     7681 tgtttcggca atcgtaaaca gaatttgttg ctcgttcaca tcaagttgcc catcttgcaa
     7741 ggctgcctgc atttgcactt cgacaaagaa acgtaataag tcagttcttg ccccacaggc
     7801 ttctctgaac tcttgaatga cttggcgtaa cgggaagtca ggctctttac ctaaggtaaa
     7861 ggcattttgc gctaattgct gggctgcact atctaatttt aagcgagcca ttaacgctcg
     7921 ggctaattca atatccgctt cagtaacacg cccttttgct ttcgcaatat gccccaacac
     7981 cgcaaaagtg gtttgggtga aaagcgattg gcgagttaaa tttttaccga aaagacttga
     8041 acgaactgaa cctaattcat agagtttttt atcggctaaa tgcccgataa aagcgccaag
     8101 tatcccacca aataaaccgt gaaaaagctg atagcccaag aaaaaaccga ctatttttcc
     8161 gataaattgc atttttttat ccttttatag aaatgaataa acgttattct aacaaaattt
     8221 tactttgatt gctttttagt taatacaaac ataagccagc ttgagacaaa aataattgca
     8281 taacctagcc aactcaacat atccgggtat tgttcaaaga acaacaaccc taaaattgca
     8341 ctaaatagca cagaggcata actataaatt gagatgtctt tcgccgccgc atatttatag
     8401 gcggtagtta cacaaaactg cccgaccgct gaagttaccc ctgctaacac taagtagatt
     8461 gtctgtaaat tggttagcac tacataatca atggcgacaa aaggcaataa tatcaaggtc
     8521 gaaaaggcag aaaaaaagaa aacaatggta ttaggtgatt ctactttttt ggtttttgcc
     8581 aataacctta agcataaata ggcaatggct gcaaacacag agccaatcac gccaaccaga
     8641 taaggcataa agcgaatatc aactgccggt ttgataataa aaagtgcccc gataaaggca
     8701 ataaggcata aaatccattg caggagagat gctctctctt ttaaaaaaat cgcagaaaga
     8761 ataattaaaa tgaacgacgt gagtttgcca atcatatcga catcacttag cacaaggtga
     8821 tcgatgatat atacaccaca taaaatcccc aataacccgg tgatggaacg gcttaataat
     8881 aacaaacgat tttctgcata accaaagaat aattggcgat ttttccacac aatataaccg
     8941 cttatcaatg ctgtgcgttg cgaaaaatcg ctttttgtgc aatcggtaca tcccccgaaa
     9001 gacgaagaaa agcagccata atcgcaaagc ttagtgccga caaaagcaca caaaaaatgg
     9061 ctttaaataa cggcgagagc gaattccaaa aattcatagc ataaaggctt ttaataaaaa
     9121 taaagccctg attattcagg gcttcaattt agaatcaact aagaattagt attctaatac
     9181 tgcacgacgg tttttcgcgt agtcagcttc tgagtgacct aatactgctg gtttctcttc
     9241 accgtaagaa acagttgaag tgttgttagc acctttagct gctaagtaac ctttaactgc
     9301 atctgcgcga cgttgaccta atgcgatgtt gtactctgga gtaccacgct catcagcgtg
     9361 accagcaata gttacgttac cttgagtttt tgctaataat tgagcgtgag cgtctaataa
     9421 ttgacggtat tcaccttcaa ctgcatagct gtcaaaaccg aagtatacag tgttgtattg
     9481 tgcttttaat tgttcagctg ttaaaccacc gaattcgcct gctgcatttg ctgctgcatt
     9541 tgctgctgcg tttgctgctg cgtttgctgc tgcatcatct gatgagctgc tacatgctgc
     9601 taatgcgaaa gctggtactg ctaccattaa tactttagca aattttttca tttgttgctc
     9661 ctaatagaga aatattatta tttagttaag tatggtgacc atgcagggaa tttataatgt
     9721 ccacctgcgc caggcaaatt agctttaaaa cgcccatctg cagacaccaa ttgtagcact
     9781 ttactcgtac ctttggtaga gctataaata accataatgc cattcggtga aatacttgga
     9841 ctttcgtcta agaaagttga actcagtact tctgtgccac ctgaagcgag atcgcgtttc
     9901 acaactctat caccggcaat catgattaaa ttcttaccat cagatgatac tttcgcatta
     9961 tagctaccgc taccgcccat tgggctagca ccaccacctg atgaactcat tctataaact
    10021 tgaggagaac ctgcacggtc agacgtaaag tagattgtgc taccatctgg agaccagctt
    10081 ggttcagtat tatttccagc attagcggtc aatttacttg gtgtaccacc gccactacct
    10141 acaacataaa tatttaactc accatcttga tttgaggcaa acgcaatgcg agaaccgtct
    10201 ggagagaatg atggcgcacc attatgtcct ttcaatgctg ccactacacg gcgagcacct
    10261 gaacgaatat cgtgaacaac aacctgcgct tttttatttt caaatgtcac ataagctaat
    10321 ctgctaccat ctggtgacca ctctggcgac attaaaggct ctttactggt tgtaatagta
    10381 aaggcattaa aaccatcata atcagatact cgtaattcat acgatgatac gccacgttga
    10441 accacatacg caattttagt tctaaatgca ccgcgaattt gggttaattt ttcaaatacc
    10501 tcatcactta ctgtatgcgc accttgacga atttgggctg ccggaacaat aaatgaacct
    10561 tgggcaatga caccacccgc tgtacccgat gtaccaagag tatcaattaa ttgataagcg
    10621 acattataac cgccacctgt gctactcact tggccaacta caatattatc aataccgata
    10681 gcactccatt gatctgccac cacttccgct gctgatcccg gttgagcagg catttgagag
    10741 cgttcaagcg gtgtaaattt accactattt cgcaaatcat cagaaataat ttgtgcaaca
    10801 tctgccggca caccgctggc tttaaatggc acaaccgcaa tcggctgagc catacttaca
    10861 ccttcatcaa tagaaattcg cacatcagaa tcagcaacca cctgagttgt caataatgct
    10921 gaaaagatgc ctattacacc cgatatacga gagaataatt tcatttgtag tcctctaaat
    10981 tatttaactt ttaaactaaa atcaagtgtt ggtgatttaa acatattata taccgcatct
    11041 gatggtgcag gtggtacttt tctagttgcc actattgcac ttaccgctgc atcacatact
    11101 gctttatcgc cactgataac ttgatagtta gtaattgtgc catctcgact taagaatatc
    11161 ttaacatcac attgttttcc ggcaaaactt ggatcaaccc gatatcgaga ttgaattaat
    11221 ttcttaattc gttgaccata tgcattacca tctacattag taccttgccc taagccactt
    11281 gtaccaccag aaccttgtga tcctgctgag tttttgttac cacctttact tgaaccacca
    11341 ccgatgtctc cactattgag gaaatcatca agtgctttat tgtttttcgc ttgggcggct
    11401 tttgcctcag cagctgcctt cgctttagct tctttctcgg ctttctcttt ggcttctttt
    11461 tctgcttttg ctttggcttc tttctcagcc ttttcttttg cttctttttc tgccttggct
    11521 ttagcttctt tttctgcttt ttccttcgct tctttagctt cttttgcctg ctgttccttc
    11581 agttcttttt gctcttttaa ctttttctca gcttccgctt tcttctgctg ttcaagcttc
    11641 ttttcaagtg cttctttagc ttttttctct tcttcagctt gtttagcagc agcctctaaa
    11701 cgcttagctt ctgcatctgc tttcagtttt gctgcttcag ctgctttttt acgagttgct
    11761 tcttctgctt gctgcttttt aagctcttct tgcttagctt gttcttgctt ttgctgttct
    11821 tgtagttttt gctgacgctc aatttcttgc tgacgctgtt tctcttgaat cgccgctaac
    11881 tcagcttgtt tctgtttttg gatctcttcc ggagtcggtt tatcttccac atcttcttca
    11941 acagcttcct ctttaggctc tacctttggc ttcgatgctt ttgagccttt tttctctgcc
    12001 aataactgcc catattcagc agccacttgc ccagtatcta ccatcacagc ttcaaagcta
    12061 tcgctatcgc caccactgcc accagccgca gcgagttccg tcttagtgaa aagagacccg
    12121 agcaataaca acccgattaa caatatatgc aataagatcg aaacaataac cgctagctct
    12181 agtctatctt gttgagattt cacacgttat ccttggctat ttaccttctg tcattaaacc
    12241 taccgatttc actccggcgt ctttaagtag tgtaatacct ttcataattt cttcataagg
    12301 tactacttta tcaccggcaa ctaaaaataa ggtattgtta tctttttgaa attgttcccc
    12361 tgcataggca acaacttctg attcattaat attctcttgc ccattacttt gcacatagtt
    12421 accgtcaatt ttcaatttat attcaccaac acctgccacc tccaaaatca ctggagtttt
    12481 atcttcatta gaaactgatt ggctatgcgt atcttccggt aaattaactt ctacactttg
    12541 actgataatt ggggccgttg ccataaaaat cagcaataat accaacaata catcaagaaa
    12601 tggaacaatg ttgatttctg atttaatgtc attacgtttt aaacgacgag acatatattc
    12661 ctctttacag gtgcttagca ccttaattga tctgaaataa ccggcacagt gtcccggtct
    12721 cgaataatgc ggttacaagc ggtctttttt acgaaaaact ttacaaattt tcattaaaaa
    12781 tcaaccgctt gtagattatc tttttgaaaa agcctgacgg tgtaataagg tcgtgaactc
    12841 atcaatgaaa ttcacatacc cttgctcaac tttacctaaa cgtaaattca aacggttata
    12901 tgccattact gcaggaatcg ccgcaaataa accgatagcc gttgcaatta atgcttctgc
    12961 aatacccggt gcgactgatt gtaaagttgc ttgcttaact gcacttaatc ccataaagga
    13021 gtgcataatt ccccaaaccg ttccgaataa accaatatat gggctgattg aacccactgt
    13081 gcctaaaaac ggaatgtagt tttctaaact ttccatttca cggtttaatg ctaagttcat
    13141 cgcacgggta gaaccttgaa taatcgattc tggcgcatct gggttcgctt gttgtaaacg
    13201 ggtaaattct ttaaacccaa cataaaagat ttgctctgaa ccatttaatg catcacgacg
    13261 attctctaaa ccttggtgta aacggtttag atcttcccct gaccagaatc gatcttcaaa
    13321 agcaagggaa tcttttttgg ctttagttaa aattttgctg cgctgaataa tcaccgccca
    13381 agacaaaatt gagaatacaa taaggatcag catcacgatc tttaccacaa tacttgcttc
    13441 taaaaataac gaaagaagac taaattcagt ttgcattaat aaaactccga atagttttta
    13501 aatagaaaaa taactttttt gtaatgcttg acgaatatca tcaggaattg caaccggctt
    13561 cattttgatt aaatcaacac aagcgaccgt aacatttgcc tcactcagac aatcgccatc
    13621 tttccacaat cgttgtttaa agataagggt tgctttcttc aattctgaga gtgttgtttc
    13681 cacatttaat aaatcatcta aacgagcagg gagcttataa tctatttcaa tcctcttaac
    13741 aacaaaagca agggattggc taaaaagttc ctgctgtgag aaatgctgct gtctcaaaaa
    13801 ttccgttctt gcccgctcaa aaaaattcag atagttggaa tgataaacta ctccgccggc
    13861 atcagtatct tcataataaa cacgaatcgg gaaatccata agcattattt ctctcattca
    13921 aaatgaaaaa acgcccaaaa tttaggcgca aattgtgaga tattttagga tcagaaatat
    13981 tgttatgcaa gtatattttt tggtaaattg caaaaatatt ttttatctat caaaaataaa
    14041 aatagagaca taaaaatgcc tctatttaac aagtaaaatc cataatgccg gaataacaat
    14101 aaggtaacct agaagtggta aaaaaatcac tttccaaata gcagctcgga tttcaaatcc
    14161 aattccatgt acccataaaa tagccatacc ataaaatacc aacattgcta aatacggcgt
    14221 ttttccacca aaagaaagag cgaaagcggt cgaatttacc caaatagttg caaataatac
    14281 agccgctaaa ataaaagaaa gggcttttaa caagcccttt gctgttaagt tatagagttt
    14341 atgaatcatt actcgtcaaa cttacctgtt ttttcaatgc tgatcgtgat gactgttgca
    14401 aagaagattg caagcaatac acctaagacc caagttacat aaaacatatt gtgtctcctt
    14461 attagtaagc tgctttattt tcttctaaat aactagcatc taaacgacca tacattttga
    14521 tatatgacca aatagtatat gctaatacta acggtacaaa gataccagca acaaataaca
    14581 ttacagttaa tgttgtgtgg ctagcagtag cgtcccaaac cgttaagctc atttctggat
    14641 gagtaattga cggcataatg aatgggaaca ttgatactgc agcagttaaa atcaccccaa
    14701 caatcatcaa tgatgatgag aagaatgcta aacctgaacg atttgctttt gaggcaataa
    14761 tagtcagtaa tgcacctact acaactaatg caggaacaac ccataataca ggcatttcag
    14821 cataatttct aaaccatgca ccagcttgaa ccgctacagt tttattcgtc aatagagatt
    14881 gtgcattatg atctaactcg cttgtgatca caaaaccatc tttaaaatat aaccatacac
    14941 ctgcaagaat aaatgccact aatacaatag aagctgtcac ttgtgccact tttcttgagt
    15001 tgttatgtag ctcatcagta gttttcattt gtaaccaagt tgcaccctgt gtggttaaca
    15061 tcattaagct gataataccg cacactaatg caaatggatt taataaacca aagaatgaac
    15121 ccgtatattg tgattggtta atattattaa attcaaatgg tacaccttgt aataagttac
    15181 cgaatgcaac accgaatact aatgatggaa cgaaaccacc aataaataat ccccaatccc
    15241 aagcactacg ccatttcgga ttatcaattt ttgcacgata ctcaaaacct acagggcgga
    15301 aaaataatgc tgcaagcaca agcaccattg caatatagaa acccgagaac gaagttgcat
    15361 agactgttgg ccatgcagcg aagatcgcac caccagcggt caataaccat acttggttac
    15421 catcccagtg aggggcaatt gtgttgatca taatacgacg ttcaacatta cttttaccaa
    15481 tgataggtaa aaggtttaat acgcccatat caaaaccatc agtaattgca aagccaatta
    15541 acaataccgc aattaagatc caccaaataa agcggagaat ttcataatcg atcatttcta
    15601 actcctatta tttagttgat tgttcaaaat aataacggcc tgtttttaat gcactagggc
    15661 caagacgacc atatttgaac attaaataca tttctacaac taagaatagt gtatataaac
    15721 cacacaataa gccgattgta aaccataaat cacctgttgt taatgcagag tttgacacac
    15781 cgacaggtaa catttcatag atagcccaag gctgacggcc atattcggca aggaaccaac
    15841 cagattcaat cgcaatccaa ggtaacggaa gaccgaataa caagcctctt aataagaaac
    15901 ggctactttc tactttacca cgcatatttt gaataaatgc tgtcgtaatc aagataagca
    15961 tcaagaagcc agataacatc attacacgga atgcccagaa tgtagggcct acatttggaa
    16021 ttgtattatc tgctgctttt tgaatttgtt cttcagtcgc atcaaccaca ttaggtgtat
    16081 attgttttaa caataaccca aagcctaaat ctttttgtac agctttaaat gcttctttat
    16141 ccgcctctgt ataattgcca gaacgtaatt tttctaatag tccgtaggct accataccgg
    16201 tacgaacacg ttgttcatta attacacgaa tatcttttag gcctttaatt tctttatcta
    16261 aagaacgggt tgcaataata ccagctgcat aaggaatatg aattgagaat tcatttttca
    16321 tttccgcagt atttggaatc acaaaagcat tccaagcagc tggagcaggc tgagtttcga
    16381 attcaccttc cattgcagct aatttagtcg gctgagcttt accgatttca taaccagatt
    16441 catcacccat aatcagtaca gagatgatcg caattaaacc aaaacttgca cctactgaga
    16501 atgaacgttt tgcaaagcct aagtcacgac cttttaagat atagtatgaa ctaataccta
    16561 atacaaaaat agcaccacaa acatagcctg cggttacagt atgtaagaat ttagattgtg
    16621 taactgggtt taatacaagt tcagagaaac ttgaaagctc cattcgcatg gtttcaaagt
    16681 tgaattcaga agcaatcggg ttttgcatcc aaccattagc aactaaaatc catagtgcag
    16741 agaagttaga accaaacgca acacagtaag ttgctaataa atgtttcgct ttcgataaac
    16801 gttcccagcc aaagaagaac aagcccacaa aggtagattc taagaagaac gccattaaac
    16861 cttcaatcgc taatggagcg ccaaaaatat cacctacata atgagaataa tatgaccagt
    16921 tcataccaaa ctggaattcc attgtaatac cagttgttac ccctagggca aagttaatac
    16981 caaataattt accccagaat ttagtcatat ctttatatac ttctttaccc gtagttacat
    17041 acagggtttc catcaccaca aggacgaaag aaagacctaa tgtaagcggt acgaataaga
    17101 agtgatagag tgcagttaga gcaaactgca aacgtgagag ttcaactaca tctaac
//
LOCUS       DANLXO010000055        16998 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.055, whole genome shotgun sequence.
ACCESSION   DANLXO010000055 DANLXO010000000
VERSION     DANLXO010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16998
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.055"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..373
                     /locus_tag="PXD69_001495"
     CDS             <1..373
                     /locus_tag="PXD69_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="23S ribosomal RNA methyltransferase Erm"
                     /protein_id="HDL6283690.1"
                     /translation="NANIILGQFSYKDFTDINLEDRHAWKDFLAFVFLEKGVTFKEKT
                     KRIFSYKQQKIILKESRINDDSNISNWSYEFWLKMFKLYNSNMVSKDKKVLVNNSYKR
                     MLEHESSLEKIHRNRKQNNRK"
     gene            complement(488..1459)
                     /locus_tag="PXD69_001496"
     CDS             complement(488..1459)
                     /locus_tag="PXD69_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002337518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30-like element ISApl1 family transposase"
                     /protein_id="HDL6283691.1"
                     /translation="MSTSYRHLTINEREKIMILLAQGKKQAEIAKALGRSSSTISREL
                     KRHALESYSATNAQNSYLKHRQNSKAQRKLEQPEYFNLVQEKFLTENWSPEQISARLK
                     LEKSELSISYSTIYRGIYSGLFDIGERKASRKLRHKGKTRHTKNHHEKRGKIQISNHL
                     NDRPISAQNRSRFGHWKADTVLGKAGGACLLTLTERKSRFELVKKIPAKKAEAVQKAM
                     IELLDSHILRSITPDRGKEFAQHRLVTEALGVEFYFPEPHQPWTRGTNENTNGLLREY
                     FPKHQDINQWSEVDIQQVVNKLNLRPRKCLGWKTPYEVYFKKTLHLV"
     gene            complement(1640..2404)
                     /locus_tag="PXD69_001497"
     CDS             complement(1640..2404)
                     /locus_tag="PXD69_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL6283692.1"
                     /translation="MLIEWRNQIVGDKIKAVTWNNYVRHLKSLYNFGLSQGVLNINQN
                     PFNQLFIRESKRRKKTYSTEQLHKIDHILNNNILLPDFLKPSWFILAIIMTLRCTGIR
                     RGQLVKLKIGDVNLSNRTIYISPEINKNHDYHIVPISDSLYLHIERLITELKIRKQTD
                     NCQLFNLNLFSRCSRRRGQPMSQNQLTHIFRHISDLVGFTSSPHRFRHTVATQLMKKP
                     ENVYVVQKLLGHKDISVTLGYIEHDVEMLRETVNLL"
     gene            complement(2560..4539)
                     /locus_tag="PXD69_001498"
     CDS             complement(2560..4539)
                     /locus_tag="PXD69_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL6283693.1"
                     /translation="MQSIFKKIFGKHTSQSAVKSDTVFSIEQDDDGWLYPQNATQLLN
                     TELRQKYLGLLWQQVSMNRQMFETFYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKARQSYILPPNVAPEEQSKQRDAWTAAAIYLALVHDIGKVVVDIEITLKD
                     GSRWFAWNGEPPEPYKFKYIKGRDYHLHLVIGSFFANQIIPKSAFDWLAQYPEVISSL
                     MYAMSGHNDKAGLLSEIVQKADQYSVTLALGGDVNKLVQRPVNSLSKQLVLALRYLLE
                     QKIKLNTPKGPADGWFTEEGLWLVSKTAADNIRTYLLGQGISVPKDNPKLFDEMQSLG
                     IVEESPSGGAIWSCRIQADSGWTPANVFTLLRIKPEVAWENINDRPNYFSGKVKIVEQ
                     IMEDSNMENHPPLVDESTKLVTLENVQPETIITSKEVEISQVEASSDNAPFSEIIIND
                     ENDLTSFVLDMFAPTESSEPSLADISIGKGQEIATMPSKQEVQDKPTTKKLNVTQSAV
                     ETPETLTLSELQSQNKENSITGDNFVNWLKSGIATNKFAINKPTAKLHIVEDHLFLVT
                     PVIFEMYLQESGLPYDKEMINSLQYDFQGLGIHLPKNTTINGKPDTINFWKCDVIGPR
                     KTSSLTGYLIKNTHLFFGDKTLLNNHCLTLQKEET"
     gene            complement(4967..5764)
                     /locus_tag="PXD69_001499"
     CDS             complement(4967..5764)
                     /locus_tag="PXD69_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL6283694.1"
                     /translation="MENFEKQFISLFQRIVPHYRRSEVFYDFITLSALDMYLVTYRDQ
                     AEPNLRERFAHAKARYSDSEFTQLAELLAVTVNALTQKRYDFLGSVFMNLNLGDGYRG
                     QYFTPSHIADLMAKVTLQDCDRIISQQGFVTLSEPTCGSGVMVIGCVNAMFDAKYNPQ
                     QQLWVHCQDVDFTAAMMCYIQLSLLHIPACIVVGDTLLNETKIQMYTLAHLMGNWSHK
                     LEQQIAPLVNSTTEKGCGNNIEKSVIVEDLSQISILDEIDDNELIFY"
     gene            complement(5837..6583)
                     /locus_tag="PXD69_001500"
     CDS             complement(5837..6583)
                     /locus_tag="PXD69_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283695.1"
                     /translation="MPNWCENKLQIFCDCIQAKQIIPKLFRKTESDKWCLDFELLVPM
                     PESICIESSSLGDRAMEFLKISPNRRLTRPLLKKYIYGSEIDRIYAKAKHHRWDVGHF
                     INWLIKRPEQQSILWLNLALGQQYLSNLAQHGYKDWYDWSNEQWGCKWNVCSDSCQVS
                     FNDNGSINCLFDTPWGPPDGWFQALCTAFPDIEFILSFFEPGMWFAGKYIANLDGSYC
                     NIYIDDRGIRSFAEEVFNEEFEDEFEEKLE"
     gene            complement(6723..7697)
                     /locus_tag="PXD69_001501"
     CDS             complement(6723..7697)
                     /locus_tag="PXD69_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL6283696.1"
                     /translation="MNTQTKFDLYQHITDRIVAALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEYGYKQSKWITAKKANELGGYIRKGEKATVVMNYRPDK
                     REKLDEEGNIVYDEEGNPEIEQHFFIKKHNLFNLDQCENLPEELYDPISEPKQPTSDP
                     NQYEIFADIRQIIKGMDLHVEMKPSNRAYYQPSADLVVMPEIKQFENAQAFHSVLLHE
                     MTHATGAAKRLDREGITSGKAKFGNKVYAFEELVAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVIKEDKRAIVRASGKAREACQYMLDALNISQLADKNEVFEEAA"
     gene            complement(7942..8349)
                     /locus_tag="PXD69_001502"
     CDS             complement(7942..8349)
                     /locus_tag="PXD69_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6283697.1"
                     /translation="MKHDLDLLKYTWDNRNLNNKAYQYLFHICIEPMRKGDWNRYTIW
                     LNNNGNLVNISAVVYEIVSSQQLKDDIKLWQDMQFHCRPVKVETTGFISFLLHQFFNG
                     ITHVLLEQGMITETEAAEKSYHFIAANSFQRLL"
     gene            complement(8465..9307)
                     /locus_tag="PXD69_001503"
     CDS             complement(8465..9307)
                     /locus_tag="PXD69_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283698.1"
                     /translation="MSGSVLNTYFKHALVKAGFPNCLNIEYSLSHCQGDGVAFYGRLN
                     TETLINLFNKLNPQKRTQKMFSNLLNHIESWEPHYGVDFEIIRNSFGYRYSHCNTMEL
                     SVRTADDLAFFYDRDARKEWYFPTSKVEKYKALWDGFIQDLGQYIKDTSCALESNGYQ
                     IIEASPYQTETIFKFNTENYLIELKRKSSEFYSESVDWLCGDVCDFEAMIEEILQGKL
                     CYADFVATVTDKESGIQLGSDEITGVSYSPTDHSLSGYRQELISNAIASARSNAARFA
                     YLHA"
     gene            complement(9385..9780)
                     /locus_tag="PXD69_001504"
     CDS             complement(9385..9780)
                     /locus_tag="PXD69_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283699.1"
                     /translation="MARKKIQYTETDLHLYSVLWNLRHAHDLFSVKLERETKFGKAFS
                     VFSRFDVCPSYGEVDITYLVVKAGIRKTLRGFAYVGGNGFSHSRHLMSTFMYLVREIL
                     VEHNWISETELYDQPISVYKFRAINFDKW"
     gene            complement(9879..10124)
                     /locus_tag="PXD69_001505"
     CDS             complement(9879..10124)
                     /locus_tag="PXD69_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6283700.1"
                     /translation="MLVHIRLSCIGDVLPTKLNEWTSEHQALQQEISHRALEAWQNRD
                     KDIKSVRFMQQMPSRQGLNFRFLSVSEQNGKLIVSRA"
     gene            complement(10196..10549)
                     /locus_tag="PXD69_001506"
     CDS             complement(10196..10549)
                     /locus_tag="PXD69_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283701.1"
                     /translation="MSQQTAGWDVIPFESSKTVKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFWTLLAAIIAF
                     VCGMAAVFGTQLSLI"
     gene            10923..11366
                     /locus_tag="PXD69_001507"
     CDS             10923..11366
                     /locus_tag="PXD69_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283702.1"
                     /translation="MKVSRFLGYCSIVTGVFSPLAQAQPNIIVYTTKMYPIQNSQLAS
                     QIYYLDQVENFEESISRNLSKSPEIAEQEMRAFFNSADWKAQEQQLKDAYQGVISGWQ
                     NGIKKVPAVFFDNPQSSPSVIYGTTDVQKALDEWHKWVKQQGESK"
     gene            11363..12304
                     /locus_tag="PXD69_001508"
     CDS             11363..12304
                     /locus_tag="PXD69_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283703.1"
                     /translation="MKKTFLTILISASLAVPTTLYPQPARASLNTASIAASSASTSCL
                     EYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNHDGQTPWTELQALNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGNTGYYCKTQTTPFMPYFLSGLDFFA
                     WRENMPEMFYPEALTPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     SRTAQPHIYFPAAKTGGAGEWPPGPVEEGQARTHKWQILYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            12322..14334
                     /locus_tag="PXD69_001509"
     CDS             12322..14334
                     /locus_tag="PXD69_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL6283704.1"
                     /translation="MKSHFNFKKSHLRITTALLSSVSGLSYADSITDKLEFSKSDSII
                     SDRVFYQIGGGMGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMVLQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSSQPDAKQAQKDLEDKKGKDGRVWIGGQKKGGENQ
                     EAINVVGDVVKAGFNLLNKRNALDTSTISGSSCDGNLCQTWDNPQTAADFLTKIIGEQ
                     SISTCKEDCGTKTSSKAGVGLSPEIEEEHVRTIVKLENVLNMDVPKAELLADLSSTTV
                     PVTRGLIESLRDDPDVEVLSQRLSAEIATSKIMEKMLLARRAVLAGMREPNVAQNADA
                     QVELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLD
                     KRVQGLENGNVALTDLEAGSNINLSRRNIALSIPNIPNVAALIPNLPNRGGSGVGGNF
                     PSLAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTIVKVTKDT
                     VITKEDAERDLARRTAIFANNVRKELGDSNWNALPPNAQAVLVSYAYNYGSLAKTKSV
                     LDAARRSAQSGDMNALATAIRNRQVDNNGINARRRNQEADYILGKN"
     gene            14355..14783
                     /locus_tag="PXD69_001510"
     CDS             14355..14783
                     /locus_tag="PXD69_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283705.1"
                     /translation="MRKLLGITVLTLCTTSAFATDKNVVFSCTSTEGKPLTVKRVGND
                     YEYSYDKTIFKNPIKKAVTNDGSIIARGSGFTTYALELKNDGLKYVVGFVQPNGNSKE
                     FIEPGATISRDNDQPSIGSVDCDPYKKIYYKFDVHLMNTL"
     gene            14999..15469
                     /locus_tag="PXD69_001511"
     CDS             14999..15469
                     /locus_tag="PXD69_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283706.1"
                     /translation="MDITTQNIELRYLSEQFYLDVAPHLKEILLKETRPYCVLLVRVK
                     NLDFALPLRSNLPEREGVGIKTIPNPQEYGKFKGIDFSKAILLTDKSYLKTDTVQLKN
                     KSELLNIQGNERRIVREFKKYVSEYITAHKNGYKLDHKFEYTTLINYHTELKIS"
     gene            15490..15831
                     /locus_tag="PXD69_001512"
     CDS             15490..15831
                     /locus_tag="PXD69_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283707.1"
                     /translation="MKFIDFGKQLANPVKFIKQNTAFLPKPIQQVVVFAVIFAGLPLF
                     ILGFFILRIWAYKHISLYSEYKDMANSEISSKDTDLKSLFSDDEEQEDDEYQYGYDGP
                     GIYLGNYRVDE"
     gene            complement(15877..>16998)
                     /locus_tag="PXD69_001513"
     CDS             complement(15877..>16998)
                     /locus_tag="PXD69_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL6283708.1"
                     /translation="QMNSELGDQQARVPIWWGLFHQINKGVTHALTASIPCKPDLRQV
                     RFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQNSQLSLSPAQVRETSWLGGRILIA
                     NSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANNGLKDRLLDDVK
                     QNFSAKVIDFFSSKENSDESILRTVLRAENMDISRGKVYPGYGGNLDRSFTNEVTKTA
                     SMFGLSLGSIGAFPAFDSMRQALPMVHSFALMALIILTPLIMVMSGYSLKTLVTLTFV
                     NFALVTLTFWWELARWLDSWLLSVLYDSGTHSRINPYFLENTQDDIIVNFVMGSMFLV
                     LPAIWLGSMSWVGVKMGEFASHLTTGSRDSKTAGSKIGK"
BASE COUNT         5293 a         3239 c         3212 g         5254 t
ORIGIN      
        1 aaacgcaaac attattttgg gccaattttc ttataaagac tttacagata taaaccttga
       61 agacaggcat gcttggaaag attttttagc ctttgtcttt ttagaaaagg gagttacatt
      121 taaagaaaaa acaaaacgaa tttttagtta taagcaacaa aaaataattt taaaagaaag
      181 ccgaattaat gatgattcaa atataagtaa ttggagttat gaattttggc taaaaatgtt
      241 taaactctat aattcgaaca tggtaagcaa ggataaaaaa gttttagtta acaattcgta
      301 taaaagaatg ttagaacatg agtctagttt agaaaagatt catagaaata gaaagcaaaa
      361 taacagaaaa tagataaacg gcagataagg aaaagctaaa tgttaaaatt aaagctagaa
      421 aacataaaca aaactttcga tgggaaaaac tttgttgtta aaaattttaa tttggaagct
      481 tgaattgtca aaccaagtgc aacgtttttt tgaagtaaac ttcataaggt gttttccaac
      541 ccaaacattt acgcggtcgt aaattcagtt tattgaccac ctgttgaata tcaacttcgc
      601 tccactgatt gatgtcttgg tgcttcggaa agtattcacg aagtaaccca tttgtatttt
      661 cattcgttcc ccgtgtccac ggttgatgcg gctcggggaa gtaaaattct acacccagtg
      721 cttctgttac caaacgatgt tgggcaaatt ctttaccacg gtctggcgta attgaccgca
      781 atatatgtga atccagcaat tcaatcatgg ctttttggac tgcttcggct tttttggcag
      841 gaattttctt caccaactca aaacgacttt tgcgttccgt cagcgtcagc aaacaagctc
      901 cacccgcttt acccagtacg gtatcggctt tccaatgtcc aaagcgactg cgattttgcg
      961 ccgaaatggg acggtcgttc aaatggttgg atatctgaat tttgccacgt ttttcatgat
     1021 gattttttgt atgccgtgtt ttgcctttgt ggcgcagttt gcgactggct ttgcgttcgc
     1081 ctatatcaaa caaccctgaa taaataccac gataaatggt tgaataacta atggataatt
     1141 cagatttttc caattttaat cgtgcgctga tttgttcggg cgaccagttt tctgtcagaa
     1201 acttttcttg caccaaattg aaatattcag gctgctctaa tttgcgctgt gctttgctat
     1261 tttgacgatg cttcaaatag ctgttttgtg cgttcgttgc actgtagctt tctagagcgt
     1321 gtcgtttcag ctcgcgagaa atggtgctgg agctacgtcc cagtgctttg gcaatttctg
     1381 cttgtttttt gccctgtgcg agtaaaatca ttatcttttc tcgctcgttt attgtaagat
     1441 gtcggtagga agtactcatc atttggaagt ggtttttgtg tggaaacaaa attatattct
     1501 agttgatgag tacttctttt tttgttgcac ttggattgta aattcagcgt ataaaatcag
     1561 ttcatttaga agataaaaca gaaattattt atttatagaa aaaaagtggg agaaattata
     1621 ttctcccatt tttcttttat cagagtaaat tcactgtctc tctcaacatt tccacatcgt
     1681 gctcaatata acctagtgtt acgctgatat ccttatgccc tagaagtttc tgaaccacat
     1741 aaacattttc gggcttcttc attaattgag ttgcaaccgt atgtcgaaat ctatgtggtg
     1801 atgaagtaaa accgaccaag tcagaaatat gccgaaatat atgcgtaagc tgattttggc
     1861 tcattggctg tcctcttctt cgagagcatc gagaaaataa attgagattg aacaattggc
     1921 aattatctgt ttgttttctg atttttaact ctgtaataag cctttctata tgaagataaa
     1981 gtgaatctga aatcggtacg atatggtaat catgattttt attgatttct ggcgaaatat
     2041 aaatcgtcct gttggaaaga tttacatcac caattttcag tttcactaat tgtcctcgcc
     2101 gaatgcctgt acatctcaat gtcataataa tcgcaagaat aaaccaactt ggttttagaa
     2161 aatcaggtaa tagaatgtta ttattgagta tgtggtctat tttatgtaat tgttcggttg
     2221 aataagtttt ctttcttctt tttgattcac gaataaataa ctgattaaat ggattttgat
     2281 ttatattgag taccccttgc gatagaccaa agttatataa cgattttaaa tgtctgacat
     2341 aattattcca tgttacagct ttgattttat cgccaacaat ttgattacgc cattcaatta
     2401 gcatatcagt ggtaatctca tttgcattta actttgggta acgtcttttg ataattcgga
     2461 ttacattatt atagctccgc ttagtatcag ggcgaagata gtaacgatag aaaaaaaaat
     2521 cggtctagta gcgaatcaaa agagatagat gtcgtcattt taagtttcct ctttctgtaa
     2581 agttaaacag tgattattta atagtgtctt atccccaaag aagagatgtg tattttttat
     2641 caaatatcca gttaaagagg aagtctttct cggaccaatt acatcacatt tccaaaaatt
     2701 gatggtatct ggcttaccgt ttattgtcgt attcttaggt aaatggattc ctagcccttg
     2761 gaaatcatac tgaagactat ttatcatttc cttatcataa ggcagaccac tctcctgcaa
     2821 atacatttca aaaataacgg gggtaactaa aaacaggtgg tcttcaacaa tatggagctt
     2881 ggcagtaggc ttgttaattg caaatttgtt ggtcgcaata cctgatttga gccaatttac
     2941 aaagttatct cctgtaattg agttctcctt attctgtgac tgtagctctg atagtgttaa
     3001 tgtttcgggc gtttctactg cactttgtgt tacgttgagc tttttagtgg taggtttatc
     3061 ctgtacttct tgtttggatg gcatcgttgc aatttcctgt cccttaccaa ttgaaatatc
     3121 agcaaggctt ggctcagagc tttccgtagg tgcaaacata tccagcacaa aagaggttaa
     3181 atcattttca tcatttatga tgatttctga gaacggtgca ttatctgagc ttgcctctac
     3241 ctgagatatt tcaacttcct tagaggtaat aatagtctct ggttgaacat tctctaatgt
     3301 aacaagttta gtgctttcat caactaatgg aggatgattt tccatattgc tatcttccat
     3361 tatctgctcg actattttaa ctttcccgga aaaataattt gggcgatcat taatattctc
     3421 ccaagccact tcaggtttaa ttctcaataa tgtaaagacg tttgccggtg tccaacctga
     3481 atcagcttga atacggcaac tccaaatcgc cccaccagaa ggagattctt ctacgatacc
     3541 gagagattgc atttcatcaa ataactttgg attatcctta ggcacggaaa tcccctgccc
     3601 tagtaagtaa gttcgtatat tatcagcggc agttttgcta acaagccaca atccttcctc
     3661 ggtaaaccaa ccgtctgcag ggcctttcgg agtatttaac ttgattttct gttccagtaa
     3721 ataacgtagt gccaagacaa gctgctttga cagagaattg acaggacgtt gaaccagttt
     3781 atttacatcg ccaccgagtg cgagggtaac actatactga tcagcttttt gcacgatttc
     3841 agataaaagc ccagctttat cattatgtcc ggacattgca tacatcagag aagaaatgac
     3901 ttctggatac tgtgccagcc aatcaaatgc agatttggga ataatctgat ttgcaaagaa
     3961 gctgcctatc acaagatgaa gatggtagtc tcgacctttg atgtatttga atttatacgg
     4021 ttcaggaggt tctccattcc aagcaaacca acgtgagcca tctttgagtg tgatttcaat
     4081 atctactaca actttgccaa tatcgtgaac taatgcaaga taaattgctg cggcagtcca
     4141 agcgtctcgc tgctttgact gttcttcggg agccacattc ggtggcaaaa tataactctg
     4201 gcgagcttta gctgaaaaag caataacttc caaaccgtga tcgagcattc caccaatatg
     4261 agaatgatga tgtgattctg aagctggcaa tagttgaacc atttcagcgt aacgttctat
     4321 tggttgctga taaaatgtct cgaacatttg acggttcatt gatacctgtt gccaaagtag
     4381 tccaagatac ttttgacgta attccgtatt cagtaattga gtagcatttt ggggatatag
     4441 ccaaccatcg tcatcttgct caatagagaa aacagtgtca gatttgaccg cactttgaga
     4501 tgtgtgttta ccaaaaattt tcttgaaaat tgattgcatt gaaagagacc gaaaagtatc
     4561 aattttgtgt taaatgaaag ccgtttagcc ctttgccctt ttgggcaaga cctttcccct
     4621 tggaaaggtt acctttcacc ctttaggggt tatcctttgc ccttaaggac tcctttatcc
     4681 ttttgccatt tagggtgagc ttggaatata ttttgtagtg tataaatata tttctgttaa
     4741 gttatctaaa aactctcaaa tatttttaaa tagtttttgt atcaatttac actaatgcta
     4801 ggagaatata gactttaaat gctattgaca caattcacag agttaaatta aggtagtaaa
     4861 tgctgtcggc aatatcggtt ggtatcaata gtcaaatatt tattgaaaat tcagttgctg
     4921 atataaaata atttagccac cttatttcta aggcggctat tatttgttag taaaatatta
     4981 gctcattatc atcaatttca tctaaaattg agatttgaga taaatcttcc actatcactg
     5041 atttttctat attgttacca cagcctttct cagtagtgct atttacaagt ggtgcaattt
     5101 gttgctccag tttatgagac caatttccca tcaaatgagc cagcgtatac atttgaattt
     5161 ttgtttcatt caatagcgta tcaccaacta caatacaagc aggaatatgt aataacgata
     5221 gctggatata acacatcatg gcagctgtaa aatcaacatc ttgacaatga acccaaagtt
     5281 gttgttgggg attgtatttc gcatcaaaca tcgcattaac acaaccaatc accattacac
     5341 ccgaaccaca agttggttct gataaagtaa caaatccctg ttgtgagatg attctatcac
     5401 agtcctgtag tgtaactttc gccattagat ctgcgatgtg agatggtgta aagtattgcc
     5461 ctctataacc atcaccaaga ttgagattca taaatactga gcctaagaaa tcatagcgtt
     5521 tttgtgttaa agcattcacc gtaacagcta acaattctgc taattgagta aactcagaat
     5581 ctgaatatcg tgccttagca tgagcaaagc gttctcgcaa attaggttct gcttgatctc
     5641 gatacgttac taggtacata tcaagtgcag agagtgtaat aaaatcataa aacacttctg
     5701 aacgtcgata atgtggtacg atacgttgaa ataagctgat aaattgcttt tcaaagtttt
     5761 ccattagact actccttaaa gtttacggag taatccccct agggaattac ccctagggtg
     5821 gaaaaattaa ttaaggctat tcaagtttct cttcgaactc atcttcaaat tcttcattaa
     5881 agacttcctc agcaaaactg cgaatacccc tatcatctat gtaaatattg cagtatgagc
     5941 catcaagatt tgcgatatat ttgcccgcaa accacattcc cggctcaaaa aatgaaagta
     6001 taaactcaat gtcaggaaag gcagtacaaa gtgcttggaa ccaaccatca ggtggtcccc
     6061 atggcgtatc aaataggcaa ttaatagatc cattatcatt aaagctaact tgacagctat
     6121 ctgaacatac attccattta cagccccact gttcatttga ccagtcatac caatctttgt
     6181 aaccatgttg agctaggtta gacagatatt gctggcctaa tgcgaggttt agccataata
     6241 tactttgttg ttcaggacgt tttatcaacc agttgataaa atgacctaca tcccagcgat
     6301 gatgctttgc cttagcatat atccgatcaa tttcggaccc atagatatac tttttgagta
     6361 gagggcgtgt taaacgtcta tttggtgaaa tttttagaaa ttccattgct ctatcaccaa
     6421 gactacttga ttcaatgcag attgattctg gcattggaac gagtaattca aagtctaaac
     6481 accatttatc actttcagtt tttctgaaaa gcttaggaat aatttgttta gcttggatac
     6541 aatcgcaaaa aatttgtagt ttattttcac accagtttgg cataatgtac tcctaaataa
     6601 agtaggggta cacttgcctt gaggcaatgt accccaaggg ttaaaagata atcgatacat
     6661 aattcctaaa ggattatgta ttactatgaa agattgtgtt gaaagtacct ttcagcaaag
     6721 agttaagctg cttcttcaaa gacctcgttt ttatcagcca gctgtgagat atttaatgca
     6781 tctaacatat attgacaagc ttcacgagct ttaccagaag cccggacaat agcccgttta
     6841 tcttctttta taactcttat ccaactttca atatatgccg cattttgagg taccgtatca
     6901 aatccaaggt aggcacacaa aaatgctccc cccatttcgg caaccaactc ctcaaaagca
     6961 tagactttgt ttccaaattt tgcttttccg gaggtaatac cctcacgatc gagcctttta
     7021 gcagcaccag ttgcatgagt catttcgtgc aataacacac tatgaaacgc ttgagcattt
     7081 tcaaactgtt ttatttccgg cattacaact aaatctgcac tgggttgata atatgcccga
     7141 ttactcggtt tcatttccac gtgtaaatcc attcctttga taatctgccg aatatcagca
     7201 aaaatctcgt attggtttgg atccgatgta ggctgtttag gttctgatat aggatcgtac
     7261 agttcctcgg gtaaattttc acactggtct agattgaaca gattgtgctt cttaatgaaa
     7321 aagtgttgtt caatttctgg attaccttcc tcgtcataca caatatttcc ctcctcatca
     7381 agtttttctc tcttatcagg acggtagttc attacaacag tagctttttc acctttacgg
     7441 atatatccgc cgagctcgtt agcttttttt gctgtaatcc acttactctg tttgtaaccg
     7501 tattctgcgg tagcaatcca gagtaatagt gtgttgatac cagaatacaa tcggttagag
     7561 accgcattac gaggtaatgc catattacat tctggatgac tccacggttt taaccatggt
     7621 gcagtcccct gttccagtgc tgcaacaatt cggtctgtga tatgttggta taaatcaaat
     7681 ttagtttgag tgttcattag tgtttctcca aagttcaggt agaaaatggg gaaacactat
     7741 tacccttatc gggcactagt ttccccgatg ggtggtttaa aatctcaaca gagatagttt
     7801 ttctaggttc atcaaaacca gtagaactgc ctataatgca gtaactacag ataatttgtt
     7861 aatcagtatt gattcaagtt aaacataatc ctcatatcga aaattacttt ggtaatacaa
     7921 agttacatta tttcagatcc attaaagtaa acgttgaaag ctattagcag caataaagtg
     7981 ataacttttt tccgcagctt ctgtttccgt aatcattccc tgctccagca aaacatgggt
     8041 gattccattg aaaaactgat gtaatagaaa tgaaataaaa cctgttgttt caacttttac
     8101 tgggcgacaa tgaaactgca tatcctgcca aagtttaata tcatctttta actgttgaga
     8161 gctcacaatt tcatatacaa cagcagaaat attaactaaa ttaccgttgt tattcagcca
     8221 aattgtataa cgattccaat ctccttttct cattggctct atacaaatgt gaaataggta
     8281 ttggtaggct ttattattta aattgcggtt atcccaggtg tatttgagta aatctaaatc
     8341 gtgtttcata atgtttctcc aaaagaaaaa agtggagaaa catcttacct atagggaaaa
     8401 tatttcccca cagggtaaaa aacaatctcg ataagcggtc aaattgaaat aaaaaaccta
     8461 caaatcaggc atgcaagtag gcaaaacgtg cggcattact acgagcagaa gctatagcat
     8521 tactaataag ctcttgtcga taaccactca atgaatggtc tgtcggcgaa tagcttacgc
     8581 ctgtaatttc atcgctacct agttgaatgc cactttcctt atcagtaacg gttgctacaa
     8641 aatcagcata gcaaagtttc ccttgtagga tttcctctat cattgcctca aaatcgcaga
     8701 catcaccaca tagccaatca acagactctg aataaaattc agaggattta cgtttaagtt
     8761 ctatcagata gttttccgtg ttaaatttga aaatagtttc cgtctgatac ggtgaggcct
     8821 caataatctg atagccattc gattctaagg cacaggaagt atctttaata tactgaccta
     8881 aatcttgaat aaatccatcc cacagggctt tgtatttttc cacttttgat gtagggaaat
     8941 accactcttt tcgggcatca cgatcataga aaaatgccaa atcatctgct gttctaacag
     9001 aaagctccat cgtattacaa tgcgaatagc ggtacccaaa actatttcgt atgatttcaa
     9061 aatccacgcc atagtgaggc tcccaagatt caatgtgatt cagcagatta gaaaacattt
     9121 tttgtgtgcg tttctgagga tttagcttgt tgaaaagatt aattaacgtc tccgtattaa
     9181 gcctaccgta gaatgctacg ccatcgcctt gacaatgaga aagtgaatac tcaatgttta
     9241 agcaattagg aaaaccagct ttaacaagag cgtgtttaaa ataagtgttt aagactgagc
     9301 cagacattgc gcttctccta aaattagagg gaaacacatt acccttttcc ggaaattgtg
     9361 tttcccgaaa gggtgaaaga ttgattacca cttatcgaag ttaatcgctc tgaatttata
     9421 aacggatata ggttgatcat agagttctgt ttccgaaatc caattgtgtt caaccaagat
     9481 ttctctgaca agatacataa atgtactcat caaatgacga ctatgactaa acccgtttcc
     9541 accaacataa gcaaaccctc tcagggtttt gcgaattcct gctttaacaa caaggtaagt
     9601 aatatcaacc tcgccataag acgggcagac atcaaagcga gaaaaaacag aaaatgcttt
     9661 gccaaacttg gtctcacgct ctaatttcac actgaataga tcatgtgcat ggcgtaaatt
     9721 ccaaagtaca ctgtataagt gcaaatctgt ttcggtatat tgaatttttt tacgagccat
     9781 aatgtttctc ctaaaaaata aaagggaaac attacttccc tctggggata atgcctcccc
     9841 ttgtgaggta taagaatagg atgtgaatat gaagttgcct atgctcgact aacaattagc
     9901 ttgccgttct gctcggacac actcagaaag cgaaaattaa gtccttgccg agacggcatt
     9961 tgttgcataa atcgcacgct tttgatgtcc ttatctcgat tttgccacgc ttctaaagct
    10021 ctatgactaa tttcttgctg taaggcttga tgctctgatg tccattcatt aagtttagtt
    10081 ggtaaaacat ctccaataca ggaaagtcta atatgaacta acatacattt ctccagaata
    10141 aggggaaatg cattcccctt aagggaaaca acatttcccc gatgggtgag ttaaattaga
    10201 ttaaagagag ctgagtacca aaaacggcag ccataccaca tacaaaggca ataatggcag
    10261 ccaacaaagt ccagaaaaac atcttacgct taatgcggga aatttcctgt tcatattcgg
    10321 ctgcttgttc gtctaagcac atttgcagtt ctaaggctcg catttcatct tcttcagcaa
    10381 tccgttgatt gatgcctttg gtgacttcaa catacttgct tttggcttta tgtttcgctg
    10441 aaacaaaaat attacctagc ttgttgccaa gtttccaaaa aagagaaggt tttacggttt
    10501 tggatgattc aaacgggata acatcccatc ctgcggtttg ttgactcata gcgagttctc
    10561 ctaaaagtta agtgaataaa attcctcagg agatcgcaat tccaagggaa ttgaaatatc
    10621 cctcggaagg taggtgtgta ggtagcattc ctgcaaattt gcagagttcc ctttcagaat
    10681 gctgggagac attttgggta aataactcaa ctacctctaa ggatagccgc cgcttttcaa
    10741 gagttatgcg acttttaagg gctgtatcta cagcgtctta atgcttaata tcatacgaat
    10801 tcctccaata aaatcaaccg tttttttgtt caaaaaatat ctcttttttg aaaagagttt
    10861 ttcctatcct caacataaaa atctcgctaa ttttctgctt atttgttcgg gaggagagcg
    10921 tgatgaaagt aagtagattt ctgggatatt gcagtatagt aacaggtgtg ttttcgcccc
    10981 ttgcacaagc acaacccaat atcatcgtct ataccacaaa gatgtaccct attcaaaatt
    11041 cacaacttgc ttcccagatt tattatcttg accaagtaga gaattttgaa gagtcaatca
    11101 gtcgaaacct cagtaaatca ccagagattg ccgaacaaga aatgcgtgca ttctttaatt
    11161 cagcagattg gaaagcccaa gagcaacaat taaaagacgc ttatcaaggc gtgatcagtg
    11221 gatggcaaaa tggcattaag aaagtacctg cggtgttttt tgataatcca caatcttctc
    11281 cgagtgtgat ttatggtacg actgacgtac agaaagcatt agatgaatgg cataaatggg
    11341 ttaaacaaca aggtgaatca aaatgaaaaa aacgtttctt acgatactga tctctgccag
    11401 tttagctgtc ccaacaacct tatatcctca accagccaga gcctcattga ataccgcttc
    11461 cattgctgca tcaagtgcct caacaagctg tttggaatat aaagttgttg gaacctgttt
    11521 ttggttattt tgtacctact ttggatgtaa ggttcgcaca tcaaccaaaa ttaagcatta
    11581 tttacctgaa atggttgttt catcttataa ccacgatggg caaacgccat ggacagaatt
    11641 acaagctctc aatcctggtg taaaaggtgg agaataccgt tctccacaac gccaatactc
    11701 tcaactcact ttcaaaaatg cggatgcgtt tggacaccca caaggagcta tcggtcaatt
    11761 attaggaaat acggggtact attgtaaaac tcaaactacg ccatttatgc cttacttttt
    11821 gagtgggctg gatttttttg cctggcgtga aaatatgccg gaaatgtttt acccggaagc
    11881 tctgactccg ggaatgcggg aagttggccg tgtaggcgat agctggggaa atatttaccc
    11941 acgttccggt tgggtaaccc aagcacacga ttataaagcc tctgcgacca ttgtgcagag
    12001 agtggcagac attgtgagcc gaacagctca gccacacatt tatttcccag cagccaaaac
    12061 aggtggtgca ggagaatggc ctccaggacc ggtcgaagag ggacaagcaa gaacacataa
    12121 atggcaaata ctttaccctc aaatgtcaaa tacctgctct gtttttccta atggagggca
    12181 aacagatacc tattcttctc aaatttcaaa tcaaggtgat tatgcttggg cattatggcg
    12241 accttatagt tgttgcaaac gccgtgggca aacattcctt tacagtattg attggtcaca
    12301 ctaataacat tgggagcaat aatgaaatct cactttaact tcaaaaaatc ccacttacgg
    12361 atcacgacag cattattatc aagtgtatca ggactatctt atgccgattc gattacggat
    12421 aaactggaat ttagtaagtc ggattcgatt atttcagacc gtgtttttta ccaaatcggc
    12481 ggtggaatgg gttatatggc tccacctagt cgtggtaata ccaaagttgt tgatttagga
    12541 attggttgga aagcgaattt aacctgtggt aattttgata ttaaaacgac cattaaaaat
    12601 gatttaaacg gtctcaaaga cggctttaaa gatttaatgg ggaatgtcat tgattcagcg
    12661 aaaggtgcgg ttgcaagtat gcctgcaatg gtattgcaac gggccaaccc tcaactctac
    12721 gatttactca caaatggtat gtaccaaggt aagctggatt tcaaccgtct taaaaccagt
    12781 tgtgaagaaa tgtccaaagt tttagcagat catacactgg gaggaaaatg ggggcaagca
    12841 gctgatttag aaagctataa gcaaattacc tcctctcaac ctgatgcaaa acaagctcaa
    12901 aaagacctgg aagataaaaa agggaaagat gggcgagttt ggataggagg tcagaaaaaa
    12961 ggtggggaaa accaagaagc tatcaatgtt gttggcgatg ttgtcaaagc tgggtttaat
    13021 ttactgaaca aacgtaatgc cttagatacc agtacaattt caggttcaag ctgtgatggg
    13081 aatctttgcc aaacttggga taatccacaa acagcagccg attttttaac taagattatt
    13141 ggtgaacaat ctatttcgac ttgtaaagag gattgtggca ctaaaaccag ctcaaaagcc
    13201 ggtgtaggct tgagtccgga aattgaggaa gaacatgttc gtactattgt caaattagag
    13261 aatgtactga atatggatgt gcctaaggct gaattgttag ctgatttgag ttcaactact
    13321 gtaccagtaa caagagggct tattgagagt cttcgagatg atcctgatgt tgaggtatta
    13381 agccaacgct tatctgcaga aattgcgact agtaagataa tggaaaaaat gctcctggct
    13441 cggcgagcag tcttagctgg tatgcgtgag ccaaatgtcg ctcaaaatgc ggatgcacaa
    13501 gtagaactgg aaagagtact caatattatt gaccgtgaaa tttcccaagt aaaactagaa
    13561 atggatatgc aaaaaatgat caccggcaat acggcttcgg tgattttgca aagcaaatcc
    13621 gaacgagaag ctcttgctgg tgctcatagt ttatctcaag acagtctgga taaacgtgtt
    13681 caaggacttg aaaacggtaa tgttgcatta actgatttag aggcaggctc taatattaac
    13741 ctctctcgta gaaatattgc attgagtatc ccgaatattc cgaatgtagc tgctctcata
    13801 cctaatctgc caaatcgagg tggttcaggt gtaggtggaa atttcccatc actcgcacaa
    13861 atcagcggtt caacgatgga tcaagcaaca ggattactac gtaattttga aggctttatc
    13921 tctaaggctc aatgggatgt aaatgctcat cgagtaggat atggttccga tacaattacc
    13981 cgagctgatg gtacgatcgt aaaagtaacc aaagatacgg tcattaccaa agaagatgca
    14041 gagcgtgatt tggcccgccg aacagctatc ttcgcaaata atgtgagaaa agagcttgga
    14101 gattcaaatt ggaatgcgtt accgccgaac gctcaagctg ttttagtgtc ttatgcatat
    14161 aattatggtt cacttgctaa aacaaaaagc gtacttgatg cagccagaag atcagctcaa
    14221 agtggtgata tgaatgcttt agctactgca atcagaaatc gccaagttga taataatggc
    14281 atcaatgcac gtcgccggaa tcaggaagct gactatattc ttggtaaaaa ttaacctcat
    14341 aaggagttac atttatgcgt aaattattag gtattactgt acttacactt tgtacaactt
    14401 cagcatttgc aacggataaa aatgtggtat tttcttgtac cagcacagaa ggtaaacctc
    14461 tcacagttaa acgggtagga aatgattacg agtattcgta tgataaaact atcttcaaaa
    14521 acccaatcaa aaaagcggtg accaacgatg gctcaattat cgctagagga tcaggtttta
    14581 ccacgtatgc attagaactg aaaaatgatg gtttgaagta tgtagttggg tttgttcaac
    14641 caaatggtaa ctcaaaagag tttattgagc ctggagcaac gattagccgt gataatgatc
    14701 aaccaagcat tggctctgta gattgtgatc cttacaaaaa aatctattat aagtttgatg
    14761 ttcatttaat gaataccttg taatgcgata attcaataat atgggggaat ggcttgattt
    14821 ttcatccccc atactctatt atatagatgt ggtgctagag ccagcccacg ttaaaaaata
    14881 caaagctcgg tagatgaact attgtggtgc cagagccggc ccacgttaaa aaatacaaag
    14941 ctcggtagat gaggcccctt aagtcgtaag atttaagggg ttttgcttag gatataaaat
    15001 ggatattaca acacaaaata ttgaacttag atacttatct gagcagtttt accttgatgt
    15061 cgctccacat ctgaaagaaa ttttgcttaa agagactcgc ccatactgtg ttctattagt
    15121 tagagttaaa aatttagatt ttgccctacc attgcgttct aatttacctg aaagagaagg
    15181 agttggaatt aaaacgatac ctaatcctca ggaatacggc aaatttaaag gaattgattt
    15241 ctcaaaagcc attctactga cagataaaag ctatttaaaa acagataccg ttcagctcaa
    15301 aaacaaatca gaattgttga atatccaagg taatgagcgt agaattgttc gtgaatttaa
    15361 gaaatatgtg agtgaatata tcactgcaca taaaaacggt tataaattag atcataaatt
    15421 tgaatataca actttaatta attatcatac tgagctgaaa atcagctaat tagaataatt
    15481 ggaggagcta tgaaatttat cgatttcgga aagcagctcg ctaacccagt taaatttatc
    15541 aaacagaata ctgcattttt acctaagcct attcaacaag tggtcgtttt tgcggtaatt
    15601 tttgcaggat tgcctctatt tatcttgggt ttctttattc tcagaatatg ggcttataag
    15661 catatttctt tgtatagtga atataaagat atggctaatt cagaaatatc gtctaaagat
    15721 acagatttaa aatcactttt ttctgatgat gaagaacaag aagatgatga atatcaatat
    15781 gggtatgatg gaccaggtat atatctaggt aattaccgtg ttgatgagta aaagtaaata
    15841 gagtggtata taccactcta ttattcagtt gttagattat ttccctatct tggaacccgc
    15901 tgttttagag tctctagaac cagtagttaa atgacttgca aactctccca tttttactcc
    15961 tacccaagac atactgccta gccaaatcgc tggtaagacc aagaacatag aacccatcac
    16021 aaaattcaca ataatatcgt cttgtgtatt ttcaaggaaa taagggttta ttctgctatg
    16081 tgtgcctgaa tcatagagga ccgacagcaa ccaagagtca agccatctag ctagttccca
    16141 ccaaaatgtg agtgtaacta atgcgaaatt cacaaaagtt agcgtaacca atgtttttaa
    16201 cgaataacca ctcataacca taattaaagg cgtgagaata atcaatgcca ttaatgcaaa
    16261 tgaatgcacc atcggtaatg cttgccgcat cgaatcaaaa gcagggaatg ctccgatact
    16321 gcctaatgac agaccaaaca ttgaagctgt tttagtcact tcatttgtaa atgatctgtc
    16381 taaatttccc ccatacccgg gataaacttt ccctctcgaa atatccatat tctcagctcg
    16441 taatacggta cgaagtatgg attcatcgga attttcttta ctgctgaaaa aatcaatcac
    16501 ttttgcagag aagttctgtt ttacatcatc taataaacga tcttttaaac cattattcgc
    16561 cgtatcccac cactctgcac aatttggaaa accaccctct ccattattcg gcaatccatt
    16621 atcccgagaa gcattatagg gaaatagact atgaggttgt tgggctcgat aacggggata
    16681 aagctcgcta tttgcaatca aaatacggcc acctaaccag ctagtctcac gaacctgtgc
    16741 tgggctcaat gaaagttggc tattttgaat tttctgacgt gccggtacat agcattgttg
    16801 tacaaataag cgaacctctg tcaataatgc tggattattg attttctcgt gttgaacttc
    16861 aaaacgaact tgacgtaaat ccggtttgca gggaattgaa gctgttaagg cgtgtgttac
    16921 ccctttgttg atttgatgaa ataatcccca ccagataggg actctcgctt gttgatcacc
    16981 caattcagag ttcatttg
//
LOCUS       DANLXO010000056        16888 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.056, whole genome shotgun sequence.
ACCESSION   DANLXO010000056 DANLXO010000000
VERSION     DANLXO010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16888
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.056"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(71..1762)
                     /gene="dld"
                     /locus_tag="PXD69_001514"
     CDS             complement(71..1762)
                     /gene="dld"
                     /locus_tag="PXD69_001514"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDL6283709.1"
                     /translation="MSNNSLISQLTEIVGQSYIITDPTKTEAYRSGYRFGTGSAIAVV
                     KPTTLLEYWNVLKACVAADVIVISQAANTGLTGGSTPSGNDYDRDIVIINTMRMNGIQ
                     LINNANQVVCLPGSTLNELELLLKTHGREPHSVIGSSCIGASVIGGICNNSGGALVQR
                     GPAYTEMALFAQLNEDGTLELKNHLGIDLGDTPEEILENLQAQRYQRKDIQQACGKGH
                     DHAYCNHVRQIDEDSPARFNADPARHYEAAGSAGKLAVFAVRLDTFPLEKDTAVFYIG
                     TNHTDTLNDIRRYMLANFEVLPISGEYIHRDAFDIAADYGKDTFWVIKKLGTHRLPQL
                     FSLKAKVDRMAKKLTFLPANLSDKILQAISKMLPQHLPESLRDYRNQYEHHLIIKMGG
                     KGVQEARDYLARYFADTQKGGYLECNPTESQAAMLHRFAVASAAIRYRAIHDKEVEDI
                     VALDIALRRNDKAWFEVLPPEIESQITHKLYYGHFMCHVFHQDYIVKKGVDCLALEHQ
                     MLELLDKRGAQYPAEHNVGHLYEAKPTLRKFYRQLDPTNSFNPGIGQTSKKKYWK"
     gene            complement(1974..3071)
                     /locus_tag="PXD69_001515"
     CDS             complement(1974..3071)
                     /locus_tag="PXD69_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL6283710.1"
                     /translation="MFYSSNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTFYRYQQ
                     AVEQGGVEALLNQNRRVPNIKNRVDESTEKAVVQFALDNPAFGQVRVSNELRKQGIFV
                     SAGGFCLCRWFLSLQVVFVSAGGVRSIWLRHHLANFKQRLTALEKLVAEQGIILSEPQ
                     IQALERKKEDEIACGEIETAHPGYLGSQDTFYVGNIKGVGRIYQQTFIDTYSKVAFAK
                     LYTMKTAITAADMLNDKVLPFFESQRLPMLRVLTDRGSEYCGKVENHDYELYLAINDI
                     EHTKTKVKQPQTNGICERFHKTILQEFYQVAFRKRIYMDLEALQADLDEWLMYYNHHR
                     THQGKMCCGRTPMETLVDGKRIWAEKNLSSN"
     gene            3401..4117
                     /locus_tag="PXD69_001516"
     CDS             3401..4117
                     /locus_tag="PXD69_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL6283711.1"
                     /translation="MYLMYVDESGSTTDPTQKYFVLSGIAVFERNTHWIEKKMNVIAS
                     QFCQYSEGSDPYFYELHGSPMRSGKSEWRGIPMSERINAIQDCLKLVQSNNIRIFAAV
                     IEQGYSSGQDTITECFEQISSRFDMYLSRLHAQGNTQRGISIFDKSSTEKSIQALART
                     FKNSGHTYGKLRNFSEVPLFLDSKSSRLIQLADLVSYAIFRHYEHNDSSFYDIIRNNF
                     DYHNGRIHGLYLRNKEDIIS"
     gene            complement(4160..5078)
                     /locus_tag="PXD69_001517"
                     /pseudo
     CDS             complement(4160..5078)
                     /locus_tag="PXD69_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700778.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(5080..7065)
                     /locus_tag="PXD69_001518"
     CDS             complement(5080..7065)
                     /locus_tag="PXD69_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL6283712.1"
                     /translation="MHSILKKILGKSKSSSQSSVKSDNVFSIEQDSEGWLYPKNASQL
                     LNTELRQKYLGLLWQQVSMNRQMFEALYQQPIERYAEMVQLLPASESHHHSHIGGMLD
                     HGLEVIAFSAKVRQNYILPPNVAPEEQSKQRDAWTAAAIYLALVHDIGKVVVDIEITL
                     KDGSRWFAWNGLPPQPYKFKYIKGRDYHLHPVLGGFLANQLIPKSAFDWLGQYPEVIS
                     SLMYAMSGHNDKAGLLSEIVQKADQHSVTLALGGDVNKLVQRPVNSLSKQLVLALRYL
                     LEQKIKLNTPKGPADGWFTEEGLWLVSKTAADNIRAYLLGQGISVPKDNPKLFDEMQS
                     LGIVEESPAGGAIWSCRIQADSGWTPANTFTLLRIKPEVAWENINDRPNYFAGKVKIV
                     EQITEESNIETQSTLVDGTTKPAPLPSVQTGGIIASKEVEISQVETNSDNAPSSEIII
                     NDENDLTSFVLDMFAPTESSEPSLDDISIGKGQEIASMPSKQEVQDKSTTKKLKVTQS
                     AVETPETLTLSELQLQNKENSITGDNFVKWLKSGIATNKFAINKPTAKLHIVEDHLFL
                     VTPVIFEMYLQETGQPYDKETINNLQYDFQGLGIHSPKNTMTNGKPDTINFWKCDVIG
                     PRKTSSLTGYLIKNTRLFFGDKVLLNNHCLTLQKEET"
     gene            complement(7870..8853)
                     /locus_tag="PXD69_001519"
     CDS             complement(7870..8853)
                     /locus_tag="PXD69_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL6283713.1"
                     /translation="MNPQSNTQPKFDLYQEVTDKIIAALEQGTAPWLKPWDSVIPYGG
                     MPCNAISGRLYSGINVLLLWLSAAEHGYIQRKWITAKAAIEAGGHVRKGEKATLAVSY
                     RPYDREKTDDDGNLVLDDDGNPVIEHLASIKKHCLFNIEQCEKLPQDWYETVETPEQL
                     TDENQYAIFEEIRLMLKGMDLQVMVKPSNQAYYHPRNDHIVMPEMKQFHSPQKFHSVL
                     LHEMTHATGHQSRLARDGIVSGKARFGNKVYAFEELVAEMGCAFLCSHLGFADVPQNA
                     SYIESWIKVLREDKRAIFRASGKAREACQYMLDALNIAQLADKYEVFEEAA"
     gene            complement(8933..9088)
                     /locus_tag="PXD69_001520"
     CDS             complement(8933..9088)
                     /locus_tag="PXD69_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283714.1"
                     /translation="MEPRTVKVIYDDGDYFFTLINADEQTIRNYYAIGSSIGFDNTRK
                     IVAVEIL"
     gene            complement(9102..9515)
                     /locus_tag="PXD69_001521"
     CDS             complement(9102..9515)
                     /locus_tag="PXD69_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6283715.1"
                     /translation="MKNEHNLEQLKYIWDNRNLENKVYQYLFHICIEPMKKGDWNRYT
                     IWLNFHGNLINVSDVVYRVVESQKLKDDIKIWYDKQYYCRPTKVETTGFISIFLHLFY
                     EGIARILLEQGMITETEAAEKSYNFRAANCFQRLL"
     gene            complement(9630..10472)
                     /locus_tag="PXD69_001522"
     CDS             complement(9630..10472)
                     /locus_tag="PXD69_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283716.1"
                     /translation="MSDSVLNTYFKHALVKAGFPDTLDMEYSLSHCQGDGVAFYGRLG
                     TDDLIQLFNHLNPQKRKQKMFANLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMEL
                     YAKTADQLVFFNDSDARRNWYFPTSKVDKYKALWDGFIEDLEQYIKDISREMESVGYQ
                     IIEASPYQTETVFKFNTEKYLVELKRKPSEFYSELVDWAFGDMCDFEAAIEQICQGQL
                     CYADFEATVTDKKSEIQLGLARLSGISYSPNDRSFSGYRQELIGEAIASARHNAARFA
                     YLHA"
     gene            complement(10736..10978)
                     /locus_tag="PXD69_001523"
     CDS             complement(10736..10978)
                     /locus_tag="PXD69_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283717.1"
                     /translation="MFGKLFYKMNPKVLAKIGEDFRKAGYLMGAGFVGMVISNDQIST
                     SEGFVLFLWGLYIWIIGHIALHHSEKILNSKQGEPK"
     gene            complement(10987..11232)
                     /locus_tag="PXD69_001524"
     CDS             complement(10987..11232)
                     /locus_tag="PXD69_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6283718.1"
                     /translation="MSVHIKLSCVGDILPIKLNEWTPEHRALHHEISHKALEAWQNRD
                     KGTQSVRFMQQMPARQGLHFRFLSVSEQDGKLIVSRS"
     gene            complement(11304..11657)
                     /locus_tag="PXD69_001525"
     CDS             complement(11304..11657)
                     /locus_tag="PXD69_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283719.1"
                     /translation="MSQQTAGWDVIPFESSKTAKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFRALFVAIIAF
                     LCGMATVFGTQLSLI"
     gene            12032..12475
                     /locus_tag="PXD69_001526"
     CDS             12032..12475
                     /locus_tag="PXD69_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283720.1"
                     /translation="MKASRFLGYFSIVTVVFSVVAQAQPNIIVYTTKMYPIQNSQLAS
                     QVYYLDQVENFEEEISRNLSKSPEIAEREIRAFFNSADWKAQEEQLKDAYQGVISGWQ
                     NGIKKVPAVFFNNLQSSPSVIYGMTDIQKALDEWHKWVQQHGESK"
     gene            12472..13413
                     /locus_tag="PXD69_001527"
     CDS             12472..13413
                     /locus_tag="PXD69_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL6283721.1"
                     /translation="MKRAFFSVLLSVSLAVPTTLYPQQVKASLNTASIAASSASTSCL
                     DYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTELQSLNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGSTGYYCKSQTTPFIPYFLSGLDFFA
                     WRENMPEMFYPEALIPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     TRTAQPHIYFPAAKKGGVGEWPPGPVEEGQARTHKWQMLYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            13428..15434
                     /locus_tag="PXD69_001528"
     CDS             13428..15434
                     /locus_tag="PXD69_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL6283722.1"
                     /translation="MKSQFKFKKTHLLVITVLFSSTSSISFADSITDKLEFSKSDSII
                     SDRVFYQIGGGTGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMILQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSTQPDAKQAQKDLEDKKGKDGRVWVGGQRKGGQNQ
                     DPINVVGDVAKGGFNLLNKRNVLDSSPVSNCEGNLCQTWDTPQAAADFLTKIIGEQSI
                     STCKEDCGTKTSSKAGVGLSPEIEEEHIRTIVKLENVLNMDVPKSELLAELSSSSVPV
                     TRGLIESLRDDPDVELLSQRLSAEIATSKVMEKMLLARRAILAGMREPNVAQNADAQV
                     ELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLDKR
                     VQGLENGNVALTDLETGSNINLSRRNIALSIPNIPNVAALIPTLPNRGGSGVGGNFPS
                     LAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTVVKVTKDTVI
                     TKEDAERDLARRTAIFANNVRQELGDSHWNALPANAQAVLVSYAYNYGSLAKTKSVLD
                     AARRSAQTGDMTALATAVRNRQVDNNGINARRRNQEADYILGKN"
     gene            15455..15883
                     /locus_tag="PXD69_001529"
     CDS             15455..15883
                     /locus_tag="PXD69_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283723.1"
                     /translation="MRKLLVITALTLCTTPVFAADKNVIFSCTSTEGKPLTVKRVGND
                     YEYSYDKTTFKNPIKKAVTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKE
                     FIEPGATISQSKEQPSIGSVDCDTRKKSHYKFDVHLMNTL"
     gene            16042..16314
                     /locus_tag="PXD69_001530"
     CDS             16042..16314
                     /locus_tag="PXD69_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HDL6283724.1"
                     /translation="MATATARFEARMSQEVHMLLKRAASLEGRSLSDFVVGAALSAAR
                     KTVEQNDIIRLSVNDQELFAKALIDPPEPNLAMQKALALSSQILGE"
     gene            16314..16808
                     /locus_tag="PXD69_001531"
     CDS             16314..16808
                     /locus_tag="PXD69_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6283725.1"
                     /translation="MLSGLKIESFSKEFKRDCFDSESELLNQYLKTQVSQDIKRRITS
                     CFLAVNSEQTVVGYYTLASTSLSLSDLPITLQRKLPRYPTVPAVLLGRLAVDKRVKGL
                     GLGQALLGNALKRVLRADIAAYALIVEAKDESAVNFYRKFGFIDFENEARKLFFPLDR
                     VRLS"
BASE COUNT         5095 a         3346 c         3333 g         5114 t
ORIGIN      
        1 agcaactgtt ttgtccactt ggcatagttt ttgacggatc agcaactatt ttgtctacta
       61 tgcctttttg ttacttccag tattttttct tcgaggtttg cccgatcccc ggattaaagc
      121 tgttggttgg atcaagctgc cggtagaatt tgcgtaaggt cggttttgct tcgtaaagat
      181 gaccgacatt atgctccgca gggtattgtg ccccacgttt atccagtaat tctaacatct
      241 gatgttccaa cgccaaacaa tctacacctt ttttcacaat atagtcttga tggaaaacat
      301 ggcacataaa atgcccataa taaagtttgt gcgtgatttg actctctatt tccggcggta
      361 gcacttcaaa ccacgcttta tcatttcggc gaagggcaat atctaaagca acaatatctt
      421 ccacctcttt atcgtgaatg gctcgatagc gaatcgctgc cgaagcaacg gcaaaacgat
      481 gtaacattgc cgcttggctt tcagtcggat tacactccaa ataaccgcct ttttgtgtat
      541 cagcaaaata acgggcaaga tagtctcttg cttcttgaac gccttttcca cccattttga
      601 taattaagtg atgttcatac tggttacggt agtctcgaag actttccggc aaatgttgcg
      661 gtaacatttt tgagattgcc tgtaatattt tatcactgag atttgccggt aaaaaggtga
      721 gtttcttcgc cattctgtcc acttttgctt taagtgaaaa gagttgtggt aagcggtgtg
      781 taccgagttt tttaatcacc caaaaagtat ctttaccgta atcagcggca atatcaaagg
      841 catcacgatg aatatattca ccggaaatcg gcaatacctc aaagttggct aacatatagc
      901 gacgaatatc gtttaatgtg tccgtatgat ttgtcccgat ataaaaaaca gccgtgtctt
      961 tttcaagcgg aaaggtatct aatcgcaccg caaacaccgc taactttcct gcactaccgg
     1021 cagcctcgta gtggcgggca ggatcggcat taaaacgggc aggggagtct tcatcaattt
     1081 ggcggacgtg attacaatag gcgtgatcgt gtccttttcc gcacgcttgc tgaatatcct
     1141 tacgctgata acgttgggct tgcagatttt ctaaaatttc ttccggcgta tcacctaaat
     1201 caatacctaa atggtttttt aattccagcg tgccgtcttc atttaactgg gcaaacagtg
     1261 ccatttcagt ataagccggc ccacgttgca ctaatgcacc ccctgaatta ttacaaatac
     1321 caccgataac cgaagccccg atacaggacg atccgatcac cgaatgcggt tcacgtccgt
     1381 gcgttttcag caacaattcc agctcattta atgtcgagcc cggtaagcaa acgacttgat
     1441 tggcattgtt aattaactga atgccgttca ttcgcattgt gttaatgatc acaatatccc
     1501 gatcataatc gttgccgctt ggtgttgaac caccggttaa tccggtattg gccgcttgtg
     1561 agataacaat gacatcggcg gcgacacagg cttttaatac gttccagtat tctaataacg
     1621 ttgtaggttt taccactgca atcgcactac ccgtgccaaa gcgatacccg ctacgatagg
     1681 cttccgtctt agtcgggtca gtgatgatat aagactgccc gacaatttca gtaagctgag
     1741 aaatcagtga attatttgac attatgcttc cctcaaaggt agaaatagat agggcagtat
     1801 agcaataaac aaaagagagc aaagcagaat gttacaaaat tgtgaactac tgcacagaat
     1861 aaatgaagaa atgaagtaaa agaaagcgag ctaaaagagc gtcgcccgct ttatttgtag
     1921 aaaatcaaac ctaatctgac agtcccccgt ttaaaattac cgtgtctgtc agattaattt
     1981 gagcttaaat tcttttctgc ccaaatgcgt tttccatcaa ctaatgtctc catcggtgtt
     2041 cttccacagc acatttttcc ttgatgggtt cgatgatggt tataatacat taaccattca
     2101 tctaagtcag cttgcaatgc ctctaaatcc atataaatcc gttttctgaa tgccacttgg
     2161 tagaactcct gcaaaatcgt tttgtgaaaa cgctcacaga tgccgtttgt ttgtggctgt
     2221 ttcactttgg tttttgtgtg ctctatgtca ttgatagcca aataaagctc ataatcgtga
     2281 ttctcaactt tcccacaata ctcactgcct cggtctgtca gcactcgtaa cataggtaac
     2341 ctctggcttt caaagaatgg taatactttg tcatttagca tatcagcagc agtgatagcc
     2401 gtcttcattg tatacagttt tgcaaatgcc actttactat aagtatcaat aaacgtttgc
     2461 tgataaatac gacccacacc tttaatattg ccgacataaa aggtatcttg tgaccctaaa
     2521 tagccggggt gtgccgtttc aatttcacca caggcaatct catcttcttt cttccgctcc
     2581 aaggcttgta tctgtggctc actcagaata atgccttgct ctgccaccaa tttttcgagg
     2641 gcagttaagc gttgcttaaa attagctaag tgatgtctca accaaatgga acgtacacca
     2701 cctgcagaga caaaaaccac ctgcagagac aaaaaccacc tgcagagaca aaaaccacct
     2761 gcagagacaa aaatcccctg tttacgcagt tcattactca ctcgaacttg accaaaagca
     2821 ggattatcta aagcgaattg tacaaccgct ttttctgtgg attcatccac acgattttta
     2881 atgttgggaa cacgtcgatt ttgatttagt aatgcctcaa caccgccttg ttcgacagcc
     2941 tgttgatagc gataaaaagt atctcgactc atccccatta ccttacaggc ttgtgagata
     3001 ttacccagtt cttctgctaa atttaataaa ccggtcttgt gtttaataag tggattgcta
     3061 gaataaaaca tgagagtttc ctttttgttt agattgattt ttgacactca tattctaaac
     3121 gggaaactct cactttttag agtgaattgt cagatcaagt ctgatcttct acagacgatc
     3181 caggtcttac acattctttc aagtttgtaa agcctgaaaa ttatttttta tacttgattt
     3241 ttgtcaaaaa gtctctacac tatatggcag ggtcagtttt cgctgtttaa cggtgtttaa
     3301 tgagattttc attactggct ctccttaata gaaatttatg gaagagctat ctgatagagt
     3361 aatctagcga tagctctttt tcattgaaca aagaggctat atgtatctta tgtatgttga
     3421 tgagtctggt tctacgacag atcctactca aaaatatttt gtattatcag gtatcgctgt
     3481 atttgaacga aatactcatt ggattgagaa aaaaatgaat gtgatagcct ctcaattctg
     3541 tcaatattct gaagggagtg atccatattt ctatgagtta catggttcac caatgagatc
     3601 tggaaagagt gaatggagag gcattccaat gagtgagcgt attaatgcca ttcaagattg
     3661 cttgaaatta gttcaaagta ataatattcg tatatttgca gcagttatag agcaagggta
     3721 ttctagtggt caggatacta ttacagaatg ttttgagcaa atatcatctc gatttgatat
     3781 gtatctgagc cgtttacatg cccaaggtaa tacccaaaga ggcatttcta tctttgataa
     3841 atcatcgact gagaagtcaa tccaagcact tgcaagaaca ttcaaaaata gtgggcatac
     3901 ttatgggaaa cttagaaatt tctcagaagt tccattattt cttgactcaa agtcatcgag
     3961 attaattcag ctagcggatc tagtttccta tgcgatattt agacactatg aacacaatga
     4021 tagctcattt tacgatatta taagaaataa ctttgattat cataacgggc gtattcatgg
     4081 tttatattta cggaacaaag aagatattat ttcataaaaa ttcgccccaa aagggagaag
     4141 tatctccctt ttgtattttt tataacaaat taaccgtttc tctcaacatt tccacatcgt
     4201 gttcaatata tcctagtgtc acactgatat ctttatgccc taacagtttc tgaaccacat
     4261 aaacattttc gggcttcttc attaattgag tagcaactgt atgtcgaaat ctgtgtggtg
     4321 atgaagtaaa accgaccaag tcagaaatat gccgaaatat atgtgtaagc tgattttggc
     4381 tcatcggctg tcctcttctt cgagagcatc gagaaaataa attgagattg aacaattggc
     4441 aattatctgt ttgttttctt atttttaatt cagtaataag cctttctata tgaatataaa
     4501 gtgaatctga aatcggtacg atatggtaat catgattttt attgatttcc ggcgaaatat
     4561 aaatcgtcct attagaaaga tctacatcac taattttcag tttcactaat tgtcctcgcc
     4621 gaatccccgt acatctcaat gtcataataa ttgcaaggac aaaccagctt ggttttagaa
     4681 agtcaggtaa tacaacgtta ttattgagta tgtggtctat tttatgtaat tgttcggttg
     4741 aataagtttt ctttctcctt ttcgattctc gaataaataa ctgattaaat ggatttcgat
     4801 ttatattaag taatccttgc gatataccaa agttatataa ggcttttaaa tgtctgacat
     4861 aattattcca cgttactgct ttgattttat cgccaacaat ttgattacgc cattcaatga
     4921 gcatatcggt ggtaatgtca ttggcattta actttggata acgctttttg ataattcgga
     4981 ttacgttgtt gtagctccgt ttggtatccg gacgaagata gtgacgatag aaaaaaaaat
     5041 cggtctagta gcgaatcaaa agagatagaa gttatcattt taagtttcct ctttctgtaa
     5101 agttaaacag tgattattta atagtacctt atccccaaaa aagagacggg tattttttat
     5161 caaatatcct gttaaagagg aagtctttct cggtccaatg acatcacatt tccaaaaatt
     5221 gatggtatcc ggcttaccgt tggtcattgt gtttttaggt gaatgaatcc ctaatccttg
     5281 aaaatcatac tggagattat taattgtttc cttatcataa ggctgtccag tctcttgcaa
     5341 atacatttca aaaataacgg gggtaactaa aaacaggtgg tcttcaacaa tatggagctt
     5401 ggcagtaggc ttgttaattg caaatttgtt ggtcgcaata cctgatttga gccactttac
     5461 aaagttatct cctgtaattg agttctcctt attctgtaac tgtagctctg atagtgttaa
     5521 tgtttcgggc gtttctactg cactttgtgt tactttgagc tttttagtgg tagatttatc
     5581 ctgtacttct tgtttggatg gcatacttgc aatttcctgt cccttaccaa ttgaaatatc
     5641 atcaaggctt ggttcggaac tttccgtagg tgcaaacata tccagcacaa aggaggttaa
     5701 atcattttca tcatttatga tgatttctga ggatggtgca ttatccgagt ttgtctctac
     5761 ctgagatatt tcaacttctt tagaggcaat aatgccccct gtctgaacac tcggtaatgg
     5821 agctggttta gtggtcccat cgactaatgt agactgagtc tctatattac tttcttctgt
     5881 tatctgctcg actattttaa cttttccggc aaaataattt ggtcgatcat taatattctc
     5941 ccaagccact tctggtttaa ttctcaataa tgtaaaggta tttgctggcg tccaacctga
     6001 atcagcttga atacggcaac tccaaattgc tccaccagcc ggtgattctt ctacaatacc
     6061 gagagactgc atttcatcaa ataactttgg attatcctta ggcactgaaa ttccctgccc
     6121 cagtaagtaa gctcggatat tatcagcagc agttttgcta acaagccaca atccttcctc
     6181 agtgaaccaa ccgtctgccg gacctttggg tgtatttaac tttattttct gttccagcaa
     6241 ataacgtagt gccaagacca gttgctttga cagagaattg acaggacgtt gaaccagttt
     6301 atttacatcg ccaccgagtg cgagggtaac actatgctga tcggctttct gcacgatctc
     6361 agataaaagc ccggctttat cgttatgccc agacattgca tacatcagtg aagaaatgac
     6421 ttctggatac tgtcccagcc aatcaaacgc agattttgga ataagttgat ttgcaaggaa
     6481 gcctcctagc accggatgaa gatggtagtc tcgacctttg atgtatttga atttataagg
     6541 ttgaggtggt aacccattcc aagcaaacca acgtgaaccg tctttgagtg taatttcaat
     6601 atcaacgaca actttgccaa tatcgtgaac taaggcaaga taaattgcag cggcagtcca
     6661 agcgtctcgt tgcttagatt gttcttcagg tgcgacattc ggtggcaata tatagttttg
     6721 acggactttg gctgaaaaag caataacttc caaaccgtga tcgagcattc cgccgatatg
     6781 tgaatgatga tgtgactcgg aagcgggtaa cagttgcacc atttcggcat aacgctctat
     6841 tggctgttga taaagtgcct caaacatttg acggttcatt gatacctgtt gccaaagtag
     6901 acccagatat ttttggcgta attccgtatt aagtagttgg gaggcatttt tcggatataa
     6961 ccagccctca ctatcctgct caatagagaa aacattgtca gatttaaccg aactttgaga
     7021 cgaggattta cttttgccaa gaattttttt gagaattgag tgcattgaaa tagaccgaaa
     7081 aagatgatgt ttgcgttgaa agaaagccgt ttagcccttt gcccttttgg gtaagacctt
     7141 tccccttgga aaggttaccc ttattccccc ttaggggatt acccttgccc gtaagggctc
     7201 ctttatcctt ttgccattga gcggctttta tctgaaccaa atttaattta taaagggaga
     7261 gtattgaacc aaaaaataag agaactcagt aggaaaaact ctctgaatat gttggaggat
     7321 ttttgactaa tgctgttgag ttgagatatt acaatatact gatgatagta atcttatatt
     7381 tgccaccagt acaaaagaaa tacggcacaa aatgtgccgt attttgaaag ttagctattt
     7441 tttagctgtt taaggcgttc atcttgcttt tttagaatat ggcttgtcca tatggccaac
     7501 ccaaatgcaa taaaagcaat aatccaaatg ccgatcatta atcccatttt gatttctcct
     7561 tctcaataaa ttggcgtata tttctaccga taactaaaca gaaataggta gctataaata
     7621 gaccaattat actgcttatc ttaatccaaa actcgtaatt actatacagc atagcaggta
     7681 ctgcaacaaa agctacttta ccaacatcat cacagaattt tgaccaagat tcaagtgtcg
     7741 aaatttcaat gggtcgttta aataagttta gattgagcat tgagtcctct cgttaagtga
     7801 ataaaaaggg agacacaatg ccccgaaggg agagtatctc cccacgggaa atgcctttcg
     7861 gcaaatttat taagcggctt cttcaaatac ttcgtattta tcagccagct gtgcgatgtt
     7921 taaggcatcc agcatatatt gacaggcttc ccgagctttc cctgaagccc tgaaaattgc
     7981 ccgtttatcc tctcttaaca ccttgatcca actttcaatg tagctggcat tttgtggcac
     8041 gtcagcaaag cctaggtgag aacacaagaa tgcacagccc atttcagcga ccaattcttc
     8101 aaaagcataa actttattgc caaagcgagc ttttccggaa acaataccat cacgagcaag
     8161 gcgagattga tgccctgttg cgtgagtcat ttcatgtagc agcacgctat ggaatttttg
     8221 tggtgaatga aactgcttca tttccggcat cacgatatgg tcattgcgtg ggtggtagta
     8281 agcttgattg cttggtttta ccatcacttg caaatccata cctttcaaca tcaaacgaat
     8341 ctcctcaaaa atagcatact gattttcgtc agtcagctgt tctggggttt caaccgtttc
     8401 ataccagtcc tgtggcagtt tttcgcactg ttcaatattg aataggcagt gctttttaat
     8461 cgaagcgaga tgttcgatta ccgggttacc atcgtcatcg aggacaaggt tgccatcatc
     8521 atcggttttt tctcgatcat acgggcgata gctgaccgca agggttgctt tttcaccttt
     8581 ccgaacgtgt ccaccggctt caatagctgc ttttgcagtg atccacttgc gttggatata
     8641 gccgtgttct gcggcagaca accaaagtaa caaaacattg attccggaat acaatcttcc
     8701 ggatatggca ttacacggca taccaccata aggaataacg ctatcccaag gtttaagcca
     8761 aggagccgtt ccttgctcta aagcggcgat gattttatcg gtcacttctt gatataaatc
     8821 aaatttaggc tgtgtgtttg attgagggtt cataagtgtt tctccaaagt tcgggtagaa
     8881 aaatggggaa acactatcgc cctatgggga agtcgtttcc ccgatgggta gtttataaaa
     8941 tttcaacagc gacaattttc cttgtgttat caaaaccgat tgaactgcct atagcgtagt
     9001 aattacgaat agtctgttca tcggcattga ttagggtaaa gaaataatcg ccatcatcgt
     9061 aaataacttt aacagtgcga ggttccatta tctcacctcc attaaagcaa acgttgaaaa
     9121 caatttgcag ctctgaagtt gtaacttttc tcggctgctt cagtttcagt aatcattccc
     9181 tgttccagca aaatacgagc tatgccctca taaaacaggt gcagaaaaat ggaaataaaa
     9241 cctgttgttt caactttggt tggacggcaa tagtattgct tgtcatacca aattttgatg
     9301 tcatctttga gcttttgaga ttccacaact cgatatacaa cgtctgacac gttgattaag
     9361 ttaccgtgaa aattaagcca aatcgtataa cgattccaat ctcctttttt catcggctca
     9421 atgcagatgt gaaacagata ttgatagact ttattttcaa ggttgcggtt atcccaaata
     9481 tatttaagtt gctctaaatt gtgttcattt ttcataacat ttctccaaat taaaaagtgg
     9541 agaaacattt tgcccaatag ggaaaatatt tccccacggg gtgaaaatta accactacaa
     9601 gcggtcaaat taaagtaaaa atctgcaaat taggcgtgca agtaggcaaa acgtgctgca
     9661 ttatggcgag cagaggcaat cgcctcacca ataagctctt gtcgataacc actaaacgaa
     9721 cggtcattcg gcgagtaact tattccactc aagcgagcaa gacctaactg aatttcactt
     9781 ttcttatcgg taacagttgc ttcaaaatca gcataacaga gttgcccttg acaaatctgc
     9841 tctatagctg cttcaaaatc acacatatca ccaaatgccc aatcaacaag ctctgaataa
     9901 aactcagaag gtttacgttt cagttctact agatattttt ccgtattaaa tttgaaaacg
     9961 gtttccgttt gatacggcga ggcttcaata atttgataac cgaccgattc catttcacgg
    10021 gaaatatctt tgatgtactg ctccaaatct tcgataaatc cgtcccacaa tgctttgtat
    10081 ttatccactt ttgaagtagg aaaataccag tttcttcgag catcactatc attgaaaaac
    10141 actaactgat ctgcagtttt agcataaagc tccatcgtat tccaatgcga gtaacgatac
    10201 ccaaagcgat ttcgtataat ttcaaaacca atatcatcgt gggtttccca agattcaatg
    10261 tgcgttagca aattagcaaa cattttctgt ttacgtttct gtggattgag atgattgaaa
    10321 agctggatta gatcatctgt accaagccga ccataaaatg cgactccatc tccttgacaa
    10381 tggctgagtg aatactccat atctaaggta tccggaaaac cagctttgac aagagcgtgt
    10441 ttaaaataag tgtttaatac tgaatctgac ataatgtttc tccaaaataa aaaataatgg
    10501 gaaacactta agcccaattc gggaaagtat ttcccgatag ggtaaaagga aggtaaaacg
    10561 gagaacaagc tcctcgggga acttgttccc ctatgggtta gaatggagtt ttgctattta
    10621 gactgtggct tatctgattt tgtaaacaaa atatctcgat ttgcccaagt tactagaaca
    10681 ataaaaattg ttgccaataa cgctgttcca atagcagcac ctaaaaagta cggactcatt
    10741 tcggttctcc ttgctttgaa ttaagtattt tctcagaatg atgtagtgcg atatgcccga
    10801 taatccaaat atacaatccc cacaaaaaaa gaacaaatcc ttccgatgtg gaaatctgat
    10861 cattggaaat taccattccg acaaaaccag ctcccataag ataaccagct tttctaaaat
    10921 cttctccgat tttagctagt actttgggat tcattttgta aaaaagctta ccaaacattg
    10981 aaccaactat gaacgactga caatgagctt gccgtcttgc tccgatacac tcagaaagcg
    11041 gaaatgcagt ccttgtcggg ctggcatttg ttgcataaat cgcacgcttt gagtgccttt
    11101 atctcgattt tgccaggctt cgagagcttt atggctaatt tcgtgatgta aggctcgatg
    11161 ttccggtgtc cattcattga gtttgattgg caaaatatct ccaacacagg agagtttgat
    11221 atgaactgac atacatttct ccaaaattaa ggggaaatgt attaccacaa gggaaatagc
    11281 atttccccga tgggtgagtt aaattagatt aaagagagct gagtaccaaa aacggtagcc
    11341 ataccacata aaaaggcaat aatcgcaacg aataaagccc tgaaaaacat cttacgctta
    11401 atgcgagaaa tttcctgctc atattcagct gcttgctcat ctaagcacat ttgcaattct
    11461 aaggctcgca tttcatcttc ttcagcaatt cgttgattga tgcctttggt tacctcgaca
    11521 tatttgcttt tagctttatg tttcgccgaa acgaaaatat taccgagctt attgccaagt
    11581 ttccaaaaaa gagaaggttt tgcggttttt gacgattcaa atgggatcac atcccatcct
    11641 gcggtttgtt gactcatagc gagttctcct ataaaaagtt aaataaataa aattcctcag
    11701 gagatcgcaa ttccaaggga attgaaatat ccctcggaag gtaggtgttt aggtggcatt
    11761 cctgcaaatt tgcagcgttc cctttcagaa tgctgggaga cattttgggt aaataactca
    11821 actacctcga tggatagccg ccgcttctca agagttatgc gacttttaag ggctgtttcc
    11881 acagcatctt aatattccat atcatacgaa atccatttat aaaatcaacc attttttgct
    11941 caaaaaaata tctctttttt gaaaagagtt tttcctatcc tctatgtaaa aatctcgcta
    12001 attttctgct tatttattcg gaaagagagt gatgaaagca agtagatttc taggatattt
    12061 cagcatagta acagtagtgt tttctgtagt ggcacaagca cagccgaata tcattgtcta
    12121 tacaacaaag atgtacccca ttcaaaattc acaacttgcc tcccaagttt attatcttga
    12181 tcaagtagag aattttgaag aggaaatcag tcgaaatctc agtaaatccc ccgagattgc
    12241 cgaacgagaa atacgagcat tctttaattc agcagattgg aaagcccaag aagagcaatt
    12301 aaaagatgct tatcaagggg tgatcagtgg atggcaaaat ggaattaaaa aagtgcctgc
    12361 ggtgtttttt aataatctgc aatcctctcc gagcgtgatt tatggtatga ctgatataca
    12421 aaaagcacta gatgaatggc ataaatgggt tcaacaacac ggtgaatcaa aatgaaaaga
    12481 gcgttttttt cggtacttct ctctgtaagt ttagcagtac caacaacctt atatcctcaa
    12541 caggtaaaag catcattgaa tacggcgtcg attgctgcat caagtgcctc aacaagctgt
    12601 ttagactata aagtcgtcgg aacgtgcttc tggttatttt gcacctactt tggatgcaag
    12661 gttcgtacat caaccaaaat taagcattat ttaccggaaa tggtcgtttc atcttataac
    12721 caggatgggc aaactccgtg gacagaatta caatctctca atcctggcgt aaaaggcgga
    12781 gaatatcgtt ctccgcaacg tcaatactct caactaacct tcaaaaatgc agatgctttc
    12841 gggcatcccc aaggagcaat tggtcagtta ttaggaagta caggctacta ttgtaaaagt
    12901 caaaccacac catttatacc ctattttcta agtggattag atttctttgc ttggcgtgaa
    12961 aatatgccgg aaatgtttta tccggaagct ctgattccgg gaatgcggga agttggccgt
    13021 gtaggcgata gctggggaaa tatttaccca cgttccggtt gggtaacaca agctcacgat
    13081 tataaagcct ctgcaaccat tgtgcagaga gttgcagaca tcgtgacccg aactgctcaa
    13141 ccacatattt atttcccggc agcgaaaaaa ggtggtgttg gagaatggcc accaggacct
    13201 gtcgaagaag gacaagccag aacacataaa tggcaaatgc tttatcctca aatgtcaaat
    13261 acctgctctg tttttccaaa tggggggcaa acagacacct attcctctca gatttcaaat
    13321 caaggtgatt atgcttgggc actatggcga ccttatagtt gttgtaaacg ccgagggcaa
    13381 acattccttt acagtattga ttggtcacac taaaacgagg tcttgcaatg aaatcacaat
    13441 ttaaattcaa gaaaacacat ctattagtaa taacagtact tttttccagt acttcctcta
    13501 tctcttttgc tgactcaatc actgataaac tggaatttag taagtcggat tcgattattt
    13561 cagatcgtgt cttttaccaa atcggcggag gaacaggtta tatggctcca cctagtcgtg
    13621 gtaataccaa agtcgttgat ttaggcatcg gttggaaagc gaatttaacc tgtggcaatt
    13681 ttgacattaa aacaactatt aaaaatgatt taaacggcct taaagatggc tttaaagatt
    13741 taatggggaa tgtcattgat tcagctaaag gtgcggttgc cagtatgcct gcaatgatat
    13801 tgcaacgggc caaccctcaa ctctacgatt tgctgacaaa tggtatgtac caaggtaagc
    13861 tggatttcaa ccgtctaaaa acttcctgtg aggaaatgtc taaagttctg gcagatcaca
    13921 cactaggagg aaaatggggg caagcagcag atttagagag ctataagcaa attacctcga
    13981 cacaacctga tgcgaagcaa gcccaaaaag acctagaaga taaaaaaggg aaagatggga
    14041 gagtttgggt tggtgggcaa cgtaaaggtg ggcaaaacca agatccaatt aatgtcgttg
    14101 gtgatgtagc gaaaggcgga tttaatttac tcaataagcg gaatgtctta gatagcagcc
    14161 cggtttcaaa ttgtgaaggt aatctttgtc agacttggga tacacctcaa gctgctgccg
    14221 acttcttaac taagattatt ggtgagcaat caatttcaac ctgtaaggag gattgtggta
    14281 ctaaaaccag ttcgaaagcc ggtgttggtt taagtccgga aattgaagaa gaacatattc
    14341 gtacaattgt taaattagaa aatgtactga atatggatgt gccgaaatcc gagctattag
    14401 ctgaattaag ctcaagtagt gtacctgtca ctcgtggctt gattgaaagc ctccgtgatg
    14461 atccagatgt tgaacttctc agccaacgtt tatccgctga aattgcgacc agtaaagtaa
    14521 tggaaaaaat gctactggct cgccgagcaa tcctagctgg tatgcgagag ccgaatgttg
    14581 ctcaaaatgc ggatgctcaa gtagaactgg aaagagtact caatattatt gaccgtgaaa
    14641 tttcccaagt aaaactggaa atggatatgc aaaaaatgat caccggcaat acggcttcgg
    14701 tgattctgca aagtaaatcc gaacgggaag ctcttgctgg tgctcatagt ttatcccaag
    14761 atagtctgga taagcgtgtt caaggacttg aaaacggtaa tgttgcatta actgatttag
    14821 agacaggctc taatattaac ctctctcgta gaaatattgc attgagtatc ccaaatattc
    14881 cgaatgtagc agctctcatc ccgactctac caaatagagg tggttcaggt gtaggcggaa
    14941 atttcccatc acttgcacaa atcagcggtt caacgatgga tcaggcaaca gggttactgc
    15001 gtaattttga aggctttatc tccaaggctc aatgggatgt gaatgcccat cgtgtaggat
    15061 atggttccga tacgattaca cgggcagacg gtaccgtagt taaagtgacc aaggatactg
    15121 tgattaccaa agaagatgct gaacgtgatt tagctcgcag aactgctatc tttgcgaaca
    15181 atgtgagaca agagttaggt gattcacatt ggaatgcatt accggcgaac gctcaggctg
    15241 ttttggtgtc ttatgcatat aattacggct cactagcgaa aacaaaaagt gtgcttgacg
    15301 cagctagacg atcagctcaa actggtgata tgactgcttt ggcaactgct gtcagaaatc
    15361 gccaggttga taataacggt atcaatgcac gccgccggaa tcaggaagct gattatattc
    15421 ttggtaaaaa ttaaccttat aaggagttac atttatgcgt aaattattag taattactgc
    15481 tcttacactc tgcacgaccc cagtatttgc agcagataaa aacgtaatat tttcctgtac
    15541 cagcacggag ggaaaaccgc ttactgttaa acgggtagga aatgattacg aatattcgta
    15601 tgacaaaaca accttcaaaa atccgattaa aaaggcagtc actaatgacg gctcaattat
    15661 cgccagaggt tcaggtttta caacgtatgc attagagctg gaaaatgatg gattgaagta
    15721 tttggtcggc tttgttcagc caaatggcaa tgcaaaagaa tttattgagc cgggagcaac
    15781 gattagccaa agtaaagaac aaccaagtat cggctctgtt gattgtgata ctcgtaaaaa
    15841 aagccattat aagtttgatg ttcatttgat gaatacttta taatgcctgt atggcactag
    15901 ggccagccca cgttaaaaaa cacaaagatc ggtaggtaaa tcccttaggt ttgaaaatct
    15961 aagggatttt tttattgtca tgcttgattt gtacggtata aatacgtaca attaaaacta
    16021 aataattcaa ggagaaaata tatggcaact gcaaccgcac gatttgaagc tagaatgagc
    16081 caagaagttc atatgctgtt aaaacgagcc gcttctcttg aagggcgtag tcttagtgat
    16141 tttgttgttg gagctgcact atctgcagca agaaaaacag ttgagcaaaa tgatattatt
    16201 cgattatctg tgaatgacca agaacttttt gctaaagcat tgattgatcc tcctgaacct
    16261 aatttggcaa tgcaaaaagc cttggcatta agctcacaga ttctggggga ataatgcttt
    16321 cgggattgaa aatagagtca tttagcaagg aatttaaacg agattgtttt gatagtgaat
    16381 ctgaattatt aaatcaatat ctcaaaactc aggtttcaca agatattaaa agacgtatta
    16441 cttcttgttt tttagctgtt aattctgaac agacagtagt aggatattac acactggctt
    16501 caacaagtct ttcattatct gatttaccaa ttacattaca gaggaaatta ccaagatatc
    16561 ctacggtacc tgccgtccta cttggtcgat tagcagtaga taagcgtgta aagggattag
    16621 ggttagggca agctctatta ggtaatgcac ttaaaagggt acttcgtgca gatatagcag
    16681 cttacgcatt aattgttgag gcaaaagatg aaagtgcggt caatttttat cgtaaatttg
    16741 gatttattga ctttgaaaat gaggctagga aattattttt tccactagat agggtgagat
    16801 tatcttaatg gagagtgatt atgaaaaata attttggtta ttggttaggc aggaaaattc
    16861 gagcttttaa agaatggaat catcccac
//
LOCUS       DANLXO010000057        16755 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.057, whole genome shotgun sequence.
ACCESSION   DANLXO010000057 DANLXO010000000
VERSION     DANLXO010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16755
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.057"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            28..468
                     /gene="nudB"
                     /locus_tag="PXD69_001532"
     CDS             28..468
                     /gene="nudB"
                     /locus_tag="PXD69_001532"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HDL6283726.1"
                     /translation="MNYKNPHSILVVIYAKNTQRVLMLQRKDDPDFWQSVTGSINIGE
                     TPLEAAEREVSEETGLQTFEQKQPLVDCQKQIEFEIFPHFRYKYAPNITHCVEHWFLL
                     PLDSEQEPILTEHLAYRWVSVEDAVRLTKSPNNAQAIQEYLTSK"
     gene            481..1221
                     /locus_tag="PXD69_001533"
     CDS             481..1221
                     /locus_tag="PXD69_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL6283727.1"
                     /translation="MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDTS
                     SNPRLRAAVDKALSSNMTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECL
                     SDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILVANADEDALTEAAIEAGAD
                     DIQPQEDGSFEIYTAWEDLGSVKDGIEAAGFKIENAEVTMIPSTTVELDAETAPKLLD
                     LINRLEDCDDVQNVYHNGEISDEVAALL"
     gene            1351..1878
                     /locus_tag="PXD69_001534"
     CDS             1351..1878
                     /locus_tag="PXD69_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283728.1"
                     /translation="MKLVKFVPALAATLVLAACSNANTQSAPQQAQDAVTKVAEQATQ
                     QVNEIAGNAPRASGAVKVEKATDGAKSIVYRCQSGKRVTANYVFQGEEAKAVNLLVQS
                     GGKTQKIPTLTRDASNQDSTSFKTDKYSWDLDTGFTLSSNGQSGMLTKYGAKTDTIVA
                     KLCDVDKALTSKLNK"
     gene            1945..2523
                     /gene="ruvC"
                     /locus_tag="PXD69_001535"
     CDS             1945..2523
                     /gene="ruvC"
                     /locus_tag="PXD69_001535"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDL6283729.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQNGRQLEYLGSGAIRTTAEDLPTR
                     LKRIYAGVSEIITQFQPNMFAIEQVFMAKNPDSALKLGQARGTAIVAAVNHDLPVFEY
                     AARLVKQTVTGIGSADKVQVQDMVTRMLKLSAKPQADAADALAIAITHAHSIQHSLIV
                     AKQSQQNVSSEKEQILALMKTRYSRGRFRLKG"
     gene            complement(2589..3869)
                     /gene="murA"
                     /locus_tag="PXD69_001536"
     CDS             complement(2589..3869)
                     /gene="murA"
                     /locus_tag="PXD69_001536"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDL6283730.1"
                     /translation="MEKFRVYGPFSLNGTVDISGAKNAALPILFAAILAEKTVTLKNV
                     PDLKDVDTTFKILRQLGVTVEKGSDKGVVHIDASKINNYVAPYELVKTMRASIWALAP
                     LVARFQLGQVSLPGGCTIGARPVDMHISGLEKMGAKIELDEGYVKATSNGRLNGARIY
                     MDKVSVGATLSVMMAGTLAKGTTVIENAAREPEIVDTADFLNAMGAKISGAGTDMITI
                     EGVEHLGGCEHSVVPDRIETGTFLVAAAISGGRITCRNTKADTLDAVIEKLREAGMQV
                     DVTENTITLDSLGRRPKAVNIRTMPHPGFPTDMQAQFTLLNTVAEGTSRITETIFENR
                     FMHIPELIRMGAKAEIEGNIAICYGVEQLKSAEVMATDLRASISLVLAGCIATGETIV
                     DRIYHIDRGYEHIEEKLRQIGARIERFSAPFEGE"
     gene            complement(3979..4239)
                     /locus_tag="PXD69_001537"
     CDS             complement(3979..4239)
                     /locus_tag="PXD69_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL6283731.1"
                     /translation="MNPSQIEEILKQALSDATEVHAQGENAHFGVIVVSDSIASLSKV
                     KQQQAVYAPLAEYFTTNAIHALTIKVFSVEKWKTERLLNMVG"
     gene            complement(4272..4595)
                     /locus_tag="PXD69_001538"
     CDS             complement(4272..4595)
                     /locus_tag="PXD69_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HDL6283732.1"
                     /translation="MPQKTLQWDIQQNNESLFVKLSGELTRNTLLPLWKQRASFLSPT
                     GKQSLYWDLKEITRIDSAGFTLLAELLNHYHKIIPNSLINTPDSVRTLAALYDLDGWF
                     EQFII"
     gene            complement(4607..5242)
                     /gene="mlaC"
                     /locus_tag="PXD69_001539"
     CDS             complement(4607..5242)
                     /gene="mlaC"
                     /locus_tag="PXD69_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDL6283733.1"
                     /translation="MLKNIKKIIVTGLVAVSALFSTTAFAETSPYVLMQQTADKLFGD
                     IKANQAKIKSNPEYLRTIVRNDLMPHVHVKYAGQLVLGKNLSAATDAQKEAFFNAFGQ
                     FVEQSYAQVLTQYQDQSVQIESPKSVDGKSIVSIRVNVSGKGAAQPIKLDFKWRKNSK
                     TGEWQAYDMAAEGVSMVATKQNEWAGVIRQKGIDALIAQVAQSAKQPITLK"
     gene            complement(5288..5812)
                     /gene="mlaD"
                     /locus_tag="PXD69_001540"
     CDS             complement(5288..5812)
                     /gene="mlaD"
                     /locus_tag="PXD69_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HDL6283734.1"
                     /translation="MRQSIKYEFWVGLFVLLGLAALVFLGLRVANVQGFSNEKTYTLY
                     ATFDNIGGLKVRAPIKVGGVVVGRVADISLDNKTYTPKVALAVNESFNQIPDTSSLSI
                     KTSGLLGEQYVALNVGFVIEGETAMMKEGDTFVDTNSAMVLEDLIGQFLYGDKKSDKT
                     EDEKASDSAEPKAE"
     gene            complement(5833..6609)
                     /gene="mlaE"
                     /locus_tag="PXD69_001541"
     CDS             complement(5833..6609)
                     /gene="mlaE"
                     /locus_tag="PXD69_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HDL6283735.1"
                     /translation="MVNFISSIGAVVINFIRTLGRSAFMLWGALIGKPEFRKHTPLLI
                     KQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVV
                     TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAI
                     FTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFN
                     GYDCVPTSEGISQATTRTVVNASLVILGLDFILTAIMFGG"
     gene            complement(6602..7405)
                     /gene="mlaF"
                     /locus_tag="PXD69_001542"
     CDS             complement(6602..7405)
                     /gene="mlaF"
                     /locus_tag="PXD69_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HDL6283736.1"
                     /translation="MTKTENLVEVKNLTFKRGERVIYDNLNLQVQKGKVTAIMGPSGI
                     GKTTLLRLIGGQILPESGEILFDGRDICKANNKELYEIRQRMGMLFQSGALFTDISTF
                     DNVAFPIREHTRLPEELIRKLVLLKLEAVGLRGAANLMPSELSGGMARRAALARAIAL
                     DPDLIMYDEPFTGQDPISMGVIVELIKELNQALNLTSIVVSHDVKEVLSIADYAYIVA
                     DKRVIAEGTPEILQASEDPQVVQFLAGKADGPVRFHYPAKDYTEELFNG"
     gene            7630..9024
                     /locus_tag="PXD69_001543"
     CDS             7630..9024
                     /locus_tag="PXD69_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HDL6283737.1"
                     /translation="MNKTMKKSFLTAFILGSTIAAMPAYAEATLPTAVNGQAVPSLAP
                     MLEKVRPAVVSIAVEGKTKGDSRRSREIPEEFEFFFGPHADLFGNRSSAPRNFRGVGS
                     GAVINAEKGYVITNNHVIDNADKITVKLEDGREFKAKLVGADPLSDVALIQVEDPKNL
                     TEIKFADSDKLQVGDFTVAIGNPFGLGQTVTSGIISALGRSTGQSDEGYENYIQTDAA
                     VNQGNSGGPLINLNGELIGINTAIISPSGGNAGIAFAIPSNMANSLVTQIIEFGEVKR
                     GMLGIKGGELNADLAKEFNISTQQGAFVSEVLPDSAAAKAGFKAGDVITEINGQKIRS
                     FSELRAKVATSGVGKEIELTYLRDGKEAKAKVTLQSDSEAKVTASNLIPALKGADFNN
                     YNAKGIKGVEISNVEKGSIAEMRSLKKGDIIIGVNRHSVENIADLRKILETKPSVVAL
                     NIVRDGANFYVILQ"
     gene            complement(9076..9837)
                     /locus_tag="PXD69_001544"
     CDS             complement(9076..9837)
                     /locus_tag="PXD69_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HDL6283738.1"
                     /translation="MKTREQLSQENYQQAVKFAQHFADDVRQEFEREAEQRYQFERTQ
                     FEQSVLQNNAQNRPLAKIASLSCVAILLLAMTYYGLSGRYQVVQSGLQQHQDFQQQMS
                     DAHGTSKNERYILSLQNQLRENPNNGDLWYELGQAYALSNDFDSALVCYDNAEKLLGK
                     RAAILGAIATARYYDNGQKMTVEIQAIIEQALQLDKNENASLLLLASDSFLNNNFQQA
                     LDNWRKVLDSNNDSINRRAIIQSMEMARQMLNSQQ"
     gene            complement(9824..10276)
                     /gene="nrfF"
                     /locus_tag="PXD69_001545"
     CDS             complement(9824..10276)
                     /gene="nrfF"
                     /locus_tag="PXD69_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HDL6283739.1"
                     /translation="MRNSIISIGFLQKIRKILPLVFGLLLFVGTVQAEMVDTFQFQNE
                     ADRVRAISLARSLRCLQCQNQNLVESNATAAYNMRIEVYEMVNQGKSNEEIIRIMTER
                     FGSFVNYDPPFTPQTWVLWGLPVGLFSLLFLAILWRTRKNKGNKNENA"
     gene            complement(10266..10799)
                     /locus_tag="PXD69_001546"
     CDS             complement(10266..10799)
                     /locus_tag="PXD69_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HDL6283740.1"
                     /translation="MKKILLLIPLLLLVVIVGFLTVPLMNKDALAPTEDWQGKPFPEF
                     VGKNLLDSNAHLNNNSLPKEPYILNVWVSWCTWCIKEFPILLELKQKGVPIVGLTYSD
                     RPNDALNALKNWGNPFSLIIDDYEKGFLIQTLKVSSAPSSYLIDKHGVVRYQQKGYNP
                     DFAQDFLPKLEALRNEK"
     gene            complement(10796..12700)
                     /gene="nrfE"
                     /locus_tag="PXD69_001547"
     CDS             complement(10796..12700)
                     /gene="nrfE"
                     /locus_tag="PXD69_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfE"
                     /protein_id="HDL6283741.1"
                     /translation="MLPELGYFSLLLAAISAIFQVGFALLGEVRKQYHWLALAPLFTY
                     LQAAFTTFSFSTLAYAFLTDDFSVIYVAAHSNSQLPDFFKFAATWGGHEGSMLFWLTA
                     LVIWSAVFCKFSQKIDRLFANRTLAMLGLIALGFLLFILLVSSPFERGFPPPPEGRDL
                     NPMLQDIGLIFHPPLLYLGYVGFAVSFAMIVAALVSGGMDAAIMRWLRPWTMISWGFL
                     TAGIILGAWWAYYELGWGGWWFWDPVENASLMPWLLGTALVHSLIVSQQRGIFYYWTI
                     LLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFGLSFIALALFAFRAN
                     LWQGKVRFNLLSKETAFLLINGLFSVAASVVLLGTFYPMIFTVMNWGSISVGAPYFNS
                     VFTPLALLLMIVMGFAVVLGWKQISNKQILVKLWLLPIAVGLALGLIYASISQREHFA
                     LQPLPTIFISLAIWIILTHLPYSQKMWQIRPLAMRLAHIGFAVCVIGAMMNSYYGDEI
                     GVRLKPNQAAELAGYTFKYEDYHDLIGPNYTAEQAVFSISRDEQLLATVTPERRYYDV
                     RTMTMAEVGLFHHNLDDIYIVMGDKFGNLEYAFRLHYKPYVQALWLGGMMMVMAALLA
                     LFGYRRENKK"
     gene            complement(12970..13917)
                     /gene="nrfD"
                     /locus_tag="PXD69_001548"
     CDS             complement(12970..13917)
                     /gene="nrfD"
                     /locus_tag="PXD69_001548"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HDL6283742.1"
                     /translation="MNEYVPFQTPNLVWDGTIAIYLFLLGISSGAVQLAIAYRNSGVK
                     MEKPSQNWIIRSAAILGTLPTIIGLLLLIFHLTKPWTFWKLMFNYNFTSVMSMGVMLF
                     QLYMAVLVVWIAIMFKDWIVRYLPVVSGLIDFAEAKLLKPIEFILFVLAAVLGAYTGF
                     LLSALVSYPMLNNPVLPALFLASGASSGIAATFLVILLAGKLSGESHEVHFMHKFEVP
                     IMVTELGLIVAFFVGLHFGGADKSLALTHALNGFWGNVFWIGVMLIGIAIPLVANIFG
                     SHRLKHNVKFIILISVFDLIGVLCLRYFILYAGQLTVAS"
     gene            complement(13917..14594)
                     /gene="nrfC"
                     /locus_tag="PXD69_001549"
     CDS             complement(13917..14594)
                     /gene="nrfC"
                     /locus_tag="PXD69_001549"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HDL6283743.1"
                     /translation="MTCTRRDFVSGAGAIAVVASTGLATSITLATEKEQKKIRYAMVH
                     DETACIGCTACMDACRTTNKVPEGVSRLEIIRSEPFGEFPNVQYEFFRQSCQHCTNAP
                     CVSVCPTGASFIDPETGIIDVHSDLCVGCQYCIAVCPYRVRFIHPEKKSADKCNFCRD
                     TNLAEGKQPACVEACPTKALTFGDMNDPSSDIFHKVKNNPVYRTKTALGTEPNLYHIP
                     FGKGEHR"
     gene            complement(14594..15250)
                     /gene="nrfB"
                     /locus_tag="PXD69_001550"
     CDS             complement(14594..15250)
                     /gene="nrfB"
                     /locus_tag="PXD69_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HDL6283744.1"
                     /translation="MKKLISKAGRAVALIQAVVFAGFFAISSANALMPEQPKPLWQSE
                     TADDAKVAQDARRDPNKYCTQCHESANATGKPFHHAGKHFQKDVKSPNNGEPLTCISC
                     HGNISESHRKGAKDVMRFNPHGKASNPSLERSVNEQNQVCFACHTAEKLREKFWAHDT
                     HATKIACTNCHEIHPEKDPMKDIPEKDRIKLCTDCHTKIHSGEFKNPEMKATEAKGTK
                     "
     gene            complement(15269..16744)
                     /gene="nrfA"
                     /locus_tag="PXD69_001551"
     CDS             complement(15269..16744)
                     /gene="nrfA"
                     /locus_tag="PXD69_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HDL6283745.1"
                     /translation="MATISILGCLQTALAEEAKTESLTDKAVKHEKLGVKIESANHLF
                     AEKYPLQYDSWKSTAKSTDRGSALEADPRYVILWAGYAFAKDYNKPRGHFYAVTDVRD
                     ILRTGAPKDENDGPQPMACWTCKGPDVPRLIEEKGERGYFDPKWAKYGAEIVNSIGCA
                     DCHDTTSEEFKQGKPALRVARPHVLRALNTVGWKFEDLDKHGKRPAVCANCHVEYYFK
                     NKTDVTFPWDKGVDVDSIEKYYDEINFTDWTHALSKAPMLKTQHPDFEVWSQGTHGKN
                     GVTCIDCHMPKVKDKDGKVYTDHKIGNPFDQFEATCKTCHEQSKETLEKRVKEYKHEV
                     KEAMIRLEDQLVKAHFEAKAAWEAGATQEEMKEILMAIRHAQWRWDYSAAGHGNHFHA
                     PDVMLRTIATGIDRAADARAKLGVVLAKHGVTTPVAIPDISTKEKAQLAIGLDIPKEQ
                     AAKDEFLKTVVPQWEKEARAKGLLPAEEADKPVAAPKAEAK"
BASE COUNT         5006 a         3721 c         3327 g         4701 t
ORIGIN      
        1 aattaaattt cacatcttag taataaaatg aactataaaa atcctcatag tatccttgtg
       61 gtgatttatg ctaaaaatac ccaacgagta ttgatgctac aacgcaagga cgatcctgat
      121 ttttggcaat cggtgaccgg ttcgatcaat attggagaaa caccgctgga agcagcagaa
      181 cgggaagtga gcgaagaaac cggtttgcaa acttttgagc aaaaacaacc gcttgttgat
      241 tgccaaaagc agatagaatt tgaaattttc ccgcattttc ggtataaata cgcacctaat
      301 atcacacatt gtgtcgaaca ttggtttttg ctgccacttg atagtgagca agagcctatt
      361 ttaaccgaac atttggcata tcgttgggtt tcagtggaag atgcggttcg actgactaaa
      421 tctcccaaca atgcccaagc aatacaagaa tatttaacat caaaataagg aaacaacaga
      481 atggcaggcc atagtaagtg ggcaaatatt aaacaccgta aagcggcaca agatgcacaa
      541 cgcggtaaaa tttttactaa attaattcgt gaattggtga ctgccgccaa actcggcggt
      601 ggtgatacct cttccaaccc tcgtttgcgt gcggcggtgg ataaagcgtt atccagcaat
      661 atgacccgtg ataccatcaa ccgtgcaatc gagcgtggtg taggcggtgg cgatgatacc
      721 aatatggaaa ccaaaatcta cgaaggttac ggcccgggtg gtacagcagt gatggtggaa
      781 tgtttaagtg ataacgctaa ccgtacgatt tcccaagttc gtccaagttt cacaaaatgt
      841 ggcggtaacc taggtactga gggttcggta ggttatttat ttagcaaaaa aggcttaatt
      901 ttagtggcaa atgccgatga agatgcctta actgaagctg ctattgaggc cggtgcggac
      961 gatattcaac cacaagaaga tggtagcttt gaaatttata ccgcttggga agatttaggc
     1021 tcagtgaaag acggcattga ggctgcaggc tttaaaattg agaatgcaga agtaacaatg
     1081 attccatcaa ctaccgttga acttgacgca gaaactgcac caaaacttct tgatttaatc
     1141 aaccgccttg aagattgtga tgatgtacaa aacgtttatc acaatggtga aatcagtgac
     1201 gaagtcgctg cattactgta ataaaaaaat cacgcaaaat aagcataatt taggttatgc
     1261 ttatttttta tgaacttttt tcctatatta ctgactaacc taatgtagtt tatatgctac
     1321 tactttacta taacatttta aggagagtct atgaaattag tgaaatttgt ccctgcccta
     1381 gcagcaactt tagtattagc cgcttgctct aatgcaaaca cacaatctgc tcctcagcaa
     1441 gctcaggacg ctgtgactaa agtggctgaa caagcaacac agcaagtgaa tgaaattgca
     1501 ggtaatgcac ctcgtgcaag tggtgcagta aaagtagaaa aagcaactga tggtgcaaaa
     1561 tcaattgtat atcgttgcca aagtggtaaa cgtgtaactg cgaattatgt cttccaagga
     1621 gaagaggcaa aagcagtaaa tctattagtc caaagcggcg gtaaaacaca aaagatccca
     1681 acattaactc gtgatgcctc aaaccaagat tctacttcat tcaaaacgga taaatattct
     1741 tgggatttag acacaggctt taccttatca tctaatggcc agtcaggtat gctaaccaag
     1801 tatggtgcta aaacagatac catcgttgct aaattatgtg atgtagataa agcattaacc
     1861 tcaaaattaa ataaataatc tttcttgatt ttactactca taagcgagaa gataatatct
     1921 tctcgcttat tttattgcac aaagatggct attattttag gaattgaccc cggctcaagg
     1981 gtaacaggtt acggtgtgat tcgccaaaac gggcgacagc tggaatattt aggaagtggg
     2041 gctattcgaa ccacggctga agatctgcct acccgcttaa aacggattta tgcaggcgtg
     2101 agtgaaatca tcactcaatt tcaaccaaat atgttcgcca tagagcaggt atttatggca
     2161 aaaaaccctg attctgcctt aaagctcggg caggctcgag gaacagcgat tgtagcagcg
     2221 gttaatcacg atttacctgt gtttgaatat gccgcccgat tagtcaaaca aaccgttacg
     2281 ggaattggtt ctgctgataa agtacaagtg caagatatgg taacccgtat gcttaaactc
     2341 tccgccaaac cacaagccga tgcggctgat gcattagcca ttgcgattac ccacgctcat
     2401 tcaatccaac attcactgat tgttgctaag caaagccagc agaatgtgag tagtgagaaa
     2461 gagcaaattt tagcactaat gaaaacccgt tatagccggg gaaggtttag gttaaaaggc
     2521 taactcaata taaaatgacc gcttggaact aatgtttcaa gcggtcattt tttgagaaaa
     2581 ttttacaatt actcgccttc aaaaggagct gagaaacgtt caattctcgc cccaatctga
     2641 cgtaattttt cttcgatgtg ttcatagcca cggtctatgt ggtaaattct atccacaatc
     2701 gtttcacccg ttgcaataca gcctgccaac actaagctga tggaagcacg caagtcagtt
     2761 gccattactt ctgctgattt taactgctct acaccatagc aaattgcaat attaccttca
     2821 atttccgctt tggcacccat acgaatcagc tcaggaatat gcataaaacg gttttcaaaa
     2881 atcgtttctg taatacggct tgtgccttct gcaactgtat ttaataaggt aaattgagct
     2941 tgcatatcag ttgggaaacc tgggtgtggc atagtgcgaa tgttcactgc tttcgggcga
     3001 cgacctagag aatcaagcgt gatagtattt tccgtcacat caacctgcat tccagcttca
     3061 cgtaattttt cgatcactgc atcaagagtg tctgctttgg tgttacggca agtaattcga
     3121 ccaccggaaa tagccgctgc cactaaaaat gtaccggttt caatacgatc cggcactacg
     3181 ctgtgttcgc aaccgcctaa atgctcaacc ccttcaatgg taatcatatc ggtacctgca
     3241 ccagaaattt tagctcccat cgcatttaag aaatcggcag tatctacaat ttcaggctca
     3301 cgagcagcat tttcaataac agtagtacct tttgctagag tacctgccat catcaccgat
     3361 aaagttgctc ctacgctcac tttatccata tagattcttg caccgtttaa acgaccgttt
     3421 gaagttgctt tgacatagcc ttcatcaagc tcgattttcg cccccatttt ttcaagaccg
     3481 gaaatgtgca tatctaccgg tcttgccccg atagtacaac cgcccggtaa agaaacttgc
     3541 ccaagttgga accgggcaac taatggagct aacgcccaaa ttgaagcacg cattgttttc
     3601 actaattcgt aaggtgcaac gtaattattg atcttactcg catcaatatg taccacgcct
     3661 ttatcgctac ctttttcaac cgttacccct aattggcgta agattttaaa agtggtgtcc
     3721 acatctttta aatcaggcac attttttaac gtaactgttt tttcagccaa aatagcggca
     3781 aataaaatag ggagtgcggc atttttcgca cctgaaatat cgacagtacc atttaaagaa
     3841 aatggaccat acacacgaaa tttttccatt tgggagatcc taaaaaataa taatttgtag
     3901 gggcgaaaaa tttttcgccc aattttccaa cgtttacaaa agagtttggg cgaatagtga
     3961 ttcgccccta catttcatct atccaaccat atttagcaaa cgctcagttt tccatttttc
     4021 cacgctgaat actttaatgg ttaaagcgtg aatcgcatta gtagtgaaat actcagctaa
     4081 aggggcataa acagcttgct gttgttttac ttttgaaaga gaagcaatgc tgtcacttac
     4141 tacaataacg ccaaagtggg cattctcgcc ttgagcgtgg acttctgttg catcagataa
     4201 tgcttgtttt aaaatttctt caatttgtga tggattcatt ctgacttcct aaaatatgat
     4261 tggtaactca ctcaaataat aaattgctca aaccaaccgt ctaaatcgta taatgcagcc
     4321 aaagttctga cagaatctgg cgtattaatc aaactgtttg gtatgatttt atggtaatga
     4381 ttcagtaatt cagcaagtaa ggtaaaaccg gcagaatcaa tccgagtgat ttcttttaaa
     4441 tcccaatata ggctttgttt ccctgttgga gataaaaaag aagcacgttg cttccataaa
     4501 gggagcaacg tgttacgagt taattcgcct gatagtttca caaaaagact ttcgttattt
     4561 tgctgaatgt cccattgtaa tgttttttga ggcataacta aactacttat tttaaagtga
     4621 taggctgttt tgcagattgt gccacttgtg caattaaggc atcaatccct ttttgacgaa
     4681 tcacacccgc ccattcgttt tgcttggttg caaccatact tactccttca gcggccatat
     4741 cgtatgcttg ccattcacct gttttgctgt ttttacgcca tttaaaatct aatttgatcg
     4801 gctgtgcagc acctttacct gacacgttta cacgaatgct tacgatagat ttaccatcca
     4861 ccgatttcgg gctttcaatt tgcacacttt gatcttgata ctgggttaac acctgagcat
     4921 aagactgctc aacaaattga ccaaaagcat taaagaatgc ctctttttgt gcatcagtcg
     4981 cagccgataa gtttttccct aacactaatt ggcctgcata tttcacgtga acgtgtggca
     5041 ttaaatcgtt acgcacaatg gtacgcaaat attcagggtt tgatttaatt ttcgcttgat
     5101 ttgctttaat atcgccaaat aatttatctg cggtttgttg cattaataca taagggctag
     5161 tttcagcaaa tgcggtggtt gaaaataatg cagaaactgc cactaagcct gttacgataa
     5221 tttttttaat gttttttaac attattgatg ctctccaaaa ctctaaatta gaggttgttg
     5281 tacttaatta ctctgctttt ggttcagcag aatcacttgc tttttcatct tcagttttat
     5341 ctgacttttt atcaccatat aagaactgac cgattaaatc ttctaacacc attgcagaat
     5401 tggtatctac aaaagtatca ccttctttca tcattgcagt ttcaccttcg attacgaagc
     5461 caacatttaa cgcaacgtat tgctcgccta ataagcctga ggttttaatt gagagcgagc
     5521 tggtatcggg aatttgatta aaactttcat ttaccgctaa tgccactttc ggggtgtagg
     5581 ttttgttatc aagtgaaata tcagccactc ggccaactac cacaccgcca actttaatag
     5641 gcgcacgaac ctttagtcca ccaatattat caaaagttgc atacagggtg taagttttct
     5701 catttgagaa gccctgcaca tttgctactc ttaagcctaa aaagacaaga gctgcaagcc
     5761 caagtagtac aaataagcct acccaaaatt catatttaat tgattgacgc attgtctgtt
     5821 cctttcaaaa aatcaaccgc cgaacattat cgcagttaaa ataaaatcca atcctaaaat
     5881 caccagtgaa gcatttacca ccgttcttgt ggtcgcttgg ctgattcctt ctgaagtcgg
     5941 tacgcaatcg tagccgttaa ataaggcaat ccagaccacc gcaaaggcaa aaatcacact
     6001 tttaataaag ccgttaatta aatcgctggt atttaccgag ttttgcatta ccgaccaaaa
     6061 actgccacca tcaacgcctt tccaatctac cccgactaat gagccgcccc aaattccgat
     6121 agcggtaaaa atagcagcta acaccggcat tgaaatcacg cctgcccaaa agcgaggagc
     6181 gatgatacgt ctaagcggat caaccgccat catttcaaga ctggaaagtt gctctgtggc
     6241 tttcatcagc ccgatttctg cggtcaatgc cgaaccggct cgccctgcaa ataataatgc
     6301 agtaactaca ggaccaagtt ctcgtaaaag cgagagtgaa accaaagttc ccaagctact
     6361 ttcggcggca aaatcgacca ataccacata gccttgtaag cctaacacca ttccgataaa
     6421 taagcccgac agcataataa ttaagagcga ttgcactcct aacacataaa gctgtttaat
     6481 cagtaacggg gtatgttttc taaattcagg tttaccgatt aatgctcccc ataacataaa
     6541 agcggaacgc cctaatgtac ggataaaatt aatcaccacc gccccgatag agctaataaa
     6601 attaaccatt aaatagctcc tccgtataat cttttgctgg ataatggaac cgcaccggac
     6661 catcagcttt accggctaag aattgtacca cttgcggatc ttcgcttgcc tgtaaaattt
     6721 ccggtgtacc ttcagcaatc actcgtttat ctgccacaat ataagcataa tcggcaatac
     6781 ttaatacttc tttcacatcg tgagacacca caatggaggt caaattcaat gcctgattta
     6841 actctttaat cagctcgaca atcacaccca tactaatcgg atcttgcccg gtaaacggct
     6901 catcatacat aatcagatcc ggatctaacg caatcgctcg agcaagggcg gcacgtcttg
     6961 ccataccgcc ggaaagttcg gacggcatta aatttgccgc acctcgcaac ccaaccgcct
     7021 cgagcttcaa taacaccaat ttgcgaatta gctcttcggg taaacgggta tgctcccgaa
     7081 tcgggaaagc cacattatcg aaggtagaaa tatcggtaaa taacgccccc gattgaaaca
     7141 acatccccat tcgttggcga atttcataca actctttgtt attggctttg caaatatctc
     7201 tgccatcaaa taaaatttcg cccgattcag gtaaaatctg cccaccgatt agcctcaaca
     7261 gggtggtttt accaatccca gaaggcccca taatggcagt cactttacct ttctgcactt
     7321 gcagattcag gttatcgtaa atcactcgct cccctcgctt gaaggtcaag ttttttactt
     7381 caaccaaatt ttccgttttt gtcatcaaat aggactcaaa ttaataaaag tgatatttat
     7441 ggtctatcaa atttgccaga atgtcaaaaa acttttaata atctgacaaa aatctgcctt
     7501 tacaagcggt cagatttgct aaattttttg caaaccggct gaactgaaaa agaaaggtct
     7561 tgtcttagcc aatacgagcg ttttcactcg tagattataa aaacatagga tatgaggaac
     7621 attcacaata tgaacaaaac aatgaaaaaa tcatttttaa ctgcattcat tttaggctca
     7681 accattgccg caatgccggc gtatgcagaa gcaacattac ccacagccgt aaatgggcaa
     7741 gctgtgccaa gccttgcacc aatgctggaa aaagttcgcc cggcggtggt gagtattgca
     7801 gtagaaggta aaaccaaagg cgatagccgc cgcagtcgtg aaattccgga agaatttgaa
     7861 tttttcttcg gtcctcacgc cgatttattc ggcaaccgct catcagctcc acgcaatttc
     7921 cgtggcgttg gatcaggtgc agtcatcaat gccgaaaaag gttatgtgat taccaataac
     7981 cacgtgatcg acaatgccga taaaattacc gtaaaacttg aagacggacg tgaatttaaa
     8041 gctaaattag ttggtgctga tcccctttca gatgtggcgt taattcaagt tgaagatcca
     8101 aaaaacttaa ctgaaattaa attcgccgat tccgataaat tacaagtggg cgattttaca
     8161 gttgcaatcg gtaacccgtt tggcttagga caaactgtta cttcaggcat catctcggca
     8221 cttggtcgtt caaccggtca atccgatgaa ggctatgaaa actatattca aaccgatgcg
     8281 gcagttaacc aaggtaactc tggcggcccg ttaattaact taaacggcga attaatcgga
     8341 attaacaccg ctattatttc tccaagtggt ggcaatgccg gtatcgcctt tgcgattcca
     8401 agtaatatgg caaacagctt ggtgactcaa attattgagt ttggtgaagt aaaacgtgga
     8461 atgttaggca ttaaaggcgg tgaattgaat gctgaccttg ctaaagagtt caatatttcc
     8521 acccaacaag gggcatttgt aagcgaagtc ttaccggatt ctgctgctgc taaagccggc
     8581 tttaaagcag gtgatgtgat tactgaaatc aacggtcaaa aaatccgtag tttcagcgaa
     8641 ttacgagcaa aagtagctac ttcaggtgta ggtaaagaga ttgaacttac ttacctgcgt
     8701 gacggcaaag aagccaaagc aaaagtgacc ttacaatcgg attctgaagc caaagttact
     8761 gcttcaaacc tcattccggc attaaaaggg gcagatttta acaactacaa tgccaaaggc
     8821 attaaagggg ttgaaatttc taacgtagaa aaaggctcga ttgctgaaat gcgaagcctc
     8881 aaaaaaggcg atattatcat cggcgtgaac cgccactcgg tagaaaacat tgccgattta
     8941 cgcaaaatat tagaaaccaa gccatctgtg gttgcactca atattgtgcg tgacggtgca
     9001 aatttctatg tgattttgca ataaaccttt tgatccactc aaacaaaagc cgatgacaaa
     9061 aatcatcggc ttttgttatt gctgggaatt taacatctgt cgtgccattt ccatactttg
     9121 gataatcgct ctgcggttga tagaatcatt attgctatct aacactttac gccaattatc
     9181 gagagcttgt tgaaaattgt tatttaaaaa gctgtcggag gctagcagga gtaaactggc
     9241 attttcattt ttatccaact gtagggcttg ctcgataatg gcttgaattt caacggtcat
     9301 tttctgcccg ttatcgtaat aacgagcggt ggcaatcgcc cccaaaatag ccgctcgttt
     9361 tccgagtagc ttctcggcat tatcgtagca aaccagtgcc gaatcaaaat cattgcttaa
     9421 cgcataagcc tgccctagtt cgtaccataa atcaccgtta ttcgggtttt ctcgaagctg
     9481 gttttgcaga ctcaaaatat agcgttcatt tttcgatgtg ccgtgtgcat cgctcatctg
     9541 ttgttgaaaa tcttgatgtt gttgcaaacc tgattgcacc acttgataac gtccggaaag
     9601 cccatagtaa gtcattgcta acaacaaaat cgccacgcaa ctcaggcttg cgattttagc
     9661 aagcggtcga ttttgagcat tattttgcaa aacgctctgt tcaaattgcg ttcgttcaaa
     9721 ttggtaacgt tgctctgcct cacgctcaaa ctcttgtctg acgtcatctg caaaatgttg
     9781 ggcaaattta accgcttgtt ggtagttttc ttggcttaat tgctcacgcg ttttcatttt
     9841 tgttgccttt atttttgcga gttcgccaca aaatagctag aaataacagg ctaaacaagc
     9901 caaccggcaa gccccataat acccatgtct gtggcgtgaa tggtggatcg taattcacaa
     9961 aactgccgaa acgctcggtc ataatgcgga taatttcctc attacttttc ccttgattca
    10021 ccatttcata cacttcaatt cgcatattgt aagccgccgt cgcattggat tcgaccaaat
    10081 tttggttctg acattgcaaa catcgcaacg aacgagccag tgaaatcgcc cgtacccgat
    10141 ccgcctcatt ttgaaattga aaggtgtcca ccatttcagc ttgaaccgtg ccgacaaata
    10201 gcaacaagcc aaatacaagc ggtaatattt tgcggatttt ttgcaaaaag ccgatggaaa
    10261 ttatgctatt tctcatttct gagagcctct aatttgggta ggaaatcctg tgcaaaatca
    10321 gggttgtaac ccttttgttg gtaacgcact acaccgtgtt tatcaatcaa ataactggaa
    10381 ggtgcagaag agactttcag ggtttggatc aaaaagcctt tttcgtaatc atcaataatt
    10441 aaactaaacg gatttcccca gtttttcaat gcgttgaggg catcatttgg gcggtcgcta
    10501 taagttaagc cgacaatcgg cacgcctttt tgttttagtt ccaacaaaat cgggaactct
    10561 ttaatgcacc aagtacacca gctcacccac acattgagaa tataaggctc tttcggcaag
    10621 ctgttgttat ttaaatgcgc gttactatca agtaagttct tgcctacaaa ctctggaaac
    10681 ggcttgccct gccaatcttc agtgggagca agggcatctt tattcattaa cggcacagtc
    10741 aaaaagccaa caataactac aagtaacagg agcggaataa gtaacaggat ttttttcatt
    10801 ttttgttttc tctacgataa ccgaataatg ccaacagggc ggccattacc atcatcatac
    10861 cacctaacca taaggcttgc acataaggct tatagtgcaa acggaaggca tattctaaat
    10921 tgccgaactt atcccccatc acaatataaa tatcgtctaa attgtggtgg aaaagcccta
    10981 cttctgccat tgtcatcgtt cttacatcat aatagcgtct ttccggtgtg acggttgcca
    11041 gcaactgttc atctcggctg atagaaaaaa cggcttgctc ggcggtgtag ttcggaccga
    11101 tgagatcgtg ataatcttca tatttaaagg tataaccggc aagttccgct gcttgattcg
    11161 gctttaaccg cacgccgatt tcatcgccgt aataactgtt catcattgcc ccaatcacgc
    11221 aaaccgcaaa gccgatatgg gctaaccgca tcgcaagcgg tcgaatttgc cacatttttt
    11281 gcgaataggg caaatgagtg agaataatcc agatcgcaag gctgataaat atggtgggta
    11341 acggctgcaa agcaaaatgc tctctttgcg agatggaggc ataaatcaac cctaacgcta
    11401 aaccgactgc aatcggcagc aaccaaagtt ttaccaatat ctgcttattt gaaatctgtt
    11461 tccagcccag caccaccgca aagcccatta ctatcattaa cagtaacgct agtggcgtga
    11521 atacgctatt gaaatagggg gcccccactg aaatcgatcc ccaattcatc actgtgaaga
    11581 tcatcgggta gaaagtcccc agcaatacca cagaagcagc cacactaaat aagccgttaa
    11641 tcaataaaaa tgccgtttct ttagaaagta agttgaaacg cactttgcct tgccagagat
    11701 tcgctcggaa tgcaaacaga gcaagggcaa tgaaacttaa gccgaagaat aagatcagca
    11761 gtgccattcc tctgtcggga tcgaccgcaa aggcatgaac cgaggtcagt acacccgaac
    11821 gaacaataaa cgtgcctaat aggcttaaag caaaggcgaa aatggcaagt agaatcgtcc
    11881 aataatagaa aatgccacgc tgttggctca caattaaact atgcaccaat gcggtgccaa
    11941 gtagccaagg cattagggag gcattttcca ccggatccca aaaccaccag ccaccccagc
    12001 cgagttcgta atatgcccac cacgccccta aaataatgcc ggcggtgaga aatccccacg
    12061 aaatcatcgt ccacggacga agccaacgca taatcgcagc gtccattccg cctgaaacga
    12121 gggcggcgac aatcattgca aagctcaccg caaagccgac atagcccaag tagagcaaag
    12181 gcgggtgaaa gatgagccca atatcttgca acattgggtt gagatctcgc ccttcaggtg
    12241 gtggtggaaa gccacgttca aatgggctgg aaaccaatag aatgaaaagt agaaaaccta
    12301 gtgcaattag ccctaacatc gctaaggttc ggttggcaaa caagcggtca attttttgcg
    12361 aaaatttgca aaataccgca gaccaaatca caagagcggt gagccaaaac agcattgagc
    12421 cttcgtgtcc gccccaagtg gcggcaaatt taaaaaaatc ggggagctgg ctgttggaat
    12481 gagcggcaac gtagataacc gaaaaatcat cggttagaaa agcataagct aaggtagaaa
    12541 aggaaaatgt ggtaaaagca gcttgcaaat aagtgaaaag cggagccaat gccagccaat
    12601 gatattgctt gcgaacttcg cctagaagtg caaaaccaac ttgaaaaatg gcactaattg
    12661 cagccaataa aagtgaaaaa tagccgagtt ccggtagcat aaaaaatcca aaaaatgacc
    12721 gcttgtgaat gtaaaaaaag ccctctccac ttgtgggaga gggacagatt tttcttcgtt
    12781 cagaagaaaa atcagggaga ggggaattaa ataattttgc taaaaataac aatactccct
    12841 ctctctgaaa aatatttctg aacgaaatat ttttcggtct caatactcgc tacgctcgct
    12901 ccttcggagc cgttggcaaa gccaacgttc aaatgtaaac atttgtccca caaggggaga
    12961 gagtatatcc taacttgcaa ccgttagttg ccctgcataa aggataaagt aacgcaagca
    13021 gagtacaccg attaagtcga aaacggaaat taagataata aatttcacgt tatgtttcaa
    13081 gcggtggcta ccaaaaatat tggcaacaag cggaatcgca ataccgatta acattacgcc
    13141 tatccagaac acattccccc agaagccgtt aagtgcatgg gttaaagcga gcgatttatc
    13201 tgctccaccg aagtgtaagc ccacaaagaa cgctacaatt aagcctaatt cggttaccat
    13261 aatcggcact tcaaatttgt gcataaagtg gacttcgtgg ctttcaccgg ataacttgcc
    13321 tgcgagtaaa atcactagga aagttgctgc aatacctgac gatgcccctg atgccaagaa
    13381 caatgccggt aacacagggt tattcagcat tggataactc actaacgccg agagtaagaa
    13441 accggtgtaa gcaccaagta cagcagccaa tacgaataag ataaattcaa ttggttttaa
    13501 cagcttcgct tcggcaaaat cgatcaaacc agagaccaca ggtagatacc gaacaatcca
    13561 atctttaaac attatggcga tccaaaccac caatactgcc atataaagtt ggaataacat
    13621 tacccccatc gacattactg aggtaaagtt atagttgaac attaatttcc agaatgtcca
    13681 aggtttggtt aagtggaaaa tcagtaacag taagccgata atggttggta atgtgccaag
    13741 aatagccgca ctacgaataa tccagttttg gcttggtttt tccattttga caccgctatt
    13801 acggtaagca atcgctaact gaaccgcacc tgatgaaata ccaagtagga ataagtaaat
    13861 agcgatagtg ccatcccaaa caaggtttgg ggtttggaaa ggtacatatt cattcattat
    13921 ctatgttctc ctttaccaaa tggaatgtga tataaattcg gctccgtgcc taatgccgtt
    13981 ttggtgcgat aaaccggatt atttttcact ttatggaaaa tatcgctact tggatcattc
    14041 atatcaccaa aggttaaagc tttagtcgga caagcctcta cacaagcagg ctgtttgcct
    14101 tctgcaagat tggtatctcg gcaaaagtta catttatccg ccgatttttt ctcagggtga
    14161 ataaaacgta cacgatacgg gcaaaccgca atacagtatt ggcaaccgac acacaaatct
    14221 gagtgtacat caataatccc ggtttcagga tcgataaatg aagcaccggt cgggcaaaca
    14281 ctcacacaag gtgcattggt acagtgttgg caagattggc ggaaaaactc atattgtacg
    14341 ttcggaaact caccgaaagg ctcactacgg ataatttcta aacgagaaac cccttccggc
    14401 actttgttgg tggtgcgaca agcgtccata caagccgtac agccgataca ggcagtttca
    14461 tcatgaacca tcgcatagcg gattttcttt tgttctttct cagtagcaag agttatggag
    14521 gtggcaagcc ctgtacttgc cacaactgcg atagcacctg cccctgagac gaaatctcta
    14581 cgggtgcaag tcattatttt gttccttttg cttctgtggc tttcatttca ggatttttaa
    14641 attcgcctga atgaattttg gtatgacaat ccgtacaaag tttaatgcga tctttttcag
    14701 gaatgtcttt catcggatct ttttccgggt gaatttcatg acagttggta caagcaattt
    14761 tagttgcgtg cgtgtcgtga gcccagaatt tttcacgcaa tttctctgcc gtatggcaag
    14821 caaaacagac ttgattttgc tcatttaccg aacgttcaag tgatgggtta cttgctttac
    14881 cgtgtgggtt aaaacgcatt acgtcttttg cccctttgcg gtggctttca gaaatattac
    14941 cgtggcaact tatacaagtg agtggctctc cattattcgg gcttttcaca tctttttgga
    15001 aatgtttgcc tgcgtgatgg aaaggcttac ctgttgcgtt tgccgattcg tgacattgag
    15061 tacaatattt atttggatca cggcgtgcat cttgagctac ttttgcatca tcagccgttt
    15121 ctgattgcca aagaggtttt ggctgctcag gcattaacgc attcgcactg gaaattgcaa
    15181 aaaaacctgc aaatacgacc gcttgtatga gggcgactgc tcgtcctgct tttgagatta
    15241 attttttcat agttcacctc aagctacatt attttgcttc tgcttttggt gctgctaccg
    15301 gtttgtctgc ttcttctgcg ggtaataaac ctttagcacg agcttctttt tcccattgag
    15361 gaaccacagt ttttaagaac tcatcttttg ctgcttgctc tttaggaata tctaaaccaa
    15421 tagcaagttg tgctttctct ttagttgaga tgtccggaat cgccactggc gttgttacac
    15481 cgtgtttcgc taacactaca cctaatttag cacgggcatc tgctgcacgg tcgatacctg
    15541 ttgcgatggt acgtaacatt acatcaggtg cgtggaagtg gttaccgtga cctgccgcag
    15601 agtaatccca acgccattga gcgtgacgaa ttgccattaa gatctctttc atctcttctt
    15661 gagttgctcc agcttcccaa gcagctttcg cttcaaagtg agctttcact aattgatctt
    15721 ctaagcgaat cattgcctct tttacttcgt gtttatactc ttttacacgt ttttccaatg
    15781 tttctttgct ttgttcatga caagttttac aagtcgcttc aaattggtca aacggattac
    15841 cgattttgtg gtcagtataa actttgccgt ctttgtcttt cacttttggc atatggcaat
    15901 caatacaggt tacaccattt ttcccatgtg taccttgtga ccaaacttca aaatctgggt
    15961 gctgcgtttt tagcatcgga gctttcgata aagcatgagt ccagtctgta aaattgattt
    16021 catcgtagta tttttcaatg ctatctacat ctacaccttt atcccaaggg aaagttacat
    16081 ctgttttatt tttgaaatag tactccacat ggcagttagc gcacacagca gggcgtttac
    16141 catgtttatc taaatcctca aacttccaac caaccgtatt caatgcacgt aatacgtgag
    16201 gacgtgcaac acgtagtgca ggtttacctt gtttaaactc ttctgatgtc gtgtcatggc
    16261 agtctgcaca acctattgag tttacaattt cagcaccata tttcgcccat ttaggatcaa
    16321 aatatcctcg ctcacctttc tcctcaatta agcgtggaac atcagggcct ttacatgtcc
    16381 aacaagccat aggttgtgga ccatcatttt catctttagg cgcgccggtg cgcaaaatat
    16441 cacgcacatc ggtaactgca taaaagtgac ctcgtggttt attataatct ttcgcaaaag
    16501 catagcctgc ccacaaaata acataacgag ggtcagcctc taacgcactt cctcgatctg
    16561 tggattttgc agttgacttc caagaatcgt attgtagcgg atatttttct gcaaataggt
    16621 ggtttgcaga ctcaattttc acgcctaatt tttcatgctt aactgcttta tctgttaatg
    16681 attcagtttt cgcctcttca gctaaagcag tttgtaaaca ccccaatatt gaaattgttg
    16741 ccacagctag gcttt
//
LOCUS       DANLXO010000058        16647 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.058, whole genome shotgun sequence.
ACCESSION   DANLXO010000058 DANLXO010000000
VERSION     DANLXO010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16647
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.058"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..895)
                     /locus_tag="PXD69_001552"
     CDS             complement(<1..895)
                     /locus_tag="PXD69_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283746.1"
                     /translation="MSKIEFEKIPNSIRKPSVLTEYNNKDAVTTLPTNEQEVLIVAPM
                     LNGEAAFTAPQKIFSDVEAENLFGKGSVAHLMVRQAIQNNPLIRLTVVGLKDHEAGIA
                     ATGQVSFTGTVTYAGVVRITIAGTAYEVAAAKGEEAQAIVARLVNVINAASYSPVVAS
                     VESETTLKLTSKAKGEISNEITLATRNTATGLTLEARAFDNGQRNALIAPALASVAGT
                     HYNVIISPFSDDENALALRSHLESVSAPIEDKPAIGVMGWRGTYATGTTLTASLNSER
                     IIVGWYKGATESNAMIAAGLGA"
     gene            complement(895..1074)
                     /locus_tag="PXD69_001553"
     CDS             complement(895..1074)
                     /locus_tag="PXD69_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HDL6283747.1"
                     /translation="MLKVKAAKGVRVPVENRPHHYIEQEAVEVENTLYYQRRIADGDL
                     IVVKETKSAKETGGK"
     gene            complement(1075..1716)
                     /locus_tag="PXD69_001554"
     CDS             complement(1075..1716)
                     /locus_tag="PXD69_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HDL6283748.1"
                     /translation="MISKIERALIERLTLGLGKMVYAVAGYAGEINDEKLDVLRLPAC
                     LVSYGGSAFEAKSMGVRGKRYQATDVFVVLVITRSMRNQTAGRLGGVTSREVGVNQLL
                     GAVKTLLINQTLDGLVHPIQPKRIRTIWNNAEVKKEKLSAYAIEFEISYNECNVLDDG
                     RFPEGVEPNEQVFKQYQGKLDEPQGDLSGFNNRIFDPNNNAETAFRTEFKDGD"
     gene            complement(1713..2138)
                     /locus_tag="PXD69_001555"
     CDS             complement(1713..2138)
                     /locus_tag="PXD69_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL6283749.1"
                     /translation="MYALVDDFVLRIGEQESIELTDREMVGVVDEATLEVALADSSSQ
                     IDGYLSGRYRLPLKTVPQNLKRICCDLARYHLTSKSLVTMTEEVENRYKLCLKELENI
                     SKGVVSLAVDETNEEESATGENTVQFFNGGNRIWGRDKR"
     gene            complement(2138..2479)
                     /locus_tag="PXD69_001556"
     CDS             complement(2138..2479)
                     /locus_tag="PXD69_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283750.1"
                     /translation="MAKPKKNDNEALNTNENTPLEDKVNEQPEDKTDEQPKPPESETK
                     PDDGALINPIAFEVKLKSIHPQATYGRCGYRFNKETAVEIARKALSDEQIITLANDPY
                     LEFVPVVEGDA"
     gene            complement(2527..3444)
                     /locus_tag="PXD69_001557"
     CDS             complement(2527..3444)
                     /locus_tag="PXD69_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HDL6283751.1"
                     /translation="MFKKSELLKALDTAFRKEFSAGLKVLEPQWGTVAMKVSSSTATN
                     TYAWLGQFPKMQEWVGDRQIKNMQAQGMTIENKLFESTVAVPRTAIEDDQVGLFTPMV
                     KQAAQSAAELPDDLVFSLLKKGKTTLCYDGQNFFDTDHPVYQNVDGTGTSKTQSNITT
                     GSASGKPAFYVLDDSQAIKPLIWQERTTPEIETKFDPSESDHVFMKDQYLWGVRARGN
                     AGFGFWQLIHRVEDSELNSETLEKVLTAMRTLKGDGDKQLNIRPTTLLVPPSLEFAAR
                     KLLEAELIDGTTNTLKGVLKVVVNPFIAE"
     gene            complement(3444..4514)
                     /locus_tag="PXD69_001558"
     CDS             complement(3444..4514)
                     /locus_tag="PXD69_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HDL6283752.1"
                     /translation="MFKHKFKLNPIALSFKLNQEANGRIQLFPFGWFEAQDGRGGRWY
                     VGDENGYALADDINNTAIDLMIDYEHQTLYIAENGKGNPAAGWITKAEYISGEGLFAD
                     VKWTPQATQEIKDGVYRYLSPLFLTDGSGMVIKVLNAALTNRPALHNLQEVVAMSSQF
                     AKFLTPEEENPKMKELLIKLFALSANATDEQITEKLTALEKAKGDSPVALSDVYTELA
                     KEKSQVVALSAKVNHPDPAKFVALSDLQAVQTELNGLKQQINDKERDALIQTALSDGR
                     LLPAQKAWAEKLGKQDLVALSDFLKTVTPNPALASTQSGGEDPNKGTEKVALSAAEIA
                     AAKSLGLSEAAYIEKYKTEESK"
     gene            complement(4773..5189)
                     /locus_tag="PXD69_001559"
     CDS             complement(4773..5189)
                     /locus_tag="PXD69_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL6283753.1"
                     /translation="MIEIQIHGIDEIIATLNRIAAKTANKTDLMRNIAGKMESAVLTN
                     FDEGGRPKWLGIKHRQGTPLVDTENLMGSITADYNNDSAIVGTNEPYAAIHQFGGMAG
                     RGRKVKIEARPFLQLTSQDRQDILDDVQAYWQKLLD"
     gene            complement(5340..6639)
                     /locus_tag="PXD69_001560"
                     /pseudo
     CDS             complement(5340..6639)
                     /locus_tag="PXD69_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248654.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            complement(6626..8251)
                     /locus_tag="PXD69_001561"
     CDS             complement(6626..8251)
                     /locus_tag="PXD69_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HDL6283754.1"
                     /translation="MSKKKHNKQIKPNLNPIKNQELQTDLAEITATGRVLSDHPSNFI
                     TPAKMKAIFEDTENGDITAQHELFMDIEERDSSIFANIQTRKRAALGVDWAIVAPRNA
                     TPQEEKLRDEVDELFYQLGNLEDLVMDCMDAVGHGFAALEIEWAFNGKLWYPNAFIHR
                     PQSWFKWDKHDNLLLKTRQNTEGEPLREFGWVVHTHKSRSTQAARNNLFRSLAWLYMF
                     KHYSIHDFAEFLELYGMPIRIGKYGAGATPNEKQTLKRALAEIGHNAAGIMPESMSIE
                     LHNAANAGGAAGNNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRR
                     DLLVSDVKQLGQTFTQQIILPFLQINFGNIDPTRIPSFEFDTKEPADLALFAESLPKL
                     VDIGMPIPVQWAMDKLGIPEAQENEAVLGRSAPPQAVGLSANFPQKMTACECGCGGKV
                     HALSAQTKTGIKEQDALDDLADEAFSVPDFNAQFDPITKKAVAVVMACSSYDEAAEKL
                     AAAYPDLVSEEHDRYLANALFLADLLGAANAES"
     gene            complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXD69_001562"
     CDS             complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXD69_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL6283755.1"
                     /translation="MKIKEFEKELEELRRQLQQNIEASFEGWDDKPQAISERRQKVLD
                     PVHGFEYFVQAYFPHYVRSEHKSQLHHYLFENLPLSVSDLSKSVRQAIAAPRGEAKST
                     ICTQLFPLWCLVRDLKRYIIIAMDTKEQAYSMLEAIKVEIESNPRLRIDFPEVAQGKV
                     WRAGVIMTAKKQKVEAVGAGQKLRGRRHGAYRPDLVVLDDIENDESVETPAQRNKLHN
                     WVLKAVLKLGAAGEKFDVIYVGTILHYDSVLSRILNTKGWRRVRFKAILRFPGNMALW
                     DEWENIYLSEEGDDDTMSDLFYQQHKAEMDKGALVSWLARPILYLMKIRASDGHSAFD
                     SEYQNDPVSGDDAIFANSIQYWTELPDDLIYFGALDPSMGKAGASRDPSAILVGGYHR
                     ESGKLYVVEAQIKKRLPDLIIEDVIRLHSQYNCHRWFVETVQFQEFLQTELVKRSAQR
                     GKPVPATATKPNSDKMLRIESLQPHIANGLILLHRSQSTLESQLRHFPKADHDDGPDA
                     LEMLWRNALSSSAPIEWESVDDFDGEYRSKWRH"
     gene            complement(9949..10095)
                     /locus_tag="PXD69_001563"
     CDS             complement(9949..10095)
                     /locus_tag="PXD69_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283756.1"
                     /translation="MAKKKQTVVHKHYSFRWIVQLACIFGAIKLMLNGTDGWGWLLLI
                     AACM"
     gene            complement(10095..10595)
                     /locus_tag="PXD69_001564"
     CDS             complement(10095..10595)
                     /locus_tag="PXD69_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HDL6283757.1"
                     /translation="MAHDVEVQKAVRQAYVFDRLSLEMAAERAGVSFGTARRWKAAAE
                     KNGDNWEKARDVQAMASGGIENIAQGLLAGFLIKYRTLMTELEENTEMPTAAKVEALA
                     ALADSFAKMTASSKKLLPETSAMATAMRAIEMMANIVKTKKPHLLPDFLEMLDELEVQ
                     FKKEFK"
     gene            complement(10603..10857)
                     /locus_tag="PXD69_001565"
     CDS             complement(10603..10857)
                     /locus_tag="PXD69_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283758.1"
                     /translation="MSRKKQKQTDSEKLDLILGGLNELNDKVDKQNEEIERLHREIQA
                     TNRLVNEMARKNRRDAVVAGGLGGGIVAVGFELLRLKFGM"
     gene            complement(10857..11114)
                     /locus_tag="PXD69_001566"
     CDS             complement(10857..11114)
                     /locus_tag="PXD69_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283759.1"
                     /translation="MIDEKLFQMLISFVVAPLVAFVGKVIFDRINRNEQTVKELKAEM
                     ESKYQSKELAHEVNRGIKEKLDDILDSLKEVNQKLDKKADK"
     gene            complement(11107..11262)
                     /locus_tag="PXD69_001567"
     CDS             complement(11107..11262)
                     /locus_tag="PXD69_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283760.1"
                     /translation="MKLIKKLRQRWQQWRFYRRRPDLAELHNVVRAAVAQGNQHPVGR
                     AKRGRYD"
     gene            complement(11277..11636)
                     /locus_tag="PXD69_001568"
     CDS             complement(11277..11636)
                     /locus_tag="PXD69_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL6283761.1"
                     /translation="MITQQIAGVVGVVSTILAYAFYKSWQLKQERKLTATLKAEKQQQ
                     AVEIQQKNAEVKNAKIQQKHVSETRRIQPSAIDEQLHQHGYFRDDNGLHGVRSDLPEP
                     CGHNGNETPSACTQSDL"
     gene            complement(11633..11878)
                     /locus_tag="PXD69_001569"
     CDS             complement(11633..11878)
                     /locus_tag="PXD69_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL6283762.1"
                     /translation="MKQFLLDLITNKDGTASTTGFIQFMSWLVLSGILIHAYLYDKPF
                     ISDWWFAYAGICVLGSPATKGVVSALKQKERSREAEE"
     gene            complement(11881..12414)
                     /locus_tag="PXD69_001570"
     CDS             complement(11881..12414)
                     /locus_tag="PXD69_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL6283763.1"
                     /translation="MTEPIKNKATIADFNLAFDRLIGHEGGYVNDPKDPGGETNWGIT
                     IHTARANGYTGSMRAMSRADAKTIYLKAFWQRYNCEQFPPELAFQFLDACVNHGSGNA
                     SRMLQRAVGVADDGIIGKVTLAAIERYSVADVGLLFQAERLEFYTKLKHFDRFGRGWI
                     NRMAGNLRYFAKDTVEE"
     gene            complement(12500..12925)
                     /locus_tag="PXD69_001571"
     CDS             complement(12500..12925)
                     /locus_tag="PXD69_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HDL6283764.1"
                     /translation="MSEFESVEHYLPETVKEIVGVIGLPATEKLIKAFGGFSFQFSNG
                     KLYFNKLKEVLGQDDAVKLQAYMGACEVYLPRCETALRMLRNQQIYADYCQLTEQGGL
                     SGRLAIMQICPKYSVCDRVAWEAVRYYQRKHTVSQATLF"
     gene            complement(12996..13211)
                     /locus_tag="PXD69_001572"
     CDS             complement(12996..13211)
                     /locus_tag="PXD69_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6283765.1"
                     /translation="MIENPEFGYTPSNLKMLRKHHNLTQTEVANILGVGQRIVMRWET
                     ELSSTAARSDMPYTKWAELLKNLQKNF"
     gene            complement(13230..13622)
                     /locus_tag="PXD69_001573"
     CDS             complement(13230..13622)
                     /locus_tag="PXD69_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283766.1"
                     /translation="MTDYQKLLNALLNDADEDCFAVYGLRATTDVHQVGDELGNSFVW
                     VDGEKTDEELDGICTMGIQNADEAGLLNAIKNLGRDACKKFDVEFKGFQSYCGQNFIL
                     VKGDSARGGEDKGESIIRNPIVVAVFNS"
     gene            complement(13748..14095)
                     /locus_tag="PXD69_001574"
     CDS             complement(13748..14095)
                     /locus_tag="PXD69_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283767.1"
                     /translation="MKELLLTTLCLLSLPAIAMTEKAEQETANALVSGDYQQLRNVAY
                     GMETGSFGHDHNPIAACALRRVILLVNSDKVDMTDFNNEAIACRKIEVTDNQQAWETA
                     FTIAKSISATKKK"
     gene            complement(14184..14609)
                     /locus_tag="PXD69_001575"
     CDS             complement(14184..14609)
                     /locus_tag="PXD69_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein GemA"
                     /protein_id="HDL6283768.1"
                     /translation="MQPQTRKQMIQKIHIGKNELKLDDNAYKMLLLEAVDKPSCSMMT
                     DSELMTVLQTMKAKGFVVKSKKYGKRPTASKTAPHRQGLINKIGALLYQSQKPWDYAH
                     AIAKRSFGIERVQWLTDDQLHKLVQILASYNHRHGMSVK"
     gene            complement(14593..15147)
                     /locus_tag="PXD69_001576"
     CDS             complement(14593..15147)
                     /locus_tag="PXD69_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283769.1"
                     /translation="MKLCKCPICHSDISFEALIEDDAGRELLNTIVNIGGNCGRAVVA
                     YLGLFKPQKNSLANSRALKIVQSLLELYPPSNVLEKALMDTVEQVRRNRRETGRCEPL
                     ANHNYLKKVYESVKPQFAVVRSEAKAVSSLEQQQRQADQKKHDAVMYVERMKQMGQLE
                     AVKNTESYQIWLKWQEEKQNATAN"
     gene            complement(15147..15317)
                     /locus_tag="PXD69_001577"
     CDS             complement(15147..15317)
                     /locus_tag="PXD69_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283770.1"
                     /translation="MEYQKIPEYRLCKKKSGEIVLQQLVICELTPATWHNPYPDSRTY
                     WVDLETIEEGTE"
     gene            complement(15388..15963)
                     /locus_tag="PXD69_001578"
     CDS             complement(15388..15963)
                     /locus_tag="PXD69_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5420 family protein"
                     /protein_id="HDL6283771.1"
                     /translation="MKFRFFKGDITQEPLKSIYADYQVSKEERKDKLNAILEKYPFND
                     GLISRSGWFHRIVIGIACKATNISQVLDVKGFKVGKFNDEFYLVKPDKRYEKGKELAE
                     DFKAINEIYEKHRDFSPYILKRLNMLYFVSDFSYSPTSGRSYLAVAGICENTLLVEMP
                     MPIDKNDEPFPEIAEGLVEIKESEFLAIQGK"
     gene            complement(15986..16168)
                     /locus_tag="PXD69_001579"
     CDS             complement(15986..16168)
                     /locus_tag="PXD69_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283772.1"
                     /translation="MTEQEKNELNSQLNEALMQIIQAQKYLKQSDFIRSGVYLGTVQD
                     LLPKVHLKLLTANRKH"
     gene            complement(16235..16381)
                     /locus_tag="PXD69_001580"
     CDS             complement(16235..16381)
                     /locus_tag="PXD69_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL6283773.1"
                     /translation="MKTEQKATEFDRYKHYAEKAAEAERKGNYAEAQDHWKVAKLSAK
                     KTAN"
BASE COUNT         4386 a         4094 c         3099 g         5068 t
ORIGIN      
        1 ccgcaccaag ccctgccgca atcattgcat ttgattcggt tgctccctta taccagccta
       61 caataattcg ctcactgtta aggcttgcgg ttaaggttgt gccggtggca taagtgccac
      121 gccagcccat tacaccaata gccggtttat cttcaatcgg ggcagaaacc gattctaaat
      181 ggctacgcaa ggcaagggca ttttcatcat ctgaaaacgg cgaaataatc acgttataat
      241 gcgtaccggc aacactcgcc aacgccggag caattagggc attacgctga ccgttatcaa
      301 acgcacgagc ctcaagggtt aaacctgttg ctgtattgcg tgttgcaagc gtgatttcat
      361 tgctgatttc gccttttgct tttgaggtca gtttaagtgt cgtttcactt tccacacttg
      421 ccaccacagg gctataactc gccgcattaa tcacattaac taaacgagcc acaatcgcct
      481 gtgcttcttc gccttttgcg gctgcaactt cgtaagctgt gccggcaatc gtaatacgca
      541 ccacaccggc ataagttact gtgccggtaa aactaacttg ccctgttgct gcaatacctg
      601 cctcgtggtc ttttaagccc accaccgtta aacggattag cggattattt tggattgctt
      661 ggcgaaccat taaatgagct accgagcctt taccaaataa attttccgcc tccacatcgc
      721 taaaaatctt ttgcggagca gtaaaagcag cctcaccgtt tagcattggt gcaacaatta
      781 gcacctcttg ctcattggtc ggcaaggtgg ttactgcatc tttgttgttg tattcggtca
      841 gcacacttgg tttgcgaata ctgttcggga ttttctcaaa ttcaattttt gacattattt
      901 gccccctgtt tctttagcgg atttggtttc tttgacgaca atcaaatcgc catccgcaat
      961 gcggcgttga tagtaaaggg tgttttcaac ctctactgcc tcttgttcaa tatagtgatg
     1021 cggtcggttt tctaccggca cacgcacccc tttagcggct ttcactttta acatctaatc
     1081 accatcctta aattctgttc taaatgccgt ttcggcattg ttattcgggt caaaaatccg
     1141 attattaaag cccgataaat cgccttgcgg ttcatctagc ttgccttgat actgcttaaa
     1201 gacttgctca ttcggctcaa ccccttcggg gaatctacca tcatcaagca cattgcactc
     1261 gttgtagctg atttcaaact caatagcata agcagagagt ttctctttct tcacttccgc
     1321 attattccaa atcgtgcgga ttcgcttagg ctggataggg tggactaaac cgtctaaagt
     1381 ctggttaatc aataaggttt tcaccgctcc cagcaactga ttaaccccca cctcacgact
     1441 tgttacccca cctaaacgcc cagcagtctg atttcgcatt gagcgagtaa taaccaacac
     1501 cacaaacaca tcagtggctt gatagcgttt acctcttact cccattgatt tcgcctcgaa
     1561 cgccgagcca ccataagaga caagacaagc aggcaaacgg agaacatcta acttctcatc
     1621 gttaatttcc ccggcatacc cagcaacggc atacaccatt ttgcctaagc ccagcgttaa
     1681 acgctcaatc aaagcacgct caattttgct aatcatcgct tatcacgccc ccaaatacgg
     1741 ttgcccccgt taaaaaactg cactgtattt tcgccagtag ccgattcttc ctcattggtt
     1801 tcatcaaccg ctaacgacac tacgccctta gagatgtttt ccagctcttt taagcaaagt
     1861 ttgtagcggt tttccacctc ttcggtcatc gttactaatg atttgctggt taaatgataa
     1921 cgagccaaat cacagcaaat acgctttaaa ttttgcggta cagtctttaa tggcagacgg
     1981 taacgcccac ttaaatagcc atcaatttgg ctggaagagt ccgctaaagc tacttcaaga
     2041 gtcgcttcat caaccacgcc taccatttca cggtcggtta gctcaatgga ttcctgttcg
     2101 ccaattcgca aaacgaaatc atcaaccaac gcatacatta cgcatcgccc tcaacaacag
     2161 gtacaaactc caaataaggg tcgttggcta aggtaataat ttgttcatca ctcaaggctt
     2221 tacgagcaat ttctaccgcc gtttctttat taaaacggta gccacaacgc ccataggtgg
     2281 cttgtgggtg gatagatttg agcttaactt caaaagcaat aggatttatc aaagcaccgt
     2341 catcaggctt agtttcactt tcaggcggtt taggttgttc atccgtttta tcttcaggct
     2401 gttcattcac cttatcttca agcggtgtgt tttcgtttgt gttcaaagct tcattgtcat
     2461 ttttctttgg ttttgccatt ttgctaccct ctcaaaatgg gcgtattgct acgcccaaca
     2521 ttaaacttat tcagcaataa atggattcac taccactttt aacacacctt ttaaggtgtt
     2581 ggttgtgccg tcaattaatt ctgcttcgag taatttgcgt gcagcaaact caagcgaagg
     2641 tggcacaagc aaagtggtcg ggcgaatatt taactgctta tcgccatcgc cttttaaggt
     2701 gcgcattgca gttaatactt tttcaagggt ttcactattt aactcactat cttcaacacg
     2761 gtgaattaac tgccagaaac caaaaccggc attaccacga gcacgcacac cccataaata
     2821 ttggtctttc ataaagacgt ggtctgactc acttggatca aacttcgttt caatttcagg
     2881 tgtagtacgt tcttgccaaa ttaacggctt aatggcttgg ctatcatcta gcacatagaa
     2941 cgcaggctta ccgctggcag agcctgtggt gatattactt tgtgttttac ttgtgccagt
     3001 tccatcaaca ttctgataaa cagggtgatc ggtatcaaag aagttctgcc cgtcatagca
     3061 aagggttgtc ttaccttttt tcaacaaact aaataccaaa tcatcaggta attcagccgc
     3121 actttgtgcc gcttgtttca ccattggggt aaataagccc acttggtcat cttcaatggc
     3181 agtacgaggc acagcaacgg ttgattcaaa taatttattc tcaatcgtca ttccttgtgc
     3241 ttgcatattt ttaatttgac ggtcgcccac ccactcttgc attttcggga attgtcccag
     3301 ccaagcatag gtattagtag cggtgctgga gcttaccttc attgcaaccg ttccccattg
     3361 tggttcaagc acttttaaac cagcactaaa ttctttacga aatgcagtat caagtgcttt
     3421 taataattca gattttttaa acattacttg gattcctctg ttttatattt ttcaatgtaa
     3481 gctgcttcgc ttaaaccaag cgattttgct gctgcaattt ccgcagcaga taacgccact
     3541 ttctccgtac ctttgttcgg gtcttcaccc cccgactgcg tacttgctaa agcggggtta
     3601 ggtgttaccg ttttcaaaaa gtcggataaa gccactaaat cttgcttacc gagcttttcc
     3661 gcccacgctt tttgagccgg caataaccga ccgtcagaaa gagcggtttg aattaacgca
     3721 tcacgctctt tatcgttgat ttgctgtttt aagccgttca gctcggtttg cactgcttgc
     3781 aagtcgctta acgccacaaa cttcgccggg tcagggtgat tcactttggc agagagtgca
     3841 accacttggc ttttctcttt tgccagctcg gtataaacat cacttaacgc caccgggctg
     3901 tcgcctttgg ctttctcaag tgcggtcagt ttttcggtaa tctgctcatc ggtcgcattt
     3961 gccgacaatg caaataattt aattaagagt tctttcattt ttggattttc ctcttcgggg
     4021 gttaaaaatt tggcaaattg gctagacatc gcaaccacct cttgcagatt atgcaaggca
     4081 gggcggttag ttaaggcggc attaagtacc ttaattacca ttccgctgcc gtctgtcaaa
     4141 aacagtggcg agagatagcg ataaacgccg tctttaatct cttgggtcgc ttgtggtgtc
     4201 cacttaacat ccgcaaacaa gccttcgccc gagatatatt ccgccttggt aatccaaccc
     4261 gcagcagggt tgcctttgcc gttctcggcg atgtacaggg tctgatgctc ataatcaatc
     4321 atcagatcaa tcgcagtgtt gttaatatca tcggctaacg catagccatt ctcgtcacct
     4381 acataccaac gtcctccacg cccgtcttga gcctcaaacc aaccaaaagg gaaaagttga
     4441 atacgtccat ttgcctcttg gttgagttta aaactcaatg caatggggtt tagtttgaat
     4501 ttatgcttaa acacaaaaac acctcaaaac aaattaatga ggctaaagaa tagaagattg
     4561 agaaaaaaga gtaacgggga gcaacttcca caagttgcaa attttcagaa aaaaacaacc
     4621 gcttgtattc agcgaggaat gtaacccatt ttaaaacgct ttaaatccgt tttaaaaaat
     4681 tttaaaaaag ttggaatgat aaatcaccat aaaaaaaaca aaaacgccac agagagcgat
     4741 ttaggggcta tctgtggcga ttatcttatc gcttaatcca gcagtttttg ccagtaggct
     4801 tgcacatcgt ccaaaatatc ttgcctgtct tgcgaggtta attgtaaaaa aggtcgggct
     4861 tcaattttta ctttacgccc acgcccagcc ataccaccga attgatgaat agcagcataa
     4921 ggctcatttg tgccaacaat cgccgaatca ttattataat cagcagtaat gctgcccatt
     4981 aaattttccg tatcaactaa cggcgtgcct tgccgatgtt ttatacccag ccatttcggg
     5041 cgaccgccct catcaaaatt ggtcagtacc gccgattcca ttttgccggc aatattccgc
     5101 atcaagtctg ttttatttgc cgttttagca gcaatacggt taagcgtggc aataatttca
     5161 tcaatgccgt ggatttggat ttcaatcatt tttaaccttg caagttgatt tttaaaataa
     5221 acaggggtat attcctttta cggttattag aaaagcggtg ataatctccc tgccgcagcc
     5281 tatttgagat ggcaagtcct gctcaaatga ccgagagcgt gtgtaagtga ccgggagcct
     5341 tacctaataa ccgtattttt caacagcagc ttatccaatt ctttttgtcc aatctccctt
     5401 gttgatacca gaaataattc accaaactct tctaagtatt tcaccacaac aagaatacga
     5461 taatgctcaa agtttcgtat aaagctgaaa tttttgcctt cttgcaaaat atgattaggc
     5521 tgaaaaatta catcaggaat atttgcatac acatcaaacc caaaatcctg cccctcacgg
     5581 ctataaaact gcttaatcag tgtgtcatcc gaaagccata ccgtgccgac tttactgtcg
     5641 attaagcgtt gtgtttcctc acttaaccga ccagcagcaa atttaaagtt ttgattaagg
     5701 gcatttcgca ctttaaccat ctcatcaggc gagagttttt tcgccccatc tttggcaagt
     5761 gccacagcct cttctaactt gttaaacgcc tgcttaaatt caccaccgct catttctgct
     5821 ttggtaaatt ggtaagccag cttttcaggg tataaatcca aattcggctt ataggttaaa
     5881 cgccccacat tataatcaaa acctttatca gccaatcgca ccgtaccatc agccaattta
     5941 aagccaatgg tttcctcttg gttgcctaac ttatctttcg gtcgttttgc cttcactaaa
     6001 aacggctcgc tactgccgac ttcgtcaatc cctttacgct ttaaatcccg ctcacttaac
     6061 gcaatcacgg tacaacggca attaaagccg ttcggcggat aaaaagtcgc ccaaaacgga
     6121 tcgtcataac gataaatctt accctgtaat gcttggtgag cagggcgggt gcgttggtcg
     6181 cctaccgccg aatattgcca ataagggcga ttatccacat tatccatata ccgctgataa
     6241 cgagccgcag aataagcctg ttgcatattg gtacgataaa tcgtattcaa gcggcgaggc
     6301 gtgccgaaat gctcgccggt tttcgggtcg gcaagcagtt tgccatcaat gccacgacta
     6361 atcgtcgtgt ccatacaccc agcctttccg ttcaaattct gccgtaagcg ttttcttcca
     6421 ttcattaaag gatttcccct cacgccgtgc tttttccatc gactcataaa tatcacgggt
     6481 catttcaagg ctagtgagct tgctaatggt ggcggctcgc cccaatgcag aatcaaataa
     6541 ttcctgctta aacactttat tcgcaagcaa cttcttctgc cgtaaaaact caatcgcctg
     6601 cttaggctct agtccaatgg caaaattaac tttctgcatt cgcagcccct aataaatccg
     6661 ccaaaaataa cgcattcgct aaatagcggt cgtgttcttc actcactaaa tcagggtagg
     6721 ctgccgccaa tttttctgct gcctcatcat aagagctaca cgccattacc accgccaccg
     6781 cctttttcgt gatggggtca aattgggcgt taaaatccgg cacggaaaaa gcctcgtctg
     6841 ccaaatcatc taaggcatct tgctctttaa tgcccgtttt ggtttgggcc gacaaagcgt
     6901 gaaccttgcc cccacaaccg cattcgcaag cggtcatttt ttgcggaaaa tttgcggata
     6961 accccaccgc ttgtggcggg gcagaacgcc ctaacaccgc ttcattttct tgagcttcgg
     7021 gaataccgag tttatccatc gcccactgca ccggaatcgg cattccaata tccaccaatt
     7081 tcggcaagct ctcggcaaat aacgccaagt cggcaggctc tttggtatca aactcaaaac
     7141 tcggaatgcg ggttgggtcg atattgccaa aattaatttg cagaaacggc agaataattt
     7201 gttgggtaaa cgtctgcccc agctgtttca cgtccgacac caacaaatca cgccgcactt
     7261 cgttatgcac attgccgagt gcattggtag agcttttgcc gtctgcaccg ctggttaagg
     7321 tttgccccaa aatcaagcgg gcgatagact tctcacacca atccaccatt tgcaaaaacg
     7381 gattattgcc ggctgcaccg cctgcattag cggcgttatg caactcaata ctcatcgact
     7441 ccggcataat tccggcagcg ttgtgtccga tttccgctaa tgcacgttta agcgtttgtt
     7501 tttcgtttgg tgttgcccct gcaccgtatt taccaatgcg gataggcata ccatacagct
     7561 ccaaaaactc ggcaaagtcg tggatagagt agtgtttaaa catatacagc caagccagcg
     7621 agcggaataa attattgcgt gccgcctgtg tggagcggga tttatgcgta tgcaccaccc
     7681 agccaaattc tcgtaatggc tcaccttcgg tattttgtcg ggttttcagc aacagattgt
     7741 cgtgcttatc ccacttaaac cacgattgag gacggtggat aaaggcgttc ggataccaca
     7801 atttaccgtt aaacgcccat tcaatttcga gggcagcaaa accgtgtccc acagcgtcca
     7861 tacagtccat caccaaatct tcaaggttgc cgagctgata aaataactca tcaacctcat
     7921 cacgcagttt ttcttcctgc ggtgtggcat tgcgaggggc aacaatcgcc caatctacgc
     7981 ctaatgcggc acgcttacgg gtttggatat tggcaaaaat agagctgtcc cgctcctcaa
     8041 tatccataaa taattcgtgt tgagcggtaa tatcgccatt ctccgtatct tcaaaaatcg
     8101 ctttcatttt agcaggcgta ataaaattgc tcggatggtc ggagagtacc cgacctgtag
     8161 cggtaatttc ggctaaatcc gtctgcaatt cttgattttt aatcgggttt aaattcggtt
     8221 taatctgctt gttatgcttc tttttgctca taaattttcc ttttcagagc ttagttacgc
     8281 tcaatatagt ccccctcttt agcaaagagg ggagttacat taatgccgcc acttactgcg
     8341 atactcaccg tcaaaatcat ctacactctc ccactcaatc ggggcagagc tgctgagtgc
     8401 atttcgccat aacatttcca acgcatccgg accatcatcg tgatcggctt tcggaaaatg
     8461 gcgaagctgg ctttcaagcg tagattgcga gcggtgcaac aaaatcaaac cgttggcaat
     8521 atgcggttgc aagctctcaa tccgtaacat cttgtcactg ttcggcttgg ttgccgttgc
     8581 cggcaccggc ttaccacgct gggcagaacg cttgaccagt tccgtctgca aaaactcctg
     8641 aaattgcacc gtctccacaa accagcggtg acagttatat tgcgaatgca gtctaatcac
     8701 gtcctcaata attaaatccg gcaatcgttt tttgatttgt gcctcaacaa catagagctt
     8761 gccactctca cgatgatagc caccgaccaa aattgcagat gggtcacggc ttgccccagc
     8821 tttccccatt gaggggtcta acgccccgaa ataaatcagg tcatcaggca gttccgtcca
     8881 atactggata ctgttggcaa aaatcgcatc atcacccgag acagggtcat tttgatactc
     8941 ggagtcaaat gctgagtgcc catcactagc acggattttc atcaagtaga ggatagggcg
     9001 agctaaccaa gagactaacg ctcctttatc catttctgct ttatgctgtt gataaaagag
     9061 atcagacata gtgtcatcgt ccccttcttc cgagaggtat atattttccc attcgtccca
     9121 taacgccata ttgccgggaa agcgtaaaat ggctttaaaa cgaactcgcc gccaaccttt
     9181 tgtatttaaa atacggctaa gcacactgtc ataatgtaga attgtgccga catagataac
     9241 atcaaacttt tcacctgcag caccaagttt taaaactgct tttaaaaccc agttatgcaa
     9301 tttattacgc tgtgcaggtg tttctacgct ttcatcattc tcaatatcat caagtactac
     9361 taaatccgga cgataagctc cgtggcgacg accacgcaat ttttgcccag cccccacagc
     9421 ttcaactttt tgttttttag ccgtcataat gacacctgca cgccaaacct tgccttgtgc
     9481 aacctcgggg aaatcaattc ttaaacgagg gttagattca atttccactt taatagcttc
     9541 aagcatactg tatgcctgtt ctttggtgtc catcgcaata atgatgtatc tttttaaatc
     9601 acggactaaa caccacagcg ggaataattg cgtacaaatc gttgattttg cctcgccacg
     9661 aggggctgca atcgcttggc ggactgactt agaaagatca cttaccgaaa gcggtaaatt
     9721 ctcaaagaga taatgatgca actgtgattt atgttcagac cgcacatagt gtggaaaata
     9781 agcctgcaca aaatactcaa agccgtgaac agggtctaaa accttttgac ggcgttcgct
     9841 aatggcttgt ggtttatcgt cccaaccctc aaaactcgct tcgatatttt gttgtaactg
     9901 tcgccgtaat tcttccagtt ctttttcaaa ttctttgatt ttcataaatt acatacaagc
     9961 tgcgataagc aacaaccagc cccaaccgtc tgtaccgttg agcattagtt ttattgctcc
    10021 gaaaatacaa gcaagttgga caatccaacg gaaagagtaa tgcttatgca ctacagtttg
    10081 ttttttctta gccattactt aaactccttt ttgaattgca cttctagctc atctaacatt
    10141 tctaaaaagt caggcaataa atgcggtttc ttggttttga cgatattcgc catcatctca
    10201 atcgcacgca tagcggttgc cattgcactt gtttcaggca atagtttctt gctcgatgcc
    10261 gtcatcttcg caaacgaatc agccagagca gctaatgcct caaccttagc tgcggttggc
    10321 atttcggtgt tttcctcaag ctccgtcatc aacgtgcggt acttaattaa aaaaccggct
    10381 aacaagcctt gagcgatatt ctcaatacca ccgcttgcca tcgcttgcac atcacgagct
    10441 ttttcccagt tatcaccgtt cttttcagca gccgctttcc aacgccgtgc cgtgccgaat
    10501 gatacccctg cacgttctgc tgccatttcg aggcttaaac ggtcaaacac ataggcttgc
    10561 cgaaccgctt tttgtacttc aacatcgtgt gccatacgcc ctctacattc caaatttcag
    10621 gcgtaacaac tcaaaaccca cagcaacaat gccaccaccc aagccaccgg caactacagc
    10681 atcacggcgg tttttacgtg ccatttcatt cactaaacga ttagtcgctt ggatttcacg
    10741 gtgtaagcgt tcgatttctt cgttttgttt atccacctta tcgtttagct catttaatcc
    10801 acctaaaatc aggtctaatt tttccgaatc ggtttgcttt tgttttttac ggctcattac
    10861 ttatccgcct ttttatcaag tttttggttt acttctttga gcgagtctaa aatatcgtcc
    10921 agcttttcct taatccctct attcacttcg tgggcaagct ctttggattg atatttgctc
    10981 tccatttctg cttttagctc ttttaccgtt tgctcattgc ggttgatacg atcaaatatg
    11041 accttgccta caaacgccac taacggagca actacaaaag agatcagcat ctgaaacagt
    11101 ttttcatcaa tcataacgcc cccttttggc tcgcccgacc gggtgttgat taccttgtgc
    11161 caccgccgca cgcaccacgt tatgcaattc tgcaaggtca ggacggcggc gataaaaacg
    11221 ccattgttgc caacgctgtc tgagtttttt aattaacttc attctggcaa acttcctcat
    11281 aggtcagatt gtgtgcaagc acttggcgtt tcgtttccat tgtgtccgca cggctcgggt
    11341 aaatcagacc gaacgccgtg caacccgttg tcgtcacgga agtaaccgtg ttggtgcaac
    11401 tgctcatcaa tggcactagg ctgaatacgg cgagtttcac taacgtgttt ttgctgaatt
    11461 ttggcatttt taacctctgc atttttttgt tgaatttcga ccgcttgttg ctgcttttcc
    11521 gcctttaatg tagcggtaag tttccgctcc tgctttaatt gccagctttt ataaaaggca
    11581 taggctaaaa ttgtgcttac tacaccaacc acacctgcaa tttgttgagt aatcattctt
    11641 cagcctccct tgagcgttct ttttgtttta acgcacttac cacccctttt gtggctgggc
    11701 tacccaatac acaaatacca gcataagcaa accaccagtc ggaaataaac ggcttatcgt
    11761 aaaggtaggc gtgaattaaa atgcccgata acactaacca gctcataaac tgaataaagc
    11821 cagtggtgct ggctgtgccg tctttattgg taattaaatc aagtaaaaat tgcttcacga
    11881 ttattcctcc accgtgtctt tggcaaaata acgcaaatta cccgccattc ggttaatcca
    11941 acctctacca aaacggtcaa agtgtttgag tttggtgtaa aactcaaggc gttctgcctg
    12001 aaataacaag cccacatccg caaccgaata acgctcaatc gcagccaaag tcactttacc
    12061 gataatgccg tcatcagcca cacctaccgc tcgctgtaac attcggctag cattgcccga
    12121 accgtggttt acacacgcat ctaaaaactg aaaagccaac tcaggcggga actgctcaca
    12181 gttataacgt tgccaaaagg ctttgaggta aatagttttc gcatccgcac ggctcattgc
    12241 acgcatagag ccggtatagc cattcgcacg ggcagtatgg atagtgatac cccaattcgt
    12301 ttcgccaccg gggtctttcg ggtcgttcac ataaccgccc tcgtgtccga taagacggtc
    12361 aaatgcaaga ttaaagtcag caatagttgc cttgtttttg ataggttcag tcataaaaaa
    12421 agcctcttta aattcaatga tgatttaaag agactttaat gatttagagc aacggggagc
    12481 aggcgaaagg attccacact taaaacaagg tagcttgcga aacggtatgc ttacgctgat
    12541 aatatcgtac tgcctcccac gcaacacgat cacacacgct gtatttaggg caaatttgca
    12601 taatcgcaag cctgccactt agccctcctt gctcggttaa ttgacaataa tcggcataaa
    12661 tctgctgatt acgcaacatt cttaatgcgg tttcacaacg tggcaaatag acctcgcaag
    12721 ctcccatata agcctgtaat ttcactgcat catcttgccc taatacctct ttgagcttat
    12781 taaaatagag ttttccgtta gaaaattgga atgaaaagcc accaaaggct ttgattagct
    12841 tttcagttgc cggcaaacca atcacgccca caatttcttt caccgtttcc ggcaaataat
    12901 gttcgacact ttcaaattca gacataaaaa atccccttga ataatttcca cgaaagccat
    12961 tatccaaggg ggttattcaa atctgtaata cttacttaaa aatttttttg caaatttttt
    13021 aaaagctcag cccattttgt gtacggcata tctgatctag ctgcggttga tgacagttct
    13081 gtctcccacc gcattactat tctttgcccg acccctaata tgttagctac ctctgtttgt
    13141 gtgaggttat ggtgctttct tagcattttt aagttgcttg gtgtgtatcc aaactctggg
    13201 ttttcaatca ttcacctccc tccattaaac tagctattaa atacagcaac aacgataggg
    13261 tttctaataa tgctctcgcc tttatcttct ccgcctcttg cactatcgcc tttaactagg
    13321 ataaagtttt gcccacagta tgactggaaa cctttaaatt caacatcaaa ttttttgcaa
    13381 gcatcacgac ctagattttt aatagcattt aacaaacctg cttcatctgc attttggatt
    13441 cccattgtac aaatgccgtc taattcttca tctgtttttt caccatcgac ccaaacaaaa
    13501 gaatttccta attcatcgcc aacttgatgc acatctgtag ttgctcttaa accataaaca
    13561 gcgaagcagt cttcatcggc atcgtttagt aaagcattta aaagtttttg gtaatctgtc
    13621 attttaattt ctcctgtttg gctatgggtg cattatagta atataattac ctattgcaag
    13681 tgatttttcg tttttttctt aaattttttt atgtaaataa aaaagaccgc ttgaaagcgg
    13741 tctaaattta ttttttcttg gttgcagaaa tggattttgc aatggtaaag gcagtttccc
    13801 aagcctgttg attatctgta acctcaattt tacggcaagc aatcgcctcg ttgttaaagt
    13861 cagtcatatc aaccttgtcc gaattaacaa gcaaaataac acggcgtaaa gcacaagcag
    13921 caataggatt gtgatcgtgc ccaaacgaac cagtttccat tccgtaagct acatttctta
    13981 actgttgata atcaccactt acaagagcat ttgctgtttc ttgttcagct ttttctgtca
    14041 ttgctattgc tggtaacgac aataagcata aggttgttaa tagcagttct ttcattttaa
    14101 atacctttaa aagttgatta aaaaacacct aaaatctacc acaaaaaagc ccactattta
    14161 aagtgggcta tgcaataaat ttattattta acactcattc cgtgcctatg gttataactc
    14221 gccaatatct gcactaattt atgcaactga tcatctgtca gccattgcac ccgctcaata
    14281 ccaaacgagc gtttggcaat ggcgtgggcg taatcccacg gcttttggct ttgatacagc
    14341 aacgccccga ttttatttat caacccttgc cggtgagggg cggttttact tgctgttggg
    14401 cgtttaccgt attttttcga cttcaccaca aaccctttag ctttcattgt ttgcagtacg
    14461 gtcattaatt cgctatcggt catcattgag cagcttggtt tatccaccgc ctctaacaac
    14521 agcattttat aggcgttatc atccagtttt agctcatttt tgccgatatg gattttctgt
    14581 atcatctgct ttctagtttg cggttgcatt ttgcttttcc tcctgccatt tcagccaaat
    14641 ttgataactt tcggtgttct taacggcttc cagttgcccc atttgcttca ttcgttccac
    14701 atacatcacg gcatcgtgtt tcttttggtc tgcttgccgt tgctgttgct caaggctact
    14761 cactgctttc gcttcacttc ttactactgc aaattgtggc ttcacgcttt catatacttt
    14821 cttcaagtaa ttatgatttg ccagcggctc acatctgcca gtttcacgcc gattccgtct
    14881 tacttgttcc accgtatcca ttaaggcttt ttctaacaca ttagagggag ggtaaagctc
    14941 caataaactc tgcacaattt tcaaggctcg gctattggca aggctgtttt tctgtggctt
    15001 aaataaccct aaatacgcca ccaccgcacg cccacaattc ccaccgatat tgactatcgt
    15061 atttaacaac tcacgccctg catcatcttc aatcaacgcc tcaaacgaga tgtcggaatg
    15121 gcaaatcggg catttgcata gtttcatcat tctgttcctt cttctattgt ttcgagatca
    15181 acccaataag ttcgactatc agggtatggg ttatgccaag ttgctggagt tagctcgcaa
    15241 ataactaatt gttgtaacac aatctctccc gatttctttt tacataaccg atattcagga
    15301 attttttgat attccatttt atgctcctat aaaacacatt attcagccca cttaaatagg
    15361 ggttaaatgg gctgtaaatg ggttttatta cttcccctgt attgctaaaa actcactttc
    15421 tttaatctca accaatccct ctgcaatctc aggaaatggt tcatcatttt tatcaatagg
    15481 cattggcatt tcaaccagta aggtgttttc acaaatgcct gctacggcta aataacttct
    15541 acctgatgtt ggggaataac taaaatcact tacaaaataa agcatattca aacgttttaa
    15601 gatatagggc gaaaaatcac gatgtttctc ataaatttca ttaattgctt taaaatcttc
    15661 tgcaagttct ttcccttttt cgtaacgttt atcaggtttg acgaggtaaa actcatcatt
    15721 aaatttaccg accttgaacc ctttaacatc taaaacttgg ctaatattgg ttgctttaca
    15781 agcaatccct ataactattc tatgaaacca gcctgaccta ctaattaatc catcattgaa
    15841 aggatatttt tctaaaatag cattgagctt atccttgcgt tcttctttag atacttgata
    15901 atctgcataa atgcttttta gtggctcttg ggttatatcc cctttaaaaa atctaaattt
    15961 cattcttaac tccttactgg ggtggttaat gtttccgatt tgccgttaat aacttcaaat
    16021 gcacctttgg caacaaatcc tgcaccgtgc cgagataaac accactgcga ataaagtcac
    16081 tctgttttaa atatttttgt gcctgaataa tctgcattaa cgcctcgttt aattggctgt
    16141 taagttcgtt tttctcttgt tcggtcatca tctcctccta aaacggtttc ttatgcatac
    16201 gtttacaaaa taccgctcgt tgccccgccc agtctcagtt agcggtcttt tttgctgata
    16261 attttgcaac tttccaatgg tcttgggctt ctgcataatt gcctttacgt tcggcttccg
    16321 ctgctttctc ggcataatgt ttgtagcggt caaactcggt cgccttttgt tctgttttca
    16381 ttttttcctc ctgtggttaa aacactttat aaatgccctt ctatcttgtc cccctctttg
    16441 aaaaagaggg gctaggggag atttttaaag ggcattgaaa aggtttttta actaagactt
    16501 tctttttaac tgatttaaaa tatgcaaatg atttaataac gatgcatatt ctttatcatc
    16561 aaagtccatc attattaatt ttttgttatc acaaaagtgt actgttacat tcccgttaat
    16621 attttctatt gaacaaacct tgtctgt
//
LOCUS       DANLXO010000059        16292 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.059, whole genome shotgun sequence.
ACCESSION   DANLXO010000059 DANLXO010000000
VERSION     DANLXO010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16292
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.059"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(417..1457)
                     /locus_tag="PXD69_001581"
     CDS             complement(417..1457)
                     /locus_tag="PXD69_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL6283774.1"
                     /translation="MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLEC
                     SAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKANILLSTCEVDSRYLSRRDLSSFV
                     KDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKG
                     SIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQ
                     KQEDVENIRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSR
                     DDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQERLKEFNQWLGQEVI
                     KFKPSKLLQRTQ"
     gene            complement(1466..3268)
                     /locus_tag="PXD69_001582"
     CDS             complement(1466..3268)
                     /locus_tag="PXD69_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HDL6283775.1"
                     /translation="MENENTITEYEVLAANPLHDKREAQSKYWAGYTVTEISRQLNIP
                     VSTIASWKKREKWDEISPVGRVEATLESRLNLLIMKESKNNNDYKEMDALRRLLESTA
                     RIKKYSNGGGNEADLNPNIKNRNKGDRKKPEQNAISEEQAELLINGFLDGMFHYQKKW
                     HEAGLTHRIRNILKSRQIGATYYFAHEALVDALVTGRNQIFISASKKQALQFRAYIVA
                     YAKRVADVELKGETITLPNESQLIFLGTNSKTAQSYHGNLYFDEIFWVNRFEEIRKVA
                     AGMASQKQYRITYFSTPSSITHSAYLLWSGKLFNRKRPKAEQVEIDISHANLKNGKKC
                     GDGQWRQIVNIYDAEAGGCNLFDIEQLKLENSPDEFEQLFMCEFIDDNQSVFKFTMMQ
                     RCLVDSMEVWRDYVFTDGYQRPFGNKEVWVGYDPSYTGDRSALVVIAPPKVDGGKFRL
                     LEYRTFKGADFAEQAAEIVAICAKYNVTRLAIDTTGLGVGVYEIVKKERPDAVALTYN
                     VELKSKMVLKGLDIISKGRFEFDSMHAVEVGASFMAIKKQITNSGRQVTYVADRSEEA
                     SHADLAWACLQVFINEPFDGKLEETTGTVDFLDD"
     gene            3418..4245
                     /locus_tag="PXD69_001583"
     CDS             3418..4245
                     /locus_tag="PXD69_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDL6283776.1"
                     /translation="MTTKSKWFVVATEGATTDGREISREWLTQIEENYDPKNNYGARI
                     NLEHFRWRWFEKDDPHSYSYGDVLAVKTEEREDGKLQLLAEIAPTEALVKLVKDKQKV
                     YTSVEIDLNFADTGEAYLVGLAVTDTPASLGTEYLTFCAGATHNPLADRKQKPENLVS
                     EAVEANLEFTAEPEKGAWLEKFKAMFTKAKTDNDGKFAEHEKAMELLAEQFSKVSTEN
                     DRLQTELSTLQIEFTELQKQAGEFAEKFAKLEQEPSANYTPRPKATGAKAGDVQTDF"
     gene            4259..5287
                     /locus_tag="PXD69_001584"
     CDS             4259..5287
                     /locus_tag="PXD69_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDL6283777.1"
                     /translation="MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLY
                     EKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVASTTDTSGDGERKTTSIAKLVKQT
                     YHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDR
                     NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELI
                     DEWHRDDTDLVVITGRKLLADKYFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPF
                     FPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENIDYVVEDYGCAALIE
                     NITLKDKE"
     gene            5297..5986
                     /locus_tag="PXD69_001585"
     CDS             5297..5986
                     /locus_tag="PXD69_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HDL6283778.1"
                     /translation="MRMSPARAHFLRKTAESESATPNRENLEGLQGYDLVLAQLKAHQ
                     RQLKKIQSIERKIEFKRNNFEQYRPWVEGSLAKGSGVQDTVITTMLIWSIDIGDYPTA
                     LAIAQYVLMHDLAMPEQFERTPATALVEELAEAAKKARDQKQPFEAAVLKQANDLTAE
                     FDMPDPVRAKLLRELGELIQEAEPQTALEHYQRAIALDPQCGAKGLRDKLEKQLAKQA
                     EEPKPAEEQNE"
     gene            6098..6613
                     /locus_tag="PXD69_001586"
     CDS             6098..6613
                     /locus_tag="PXD69_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDL6283779.1"
                     /translation="MEQRNHVISIPKVNGYESSKNAIKPTAESDETITNNGFFPNIEL
                     LEVRNAMRIDGTVINERLKQAVIEAMATVNADLKAYRLNAEQAQKANLQACDDEQING
                     ESVLVYKYKRAVYCLAVANLYERYRSYDSTKDGHDKAEELESTAGDLKRDYHFAVRDI
                     LGENRMISELI"
     gene            6610..6822
                     /locus_tag="PXD69_001587"
     CDS             6610..6822
                     /locus_tag="PXD69_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL6283780.1"
                     /translation="MNTLIARQDDTLDELIFRHYGQTAGLVEQALEYNPELAHLPRLP
                     IGTVVTMPDIESRFATVAKSSVQLWD"
     gene            6828..7034
                     /locus_tag="PXD69_001588"
     CDS             6828..7034
                     /locus_tag="PXD69_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HDL6283781.1"
                     /translation="MHKTEQASYFGAIFGFFGSLTLSDWGVVVSILVAILTLLLNWAY
                     RAKEYKLKEREFELKLQNQGKKNE"
     gene            7027..7593
                     /locus_tag="PXD69_001589"
     CDS             7027..7593
                     /locus_tag="PXD69_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL6283782.1"
                     /translation="MSKSVKVGVFVCSVAAIIGTVKQYYSSEIRTSETGLAIIGNAEG
                     CRRDPYKCPADVITVGIGSTEASGEKINVNHKYTDKEIAERWIKDLKIAERCINRYFN
                     GDKMNENQFSAMVSAAFNMGCYNLRFYPNENGKYIQTTIHKYAMAKDFKAMCNRIPDF
                     NRSGGKVLRGLKIRREKEKALCLGQEVK"
     gene            7590..8045
                     /locus_tag="PXD69_001590"
     CDS             7590..8045
                     /locus_tag="PXD69_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283783.1"
                     /translation="MIVKLCQMTNKHFSPLMIVLVLVGVLANFVQFRQNESLKADLQA
                     RTTQNQLIQADNRNLANQLENSQIQLEAYQKQVDDLNQKVLAKMKQAEQRSNEILNEL
                     EKHKKWADSAVPPSVGKLLNQRKRAVSHPQIEPDNLSEKAGVPNTGNRD"
     gene            8194..8415
                     /locus_tag="PXD69_001591"
     CDS             8194..8415
                     /locus_tag="PXD69_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HDL6283784.1"
                     /translation="MSDQIDRANELAEKAREAALAKILQNQTACTSLFECEDCGEPIP
                     EKRREMVIGCTRCIECQTIYEHKQKGYRR"
     gene            8412..8897
                     /locus_tag="PXD69_001592"
     CDS             8412..8897
                     /locus_tag="PXD69_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283785.1"
                     /translation="MIKPDRLRAVLTQTIDIFQANPEKLILQYDKGKIKSKGSQSHSF
                     EYHYDLELIVVDFPYHPDVLFVPVLNFVRNEQWELLQNPELQDKIEFEIDHNNHESYD
                     IYIRLPLTERVIVKEQDGHLTATHADEPNLADVSPFTRLTEYEVYLKDELIYQWAEPN
                     E"
     gene            8890..9348
                     /locus_tag="PXD69_001593"
     CDS             8890..9348
                     /locus_tag="PXD69_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL6283786.1"
                     /translation="MSEPIEQVKTAFDSLLNNISKPRRRLMYQQIGRELARSQRRRIK
                     AQQNPDGSAYEPRKKPKKGVKSKIKSGKMFDKITQPRFMRLRLESEGVSLGYEGGDAV
                     IARIHQQGLIGRVRKDWDLKVKYASRELLGFTDDDLQMIEDYMINILAGS"
     gene            complement(9399..9677)
                     /locus_tag="PXD69_001594"
     CDS             complement(9399..9677)
                     /locus_tag="PXD69_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283787.1"
                     /translation="MEILFILLGLIGFGALLAIGFTTFAAIFGVVTTVFLSLLSLLAN
                     MVGLSIIVILISLYVLLPLNTFILIALIFSAILGFLCWYHSDRQSVNQ"
     gene            9716..12628
                     /locus_tag="PXD69_001595"
     CDS             9716..12628
                     /locus_tag="PXD69_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283788.1"
                     /translation="MSNNLKIQVVLSALDKLTAPFKSVVKQTEKLSQSLKVQRDELKA
                     LEKTQSKMQSFKKMDDSIKKSNETILKQTKHLDNLKNKISQMKNERIELKVKMDAKKR
                     EFQQITKGGSAWSARAAFLDKDFEKMQREYEKLGASISSVSRKRTEENRALKDSRHQQ
                     AKQLLYFRSLRRELRASGINIKAFAQSETNLTDKIAKANQLIDQQKAKLEKLNAVKAR
                     NEKYWATVEKVKNTSERLHNLGQRSMISGAAISAPVVGLGKGVVGMAQTAGKFEQFNA
                     ILEVTEGSAEKAKQSFDWVKQFAVDTPSNLDEAMEAFVKLRAYGLDPTNGLLQTLGDT
                     GAAMGKPVMQAVEAIADALTGENERLKEFGIKGSVVKGTNIIEYAYTDKLGKQQVAKV
                     NKNNRKEIEQTLTRIFNEKYAGAMEKQAKTLVGIWAKIEDYWTNFQMQVMESGAFDWI
                     KNKLQWVLDSLDKMAENGELQKWAEDVGAVIQETVQGLWAFGEKIIEVVKWLASLARE
                     NKGLIATFVKWSAILGSSLTVLGAFAVVASFALYPVARLALGIGKFTGASTLLNKALF
                     DSNDKFRLFNKSLYSSGTTAAFVKSKFNQLATLPNVLGSSFNKLGGGIKMLIPQLKTK
                     VFWLNMLKGILGKLWSAIRFIFSPLKLLLGIFSPIGLAITAISVAGVALYRNWEKVRA
                     FFGGFLQGLSKGLAPVLERFKPLGKLFETISNWVKSTFKWLSDLLTPADKTSESLDKA
                     SSAGEKFGLALAGAIDLVTSPVQWLVDQFKWISENMPSWDTIGEGVKKAATAIVPTEH
                     AKQITKTAEMSNNMYDPNYTPPQLEQKWIGGLVGNGKGRGFATGGYTGNGGKYEPAGI
                     VHKGEYVMTKEATARLGVANLNRLNYGKVAGLTALASSVAFAQPMPAVKIDSRPPLTA
                     SQPSPTVAPVSQNIHITINATGGQDPQAIARLVAMELEKQQRQAQARARSSLRDRG"
     gene            12690..12869
                     /locus_tag="PXD69_001596"
     CDS             12690..12869
                     /locus_tag="PXD69_001596"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283789.1"
                     /translation="MMFKEKGYDEFVNECVRKGREEHKAGLGFTLEQSRLHIKKTIEQ
                     KSQELNEFQREVVYG"
     gene            12862..13149
                     /locus_tag="PXD69_001597"
     CDS             12862..13149
                     /locus_tag="PXD69_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6283790.1"
                     /translation="MAKITIKPQALSQFDEIVKSVIEFTGFETSGIRLQSDIFDKIEQ
                     IAFMPLSGRAREDGTRETFVRRYRIVYDYDRQADEVIILAIIHSSRLYPRP"
     gene            13278..13883
                     /locus_tag="PXD69_001598"
     CDS             13278..13883
                     /locus_tag="PXD69_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL6283791.1"
                     /translation="MSEPNHAEQIRRLDNIIRLGTIAEVDLTTATARVNSGGITTDFL
                     PWLTFRAGTSQTWSAPTVGEQCVVLSVSGEFTTGVILFGIYTQNAPSQSADEHLFRFS
                     DGAEISYNTASGQLTVKNCKVVIVQATESITLDTPTVKATKNVVIGGNLSVKGTTSSQ
                     GAISTQGAVTAKGDVSGAGISLGSHHHIEQGDGRPTSGAKP"
     gene            13883..14218
                     /locus_tag="PXD69_001599"
     CDS             13883..14218
                     /locus_tag="PXD69_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL6283792.1"
                     /translation="MNRETGEQLEDEVEHIKQSIKDILLTAKGSRVMRRTYGSNLYKL
                     TDKPIAASLIMQLSAACVMALQQWEPRIAITRFKVEFAEDNYNKLICTLDFTLKHRKI
                     SIKGMRFTL"
     gene            14215..15132
                     /locus_tag="PXD69_001600"
     CDS             14215..15132
                     /locus_tag="PXD69_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HDL6283793.1"
                     /translation="MSEIVDLSKLPAPKVLEELDYETLLAERKAKFLSLYPESERAVM
                     AARLALESEPITKLLQENCYLQLLERQRINSAAQATMLAYATGTDLDVIAANFNVERL
                     VVQAEDLTASPPIVEELEPDDDFRQRVQLKIESVSVAGPRKAYTFHALSANGKIADVS
                     VISPQPAYVTVTLLSRDGNGAVASEIINAAKIALNDEEVRPIADRVTVQGASIVEYEI
                     NAVLHLYRGPEKEPILKAAKANLEAYINQTKRIGRDVTHSGIHAALHVAGVQNVEILQ
                     PRTDLVLTPYQAGYCVNYTLNVEVSDEYS"
     gene            15119..15751
                     /locus_tag="PXD69_001601"
     CDS             15119..15751
                     /locus_tag="PXD69_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDL6283794.1"
                     /translation="MNTVKALLPPGSSLLEKRAAECLQQAVQNPIKFANLINPHKCPV
                     KFLPYLAWALSVDYWEEHWSEELKRETIIRSFEEHRKKGTASAVRRIVESLGYAFEIR
                     EWFAEKRQRQPGTFRVFVELKDKGISEKIYQELERLIEDAKPVSRHITELAVSATSKG
                     KANIFSGAHSGEIITIYPPKKLPVIVIKSKMDLFSATNSGEIITIYPNKR"
     gene            15754..>16292
                     /locus_tag="PXD69_001602"
     CDS             15754..>16292
                     /locus_tag="PXD69_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015981653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283795.1"
                     /translation="MEQKYKTILTHHGERVIVEALANKIPVPLKEMAIGDGNGSSITP
                     SASQTTLVREVYRAEITDLLEDPQNRHQMIAELLIPENVGGFIVREIGLFDEQGGLVA
                     VANCPENYKPVLEQGSGKVQYYRMILQVSSSDAVTLSINNNIVYATRTEFNEFVNNLS
                     SPDGYKHIGRCKSVAELRT"
BASE COUNT         5185 a         3377 c         3629 g         4101 t
ORIGIN      
        1 tcattattta tcaataagtt aaaatctata atgtgcagta tatgtatatg caattaaaga
       61 ataacgattt ttcctgacaa gcaatatttt tgcgttgagg tgcgtaaaat tgcgtaaaaa
      121 gatcgagttt ttaagatcgc tttgcgatta tatggggctt gtagggatcg cctttttgca
      181 tttgcgtata aatcgacaaa ttaagtgtgc gggcgaggtg agggatagac cgcgcggggt
      241 tggaggtggt gaagtcgttg aaaaataaag gaaaaattat tttttaagtg tattttattt
      301 gttgttttga tataataaat tgccgaaata tataatctaa tcaggcaaaa cttttgcttt
      361 atatattaaa aaagccccaa tctaggagct gtattgtcag tttgtaaaga tctgttttat
      421 tgtgtccgct gtaacaattt agacggttta aatttgataa cctcttgacc taaccactga
      481 ttaaactctt tcaatcgctc ttgcaatggc tcaatctcgg tgataaaaaa cacctcggca
      541 gcatcagcca cgttgccaaa accgccggtg ttatttggga taatccccat cagttgtggt
      601 ggcacacggt gagcagctaa cacatcatca cggctcacgt tcttgatatt aaaaaactca
      661 tcttttgccg acacatcagc aatcggaata atctgtattc catctttctt gccgtttggt
      721 gcgtggacga acaagttttt aaaattcccc accccttttg actgcttgag ctgctggcga
      781 atattttcaa catcttcttg tttttgtgac gcatcgctca tataaaacac aaagccggcg
      841 tgagctccat ttaaaaaata cttacggcga aacagagtag cactctcatt taaccacgca
      901 gattgcaggg ccgaaagata ttgtggcaag ccgtaaatat cttgattaat atcaggctca
      961 agcaagtgat agattgagcc tttggcaaat tcgtgttctt ggtgatcgaa tcgttgtggc
     1021 acatagtaaa attgaccagc ctctaaaccc tttcgcacat attttgccaa aggtgattcg
     1081 attcgctgta cctgcccaag gcgatttcgc accacctcaa aataggcgtt gccaaatact
     1141 aaataatctt taacaaacga tgacaaatca cggcgtgata aataacggct atcaacctcg
     1201 caagtggaaa gcaaaatatt tgctttggtg atgatcgcac tttcgtggtg tgttgatgac
     1261 cttaacgatt tcgccaagcc atcaaagctc atcggtgggt tataccattt ctcatacatc
     1321 gccgaacact ccaaataatt gagaatatcg gcacggtcta acaccggaat cgggtcacca
     1381 aaactgaaaa tttcggtttg tgcttgcggt tgtaagcggt cattttgggt taaatttttg
     1441 cgcaattgtt ttttcatttt ttgtcctaat catctaaaaa atctactgtg ccggtcgttt
     1501 cttccagttt cccatcaaac ggctcattaa taaatacctg caagcaagcc cacgcaaggt
     1561 cggcgtggct tgcctcttcc gaacggtctg ccacataagt cacttgccgt ccgctgttgg
     1621 tgatctgttt tttaattgcc ataaaactcg caccaacctc aacagcgtgc attgagtcaa
     1681 attcaaatcg tcctttgctg ataatatcca agccttttag taccatcttg gatttcagct
     1741 ctacgttgta agtaagagcc accgcatctg gtcgttcttt tttgacgatt tcataaacac
     1801 cgacaccaag ccctgtggta tcaatcgcca gtctggtcac gttatatttt gcacaaatag
     1861 cgacaatttc tgccgcttgt tcggcaaaat cagccccttt aaaagtgcga tactctaata
     1921 gtcggaattt cccgccgtcc actttcggcg gagcgattac caccaacgcc gagcggtcgc
     1981 cggtgtaaga cgggtcatac ccaacccata cctctttatt gccgaatggg cgttggtagc
     2041 cgtccgtgaa tacataatct cgccacacct ccatcgagtc cacaaggcaa cgttgcatca
     2101 tcgtgaactt gaacacagac tggttatcat caataaactc acacataaag agctgctcga
     2161 actcatcggg cgagttttcc agtttgagtt gctcaatatc aaacaggtta cagccacctg
     2221 cctcggcatc gtagatattc acgatttgtc gccattggcc gtctccgcat tttttgccgt
     2281 ttttcaagtt ggcgtgagaa atatcaattt ccacctgttc cgctttcgga cgtttgcggt
     2341 taaacagctt gcccgaccaa agcagatagg cggaatgggt aatgctcgaa ggggtagaaa
     2401 aataagtaat ccgatattgt ttttggctcg ccatacccgc tgccactttg cggatttcct
     2461 caaagcggtt tacccaaaag atttcatcaa aatagagatt gccgtggtaa gactgtgccg
     2521 ttttcgagtt tgtacccaag aaaattagtt gagactcgtt cggcaaggta atggtttcgc
     2581 cttttagctc cacatcggca acccgtttgg cgtatgccac aatataggct ctaaattgca
     2641 atgcctgttt tttcgaggcg gaaataaaaa tctgatttct accggttact aacgcatcaa
     2701 ctaacgcctc gtgagcaaaa taataagtcg ctccaatttg acgactttta agaatattgc
     2761 ggattcgatg agtcagccca gcttcgtgcc attttttctg ataatggaac attccgtcta
     2821 aaaagccgtt tatcaacagt tcggcttgct cttcggaaat ggcattttgc tcgggctttt
     2881 tgcggtcgcc tttattacgg tttttaatat ttgggttgag gtcggcttca ttacctccgc
     2941 cgttagaata ttttttgatt cgtgctgtac tttccaacaa ccgacgtaaa gcatccattt
     3001 ctttgtagtc gttattgttt ttgctctctt tcataatcag caaattcagc cgtgattcca
     3061 gtgtggcttc cacacgtcca acggggctga tttcgtccca tttctctcgc tttttccaac
     3121 ttgcaatggt agagacggga atatttagct gacgagaaat ttcggtcacg gtgtaacctg
     3181 cccaatactt tgattgagcc tctcgtttat cgtgtagagg gttggcagcc aacacctcgt
     3241 attcagtgat tgtattttca ttttccatag gtgcgattat caaaaatcca ccttgtttaa
     3301 gcatttgctt gaggctgtga aacccgattt aacacgtacc acacattgaa accgccggca
     3361 caaaacaaga tcataaatcc gatttttacc cctccccttt agagcaagga aaaacagatg
     3421 acaacaaaat ccaaatggtt tgtggtagca acggaaggag caactacaga tggacgcgaa
     3481 attagtcgtg aatggctcac gcagattgaa gaaaattacg acccgaaaaa taactatggt
     3541 gctcgtatta accttgagca tttccgctgg cgttggtttg agaaagatga cccgcattct
     3601 tacagctatg gcgatgtgtt agcggttaaa acagaagaac gtgaagacgg caaattacag
     3661 ttactggcag aaatcgcccc aaccgaagcc ttagtgaagt tagtcaaaga caagcagaaa
     3721 gtttatacct ctgtggaaat tgaccttaat tttgcggaca caggcgaggc gtatttagtt
     3781 ggtttggcgg tgactgatac accggcaagc ctcggcacgg aatacctcac attttgtgcc
     3841 ggtgcaaccc ataacccact agcagaccgc aagcaaaagc cggaaaacct tgtgagtgag
     3901 gcagtagagg cgaatttaga atttactgct gaacctgaaa aaggtgcgtg gctggagaaa
     3961 tttaaggcga tgtttaccaa agccaaaacc gacaatgacg gcaaatttgc cgaacacgaa
     4021 aaggcaatgg aactgttagc tgagcaattt agcaaagttt cgacagaaaa cgaccgcttg
     4081 caaactgaac taagcacatt gcaaatcgaa tttaccgaat tgcaaaaaca agcgggcgaa
     4141 tttgccgaaa aatttgcaaa actggaacaa gaaccgtctg ccaattacac cccacgccca
     4201 aaagccactg gtgcgaaagc aggtgatgta caaaccgatt tttaattgag gatcacgaat
     4261 gaaagattta acccttgaaa aatataacgc ctaccttgca cgccaagctg aattaaacaa
     4321 cttgccgttt aatgcattgg caaccggcat taaattcaca gtgcaaccat cggtacagca
     4381 aaagctgtat gaaaaggtgc gtgaaagctc tgatttctta aaatctatca gctttgtgtt
     4441 tgttgatgag caaaccggtg aaaccttagg tttagattca gctcacaccg tggccagcac
     4501 caccgatacc agcggtgacg gtgaacgcaa aaccacctct attgcgaagt tggtaaaaca
     4561 aacctaccac tgccaacaaa tcaattttga cacccatatc aattataaac agttggatat
     4621 gtgggcgaaa ttccctgatt ttcagcaaaa agtggcgaat gttgcggcaa aacaacgcaa
     4681 acgtgactta attatgatcg gctttaacgg cacaagtcgt gcggcaacca gtgatcgcaa
     4741 cagcaacccg ttattgcaag atgtggcaaa aggctggttg cagaaaatgc gtgaagatgc
     4801 caaagagcgt gtaatgaatg gcgaaagcac agacaaccaa gttttagtcg gcaaaggtca
     4861 agagtatgcc aatcttgacg cactcgtaat ggacgccacc gaagaactta ttgatgaatg
     4921 gcatcgtgat gacaccgatt tagtggtgat taccggtcgc aagttgcttg cggataaata
     4981 tttcccgatt gtgaatcagc aaaacgcacc aaccgaagaa cttgccgctg atattgtgat
     5041 ctcacaaaaa cgcattgggg gcttaaaagc ggtgcgtgtg ccgttcttcc cggcgaatgc
     5101 gattttaatc actaagctgg aaaatttagc catctatgtg caagagggga caacccgcaa
     5161 gcatattgag aacgtgccga aaaaagaccg tattgaaacc tacgaatcag aaaatatcga
     5221 ctacgttgtc gaagattatg gctgtgcggc attaatcgaa aacattacac tcaaagataa
     5281 agagtaaggt ggaactatgc gaatgagtcc ggctcgggct cattttttgc ggaaaaccgc
     5341 agaaagtgag tctgcaaccc caaaccgaga aaaccttgaa ggcttacaag gctatgactt
     5401 agttttagcc caacttaaag cccatcaacg ccaattaaag aaaatccagt cgattgagcg
     5461 aaagattgag tttaaacgca acaattttga gcaataccga ccttgggtgg aaggctccct
     5521 tgccaaaggc tccggtgtgc aagacacggt tatcaccaca atgctgattt ggtcgattga
     5581 tattggcgat tacccaaccg cccttgcgat tgctcaatac gttttaatgc acgatttggc
     5641 aatgccggag cagtttgaac gcacaccggc aaccgccttg gttgaagagc ttgcagaggc
     5701 ggcaaagaaa gcccgagacc aaaaacagcc gtttgaggca gccgtgctga aacaggcaaa
     5761 cgacctcacc gctgaatttg atatgcccga cccagtgcga gccaaattac tgcgtgagct
     5821 aggcgagcta atccaagagg cagagccaca aaccgccctt gaacactatc aaagagcgat
     5881 agccctcgac cctcaatgcg gtgcaaaagg cttgcgagac aagttagaaa agcaacttgc
     5941 caaacaagcc gaagagccga aaccagcaga agaacagaat gagtaggcga aagccgaaat
     6001 agagcgtatc cacgccagcc aaggggcgga ttttaaaggg tgatttattc attttgcacc
     6061 cttttaaaat ccccacccct taccttacgg aaaccttatg gaacaacgca atcacgttat
     6121 tagtatcccg aaagtgaatg gctatgaatc cagcaaaaat gcgatcaagc ccaccgcaga
     6181 atctgatgaa actatcacca ataatggctt ttttccgaac attgagctac tggaggtgcg
     6241 aaatgcaatg cggattgatg gcacggtcat taatgagcgg ctaaaacaag cggtgattga
     6301 ggcaatggca acagtcaatg ccgacttaaa agcctatcgc ctcaatgcag agcaagcaca
     6361 aaaagcgaac ttgcaagcct gtgatgatga gcaaatcaac ggcgaaagcg tgctggttta
     6421 caaatataaa cgagcggtct attgccttgc agtagcgaac ctttacgaac gctaccgcag
     6481 ttatgacagc accaaagacg gccacgacaa agccgaagag ctagaaagta ccgccggtga
     6541 tttgaaacga gattaccact ttgccgtgcg tgatattttg ggcgaaaacc gaatgattag
     6601 tgaattgata tgaacacctt gattgcacgc caagacgaca ccttagacga gctgatcttt
     6661 cggcactacg ggcaaacggc aggcttagtc gagcaagcct tagaatataa ccccgaactg
     6721 gctcatttgc cacgtttgcc gatcggcact gtagttacaa tgccggatat tgagagccgt
     6781 tttgcaacgg tggcgaaatc cagcgtgcaa ctttgggatt aaaaaatatg cacaaaactg
     6841 aacaagcctc ctattttggg gcaatttttg gcttttttgg tagcctcacc ctatctgatt
     6901 ggggggtggt agtgagtatt ctggtagcta ttttaacctt attacttaat tgggcatacc
     6961 gagccaaaga atacaaactg aaagagcgag aatttgagct aaagctacaa aaccaaggga
     7021 aaaagaatga gtaaaagtgt aaaagttggc gtatttgtct gctccgttgc agctattatc
     7081 gggacggtaa agcaatatta cagctccgaa atccgcacca gcgaaacagg cttagccatt
     7141 atcggcaatg cggagggttg cagacgtgat ccgtataaat gccctgccga tgtaatcacg
     7201 gttggcattg gctcaaccga ggcaagcggt gagaaaatta atgtcaatca caaatacacc
     7261 gataaagaga ttgccgagcg ttggataaaa gatcttaaaa tagctgaaag gtgtatcaat
     7321 cgttatttta atggcgacaa aatgaacgaa aatcagtttt cggcgatggt atcagcagca
     7381 tttaatatgg gatgttacaa ccttagattt tatccaaatg aaaatggtaa atacattcag
     7441 acaacaatcc ataaatatgc tatggctaag gattttaaag cgatgtgtaa taggatacct
     7501 gattttaacc gctcgggagg taaagtgcta agaggtttga aaatccgccg agaaaaagaa
     7561 aaagccctgt gtctcgggca ggaggttaaa tgattgtcaa actctgccaa atgaccaata
     7621 agcatttcag cccgctaatg attgtgctgg tgctagttgg cgtattagcc aatttcgtgc
     7681 agtttcgcca aaacgaaagc ctgaaagcag acttacaggc acgcaccacg caaaaccaac
     7741 tgattcaagc cgataaccgc aatttagcca atcagcttga aaacagccaa atacagcttg
     7801 aggcgtatca aaaacaggtg gacgacctca atcagaaagt gttagccaaa atgaaacaag
     7861 cggagcaacg aagtaatgaa atccttaacg aactggaaaa gcataaaaag tgggctgatt
     7921 ctgccgtgcc tcctagcgtt ggcaagctgc tcaaccaacg aaagcgtgcg gtatcacacc
     7981 ctcaaatcga acccgataat ctgtccgaaa aggctggagt gccaaacacc ggcaaccgag
     8041 attaacacca acggtgatct tgtcaaagca ctagacaaaa gactcaacac cattgaggta
     8101 tgccaagtca tcatcgaatc gttcgagcat tgcatcgagc aatacaacaa aatcaaccaa
     8161 ggcgagtgat cgcctttttt aataaggacg actatgtcag accaaatcga ccgagccaac
     8221 gaattagccg aaaaagccag agaggcggca cttgcaaaaa ttctgcaaaa tcagaccgct
     8281 tgcaccagcc tttttgagtg tgaggattgc ggagagccaa tccccgaaaa acgccgagaa
     8341 atggttattg gttgcacccg ttgcattgag tgccaaacca tttacgagca taagcaaaaa
     8401 ggctaccgca gatgattaaa cctgatcgct tgcgagccgt gctcacacaa accattgata
     8461 tattccaagc taaccccgaa aagctgattt tgcaatatga caaaggcaaa attaaaagca
     8521 aagggagcca aagccattcg tttgaatacc actacgattt agagctaatc gtggtggatt
     8581 ttccgtatca ccccgacgtg ttgtttgtgc cagtgctaaa ttttgtgcga aatgaacaat
     8641 gggagctact gcaaaacccg gaactacaag acaaaatcga atttgaaatc gaccacaaca
     8701 atcacgagag ctacgatatt tatatccgcc tcccgcttac cgagcgggtg atcgtgaaag
     8761 agcaagacgg acacctaact gcaacccacg ccgatgaacc gaaccttgcc gatgtttcgc
     8821 catttacccg tttaaccgaa tatgaggttt acctcaaaga cgagctgatt tatcagtggg
     8881 cagagccaaa tgagtgaacc gatcgaacaa gtaaaaaccg cctttgatag cttactgaat
     8941 aatatcagca aacctcgcag acggttgatg tatcaacaaa tcgggcgaga gcttgcccga
     9001 agccaacgca gacggattaa agcacaacaa aacccagacg gctcggcata cgagccacgc
     9061 aaaaagccga agaaaggggt aaaaagcaaa attaaatcgg gcaagatgtt tgacaaaatt
     9121 acccagccac gttttatgcg gctacgcctt gaaagcgaag gtgtcagctt aggttatgag
     9181 ggtggtgatg cggtcatcgc ccgaatccac caacaaggct taatcggacg agtgcggaaa
     9241 gattgggatt taaaagtgaa atatgccagc cgtgagttgc taggttttac tgatgacgat
     9301 ctgcagatga ttgaggatta tatgattaat attttggctg gtagctaaat gatgaataga
     9361 aacttttgca aaaaagcggt caattttgac cgcttgagtt attgattaac gctttgtcta
     9421 tctgaatgat accaacaaag aaaccctaaa atagctgaaa aaatcaatgc tatcaaaata
     9481 aaagtattga gtggtaacaa tacataaagt gagatcagaa taacgataat agagagccca
     9541 accatatttg ccaataatga aagcaggctt aaaaatactg ttgtaactac accaaaaatg
     9601 gcagcaaagg ttgtaaaacc tattgccaat aatgcaccga aaccaattaa cccaagtaag
     9661 ataaataaga tttccataga ttttccctta gccatactac aattaaggtt ataatatgag
     9721 caataattta aaaattcaag tagttctttc tgcgttagat aaattaaccg caccatttaa
     9781 gagtgtggta aaacagacgg agaaattatc tcaatcttta aaagtacaga gagatgaatt
     9841 aaaagcattg gaaaaaacac aaagtaaaat gcaatcattt aaaaaaatgg acgatagcat
     9901 taagaaatcc aatgaaacta tactcaaaca gacaaagcat ttagataatc tcaaaaataa
     9961 aatcagccaa atgaaaaatg aacgaattga gctgaaagtg aaaatggatg cgaaaaaaag
    10021 ggaatttcaa caaattacga aaggtggttc agcttggagt gcaagagccg catttttaga
    10081 taaagatttt gaaaaaatgc aaagagaata tgaaaaactc ggtgcatcta tttcaagtgt
    10141 cagccgaaaa agaacagaag aaaatcgggc attaaaggat tctcgccatc aacaagctaa
    10201 gcaactttta tattttcgta gtttaagacg tgaattgaga gcaagcggca ttaatattaa
    10261 agcttttgct caaagcgaaa ccaacttaac agacaagatt gcaaaagcaa atcaattaat
    10321 cgaccaacaa aaagcaaaat tagaaaaact aaatgcggtt aaagctcgaa atgaaaaata
    10381 ttgggcaact gtcgaaaagg taaaaaatac cagcgaacgt ttgcataatt taggacaacg
    10441 ctcaatgatt agtggtgcgg caatttctgc ccctgttgtt gggctaggga aaggggttgt
    10501 cggaatggct caaacagcgg gtaaatttga acaatttaat gctattttag aggtaaccga
    10561 gggaagtgct gaaaaagcca agcaaagttt tgattgggtt aaacaatttg cagtagatac
    10621 cccctcaaac cttgatgaag caatggaagc ctttgtaaag ttaagagcat acggtcttga
    10681 tcctaccaat ggcttactac aaacattagg tgatacaggt gctgcaatgg gtaagcctgt
    10741 aatgcaagca gttgaggcaa tagcagatgc tttaacgggt gagaatgaac gcttaaaaga
    10801 atttggtatt aaaggaagtg tagttaaagg tacaaatatt attgagtatg cctacactga
    10861 taaattaggc aaacaacaag tcgcaaaagt aaacaaaaat aaccgaaaag aaattgagca
    10921 aaccctaacc cgtattttta acgaaaaata tgctggagca atggaaaaac aagctaaaac
    10981 gctagttggt atttgggcaa aaattgaaga ttattggaca aatttccaaa tgcaagtgat
    11041 ggaatcggga gcatttgact ggattaaaaa taaattgcaa tgggtgttag acagtttaga
    11101 taaaatggct gaaaatggcg agttgcaaaa atgggctgaa gatgtcggag ccgttattca
    11161 agaaacagta caaggcttat gggcttttgg tgaaaaaatt attgaagtgg ttaaatggtt
    11221 agcgagcttg gcacgggaga ataaagggct aattgcaaca ttcgttaaat ggtctgctat
    11281 tcttggctct agtttaacgg tgctaggagc ttttgcagtg gtggcaagtt ttgcattata
    11341 tcctgtagca agattggctc ttggtatcgg caaatttaca ggtgcaagca ccttattaaa
    11401 taaggcatta tttgatagta atgataaatt ccgattattc aataaatcac tttattcatc
    11461 aggcactacg gctgcttttg ttaaatcaaa atttaatcag ttagcaactt taccaaatgt
    11521 gctgggaagt agttttaata aattaggcgg tggcatcaaa atgctaattc cacagcttaa
    11581 aacaaaagta ttttggctca atatgctaaa aggtatttta ggcaagttgt ggagtgcaat
    11641 ccgttttatt ttctcaccgt tgaaattatt acttggtatt ttctcgccga ttggcttagc
    11701 gattacagct atttcggtag caggggtagc gttatataga aattgggaga aggtcagagc
    11761 cttttttgga ggctttttgc aaggattatc taaaggtctt gcaccagtat tagagagatt
    11821 taaaccttta ggaaaactat ttgaaactat atcaaactgg gttaaatcta cgtttaagtg
    11881 gttatccgat ttattaaccc cagcggataa aacatcggaa agtttagata aagcgagttc
    11941 tgcaggagaa aaattcgggc ttgcattggc tggtgcaata gacttggtaa catcacctgt
    12001 tcagtggcta gtcgatcagt ttaagtggat ttctgaaaat atgccgagtt gggacactat
    12061 tggtgagggt gtaaaaaagg cagctactgc aattgttccc accgagcacg ccaagcagat
    12121 tactaaaacg gcagaaatgt caaacaatat gtatgacccc aattatactc caccacaact
    12181 tgagcaaaaa tggattggtg gcttggttgg taacggtaaa ggaagaggtt ttgccacagg
    12241 cggctacacc ggcaatggtg gcaaatatga gcctgccggt attgtgcata agggcgagta
    12301 tgtaatgacc aaagaggcaa ctgcacgctt gggtgtggca aatcttaacc ggttaaatta
    12361 tggcaaagtt gctgggctaa ctgcacttgc gtcaagtgtt gcgtttgctc aaccaatgcc
    12421 tgcggtcaaa atcgacagca gaccaccgct gacggcaagc caaccaagcc caacagttgc
    12481 accggtgtcg caaaatatcc atatcaccat caacgccacc ggtgggcaag acccacaagc
    12541 aatcgcccga ctggttgcaa tggagttgga aaaacaacaa cgccaagcac aagcaagagc
    12601 aagatcgtct ttgagagaca ggggctaatt tgacaaagta gaatgaaaag cggacaatgc
    12661 tctaaattgt ccgcttttta taggagcaaa tgatgtttaa agaaaaagga tatgatgaat
    12721 ttgtgaatga atgtgtgcga aaaggtagag aagaacacaa agctggttta ggatttacgc
    12781 tagagcaatc tcgcttacat atcaaaaaaa ccattgagca aaaatcacaa gagctaaacg
    12841 aatttcagcg tgaagtggtt tatggctaaa attaccatta aaccacaagc attgagtcaa
    12901 tttgacgaga ttgtaaaaag tgttatcgaa tttaccggtt ttgaaacgag tggtattcga
    12961 ttacaaagtg atatttttga caaaatagag caaattgcat ttatgccact ctctggaaga
    13021 gcaagagaag atgggacaag agaaactttc gtcagacgtt atcgtattgt gtacgattac
    13081 gataggcagg cagatgaagt aattatctta gctatcattc acagtagccg actttaccca
    13141 cgcccataat cagtaagcga cctaatcggt cgctttttct ttgcctgtta aaacccattt
    13201 cacacctcgc atttataccc aaagcctttc gccttttgca aaatatcctc attttttaac
    13261 cgcttgtaat tgtaaaaatg agtgagccaa accacgccga acaaatccgc cgtttagaca
    13321 atattatccg acttggcact attgccgagg tggatttaac cacagcgact gcacgggtca
    13381 attcgggcgg tattacgacc gatttcttac cgtggctgac ttttcgtgcc ggtacatcgc
    13441 aaacgtggtc agctccaaca gttggcgagc aatgcgtggt gttaagcgtg agtggtgaat
    13501 ttaccacagg cgtgatctta tttgggattt acacccaaaa cgccccgagc caatccgccg
    13561 atgagcatct attccgcttt tcggacggtg cagaaatcag ctacaacacc gcaagcggtc
    13621 aattaaccgt aaaaaattgc aaagtggtga ttgtgcaggc gacagaatct atcacgctcg
    13681 acacgcccac ggttaaggcc acaaaaaatg tcgtgattgg gggcaaccta tccgtgaaag
    13741 gcacaacctc atcgcaaggt gcaatcagca cacaaggggc ggtaacagca aaaggcgatg
    13801 tatcaggggc gggaatcagt ttaggcagcc accatcacat tgagcaaggt gacggcagac
    13861 caactagcgg agcaaaacca taatgaaccg agaaacaggc gaacagcttg aagacgaagt
    13921 agagcatatc aagcagtcta tcaaagatat tttgctgacg gcaaaaggca gtcgggtaat
    13981 gcggcgaacc tatggcagta atctctacaa gctaactgat aaaccgattg ccgcaagtct
    14041 gattatgcaa ctctccgctg cgtgcgtgat ggcgttgcag caatgggagc cacgtatagc
    14101 gatcacccga tttaaagtgg aatttgccga agataactac aataagctga tttgcacctt
    14161 agattttacc cttaagcacc gaaaaatcag catcaaagga atgcgtttta cactatgagc
    14221 gaaattgtcg atttatccaa actccccgcc ccgaaagtac tggaagaatt ggactatgaa
    14281 accttactgg cagagcggaa agccaagttt ttatccctct acccagaaag cgaacgagcg
    14341 gtaatggctg cacggttagc gttggagtct gagcctatca ccaagttact acaagaaaat
    14401 tgctatttgc agctactcga acgccaacgc attaatagtg cggctcaagc cacaatgctt
    14461 gcttatgcta ccggtacgga tttagatgtc atcgcagcca actttaatgt tgagcggctt
    14521 gtagtgcaag ctgaagactt aactgcaagc ccgcctatcg tcgaagagtt agagcctgat
    14581 gatgatttcc gtcagcgtgt gcagttaaaa attgaaagtg tttcggttgc cggtccacgg
    14641 aaggcttaca cctttcacgc cctgtctgct aacggaaaaa ttgccgatgt gtccgtcata
    14701 tcaccacagc cagcttatgt aacggtaacg ctgctttctc gtgatggcaa cggagccgta
    14761 gcctcagaaa tcatcaatgc ggccaaaatt gctctcaatg atgaagaggt tagaccgatt
    14821 gccgatagag taaccgtgca aggggcaagc attgtggaat atgaaattaa tgcggtgttg
    14881 catctctacc gtggacctga gaaagagcct attttaaaag cggcaaaagc taacttagag
    14941 gcttacatca accaaacaaa acgcattgga cgagatgtga ctcactcagg tatccacgcc
    15001 gccttgcacg ttgccggtgt gcaaaatgtg gaaattttgc agccgagaac tgatttggtg
    15061 ctgacacctt accaagccgg ttattgtgtc aattacacgc taaatgttga ggtgagcgat
    15121 gaatacagtt aaagcattat tgccacccgg ttcatcactt ttggaaaaac gagctgccga
    15181 atgtttgcaa caagcggtac aaaatccgat taaatttgca aatttgatta atccacacaa
    15241 atgccccgtg aaatttttgc cctatcttgc gtgggcctta tcggtggatt attgggaaga
    15301 gcattggagt gaagaattaa aaagagaaac cattattcga tcttttgaag aacaccgaaa
    15361 gaaaggcaca gcaagtgcag tgcgaagaat tgtggaatct ctcggctatg cttttgaaat
    15421 ccgtgagtgg tttgcggaaa aacggcaacg gcagcccggg acgtttaggg tttttgttga
    15481 gttaaaagat aaagggatta gcgaaaaaat ctaccaagaa ttagaaaggt tgattgaaga
    15541 tgcaaaaccg gtatcaaggc acatcacaga attagcagta tcagccacct caaaaggcaa
    15601 agcaaatatt tttagtggag cacacagtgg cgaaattatt acgatttatc cacctaaaaa
    15661 gctccctgtt attgtcatta aaagcaaaat ggatttattt agtgcaacaa acagtggcga
    15721 aattattacg atttatccta ataagaggta aaaatggaac aaaaatataa aacaatatta
    15781 acccatcacg gtgagcgagt gatcgttgag gctcttgcaa ataagatacc agtgccactt
    15841 aaggaaatgg ctataggaga tggtaacggg tcatcaataa ctccaagtgc atctcaaacc
    15901 acacttgtaa gagaagttta tcgtgcggaa attacagatt tgctagaaga cccgcaaaat
    15961 cgccatcaga tgattgctga attactaatc ccagaaaatg taggtggatt tattgtccga
    16021 gaaatagggt tatttgatga acaaggtggt ttggttgctg tagcaaattg ccctgaaaat
    16081 tataagcctg tattagaaca aggcagtggt aaagtccaat attaccgaat gattttacaa
    16141 gttagtagta gtgatgcggt caccttatcg attaacaata atattgttta cgccacaaga
    16201 actgagttta acgaatttgt aaataacttg agtagtcctg atggctataa acacatcgga
    16261 cgctgcaaat ctgtagcaga actccgcact at
//
LOCUS       DANLXO010000060        16286 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.060, whole genome shotgun sequence.
ACCESSION   DANLXO010000060 DANLXO010000000
VERSION     DANLXO010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16286
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.060"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..519)
                     /locus_tag="PXD69_001603"
     CDS             complement(<1..519)
                     /locus_tag="PXD69_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6283796.1"
                     /translation="MLDSLKEVNQKLDKKADKVGGGTKEDALVTLDTLIASGTVKAET
                     AMSLLPTLQKGAVATGASSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGSFEL
                     AYMASWLPQQMAAAKQAGLSSIEGFERLLIANQQARVTAGTSDEAGNNLVNLLGKITA
                     KETNERFKNIEYK"
     gene            618..869
                     /locus_tag="PXD69_001604"
     CDS             618..869
                     /locus_tag="PXD69_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6283797.1"
                     /translation="MAPTISDGDQMLVDFSKKEARGDDKIYLVQNGESVWVKRVRKVW
                     DYVELISDNESYRPIRITADEAQNLQIIGQVVHIGHSLV"
     gene            complement(1065..1265)
                     /locus_tag="PXD69_001605"
     CDS             complement(1065..1265)
                     /locus_tag="PXD69_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL6283798.1"
                     /translation="MQYVLDLTGYACPLPLLMAKKAMNDLKKGDSLEILLNQQSSLTD
                     FELLAKEQGWLCELQAVENVGY"
     gene            complement(1324..1836)
                     /locus_tag="PXD69_001606"
     CDS             complement(1324..1836)
                     /locus_tag="PXD69_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDL6283799.1"
                     /translation="MQQLEPQTFASWAEPIDMLYACHSKVKSFCKQLQILPDYLEKNG
                     VNQAVKNDVQQILNYFNISAPLHHEDEEDDFFPELIKVQPQAQAEVDELERQHVHLHK
                     NWDYLSAQLEDLLAGKRENVDRDLIERFVAGYDVHIAIEEPLFELGREHLAQDKLSAM
                     GKVMADRRKL"
     gene            complement(1849..3003)
                     /gene="tgt"
                     /locus_tag="PXD69_001607"
     CDS             complement(1849..3003)
                     /gene="tgt"
                     /locus_tag="PXD69_001607"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDL6283800.1"
                     /translation="MKYELKTTSGNARRGRLTFNRPKGEFHVETPAFMPVGTYGTVKG
                     MTPEEVKATGAQILLGNTFHLWLRPGQEVMKMHGDLHDFMQWHGPILTDSGGFQVFSL
                     GKLRKIKEEGVTFQNPISGEKIFLSPEKSMEIQYDLGSDIVMIFDECTPYPATFDYAK
                     KSMEMSLRWAKRSRDRFDELENPNALFGIIQGGIYEELRKVSVEKLVEIGFDGYAVGG
                     LAVGEPKEDMHRILEYVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNA
                     RNGHLFVTNGIVKIRNAKYRADTTPLDPECDCYTCKNYTKAYLYHLDKCGEILGARLN
                     TIHNLRYYQRLMAEIRQAIEEDRFDDFVVEFYARIGKEVPPLQSEVKEQK"
     gene            complement(3062..3202)
                     /locus_tag="PXD69_001608"
     CDS             complement(3062..3202)
                     /locus_tag="PXD69_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283801.1"
                     /translation="MKKLLLCVGILVLAACSSTGVGGSIGAGGGSNGVGIGLGVGTDF
                     RF"
     gene            3296..3868
                     /locus_tag="PXD69_001609"
     CDS             3296..3868
                     /locus_tag="PXD69_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1439 domain-containing protein"
                     /protein_id="HDL6283802.1"
                     /translation="MKILRKFAAVCVVSMAMLSANANLLTISEQEINDYLATKLAEKI
                     PLKDKVGIPKLFELDYRLHSLTSQIGRTEEKKVAISGVVDGLLNAKGKKYAASIHLNM
                     DTTPYYDPQKGALFLKDVRLLSWSATPAKYQAELQMFLPVLADGLSSFLNSTPVYTLD
                     ENKTKEAMVKKFGKAIVVENGNIKLETTIF"
     gene            3970..4188
                     /gene="cspD"
                     /locus_tag="PXD69_001610"
     CDS             3970..4188
                     /gene="cspD"
                     /locus_tag="PXD69_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein CspD"
                     /protein_id="HDL6283803.1"
                     /translation="MDIGIVKWFNNVKGFGFITSDVCEGDIFAHFSEIQAEGYRSLKV
                     GQKVQFELVQGERGASASNITPISEKTL"
     gene            4278..5192
                     /locus_tag="PXD69_001611"
     CDS             4278..5192
                     /locus_tag="PXD69_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6283804.1"
                     /translation="MPSSYQLVLINLLYIFGIGLNIVLLRFLSLHFDPLNNNGIRFLV
                     GGFTLLFFILWRFRTSLSQLIKTPKLIAISLFVGLMMSANMYFWLKGVKITNAVTVSI
                     FGVLAMPFGVIIAAIFFQDERERIKSKAFWFGSILTIIGSLGFIWHGKTLSIGEGFIL
                     GSVFLFLSIIIRNIQNLVVKFARELNVLTLSCVTSLTTSLSSLLLSQQAGKFNELFTA
                     PNWLLFSLMVAGIYAIMIGMVLTFHIIQTQGLITYQVLELLMPVSTAIIAYILLDERI
                     SIVQMGFACIVILGSSIALKLVKYPKHY"
     gene            5311..6171
                     /gene="araC"
                     /locus_tag="PXD69_001612"
     CDS             5311..6171
                     /gene="araC"
                     /locus_tag="PXD69_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HDL6283805.1"
                     /translation="MYKNLSLLSPTYPFDLEFIAGLTQCEKGNYLDSIVDRQQGMHGY
                     MLQLTTFGRGSVFDGKHVFTAHRGQLLLFTPNAVQHYHRHPESQYWHYKWVYFQPNPK
                     WNKWLNWSDMEEKIGRITISDDRYFQEISQLFSKIELELKSSKFFKEDIATSLLEYLL
                     MKCISAEKIEVIPVIDQRILTVCDLILTNLAKNESLEAMAEKVFLSPSRLSHLFKQSL
                     GISLVQWRELQRISESKKLLYFSNISISNIAKSLGYEDSLYFSKIFKKHTGLSPSEFR
                     TLERRKDSEM"
     gene            6358..7332
                     /locus_tag="PXD69_001613"
     CDS             6358..7332
                     /locus_tag="PXD69_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL6283806.1"
                     /translation="MKKPTFKHALFSSILALACYGSAFANDVVNISKIDGMPWFNRMA
                     EGVVQAGKDNNINAYQVGPSNTDAPQQVKLIEDLIAKKVSAISIVPNDANALEPVLKK
                     AKQNGIVVLTNESVGQPSADWDIEIIDNAQFAADYVEEVAKAMGGKGGYVIYVGGLTV
                     PQHNLWADLFVKYQKEHYPDMFEVTSRMPVAENINDARRTTIDLVKAHSDLKAVVSFG
                     SQGPIGAGLAVKEKRLKNKLNVFGMMIPSQAANLIKSGDITMGITYDPANAGYALAAV
                     AAKVLKGEKIEDGLEIPTVGKAKVDSEKKLLQFHNVLKVTKENIDKLY"
     gene            7387..8877
                     /locus_tag="PXD69_001614"
     CDS             7387..8877
                     /locus_tag="PXD69_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6283807.1"
                     /translation="MAFISMRHISKTFHGIKALNQVNLSLDYGEALCLAGQNGCGKST
                     LIKILSGVYQPDKGAEIQIGATQYTKLTPQESIDKGIQVIYQDLALFPNLTVAENIAI
                     NLHRKFGWVSQDHIHQVALTAIQSINANLDLNAILEDLPIAQQQLVAICRALAQNARL
                     LIMDEPTASLTAKEVKDLLDVVIKLKSKGISIIFVSHKLQEVMSVSDSVLVLKDGNMV
                     GQYPIREMNEKRLGFLMTGLEIDYKRLDLPDFLQRKTVLEVRNLTLPHQYQEINFSLR
                     EGEIVALTGLLGSGRTELCLSLFGITQPQSGDILLNGEKVIFNTNRDAIAKGIAYVSE
                     DRMHTGLIMAESIHHNIISTIFHKITDKLQIIQSSKAYASSQALIDSLKIKVSDSDLP
                     VNTLSGGNAQRVSIAKWLAIDPKIIILDAPTIGVDIANKEGIFQIIKSLAQQGIAVIF
                     VTDEVEETYYNSHRVIVMKKGRIVDEILPAYSSEKSIAEVIYENQQ"
     gene            8861..9820
                     /locus_tag="PXD69_001615"
     CDS             8861..9820
                     /locus_tag="PXD69_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6283808.1"
                     /translation="MKISNNHILSSTLLILILLLTLFTRDFATIENLYDVVNNYAMLM
                     ILACGLFVVLLSGGIDISFPAITIISQYVMVTLIGKYDVGFAGVFVISSTIGILLGFI
                     NALFVNRLSVPSIIITISTLNIFYGGLLYFTKGVWLYEYPEWFTQEIVFFKQITAEGV
                     EFGLSFQALMAILAVILTGLITNKLTIGRKIYALGGNPDATSRIGFNLLFLHLFAYGY
                     MGFMAGLAGIVQSYTVQSVAPDSLLGYELTVLAAVVLGGASLSGGRGTLLGTVMGVML
                     LAIIQNGLNLMNVSSYWQTIITGIIIILSISATALSQRKKQGA"
     gene            9823..10773
                     /locus_tag="PXD69_001616"
     CDS             9823..10773
                     /locus_tag="PXD69_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6283809.1"
                     /translation="MKSKLDPTIFYLLALFAVAVIAFSIFIPDIFWSVSNFQSMASQI
                     PVLGILTLAMALPMLTGGINLSIIAGMNACSLIIAYFITQYTGISWLFIAILLSLCCA
                     LAIGLLNGTLIAIIRVSPILATLGTMTLINGINILVTNGSTIANFPETMLSINASAFL
                     WIPLPILIFLFLAGLIWFFLEKTAMGKAVYFIGNNEKATYYSGINTKKVLIWVYVISS
                     ILCVFAAILMMSKLNSAKASYGDSYLLISILAAVLGGINPDGGKGKLLGIMLALVLLQ
                     VIESGLNMLGISSYITMILWGSLLLFFIFLQKNRLFRLTQ"
     gene            10786..12381
                     /locus_tag="PXD69_001617"
     CDS             10786..12381
                     /locus_tag="PXD69_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HDL6283810.1"
                     /translation="MQNEKQLIEQGNTVIGIELGSTRIKAVLISSDGTILATGGADWE
                     NRLIDGIWTYHQNEIWEKLQAAYMDLSKTVKEKYHTTIRTAKALGISAMMHGYLPFDK
                     HGNPLVAFRTWRNNITLTSSEKLTALFQYPIPQRWSIAHLHQALLNQEPHLPEIDYLT
                     TLSGYVHWQLTDHKVLGIGDASGMFPIDTELKSYNPTMLAQFDRAIADYRMPWKLEAI
                     LPQVRVAGEQAGKLTEKGAKLLDPTDNLQAGIPLCPPEGDAGTGMIATNCIKEKTGNI
                     SAGTSAFAMIVLEKALSKAYSELDIVTTPAGKLVAMAHANNCTSDINAWVNLFGECLS
                     VFGVNICTEELYEMLFLHALQGDADCGGLLSYGFHSGEHNVGLSEGCPVFLHPTNAHF
                     NLANFMRTHLYTAFGAMKLGMDILINQEKVEISRILGHGGIFKTEGVAQKILSSALNI
                     PLATASTASNGGAWGIALLADFLSVSDRYSLEEYLDNCIFNTTKLNLVQPDKTMSEGY
                     ERFMQRYKQGIPVVEKALFLNTD"
     gene            12611..13813
                     /gene="yedE"
                     /locus_tag="PXD69_001618"
                     /pseudo
     CDS             12611..13813
                     /gene="yedE"
                     /locus_tag="PXD69_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005824242.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
     gene            13849..14118
                     /gene="yedF"
                     /locus_tag="PXD69_001619"
     CDS             13849..14118
                     /gene="yedF"
                     /locus_tag="PXD69_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007241376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDL6283811.1"
                     /translation="MAFTVVQKLDKDPKDITPDYTLDTLGEPCPYPAITMLETMPQLQ
                     KGEILELLSDCSQSINNIPIDTKNHGYTLLSVEQNGTKLRYLIQR"
     gene            14218..14562
                     /locus_tag="PXD69_001620"
     CDS             14218..14562
                     /locus_tag="PXD69_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HDL6283812.1"
                     /translation="MNKYALLAIFWFIIGIYALLFRESTNDIPPFPHFDKVSHFALFF
                     IQIWLSANAFIRSKKGIPYFGLIIFALLYAFTSEWAQATFTSTREGSWLDGLADMLGA
                     SLSLLLVKYCKK"
     gene            complement(14625..15572)
                     /locus_tag="PXD69_001621"
     CDS             complement(14625..15572)
                     /locus_tag="PXD69_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDL6283813.1"
                     /translation="MNRITQILNIKHPIVQAPMSWLTDAHLVASVAEAGGLGFLAPHA
                     GQTTNPTSNEEVLDRMRNEIRKVKALTDKPFGVPFILSYDFSLIPLMVDLFIEERVPV
                     VLDNGWLDPEIYAKFKAAGIKIICRLPNPNLADALKAQALGADILVLTGFDEGGTLPM
                     KEVGSFNVLAEFVGKVDLPIMLAGGIADKKAVQAALTLGAEGVWIGTAFIATEECRAS
                     EKVKNWIVEANANDLLLFRTEPHYYRSLPTGLAKKCFEMSENGATRSEIAKVMNAGTG
                     MRLGMLEGDFDNGYVSVGNGISQINKIKSVKELIDELMA"
     gene            15755..>16286
                     /locus_tag="PXD69_001622"
     CDS             15755..>16286
                     /locus_tag="PXD69_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283814.1"
                     /translation="MSIRWENIKPLQGSQNSAFEELVCQLARQEFKSQGKFTRISAPD
                     GGIEAMCELPDGSVCGWQAKYFLSSFSSSQWQQIEDSFKESLKNYPKLTKYYVCVATD
                     RANANVSGKKSFLTKWEEYTQRWKDFAQSQGREIEFEFWGSFELSDLLSKPENAGKKF
                     FWFNESELSDKWFEQYN"
BASE COUNT         4768 a         3292 c         3164 g         5062 t
ORIGIN      
        1 tttatattca atatttttaa aacgctcatt tgtttcttta gctgtaatct taccaagcag
       61 atttaccaga ttattacctg cctcatcgct tgtaccggca gtgacacgag cctgttggtt
      121 tgcaattaaa agtcgctcaa agccctcaat actactcaaa ccggcttgtt ttgcagctgc
      181 catttgttga ggcaaccaac ttgccatata tgcaagctca aaactacctg cttgcccggc
      241 tgcaacagcc atatccaatg cccgcccaat atcctcttct ttgatgccaa attgttgcat
      301 agaggagatc gcaatttttg ccatatcctc cgagcttgcc cctgttgcca ccgccccttt
      361 ctgcaaagta ggtaatagac tcattgcggt ttcggctttg actgtaccgg aggcaatgag
      421 cgtatcaagc gtaactaacg catcctcttt tgtgccaccc ccaaccttat ccgccttttt
      481 atcaagtttt tggtttactt ctttgagcga gtctaaaata tcgtccagct tttccttaag
      541 agccttattc agacagccta ttaagcctag gcgtaaaagc ccataattgt ggcgtatttt
      601 gggctaatgg cacatcaatg gccccgacta tcagcgatgg tgatcaaatg ttagtggatt
      661 tcagcaaaaa agaagcccgt ggagacgata agatttatct tgtgcaaaat ggtgaaagcg
      721 tttgggtaaa acgtgtaaga aaagtgtggg actacgttga attgattagc gataatgagt
      781 cctaccgccc aatccgaatt acagcagacg aagctcaaaa cttacaaatc atcgggcagg
      841 tagtccacat cggacactct ttagtttaaa acagatttaa aatagtttta aaaccgatca
      901 aacctatgca aaaaatatcg caaaaactgc ccattttttt ctaatcctgc tcattttgtt
      961 ttttgcatag ccccaaccaa acaataacgg cgaacccttg tattcacggg gctcgccgtt
     1021 atttttccgc ccaaattttt ttctttctct ctatgcaaaa aagatcagta ccccacattt
     1081 tcaaccgctt gtagctcaca aagccaacct tgctctttgg caagcagttc aaaatcggta
     1141 aggctactct gctgattgag taaaatttcc aagctatcgc cctttttaag atcgttcatc
     1201 gctttttttg ccattaataa cggcaagggg caggcatagc cggttaaatc taaaacatat
     1261 tgcatagcga aatagggaat aaagaaaaag ggcgaatatt gaaattcgcc caatcacaaa
     1321 agattagagt ttacggcggt ctgccatcac tttgcccata gccgataatt tgtcttgagc
     1381 taaatgctct cgcccaagct caaagagtgg ctcttcaatc gcaatatgca catcataacc
     1441 tgccacaaaa cgctcaatta agtctctatc cacattttca cgtttacctg cgagcagatc
     1501 ttcaagctgt gccgacaaat agtcccaatt tttatgtaaa tgaacgtgct ggcgttccag
     1561 ttcgtctacc tctgcttgag cttgtggttg caccttaata agctcaggga agaaatcatc
     1621 ttcttcatct tcgtgatgta aaggggcaga aatgttgaag tagttcaaaa tctgctgcac
     1681 gtcattcttc actgcttggt ttaccccgtt tttctcaagg taatccggca aaatttgcaa
     1741 ctgtttacag aaacttttta ctttgctgtg gcaagcataa agcatatcaa tcggctctgc
     1801 ccagcttgca aaggtttgtg gttcaagttg ttgcatatac actccttgtt atttctgttc
     1861 ttttacttca gattgtaaag gtggcacttc tttgccaatt cgggcataaa attccactac
     1921 aaaatcatca aaacgatctt cttcgatggc ctggcgaatt tctgccatta ggcgttgata
     1981 gtagcgtaaa ttatgaatgg tgtttagtct tgcccctaaa atctcgccac atttgtctaa
     2041 gtgatataaa taggctttgg tgtagttttt gcaagtgtaa caatcacatt caggatcaag
     2101 cggtgtggtg tctgcacgat atttcgcatt acgaattttt acaatgccgt tggtcacaaa
     2161 taaatgtccg ttacgggcat tgcgggttgg cattacgcag tcaaacatat caataccacg
     2221 gcgaacccct tcgactaaat cttctggctt gcctacaccc attaaatagc gtggtttatc
     2281 tgccggaatt tgcgggcaaa cgtattctaa aatgcggtgc atatcttctt taggttcacc
     2341 taccgccaag ccaccgactg catagccatc aaagccgatt tcaactaatt tttccaccga
     2401 gactttgcga agttcttcat aaataccacc ttgaataatg ccaaataacg cattcgggtt
     2461 ttcaagttca tcaaagcgat cacgagaacg tttcgcccaa cgtagtgaca tttccatcga
     2521 tttttttgca taatcaaagg ttgccggata aggagtacat tcatcaaaaa tcattacaat
     2581 gtctgatcca agatcgtatt ggatctccat tgatttttcc ggcgaaagga aaattttctc
     2641 accgctaatc gggttttgga aagttacgcc ttcttcttta attttacgca gtttacctaa
     2701 gctaaaaact tggaaaccgc cggagtcggt taaaataggg ccgtgccatt gcataaaatc
     2761 gtgcaagtca ccgtgcatct tcatcacttc ttgccccggt cttaaccata aatggaaagt
     2821 gttgcctaat aaaatttgcg cccctgtcgc tttaacttct tcaggagtca ttccttttac
     2881 cgtgccataa gtgccaacag gcataaatgc cggtgtttca acgtgaaatt cgcctttcgg
     2941 gcggttaaaa gttaaacgcc cacgacgagc gttaccactt gttgttttta attcgtactt
     3001 cattttaatc cacaaataaa cagttcgtga aagcggtcaa aaaccaccaa aaatttacca
     3061 attagaatcg aaagtcggtg ccgaccccta agccgattcc aacgccgtta gagccaccac
     3121 cggctccaat actgccaccc acaccggttg atgagcaagc agctaacact aaaatgccaa
     3181 cgcataataa gagttttttc attttttgct gtcctaaacg aaaaagagag tctatgatag
     3241 acccaatgta ttctaacctg tttaatggat taaacctaat tttaaagggt aaattatgaa
     3301 aattttacgt aaattcgctg ctgtatgcgt tgtctcaatg gctatgctct ctgctaacgc
     3361 taatttgctc actattagcg agcaggaaat caacgactat ttagccacca aattagctga
     3421 aaaaattcct ttaaaagata aagtcggtat tcctaaatta tttgaattgg attatcgcct
     3481 gcattcactt accagccaaa ttggcagaac cgaggaaaaa aaagtagcta tttctggcgt
     3541 tgttgatgga cttttaaacg caaaaggcaa gaaatatgct gcctctatcc atttaaatat
     3601 ggataccacg ccttattatg atccacaaaa aggggcatta tttcttaaag atgtcagatt
     3661 gttaagttgg tctgcaacac cggctaaata tcaagcagag ctgcaaatgt ttttgccggt
     3721 gttggctgat ggattaagta gttttttaaa cagtacgcct gtttatactt tagatgaaaa
     3781 taaaacaaaa gaagcaatgg tgaaaaagtt cggcaaagcc attgtagtag aaaatggtaa
     3841 tatcaagcta gaaaccacta ttttttaaat aattttgtga tcttcgtcta atttttacac
     3901 tttgatagtt gagcttttac gcgttttatt tacaatccaa atatcgccat tcattatttg
     3961 gagagttcta tggatatcgg tattgttaaa tggtttaaca atgtaaaagg atttggtttt
     4021 attacatcgg atgtatgtga aggagacatt tttgctcatt tttctgaaat tcaagcagaa
     4081 ggttatcgct ctttaaaagt cggccaaaaa gtacagtttg aattagttca aggagagcga
     4141 ggtgcctcag cctcaaatat cacgcctata agcgaaaaaa cgttataatc cgtcgttaat
     4201 aaaattattg ttataaccat actttattag attttaaagc tcagctttta cagctgagcc
     4261 atttttgctt tttgaatatg ccttcctctt atcaattagt cttaattaac ctactttata
     4321 tcttcggtat tggtctaaat attgtactgc ttaggtttct cagtttgcat tttgacccat
     4381 taaataataa cggtatacgt tttcttgttg gtgggttcac cttattattt ttcattttat
     4441 ggagattccg cacatcgctg tctcagctga ttaaaactcc aaaattgatt gcgatttctc
     4501 tatttgtcgg gttaatgatg tccgcaaata tgtatttttg gctaaaaggg gtcaaaatta
     4561 caaatgctgt taccgtctct atttttgggg tattagctat gccatttggt gtgattattg
     4621 ccgccatatt ctttcaagat gaaagagaac gcattaaaag caaagctttc tggttcggct
     4681 caattttaac gatcatcggt tcactcggat ttatttggca cgggaaaaca ctctcgattg
     4741 gcgaaggatt tattcttggt tctgtgttct tatttttgtc gatcattatc cgtaatatac
     4801 aaaacctagt tgtaaaattt gctcgagaac tgaacgtatt aaccctaagt tgtgtaacat
     4861 ctttaactac ttcactctcg agtctattac ttagccaaca agcaggtaaa tttaatgagc
     4921 tttttactgc accaaactgg ctactattct ctctgatggt tgctggtatt tatgcgatta
     4981 tgatcggaat ggtattaacc tttcacatta tccaaaccca aggactgata acctaccaag
     5041 tattggaact attaatgccg gtttcaacag ccatcattgc ttatatttta ctggacgaac
     5101 gtatttccat tgttcaaatg ggctttgctt gtattgtgat tttaggctca agtatcgcct
     5161 taaagttagt aaaatatcct aagcactatt aggatctttg ctaattaata ttggtaaaat
     5221 tacatttggt ttactaatct gagcgttcat tcattagtaa tgataaacaa gcggttattt
     5281 tttgttattt tttggtaaat actgatagtc atgtataaaa acctttcttt gctttcaccg
     5341 acttatccat ttgaccttga attcatcgcc ggtcttactc aatgtgagaa aggtaactat
     5401 cttgattcta ttgtcgatag gcaacaagga atgcacggtt atatgcttca attaaccact
     5461 tttggtcgtg gttctgtttt tgatggtaag cacgttttta ccgctcatcg agggcagtta
     5521 ctcctcttta cacccaatgc cgttcaacac taccaccgtc acccggaaag ccaatattgg
     5581 cactacaaat gggtctattt tcagccgaat cctaaatgga ataaatggct gaattggtca
     5641 gatatggaag aaaaaatagg acgtatcacc attagcgatg atcgttactt tcaggaaatt
     5701 agccaacttt tcagtaaaat tgaattagaa cttaaatcca gtaaattttt taaagaagat
     5761 attgcaacaa gtttgttgga atacttactt atgaaatgta tttccgccga gaaaattgag
     5821 gttattcctg tcattgatca acgcattttg acagtttgtg atttaatctt aacgaatttg
     5881 gctaaaaatg agagcttaga agcaatggca gaaaaagtat ttttatcgcc atctcgcctc
     5941 tcacatcttt tcaagcaatc gctggggatc agcttagtgc aatggcggga attacaacgc
     6001 atttccgaat ccaaaaaatt gctttatttc tctaacatct ctatctctaa tattgcgaaa
     6061 tccttaggct atgaggattc tctctacttt tccaaaattt tcaaaaagca taccgggctg
     6121 tcaccctctg agtttagaac cttagaacgg cgtaaagaca gtgaaatgtg atcttgatct
     6181 cactttactt tgcatagcag aattttccat atcgataaca aaaagttacc tgtttttctc
     6241 tcattcaaaa gcataagata caaacagctt taatagtgct gtttctatta gagaagggat
     6301 atcaagctct gtgagtgata ttcagtgaaa taacttctta tgtatgaggg aagaacaatg
     6361 aaaaaaccaa cgttcaagca cgcattattt tcaagtattt tagctttagc ctgttacggc
     6421 tcggcatttg ccaatgatgt tgttaatatc tccaaaattg acggtatgcc gtggtttaat
     6481 cgtatggcag agggtgttgt gcaagcaggc aaagataaca atatcaatgc ttatcaagtt
     6541 ggtccatcaa ataccgatgc accacaacaa gtaaagttaa ttgaagattt aattgcgaaa
     6601 aaagttagtg ctatttccat cgtccctaac gatgcaaatg ccttagaacc ggtactgaaa
     6661 aaagcgaaac agaacggtat tgtggtatta accaatgagt cagtcggaca acctagtgcc
     6721 gattgggata ttgaaattat cgataatgca caatttgcag cagactatgt agaagaagta
     6781 gcaaaagcta tgggcggaaa aggcggctat gtgatttatg ttggtggttt aaccgtgcct
     6841 caacataatc tgtgggctga tttattcgtg aaataccaga aagagcatta tccggatatg
     6901 tttgaagtga ccagcagaat gcctgttgcc gaaaatatta atgatgcacg ccgtaccacc
     6961 attgatttag tgaaagccca ttccgatctt aaagcggtcg tttcttttgg ttcacaaggt
     7021 cctattggtg cagggttggc agtgaaagaa aaacgcttaa aaaataaatt aaatgtcttc
     7081 ggaatgatga ttccttccca agcagccaat ttaattaaaa gcggtgatat tacaatggga
     7141 attacctatg acccggccaa tgcaggttat gctttagctg ctgtcgctgc caaagtatta
     7201 aaaggcgaaa aaattgagga tggattagag atcccaacgg tcggtaaagc caaagtagat
     7261 agtgagaaaa aactacttca attccacaat gtgctgaaag tcaccaagga aaatatcgat
     7321 aaattatatt aatttgcttg aaatatgggc tgatagccag cccatatttt ccctcaggag
     7381 gcacttatgg catttatttc gatgcggcat atcagtaaaa cattccacgg cataaaagca
     7441 ttaaatcaag tcaatctctc attagattat ggcgaagcac tttgtcttgc cggtcaaaat
     7501 ggctgtggaa aatcaacctt gatcaaaatt ctttccggcg tttatcaacc ggataaaggg
     7561 gctgaaattc aaattggtgc aacccaatat accaagctga caccacagga atcgattgat
     7621 aaaggtattc aagtgattta tcaagattta gccctcttcc ccaatttaac cgtggcagaa
     7681 aatattgcca ttaacctgca ccgaaaattt ggctgggtga gtcaagatca cattcatcag
     7741 gttgccctca ctgctattca aagcattaat gcaaatctag acctgaatgc aatattagaa
     7801 gatttaccga tcgctcaaca acagttagtc gctatttgtc gagcgttagc acaaaatgcc
     7861 agattattga ttatggacga gccgactgcc tcacttactg caaaagaggt caaagatctg
     7921 ttagatgtcg tcatcaaact taaaagcaaa ggcattagca tcatctttgt cagtcataaa
     7981 ttgcaagaag taatgagtgt ttccgatagc gtattagtgc tgaaagatgg caatatggtt
     8041 gggcaatatc ctatccgtga aatgaatgaa aaacgccttg gtttcctaat gactgggctg
     8101 gaaatcgatt acaagcggtt agatttgccg gattttttgc aaagaaaaac cgtattggaa
     8161 gtccgcaatt taacgctgcc tcatcagtat caagagatta acttttcgct acgagaaggg
     8221 gaaattgttg cccttacagg attgctcggt tcagggcgta ctgagctttg cctaagttta
     8281 ttcggcatta ctcaaccaca atccggcgat attttattaa acggtgaaaa agtgatattt
     8341 aacactaacc gtgatgccat tgccaaaggg attgcttatg tatcggaaga tagaatgcac
     8401 accgggctga ttatggcaga gtcgattcat cacaatatta tttcgactat ttttcacaaa
     8461 atcaccgata aattacagat tattcaatcc tcgaaggctt atgcaagtag ccaagccttg
     8521 attgattcat taaagattaa agtatccgat tcagatttgc ctgttaatac cctttccgga
     8581 gggaacgcac agcgagtttc gattgcaaaa tggctggcaa tcgaccccaa aattattatt
     8641 ttagatgccc cgactattgg ggtcgatatc gccaataaag aagggatctt ccaaattatt
     8701 aaatcattgg ctcagcaagg cattgcagtt atttttgtga ctgatgaagt ggaagagacc
     8761 tactacaaca gccatcgggt aattgtaatg aaaaaaggtc gcattgttga tgaaatcttg
     8821 ccggcatatt ccagtgaaaa atcgattgcg gaggttattt atgaaaatca gcaataatca
     8881 tattctttcc agtacgttac tgattttaat cctattatta accctattta ctcgtgattt
     8941 tgcaactatt gagaaccttt atgatgttgt aaataattac gcaatgttaa tgattttagc
     9001 ttgtggttta tttgtggtat tgctgtctgg cggcattgat atttctttcc ctgctatcac
     9061 tattatttcc caatatgtta tggtcactct gatcggtaaa tatgatgtag gatttgccgg
     9121 cgtttttgtt atttcttcca ccatcggcat attattaggt tttattaatg ctctatttgt
     9181 taatcggctt agtgtccctt ccattattat tacgatctca acactcaata ttttttatgg
     9241 cggactactc tattttacca aaggtgtatg gctttatgag tatcccgaat ggtttaccca
     9301 agaaatcgtg ttctttaaac agataactgc tgagggagtg gaatttggat tatcgtttca
     9361 agcattaatg gctattttgg cggtgatatt aaccggctta attaccaata aactcactat
     9421 tggtcgaaaa atttacgctc ttggtggtaa tccggatgca acctcccgta ttgggtttaa
     9481 tctcttattt ctccatctat ttgcatacgg ttatatgggc tttatggcag gcttggcagg
     9541 catagtgcaa tcttataccg tacaatctgt cgcaccggat tcactactgg gttatgaatt
     9601 aaccgtccta gctgccgttg tattaggtgg tgctagttta tcaggtggta gaggcaccct
     9661 gcttggtaca gtaatgggcg taatgttact ggcgattatt caaaacgggc taaatttaat
     9721 gaatgtatcg tcttactggc aaaccattat taccggtatc atcattatct taagtattag
     9781 tgcaacagcc ttaagtcagc ggaaaaaaca aggagcataa cgatgaaaag taaactggat
     9841 ccaacgattt tctatctctt agcactcttc gcagttgcag ttatcgcctt tagtattttc
     9901 attccggata ttttttggtc tgtcagtaac tttcaatcta tggcatcaca aattccagta
     9961 ttaggtattt taaccctagc aatggcatta ccgatgttaa caggtggaat aaatctttcc
    10021 attattgccg gaatgaatgc ttgctcatta attattgcct actttattac gcaatatacc
    10081 ggtatttctt ggttatttat tgctatttta ttaagccttt gctgtgcctt agccattgga
    10141 ttactcaacg gcacattaat tgccattatt cgtgtttcac caattttggc aaccttaggc
    10201 acaatgactt taattaacgg cattaatatt ctagtcacta acggttcaac cattgcgaac
    10261 tttccggaaa caatgttgag tattaatgct tcagcctttt tatggattcc gctacccatt
    10321 ctaatctttc tctttcttgc tgggctgatt tggtttttct tagaaaaaac tgcaatgggt
    10381 aaagcggttt atttcatcgg caataatgaa aaagccacct attattcggg tattaatacc
    10441 aaaaaagtgc tgatttgggt ttatgttatc tcctcaattc tttgtgtatt tgcagctatt
    10501 ttgatgatgt ctaaactcaa ttctgcaaaa gcctcttatg gtgattccta tttgttgatc
    10561 tccattttag ccgcagtatt gggcggtatt aaccctgatg gaggtaaagg gaaactatta
    10621 gggattatgc tcgccttagt tttattacaa gtgattgaaa gtggcttaaa tatgctcggc
    10681 attagcagtt acattacaat gattttatgg ggaagcttat tgttattctt tatcttcctc
    10741 caaaaaaatc gccttttccg actaacacag taatggtggt agattatgca aaatgaaaaa
    10801 caactcattg aacaaggtaa tactgttatt ggtattgaat tgggctcaac ccgaattaaa
    10861 gcggtgttaa ttagctcaga tgggacgatt ttagcaaccg gtggggcgga ttgggaaaat
    10921 cgactgattg acggtatttg gacctatcat caaaatgaaa tatgggaaaa actacaagct
    10981 gcttatatgg atttaagcaa gacagtcaaa gaaaaatatc acacaaccat tcgcacagcc
    11041 aaagcattgg gaattagtgc gatgatgcac ggctacttac ctttcgataa acacggaaat
    11101 ccgctggttg cctttagaac ttggcgaaac aacattaccc taacctcatc ggaaaaattg
    11161 accgcactct ttcaataccc aattccgcaa cgttggagta ttgctcattt acaccaagca
    11221 ttgcttaacc aagagcctca cttgccggaa attgattacc tgacaaccct ctcaggttat
    11281 gtgcattggc aactgaccga tcacaaagtg ttagggattg gcgatgcttc cggcatgttc
    11341 ccgatagata ctgagttgaa atcctacaat ccaacaatgc tggctcaatt tgatcgagcc
    11401 attgccgact accgtatgcc ttggaaattg gaagcgattt tgccacaagt tcgtgttgct
    11461 ggtgaacaag cgggcaaatt aaccgaaaaa ggtgcaaaat tgttagatcc aaccgataat
    11521 ttgcaagctg gcattccact ttgtccacct gagggtgatg ccggaacagg tatgattgca
    11581 accaactgta tcaaagaaaa aaccggtaat atttctgccg gcacctccgc atttgcaatg
    11641 attgtgttag aaaaagccct atccaaagcc tattcagagc tggatattgt gacgaccccg
    11701 gcaggtaaat tagtggcaat ggctcacgct aataattgca cctctgatat taatgcgtgg
    11761 gtgaatttat tcggcgaatg cttatcggtt tttggcgtaa atatctgcac cgaagaactt
    11821 tatgaaatgt tatttctcca tgccttgcaa ggcgatgcag attgtggagg gctattatcc
    11881 tacggcttcc actccggtga acataatgtc ggtttatccg aaggctgtcc ggttttcttg
    11941 catccaacga atgcccattt taacttagca aactttatgc gaacccatct ctataccgct
    12001 tttggtgcaa tgaaattagg aatggacatt ctcattaacc aagaaaaagt ggaaatttcc
    12061 cgtattctcg gtcacggtgg tatatttaaa acagaaggtg ttgcacaaaa aattctgtct
    12121 tccgcactga atattccatt ggctaccgca agtactgctt caaatggcgg agcttgggga
    12181 attgcattac tggcagactt tctcagcgta tcagaccgtt acagtttaga agaatattta
    12241 gataattgca ttttcaacac caccaaactc aatctggttc aaccggataa aacaatgagt
    12301 gaaggttatg aacgctttat gcaacgttat aagcaaggca ttcctgtggt agaaaaagcg
    12361 ttgtttttaa atacagatta aataattata atttaagtat cacaagcggt tatttttgca
    12421 aaaaacgacc gcttgttatt tacatttgta caaaaaatac ctactataaa gacgcatttg
    12481 taaaatgtgc attgatatat cgcaagtttt gtgtatagga aatgaactaa ttactgtgtc
    12541 aatcagtccc tttcttcatc gttataccct cttgcaaatc cgattaatct atccttagtt
    12601 aaggtgtttt atgttagcga tttggcaaag ttttaaacaa aattatctaa tcaaatattg
    12661 gaatcctgtt gcagcagtga tcgcagctgg tattatttca gcttattatt tcggcattac
    12721 tggcacttat tgggcggtta caggggaatt tacccgttgg ggcggtcatc tgttaaatgc
    12781 tttgggtgtt gatgtttcga actggagcta ttttcaactc atcggcttag acggcaccat
    12841 ctttacccgc attgacggtg tgatgattct cggtatgttt gccggctgtc tttctgccgc
    12901 attatgggcg aacaacgtca aatggcataa tcagccacat aaaaaacgga ttatccaagc
    12961 cttgattggc ggtgcgttag ccggtttcgg agcccgttta gcaatgggct gtaacctcgc
    13021 ctctcttttt accggtattc cgcaattctc cgtccacgct tggtttttca cctttgcgac
    13081 cgccatcggc acttactttg gggtaaaagt gactttatta ccgatgttta gagtgaaatt
    13141 agagctgaaa aaaggggcag caaaaatcaa agaaaacgat ccgaaacaag ctaatcgccg
    13201 tttttgggtt ggtatgctca tttttatcac ttatctttct gcttcccttt atgtaatgca
    13261 atcctcaatc aaacttggtt ttgcaatgct ttgcggctta gcctttggct tattgattga
    13321 acgagcccaa atttgcttta cctccgcttt ccgtgactta tggattaccg gacgggctta
    13381 tatggcaaaa gcaattattt tcggcattat tgccggcaca atcggcgtgt tctcttatat
    13441 tcaattaggt gtttcaccta aaattttgtg ggctggccca aatgccatta tcggcggatt
    13501 attattcgga tttggcattg tgcttgccgg cggctgtgaa accggctgga tgtaccgttc
    13561 aatggaagga caggttcatt ttatgtgggt cggcgtaggc aatgtagtcg gttcaaccct
    13621 gctggcttac tactgaggcg acttagctcc ggtgcttacc cttgattatg aaaaaatcaa
    13681 cctactcaaa gaatttgggc cggttggcgg attattcatc aattatggct tattaattct
    13741 ttgcttaatc gctgtagttt ggtgggaaaa acgcttcctt gccaaagcga aagcaaaatt
    13801 agcaactgcg taatcttttt aacttcaacc aacaagagga aaatgactat ggcattcacc
    13861 gttgtacaaa aactagataa agatccaaaa gacatcacgc ctgattacac cttagatacc
    13921 ttaggcgaac cttgccctta ccctgcgatt acgatgttag aaacaatgcc acagctgcaa
    13981 aaaggagaga tattggaact gttaagcgat tgttcccaat cgattaataa tattccgatt
    14041 gatactaaaa atcacggcta taccctatta agcgtggaac aaaacggcac taaattacgc
    14101 tatttaattc agcgttaatt gcaaaaaatt cgcacaaaac gaccgcttgt cgtaaaatag
    14161 caactattta agagccttgt aacgcaaggc tcttttattc taagaggtaa aagaaaaatg
    14221 aataaatacg ctttacttgc aatattttgg tttattattg gcatttatgc tttacttttt
    14281 cgtgaaagca ctaatgatat accgcctttt ccacattttg ataaagtaag ccattttgcc
    14341 ttattcttta tccagatctg gttatctgca aacgccttta tccgttcaaa gaaagggata
    14401 ccttattttg ggctaataat ttttgcctta ctctatgctt tcaccagcga atgggctcag
    14461 gcaaccttca cctcaacccg agaaggttct tggcttgatg ggctagcaga tatgctagga
    14521 gcctcacttt cattattgct ggtaaaatat tgcaaaaaat aaagcataaa agaccgcttg
    14581 ttatatggtt tagccatact acaagcggtc attttttacc aaaattatgc catcaactca
    14641 tcaatcaatt ctttcacact tttgattttg ttgatttgtg aaatgccatt gcccaccgac
    14701 acatagccat tgtcaaaatc cccttctaac atacccaaac gcattcctgt accagcgttc
    14761 attaccttag caatctcact acgagttgcc ccattttcgc tcatttcaaa gcattttttc
    14821 gctaatccag tcggcagtga acggtagtaa tgtggttcgg tacggaataa cagcagatca
    14881 ttggcatttg cctccacaat ccagtttttc actttttcgc ttgcacggca ttcttcggtg
    14941 gcgataaatg ccgtgccaat ccacacgcct tcagccccaa gcgttaaggc agcctgcacc
    15001 gcttttttat cggcaatacc accagccagc attatcggca aatccacctt gcccacaaat
    15061 tccgccagca cattaaaact gcctacctct ttcatcggca aagtaccgcc ctcatcaaaa
    15121 cccgtcagca ccaaaatatc tgctcccaat gcttgggctt ttaaagcgtc cgccaaattg
    15181 ggattaggca aacggcagat gattttaatg ccagcagctt tgaatttggc gtaaatctct
    15241 gggtcaagcc agccgttatc cagcaccaca ggcacacgct cttcaatgaa taaatccacc
    15301 attaacggaa tcagcgaaaa atcataagac aaaataaatg gtacgccaaa aggcttatcg
    15361 gtcaatgcct taaccttacg aatctcgtta cgcatacggt caagtacttc ttcgttggaa
    15421 gttggattgg tggtttgccc tgcgtgtggg gctaaaaaac caagcccacc agcctcggca
    15481 acgcttgcta ccagatgagc gtccgtcagc caagacattg gcgcttggac gatagggtgc
    15541 ttgatattta agatttgggt aatgcggttc attggatttt cctgtttgaa taaaaagaat
    15601 tggacgtagt ttaatggttt tggatttgag agggaatgcg tgaaaatggg aaggtggttt
    15661 tcggatttgg aaaattatca atgctaaaat acttgaaata cacacgccaa tcctcatatc
    15721 aacaaaattg aatatttaat tatggtaaaa gaaaatgtct attagatggg aaaacatcaa
    15781 gcccttacaa ggttctcaaa atagtgcttt tgaagagcta gtatgccaat tggcacgcca
    15841 agaatttaaa tctcaaggaa aatttactcg aatttctgca cctgatggtg ggattgaagc
    15901 aatgtgtgaa ttgccagatg gttccgtatg tggttggcaa gccaaatatt ttttaagctc
    15961 attttcttca tcacaatggc aacaaattga agattccttt aaagaatctt taaaaaacta
    16021 tcctaaacta accaaatact atgtttgtgt ggcaaccgat agagcaaatg ccaatgtatc
    16081 tggaaagaaa tcatttctta ccaaatggga ggagtatacc caaagatgga aagactttgc
    16141 tcaatcacaa ggtcgtgaaa tagaatttga attttgggga agttttgaat tatctgactt
    16201 attatcaaaa cctgaaaatg caggcaaaaa attcttttgg tttaacgaaa gcgaattatc
    16261 tgacaaatgg tttgaacaat acaatc
//
LOCUS       DANLXO010000061        16244 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.061, whole genome shotgun sequence.
ACCESSION   DANLXO010000061 DANLXO010000000
VERSION     DANLXO010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16244
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.061"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            78..1496
                     /gene="leuC"
                     /locus_tag="PXD69_001623"
     CDS             78..1496
                     /gene="leuC"
                     /locus_tag="PXD69_001623"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDL6283815.1"
                     /translation="MQQAKTLYQKLFDSHVVYEAEGETPIIYINRHLIHEVTSPQAFD
                     GLRVAGRQVRQVSKTFGTMDHSISTQVRDVQQLEGQAKIQVLELEKNCEETGIPLFDI
                     TKKQQGIVHVMGPEQGLTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTL
                     KQARAKSMKVEVRGKVNPGITAKDIVLAIIGKTTMAGGTGYVVEFCGEAIRDLSMEGR
                     MTVCNMAIEFGAKAGIVAPDETTFAYLKDRPNAPKGQDWEDAIEYWKTLKADEGAVYD
                     AEVILEAKDIAPQVTWGTNPGQVIGIDDVIPNPEDMADPVTRASAEKALAYIGLEAHT
                     DMKDVPVDQVFIGSCTNARIEDLRAAAAVMKGRKKADNVKRILVVPGSGLVKEQAEKE
                     GLDKIFIEAGAEWRNPGCSMCLGMNDDRLGEWERCASTSNRNFEGRQGRNGRTHLVSP
                     AMAAAAAVFGKFMDIRKVSLNA"
     gene            1509..2111
                     /gene="leuD"
                     /locus_tag="PXD69_001624"
     CDS             1509..2111
                     /gene="leuD"
                     /locus_tag="PXD69_001624"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDL6283816.1"
                     /translation="MAGIKQHSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFH
                     EWRYLDAEETQINPDFVLNFPQYQGATILLARKNLGCGSSREHAPWALADYGFKVMIA
                     PSFADIFYNNSLNNHMLPIKLTEEEVEEIFQWVWANEGKQIHVDLEAMTVTVGEKVYT
                     FELDEFRRHCLLNGLDNIGLTLQHEAAIAAYEKNIPAFLR"
     gene            complement(2183..2647)
                     /locus_tag="PXD69_001625"
     CDS             complement(2183..2647)
                     /locus_tag="PXD69_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283817.1"
                     /translation="MNKFKIALMATVAIGLFACTPSPQSNSTKQQAQVGYLKQNISQA
                     ELNNPKDFKRYSYYCKNFATGSSSYLATYFPLWSESRKQENFGIYFQLDGGKVYPFDH
                     LANISLNARATKFEVRYRSYQPIEGSFVELVAREFTSTYYKNNVPWLECREG"
     gene            complement(2671..3177)
                     /locus_tag="PXD69_001626"
     CDS             complement(2671..3177)
                     /locus_tag="PXD69_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283818.1"
                     /translation="MADPHIQSPMDFWDYLTVIIYRSGFVLATLMLLLLPYYPQTAQY
                     GLLVSGTMLASSLHLYAKSFRLIFQFSVWIGLLGAVFNFPLLAFGAMLLVIGGLSYKE
                     YFCFRVFGLNFQPLLVAVLWIAFALEWSLLVQILSLVCGLLLLVLSIQKWRMPLHFDI
                     GDKSKYQI"
     gene            complement(3200..4177)
                     /gene="dusA"
                     /locus_tag="PXD69_001627"
     CDS             complement(3200..4177)
                     /gene="dusA"
                     /locus_tag="PXD69_001627"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HDL6283819.1"
                     /translation="MTNEIQPFYRGRFSVAPMLDWTTRHCRYFHRQFSRQALLYTEMI
                     TAPAIIHAKYDLLEYDPSENPVALQLGGSDPAQLAHCAKLVAERGYAEINLNVGCPSD
                     RVQNGMFGACLMAKADLVADCIKAMQDAVEIPVTVKHRIGIDDLDSYEFLCDFIEKVQ
                     PYSNDFIVHARKAWLTGLSPKENREIPPLDYDRVYQLKRDFPHLKISINGGIKTIEEI
                     KQHLQFVDGVMVGREAYQNPSMLGEIDSQIFNENRPLVTAKEAVEKMFPYIERELAKG
                     VYLNHIVRHMLGAFQHCKGARQWRRHLSENATKSGAGVEVVEQALAFIG"
     gene            4528..5505
                     /locus_tag="PXD69_001628"
     CDS             4528..5505
                     /locus_tag="PXD69_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL6283820.1"
                     /translation="MSRNLFQKRLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQ
                     DYRTTINDHERHVLTRAMLAISQVEVNVKRFWGELYCYFPKPEMDDVGGTFAESEVRH
                     KDAYSFLLEKLGLNEMFSQIHEIEPLMNRIRYMESFMKDKDAGKGEFVLSLVLFSLFV
                     EHISLFGQFIIMMSFNKHKNLFKGISNAVEATSKEEEIHGKFGIALYEILRDEHSELF
                     TPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITKATVENYIKNRYNNSLSILGLE
                     PPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSKKMKQITADDLF"
     gene            5492..7159
                     /locus_tag="PXD69_001629"
     CDS             5492..7159
                     /locus_tag="PXD69_001629"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL6283821.1"
                     /translation="MTYFNTDRPDFHWLNEDSRLFLQRGYLLEGTTALDRIRFIAEHA
                     ERKLGIEGYADKFYHYMARGYFSLSSPIWSNFGLDRGLPISCFGSYIGDSIHEIMVTT
                     AEVGMMSKIGGGTSAYFGDIRPRGSLIKNNGKSDGSFNFSKLFDTVIDVISQGTSRKG
                     QFAGYIDIEHGDIDEWLDIHTEGNPIQLMYYGVCVGHDWLESMKAGDPYKRQLWAKLL
                     QRKTETGIPYLFFKDNANAGRPDVYKDKNMTIHASNLCTEIMLPSSNEESFVCCLSSM
                     NLLYFDEWKDTDAPETLTYFLDVVMSEFIEKSQSIPFLDRANRFARRHRALGLGVLGW
                     HSYLQANNIAFDSFQAMQKNNEIFKTLQAKTLKASQELAQRFGEPEILEGYGRRNTTL
                     MSIAPTKSSSFILGSVSPSVEPFKSNYYVKDLAKIKTVYKNPFLEKLLQEKGLDTEEI
                     WTSILQNDGSVQHLEQLSEHEKEVFKTFAEISQLSVIQQAAQRQKYIDQGQSINVMIH
                     PATPARDLNQLYLTAEELGLKSIYYQNSMSAAQVFNRNLLSCSSCEG"
     gene            7163..7582
                     /locus_tag="PXD69_001630"
     CDS             7163..7582
                     /locus_tag="PXD69_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283822.1"
                     /translation="MGNLSHTSPNTIVEVVGEFPEITSSGYTFDKGPIQLRIGKHTAP
                     NKGFGVKHIEAEHMQEILNLGFTSVNEFVKAIIVENAKIFCEFSDLKGNHRPIILKAS
                     IGIVVLERKFLESGTIYSVVTAYRRTNPHGIQIGTMK"
     gene            complement(7817..8578)
                     /gene="nudC"
                     /locus_tag="PXD69_001631"
     CDS             complement(7817..8578)
                     /gene="nudC"
                     /locus_tag="PXD69_001631"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HDL6283823.1"
                     /translation="MNKGYWIIVSDFDIALEAGEIPFGSAEELGLSGREKLTIGQYQG
                     SPAYLVKALESDNQREFAYLRSQINRPPELSHLLHRAVSLNHFFQTHQFCGKCGEKTI
                     LASDEIAIYCNACGNRAYPTISPSIIVAVRKGRQILLANHLRHKGTIYTTLAGFVEAG
                     EAVETAVHREVFEETGIKVKNVRYFGSQPWAFPNSLMLGFLADYESGEIQLQEEEICD
                     AKWFDCEESLPEIPQQGTIAFELIQATLKLCRESK"
     gene            complement(8571..9254)
                     /locus_tag="PXD69_001632"
     CDS             complement(8571..9254)
                     /locus_tag="PXD69_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDL6283824.1"
                     /translation="MKQPTFKRMTNKRSNFAKNLQKNPQKRPLTFAETTLVLLNKPYD
                     VLTQFTDEQGRKTLKDFITMPNIYPVGRLDRDSEGLLLLTNNGEIQHRLAHPKFDKQK
                     TYWVQVEGVPQPEDLAKLAKGVELKDGLTKPAKVRAIATPDFAWNIAPQIRERKTIPT
                     SWIELIISEGKNRQVRRMTAHIGFPTLRLIRVGIGQFRLGNLGCGEFQVLSENEKRKL
                     FTQLGLKDE"
     gene            complement(9251..10099)
                     /locus_tag="PXD69_001633"
     CDS             complement(9251..10099)
                     /locus_tag="PXD69_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6283825.1"
                     /translation="MEKRTLALLKVHGTAVLFGASGIFGALIQSSAETIVLGRVMIAF
                     AIISLYFLWKKQPLVKLNLQQMAQLAFSAALLAAHWVTFFVAVKVGGVAVATLGFASF
                     PAFVALFESLFFREKLRFREVVLLIAITVGLILVTPEFTFGNQATQGLLWGVLSALVY
                     GILAVANRRTMSKISGVQASWWQYIFATLFLLPLSITEFPSVSTQDWFWIFCIGFLCT
                     TLAYTLFISSLDTINARTASMIISLEPVYAIVIAWLCFNEVPTLKMIIGGLIILLSVA
                     WANLKK"
     gene            complement(10099..10584)
                     /locus_tag="PXD69_001634"
     CDS             complement(10099..10584)
                     /locus_tag="PXD69_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDL6283826.1"
                     /translation="MPILAILFGIFFYIYCEISLLVNIGSIIGVLPTILLLVVISFLG
                     LWIVKLRGVYTLFSIKQDLSQGKIPTEAVGNSVMFIVAGILLIIPGFLSDILAILCVL
                     PFSRKWIQAFVINSVKNKVFMHFTAQTSSFSVTSAQDSNTFDAEFERKPDEQDQHNRI
                     K"
     gene            complement(10586..11908)
                     /gene="pepQ"
                     /locus_tag="PXD69_001635"
     CDS             complement(10586..11908)
                     /gene="pepQ"
                     /locus_tag="PXD69_001635"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HDL6283827.1"
                     /translation="MKNLFSTHLARLQQTVQSLLENAFLDGLWIYAGKAKTLFLDDQT
                     APFKINPYFNYFFPYPQAENCWLFLDGKNKPKIYFYAPEDYWVSTLKVPTEAFFAAEF
                     EWVLLRAENEIATFIQNPTACAFIGEDVELAKKLGFSHINPQKVLNSLNFARSIKTEF
                     EIESIYQAQFSALKGHQVAKEAFFAGKSEFEINLEYLKATQQSDLNVPYGNIVAINQN
                     GAVLHYTALDFDTHAKRHSFLIDAGTTVNGYASDLTRTYAFDSGSEFAELVAKMEQLK
                     LQIIAELSIGVNYLHYHTRMQQMISQLLAEHQFIHLSAEQIFEQGISRTFFPHGLGHL
                     LGIQVHDVGGFQQNARGSHKAPPEVYPSLRCTRELQENMVLTIEPGFYFIEMLLKPWK
                     NSALSSAFNWQKIEAFKAFGGIRTEDNIVMRANGAENLTANAAATLGG"
     gene            11919..12161
                     /gene="tusA"
                     /locus_tag="PXD69_001636"
     CDS             11919..12161
                     /gene="tusA"
                     /locus_tag="PXD69_001636"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HDL6283828.1"
                     /translation="MTQLTVNKELDTLGLRCPEPVMLTRKTIRNMEEGEILHIIADDP
                     ATTRDIPSFCEFMDHQLIQKEVDSTPYHYWIKKGLE"
     gene            complement(12228..12659)
                     /gene="rraB"
                     /locus_tag="PXD69_001637"
     CDS             complement(12228..12659)
                     /gene="rraB"
                     /locus_tag="PXD69_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HDL6283829.1"
                     /translation="MYNLDELRTETDETISSLLADGSDPEALYIIEHHVAHHDFDKLE
                     KLVVDAYKLGYEISEAEEVEDENGKVIFVCDIVSEIHLNADLITAQQKELLPLIEKAG
                     AEYEGWGTYFEDPNADEDEYGDDGEFFDDENDDFEDEPRRH"
     gene            complement(12674..13285)
                     /locus_tag="PXD69_001638"
     CDS             complement(12674..13285)
                     /locus_tag="PXD69_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDL6283830.1"
                     /translation="MKLNYHKTHFLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNA
                     LTNQKSLARTSKTPGRTQLINLFKVETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYL
                     QKRECLGGVVILMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKM
                     VREAILPFQGDIQVEAYSALNKIGIDKLSNKLDSWFAPKLITE"
     gene            complement(13287..13703)
                     /locus_tag="PXD69_001639"
     CDS             complement(13287..13703)
                     /locus_tag="PXD69_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDL6283831.1"
                     /translation="MSWYKALFSFNGRLNRRGFWIGFGIHFLFLFMVAMWINLAELSL
                     LSVLPLIITGFSLSAIIIKRLHDRNRSAKALLMALVPIICYLAAPYSQGIMQILLGQV
                     MPAFIGMLLFLEWGVFAGNPEPNQYGEQGLSFKFRE"
     gene            complement(13707..14537)
                     /locus_tag="PXD69_001640"
     CDS             complement(13707..14537)
                     /locus_tag="PXD69_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HDL6283832.1"
                     /translation="MFEYFLSLSPIWQAFLAGLFTWGCTIFGSSFVYFFKSVNRKLLD
                     SMMGFAAGVMIAASFWSLLAPSLEYAEADYGSLAWLPAAIGFLAGGAFIRLIDYVVPH
                     LHLSKPIEQAEGNDQLKQGLSKSTLLFLAITIHNIPEGLAIGVAFGALATQVSGVDAS
                     IMGAIGLAIGIGLQNIPEGSSLVLPIRGEGHSRKKAFWYGSMSAVVEPIAAVIGAVFV
                     LSMTAILPYALAFAAGAMIFVVVEELIPESQSSGNTDIATLSLMLGFVVMMVLDVALG
                     "
     gene            complement(14874..14989)
                     /gene="rrf"
                     /locus_tag="PXD69_001641"
     rRNA            complement(14874..14989)
                     /gene="rrf"
                     /locus_tag="PXD69_001641"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(15151..>16244)
                     /locus_tag="PXD69_001642"
     rRNA            complement(15151..>16244)
                     /locus_tag="PXD69_001642"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         4952 a         3633 c         3168 g         4491 t
ORIGIN      
        1 aagcggtcat ttttgcaaaa ttttttgcaa atttaaccgc ttgtattaaa agttaccctt
       61 ttgagttgga acattttatg caacaagcca aaaccctata tcaaaaacta ttcgactcac
      121 acgttgtgta tgaagccgaa ggcgaaacgc cgattattta tattaaccgc cacttaattc
      181 acgaagttac cagcccgcaa gcgtttgacg gcttgcgtgt tgccggtcgc caagttcgcc
      241 aagtcagtaa aaccttcggc acaatggacc acagtatttc aacccaagtg cgtgatgtac
      301 agcaacttga agggcaagcg aaaattcaag tattagaatt agaaaaaaac tgcgaagaaa
      361 ccggtatccc actgtttgac atcactaaaa aacaacaagg tatcgttcac gtaatggggc
      421 cggagcaagg cttaacttta cccggtatga ccattgtatg tggtgactcg cacaccgcca
      481 ctcacggggc ctttggtgcg ttagccttcg gtatcggtac ttccgaagtg gaacacgttt
      541 tagccaccca aaccttaaaa caggcccgtg caaaaagtat gaaagtggaa gtccgtggca
      601 aagtaaaccc gggcattacc gcaaaagata ttgtgcttgc gatcatcggt aaaacaacta
      661 tggctggcgg tacaggctat gtagtggaat tttgtggcga agcaattcgt gatctttcaa
      721 tggaagggcg aatgacagtg tgtaatatgg cgattgagtt tggtgcgaaa gccggtattg
      781 ttgccccgga tgaaaccacg ttcgcttact tgaaagaccg cccaaatgca ccaaaaggtc
      841 aagattggga agatgccatt gaatattgga aaaccctcaa agccgatgag ggtgcagttt
      901 acgatgcgga agtgatctta gaagcaaaag acattgctcc acaagtgact tggggaacca
      961 acccggggca ggtgatcggt attgatgatg taattccaaa tccggaagat atggccgatc
     1021 ctgttactcg tgcctctgcg gaaaaagcct tagcttacat cggcttagaa gcccatacag
     1081 atatgaaaga tgtaccggtt gatcaagtct ttattggttc ttgtactaat gctcgtattg
     1141 aagatttgcg tgctgcggca gcagtaatga aagggcgtaa aaaagccgac aatgtaaaac
     1201 gtattctcgt tgtgccaggt tcaggtttgg taaaagagca agcagaaaaa gagggcttgg
     1261 ataaaatctt cattgaagcc ggtgcagaat ggcgtaaccc gggttgctca atgtgtttgg
     1321 gaatgaacga tgaccgcttg ggcgaatggg aacgttgtgc ctctacgtct aaccgtaact
     1381 ttgagggcag acaaggacgt aacggtcgta cccacttagt cagcccggca atggcggctg
     1441 cggcggcggt gttcggtaaa tttatggata ttcgcaaagt gtcattaaac gcataatagg
     1501 aggaaaaaat ggcaggtatt aaacaacatt caggcttggt cgttcctctt gatgcagcga
     1561 acgtagacac cgatgcaatc attccaaaac aatttttgca agccattact cgagtcggct
     1621 ttggtaagca ccttttccac gaatggcgtt atttagatgc ggaagagact caaatcaacc
     1681 ccgatttcgt actgaacttc ccacaatatc aaggtgcaac cattttactc gcccgtaaaa
     1741 atttaggctg tggctcttct cgtgagcacg ccccttgggc attggcagat tacggtttta
     1801 aagtaatgat cgccccaagt tttgcggata ttttctacaa taacagctta aataaccata
     1861 tgttgccgat taaattaacc gaagaggaag tcgaagagat cttccaatgg gtgtgggcaa
     1921 atgaaggaaa acagatccac gttgatttag aagcgatgac tgtgactgtt ggcgagaaag
     1981 tttatacctt tgagttagac gaattccgcc gccactgctt attaaacggt ttggataata
     2041 tcggcttaac cctacaacac gaagctgcga ttgctgctta tgagaaaaac attccggcat
     2101 ttttacgcta attaaaatac aaaaaaacgg ctaacatctt taaggcgtta gtcgttttct
     2161 ttttagccat tttctttggc aattagcctt ctcggcactc taaccaaggc acattatttt
     2221 tgtaataagt tgaagtaaac tctcgtgcca ctaactctac aaaactgcct tcaatcggct
     2281 gataagaacg ataacgcact tcaaattttg ttgctcttgc attcaaactg atgttggcaa
     2341 gatggtcgaa cggataaacc tttccgccat caagttgaaa atagatacca aaattctctt
     2401 gcttacggct ttcagaccaa agtggaaaat aggttgccaa atatgaactg ctgcctgttg
     2461 caaaattctt acaataatag ctataacgct taaaatcttt cggattattc aattccgctt
     2521 ggctgatatt ctgtttcaaa tatccaacct gtgcttgttg cttagttgag tttgattgtg
     2581 gtgagggcgt acaagcaaat aagccaattg ccactgttgc cattaaagca attttgaatt
     2641 tattcataaa aatcccgata aaatattaaa ttaaatctga tatttgcttt tatcgccaat
     2701 atcaaaatgc agcggcattc gccatttttg aatactcagc acaagaagca acaagccaca
     2761 gacaaggctt aaaatttgca ccaataaaga ccattctagt gcaaaagcaa tccacaatac
     2821 cgccactaaa agcggttgga aatttaagcc gaatactcta aaacagaaat attctttata
     2881 gcttaatccg ccgatcacca gtagcattgc cccgaacgca agcaaaggga aattaaacac
     2941 agcaccaagt aagccaatcc aaacagaaaa ttggaaaatc aggcgaaacg atttggcata
     3001 aagatgcaaa gaagatgcca acattgtgcc agatactaat aaaccatatt gtgccgtttg
     3061 cggataataa ggcaataaaa gcaacatcaa tgtagctaac acaaaaccgc tgcggtaaat
     3121 gatgacggtt aaataatccc aaaaatccat tggcgattga atatgtggat ctgccataac
     3181 tgcctcctta aacaataaat tagccaataa acgcaagggc ttgttccact acttctacac
     3241 cggctcccga cttagtggca ttttcactta aatgacgacg ccactgcctc gctcctttgc
     3301 aatgttgaaa cgcaccaagc atatggcgaa cgatatgatt taaatagaca cctttggcaa
     3361 gctcacgttc aatataaggg aacatctttt ccaccgcttc ttttgccgtt acaagcggtc
     3421 gattttcatt aaaaatttgc gaatcgatct cgcctagcat tgacgggttt tgataggcct
     3481 cacgccctac cattacccca tcaacaaact gcaaatgctg tttaatttcc tcaatggttt
     3541 taatgccgcc attgatgcta atctttaaat gcggaaaatc tcgcttgagc tgataaaccc
     3601 gatcataatc taaaggcgga atttcacggt tttccttcgg gcttaaccct gtcagccacg
     3661 ccttgcgggc gtgtacgata aaatcattgc tataaggttg cactttttcg ataaaatcac
     3721 acaaaaattc atagctgtct aaatcatcaa tcccaatacg atgtttaacc gtgaccggaa
     3781 tttccaccgc atcttgcatt gctttaatac aatccgccac taaatctgct tttgccatca
     3841 aacaagcccc aaacataccg ttttgcactc ggtctgacgg gcaaccgaca tttagattaa
     3901 tctcggcata gcctcgctct gccaccaatt tggcacaatg agccaactgt gccgggtcgc
     3961 ttccacccag ttgcaaagcc accggattct cgctcggatc atattccaac aaatcatatt
     4021 tggcgtgaat aatcgccggg gcggtgatca tttcggtata aagcaaggct tgacgactaa
     4081 attggcgatg aaaatagcgg cagtgacggg ttgtccaatc taacattgga gcaaccgaaa
     4141 aacgtccacg gtaaaaaggt tgaatttcgt tagtcataaa aatatcaaaa taaagcggta
     4201 aaaaatcagt aaaaaataac cgcttgtaag cgattcaaaa caagcagcca tcatactcga
     4261 aaaagccaga taaacatagt ttcctcaagg cttccccatc tatctgcgca cttttaaaac
     4321 aaccttaaaa cacaatatat agtgtttcaa catcaaatca cacacaacat attgaagcaa
     4381 aaatttacaa aattattttt ctttataaat caataagcta ccaaagacca ataaaaaaga
     4441 gtgtttgtca agacttgtct tgaaactttt tttgcataca atcatctacc agttccaaac
     4501 ataaacttta agatagagcc tacgaatatg tctagaaacc tcttccaaaa acgcttaaat
     4561 attaagccgt atgagtatcc tgagcttctt gaatttaaag atgcaattcg ccattcttac
     4621 tggttacaca ccgaatttaa cttcaccggc gatattcaag actatcgcac caccattaac
     4681 gatcacgaac gtcacgtgtt aacccgagca atgcttgcga tttcacaagt agaagtgaat
     4741 gtaaaacgtt tctggggcga gctatactgc tatttcccaa aaccggagat ggacgatgta
     4801 ggcggtactt ttgctgaaag tgaagttcgc cataaagatg cttactcgtt cctattggaa
     4861 aaattaggcc taaatgaaat gttcagtcaa attcatgaaa ttgaaccatt aatgaaccgc
     4921 attcgttata tggaaagttt tatgaaagat aaagatgctg gcaaaggcga atttgtttta
     4981 tcgttagtgc tgttctcttt atttgttgag catatttcat tgtttggaca gtttattatc
     5041 atgatgtcgt tcaacaagca taaaaacctg tttaaaggga tttccaatgc ggttgaagcc
     5101 acctcaaaag aggaagaaat tcacggtaaa ttcggaattg cgttatacga aattttacgt
     5161 gacgaacaca gtgaactatt cacaccagaa ttttttgaag atttgcaaac cttggcaaat
     5221 caagcgtttg aagcagaacg tggcatctta gactggattt tcgaagaagg tgatttaagc
     5281 tttatcacca aagcgacggt agaaaattac attaaaaacc gttacaacaa ttctttaagc
     5341 attttagggt tagagccgcc acacgacatc gaccctgaat tattaaaaga gactgagtgg
     5401 tttgatattg aaattctttc aaccaaagaa accgatttct ttaacaaacg tagcaccgat
     5461 tattctaaaa aaatgaaaca gattaccgca gatgacttat tttaatacag accgcccgga
     5521 cttccactgg cttaatgaag acagccgttt attcttacaa cgtggctatt tattggaagg
     5581 aacaaccgca ttagaccgca ttcgttttat tgccgaacac gcagagcgaa aactcggcat
     5641 tgaaggctat gccgataaat tctatcacta tatggcaaga ggctacttct cgctttcttc
     5701 gccaatttgg tcaaactttg gcttagatcg tggcttaccg atttcttgtt tcggtagcta
     5761 catcggcgac tctatccatg aaattatggt gactaccgct gaagtgggca tgatgagtaa
     5821 aattggcggt ggtacttcgg cctactttgg cgatattcgt ccgcgtggct cgttaattaa
     5881 aaacaacggt aaatcagacg gctcatttaa cttcagtaaa ttatttgaca ctgtgattga
     5941 cgtgatttca caaggaacat cacgcaaagg tcagtttgcc ggttatattg atattgagca
     6001 cggcgatatt gacgaatggc tggatattca caccgaaggc aacccaattc aattaatgta
     6061 ttacggtgtg tgtgtcggtc acgattggtt agagtcaatg aaagccggcg atccatacaa
     6121 acgtcagctt tgggcaaaat tgttacaacg taaaaccgaa accggtatcc cttatttatt
     6181 ctttaaagac aatgccaacg caggtcgtcc tgatgtatat aaagataaaa atatgacgat
     6241 tcacgcctct aacttatgta ctgaaattat gttgccttcc agcaacgaag aaagtttcgt
     6301 atgctgttta tcgtctatga acctactcta ctttgatgag tggaaagata ccgatgcacc
     6361 agaaacatta acctatttcc tcgatgttgt aatgagtgaa tttattgaga aaagtcaatc
     6421 aattccattc ttagaccgtg caaaccgctt tgcccgtcgc catcgtgcat taggtttagg
     6481 cgtgttgggc tggcacagct atctacaggc aaataatatt gcctttgaca gcttccaagc
     6541 gatgcaaaaa aacaacgaga ttttcaaaac gcttcaagca aaaaccttga aagcctcgca
     6601 agaattggct caacgcttcg gcgagccgga aattttagag ggctatggtc gccgtaatac
     6661 tacattaatg agtattgctc cgactaaatc cagtagcttt attttaggca gtgtgtcgcc
     6721 atcggtagag ccgtttaaat ccaactacta tgtaaaagat ttagcgaaga tcaaaaccgt
     6781 gtataaaaac ccgttcttag agaaattact ccaagaaaaa gggctagaca ccgaagaaat
     6841 ttggacgtct attttacaaa atgatggctc ggttcagcat ttggaacagc tttccgagca
     6901 cgaaaaagaa gtatttaaaa cctttgccga aatcagccaa ttaagcgtga ttcagcaagc
     6961 tgctcaacgt caaaaatata ttgaccaagg gcaaagtatt aatgtgatga tccacccagc
     7021 cacaccggct cgtgatctta accaattata cttaacagca gaagagctgg gcttaaaatc
     7081 catctactac caaaactcaa tgagtgcagc acaggtattt aaccgtaacc tattaagctg
     7141 ctcaagttgc gaagggtaaa taatgggaaa tttatcgcat acttcaccta atactattgt
     7201 tgaagttgtt ggtgaatttc ctgaaataac atctagtggg tatacctttg ataaaggtcc
     7261 tattcaatta agaatcggca aacatactgc tccaaataaa ggctttggtg taaagcatat
     7321 tgaagccgag catatgcaag aaattcttaa tctaggattt acatcagtta atgaatttgt
     7381 caaagctatc atagtagaaa acgctaaaat tttttgcgaa ttctcagatt taaaaggcaa
     7441 tcatcgccct attattctga aagcaagtat tggcattgtg gttctagagc gtaagttttt
     7501 ggaaagcggt acgatatatt cagttgtaac cgcttataga agaacaaatc ctcacggaat
     7561 acaaataggc actatgaaat aaagtacgtt agtgttataa tcagttccac gcaagagcat
     7621 ttgtagaaaa taacaggcgg atttggtttt ctactgtggg cggcaggttt ccgctaacct
     7681 gtaatagcta tttaattttt atattaaatc ctgaacttga aacagactaa gggattgctg
     7741 cggtagctaa gaatacaaac ctctctataa tcatatagag aggttttttc ttattgatga
     7801 gcacaagtta agataattat ttactctccc gacataactt caaggtagct tgaatcagct
     7861 caaaagctat tgtgccttgt tgtgggattt caggtaagct ttcctcacag tcgaaccatt
     7921 ttgcatcgca gatttcttct tcctgtagct gaatttcacc gctttcataa tccgctaaaa
     7981 aacctagcat taatgaattg ggaaacgccc aaggttggct tccaaaataa cgcacatttt
     8041 tcactttaat gcccgtttct tcaaacactt cacgatgcac cgcagtttct accgcctcac
     8101 cggcttcgac aaaaccggct aaagtggtat aaattgtgcc tttatggcgt agatgattgg
     8161 ctagtaggat ttgtctgcct tttcgcaccg ccacaataat tgacgggcta atcgttgggt
     8221 aagctcgatt gccacacgca ttgcagtaaa ttgcaatttc atcgcttgcc agtatggttt
     8281 tctcgccaca ttttccgcaa aattggtgag tctgaaagaa atggttaagc gaaacagctc
     8341 gatgcaacaa atgagacagt tcgggtggtc ggttaatttg gcttcttaaa taagcaaact
     8401 ctcgctgatt atccgattct aacgccttca ccaaataagc cggcgagcct tgatattgcc
     8461 cgatggttaa tttctcacgt ccacttaagc ccagctcttc cgcacttccg aatggaattt
     8521 ccccagcctc caaggcaata tcaaaatcgc tgacgataat ccaatatcct ttattcatct
     8581 ttcaatccta attgtgtaaa caacttacgt ttttcatttt cagatagcac ttgaaactca
     8641 ccacagccta aattgcctaa tctaaactgg cctatcccaa cacgaattaa ccgtaaagtc
     8701 gggaaaccga tatgtgcagt cattcttctg acttggcgat ttttcccttc agaaataatc
     8761 aattctatcc agctggtcgg aatggttttc cgctcacgaa tttgcggggc gatattccaa
     8821 gcaaaatcgg gcgttgctat tgctctgact ttcgcgggct tggtcaaacc atcttttaac
     8881 tccacccctt ttgctaattt ggcaagatct tccggttgtg gaacaccctc cacttgtacc
     8941 caataggttt tctgcttgtc aaatttcggg tgagctaaac ggtgctggat ttcgccatta
     9001 ttagtcaaaa gcaacaatcc ttcactgtct ctatctagcc gcccgaccgg gtaaatattg
     9061 ggcatcgtaa taaaatcttt tagcgttttt cgcccctgtt catcggtaaa ttgggttagt
     9121 acatcataag gcttattgag taacacaagg gtggtttccg caaaggtaag cggtcgtttt
     9181 tgcggatttt tttgcaaatt tttagcgaaa tttgaccgct tgtttgtcat tcttttaaag
     9241 gttggttgtt tcattttttc aggttcgccc acgcaacaga aagtaaaata attaagccac
     9301 cgataatcat tttaagggtt ggcacttcat taaagcaaag ccacgcgatc acaatcgcat
     9361 acaccggctc gagggaaata atcattgagg cagtacgggc gttgatggta tcaaggcttg
     9421 aaataaacag cgtataggca agggttgtac ataaaaaacc gatacagaaa atccaaaacc
     9481 aatcttgggt ggaaacgctt ggaaattcag tgatggagag aggcaacaga aaaagtgtag
     9541 caaaaatata ctgccaccag cttgcttgca caccggaaat tttgctcatg gtacggcgat
     9601 tcgctaccgc caaaatacca tacaccaaag cagataacac gccccacaat aaaccttgag
     9661 tggcttgatt accaaaagta aattcagggg taactaaaat taaaccaacc gtgatggcaa
     9721 ttaatagcac cacttcacga aagcgtaatt tttcacggaa gaacaggctt tcaaataacg
     9781 ccacaaatgc cggaaagctg gcaaagccta aggttgctac cgccacacca cctactttaa
     9841 ccgccacaaa aaaagtaacc cagtgggcag ctaataaagc tgcagaaaat gcaagttgag
     9901 ccatttgctg taagttgagc tttacaagcg gttgtttttt ccataaaaaa tacaaagaga
     9961 tgatagcaaa agcaatcatc actcgcccaa gcacaatggt ttcagccgag ctttgaatta
    10021 atgctccgaa gatccccgag gcaccaaata aaaccgctgt gccgtgtact ttaagtagtg
    10081 caagtgttct tttctccact atttgatcct attatgttga tcttgctcgt ccggcttgcg
    10141 ttcaaattct gcatcaaacg tgttgctatc ttgcgcagat gtaacagaaa aagacgaagt
    10201 ttgggcggta aaatgcataa acaccttatt ctttacgcta ttaattacga aggcttgaat
    10261 ccattttcgg ctaaagggta acacgcataa aatcgctaaa atatcactta aaaagccggg
    10321 aataatcagc aaaatgccgg ctacaataaa catcaccgag ttgccgactg cttcagtcgg
    10381 tatcttgcct tggcttaaat cttgcttgat ggaaaagagg gtataaacgc cccttaactt
    10441 cacaatccat aaccctaaaa atgaaatcac gaccagtaac aaaatcgtgg gtaacacgcc
    10501 aatgatcgag ccaatattca ccagcagcga aatttcgcaa tagatataaa agaaaatacc
    10561 aaacagaatc gctaaaatag gcatattatc ctcccaacgt tgcggcagcg tttgccgtca
    10621 gattttctgc cccattggct cgcatgacaa tattgtcttc ggtacgaatc ccgccaaagg
    10681 ctttgaaagc ctcaattttc tgccagttaa aggcagaaga taaggcactg tttttccaag
    10741 gcttaagtag catctcaata aaataaaaac ccggctcaat ggtaagcacc atattttcct
    10801 gtagctcacg ggtacaacgc aaacttgggt aaacctctgg aggagcttta tggctgcctc
    10861 gggcattttg ctgaaaaccg cccacatcgt gcacttgaat acccaataaa tgccctagtc
    10921 cgtgtgggaa gaacgtacgg ctaatccctt gttcaaaaat ttgctcggct gaaagatgaa
    10981 taaattgatg ttccgctaat aattgcgaaa tcatctgctg cattcgggtg tgataatgca
    11041 ggtagttcac cccaatactc agctcagcaa taatctgcaa cttcaactgt tccattttcg
    11101 ccaccagctc ggcaaattca gaaccgctgt caaaggcata ggtgcgggtg agatcggagg
    11161 cataaccatt taccgttgtg ccggcatcaa ttaaaaaact gtggcgtttt gcgtgggtgt
    11221 caaaatctaa cgccgtataa tgtagcaccg caccattttg attaatcgcc acaatattgc
    11281 cataaggaac attgagatca gattgctgcg tcgctttcaa atattcaagg ttgatttcaa
    11341 attcgctttt gccggcaaaa aatgcctctt ttgctacttg atgccctttt aaggctgaaa
    11401 attgggcttg gtaaatactt tcaatttcaa actccgtttt gatggagcgg gcaaaattca
    11461 ggctattcag cactttctgc ggattaatat ggctaaagcc taactttttg gctagctcaa
    11521 catcttcacc gataaaggca caagcggtcg gattttggat aaaggttgca atttcattct
    11581 ctgctctcaa caaaacccac tcaaattccg cagcgaaaaa ggcctccgtt ggcactttta
    11641 gagtggaaac ccaataatct tcaggggcat aaaaatagat tttcggctta tttttgccat
    11701 ctaaaaataa ccagcaattt tcagcttggg gatatgggaa aaagtaatta aaataagggt
    11761 taattttaaa cggggcggtt tgatcgtcta aaaataaggt ttttgccttg ccggcataaa
    11821 tccataaacc gtctaaaaag gcattttcca gcaagctttg cactgtctgt tgcaaacgtg
    11881 cgagatgcgt agagaataga tttttcataa ggaataaaat gactcaatta actgtaaata
    11941 aagaattaga taccttgggg ctacgttgcc cagagccggt gatgctcacc cgtaaaacaa
    12001 tccgtaatat ggaagaggga gaaattttgc atatcatcgc cgatgacccg gccactaccc
    12061 gtgatattcc gagtttctgc gaatttatgg atcaccaatt aattcaaaaa gaggtggact
    12121 ccaccccata ccattactgg attaaaaaag gcttggaata aaccacaagc ggtcgatttt
    12181 agccataaaa ttgcaaattt atgcacaaaa tcgaccgctt gttttaatta atgacggcga
    12241 ggttcgtcct caaaatcgtc attttcatca tcgaaaaatt caccgtcatc gccgtactca
    12301 tcttcatcag cattcggatc ttcaaagtag gttccccagc cctcatactc cgcaccggct
    12361 ttttcaatta atggcagtaa ctctttttgt tgtgcggtaa tgagatccgc attcaagtga
    12421 atttcgctca caatgtcgca tacaaaaatc actttaccat tttcgtcttc cacttcttcc
    12481 gcttcggaaa tttcatagcc cagcttatag gcatcaacta ctaatttttc caatttatca
    12541 aaatcgtggt gagcaacgtg gtgttcaata atataaaggg cttcagggtc tgaaccatcg
    12601 gctaataatg atgaaatggt ttcatcggtt tctgtgcgta attcatcgag attgtacata
    12661 ttgaattcct tacttattct gtgattaatt ttggtgcaaa ccagctatct aatttgttcg
    12721 acagcttatc aataccgatt ttattcagtg cggaataagc ctctacttgg atatcacctt
    12781 ggaatggtaa aatcgcttct cttaccattt ttacctgctt agagcgtgcc gattggctta
    12841 acttatccgc tttggtcaac agcagtaaca ccggcaagtt ggctgacact gcccattcaa
    12901 tcatctgttg atctaaatct ttcaacgggt ggcgaatatc cattaaaatc accacaccgc
    12961 ctaaacattc acgcttttgt aaatactcgc ctaatgcttt ttgccactgg attttcatct
    13021 gttcaggtac tgctgcatag ccatagccag gtaaatccac taatttacaa ttcgtttcaa
    13081 ccttaaacaa gttaatcaac tgcgttcgcc ccggtgtttt ggaagttcgg gctaaacttt
    13141 tttggttagt taaagcgttc aaagcagtcg atttaccggc atttgaacgc ccggcaaaag
    13201 caatctccac acctgtatct tcaggtaaat gacgaatatc cggtgctgaa gttaaaaaat
    13261 gggttttatg atagtttaat ttcattttat tctctaaatt taaaagataa gccttgctcg
    13321 ccatattgat tcggttcagg attaccggca aatacacccc attctaaaaa gagcaacatt
    13381 ccaataaatg ccggcatcac ctgtccaagc aatatctgca taattccttg tgaataagga
    13441 gctgcaagat aacaaataat cggcactaat gccattaaca gggcttttgc cgaacgattt
    13501 cggtcgtgta atcgtttaat aataatagca gacaggctaa atcctgtaat tataagcggt
    13561 agcacactca ataaagacaa ttcagccaaa tttatccaca tagcaaccat aaacaggaaa
    13621 agaaagtgga ttccaaatcc aatccaaaaa cctcgtctat ttagcctacc gttaaaacta
    13681 aaaagtgctt tataccaact cattttctac cctaaagcta catcaagtac catcattact
    13741 acaaagccta acatcaggct taaagtcgca atatcagtat ttcccgaact ttgcgattcc
    13801 ggaatcagtt cttctacgac cacaaaaatc atcgctccgg cagcaaaggc aagagcataa
    13861 ggtaaaatag ccgtcatcga cagcacaaaa accgccccaa tcaccgccgc aataggctca
    13921 accactgctg acatagagcc ataccaaaat gctttcttcc gactatgccc ttcgcctcga
    13981 attggcaata caagtgacga gccttcggga atgttttgta accctattcc gattgccaaa
    14041 ccgatagctc ccataatgga agcatctacg cctgaaactt gggttgccaa agcaccgaaa
    14101 gccaccccta tggctaatcc ttctggaata ttatgaatgg taatcgcaag aaaaagcaaa
    14161 gtagattttg ataagccttg tttaagttga tcatttcctt cagcttgctc aatcggctta
    14221 ctcaagtgca aatgcggcac aacatagtca attaatcgaa taaaagctcc accggcaaga
    14281 aagccaatcg ctgcaggcag ccaagctaaa gagccataat ccgcctcggc atattctaaa
    14341 gaaggtgcaa gcaaagacca aaacgaggct gcaatcatta cacctgcggc aaagcccatc
    14401 atactgtcta ataattttcg attaaccgat ttaaaaaaat agacaaatga cgaaccgaaa
    14461 atcgtacaac cccaagtaaa taaacccgct aaaaaagctt gccatattgg agaaagtgaa
    14521 aggaaatatt caaacaagaa atagtaccag ctaaaataaa tattggctca ttctatcaaa
    14581 gattcagggt tattaatata gtgtagccaa aggctcaacg aagatttcac ttgtaaaact
    14641 tagcaagaaa ataaccgctt gcatttccct ttcataaata caatgaaaat cctaacaagc
    14701 ggtcattttc cgtgagtttt ttacctttac cacaacaaca aaaaaccgcc tgtatctcta
    14761 caggcggctc tttcttggat tacttgtact ttgtttattt gtacttattt tgcttttgct
    14821 taagttttcg cttttgtaac ttttagcttt cgcttaagct cgcttaaatt aaaacccgac
    14881 gatgctctac tctcacatgg cgaatcacca cactaccatc gacgttactg cgttttactt
    14941 ctgagttcgg tatggggtca ggtaggacca cagcactctt gtcgtcggga aaattctttt
    15001 ctatttttga atttctttaa gttaacttcc taatctaact cttagttcac tttaatagtt
    15061 agattaactt ccttaacttc gattgatttc ttctctagtt tcgttcttct tctcaataca
    15121 aaaacaagcc taaaaacatt tgagcgttgt atagttaagc ctctcgggca attagtactg
    15181 gttagctcaa tgtctcacaa cacttacaca cccagcctat ctacgtcgta gtctccaaca
    15241 acccttacac acttatagtg tgggagaact catctcgagg caagtttcgt gcttagatgc
    15301 tttcagcact tatctcttcc gcatgtagct acccagcaat gcctctggcg agacaactgg
    15361 aacaccagtg atgcgtccac tccggtcctc tcgtactagg agcagcccct ctcaattctc
    15421 caacgcccac ggcagatagg gaccgaactg tctcacgacg ttctaaaccc agctcgcgta
    15481 ccactttaaa tggcgaacag ccataccctt gggacctact tcagccccag gatgtgatga
    15541 gccgacatcg aggtgccaaa caccgccgtc gatatgaact cttgggcggt atcagcctgt
    15601 tatccccgga gtacctttta tccgttgagc gatggccctt ccattcagaa ccaccggatc
    15661 actatgacct gctttcgcac ctgctcgact tgtctgtctc gcagttaagc ttgcttatac
    15721 cattgcacta acctcacgat gtccgaccgt gattagcaaa ccttcgtgct cctccgttac
    15781 tctttgggag gagaccgccc cagtcaaact acccaccaga cactgtccga gaccgcgttc
    15841 cgcaatcttc gttagaacat caaacgttaa agggtggtat ttcaaggacg cctccacaat
    15901 cactggcgtg actgcttcaa aggctcccac ctatcctaca catcaaaatt caatgttcag
    15961 tgtcaagcta tagtaaaggt tcacggggtc tttccgtcta gccgcgggta caccgcatct
    16021 tcacggcgat ttcaatttca ctgagtctcg ggtggagaca gcctggccat cattatgcca
    16081 ttcgtgcagg tcggaactta cccgacaagg aatttcgcta ccttaggacc gttatagtta
    16141 cggccgccgt ttactggggc ttcgatcagg agcttctctt gcgataacac catcaattaa
    16201 ccttccagca ccgggcaggc atcacaccct atacgtccac tttc
//
LOCUS       DANLXO010000062        16241 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.062, whole genome shotgun sequence.
ACCESSION   DANLXO010000062 DANLXO010000000
VERSION     DANLXO010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16241
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.062"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..329)
                     /locus_tag="PXD69_001643"
     CDS             complement(<1..329)
                     /locus_tag="PXD69_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL6283833.1"
                     /translation="MTFTVDSYLEYFLTLLAWIINNNIFAVLVQTGLFVLPLIFVLIS
                     TWMEVKKQGEDEGNKGDLLITWLSLKFYPAMFVVVLVLAPMIPINLNNIELNVERSKA
                     CGYRVPTA"
     gene            complement(340..657)
                     /locus_tag="PXD69_001644"
     CDS             complement(340..657)
                     /locus_tag="PXD69_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL6283834.1"
                     /translation="MKSDTTKPKMTRVITVLKITLMIIGIILLLLVVGWLAMTYFPST
                     NFQAWFYETRYAWLGWRFVLYVAIWLLMVQLNRKGQMPLKARLMILSVIPIIEGLNLL
                     YLL"
     gene            complement(647..1075)
                     /locus_tag="PXD69_001645"
     CDS             complement(647..1075)
                     /locus_tag="PXD69_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283835.1"
                     /translation="MNKQHYRLFNAGPQKSSLGVVSPAVETQLLGFCEQIRQLIGVGK
                     QITLFPHRVVQNHWAIELSGEQGSVHLLLNVTGRSLLPTSNNSEWSARLIIEIADHVD
                     AYWFSAFLTQYLGLKSNLLPLSTSIADNSVYNEVIDNNEV"
     gene            complement(1075..3915)
                     /locus_tag="PXD69_001646"
     CDS             complement(1075..3915)
                     /locus_tag="PXD69_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer ATPase"
                     /protein_id="HDL6283836.1"
                     /translation="MMSFLSEVFSSFKPTKTEVISSEPNENSGESDIIQNKMSEVNNE
                     VQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLNEHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDVNPYVVQFYCQDSDDLQPYIEQLRNYIS
                     PIAKNSAFSEEWLRVQAKHFKDIGKPEGLFIDERVTNTAWSGRIRSTKMVIYRYVDKS
                     NDTNENLIVEQLNNACSRINGALTTAGLQLQRLDGEQFRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDDQPHEVVVVNNLRK
                     QPEVGLMTGEITRGRNINALFDLLPESTIMAITIVIHPQDKLEAHLEKISSRAVGENF
                     ESKYLKEDCQTVQSYLKEGHKLYQAAIAFYVRGKDEKELRTRSRQLRTILLSNNLEPV
                     KENAEIAPLNSYLRWLPMNFNPQMDAKSHYYTKYYFVQHLANLLPIFGRDTGTGNPGI
                     TYFNRGGAPFNFDPFNRKDRTKNAHKLLLGPTGSGKSATLCGQLCQAMAVYRPRTFVV
                     EAGNSFGLLADYAERFGLTVNRITLAPNSGIVLPLFSEAHRLLDMELNPEDVPEDIED
                     NDDTDDEGDMQRDLLAEMELTARLMITGGEKKEDEKMSRADRAAIRRAILNAARQTKS
                     EGRQTLTEDIKNALEALSHDEHTREERRTRLAEMAESLEMFCTGVNGQFFNREGAIWP
                     EADLTLVDLAMFAREGYEAELAISYISLINHINSLGEKYQHSDRMILNVTDESHIITA
                     NPLLAKFLVKGSKMWRKLGIWLWLATQNMDDFPNEAAKLLSMVEWWELLNVSASEIDE
                     INRFRKLSEAQKTMLLSAKKSDRKYTEGVVLATNMEALFRVVPPSLFLALGMTEKHEK
                     AERKQLMMQHGYTELDAALEVAARIDKARGIH"
     gene            complement(3915..4313)
                     /locus_tag="PXD69_001647"
     CDS             complement(3915..4313)
                     /locus_tag="PXD69_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL6283837.1"
                     /translation="MKALYCIMMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNND
                     LHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            complement(4326..4898)
                     /locus_tag="PXD69_001648"
                     /pseudo
     CDS             complement(4326..4898)
                     /locus_tag="PXD69_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
     gene            complement(4876..5382)
                     /locus_tag="PXD69_001649"
     CDS             complement(4876..5382)
                     /locus_tag="PXD69_001649"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283838.1"
                     /translation="MAYQTLKSTQSQTQEKSDERAKQLLGSRVVEQVSESERENGNGR
                     EISSGSRQTSNEQRTGYSGNSSQEYRQISKSGERLTNKTSENALIEPTRPIKNKNGSK
                     VAPTPTNTPKTQNNANSNLLSSEQYRQTMEFLREFNDRLEQIAQNILENQLKALRTKA
                     KPSHCQWY"
     gene            5402..5551
                     /locus_tag="PXD69_001650"
                     /pseudo
     CDS             5402..5551
                     /locus_tag="PXD69_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238497.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
     gene            5552..6145
                     /locus_tag="PXD69_001651"
                     /pseudo
     CDS             5552..6145
                     /locus_tag="PXD69_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001201005.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA--6-aminopenicillanic acid
                     acyl-transferase"
     gene            complement(6299..7114)
                     /locus_tag="PXD69_001652"
     CDS             complement(6299..7114)
                     /locus_tag="PXD69_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HDL6283839.1"
                     /translation="MSHIQRETSCSRPRLNSNLDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTALP
                     GKTAFQVLEEYPDSGENIVDALAAFLRRLHSIPVSNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
     gene            complement(7450..8286)
                     /locus_tag="PXD69_001653"
     CDS             complement(7450..8286)
                     /locus_tag="PXD69_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDL6283840.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(8286..9089)
                     /locus_tag="PXD69_001654"
                     /note="aph(3'')-Ib"
     CDS             complement(8286..9089)
                     /locus_tag="PXD69_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDL6283841.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            complement(9258..10103)
                     /gene="sul2"
                     /locus_tag="PXD69_001655"
     CDS             complement(9258..10103)
                     /gene="sul2"
                     /locus_tag="PXD69_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDL6283842.1"
                     /translation="MEYTSKSQIARNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQA
                     RKLMAEGADVIDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQ
                     AYALSRGVAYLNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHI
                     AAFFDARIAALTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLL
                     SVSRKSFLRALTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKE
                     TARIR"
     gene            10266..11558
                     /locus_tag="PXD69_001656"
     CDS             10266..11558
                     /locus_tag="PXD69_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HDL6283843.1"
                     /translation="MGTYIPHREGIIQTIVRNSLTQYQAYASPSQTILDRLEHFAECA
                     DWTKGVVRIRCHDCGHSYFRPFSCKVFHLCPSCDQKRTLLYAEYLAEDLLLDLPHRQF
                     VFTIPKILRPYFKSDKRLFGEVSRLVFSLLSDFFSLAAGQELLCACVVSYQSFGEFAR
                     FHPHWHVLVLEGGFTKYDRFVYLPIGADEGMLKVWQAAIMALFLRKELIDQARVNMLR
                     DWKHSGFSIESETRLFNKADREALGQYVVRGATCAEKIQYDPASDTIIWTASPKGFYK
                     GKTETFKGFEFVDQLVAHLPPRRVQLLRRYGVYAGKVRKQWQERPNIYSLAPESWQKG
                     HPRESKIVPAIPQEKPETVQVSDAWSKLRKQSWARLLQKVYEVDPFVCPKCQGTMSVV
                     AIIEDPKELAKIINWAKQQEREQPVAVCARSPPELALV"
     gene            11898..12155
                     /locus_tag="PXD69_001657"
                     /pseudo
     CDS             11898..12155
                     /locus_tag="PXD69_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            12624..13070
                     /locus_tag="PXD69_001658"
                     /pseudo
     CDS             12624..13070
                     /locus_tag="PXD69_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3363 domain-containing protein"
     gene            13347..14561
                     /gene="floR"
                     /locus_tag="PXD69_001659"
     CDS             13347..14561
                     /gene="floR"
                     /locus_tag="PXD69_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDL6283844.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSVLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLPIFASPAFWVYT
                     VGFSAGMGTFFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNSDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            14589..14894
                     /locus_tag="PXD69_001660"
     CDS             14589..14894
                     /locus_tag="PXD69_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6283845.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE"
     gene            15006..>16241
                     /locus_tag="PXD69_001661"
     CDS             15006..>16241
                     /locus_tag="PXD69_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDL6283846.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRV"
BASE COUNT         3945 a         4151 c         4058 g         4087 t
ORIGIN      
        1 gcagttggaa cacgataacc acaggcttta gaacgttcta cattcaactc aatattattc
       61 aggttgatcg gtatcattgg agctaagacc aatacaacga caaacatcgc cgggtaaaat
      121 ttgaggctga gccaagtaat aagtaaatcc cctttattac cttcgtcctc accttgtttt
      181 ttgacttcca tccacgtact gattaagaca aaaatgagag gcagaacaaa caaccctgtt
      241 tgaaccaata cagcgaaaat attgttgttg atgatccaag ccagtaaggt aagaaagtat
      301 tctaagtaac tatctacggt aaaggtcatc tcatcctcct taaagtagat acagtaaatt
      361 aagtccctca ataattggga tgacagataa aatcattaac ctggctttta atggcatttg
      421 cccttttcga ttaagttgta ccatcaatag ccaaatagct acatataaaa caaatcgcca
      481 tcccaaccag gcatagcggg tttcatagaa ccacgcttga aaatttgtgg aaggaaaata
      541 ggtcattgcc aaccagccaa caacgagtag taataaaata ataccgatga tcatcaaggt
      601 tatttttaat acagtaataa cccttgtcat tttaggcttt gttgtatcag acttcattat
      661 tatctattac ctcgttatac acagagttat ccgcaattga tgtggataag ggtaaaagat
      721 tacttttcaa accgagatac tgagtaagga atgccgaaaa ccaataagca tccacatgat
      781 cagctatttc aataattaaa cgagctgacc attcactgtt attggaagtt ggtagcaaag
      841 aacgccccgt cacattaagt aataagtgaa cagaaccctg ctcaccagaa agttcgatag
      901 cccagtgatt ttgcacgaca cgatgaggga ataaggtaat ctgtttccca acgccgatga
      961 gttggcgaat ttgttcacaa aatccaagca attgagtttc taccgctgga gatacaactc
     1021 ctaatgagga tttttgtggg cctgcattaa ataaacggta atgttgttta ttcattagtg
     1081 tattcctctt gctttatcaa tccgagctgc aacctctaaa gctgcatcga gttcggtata
     1141 gccgtgctgc atcatcagtt gcttacgttc tgctttttca tgtttttcag tcattcctaa
     1201 agctaaaaat aagctaggcg gtacaactcg gaatagagct tccatattcg ttgctaatac
     1261 cacgccctcg gtatatttac gatctgattt tttggcagat aacaacatcg ttttctgggc
     1321 ctctgacagt ttccggaaac gattgatttc atcaatttca ctggcagaca cattcaacaa
     1381 ttcccaccat tcgaccattg agagtaattt cgccgcttca ttcgggaagt catccatatt
     1441 ttgagtagca agccatagcc aaatccctag tttacgccac atttttgagc ctttaactag
     1501 gaatttagct aataatgggt tggccgtgat aatgtgtgat tcatctgtta cattcagaat
     1561 catccgatca ctgtgttggt atttttcacc aagactgttg atatggttaa tgagtgaaat
     1621 ataggaaatg gccaactctg cttcatagcc ttcccgggca aacatagcta aatcaactaa
     1681 ggttagatca gcctccggcc aaattgcccc ctctcgatta aaaaattgcc catttacacc
     1741 ggtacaaaac atttctaatg attctgccat ttctgctaaa cgggtacgcc gttcttcacg
     1801 agtatgctca tcatgactta atgcttccaa agcattttta atatcttcag tcagcgtttg
     1861 tctgccttca gatttggttt ggcgagctgc atttaaaatg gcacgacgaa tagcagcacg
     1921 atcagcacgg ctcatttttt catcttcttt cttttcacct ccggtgatca tcaaacgtgc
     1981 cgtcagctcc atttcggcca ataaatctcg ttgcatatca ccttcatcat cagtgtcatc
     2041 gttatcctca atgtcttccg gcacatcttc cgggtttaat tccatatcca atagacgatg
     2101 tgcttctgaa aagagtggta agacaatgcc gctgtttgga gctaacgtaa tgcgatttac
     2161 agtcagtccg aaacgttctg catagtccgc taataaacca aatgaatttc ctgcctcaac
     2221 aacaaaagtc cgtgggcgat aaacggccat agcctgacat aattgcccac ataacgtagc
     2281 tgattttccc gaaccggttg gacctaataa tagcttgtga gcatttttgg ttctgtcttt
     2341 acggttaaat gggtcgaaat taaatggtgc tcctcctcga ttaaagtaag tgatccccgg
     2401 attcccagtc ccggtatctc ggccaaagat aggtaataag tttgccaaat gttgtacaaa
     2461 atagtacttc gtgtagtaat gtgatttggc atccatctgc ggattaaaat tcattggtag
     2521 ccaacgcaaa tagctgttaa gtggggcaat ttctgcattt tccttcacgg gttctaggtt
     2581 gttactgagc agaatcgttc tcaactggcg agaacgggta cgtagctcct tttcatcctt
     2641 acctcgaacg taaaatgcaa tagctgcttg atagagttta tgcccctctt taagataaga
     2701 ctgtacagtt tgacagtctt cttttaggta tttcgactca aaattttcac ctaccgctcg
     2761 actactaatt ttttctaaat gtgcctccaa cttatcctgt ggatggatga cgatggtaat
     2821 tgccataatg gttgattccg gcaacaagtc aaataatgca ttgatattac gcccacgagt
     2881 aatctcgcca gtcatcaacc ccacttccgg ttgtttcctc aaattattga ctacaacaac
     2941 ttcgtgcggt tggtcatcaa aataccaata gttgccttca tttttcggtt gagaataaaa
     3001 taaatcttca ctgaaatcgt taaacgctaa ttctggaagc ccgtcatttg aggtttgttt
     3061 accaaaaaga tggtagcaat cattgttgct taacccctca aaattaatag aaggattggg
     3121 attaaaccaa cgtaacagcc attgacgaaa ttgttcgcca tccagtcgct gcaattgtaa
     3181 tccagcagtt gttagagctc catttatgcg agaacaagca ttgttcagct gctcgacaat
     3241 cagattttca ttagtgtcat tggatttatc aacataccga tagatcacca ttttggtact
     3301 acgtatacga ccagaccaag ctgtatttgt cactcgctca tcaataaaaa gcccctctgg
     3361 tttaccgata tccttgaaat gcttggcttg tacccgtaac cattcttcgc taaatgcact
     3421 atttttagcg ataggcgaga tataatttcg tagctgttca atataaggct gtaaatcatc
     3481 gctgtcttgg caataaaatt gaacaacgta cggatttaca tccaattcat caaagctgtc
     3541 ttgcaaggca tctttgacaa gattacgtat ccgacttaaa aattcaatac tacggccagc
     3601 agtaccaatc ggcttaatat caaatactgc cccaacacta cgggcatcat caaggagtat
     3661 cacaccgtgc tcattcaaat attctcccca aggtagatga tcgataaagg agggctcttg
     3721 tgagtataac cgacggtgat gctgtgactg ggtgagtttt ccactgcgtt ttaattgttg
     3781 aacctcgtta tttacctcac tcattttatt ttgaatgatg tcagactcac ctgaattttc
     3841 atttggttca cttgatataa cctctgtctt agtcggtttg aaagaggaaa atacctcact
     3901 taaaaaagac atcatcaaag ccctcttgtt cgatcacccg gttgagcata ttggactcgc
     3961 ccgtagaaag gtaataccgt agaatatcct ggaatactaa gaggctctcc ggaacgagtt
     4021 tggtgtggat acacatacat aatcagatcc ggattaggta aacgagggaa caagttatta
     4081 atttcatttt ctgccgtacg ggtataggct cgttgctcag tgttaggaat ataatcgaca
     4141 ggatcgagtg ttcgtccttg ttgtgaacgg tataagtgta gatcgttatt acctgctcct
     4201 ttatcccaaa tatctcgcat cgtactgccg ttagcgggta ataattcttc agttgaagtt
     4261 gtgcaacctg ttatcaataa ggcactcatc attatgcaat ataaagcttt cattgtttgt
     4321 tccttttaat caagttgtgt attagttgat gtgtttccgt atttcacttt acgtcctttg
     4381 gagttgtaat cgatctcaat ctctttctcg atatgaatag cgacacgatg tccaggtggt
     4441 acatagacag catcaaagtt ttcagcaaaa cgctttctaa accagtcggc ggattctttt
     4501 aaaccaccgc cgatggcttg ccctaagatg aacttacctt gatcaccggt aacagctcca
     4561 acaacactat tgccatcaac tactgtcgtt gtttgtgatt gtgaaaaccc ttgggctgcg
     4621 gcactggcag ccgctaagaa gaaatttgtg cctaaatatt ctggtgcatt tgtttttctc
     4681 tccccgggaa cacaaggaat gcctgaacta tcagataacc aaccgatatt ctcactattc
     4741 cctttgttag tcgtgctgac aatacgccca tcattgaaca caaaggtcat actttttaca
     4801 tcgcctcgta cacaagatag agtccagtcg ccagtagctg tacccgaaac aatcgcacct
     4861 tctacatcaa gtaattcaat accattggca atgagatggt ttagccttag ttctcaatgc
     4921 ttttagctga ttttctagga tattttgggc gatttgctcc aatcggtcgt taaattctcg
     4981 caaaaactcc atagtctgcc gatactgttc tgatgacaat agattagaat ttgcgttatt
     5041 ttgcgtttta ggcgtgtttg ttggtgtggg tgctacctta ctaccatttt tatttttgat
     5101 aggtcttgta ggctctatga gagcgttttc agacgtttta ttagttaatc tttcgcctga
     5161 ttttgatatt tggcgatatt cttggctaga attgcctgaa tatcctgtcc gctgttcgtt
     5221 gctcgtttgg cgacttcctg acgaaatttc tcgtccgttg ccattctctc gctcgctttc
     5281 gctgacttgt tcaaccactc ttgaacccaa gagttgtttt gctcgttcat ctgatttttc
     5341 ctgtgtctgt gattgtgtgg attttaaggt ttggtaagcc aaaacttgct cgttatacgc
     5401 caaggaggac acccggcgca aggtgctggt aggcgcgtgg atactcggca aggttgaaag
     5461 cggcgagtgg ccagaacagc gcctgctcga tgggttggat agctacctag agcgcgacca
     5521 tgatcgggcg ctgttcggac tgccacccaa ggggtcgatt tgcggccaca cctttgcggt
     5581 aaatgaaaaa ggtatcgtta acacggtgaa taacatccgt gcagtgtatc gtccgcaggg
     5641 attaccgcgt cagatcctgg ctcgcgcctc gctgaatgcg aacaccctcg acgaggccat
     5701 cactatactt accggccagc cgcgatccgg ggcgtttcac catacgctcg ggcagctggg
     5761 cgatgcgcgg ctgttcagcg ttgaggccac cggtcaaggc tgttccgttc tacccctgac
     5821 gacggtaacc gggcatgcca accatctggt gcatgcggca ctggctggcg ttgagcagat
     5881 cgttaccgac agttcagcgt cgcggcagtt acgcctcgtg cagtggcggg aaacgcaacc
     5941 tccgtttgac gccgcggcgg caaaaaccat tctctcagat acccatgacg cagaactgcc
     6001 aatttaccgg ctggctgccg acgatccgga tgaggagaac accctcgcca cggcagtttt
     6061 caccctcgat gccaaccacg tcaggtggca aattttcgac attaaccgcg acgatgctaa
     6121 atttcatgga gaagtgcgtg ggtgaaatag ccggtcgtca gtcataaagg gcaggggagt
     6181 accgttggcc cggcgttcga tagtaccgtc cggatactgc cagatatcgg cgtccaggga
     6241 gatgtcctga agcgcggtgt ccggaatttc aggtttgtgt ctctacaaag actaactatc
     6301 agaaaaactc atcgagcatc aaatgaaact gcaatttatt catatcagga ttatcaatac
     6361 catatttttg aaaaagccgt ttctgtaatg aaggagaaaa ttcaccgagg cagttccata
     6421 ggatggcaag atcctggtat cggtctgcga ttccgactcg tccaacatca atacaaccta
     6481 ttaatttccc ctcgtcaaaa ataaggttat caagtgagaa atcaccatga gtgacgactg
     6541 aatccggtga gaatggcaaa agcttatgca tttctttcca gacttgttca acaggccagc
     6601 cattacgctc gtcatcaaaa tcactcgcat caaccaaacc gttattcatt cgtgattgcg
     6661 cctgagcgag acgaaatacg cgatcgctgt taaaaggaca attactaaca ggaatcgaat
     6721 gcaaccggcg caggaacgct gccagcgcat caacaatatt ttcacctgaa tcaggatatt
     6781 cttctaatac ctggaatgct gttttcccgg ggagcgcagt ggtgagtaac catgcatcat
     6841 caggagtacg gataaaatgc ttgatggtcg gaagaggcat aaatgccgtc agccagttta
     6901 gtctgaccat ctcatctgta acatcattgg caacgctacc tttgccatgt ttcagaaaca
     6961 actctggcgc atcgggcttc ccatacaatc gatagattgt cgcacctgat tgcccgacat
     7021 tatcgcgagc ccatttatac ccatataaat cagcatccag gttggaattt aatcgcggcc
     7081 tcgagcaaga cgtttcccgt tgaatatggc tcataacacc ccttgtatta ctgtttatgt
     7141 aagcagacag ttttattgtt catgatgata tatttttatc ttgtgcaata taacataaga
     7201 gattttgaga cacaacgtgg atttgttgaa taaatcgaac ttttgctgag ttgaaggatc
     7261 agatcacgca tcttcccgac aacgcagacc gttccgtggc aaagcaaaag ttcaaaatca
     7321 ccaactggcc cacctacaat aaaggggtcg tttgcgggag agggcgaaat cctacgctaa
     7381 ggctttggcc aacgatattc tccggtaaga ttgatgtgtt cccaggggat aggataagtc
     7441 gcttgatatc tagtatgacg tctgtcgcac ctgcttgatc gcggccgcga tagctagatc
     7501 gcgttgctcc tcttctccat ccgcgttcca agctgcggaa aggcacccat aagcgtacgc
     7561 ctggtcgagc aggcgacgcg gatcgacgtc cagcgcacga gagaatgcgt ccgccatctg
     7621 tgcaatgcgt ctaggatcga gacaaaggtc gtctctgtca gccggatcgt agaacatatt
     7681 ggcggcgcca aagcccactt caccgaccag accgacggga tctatcacca gccagccgcg
     7741 actggagaac atgatgtttt catgatgcag atcgccatgt agcccacgca gttccgaggc
     7801 attgctcatc atttgatcgg ctataatcgc cgcgtggacg tagtcagttt gacaacctgc
     7861 gttttgatca tcgcgcgccc gctgaaacaa agctgcaaag cgatcccgga tcgggagaag
     7921 ggcagaaggc aggggttcct cagatgcggc atacagcttc gccatcagtt ccgctgcaat
     7981 ttcggtcgcc tggtagtcgc cgtgctcggc aacgatgtga gagagcattc gctccccggc
     8041 atattcgagc aacatcagat tgttctcacg accgagcaac cggactgctc ccctcccatt
     8101 gcgccatacc agatagtcgg ccccgcgcag ttcatcagca atgtcttcta taggtttcaa
     8161 tcccttgacg attgcaggag tcccgtctgg caatgaaact ttccaaacga ggctggaaaa
     8221 ggtgtccgca atgagaacag gttgcgaaac gtgccaatga gcaggaaaaa caggcggcat
     8281 gaacatcaac cccaagtcag agggtccaat cgcagataga aggcaaggcg ttcgcggtcg
     8341 ggggcttcga tccccaatac attgaatagg acagcgaagg cgcgctctgc ttcatctggc
     8401 gctgcccagt tctcttcggc gttagcaatc atgagtgcca aatcggcata gcgatctgct
     8461 gttccgagcc gcccaaggtc gatcagaccc gtgcattgaa gagttttagg gtccaccatg
     8521 aagttcggca tgcagggatc accatggcaa acaaccatat cggtgcgctc ttggtcgagc
     8581 cgcaccggta gctctcgttc gacacgagcc aaaagatcga gctgcggcgt actcttgtcc
     8641 tcgtccggta agaagtcggg attgacggca ttgcgggaca ccacatcaac ggcgcgtccg
     8701 aacattcgcg acagcctgcg ctcaaacgga cattgatcaa ccgataggct gtgaacagcg
     8761 ccaagttgct gccccattga cggccacgct ttgagcaaat ccgctccaga cagatcagcc
     8821 gccggtactc ccggaattgc cgttatcacc aagcatgcac cctcctgttc ctcctgccag
     8881 ttgatcacct cggggcaagc cacacctcga cctttgagcc aaatgaggcg gtcacgctct
     8941 ccagcgagct caccgcggcg ggaagcaggt gcgattttcg cgaaggcatg cccgtcacca
     9001 cgtcgaaaaa caaaatcacc ggattctccg cctctgacag gcaaccagtc agaatgcgat
     9061 tcaccaaaaa aaatattagt tcgattcaat ggaggttcct tcagttttct gatgaagcgc
     9121 ggaggtggct ttgccacgaa taccatctgt gccgaaatat ttgcgcacca taaggtcgat
     9181 tatcctgtcg tcgggtcgcc ctcaaagggg acatgcctgc tgaaccgcga atatagagaa
     9241 atatcccgaa tgtgcagtta acgaattctt gcggtttctt tcagcgccgc caataccgcc
     9301 agcccgtcgc gcaaggggcg cggctcgtgt gtgcggatga agtcagctcc acctgcggcg
     9361 gcggcaagct ctgcagcgag tgtcgcggcc ccgacatccc ccggaccacg gcctgtgagc
     9421 gcgcgcagaa aggatttgcg cgaaacagac agaagcaccg gcaaatcgaa gcgcagccgc
     9481 aattcatcga accgcgccag caccgagagc gaggtttcgg gagcagcccc cagaaaaaac
     9541 cccatgccgg gatcaaggac aaggcggttg cgtttgatac cggcacccgt cagcgccgcg
     9601 atgcgcgcgt caaagaacgc cgcaatgtga tccatgatgt cgccagcggg tgcctcgcgc
     9661 cgatctgcct gcccgtcttg caccgaatgc ataacgacga gtttggcaga tgatttcgcc
     9721 aattgcggat agaacgcagc gtctggaaaa ccgcggatat cattgagata ggccacacca
     9781 cgcgacaagg cataggcttg cgtcgcgggt tgataactgt cgagcgagac gggaatgcca
     9841 tctgccttga gcgcgtccag caccggcgcg atacgcgcga tttctgtgtc ggacgaaaca
     9901 ggcgcggcgt cgggattgct ggatgccgga ccgaggtcga tcacatctgc cccctcggcc
     9961 atcagcttac gcgcctgcgc aatggctgcg tctggcgcca gataccggcc tccatcggag
    10021 aaactgtccg aggttatgtt gacgatgccg aaaatgatga gcgatttatt tcgagctatt
    10081 tgtgatttac ttgtatattc cattttcctc cgcgccgaag gcgtcaacct aactttcggt
    10141 tgagctgcga acgggcttgt cccgtgagtc cgctcgaacc ggttgttagg tggcgccagt
    10201 ccacattttc cattattttc ttcgcaattg caagcaaatg atcgttttcc tgcgtatgta
    10261 taggtatggg aacttacatt ccccatcggg aagggataat ccagaccata gtccgcaatt
    10321 ctctaaccca gtaccaagcc tacgcaagtc catcgcaaac tatccttgac cgccttgagc
    10381 attttgctga atgtgccgat tggaccaagg gtgttgttcg aatacgttgc catgattgtg
    10441 gacattcgta cttcaggcca ttttcgtgca aggttttcca cctttgccca tcctgtgacc
    10501 aaaaacggac cttactctat gctgaatacc tggccgagga tttgctcctt gatctaccgc
    10561 atcggcaatt tgtttttacg attcccaaga ttctcagacc atactttaaa tcggataagc
    10621 gactgtttgg cgaggtgtcc aggctggtat tctccttgct ttctgatttt ttctccctgg
    10681 cagccggtca agaactacta tgtgcctgtg ttgtcagcta tcagtcgttt ggtgaattcg
    10741 ctcgattcca cccgcactgg catgttctgg ttctggaagg tgggttcacc aagtacgacc
    10801 gctttgtata tttaccaatt ggagccgacg aagggatgct caaggtctgg caagcagcga
    10861 ttatggcttt gtttctgcga aaggaactaa tagatcaagc ccgagtgaac atgctcagag
    10921 actggaagca ttccggcttt agcatcgaga gcgaaaccag actattcaac aaggccgatc
    10981 gagaagccct cggccagtat gtcgttcgcg gcgctacctg tgcagaaaaa attcagtatg
    11041 atccagcttc cgacacgata atctggacag ctagcccaaa gggattctac aaaggaaaaa
    11101 cagagacctt caaaggcttt gaattcgtcg accagcttgt ggcccattta ccaccaaggc
    11161 gggttcaatt gcttcgtcgc tatggcgtat atgcgggcaa agtccgcaag cagtggcaag
    11221 agcgccccaa tatttatagc ctggccccag aaagttggca aaaaggtcat ccacgcgaat
    11281 ccaaaattgt tccagccata cctcaggaga aaccggaaac tgtccaagtt tccgatgcct
    11341 ggtccaagtt gcgcaaacaa agttgggcac ggttgttaca gaaagtctat gaagttgacc
    11401 cgtttgtttg cccaaaatgc cagggaacaa tgtcggttgt ggcgataatc gaggatccca
    11461 aggagcttgc caagattatt aactgggcaa agcagcagga acgggagcag ccagtggccg
    11521 tctgtgctcg ttcacctcct gagcttgctt tggtgtaggt ataataccca aaaacgaagt
    11581 ttatgcggaa caggataaca cctcgaaatc ggagtttata tggcttcgtg ggggagttat
    11641 gtgtttgagc tttgtcgcat taacgcgaat caggggttga cggcagaaat agactggaat
    11701 tacacttctt ggagtcggcg ttgccggaaa attctgattg gattagttgt tcggggtgcg
    11761 aaaacagtcg tagttcgggg aaaaaaccga attttgaccc gaaaccgcaa aaaacccgaa
    11821 atgacagttc ctataattta tttatttggg ggcgtgcacc tgtagcctta gcgactttaa
    11881 atgacagttc ctataattct gatgaaccgg caacaccagc acaacggcga gcgtcgatga
    11941 catgggcgca acggctcaag cgtgttttca atatcgacat cgagacctgc agcggctgcg
    12001 gcggcgccat gaaagtcatc gcctgcattg aagaccctat agtgatcaag cagatccttg
    12061 atcacctgaa gcacaaagcc gaaaccagcg ggaccagggc gttacccgaa agccgggcgc
    12121 caccggctga gctgctcctg ggtctgtttg actgacgagc ctgaaggcca acgataccaa
    12181 tcaaaatgct gcgttcacag cgccgcggca gggatccgcc gtgctggttg tcggaaaagg
    12241 agccgctagt gggaaagagg agggtaaatt ttcagcgttg ctggctcccc gtcagccgga
    12301 ttgggttgca tcgcaggggt gtcgaaagag tcaactgcgg tccaaagctg ttggacttgg
    12361 gtgaaaaggg cgtttattct tcctatacgt gccgcgttcc aggcggcgac tatgagggct
    12421 atgtcgatgc ccatgtgcgc cggctggagg cgctacgccg ggccggtatc gtcgagcgga
    12481 tcgacgccga ccaatggcgc atccccgatg atctggtcag ccgtgccgcc gcccatgacg
    12541 ccggccgaga cagtcaggcc agcgttcgcg tcctttcccc ggtcgatctg aacaaacaga
    12601 tcggatcgga cggcgcgacc tggctggacc ggcggctgat ccacggcgag acggccgacc
    12661 ttgcgccaac cggcttcggg caacaagtcc gcgaagccat ggaccagcgc cgcgagcacc
    12721 atatcgaaca gggcgacgcc acccgcagcc gggacagccg cgtcttctac cggcgcaacc
    12781 ttctcgccat cctgcgggag cgcgaggtag ccggcgtcgg atcggatatg gctttgagta
    12841 agggcctgcc gttccgcgcc gccacggacg gcgagagcgt cagcggcaag tttaccggaa
    12901 ccgtgcatct atcgagcggc aagttcgccg tggtcgagaa atcccatgag ttcacccttg
    12961 tcccgtggcg gccgatcatc gaccgccaac tcggccgcga ggttatgggc atcgtgcagg
    13021 gcgggtcggt gtcgtggcag ttagggcggc agagggggct ggaacgctga gtgcgcccat
    13081 gccgcattgc gaagcaaaag ataatcggat aaaatgtagc aattcatatt cgtaagcgtg
    13141 gagtaatcag atgggaaatt ccaagtcagc agacaagtaa gccgcaacaa ccagtattgt
    13201 tgttgcggcg ctctgtaagg ctagtctcat ctgattgctg acgagcagac gtcgcccggt
    13261 attccttaat cgagggttga ttcgtcatga ccaccacacg ccccgcgtgg gcctaaacaa
    13321 atatcaatcg caaggagatc atattcatga ccaccacacg ccccgcgtgg gcctatacgc
    13381 tgccggcagc actgctgctg atggctcctt tcgacatcct cgcttcactg gcgatggata
    13441 tttatctccc tgtcgttcca gcgatgcccg gcatcctgaa cacgacgccc gctatgatcc
    13501 aactcacgtt gagcctctat atggtgatgc tcggcgtggg ccaggtgatt tttggtccgc
    13561 tctcagacag aatcgggcga cggccaattc tacttgcggg cgcaacggct ttcgtcattg
    13621 cgtctctggg agcagcttgg tcttcaactg caccggcctt tgtcgctttc cgtctacttc
    13681 aagcagtggg cgcgtcggcc atgctggtgg cgacgttcgc gacggttcgc gacgtttatg
    13741 ccaaccgtcc tgagggtgtc gtcatctacg gccttttcag ttcggtgctg gcgttcgtgc
    13801 ctgcgctcgg ccctatcgcc ggagcattga tcggcgagtt cttgggatgg caggcgatat
    13861 tcattacttt ggctatactg gcgatgctcg cactcctaaa tgcgggtttc aggtggcacg
    13921 aaacccgccc tctggatcaa gtcaagacgc gccgatctgt cttgccgatc ttcgcgagtc
    13981 cggctttttg ggtttacact gtcggcttta gcgccggtat gggcaccttc ttcgtcttct
    14041 tctcgacggc tccccgtgtg ctcataggcc aagcggaata ttccgagatc ggattcagct
    14101 ttgccttcgc cactgtcgcg cttgtaatga tcgtgacaac ccgtttcgcg aagtcctttg
    14161 tcgccagatg gggcatcgca ggatgcgtgg cgcgtgggat ggcgttgctt gtttgcggag
    14221 cggtcctgtt ggggatcggc gaactttacg gctcgccgtc attcctcacc ttcatcctac
    14281 cgatgtgggt tgtcgcggtc ggtattgtct tcacggtgtc cgttaccgcg aacggcgctt
    14341 tggcagagtt cgacgacatc gcgggatcag cggtcgcgtt ctacttctgc gttcaaagcc
    14401 tgatagtcag cattgtcggg acattggcgg tggcactttt aaacagtgac acagcgtggc
    14461 ccgtgatctg ttacgccacg gcgatggcgg tactggtttc gttggggctg gtgctccttc
    14521 ggctccgtgg ggctgccacc gagaagtcgc cagtcgtcta accgacgact ggtagcaggc
    14581 ccgctccgat gcggcgcact aaccatcgaa acctcgtgaa tgtcggtatc ctgtctggca
    14641 ggataccgct catttccctt gttcagttca tcgccgtcgc cgagcatctg aattttcggc
    14701 atgcggccaa ggcacttggt atcagccagt cgagcgtcag cgcgcgtgtg aaagcgctgg
    14761 aggataacct tggtgtcctg ctatttgagc gccatgcgcg gggcgttcgg ctaacagacg
    14821 caggcaggca cttcatggag cgtgtcacgg cgggtgtcga tcaactcgat cacgcagtga
    14881 agaccgcgga gtgacgggca ctggctggca atgtctagca acggcaggca tttcggctga
    14941 gggtaaaaga actttccgct aagcgataga ctgtatgtaa acacagtatt gcaaggacgc
    15001 ggaacatgcc tcatgtggcg gccaggacgg ccagccggga tcgggatact ggtcgttacc
    15061 agagccaccg acccgagcaa acccttctct atcagatcgt tgacgagtat tacccggcat
    15121 tcgctgcgct tatggcagag cagggaaagg aattgccggg ctatgtgcaa cgggaatttg
    15181 aagaatttct ccaatgcggg cggctggagc atggctttct acgggttcgc tgcgagtctt
    15241 gccacgccga gcacctggtc gctttcagct gtaagcgtcg cggtttctgc ccgagctgtg
    15301 gggcgcggcg gatggccgaa agtgccgcct tgctggttga tgaagtactg cctgaacaac
    15361 ccatgcgtca gtgggtgttg agcttcccgt ttcagctgcg tttcctgttt gccagccggc
    15421 ccgagatcat ggggtgggtg ctgggcatcg tttaccgcgt cattgccacg cacctggtca
    15481 agaaagcggg ccatacccac caagtggcca agacgggcgc ggtcaccctg atccagcgtt
    15541 ttggatcggc gctcaatctg aatgttcact tccacatgct gtttctcgac ggtgtgtatg
    15601 tcgagcaatc ccacggctca gcgcgtttcc gctgggtcaa ggcgccgacc agcccagagc
    15661 tcacccagct gacgcacacc atcgcccacc gggtgggtcg ctatctggaa cggcaaggcc
    15721 tgctggaacg ggatgtcgaa aacagctatc tggcctcgga tgcggtggat gacgacccga
    15781 tgacacccct gctggggcac tcgatcactt accgtatcgc tgtcggttca caggcggggc
    15841 gaaaggtgtt cactttgcaa actctgccga ccagtggtga tccgttcggt gacgggattg
    15901 gcaaggtagc cgggtccagc ctgcacgccg gcgtggcggc cagggccgat gaacgcaaga
    15961 agctcgaacg gctgtgccgg tacatcagcc gcccggcggt atccgagaag cggctgtcgt
    16021 taacacgagg cggcaacgtg cgctaccagc tcaagacgcc gtaccgggac ggcaccacgc
    16081 acgtcatttt cgaaccattg gatttcattg caaggctggc cgccctggta ccgaagccca
    16141 gagtcaacct aacccgcttc cacggggtgt tcgcacccaa cagtcggcac cgggcgttgg
    16201 tcacgccggc aaaacggggc aggggcaaca aggtcagggt g
//
LOCUS       DANLXO010000063        16230 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.063, whole genome shotgun sequence.
ACCESSION   DANLXO010000063 DANLXO010000000
VERSION     DANLXO010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16230
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.063"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..262
                     /locus_tag="PXD69_001662"
     CDS             <1..262
                     /locus_tag="PXD69_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283847.1"
                     /translation="YSASDKERREFIAKHFAEETVRSDRNTPYDYAMCTGRMFAKQLT
                     RDEVKDYPLANTKPQYLTRDRRIEIMSNLPREILQNCAKYIQ"
     gene            complement(298..1050)
                     /locus_tag="PXD69_001663"
     CDS             complement(298..1050)
                     /locus_tag="PXD69_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDL6283848.1"
                     /translation="MAYKPPFTVTTKMLNLVVEISHKLGTLQLDFERNLHLRKNNRLR
                     SIQASLAIEANSLTIEQVTAIIKGKKVLGHPKDIREVKNAYDAYDEMMHYNPYSIKDF
                     LKAHKFLTADLVNDAGAFRSKDVGIYNFSGQLVHMGARPQFVENLINELFSWAKQDDT
                     PALIKSSVMHYEIEMIHPFSDGNGRMGRLWQNVLLAQWNPLFAWLPIETMVYENQQRY
                     YQMLSLADSQNDSTGFIEFMLEMILETLLKLK"
     gene            complement(1089..2336)
                     /gene="clpX"
                     /locus_tag="PXD69_001664"
     CDS             complement(1089..2336)
                     /gene="clpX"
                     /locus_tag="PXD69_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HDL6283849.1"
                     /translation="MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHG
                     EEEPLIDENQDDEGSFFTNVPTPHELHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRSA
                     LSNHQATNGVELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGE
                     DVENVIQKLLMKCDFEAEQAERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKL
                     LEGTVANINPQGGRKHPKGETIPVDTSKILFICGGAFAGLDKIVEARTNTQGGIGFAA
                     ALKKDKDRQDLTELFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPK
                     NAIIKQYQALFEMEGVELHFTKDALISIAQKAISRKTGARGLRSIVENLLLDTMYDLP
                     TLNAKKVTIGKGCVENGDKPKVE"
     gene            complement(2336..2929)
                     /gene="clpP"
                     /locus_tag="PXD69_001665"
     CDS             complement(2336..2929)
                     /gene="clpP"
                     /locus_tag="PXD69_001665"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDL6283850.1"
                     /translation="MALVPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLI
                     VAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAF
                     LLSAGAKGKRFALPHARIMIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHSGQ
                     SYEKVLADTERDNFMSAEEAAEYGLIDKVLTSRSEVA"
     gene            3041..3424
                     /locus_tag="PXD69_001666"
     CDS             3041..3424
                     /locus_tag="PXD69_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HDL6283851.1"
                     /translation="MTLTEIYQKFERCKSWEERYRLLIQLSRLLPKPSEQELAQIAEI
                     EGCESRLWFEFQAEPRKVVAYSDARLMQGILFIVSVALTEKTAEELKGFDLKTMFDEL
                     KISQNLTSTRLNGLGQLQKHIMMNL"
     gene            complement(3528..3604)
                     /locus_tag="PXD69_001667"
     tRNA            complement(3528..3604)
                     /locus_tag="PXD69_001667"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3568..3570),aa:Asp,seq:gtc)
     gene            complement(3693..4448)
                     /locus_tag="PXD69_001668"
     CDS             complement(3693..4448)
                     /locus_tag="PXD69_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6283852.1"
                     /translation="MKKSIYDTPIFFERYQQLRQNPISMNEVVEKPTMFSLLPDLTGK
                     KVLDLGCGTGVHLAHYLTLGAEKVVGLDLSELMLQQAESDLSAHWQKGNDFSLYCLPM
                     ERLNEISEGDFDVVTSSFAFHYIADFSELLAKISQKMTACGTLIFSQEHPIVTCYREG
                     YRWEKNQEKQQVAYRLNYYREEGERDRSWFQQPFKTYHRTMATIVNNLIQGGFEIVQM
                     EEPMLAGQPRWHNEFKDLQHRPPLLFIKAIKQK"
     gene            complement(4508..5503)
                     /gene="trpD"
                     /locus_tag="PXD69_001669"
     CDS             complement(4508..5503)
                     /gene="trpD"
                     /locus_tag="PXD69_001669"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDL6283853.1"
                     /translation="MQALLDKLFANQALAQAESHRFFSEVIKGNVSNEQLAAALIALK
                     LRGETVDEIAGAAKAALENANPFSTPDYPFADIVGTGGDGHNTINISTTSAIVAATMG
                     YKIAKHGNRSVSSKTGSSDVLSHLGINVDVSPETARLALDETNICFLFAPTYHSGFKY
                     AAPVRQALKTRTIFNILGPLVNPAHAKRQLLGVYSPELVKVYAETVKALGYEHTIVVY
                     GAGLDEVAVHGETQVAEIQNGQIDYYTLTPEDFGIERHSLEDLKGGEPAENAEKVTAI
                     LQGKGKLAHIDAVAANVALLMKTFGEDDLKANVQKVKETLESGKALETLRKLSTY"
     gene            complement(5521..5907)
                     /locus_tag="PXD69_001670"
     CDS             complement(5521..5907)
                     /locus_tag="PXD69_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005543439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDL6283854.1"
                     /translation="MISVYGLKQTLADRRALIADVIFDCMQMSLGVPKQRHALRFDLL
                     DAENFYPPINRSQDFIVIEINLMQGRSEQLKKRLIKGLFSALHTKVGIVPMDVEITIK
                     EQPEHCWGFRGMTGNEATDLEYQAHR"
     gene            complement(5900..6490)
                     /locus_tag="PXD69_001671"
     CDS             complement(5900..6490)
                     /locus_tag="PXD69_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDL6283855.1"
                     /translation="MANILFIDNFDSFTYNLVDQFRELGHQVTIFRNDYPLEDFLAKA
                     ETTENCLVALSPGPGNPAEAGNLLEIIRRLKDKVPMIGICLGHQALIEAFGGKVVHTG
                     TVLHGKVSRIEHDNQAMFSGINNPMLVARYHSLMGDELPAEFIVNAKFEHIVMAIRHK
                     TLPICGFQFHPESILTVQGTKLLKQSVEWLLGEKND"
     gene            complement(6500..8056)
                     /gene="trpE"
                     /locus_tag="PXD69_001672"
     CDS             complement(6500..8056)
                     /gene="trpE"
                     /locus_tag="PXD69_001672"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDL6283856.1"
                     /translation="MPQLTITQTELPYFADTTRVYYALCGERPHTLLLDSAEIQSKNS
                     VKSLLFAKSAVHIFCEDQTVTFHALTPNGEAVLPLIANALSLLNPAPTCKFLDKNDRL
                     QAIFPTISNQLDEDSKLKTTTVFDGLRTVSQLFADSTSPIYLGGLFSYDLVANFIPME
                     NISLQDDGLSCPDYTFYLAEQLVTIDHQTETAVLNTFCFEPNEQTNLNQQAVEFTQKL
                     ANLSHIELPLANQTATSEATANIEDEDFKAIIRKLKHHINIGDVFQIVPSRRFSLPCP
                     NTLASYKQLKINNPSPYMFYMQGENFTLFGASPESALKYSQANRQLEIYPIAGSRPRG
                     FDEQGNIDPELDSRLELELRLDQKELAEHLMLVDLARNDVARVSESGTRRVVDLMQID
                     RYSQIMHLVSRVIGTLRKDLDALHAYQACMNMGTLTGAPKIKAMQLIYQVEQQKRHSY
                     GGAVGYLTSDGNLDTCIVIRSAFVQNGIAYVQAGCGEVLDSDPQLEADETRHKARAVL
                     KAIGQVNAKA"
     gene            8198..8815
                     /locus_tag="PXD69_001673"
     CDS             8198..8815
                     /locus_tag="PXD69_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDL6283857.1"
                     /translation="MTQFFYIHPDNPQQRLINQAVEIIRNGGVIVYPTDSGYALGCAM
                     GDKHAMDRIVAIRKLPENHNFTLVCSDLSELSIYALVNNQAYRLIKNNTPNPYTFILP
                     ATKELPRRLMTKRKTVGIRVPDNAIALALISALGEPILSCSLMLPETEMTESDPDEIR
                     DHLQNRVDLIIHGGYLGQQPTTVVDLTDDVPVIIREGSGDPTSFN"
     gene            8961..10028
                     /gene="rluB"
                     /locus_tag="PXD69_001674"
     CDS             8961..10028
                     /gene="rluB"
                     /locus_tag="PXD69_001674"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HDL6283858.1"
                     /translation="MTTFQKKSTATFRADKRGESRPSFKKEEQKSERKFGKTSEKPPR
                     PTSKPLTQRIAKKVEKTTASEVASQEKKAKVVGEKLQKILARAGQGSRRELEEIIAAG
                     RVSVDGKMATLGDRVQVSSSTKIRIDGHLVNLMPAQKEICRVLMYYKPEGELCTRSDP
                     EGRSTVFDRLPRLSGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVR
                     VFGNIDDAMLQRLRKGVQLEDGPANFKQIKVVGGTGLNQWFDVTLTEGRNREVRRLWE
                     SQGVEVSRLIRIRYGNIKLDKGLPRGGWEEMGLEQVNYLRELVGLPPETETKVEVGVN
                     RRRTNIRQIRKAVKQHQKYRG"
     gene            10094..11866
                     /locus_tag="PXD69_001675"
     CDS             10094..11866
                     /locus_tag="PXD69_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDL6283859.1"
                     /translation="MSWDIVATLAVTGIAVFLFATEKMRMDVVAILVLCSLVLLGQVD
                     TKSALSGFSNSATVTVTAMFVLAAGLQNSGALDSVGSLLAKVKSPWLFLLVLCGVNAA
                     VSPFVNNTAVVAVLIPIVIAAAQNIKMAPSKALIPLSFSSQMAGVCTLIGTSTNLLVN
                     AIAQKQGHSGFGMFEFAPLGIIFLVVGVAYLLVTSRFLLPESHLQLEDGEGFGKYVSE
                     LKVNKDSVLIGKSTFESGLNEEFNLFTIGVLRDGERLSTPSHQVLQKHDILLLRGESE
                     NLAKVREKYGLHHVVYGRRENDEDNLDEDLMVAEVMISPISRWIGGTIPILQQRWNKN
                     ATVLGIQRQSKVIRERLRTTAFKMGDILLLTLPKEDMETLRQDKDFIVLSSDLVKTEE
                     SWKSKFALGVMVLVVATAALGWVPISVSALIGAVAMCVAGCLTAEEAYQSIDWKIILV
                     LAGLLPLGEAMANSGAAQFIVDNTLGKVGEFGPLVVLAVLYLLTMVLTEFMSNAGTAV
                     LLTPIAVSTAKMLGVDASPFIIAVMFAAATSFMTPVGYQTNTMVYGAGGYKFTDFIKI
                     GLPLNVIYWILGIVLIPIFFPFNP"
     gene            complement(11956..16107)
                     /locus_tag="PXD69_001676"
     CDS             complement(11956..16107)
                     /locus_tag="PXD69_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL6283860.1"
                     /translation="MNKIYRIVWNHAKRTWIVASELSRSANKSNATNTSLTTNIIKLS
                     TLSLALSAGFASAATYSPTYGTIPDNNPQTSIAIGDGSKVNSTLVSTITGLEGNSGKV
                     STALGYNTTATADFSTALGGFANASFASTAVGGQATADKRSVAVGYNATAMGLREVFI
                     GDHAGLNHSNSTEYNIGIGYSASSNVTGNNTISIGNTAGDGTSGSHNIAIGTYANAKL
                     AGPTTNVTSDDNIAIGNSALANGVNNYKTTAATGETVIGKATAVGSHANATGIVSSAY
                     GAEANATAIHSTAIGAKSQANGDNSTAIGYEAKTSGHGATSLGYYANATANLTTAVGT
                     NAGATSDYASAFGREANASGGSATALGNRATASGAASVALGVSAKATNQRTIAIGESS
                     NASAFNATAIGRNATAEHTDSIALGSNSVTAIAIPTTNATVNGITYSDFAGTNPIATV
                     SIGAEGKERTITNVAAGRISLSSTDTINGSQLYLTQQAIGNVAATTANILGGGAAVTE
                     NGNITFPTYALVNGTPDADKEGKQGRYTTVSAALSALNTAVISPLTFAGDTGTNFERH
                     LGSTVKIKGGSTGILTENNIGVVADGNSTLTIKLAEKVNLGANGSLTTGDTVVNNTGI
                     TIANGVADKPVSLTKSGLDNGGNKIANVAAGDVDTDAVNVSQLKQAISKFATHYVSIS
                     DDGIQRANYDNSGSSGVNPMAIGVATSANGELATALGSEAEANGERTTAVGPRATADG
                     MNATSIGYNANANATNALAVGSAANANADTSTAIGTASTATATRATALGSKSEATGEN
                     STAVGYEASSIGADSLAAGYNANASGTQSTALGNSANAGGIWSTSVGRNANAAGSSAI
                     ALGNSANAAGVASIALGVSSQATTTAAVALGQNAKATHQGSVALGTNSETVATVATKS
                     ATLNGNTYTFAGTTPSSTVSIGSVGNERTLTNVAAGRILDSSTDAINGSQLYAAYTEI
                     DGLNTKVNELSNGALTFVDDAGTEIVRKLGTSLNVKGGADATILTDNNIGVVATDANT
                     LTVKLAKDIDLTPAGSVAVGNSKLNNNGLTINNGPSVTMTGVDAGKLKITNVADGDIS
                     PISADAVNGSQLYDTANTIATALGGNSSVNANGAVSAPSYTVVDGAPTNEVSKTVNNV
                     GSAITALNDAVTSPLTFAGDTGTPSQRKLGSTVTVKGGVSNESQLTDNNIGVISNGNG
                     SLTVKLAKDIKVNSVTAQTVTANIAVADTVKTGDTTIDTNGLTIVGGPSITKTGINAA
                     GTKVTNVKAGTEDTDAVNFSQLKATEKNINNKINNIDSKVNKVDKRLRAGIAGATATA
                     GLPQAYLPGKSMLATAGDTYRNEAAIAVGYSRISDNGKVIYKLTGNSNTRGDFGGSIG
                     MGYQW"
BASE COUNT         4468 a         3299 c         3475 g         4988 t
ORIGIN      
        1 gtactcagct tcagataaag agcgaagaga atttatcgca aaacattttg cagaagaaac
       61 agtaagaagt gatagaaata caccgtatga ttatgctatg tgcactggta gaatgtttgc
      121 taaacaactg actcgagatg aagtcaaaga ctaccctttg gcaaacacta agccgcaata
      181 tttaacccgt gatagacgga ttgagattat gtctaattta cctcgtgaaa tattacaaaa
      241 ttgtgctaaa tacatacagt aattttatga gtaacaccac tttggaatta agtggtgtta
      301 ttttaatttt aataatgtct ctaaaatcat ctccaacata aactcaataa agccggtaga
      361 atcattttgg ctgtctgcga gagaaagcat ttgataataa cgttgttgat tttcgtaaac
      421 cattgtttca atcggcaacc aagcgaaaag tgggttccat tgtgctaaaa ggacattttg
      481 ccataatcga cccattctgc cgtttccatc actaaagggg tgaatcattt ctatttcata
      541 gtgcataacc gagcttttaa tgagtgcagg tgtatcatct tgtttagccc aagagaacaa
      601 ctcattaatc aaattctcta cgaattgagg acgagccccc atatgcacaa gttgcccact
      661 gaaattataa atgccgacat cttttgaacg aaaagcccct gcgtcattta ctaagtcagc
      721 agtaagaaac ttatgtgctt tgagaaaatc tttaatcgag taaggattat agtgcatcat
      781 ttcatcgtaa gcgtcatagg catttttgac ttcacgaata tctttggggt gtccgagaac
      841 ctttttgccc ttaatgattg cggtaacttg ctcaatcgtt aatgaatttg cctcaatagc
      901 taaagaggct tgaattgatc tcaagcggtt attttttcta agatgtaaat tacgctcaaa
      961 atccaattgt agcgttccca atttatgaga aatttctaca accagattca gcattttagt
     1021 ggtaactgta aaaggtggtt tataagccat tttgcaataa tcctaaaaaa ttaaaccgct
     1081 tgtcattgtt actccacctt cggcttatcg ccgttttcaa cacagccttt gccgatggtg
     1141 acttttttcg cattgagggt tgggagatcg tacattgtgt caagtaataa gttctcgaca
     1201 atagaacgta acccacgagc cccggttttg cggctaatcg ctttttgggc aattgaaatt
     1261 aatgcatctt tggtgaagtg caattcaacg ccttccattt cgaataaggc ttgatattgc
     1321 ttgatgatcg catttttcgg ctcggttaag atttgaatca gagcttcttc gtccaattct
     1381 tgcagcggag tcaccaccgg taaacgcccg attaattcag gaattaagcc gaatttgact
     1441 aaatcttccg gttcaacttg tttgaatagc tcggttaaat cttggcgatc tttatctttt
     1501 ttcaatgccg ctgcaaaacc gataccacct tgagtgttgg tacgggcttc cacgatttta
     1561 tctaaaccgg caaaagcacc gccgcaaata aagagaattt tggaggtgtc caccggaatg
     1621 gtttcgcctt tcgggtgttt gcgaccgcct tgtgggttaa tgttcgccac cgtgccttca
     1681 agtagtttta ataaggcttg ttgaacacct tcgcccgata catcacgggt aatggatgca
     1741 ctttccgatt tacgggtgat tttgtcgatt tcatcaataa aaacaatgcc tcgttccgct
     1801 tgttcggctt caaaatcgca tttcattaat aatttttgaa tcacgttttc gacatcttct
     1861 cccacatagc ctgcttgggt aagggtagta gcatcagcta ccgcaaaagg tacgtttaaa
     1921 cggcgggcaa gggtttctgc caacaaggtt ttaccgctac cggtcggccc gattaataaa
     1981 atattacttt tacctaactc tacgccatta gtggcttgat ggtttgacaa tgcacttctt
     2041 aagcgtttgt agtggttata aacggccacc gaaagcactt ttttcgcgtg ttcttgaccg
     2101 atgacataat catctaaatg agcgtgtaat tcgtgaggtg tcggcacatt ggtgaaaaaa
     2161 ctgccttcat cgtcttggtt ttcatcaatt aacggctctt cttcaccgtg taataaggcg
     2221 taggattcct cgatacattc attacaaata tagccttccg tgccttcgac taattgatcg
     2281 acttcggtac gttttttacc gcaaaaacta cagtggggtt ctttttcaaa tgccattacg
     2341 ccacctcact gcgagaagtt aatactttgt cgattaagcc atactcagcg gcttcttccg
     2401 cagacataaa attatcacgc tcggtatcgg ctaacacttt ttcatagctc tgaccgctgt
     2461 gttctgccat acggcgggta agggtagctt tcaagcgtaa aatttcttcc gcttgaattt
     2521 gaatatcggt tgcttgacct ctcgctccac ctaaaggttg gtgaatcata atacgagcgt
     2581 gcggcagagc aaagcgttta ccttttgccc cggctgaaag caaaaatgcc cccattgaag
     2641 ccgcttgccc tgtgcaaagg gttgctacat cgggtttgat gaagttcatt gtatcgtaaa
     2701 ttgccaagcc tgctgttacc acgccacccg gtgagttaat gtataaatag atgtcttttt
     2761 ccggatcttc ggcttctaaa aacagaagtt gtgccacaat caggtttgcc atattgtctt
     2821 ccacctgacc gtttaaaaaa ataatacgtt cttttaataa acgtgaataa atgtcgtaag
     2881 aacgttcgcc ttttgaggtc tgttccacca ccattgggac taatgccatt ttgttttcct
     2941 ctgtcgtaat acaaaatctc gctattctag caaattttca gaaaatcatt aacaacaagc
     3001 ggtcagattg ttaaaatctt ttgcaaatga tgaggaaatt atgacattaa cagaaattta
     3061 ccaaaaattt gaacgttgta aatcgtggga agaaagatac cgcttgttaa ttcagctaag
     3121 tcgcttgtta ccaaaaccaa gtgagcaaga gttggcacaa atagcggaaa ttgagggctg
     3181 tgaaagccgt ttatggtttg aatttcaagc tgagccacga aaagtagtgg catatagcga
     3241 tgcccgttta atgcagggga ttttatttat tgtgagtgta gctttaactg aaaaaacggc
     3301 agaagagctg aaaggctttg acttaaaaac gatgtttgat gagctaaaaa tttcacaaaa
     3361 tttaaccagc acaaggttaa atgggttggg tcagttacag aaacatataa tgatgaattt
     3421 gtaattcacc ctcgcccctt gtgggagagg gtgaataaaa tccgcaggat tttattcggg
     3481 agaggggaat ataaaaaacc tctgatttct cagaggctta aatttgttgg cggaacggac
     3541 gggactcgaa cccgcgaccc cctgcgtgac aggcaggtat tctaaccagc tgaactaccg
     3601 ctccatactg gtgctaaaat aatagtggtt tcctcaacat tgagcaaata gtttttgcaa
     3661 aatagtgttt aattggttgt aaaataacca ctttatttct gcttgatcgc cttgataaac
     3721 agcaacggcg gacggtgctg taaatcttta aattcattgt gccaccgagg ttggcctgcc
     3781 agcattggtt cttccatttg cacaatctca aacccgcctt gaataaggtt attcacaatg
     3841 gttgccattg tgcggtggta ggttttaaag ggttgttgaa accaacttct gtcccgttcg
     3901 ccctcttccc gataatagtt caagcggtaa gcaacttgtt gtttttcttg gtttttctcc
     3961 caacgatagc cttctcggta acaggtgaca atcgggtgtt cttgcgagaa aatcagcgtg
     4021 ccacaagcag tcattttttg cgaaattttt gcaagtagtt cggaaaaatc agcaatataa
     4081 tgaaacgcaa aagagctggt tactacatcg aaatcgccct cgctgatctc atttaatcgc
     4141 tccatcggca ggcagtaaag ggaaaaatcg ttgccttttt gccaatgagc agaaagatcg
     4201 ctttctgcct gttgtagcat taattcagat aaatccaacc ccaccacttt ttctgcaccg
     4261 agcgttaaat aatgggctaa atgaactcct gtgccacaac ctaaatccag cacttttttg
     4321 ccggttaagt ctggcagtag agagaacatt gttggctttt ccaccacttc attcatactt
     4381 attggatttt gtcgaagttg ttggtaacgc tcaaagaaaa tcggagtgtc gtaaatgctt
     4441 tttttcactt aatagccttt aaacaaatat aaaataaggc gggttaaaac ccgccactac
     4501 gatatgatta gtaagtcgat aattttcgca aagtttctaa cgcttttcca ctctcaagcg
     4561 tttcttttac tttttgcaca ttggctttta aatcatcttc tccaaaggtt ttcattaata
     4621 atgcgacatt tgctgccacc gcatcaatat gagccagttt accttttcct tgtaaaatag
     4681 cggttacttt ttcggcattt tctgcaggtt caccgccttt gagatcttct aacgaatggc
     4741 gttcaatgcc gaaatcttcc ggcgttaagg tgtaatagtc gatctgtccg ttttgaattt
     4801 ccgcaacctg cgtttcgccg tgaacggcaa cttcatctaa acctgcaccg tataccacaa
     4861 tagtgtgttc gtaacctaag gcttttacgg tttcagcata gactttcact aactcagggg
     4921 agtacacacc gagtaattgg cgtttagcgt gagccgggtt taccaacggc cctaaaatat
     4981 tgaaaatcgt gcgggttttt aaggcttggc gaacaggggc ggcatatttg aatccgctgt
     5041 ggtaggttgg ggcaaacaaa aagcagatgt tggtttcatc taaagcaagg cgtgccgttt
     5101 caggtgaaac gtcaacatta atacctaaat ggcttaatac atcgcttgag ccggttttac
     5161 ttgatacgct acggttgccg tgtttggcaa ttttatagcc cattgtggcg gcaacaatcg
     5221 cacttgtggt agaaatgttg atggtattat gcccatcgcc acctgtgccg acaatatccg
     5281 caaaagggta atcaggcgtt gagaacggat tggcattttc aagtgcggct tttgcagcac
     5341 ctgcaatttc atcaacggtt tcgccacgca gttttagagc gattaaggca gcagcaagtt
     5401 gttcatttga tacattgcct ttaataactt cactaaaaaa acggtgagat tccgcttggg
     5461 ctaaggcttg gttggcgaat aatttatcta aaagtgcttg catagtctct tcctttttaa
     5521 ttagcgatgt gcctgatatt ccaaatcggt tgcctcgttg ccggtcattc cacgaaagcc
     5581 ccagcaatgc tctggctgtt ctttaatggt gatttcaacg tccattggca caatgccgac
     5641 tttggtgtgt aaggcactaa atagtccttt aattaagcgt tttttgagct gttcgctccg
     5701 cccttgcatc aggtttattt caatcacaat aaaatcttgg ctacggttaa ttgggggata
     5761 gaaattttcc gcatccaata agtcaaaacg caaagcgtgg cgttgttttg gtacgccaag
     5821 gctcatttgc atacagtcaa aaatcacgtc tgcaatcagg gctctgcggt ctgctaaggt
     5881 ttgttttaat ccatatacac taatcatttt tttctcctaa taaccattcc accgactgct
     5941 taagtaattt tgtgccttgc acggttaaaa tggattccgg gtggaactgg aaaccgcaaa
     6001 tcggtaaggt tttgtggcga attgccatca caatatgttc aaatttcgca ttaacgataa
     6061 attctgccgg taattcatcg cccattaatg agtgataacg agcgacaagc attggattgt
     6121 taatgcctga aaacatcgct tggttatcgt gttcaatacg agaaactttg ccgtgcaata
     6181 ctgtgccggt atgcactact ttgccgccaa aggcctcaat tagagcttga tgtcctaaac
     6241 aaatgccaat catcggtact ttgtctttca gacggcgaat aatttccaat aaattgcctg
     6301 cctcagccgg attacccggg ccgggggaaa gggcaaccaa acaattttcg gtggtttcag
     6361 ctttggctaa aaaatcctca agcggataat cattgcggaa aatcgttacc tgatgcccta
     6421 attcacgaaa ttgatcgacc aagttatagg taaaagagtc gaaattatca ataaaaagaa
     6481 tatttgccat agtttgtcct tatgcttttg cattcacctg cccaatcgct tttaacaccg
     6541 cgcgtgcttt atggcgtgtt tcatctgcct ctaattgtgg atcggaatcc agcacctcac
     6601 cacaaccagc ttgcacatag gcaatgccat tttgaacaaa ggcggaacgg atcacgatac
     6661 aggtatctaa attgccgtct gaggttaaat agcccaccgc accgccgtag ctatggcgtt
     6721 tttgttgctc gacttggtag atcagttgca ttgccttaat tttcggagca ccagttagcg
     6781 ttcccatatt catacaagct tgataagcgt gcagagcgtc aagatctttt ctaagtgtgc
     6841 cgatcacacg agaaactaag tgcataattt gcgaatagcg gtcaatttgc attaaatcaa
     6901 ccacacggcg agtgccggat tcgctcacac gagccacatc attgcgggca agatcgacta
     6961 acattaaatg ttcggcaagc tctttttggt ctaaacgcag ttctaattcc aaacgggaat
     7021 ctaattcagg atcgatatta ccttgttcat caaaaccgcg tgggcgagag ccggcaatcg
     7081 ggtaaatttc caactggcgg ttggcttgcg aatatttcaa cgcactttca ggcgacgccc
     7141 caaacagagt gaaattttcg ccctgcatat agaacatata cgggcttgga ttgttgattt
     7201 tgagctgttt atagctggca agagtattcg ggcaaggcaa gctgaaacgg cgagagggca
     7261 caatttggaa cacatcaccg atattaatat ggtgtttgag tttgcggata atcgctttga
     7321 aatcttcatc ttcaatattg gcggttgcct cactcgttgc ggtttggttc gctagaggca
     7381 gctcaatatg tgacagattt gcaagttttt gcgtaaattc gaccgcttgt tggttcaaat
     7441 tggtttgttc attcggttca aaacagaagg tgtttagcac cgcagtttcg gtttggtggt
     7501 cgattgtaac cagttgctct gctaaataga aagtgtaatc tgggcaactt aagccatcat
     7561 cttgcaggct gatattttcc atcggaataa aatttgccac caaatcgtag ctaaataatc
     7621 cgcccaaata gataggcgat gtggaatcag caaacagttg gctcaccgtt cttagcccgt
     7681 caaacacggt ggtggttttg agcttgctgt cttcatctaa ctggttgctg atggttggga
     7741 aaatcgcttg caagcggtcg tttttgtcta aaaatttgca agtcggagca gggtttaaca
     7801 ggctcaatgc gtttgcaatc aaaggtaaaa ccgcttctcc gtttggggtt aaagcgtgga
     7861 aagtcacggt ttgatcttca cagaaaatat gcactgccga tttcgcaaac agcaaacttt
     7921 ttacactgtt tttactttga atttccgctg aatctaataa tagcgtatgt gggcgttcgc
     7981 cgcataatgc gtaataaaca cgggtcgtat cggcaaaata gggtaattct gtttgagtaa
     8041 tcgttaattg aggcatagca aattcctatt caatttttcg tactattaaa ctagtacatt
     8101 aaaaagaagt caagcaatta ttccagataa ttatgcgagc ttgggcgaac ttggtgtata
     8161 attagcccaa tttttagaaa gtcgaaggct tgagactatg acacaatttt tttatatcca
     8221 ccccgacaac ccacagcaac gcttaattaa ccaagcggta gagattattc gaaacggtgg
     8281 cgtaattgtt taccctaccg attcaggcta tgctctcggt tgtgcaatgg gcgataagca
     8341 cgcaatggat agaattgtag caattcgtaa attgccggaa aatcacaatt ttaccttagt
     8401 ttgtagtgat ttatccgagc tttctatcta cgcgttggtc aataatcaag cctatcgctt
     8461 aattaagaat aataccccga atccttatac ttttattctg ccggcaacta aggaacttcc
     8521 tcgcaggctg atgacaaagc gtaaaacagt ggggattcgt gtgccggata atgcgatcgc
     8581 attggcgtta atttccgcct taggtgagcc gattctttct tgctcgttaa tgttgccgga
     8641 gacggaaatg accgagtcag accctgatga aattcgggat catttgcaaa atcgggtgga
     8701 tttaattatc cacggtggtt atttagggca gcagcctaca acggtagttg acttaaccga
     8761 tgacgtgccg gttattattc gagaaggatc gggcgatcca acatcgttta attaaattga
     8821 tgttgtatga ttaatatata gaattatgcg taggggggct gtgccagtcc gtattaatat
     8881 cgttatttgg acaggcacag gacctgtccc tacaatgaaa atcaaattca gacgcttgtg
     8941 aaagcgacaa aaggaacctt atgacaactt ttcaaaaaaa atcaactgcg actttccgtg
     9001 cagacaaacg tggtgaaagc cgtccctcat ttaaaaaaga agagcaaaaa tctgaacgca
     9061 aatttggtaa aacgtcagaa aaaccaccac gtccaacttc taagccatta acgcaaagaa
     9121 ttgcaaaaaa agtggaaaaa acgaccgcta gtgaagtggc atctcaagag aaaaaagcca
     9181 aagtagtagg tgaaaagcta caaaaaatct tagcgcgagc agggcaaggt tctcgccgtg
     9241 aattagaaga gattatcgct gctggacgag tgagcgtgga cggtaaaatg gctactcttg
     9301 gtgatcgtgt gcaggttagc tcatcgacta aaatccgcat tgacggacat ttagttaatt
     9361 taatgccggc acaaaaagag atctgccgtg tattaatgta ttacaaaccg gaaggggaac
     9421 tttgcacccg ttccgatccg gaaggacgat ccaccgtatt tgaccgcttg cctcgtttaa
     9481 gtggcgctcg ttggattgcg gtcgggcggt tagatattaa cacctcaggc ttattattgt
     9541 tcactaccga tggcgaatta gccaaccgtt taatgcaccc aagccgtgaa gtcgaacgtg
     9601 aatattcggt gcgtgtgttc ggcaacattg acgatgcgat gttacaacgc ttacgcaaag
     9661 gcgttcagtt ggaagacgga ccggcaaact ttaaacaaat taaggttgtg ggtggcacag
     9721 gcttgaacca atggtttgat gtgactttaa ccgaagggcg taaccgtgag gttcgccgcc
     9781 tgtgggaatc gcaaggggta gaagtcagcc gtttgattcg tatccgttac ggcaatatca
     9841 aattagataa aggcttacct cgtggcggct gggaagaaat gggcttagaa caagtcaatt
     9901 acttgcgtga gctggtaggg ttaccgccgg agactgaaac taaagtggaa gtgggggtaa
     9961 accgccgccg aaccaatatc cgtcaaattc gtaaagcggt aaaacaacat caaaaatatc
    10021 gtggctaaac accatctttg gggctgcatt agttctgcta atgcagctat tttctttcaa
    10081 aaaaggagca tttatgtctt gggatattgt tgcaacattg gcggtcactg ggattgccgt
    10141 atttttattt gcaactgaaa aaatgcgaat ggacgtagtt gcgattttag tgctgtgttc
    10201 attagtatta ttagggcagg ttgataccaa atctgctctg agtggatttt caaactcagc
    10261 tactgtaacc gtaactgcaa tgtttgtatt agctgctggt ttacaaaata gtggtgcttt
    10321 agatagtgta ggcagtttac ttgctaaggt aaaatctcct tggttattct tgcttgtact
    10381 ctgtggcgta aatgctgctg tttctccttt tgtgaataat acggcagtgg tcgcagtatt
    10441 aattccgatt gtgattgccg cagcacagaa tataaaaatg gctccttcca aagcccttat
    10501 tccgttatca ttttcttctc aaatggcagg tgtttgtaca ctgatcggca cttccactaa
    10561 tctattagtt aatgcaatcg ctcaaaagca agggcattcc ggtttcggta tgtttgaatt
    10621 tgcccctttg gggattattt ttttagtggt tggggttgcc tatttattag tgaccagccg
    10681 tttcttatta cccgaatcac atttgcaact tgaagatggt gaggggtttg gaaaatatgt
    10741 ttctgaactt aaagtaaata aagactctgt attaattggc aaaagtacat ttgaatcagg
    10801 attaaatgaa gaatttaatc tatttactat tggtgttttg cgtgatgggg aaagattatc
    10861 gacaccgagt catcaagtat tgcaaaaaca tgatatttta ttgttgcggg gtgaatcgga
    10921 aaatttagca aaagtacgag aaaaatatgg attgcaccac gttgtgtatg gacgccgtga
    10981 gaatgatgaa gataatctgg atgaagactt gatggtggct gaagtgatga tttctcctat
    11041 ttctcgttgg ataggaggga ctattcctat tttacaacag cgttggaata aaaatgcaac
    11101 ggtgttaggc attcaacgcc aaagtaaagt aattcgtgag cgtttacgca ccactgcttt
    11161 taaaatgggg gatattttat tactcacatt accaaaagag gatatggaga cgttacgcca
    11221 agataaagac tttattgtgt tatcttctga tttagtcaaa acggaggaat cgtggaaaag
    11281 taaatttgct ttaggggtaa tggttttggt ggtggcaaca gcagccttag gctgggttcc
    11341 tatttcagtg agtgccttaa ttggtgcagt tgcgatgtgt gttgctggtt gtttaacggc
    11401 tgaagaagcc tatcaatcta ttgactggaa aatcatttta gtcttagctg gattactgcc
    11461 attaggtgaa gcgatggcaa atagtggggc ggcgcaattt attgttgata acacgcttgg
    11521 taaagtaggg gagttcgggc ctttagtggt gttagctgta ttatatttac tgacaatggt
    11581 gttaaccgaa tttatgagta atgcagggac tgccgtgttg cttacgccta ttgcggtttc
    11641 taccgctaaa atgttagggg tagatgcttc cccattcatt attgccgtaa tgtttgcggc
    11701 tgcgaccagc tttatgaccc ctgttggcta tcaaaccaac acgatggtat acggtgcagg
    11761 tggctataaa ttcacagatt ttattaaaat tggtttaccg ctaaatgtaa tctattggat
    11821 tttagggata gtattaattc cgattttctt cccttttaat ccataattga tagataatta
    11881 tagaaaaaag gtttacagat cagaaactct gtaaaccttt tttattcagc aataaatcaa
    11941 ttttctattg gaaaattacc attgataacc catgccaata ctaccaccaa agtcgcctct
    12001 ggtattgctg ttaccagtta atttatagat aaccttcccg ttatctgaaa tccgagaata
    12061 acctactgcg attgcagctt cattacggta tgtatctcca gccgttgcta acatactttt
    12121 acctggtaga tatgcttgcg gtaaacctgc ggttgcagtt gcaccagcaa taccagcgcg
    12181 taaacgttta tcaactttgt ttacttttga atcaatatta ttgatcttat tattgatatt
    12241 tttttctgtt gcttttaatt ggctaaagtt aactgcatca gtatcttcag ttcctgcttt
    12301 tacgttagtc acttttgttc ctgctgcatt aatacctgtt ttagttatac tcggtccccc
    12361 tacaatagtt aatccattag tatcaatggt tgtatcacca gtcttaacag tatcggctac
    12421 agcaatgtta gctgttactg tttgagctgt gacagaatta actttaatat ctttagctaa
    12481 tttaaccgtt aatgaaccat taccatttga aataaccccg atattattat cagttagttg
    12541 tgattcgtta gataccccac cttttactgt aacagtagaa cctaatttac gttgagatgg
    12601 cgtgccggta tcacctgcaa atgttagtgg gctggttact gcatcattta acgcagtaat
    12661 tgcagagcct acattattga ccgttttact aacttcattt gtaggagcgc catcaaccac
    12721 agtatagctt ggggctgaaa cagcaccatt tgcatttaca cttgaattac cacctaaagc
    12781 ggtagcaata gtatttgccg tatcgtaaag ttggctacca ttaactgcat ctgctgagat
    12841 aggtgaaata tcaccatcag ctacattagt tatttttaat ttgccagcat cgacacctgt
    12901 cattgtgaca cttgggccat tattaatggt taagccgttg ttatttagtt ttgaattacc
    12961 aacagctacg gagccggcag gagttaaatc aatgtctttc gctaatttaa ctgttaatgt
    13021 gttagcatct gttgccacta caccgatatt attatcagtc aatatggttg catcggcccc
    13081 acctttaaca ttcagagaag tacctaattt acgaacaatt tcagtaccag catcatctac
    13141 aaaagtaagt gctccattac ttaactcatt cactttcgtg tttaaaccat caatttcggt
    13201 ataagcagca taaagttgtg aaccgttgat agcatccgtt gatgagtcca aaatacgacc
    13261 tgctgcaaca ttcgttaaag tacgttcatt gcctacagaa ccaatactta cagttgagct
    13321 tggcgtagta cctgcaaatg tgtatgtatt gccatttagc gttgcacttt ttgttgcaac
    13381 tgtggctact gtttcagagt tagtacctaa tgcaacagaa ccttggtgtg ttgcttttgc
    13441 attttggcca agagccactg cagcagttgt tgttgcttgt gatgaaacac ctaatgcaat
    13501 agaagctaca ccggctgcat ttgcactatt acctaaagca atcgcagagc tacctgcagc
    13561 attggcattt ctacccacag aagttgacca tattccacct gcattagcag agttacctaa
    13621 agcggttgac tgtgtacccg aagcatttgc gttatagcct gcagcaagag aatctgcacc
    13681 gattgaactt gcttcataac ctacagcggt tgaattttca ccggtagctt cagatttaga
    13741 gcctaatgca gttgcacggg tagctgtcgc tgttgaagct gtaccaatag ctgttgaggt
    13801 atcagcattt gcattggctg cagaaccaac cgcgagggca tttgttgcat ttgcattcgc
    13861 attgtagcct atagaagtgg cattcatacc atcagctgtt gcgcgaggac caactgcagt
    13921 tgtacgttca ccgtttgctt ctgcttcaga gcctaatgcg gttgccagct caccattagc
    13981 acttgttgca acgccgatag ccattggatt aacaccgcta gagcctgaat tatcatagtt
    14041 agcacgttga atgccatcat ctgaaatact aacataatga gttgcaaatt tgctgatagc
    14101 ttgtttgagt tgactgacat tgaccgcatc agtatctaca tcgcctgcgg caacattggc
    14161 gattttatta ccgccattat ctaagccaga tttagtaaga cttaccggtt tgtctgcaac
    14221 gccgttagcg atggtgatac ctgtattgtt aacaacggta tcacctgttg ttaatgaacc
    14281 attagcgcct aagttaactt tttctgctaa ttttatggtt aaagtactat tgccatcagc
    14341 tacaacacca atattattct cggttaatat gcctgtagat ccgcctttga tcttgactgt
    14401 tgaacctaga tggcgctcaa aattagttcc tgtatcaccg gcaaaggtta acggactgat
    14461 caccgctgtg tttaatgcgc ttagtgctgc agaaacagta gtgtatctcc cttgtttgcc
    14521 ttctttatct gcatctggtg tgccattcac taaagcgtag gttgggaaag tgatatttcc
    14581 attttcagta acagctgccc caccacctaa gatatttgcg gttgttgcag caacattacc
    14641 tatagcttgt tgtgttaaat ataattgtga accgtttatg gtatctgtag agcttaaaga
    14701 tatacgtcct gcagcaacat tggtgatagt tctctctttg ccttccgccc caatacttac
    14761 tgtagcaatt ggatttgttc cagcaaagtc actatatgta ataccattta cagttgcatt
    14821 tgtagttggt atggctatag ctgtaactga gttgctacct agcgctatcg aatcggtatg
    14881 ttcagcagtg gcatttcgac ctatagcggt tgcattaaag gcggaagcat ttgatgattc
    14941 tccgattgca attgtgcgtt gatttgttgc tttagcgctt acccctagtg caacagaagc
    15001 cgcgcctgat gcagtagcac gattgcctaa agcggttgca gaacctccac ttgcattggc
    15061 ttcacgacca aatgcagaag cataatcgct ggttgcaccc gcattagtac caacagcagt
    15121 agttaaattt gctgttgcat ttgcataata acctaatgag gttgcaccgt ggcctgaagt
    15181 cttcgcttca taaccaattg ctgttgagtt atcgccattt gcttgagatt ttgcaccaat
    15241 tgctgtggag tgaatagctg ttgcgttagc ttcagcacca taggcggagc taacaatacc
    15301 agttgcattg gcatgactac ctacagcagt tgcttttcct attaccgttt ctcctgttgc
    15361 tgctgtagtt ttgtaattat taacaccatt tgcaagagcg gaattaccga tggcgatatt
    15421 atcatcactg gttacatttg tagtaggtcc tgctagtttt gcattagcat aagtaccaat
    15481 tgcaatattg tggctaccac tagtaccgtc tccagcagta ttaccaatag aaatcgtatt
    15541 gtttcctgtt acattagagc tagccgaata accaatacca atattgtatt ctgtgctgtt
    15601 agagtgattt aatccggcat gatcgccaat aaaaacttca cgtaagccca ttgcggttgc
    15661 attgtaccct actgctacgg aacgtttatc ggcagtggct tgcccaccaa cagctgttga
    15721 agcaaaacta gcgttagcaa agcctcctaa tgcagttgaa aaatcggctg tcgcggttgt
    15781 gttataccct aatgctgtag aaactttacc gctatttcct tctaagcctg ttattgtgct
    15841 tactagtgtt gagttaactt tagatccatc accaattgcg atagatgttt gtgggttatt
    15901 atctggtatg gtcccatagg ttggtgaata ggttgcagca cttgcaaaac ctgcagaaag
    15961 cgcaagactt agtgtgctga gtttaataat attagtggtt agtgatgtat ttgttgcatt
    16021 agatttatta gcacttcttg ataattcaga agcaacaatc caagttcgtt ttgcatggtt
    16081 ccaaacaatg cgataaattt tattcataga actactcctg ttcttatttt ttaataattt
    16141 taatgatttg agtattgcct agccaaatat atacaatagg ctgaaaaatt atataggtga
    16201 ggttttatgg tgtaaatagt ggctttttag
//
LOCUS       DANLXO010000064        15788 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.064, whole genome shotgun sequence.
ACCESSION   DANLXO010000064 DANLXO010000000
VERSION     DANLXO010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15788
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.064"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(60..2162)
                     /gene="fusA"
                     /locus_tag="PXD69_001677"
     CDS             complement(60..2162)
                     /gene="fusA"
                     /locus_tag="PXD69_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDL6283861.1"
                     /translation="MARTTPISLYRNIGISAHIDAGKTTTTERILFYTGVSHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMSQQYPQHRINVIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRTGANFLRVVEQIKT
                     RLGGNSVALQLPIGAEDSFKGVVDLIKMKAINWNEADQGMTFTYEDIPADMLEACEEH
                     RAMLVEAAAEASEELMEKFFSGEELTEDEIKAALRQRVLAGEVIPVCCGSAFKNKGVQ
                     AMLDAVIDYLPAPTDIPAIKGINEDETEGERHASDDEPFASLAFKIATDPFVGNLTFF
                     RVYSGVINSGDTVYNSVKQKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTG
                     DTLCAIDAPIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEE
                     SGETIISGMGELHLDIIVDRMKREFKVEANIGKPQVSYRETIRTRVNDVEGKHAKQSG
                     GRGQYGHVVIDLYPLDAEGPGYEFVNEIKGGVIPGEYIPAVDKGIQEQLKSGPLAGYP
                     VVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFAKASPVLLEPIMKVEVETPPDYV
                     GDVIGDLSRRRAMVNGQEANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLK
                     YAEAPKNVADAIIEARRK"
     gene            complement(2264..2734)
                     /gene="rpsG"
                     /locus_tag="PXD69_001678"
     CDS             complement(2264..2734)
                     /gene="rpsG"
                     /locus_tag="PXD69_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDL6283862.1"
                     /translation="MPRRRSIEPRKILPDPKFGSELLAKFINVLMVDGKKSTAEKIVY
                     GALETLTQRSGKEALEAFEIALENVRPTVEVKSRRVGGSTYQVPVEVRPTRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAADNKGSAVKKREDVHRMAEANKAFAHFRW"
     gene            complement(2865..3239)
                     /gene="rpsL"
                     /locus_tag="PXD69_001679"
     CDS             complement(2865..3239)
                     /gene="rpsL"
                     /locus_tag="PXD69_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDL6283863.1"
                     /translation="MATINQLVRKPRVKKVVKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRIRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGAL
                     DCAGVKDRKQGRSKYGVKRPKA"
     gene            complement(3360..4319)
                     /gene="rfaC"
                     /locus_tag="PXD69_001680"
     CDS             complement(3360..4319)
                     /gene="rfaC"
                     /locus_tag="PXD69_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HDL6283864.1"
                     /translation="MKILIVKTSSMGDVLHTLPAITDMQNAIPDLKVDWVVEENFTEI
                     PAWHSAVNKVIPVAIRRWRKNLCQRQTWVECQQFLKQLKSEQYDAVIDAQGLIKSAVL
                     VTRQAKGKKFGYDKNSAREGLSSLFYDETFNIPYQQHAVERIRKLCAKSLGYALPTER
                     GDYCIAQHFAKNPQKTTAYIMLIHATTRADKHWQEAYWAELIQALDKHNLAVRLPWGN
                     QAEKERAERLASVANNAKVLPKMSLTDIATQLAGAAAVVSVDTGLSHLAAALDKPNVI
                     LYGATDPKLIGAYGQNQFYLKADKMENITSSQVLEKLLPLINK"
     gene            complement(4386..5423)
                     /gene="waaF"
                     /locus_tag="PXD69_001681"
     CDS             complement(4386..5423)
                     /gene="waaF"
                     /locus_tag="PXD69_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDL6283865.1"
                     /translation="MNILVIGPSWVGDMMMSHALYQQLKIQYPNCQIDVMAPDWCCPL
                     LARMPEVRNAISMPIGHGSFRLCERYRLGKSLRNQYDMAIVLPNSLKSAFIPLFAKIA
                     RRRGWKGESRYFFLNDLRSNKNDYPMMVQRYVALAFEKATVPTAQQLPIAYPYLTTDS
                     EQIEQTKAKFEKQLAYAENRPAIGFCPGAEFGPAKRWPHYHYAILAKMLIEQGYSVRL
                     FGSKKDEAAGEQIRLALPENLQRYCLNLAGQTDLNQAVDLIADCNAVVSNDSGLMHIA
                     AALNKPLVALYGPTSPQYTPPLSQNAEIMRLIEGGLIKIRKGEGAEGYHQSLIDIQPE
                     MVMDKLAELLV"
     gene            complement(5534..5896)
                     /locus_tag="PXD69_001682"
     CDS             complement(5534..5896)
                     /locus_tag="PXD69_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HDL6283866.1"
                     /translation="MLVACSTVVTPVEQIHQVQKEKESVKKVTKLIAQAPKVSLYRCE
                     NDKKVEVERQGRTKKALKKEIVTVSYQGTTHQLSPSVTRDGKKYTNIRWTWHETRSGK
                     AFLYNNTKKTLAANCIKQ"
     gene            complement(6014..7333)
                     /locus_tag="PXD69_001683"
     CDS             complement(6014..7333)
                     /locus_tag="PXD69_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="opacity-associated protein A"
                     /protein_id="HDL6283867.1"
                     /translation="MTQNNFRKEPVFGESSVTSQDAEATKTDTAQAPYVSLRSTKAPG
                     HTFTPIMKRPDAKVEDHTADVFSAKQAKEFQFTPSSEATEAVEPDNTIHSVEESVSTA
                     SFNAVEAQENVEKEVVKPAPESFTTERIIPNAATAAAAATAAAAATKTKEIKAKMPPK
                     TRRLLLVALLALALLVLFFLLKPSTPETVEELQSQQGGSLPIEFRPVDEAEAKRAEEQ
                     ARAEQEAAEAAKAQEQAQAAQQESVTVAPAQTEQTMAKPSQDSQSQTQSQAVVEQPVA
                     VKPVENKPVVAQPAIKPKTENSVVFQPETTVKQQPKAPAKTEVKTERATLAAKETAKT
                     AAKPVEKAPTKTEAVKAAPAAESANAVATKTMTVPKGVSLMQVFRDNNLNISDVNAMS
                     KVNNVVSNLKVGERVTVRLDKNNRVVEMSIGSGGKFTRQANGSYTFK"
     gene            7626..7964
                     /locus_tag="PXD69_001684"
     CDS             7626..7964
                     /locus_tag="PXD69_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDL6283868.1"
                     /translation="MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQI
                     TNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRTKNGNFKNIEQLAEVSGIGQATV
                     EKNRANIILE"
     gene            8129..9022
                     /gene="psd"
                     /locus_tag="PXD69_001685"
     CDS             8129..9022
                     /gene="psd"
                     /locus_tag="PXD69_001685"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251643.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL6283869.1"
                     /translation="MQLKKYPVPTYFQRVKIALHYLLPQLAITRAAGWLAEQKWGVVT
                     HLIIKLFAKQYKVNLSEAKKTEPSDYATFNEFFIRELKENARPINQDPNTLCLPAEGK
                     VSESGEISDNRLLQAKGHHFTLETLLANDEEMAAKFKDGTFITTYLSPTDYHRVHMPC
                     DGTLRKMIYVPGELFSVNPFLAEHVPNLFARNERVICEFDTAFGPMLQILVGATVTAS
                     MSTVWAGVINPPRADEVVVWNYETEGEKAIKLQKGEEMGAFRLGSTVINLFPKGKVHL
                     NPALIAGMQTRMGEELGRIIN"
     gene            9094..11445
                     /locus_tag="PXD69_001686"
     CDS             9094..11445
                     /locus_tag="PXD69_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL6283870.1"
                     /translation="MYTLQELKQMNEQEIRSRLISPAIRNAGWSDRQIGEEYTFKTNK
                     RFTDGQVVVDPKTTQTKRIEAKRVDYLLYTSANQKIAVVEAKDNHHSSRHGLQQAMTY
                     ARLLDVPFAYSSNGDEFVEHDFITGVQRTLPMSAFPTPDELHQRWAKQYTTEELKIIQ
                     QPYYTSSTDTFKEPRYYQEIAINRTVEAVAKGQQRILLVMATGTGKTYTAFQIIHRLK
                     TSGAKKKILFLADRNVLVDQPMMQDFKPFKDKMVKVSNKKLDSAYEVYLALYQQLDGE
                     TDNELFKQFQPSFFDLIVIDECHRGSAKEDSDWRAILKYFKDATHIGMTATPKETDDA
                     SNITYFGEPIYTYSLKQGIEDGFLAPYRVIRVDLDCDLKGWRPTKGLKDHQGNEIEDR
                     LYTVKDFDYNIVLNDRTRLVAERICEFLRKTDRLQKTIVFCANINHAERMVAELSRLN
                     ADMLKHNSKYVCQITGDQSGKGVDLEEFCDVANEGKDYPVIAVTSKLMTTGVDSKTCK
                     LVVLDANIQSMTEFKQIIGRGTRLRPDFGKEFFTILDFRGVTRLFADPAFDGEPVVIL
                     DVPENKPLVEQPLPKPSDKDIIKDPELKPYKIPVVVDFGTLKLRILDEKVQYLNEQGE
                     LVSEDIDLFSKREMQKEFGSYEQFQQQWTTSGEIFSKFYTDPKWLAALRQTRQFSHDV
                     EDFDVLSHISFGKKPLTKTERAEKVKQSGYVEQYSPENQQVLGLLLNEYVKSGNQDLT
                     KTEILKTPQFSRFGGLVSIIKNFGGKELYQKAVKGLEKMIYSE"
     gene            11493..12962
                     /locus_tag="PXD69_001687"
     CDS             11493..12962
                     /locus_tag="PXD69_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL6283871.1"
                     /translation="MSLNNIVKRLQDVMRNDAGINGDAQRIEQIVWILFLKIYDAKEQ
                     EWELENDEYHSILPNFLRWQNWAEDKKDGKAMTGDELLSFVNNELFPTLKNLPISADT
                     PMNQRIIRAAFEDNNNYMKNGVLLRQVINIIDEIDFAHYQERHAFGDIYENILKSLQS
                     AGNAGEFYTPRAVTDFMVQAIKPKLGERIADFACGTGGFLTSALKVLESQIQTLSDRT
                     LFNNSVYGIEKKALPHLLCITNLLLHDIDNPNVHHDNALEKSVKDYTENDKFDVILMN
                     PPYGGSEIEQIKKNFPTALQSSETADLFMSVIMYRLKQNGRAAVVLPDGFLFGTDNAK
                     VAIKKKLLEEFNLHTIIRLPHSVFAPYTSITTNILFFDKTEPTRETWVYRLDMPQGYK
                     NFSKTKPMKLEHFNEVVEWWGNRQVIEVEGFDKAKSFTLKEMSDRQYNLDLCGFPHEE
                     EEILPPDELIADYQRKRTAYNADIDKILAEITDILGIKL"
     gene            12975..14636
                     /locus_tag="PXD69_001688"
     CDS             12975..14636
                     /locus_tag="PXD69_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL6283872.1"
                     /translation="MLTWEHIEKMIAHQQFIREKAEIEYKEAKNSVPKDLWHTYSAFA
                     NSNGGFILLGIKENEQGHFPELLISGVNDPDKVIDELFSQSRSEKVSKSLLKDNDVKI
                     FQVENKSVIAIYVKAADILDRPIHLNGDYRLSYVRLNSGDHKLTSSELRSFISSYSQK
                     DADGRIVPYASIDDISLSTLDKYRNLLKAHNSTSKLLTLSDEKLLQEIGAYKKDLAQN
                     SEGITNAGLLMFGKHYAITSIFPHFFFEYYEEAGDVKRYTLRITDFDLEEGNLFEFYL
                     KIVPLIQELGKDKHFKLDNLTRTEENEITDGLREALINAITHADYFNNVRHLKVIKTK
                     DNKLIFENAGVMLVDIPTAIAGQRSECRNSIIHNLFHRLGLCERQGQGVRDIYSYWQS
                     RNFNSPLLESEIDYTKLTLTFQSGMIADFEEKFTACFGENFSELQPIQKDCLLFIAFN
                     QGKAMFAELAQKLPQYPRRNITLALARLKEKGLLTSSGSPRKQLYTLVNLEWIITEKS
                     QDDYFNPPFDQLDKASESKGAPPKKSKVKQVKQLPQNKANKLPPK"
     gene            14842..>15788
                     /locus_tag="PXD69_001689"
     CDS             14842..>15788
                     /locus_tag="PXD69_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6283873.1"
                     /translation="MKAQQLKNAILQLAIQGKLVPQDPNDEPASELLCKIQAEKDRLI
                     AEGKIKKNKKTADKAPYTIEPPFEIPESWVWVRLGDICLKITDGTHHSPPNIDKSDFL
                     YITAKNIKKDGLDLSKISYVTKEIHNEIFSRCNPEKGDILYIKDGATTGVSIINTLNE
                     PFSMLSSVALIKTSQEIDNEYLNYVMNSHYFYNISIGSMSGTGIPRITLTKLESYLVP
                     VPPLLEQQRIVQKIEELLPLVERYEQTEQQLTKLNNTFPEQLKKSVLHAAIQGKLTEQ
                     DPNDELASCLIERIKAEKNRLIAEKKLKKPKSVSEIVMR"
BASE COUNT         4772 a         3291 c         3066 g         4659 t
ORIGIN      
        1 tttaatatct tcctaaaaaa tgagccatag ccctattgct atggctcagg ttaaacaaat
       61 tattttctac gagcttcaat aattgcatca gcaacgtttt tcggtgcttc agcatatttt
      121 aaaggttcca tagagtatga tgcacgacct tgagtttgtg aacgtaagtc tgttgcataa
      181 ccaaacattt ctgaaagtgg aacttcagca ttgatcttaa caacgaactc gttcgcttct
      241 tgaccgttaa ccattgcacg acgacggctt aagtcaccga ttacatcacc cacgtaatcc
      301 ggtggagttt caacttccac tttcatgatt ggctcaagta ataccgggct tgcttttgcg
      361 aacgccgctt taaatgctaa tgatgcagca agtttaaacg caagttcaga tgagtcaaca
      421 tcgtggtatg aaccgaagtg taaacgcaca cctaaatcta ctaccgggta acctgctaac
      481 ggaccagatt taagctgttc ttggatacct ttatcaaccg caggaatgta ttcaccaggg
      541 attacaccac ctttgatctc gtttacaaac tcataacccg gaccttcagc atctaatggg
      601 tataagtcga tcacaacgtg accatattga ccacgaccac cagattgttt tgcgtgttta
      661 ccttcaacat cattaacacg agtacggata gtttcacggt aagatacttg tggtttaccg
      721 atatttgctt ccactttaaa ctcacgtttc atacggtcaa cgatgatgtc taagtgtaac
      781 tcacccatac ctgaaatgat cgtttcacca gattcttcat ctgtgtgaac acggaatgaa
      841 gggtcttctt gtgctaaacg acctaaagct aagcccattt tctcttggtc agctttggtt
      901 tttggttcaa ccgcaacaga gattaccggc tcagggaatt ccatacgctc aagaatgatt
      961 ggtgcatcga ttgcacataa tgtgtcacct gtaccaacat cttttaaacc gattgctgca
     1021 gcgatatcgc ccgcacgaac ttctttgatc tcttcacgtt tgtttgcgtg catctgtacg
     1081 atacgaccaa aacgttcacg tttttgtttt actgagttgt aaactgtatc accagagtta
     1141 attacaccag agtaaacacg gaagaaggtt aagttaccta cgaatgggtc tgttgcaatt
     1201 ttgaatgcta atgaagcaaa tggctcatcg tcgcttgcgt gacgctcacc ttcagtttca
     1261 tcttcattga tacctttaat tgcaggaata tcagttggtg ccggtaagta atcgattacc
     1321 gcatcaagca ttgcttgtac acctttgttt ttaaatgcag aaccacagca aacagggatt
     1381 acttcacctg ctaatacacg ttgacgtaat gctgctttga tttcatcttc agttaattct
     1441 tcaccagaga agaatttttc cattaattct tcagaagctt cagctgctgc ttcaacaagc
     1501 attgcacggt gttcttcaca agcttcaagc atatctgccg gaatatcttc ataagtgaag
     1561 gtcatacctt gatcagcttc gttccagttg attgctttca ttttgattaa atcaacaaca
     1621 cctttgaagc tgtcttctgc accgattgga agttgtaatg caactgagtt accacctaaa
     1681 cgcgttttga tttgctcaac aacacgtaag aagtttgcac ctgtacggtc cattttgttt
     1741 acgaacgcga tacgtggcac tttatatttg ttagcttgac gccatacagt ttcagattgt
     1801 ggttgaacac caccaactgc acaataaacc atcaccgcac catcaagtac acgcattgaa
     1861 cgttctactt cgatagtaaa gtcaacgtgt cccggagtat caataacgtt gatacggtgt
     1921 tgtggatatt gttgtgacat accagaccag aatgctgttg ttgcagcaga tgtgatcgtg
     1981 ataccacgct cttgttcttg ttccatccag tccattgttg cagcaccatc gtgaacttca
     2041 ccgattttgt gacttacacc tgtatagaac aagatacgct ctgtagtagt tgttttaccc
     2101 gcatcgatgt gcgcactgat accgatgtta cggtaaagtg aaataggggt tgtacgagcc
     2161 atttttattt attaccttgt ttggggttta aattaaaatt cttaataagg gtaaggcttc
     2221 accgcaaact gagatgaagc ctttgataag tttgcttaaa cgattaccaa cggaagtgag
     2281 caaacgcttt gttagcttca gccatacggt gaacgtcttc acgtttcttc actgctgaac
     2341 ctttgttgtc tgctgcatct gataattcgt tagctaaacg taatgccatt gatttgtcac
     2401 cacgtttacg agcggcttct acgatccaac gcattgctaa agcattacga cgggttgggc
     2461 gaacttctac aggaacttgg taagtagaac cacccacacg gcgagattta acctcaacag
     2521 ttggacgtac gttttctaat gcgatttcga aagcttctaa cgcttcttta ccagaacgtt
     2581 gtgttaaagt ttctaatgca ccgtaaacga ttttttctgc agtagatttt ttaccatcta
     2641 ccattaacac gttaataaat tttgcaagta attctgaacc gaacttcgga tctggaagaa
     2701 ttttgcgtgg ttcaatacta cgacgacgtg gcattggaaa tttctccgta tattaaatct
     2761 tcaggatatc caaaactcat ctaatctgcc ttaaggcatc ttgactggag tttatggttt
     2821 aaatattaaa atttagacgt ttggccttac tcaacggaga accattaagc tttaggacgt
     2881 ttaacgccgt atttagaacg accttgttta cgatctttaa cgcctgcaca gtcaagtgca
     2941 ccacgtacag tatggtaacg aacacccggt aagtctttaa cacgaccacc acggattaat
     3001 acaacactgt gttcttgaag gttgtgacct tcaccaccga tgtatgaagt tacttcaaag
     3061 ccatttgtta aacgaatacg acatacttta cgtaatgctg agttcggttt tttaggtgta
     3121 gtagtgtata cacgagtaca cacgccacgt ttctgcgggc aagcctctaa tgcaggaacg
     3181 ttacttttta caaccttttt cacacgcggt ttgcgtacta gctggttgat agttgccatt
     3241 aaaaaagctc cagttaaaat tattaaaaat aaaattaaaa acatcctttc acacgaaagg
     3301 acggtgaatt ctaaattgaa cgtggataaa agtcaagcac agtaagagaa caacaatgat
     3361 catttgttaa tcaatggaag taatttttct agcacttgtg aagaggtaat attttccatt
     3421 ttatctgctt ttagataaaa ctgattttgc ccgtaagccc cgataagttt tggatcggtt
     3481 gccccatata aaatcacatt tggcttatct aacgcagccg ccaaatggct caagccggta
     3541 tccaccgaca ccactgccgc tgctcccgca agttgagtag caatatcggt taagctcatt
     3601 tttggcaata ccttagcatt attcgccaca ctcgctaaac gctccgcccg ttctttttcg
     3661 gcttggtttc cccaaggcaa tctgactgcc agattgtgct tatccaacgc ttgaatcaac
     3721 tccgcccaat aggcttcttg ccaatgttta tccgctcggg tagtggcgtg aatcagcata
     3781 atgtaagcgg tcgttttttg aggatttttt gcaaaatgtt gtgcaatgca ataatcgccc
     3841 cgttcggttg gcaaagcata acctaatgat tttgcacata attttctgat gcgttctaca
     3901 gcgtgttgtt ggtaggggat attaaacgtt tcatcgtaaa acagactact taacccttct
     3961 cgggcagagt ttttatcata gccaaatttt ttgcctttgg cttggcgagt tactaacacc
     4021 gcacttttaa tcagcccttg agcatcaatt accgcatcat actgctcact ttttagctgt
     4081 tttaaaaact gctggcattc tacccaagtc tgtctttggc aaaggttttt ccgccagcgg
     4141 cgaatagcca ccggaattac tttatttacc gctgaatgcc acgcaggaat ttcggtaaaa
     4201 ttctcctcca ccacccaatc tacttttaaa tcgggaatag cattttgcat atcggttatg
     4261 gctggaagcg tatgtaatac atctcccatt gatgaggttt taacgattaa aattttcatc
     4321 ttttataaac aaacaagcgg tctttttttg caaaaaattg gcaaattcaa ccgcttgtta
     4381 tccatttaaa ctaacagttc agctaatttg tccatcacca tttcaggctg aatatcaatt
     4441 aaactttggt gatagccctc tgccccttcg cctttgcgga ttttaatcaa accgccttca
     4501 attaagcgca tgatctcggc attttgggat aacggcggcg tatattgtgg gctggtcggt
     4561 ccatataagg cgaccagcgg tttatttagt gctgcggcaa tgtgcattaa gccggagtca
     4621 ttgctcacga ctgcattaca atctgcaatc aaatctaccg cttggtttaa atcggtttgc
     4681 ccggctaaat tcaggcaata gcgttgtaaa ttttcaggta atgccaagcg aatttgctca
     4741 ccggcggctt catctttttt cgagccaaat aaccgtaccg aatagccttg ctcaatcaac
     4801 atttttgcca atattgcata atgataatgc ggccaacgtt ttgccggtcc aaattcagcc
     4861 cctggacaaa agccgatggc aggacggttt tccgcataag ccaactgttt ttcaaatttc
     4921 gctttggtct gctcaatttg ttcgctatca gttgtgaggt atggataagc aatcggcaac
     4981 tgttgtgcgg ttggaacagt agccttttca aacgccaagg ctacatagcg ttgcaccatc
     5041 attgggtagt cgtttttatt actgcgaaga tcatttaaga aaaaatatct actttcccct
     5101 ttccaaccac gacgtctcgc aattttcgca aacagtggaa taaaggcaga ctttaatgaa
     5161 ttaggcaata caatcgccat atcatattga tttctcaggg attttccgag tcggtagcgt
     5221 tcacacaaac gaaatgaacc gtgtccaatc ggcattgaaa tcgcattacg cacctcaggc
     5281 atacgggcta aaagcggaca acaccaatcg ggtgccatta catcaatttg gcaattcgga
     5341 tactgtattt taagctgttg ataaagtgcg tgcgacatca tcatatcacc cacccaagac
     5401 ggtcctataa ctaaaatatt catttgcaaa attctcttaa aaatttattc acaatccttg
     5461 taaggattgt tcacagcttc gctgccgttg gcaaagccaa cgttcaaaaa gcgatacttt
     5521 ttgtgtccgc ttgttactgc tttatgcaat ttgccgctaa cgttttttta gtgttgttat
     5581 acaaaaatgc tttaccacta cgggtttcat gccaagtcca acggatatta gtgtattttt
     5641 taccatctct cgttacagaa ggtgaaagct gatgcgttgt cccttgataa ctcactgtga
     5701 ctatttcctt ttttaacgct ttttttgttc gtccctggcg ttcaacttca accttcttat
     5761 cattctcaca acgatataaa ctcactttag gtgcttgtgc tatcagttta gtcactttct
     5821 ttactgactc tttttccttt tgtacttgat gaatttgctc aacaggggta accactgtac
     5881 tacaagcaac taacatcgct gagcttagcg ttaagtagat aagtttgtaa gaggggcaaa
     5941 ataaattcat cctttatctc ctttttaaat aaaagagcaa cgtttgtagc gttgctcttt
     6001 ttcttcattt tatttattta aaagtatagc taccgtttgc ttgacgggta aatttgccgc
     6061 ctgagccaat gctcatttca accacacggt tatttttatc taaacgaacg gttactcgct
     6121 cgcctacttt taaattactc accacgttat tgactttgct catcgcatta acgtctgaga
     6181 tatttaaatt gttatcacgg aacacttgca ttagtgatac accttttggc acagtcattg
     6241 ttttggttgc taccgcattt gccgactcgg cagccggtgc tgcttttacc gcttcagttt
     6301 ttgtcggagc tttctcaact ggtttagctg ctgtttttgc cgtttctttt gctgccagtg
     6361 tagcacgttc ggttttcact tcagttttag caggggcttt aggctgttgt tttaccgttg
     6421 tttcaggttg gaacaccacg ctattttccg ttttaggctt aatcgccggt tgtgcaacaa
     6481 ccggtttatt ttccaccggt ttcaccgcaa caggttgctc aactactgct tgtgattgtg
     6541 tttgcgactg gctatcttgt gacggtttag ccattgtttg ctcggtttgg gctggagcaa
     6601 ctgttacaga ctcttgttga gcggcttgag cttgttcttg agcttttgca gcttcagcgg
     6661 cttcttgttc tgcacgagct tgttcttccg cacgtttcgc ttcagcttca tcaaccggtc
     6721 ggaattcaat cggcaagcta ccaccttgct gagattgtag ctcttcgaca gtttccggcg
     6781 tacttggttt taacaagaaa aacagtacca ataatgctaa cgccaacaat gccactaata
     6841 ataaacggcg ggttttaggt ggcattttag ctttaatctc tttggtttta gtggctgcag
     6901 ctgccgcagt ggctgctgcg gcagctgttg ccgcatttgg aataatacgc tcagtagtga
     6961 aactctcggg tgcaggttta accacttctt tttccacatt ttcttgtgct tcaaccgcgt
     7021 taaaagatgc ggttgataca ctttcttcaa ccgaatgaat ggtattatcc ggctctactg
     7081 cttctgtagc ttctgaactt ggagtaaatt ggaattcttt tgcctgctta gccgaaaaga
     7141 catcagccgt atgatcttct actttagcat caggtctttt cataattggg gtaaacgtat
     7201 gccccggtgc tttggttgaa cgcaacgaaa cataaggggc ttgagctgta tctgttttgg
     7261 ttgcttcagc gtcttgagag gtaaccgaag attcaccaaa aaccggttct ttgcgaaaat
     7321 tattttgtgt catattaatt ccaaataata gcgttgttaa tgagtataaa aatggcgata
     7381 ttctaaagca attcagccgc tatttgaatt tatttaacta aatttacgca actagcggtc
     7441 atttttgcct aattttttgc aaatctattt actttcattg aatttcagac caaatgcacg
     7501 tctagaagtt tagccatttt ctattttttc gatctgtgtc gaaaaattta tttttgccgg
     7561 ttgagttcta ttttattccc tcttaatctt cctttcgacc tttcaacaac taataaggaa
     7621 atcctatgaa gaaaatcaaa caacttggtc taacattctt gtttggctta aatgcaatgg
     7681 cttttgccca aacaccgcca actacaatgc ctgttgaaca aaatgcagtc actcaacccg
     7741 tacagcaaac acaaatcacc aacgctaatg cggtaaatat caatactgct agtgctgctg
     7801 aattgcaaga caagctagtg ggaattgggc agaaaaaagc tcaagcgatt gtcgattacc
     7861 gtactaaaaa cggcaatttt aaaaacattg agcaacttgc tgaagtctcc ggaattgggc
     7921 aagcaacggt agaaaaaaat cgagccaata ttattttaga ataagacaac caaattgttg
     7981 aagtggaatt cctacaaagc ccctatctgt ttttttcttt gtagccactt caacacctta
     8041 aagatttttt atctattttg cattgtattt gctatacttc gcccccaatt aaacgcaaat
     8101 tctcgttttt aaataaaagg aaaacgcaat gcaattaaaa aaatatccag ttccaaccta
     8161 tttccaacgt gtgaaaatcg ctctgcacta tttactgcca caactggcaa ttacccgtgc
     8221 ggcaggttgg ttagcagagc aaaaatgggg cgtagttact caccttatca tcaaactgtt
     8281 tgcaaaacag tataaagtca atttatctga agctaaaaaa accgagccgt cagattatgc
     8341 tacttttaat gaatttttta tccgtgaatt aaaagaaaac gcacgcccga ttaatcaaga
     8401 tccaaataca ctttgcttac cggcagaagg taaagtcagc gaatcaggcg aaatttcgga
     8461 taaccgttta ttacaagcaa aagggcatca ttttacgcta gaaaccttat tggcaaatga
     8521 tgaagaaatg gcggcaaaat ttaaagacgg cacatttatt accacctact tatcgccaac
     8581 tgattaccat cgtgtacata tgccgtgcga tggaacattg cgtaaaatga tttatgtgcc
     8641 gggcgaattg ttctccgtca atccgttttt agccgaacac gttccaaact tattcgctcg
     8701 caatgagcgt gtgatttgtg aatttgacac cgcattcgga ccaatgctac agattttggt
     8761 cggtgcaacg gttaccgcaa gtatgagtac ggtttgggct ggcgtaatta atccgcctcg
     8821 cgctgatgaa gtggtagttt ggaattacga aaccgaaggc gaaaaagcca tcaaactcca
     8881 aaaaggcgaa gaaatgggag ctttccgttt aggctcaacc gtaattaacc tcttcccgaa
     8941 aggtaaagta catctcaacc ctgcacttat tgcaggaatg caaacccgaa tgggggaaga
     9001 gttgggtaga attatcaatt aaatcctgag ttaattttac ctaaactgtt tgctataatc
     9061 ttccgataag aaactcttat cggaaggaaa aatatgtaca cacttcaaga attaaagcag
     9121 atgaacgagc aagaaattcg ctctcgatta atctctcctg caattagaaa tgcaggatgg
     9181 tcggatagac aaattggcga agagtacaca tttaaaacca ataaacgatt tacagatggg
     9241 caagtagttg ttgatccaaa aacgacgcaa actaaacgca tcgaagcaaa acgggttgat
     9301 tatctgctct atacttccgc aaatcaaaaa attgccgtgg tcgaggccaa agataaccat
     9361 cactcttccc gacacggctt acagcaagca atgacatacg ctcgattgct tgatgtccct
     9421 tttgcatata gctcaaatgg tgatgagttt gtggaacacg attttatcac tggcgtacaa
     9481 cgaacccttc cgatgtcagc atttcctact cccgacgaac tccaccaacg ttgggcgaaa
     9541 caatatacca ccgaagagct gaaaattatt caacagcctt attacaccag tagcactgac
     9601 acctttaaag agcctcgtta ctaccaagaa attgcgatta accgtactgt tgaagctgta
     9661 gcaaaaggtc agcagaggat tttattggta atggcaacag gcacgggtaa aacctatacg
     9721 gctttccaaa ttatccatcg tttaaaaacc agtggtgcga aaaagaaaat tttatttctt
     9781 gccgatcgca atgtactagt cgatcagcca atgatgcaag acttcaaacc gtttaaagac
     9841 aaaatggtga aagtcagcaa taaaaagctc gacagtgctt atgaagtcta tcttgcactt
     9901 tatcaacagc ttgacggtga aaccgataac gaactgttta agcagttcca accctctttc
     9961 tttgatctta ttgtgatcga tgaatgtcat cgtggttcag caaaagaaga ttctgactgg
    10021 cgtgctattt tgaagtattt caaggacgcc acccatatcg gtatgactgc aacccccaaa
    10081 gaaaccgatg atgccagcaa cattacctat tttggcgagc cgatttatac ctatagcctc
    10141 aaacaaggta ttgaagacgg ctttcttgcc ccttatcgag tgattcgtgt tgatctggac
    10201 tgtgatttaa aaggctggcg accaaccaaa ggtttaaaag atcatcaagg taatgagatt
    10261 gaagatcgcc tctatacagt caaagatttc gattacaaca ttgtgctaaa tgatcgcacc
    10321 cgcttggttg cggagagaat ttgcgaattt ttacgcaaaa ccgaccgctt gcagaaaaca
    10381 atagtcttct gtgccaacat caaccatgca gagcgaatgg tggcagagct ttcacgcctc
    10441 aatgccgata tgttgaaaca caattccaaa tatgtctgcc aaattacagg cgaccaatca
    10501 ggcaaaggcg ttgatttaga agaattttgt gatgtagcaa atgaagggaa agattaccct
    10561 gtgattgccg taacctctaa attgatgaca acaggtgtag atagcaaaac ctgtaagctg
    10621 gttgtacttg atgcaaacat tcaatcaatg acggaattta aacaaattat cggacgaggc
    10681 actcgtcttc gccctgattt cggcaaagaa tttttcacca ttttagattt tcgaggcgtt
    10741 actcgcctgt ttgctgatcc ggcatttgat ggtgagccgg tggtgatttt agatgtaccg
    10801 gaaaataagc cacttgtcga acaaccgctt cctaaaccca gtgataagga catcattaaa
    10861 gaccccgagc taaagccata taaaatcccg gtagttgtcg atttcggcac actcaaatta
    10921 cgcattttag acgagaaagt ccaatatctg aatgagcagg gcgagctggt ttctgaagat
    10981 attgatctgt tctcaaaacg ggaaatgcaa aaagagttcg gcagttacga acagttccaa
    11041 cagcaatgga caacaagcgg tgaaattttc tcgaaatttt acaccgatcc aaaatggctg
    11101 gcagcccttc gccaaacacg ccaattcagc cacgatgttg aagactttga tgtattaagc
    11161 cacatctcct ttggcaaaaa accactgact aaaaccgaac gagcagaaaa agtgaaacaa
    11221 agtggctatg tggagcagta ttcgcccgaa aaccagcaag ttttagggtt gctgcttaat
    11281 gaatatgtca aatccggcaa tcaagatctg actaaaaccg aaattttaaa gacaccgcaa
    11341 ttcagccgtt ttggaggtct agtgtctatt attaaaaatt tcggcggtaa agaactctac
    11401 cagaaagcgg taaaaggctt agaaaagatg atttattcgg aataacaagc ggttatttta
    11461 caacaaaatt ttacagataa acaaggatca caatgagcct caacaacata gtaaaacgcc
    11521 tgcaagatgt aatgcgtaac gatgcaggga ttaacggtga tgcccaacgc attgaacaga
    11581 tcgtctggat cttattcttg aaaatttacg atgctaaaga acaagagtgg gaactggaaa
    11641 acgatgaata tcactcaatt ttgccgaatt ttttacgctg gcaaaattgg gcggaagata
    11701 aaaaagacgg caaagcgatg actggtgatg aattactctc tttcgtcaat aacgaacttt
    11761 tcccgacttt aaaaaatctg cctatttcag ccgatacgcc gatgaaccaa cggattatcc
    11821 gtgctgcttt tgaagataat aacaactata tgaaaaatgg ggtgttatta cgtcaggtta
    11881 tcaatatcat tgatgaaatt gattttgccc attaccaaga acgacacgcc tttggcgata
    11941 tttatgaaaa tatcctcaaa agtttacaaa gtgcaggtaa tgcaggggaa ttttataccc
    12001 ctcgcgctgt aaccgatttt atggtacaag caatcaaacc gaaacttggc gaacgcattg
    12061 ccgattttgc ctgtgggacg ggtggttttt taacttcggc gttaaaggta ttggaaagtc
    12121 aaattcaaac cctttctgac cgcactttat tcaataattc tgtgtatggc attgagaaaa
    12181 aagcccttcc tcacctgctt tgtattacca atttattgtt gcacgatatt gataatccga
    12241 atgtacatca cgataatgct ctagaaaaat cggtcaaaga ttacaccgaa aatgataaat
    12301 ttgatgtgat tttgatgaat ccaccttacg gaggttcaga aattgagcaa attaaaaaga
    12361 atttccctac ggctttacag agcagtgaaa ccgctgatct gtttatgtcg gtaattatgt
    12421 accgcctaaa acagaatgga cgggctgcgg tggtgctgcc tgacggattt ttgttcggca
    12481 cagataatgc caaagttgcg attaagaaaa agctattaga agagtttaat ctgcatacga
    12541 ttatccgctt accgcatagt gtctttgccc cttatacctc gattacgact aatattctgt
    12601 tttttgataa aaccgagcca acccgtgaaa cttgggttta tcgccttgat atgccacagg
    12661 gttataaaaa tttctccaaa actaaaccga tgaaattgga acatttcaac gaagttgttg
    12721 aatggtgggg aaatcgccaa gtgattgaag tcgaagggtt tgacaaagcg aaaagtttta
    12781 cattaaagga aatgtccgac cgtcaataca acctcgattt atgtggcttt cctcacgaag
    12841 aagaggaaat ccttccgcct gatgaactaa ttgcagatta tcagcgaaaa cgcaccgctt
    12901 acaatgctga tattgataag attctagcag aaattaccga tattttaggc attaaactgt
    12961 aataggagca taaaatgctg acttgggaac atatcgaaaa aatgattgca catcagcaat
    13021 ttatccgaga aaaggcagaa attgaatata aagaggcaaa aaatagtgtg ccaaaagatc
    13081 tttggcatac ttattcggct tttgcaaaca gcaatggtgg ctttatttta ttaggaataa
    13141 aggaaaatga acaaggacat tttcctgaac tgctaatttc tggtgttaat gatcctgata
    13201 aagtcattga tgaattattt tcccaatctc gtagtgaaaa agtcagtaaa tccttattaa
    13261 aggataatga tgtgaaaatc tttcaagttg aaaataaaag cgtgattgca atttatgtga
    13321 aagcagctga tattttagac cgtcctatcc atttaaatgg tgattatcga ctttcttatg
    13381 ttcgtttaaa ttcaggcgat cataaactca cctcctctga actgcgttct ttcatttcaa
    13441 gctatagcca aaaagatgct gatgggagaa ttgtgcctta tgcttctatt gatgatatca
    13501 gtttaagcac attggataaa tacagaaatc tgctgaaagc ccataacagc acatcaaaat
    13561 tacttacgtt atccgatgag aaattgctgc aagaaattgg ggcttataaa aaagatttag
    13621 cacagaatag cgagggcatt accaatgcag gcttattgat gtttggtaag cactatgcca
    13681 ttacaagcat atttccccac ttcttttttg aatattacga agaagctggt gatgtaaaac
    13741 gctatacatt acggattacc gattttgatc ttgaagaagg caatctcttt gaattttact
    13801 tgaaaattgt gccacttatt caagagcttg gtaaagataa acatttcaaa ttagataatt
    13861 taacccgtac tgaggaaaat gaaattactg acgggctacg ggaagctcta atcaatgcaa
    13921 ttactcacgc agattacttt aacaatgttc gccatctaaa agtcattaaa accaaagata
    13981 acaaactgat ttttgaaaat gcaggagtaa tgttggttga tattcccacg gctattgcag
    14041 ggcaaagatc ggaatgccgt aattctatta ttcataactt attccaccgt ttagggctat
    14101 gtgagcgaca aggacaaggc gttcgggata tttattcata ttggcaaagc cgaaatttca
    14161 attcaccgct tttagaaagt gaaattgatt acactaaact caccttaact tttcaatcag
    14221 gtatgattgc agattttgag gaaaaattta ccgcttgctt tggcgaaaat ttctctgagt
    14281 tacagcctat tcaaaaagat tgcttactct ttatcgcctt caatcaaggt aaagcaatgt
    14341 ttgcagaatt agcacaaaaa ctgccccaat atccacgcag aaatattact ttggcactag
    14401 cacgactgaa agaaaaaggc ttactaacca gttcggggag tccgagaaaa caactctata
    14461 ccctagtgaa tttagaatgg ataatcacag agaaatcaca agatgattat tttaatccac
    14521 ctttcgacca acttgataaa gctagtgaga gtaagggcgc ccccccgaag aaaagcaaag
    14581 tgaagcaagt caaacaatta ccccagaaca aagcaaacaa attacccccg aagtaaatcg
    14641 cttactttca gtgttgcttg agccgatgaa gagcaaagaa attatgaaaa aactcaggtt
    14701 aaaagatgat aagcatttcc gtatgcagta tttaaaacct gcactaacgc ttggtgtgat
    14761 cgaaatgcaa ttcccagaaa acccaaaaca ccgtaatcaa agatacttta agaaataaca
    14821 accgattatt gagaataaaa aatgaaagcc caacagctaa aaaacgcaat cctacaacta
    14881 gcaatccaag gcaagctcgt tccacaagat ccaaatgatg aaccggcaag cgaactcctt
    14941 tgcaaaatcc aagcagaaaa agaccgcttg attgcagaag gaaagatcaa aaaaaacaaa
    15001 aaaactgccg ataaagcccc ttataccatt gaaccacctt ttgagattcc tgagagttgg
    15061 gtgtgggtga ggttggggga tatatgccta aaaattacag atggaactca tcattctccc
    15121 ccaaatatcg ataagagtga ttttctttat attacagcta aaaatataaa gaaagatgga
    15181 ttagatttat caaaaattag ctatgtaaca aaagaaattc ataatgaaat tttcagccgt
    15241 tgtaatcctg aaaagggaga tattctatat attaaagatg gagccacaac tggagtaagt
    15301 attataaata ctcttaatga gccatttagt atgttatcca gtgttgcctt aattaagacc
    15361 tcacaagaaa tagataatga gtacttaaat tatgtaatga atagtcatta tttttataac
    15421 atttctattg gaagtatgtc tggaacaggt attccaagaa taacattaac taaattagaa
    15481 tcttatttag tcccagttcc gccactccta gaacaacagc gcattgtgca aaaaatcgag
    15541 gaattattac cgcttgttga acgctacgag caaaccgaac agcaactcac taaactcaac
    15601 aatacattcc ccgaacagct gaaaaaatcg gtgttacacg cagctattca gggtaaatta
    15661 accgagcaag atccgaatga tgaactggca tcttgcctga ttgagcggat aaaagcggag
    15721 aaaaatcgtc ttattgccga gaaaaaactc aaaaaaccaa aaagtgtttc agagattgta
    15781 atgcgtga
//
LOCUS       DANLXO010000065        15595 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.065, whole genome shotgun sequence.
ACCESSION   DANLXO010000065 DANLXO010000000
VERSION     DANLXO010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15595
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.065"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            504..851
                     /locus_tag="PXD69_001690"
     CDS             504..851
                     /locus_tag="PXD69_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283874.1"
                     /translation="MFREEAIEYQSKKWKSTAVLFSRVPALVVFSISFFIFTAFILFI
                     VFGNYTRRETVVGELVMQSHPILLSAPKSGYISENYIQPHQQVKKRAIRWLKLRWIEL
                     RIAKILMLILFFR"
     gene            848..1765
                     /locus_tag="PXD69_001691"
     CDS             848..1765
                     /locus_tag="PXD69_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDL6283875.1"
                     /translation="MKSQIQATEQAITALYKNKSETINSLEKQIKNSQKIYQDKQSYL
                     VEIEKSMNDYAELVKRYEKLLKVGHSSHDEVNIQKSRYFQQKSLFNELKQELIQLKST
                     QLSLENEIETRKTEFNNQIIRYEMQKSDLNIRLMEFESVSDIIVNASLDGKIESTSVT
                     VGQIIKENDPLAQILPQNKGNYQLVMWVPNSAISFIKQGDEVNIRYEAFPFEKFGQFK
                     GKITSISTLPASLQELSFYKNLPVNLEQGIPLYKILIELADQNVKYNDTSLYFMSGMK
                     AEATLFLEKRKLYEWIFFPMYQLRKNMEQ"
     gene            1765..2556
                     /locus_tag="PXD69_001692"
     CDS             1765..2556
                     /locus_tag="PXD69_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HDL6283876.1"
                     /translation="MTGIKQLKFDFRRRIPVILQTETAECGLACLAMMLGYYDKNTNL
                     FELRSQYGTSSRGVTLHTLISIANDCGLITRPLSLELDEVPQLRLPCILHWDFNHFVV
                     LTHASEKQFIIHDPAFGKRKLSRAEFSNHFTGVALEVWSEVKFEKSNNENTISLYETL
                     KHISGIKGALVKIFALSMLIELIALLMPIGTQLVMDHVMQAKDQSLLLIICIGLFLFT
                     LFRTMVSMFRAWVSLKMNYLIDFQWTASFFSHLLKLPLDFFENAK"
     gene            2934..3851
                     /locus_tag="PXD69_001693"
                     /pseudo
     CDS             2934..3851
                     /locus_tag="PXD69_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167835.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(3853..4521)
                     /locus_tag="PXD69_001694"
     CDS             complement(3853..4521)
                     /locus_tag="PXD69_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDL6283877.1"
                     /translation="MKYLYALIFSLFFSSVYAAERQLQCKVVGISDGDTLTCLVNKTP
                     LKIRLQHIDAPEQAQPYGNKAKQALAQFVFQQNITAIVSGYDRYQRLLATLYLNDKNI
                     NLALVENGMAWAYTTKREYIEAQDQAQQAKIGLWQDKFPINPSQWRKTHTSTLPQAVK
                     KPENIANQPPTIDCQIKLSCNQIGNYAQAKRYFQQCGWKELDGNNDSIPCNKLYRQEQ
                     KNRN"
     gene            complement(4565..5932)
                     /locus_tag="PXD69_001695"
     CDS             complement(4565..5932)
                     /locus_tag="PXD69_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDL6283878.1"
                     /translation="MSIDTILNQINSFVWGPPLLILISGVGLYLTFSLKGIQLSQLGQ
                     AFRYMFKPEKGKGQSGDISAFAALSTALAATIGTGNIVGVATAIHSGGPGALFWMWLI
                     ALFGMATKYAEGLLAIKYRTKDRAGFVAGGPMYYIELGMGKKWRWLAKAFAFFGVLVA
                     LLGIGTFPQVNGITHALESTFDVPIIFSAIILTLIVTAIILGGVQRISKIATIVVPFM
                     AIGYVIAALSVILLNMEKVPQAIITIVHAAFNPQAALGGAVGFTVMQAIQLGVARGIF
                     SNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIIVCTMTGLVIVISGAWAGDVK
                     GAELTTTAFTQGLNSSFGAIIVTVGLVFFAFTTILGWCYYGERCFVYLTRGRTQYIKL
                     YRLLFIALIASAPFLQLDTIWTLADIVNGLMAFPNLIALIALRKVIISETKDFFARLK
                     TGKAE"
     regulatory      complement(6051..6146)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(6317..7369)
                     /locus_tag="PXD69_001696"
     CDS             complement(6317..7369)
                     /locus_tag="PXD69_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL6283879.1"
                     /translation="MTHSTKTLVAIASIIIILAGIKLSNEIVVPFLLSLFIAIICSPM
                     IKFMTKRKVPLWLAITILLIVFILGFSFLAGIINNTLQEFTNAIPQYKIQLSSRIQVI
                     LELAHRWHIPLTLSQEEIMSKFDPSSIMNLVSKLLMGLSGALSNIFVIFLVVIFMLLE
                     MPVAKYKLALALSPDDDLSNEKEYINQVLEGVIGYLGVKTFVSLLTGGLVWILLEILG
                     VEYAILWAILTFLLNYVPNIGSILAGIPIVIQALVLNGFSIGLGTLIGIVVINMVVGN
                     ALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMACKVALESNKATQKYA
                     VLFSDLEEVPKEQKYR"
     gene            complement(7416..7841)
                     /gene="ruvX"
                     /locus_tag="PXD69_001697"
     CDS             complement(7416..7841)
                     /gene="ruvX"
                     /locus_tag="PXD69_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDL6283880.1"
                     /translation="MTETTTKTVIAFDFGTNSIGCAVGQSITGTAQGLTTFKAQDGIP
                     NWEEIGKLLQDWKPDMLVVGLPLNMDGTEQPLTQRARKFANRLNGRFNLPVELQDERL
                     TTVEAKAEIFSRGGYKALKKDKVDSISACLILESWFENH"
     gene            complement(7841..8401)
                     /locus_tag="PXD69_001698"
     CDS             complement(7841..8401)
                     /locus_tag="PXD69_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HDL6283881.1"
                     /translation="MLENLQGKFLIATPEMDDDYFERTVVYICEHNPQGAMGVVINTP
                     TDLSVLELITRMDFQMANQRDYKKDQMVLSGGPVNQDRGFIIHTKTANDFIHTYPITD
                     KITLTTSGDVLDSFGTLASPEKFIVCLGCSTWRGSQLEQEIAQNYWIVSDANEKTLFE
                     TGYLERWAEAYEMMGLSSIPSRAGRA"
     gene            complement(8401..9132)
                     /gene="rsmE"
                     /locus_tag="PXD69_001699"
     CDS             complement(8401..9132)
                     /gene="rsmE"
                     /locus_tag="PXD69_001699"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDL6283882.1"
                     /translation="MRIPRIYQPQPLAGLQSCVLSEDAANHVGRVLRMKQGEQIILFD
                     GSNHVFHATLQAVEKKQIIAKIDSSELDDRESNLPIHLGQVISRGDRMEFTIQKSVEL
                     GVKTITPLWSERCGVKLNDERQDKKLQQWQKIAIAACEQCGRNEIPEIRPIMKLTDWC
                     KEQDDMLKLNLHPRAKYTIRELPNVPKAGVRLLIGSEGGLSAEEIAMTESEGFTEVLL
                     GKRVLRTETASLAAITALQVCFGDI"
     gene            complement(9192..9482)
                     /locus_tag="PXD69_001700"
     CDS             complement(9192..9482)
                     /locus_tag="PXD69_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6283883.1"
                     /translation="MPKKLHNIYYTEEALIDLENIAISVSEFTGYASSGIRILEELEN
                     SINNLAIFPTMGVKGAIINTRELYHNGYRIVCEVKENEISIITIVHCSRLYP"
     gene            complement(9463..9636)
                     /locus_tag="PXD69_001701"
     CDS             complement(9463..9636)
                     /locus_tag="PXD69_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283884.1"
                     /translation="MNNPYHNVSQEYLDYLAKKVKQGKEDIKNGRIYSPEEVRKRVIA
                     AAFRGAENAKKVA"
     gene            complement(9808..10395)
                     /locus_tag="PXD69_001702"
     CDS             complement(9808..10395)
                     /locus_tag="PXD69_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283885.1"
                     /translation="MKRSKKTLVLATTFVAALLAGCQSQSNTLTFSTPTPTAVFNTNN
                     QTAAVNVMTQDLRTSREIASYTKNGEVIRLTAVPEVAAMFQQAVQQDLNAKGFQIVQG
                     AANANVVVNIRKFFATVEQGNLRYKADAQVSVKVAVQGSKGNFSKNFNATRGYEGAFG
                     ASNDEIKKVLDQAYSDVVKAIYNDNEIANAIHQFK"
     gene            10487..10798
                     /locus_tag="PXD69_001703"
     CDS             10487..10798
                     /locus_tag="PXD69_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL6283886.1"
                     /translation="MSVEQTIIQKIKTEFQPIFFNVENESYMHSSGRGAESHFKLTLV
                     SDKFEGQRTVARHRAVYACLAEELANGVHALALHLYTQGEWEATGGLVPKSLNCLGVG
                     Q"
     gene            10890..10979
                     /locus_tag="PXD69_001704"
     tRNA            10890..10979
                     /locus_tag="PXD69_001704"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10924..10926,aa:Ser,seq:gga)
     gene            complement(11155..11529)
                     /locus_tag="PXD69_001705"
     CDS             complement(11155..11529)
                     /locus_tag="PXD69_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein NlpE N-terminal
                     domain-containing protein"
                     /protein_id="HDL6283887.1"
                     /translation="MKKIALIGFTTAMLGACSLLPQKSVSGTYAGELPCADCEKIQAQ
                     LTLNADKTYQYDTVYFKDKKEYTYRDKGTYSWEPNKPNVIRLEKASGNLAFQVSEQHV
                     ELCDPNGNTVKNSNNYKLGKVR"
     gene            complement(11554..11856)
                     /locus_tag="PXD69_001706"
     CDS             complement(11554..11856)
                     /locus_tag="PXD69_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HDL6283888.1"
                     /translation="MKNSAPKKINDILQNSSLSRIVEKANFINDLNQKIQKRWPESYR
                     GLYRVVNLVDNQLIVSVKNATVRQGLILQQNMLLKQIQTDLPEITQLEFRVNPSVT"
     gene            11977..12297
                     /locus_tag="PXD69_001707"
     CDS             11977..12297
                     /locus_tag="PXD69_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2547 family protein"
                     /protein_id="HDL6283889.1"
                     /translation="MSLFLKHFHRTPFWSQLFLGMVAILALPEIQVAYANESEQETVL
                     NQSFLQYAQSANDIEQQSLFIAELIHKIVEIKPQAVHFCEFFANSYRLDRQNAYPIRA
                     GPQT"
     gene            12356..15082
                     /gene="secA"
                     /locus_tag="PXD69_001708"
     CDS             12356..15082
                     /gene="secA"
                     /locus_tag="PXD69_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDL6283890.1"
                     /translation="MISKLLTSIFGSSNDRTLKRLRKRVAQINKLEPTFEQLSDEALK
                     DKTAEFKQRLADGVSLDSLLPEAFATVREASKRVLGMRPFDVQLIGGMVLTGRNIAEM
                     RTGEGKTLTATLSCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLTVGVNIPG
                     LPSDAKRAAYQADITYSTNSELGFDYLRDNLAHDKNERFQRELHYALVDEVDSILIDE
                     ARTPLIISGPAEDATQIYQAVDQIIPHLIAQDKEDSEEYTGEGDFTLDLKNKQAHLTE
                     RGMVKVEDFLTQMGLMEEGESLYHPARISLLHHVSAALRAHKLFERNVDYIVKDGEIV
                     IIDEHTGRTMAGRRWSDGLHQAIEAKERVAIQGENQTVASITYQNYFRLYEKLAGMTG
                     TADTEAFEFQQIYGLNTVVIPTNRPVIRDDRTDLMFKSEAEKFAAIITEIRDCIERKQ
                     PVLVGTASVEKSELLSAELTKAGIAHNVLNAKFHAQEAEIVAEAGAPGAVTIATNMAG
                     RGTDIVLGGNWKMEVAKLENPTQEQIDAIKAAWQERYDIVMQAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFTEEGEAMESKLLT
                     KVIASAQAKVEAHNFDGRKHLLQYDDVANEQRKVIYEQRNHLLETDNIASMIESIRQD
                     VFESTINQYIPPQSIEEMWNVPGLEERLRREFGLDLPISHWLETEKDLHEETLRERIL
                     NIAIAEYNAKEEIVGAEVMRNFEKGVMLQNLDELWKEHLASMDYLRKGIHLRGYAQKD
                     PKQEYKKESFAMFTNMLDTLKLNVISILSRIQVRSKEEVEEAQRQQAEMDAASTPVTQ
                     ATDSAAGSREENSAESLSEEELANLNIGRNDPCPCGSGKKYKHCHGNKARYS"
     gene            15169..15567
                     /gene="mutT"
                     /locus_tag="PXD69_001709"
     CDS             15169..15567
                     /gene="mutT"
                     /locus_tag="PXD69_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HDL6283891.1"
                     /translation="MSKPIIQVSAGIIRNEFGQIYLTQRLEGQDFAQSLEFPGGKVDP
                     NETPEEALKRELEEEIGIQVLSAFPYENFCFEYPTKIIEFFFYLVEEWVNEPYGREGQ
                     EGFWIAQSDLDEGAFPPANAQLIKRLKEHA"
BASE COUNT         4695 a         2873 c         3151 g         4876 t
ORIGIN      
        1 ggtatcgatg ttgctattga ttcttaggac gttattacct ttaataatgt tatctgcttg
       61 tgctgactat caagaatatg ataaaaagga tagtaaatgt tattattctt cctatggaag
      121 tggagaggca aaagattctg ttaggaaaag aatagagtat aatagatgtt taagagagaa
      181 taagccttat ttcataagtg gcaatcattg aataatatat cttgtctgta tagatgtaag
      241 attaattaat gtatgtaact aaattttatt gcgagtgttt tatgagattt gttactgtaa
      301 tttatattgc gtttatttat tttatgattt acagattcgt ttatccatta ttaccattcg
      361 agtgtaatac agaagtttat gatatagtgt tgttttgctt tttgtttact tattctcttc
      421 ttaagaagta acatgtttat aagattagct tttaatgtat ataaaataaa tgtgctaatg
      481 tagtagtgta aaattggtat tatatgttca gagaagaagc tattgaatat caatcgaaaa
      541 aatggaaaag cacagctgta ctatttagca gagttccagc tttggttgtc ttttccattt
      601 ctttctttat ctttactgcc tttattctat ttattgtgtt tggtaattat acccgccgtg
      661 aaacggttgt gggtgaatta gtgatgcaat ctcatccgat tttattatct gccccaaaat
      721 ccggctatat atccgaaaat tatattcaac cacatcagca ggtaaaaaaa agggcgatcc
      781 gctggttaaa attacgctgg atagaattac gcatagcgaa aatattaatg ttaattctat
      841 tctttcgttg aaatcacaaa ttcaagcaac agaacaagcg ataactgctt tatataagaa
      901 taaatcagaa actattaata gccttgaaaa gcagatcaaa aacagtcaaa aaatttatca
      961 agataagcag agttatttag tggaaattga aaaaagtatg aatgactatg cggagttggt
     1021 taaacgctat gagaaattat taaaagtagg gcattccagc cacgatgaag tgaatattca
     1081 gaaaagccgt tatttccaac aaaaatcact gtttaatgag ctaaagcaag aattaattca
     1141 attaaaatcc acccaactta gcttggaaaa tgaaattgaa acccgtaaaa ccgaatttaa
     1201 taatcagatt attcgctatg aaatgcaaaa aagcgattta aacattcgtt taatggaatt
     1261 tgaatctgtt tcagatatta ttgttaatgc ctctttagat ggaaaaattg aaagtaccag
     1321 cgtaacagtt gggcaaatta ttaaagaaaa tgacccgctt gcacaaattc tgccacagaa
     1381 taaaggaaat tatcagctag tgatgtgggt accgaatagt gccatttcat ttattaaaca
     1441 aggcgatgag gtgaatattc gctatgaggc ttttccgttt gaaaaattcg ggcagtttaa
     1501 gggcaaaatt acgtcaattt caaccttacc agcttctttg caagaactta gtttttataa
     1561 aaatctccct gtaaatttag agcaaggtat tccgctttat aaaattctga ttgagcttgc
     1621 cgatcaaaac gtaaaatata atgatacctc cctttatttt atgagtggaa tgaaagccga
     1681 agccacgtta tttttagaaa aacgtaaact gtatgagtgg atatttttcc ctatgtatca
     1741 attacgcaaa aatatggagc aataatgaca ggaattaagc agttaaaatt tgattttcgg
     1801 agaagaatac ctgttatttt gcaaactgaa acagctgaat gtggcttagc ctgtttagcg
     1861 atgatgttgg gctattacga taaaaacacc aatttatttg aattgcgaag tcaatatggt
     1921 acttcctctc gtggcgtaac gctgcatact ttaatttcta ttgcaaatga ctgtggttta
     1981 ataactcgcc ctctttctct agagttagat gaagtaccac aacttcgtct gccttgtatt
     2041 cttcattggg attttaatca ttttgtagta ttaactcacg caagtgaaaa acagtttatt
     2101 atccacgatc ctgctttcgg taaacgtaaa ttatcccgtg ctgaattttc caaccatttt
     2161 accggagtcg ctttagaagt ttggtctgaa gttaaatttg agaaaagcaa caatgaaaat
     2221 accattagtt tgtatgaaac cttaaagcat atttctggca taaaaggtgc attagtgaaa
     2281 atttttgccc tttcaatgct cattgaactc attgccttat tgatgccaat tggaacacag
     2341 ttagtgatgg atcacgttat gcaagcgaaa gatcaatcat tacttttaat tatctgtatt
     2401 gggctatttt tatttaccct ttttcgcaca atggtcagta tgtttagggc ttgggtttcc
     2461 ttgaaaatga attatttaat tgattttcaa tggacagcca gtttcttttc tcatctctta
     2521 aaattaccgc ttgatttctt tgaaaacgcc aagtaggtga tattcattcc cgatttagtt
     2581 cattaaaaac cattcagaaa actctaactt caagcattat taccacgatt attgatacga
     2641 ttatgataat cagtttaatt attatgatgg tgttatatgg cggttggctc ttttgggtag
     2701 tattagcttt ttcctttatc tattttattc ttcgaatggt tacttattta gtttatcgtc
     2761 aactgaatga agagcagatt attaaaggag caaaagccca ttcgcatttt atggaaactt
     2821 tatatggtat tacaacgtta aaatcattag gattggaaaa taaacgacaa gaacagtgga
     2881 tgtcgctcaa tgcggatgct tttaacacat caattaaggt aactaaattt gatatgctgt
     2941 tttccggtat tcataccttt atttctacca tcgaacagat tttaattctt tggattgggg
     3001 cgacaatgat gattgaaaat gtgatgacat taggaatgtt tgtcgctttt aatgcctatc
     3061 gaggctcttt ctcttcacga atggggaatt taattgatat tatttttagc ctaaaaattc
     3121 tttcattaca tagagagcgg attgcagaca ttgctttaaa tgaagtcgaa gatgaaagta
     3181 aatatcaaga actcagattt gaacataacc aaacagatat agaagttaaa gacctttgtt
     3241 tcaaatacga tcctttttct aaaaatgtgc ttgaaaatgt caatttagtg atcagaagtg
     3301 gggaaagtgt tgctattacc gcaccatcag gttatggcaa aacaacgtta ttaaaattaa
     3361 ttgcaggttt attaaaacca acctcaggtt ctgtgtattt taacggcatt gatatttatc
     3421 agttaggatt aagtcaatat cggagccaaa ttgcttgcgt attacaggaa gataaattct
     3481 tttctggttc cattttagag aatattgtta gttttgaaag taattatgat cgagaatggg
     3541 ctatcgaatg tagcaaactt gcgaatattc acaatgatat tatggcaatg ccgatgaatt
     3601 atgaaacctt attaggagaa ttaggaaata atttgtctgg cggacaaaga taacgattgt
     3661 ttattgctcg agctttatat aaaaagccta aaattctttt gatggatgag gcgactagcc
     3721 atttagatga agaaaatgag aagcttgtca atcaagctat ttcacgaatg aagataacaa
     3781 ggattattat tgctcataga caatcgacta ttcagtcggc ggatagaatt attgccctga
     3841 atgacaggta aattaattcc tatttttctg ttcttgccga taaagtttat tgcacggaat
     3901 gctgtcgttg ttgccgtcta gctctttcca gccgcattgt tgaaagtagc gttttgcctg
     3961 tgcgtaattg ccgatttggt tgcagcttaa tttaatttgg caatcaatcg ttggtggctg
     4021 gtttgcaata ttttccggtt ttttgaccgc ttgtggtaag gttgaggtgt gtgtttttcg
     4081 ccattggctc gggttaatcg ggaatttgtc ctgccataag ccgattttag cttgctgtgc
     4141 ttgatcttgt gcttcgatat attcccgctt tgtggtgtaa gcccacgcca taccgttttc
     4201 cactaaggct aagttgatgt ttttatcgtt taagtagagg gtggcaagta atcgttggta
     4261 acgatcatag cctgaaacta tggcagtaat gttttgttga aacacgaatt gagccagagc
     4321 ttgtttggct ttgttgccgt aaggctgcgc ttgttcgggg gcatcaatat gttgtagcct
     4381 tatttttagt ggtgttttat tgaccaaaca agtgagggtg tcgccatcgc taatgccaac
     4441 gactttgcat tgtagttggc gttcggcggc atataccgat gagaaaaata agctaaaaat
     4501 cagggcgtaa agatatttca ttattaaaaa agagagggct aataagccct cattctatca
     4561 ttttttattc ggctttacct gttttaaggc gagcgaagaa atcttttgtt tcactaataa
     4621 tcactttgcg taacgcaatc aatgcgatta aattcgggaa tgccattaag ccgttcacga
     4681 tgtctgccag cgtccaaatt gtatcgagtt gtaaaaatgg agcagaggcg atgagtgcaa
     4741 taaacagcaa gcggtataat ttaatgtatt gggtgcgacc tcgagtgaga tagacaaaac
     4801 agcgttcacc gtagtagcac cagcctaaaa tggtggtaaa ggcaaagaag actaaaccaa
     4861 ctgtcacaat tatcgcaccg aatgagctgt ttaaaccttg agtaaaagcg gttgtggtga
     4921 gttctgcgcc ttttacatcg cctgcccaag cccctgaaat cacaattact aagccggtca
     4981 ttgtgcagac gataatagtg tctaagaacg tgccggtcat tgaaattagg ccttgacgta
     5041 ccggctcttt ggtttgggcg gcagcggcgg cgatgggggc agagcctaat cctgattcat
     5101 tcgagaaaat accacgtgca acccctaatt gaatcgcttg catgacggtg aatccgactg
     5161 ctccgcctaa tgccgcttgt gggttgaaag ctgcgtgtac aatagtaata attgcttgtg
     5221 ggactttttc catattcagt agaatgacgg ataaagcggc gatgacatac ccaatagcca
     5281 taaacggtac aacaatggtt gcaattttag aaatccgctg cacgccacct aaaataatag
     5341 cggtaacgat aagggttaaa atgatcgcac tgaagataat cggcacatca aaggtgcttt
     5401 ctaaggcgtg ggtaatgcca ttcacttggg ggaacgtgcc aataccaagc aaagcgacca
     5461 atacgccaaa aaacgcaaag gctttagcaa gccaacgcca tttttttccc attcccagtt
     5521 cgatatagta catcggacca ccagccacaa atccggctct atctttagtt cgatatttaa
     5581 ttgccaataa gccttcggca tatttcgtag ccataccgaa taaggcaatc agccacatcc
     5641 aaaataatgc tccaggcccg cccgaatgaa tagcggttgc cacgccgaca atattccccg
     5701 tgccgatagt agctgctagg gcagtggaaa gggctgcaaa agcggaaata tcgcccgatt
     5761 gccctttgcc tttttccggt ttgaacatat agcgaaaggc ttgccctagt tggcttaatt
     5821 gaataccttt gagtgaaaag gttaaatata accctacgcc tgaaattaaa atcaggagtg
     5881 gcgggcccca aacaaaactg ttgatttgat taagaatagt gtcgatagac atttgatgtt
     5941 cctcgtaaaa actgcttaca aggaaagaaa aggaatgcaa gagacaagcg gtcaaaaaac
     6001 ggaaattttt tgcaaagaat tagcaaaaaa acaccgcttg tatcgtataa cttttctccc
     6061 ctgtcctttt gcctgagcgt ttcacacatt gctgtatttt cgccttcggc ggcggatttt
     6121 aatccgctct ctccaagggt tcgtccagta acagtccccg cagtgttcac tgcacctgaa
     6181 agagtttacc tcgtcggtga aatgttaatt catttctctc cagctacctt catccgaaca
     6241 atctaattta ttttataatg taaaataaaa aagatttgcc aaattctagc aactcttttg
     6301 cttccgtcaa gtgaatttaa cgatattttt gttctttcgg tacttcttct aaatcgctaa
     6361 ataatacggc atatttttgg gtggctttat tggattctaa tgccacttta cacgccatcg
     6421 taagtggaac agaaagtaac attcctacgg tgccaagtaa ccacccccaa aatagaagtg
     6481 agaggaacac tacaagggta gaaagcccga gtttcttgcc cattaattta ggttcaagcg
     6541 cattacccac aaccatatta atcacgacaa tgccgattaa agtgcctaat cctatagaaa
     6601 agccattgag taccaaggct tgaatcacaa ttggaattcc cgccaaaata gagccgatat
     6661 tcgggacgta gttaagcagg aaggttagaa ttgcccataa aatcgcatat tctacgccta
     6721 gaatttctag taagatccaa actaaccctc cggtgagtag gctcacaaag gttttaactc
     6781 caaggtaacc aatcacccct tcaagtactt ggttgatata ctctttttcg ttgcttaaat
     6841 catcatctgg gctaagtgcg agggctaatt tatatttggc aaccggcatt tccaatagca
     6901 taaaaatgac gactaagaaa atcacaaaaa tattcgataa tgcaccggat agccccatta
     6961 gcagtttgct gaccaaattc attattgagc ttgggtcaaa tttgctcata atctcttctt
     7021 gtgagagggt aagtggaata tgccatctat gggcgagttc tagaatcacc tggattctag
     7081 atgaaagctg aattttgtat tgcggaatag cattagtaaa ttcttgcaag gtgttattaa
     7141 taatgcctgc taagaaactg aatcctaaga taaaaacaat aagtaaaatg gtaatggcta
     7201 accataatgg cactttacgc ttagtcataa atttgatcat tggtgaacaa ataatggcaa
     7261 taaatagcga aagtaaaaat ggcacaacaa tttcattgga taatttaatc cctgccagaa
     7321 taatgataat ggaggctatc gccacgagag ttttggtgga atgtgtcata atttttcctt
     7381 ttacaagcgg ttaaaaatca gcaatttttt acaaattagt gattctcaaa ccaactttct
     7441 aaaattaaac aagcggaaat ggaatccact ttatcctttt ttaatgcttt gtaaccacca
     7501 cgagaaaaaa tttccgcttt tgcttcaaca gtagtgaggc gttcatcttg tagctcaacc
     7561 ggcagattaa agcgtccgtt taagcgattg gcaaattttc tggcacgctg agttaaaggc
     7621 tgctctgtgc cgtccatatt caagggtagc ccaacaacca gcatatctgg tttccaatct
     7681 tgcaagagtt ttccgatctc ttcccagttt ggaataccgt cttgggcttt aaatgtagtt
     7741 aaaccttgag ctgtgccggt aatactttgt ccaactgcac agccgatgct atttgtgcca
     7801 aaatcaaagg caatcacggt ttttgttgtg gtttctgtca ttaagctctc ccagctcttg
     7861 acggtatgct tgaaagcccc atcatttcat aggcttctgc ccaacgctct aaataaccgg
     7921 tttcaaacag cgttttttca ttcgcatcag acacaatcca ataattttga gcaatttctt
     7981 gctcaagctg gctgccacgc caagtggaac aacctaaaca cacaataaat ttttcaggtg
     8041 aagccagtgt gccaaaggag tctaacacat caccggaggt agtgagcgta attttatcgg
     8101 tgatcggata agtgtgaata aaatcattgg cggttttggt gtgaataata aagccacgat
     8161 cttgatttac cggcccaccg cttaacacca tttggtcttt tttgtaatca cgctggttcg
     8221 ccatttggaa atccattcgg gtaatcagct ctagaaccga cagatcggta ggagtgttaa
     8281 ttactactcc cattgcacct tgcggattat gttcgcaaat atagaccacc gtacgctcga
     8341 aatagtcatc gtccatttcc ggcgtggcaa ttaaaaattt accttgtaaa ttctctaaca
     8401 ttaaatatct ccaaaacaaa cttgtaacgc agtaattgcc gcaagtgagg cggtttctgt
     8461 gcgtaacact cgtttaccca gtaatacttc agtaaaacct tcgctctcgg tcatggcgat
     8521 ttcttcggca gataatccgc cctcagagcc aatcagtaaa cgaacaccag ctttcggcac
     8581 attcggcagt tcacgaatgg tatatttggc tcttgggtgc aaattcagtt tcaacatatc
     8641 gtcttgttct ttgcaccagt cggtgagttt cataatcggg cgaatttcag ggatttcatt
     8701 tcgtccgcat tgttcacagg cggcaatcgc aattttctgc cattgctgta attttttatc
     8761 ttgccgttca tcattgagtt tcacgccaca acgttccgac caaagtgggg taatagtttt
     8821 tacccccagc tccaccgatt tttgaatggt aaattccatt ctatcgcctc gggaaatcac
     8881 ttgccctaaa tggatcggca ggttggattc tcggtcatct aattcacttg aatcaatttt
     8941 tgcaataatt tgcttttttt cgaccgcttg taacgtagcg tggaaaacgt ggtttgaacc
     9001 atcaaataaa atgatttgct ctccttgttt cattcgtagc actcgcccaa cgtggttagc
     9061 ggcatcttca cttaacacgc aactttgaag accagctaac ggctgtggtt ggtaaattct
     9121 tgggattctc ataattatct agttataaat taaaggcaga cgattgtctg ccataggtaa
     9181 gttaaaacgg gttaaggata aagtcttgaa caatgcacaa tagtaataat cgaaatttca
     9241 ttctctttaa cttcacacac tattctatag ccgttatgat atagttctct cgtattaata
     9301 attgcacctt ttacacccat tgtaggaaaa atggctaaat tattaatact attttccaat
     9361 tcttctagta tcctaattcc actacttgca taaccggtaa attcactaac tgagatggca
     9421 atattctcta aatctattaa ggcctcttca gtataataaa tattatgcaa cttttttggc
     9481 attttcagca cctctaaaag cggcagcaat aactcttttt ctgacctctt cgggtgaata
     9541 aatccgaccg tttttaatat cttcctttcc ttgctttact tttttagcaa gataatcaag
     9601 atattcttgg ctaacattat gataaggatt attcatattt ttcctccctg cgatgagtct
     9661 ctattgtggg ggctactgat cgtttaatca agttaattta tcttattttt cgagccacat
     9721 cacaaaacga gaaaacaaca agcggtcatt tttccacgtt ttttgcaaaa aatcgaagaa
     9781 agatgaccgc ttgccagaaa aaattaatta tttgaactgg tgaattgcat tggcgatttc
     9841 attatcgttg taaatagctt tcaccacatc agaataggct tggtctaaca ctttcttgat
     9901 ttcatcattg cttgcaccaa atgcaccttc gtaaccacgg gtagcgttga agtttttgct
     9961 aaagtttcct ttagaacctt gcactgccac ttttacactc acttgtgcat cggctttgta
    10021 gcgtaagttt ccttgttcta ctgtggcaaa gaatttacga atattcacta ccacattggc
    10081 attcgctgca ccttgtacaa tttggaaacc ttttgcattc aggtcttgtt ggacggcttg
    10141 ttggaacatt gcagcaactt caggcactgc ggttaaacga atgacctctc cgtttttagt
    10201 gtagcttgcg atttcacgcg aggtgcgtaa atcttgtgtc attacattca ccgcagccgt
    10261 ttgattgttt gtgttaaata cagcagttgg cgttggggta gagaatgtta atgtgttgga
    10321 ttggctttgg cagccggcta gtaatgcggc aacaaaagta gtggctaaca ctaacgtttt
    10381 tttagagcgt ttcatagtaa atccttctat attgaataaa tttcgagaaa atttctgctt
    10441 agtatagtat tatttcgttt tgattttcaa tgaacgagag caaaaaatgt cggtagaaca
    10501 gacaattatt caaaaaatta agacagaatt tcagccgatt ttctttaatg tcgaaaacga
    10561 aagctatatg cacagctcag gtagaggagc agaatcgcat tttaaattaa ctttggtgtc
    10621 agataaattt gaagggcaga gaacagttgc acgtcatcgt gctgtctatg cttgcttagc
    10681 tgaggaatta gctaatggcg ttcacgcact tgctttgcac ctatataccc aaggtgaatg
    10741 ggaagcgact ggcggacttg tacctaaatc gctaaattgc ttaggtgttg ggcaataagt
    10801 ggataaaaat gatttatttt attttgtgaa gaaaatactt gaaagagccg tgtaaaattg
    10861 ctatatttac gccatctttt tgttgattcg gtgagatgtc cgagtggttg aaggagcacg
    10921 cctggaaagc gtgtatatgg gaaactgtat cgggggttcg aatccccctc tcaccgccat
    10981 tcatactgaa agattcctta ctgttttcat agatatttcc ttggttaagt taaagtagat
    11041 aatacttttt catttttagg ttatccccga gcaaacattg cttgggggtt tttttatgcg
    11101 atcggcgata gattacaaag aaaaaggatt cctaagaatc ctttttatct gcttttaacg
    11161 tactttacct agtttatagt tattgctgtt ttttaccgtg ttgccatttg ggtcgcaaag
    11221 ttcaacgtgt tgttcagaca cttggaaggc aagattgcct gatgcttttt ccagacgaat
    11281 cacatttggc ttattgggtt cccaactgta tgtgcctttg tctcggtaag tgtattcttt
    11341 tttatcttta aaatataccg tatcatattg gtaggtttta tctgcattta aggttagctg
    11401 ggcttggatt ttctcacagt cagcacacgg taattcacct gcataagtac cgctaacgct
    11461 tttttgtggt agcaatgagc aagcccctag cattgcggtg gtaaaaccaa tgagtgcgat
    11521 ttttttcata ctattttcct cttcaaaatt aaattatgta acactcggat ttactctaaa
    11581 ttcaagttgg gttatttcag gtaaatcggt ttgtatctgt tttagtaaca tattttgttg
    11641 caagattaaa ccttgccgta cggttgcatt cttaacgctc acaataagct gattatcaac
    11701 taaattcact actcggtaaa gcccacgata agattctggc catcttttct gaattttttg
    11761 gtttaaatcg ttaatgaagt ttgctttttc gacaatacgg cttaagcttg agttctgtaa
    11821 aatgtcatta atctttttag gtgctgaatt tttcatctgt ttctttacat ttcgtcttat
    11881 tttaggcttg attttacgat acttgaccca ataatttact cattcggctt tactttagcg
    11941 tataattagc ccaatttttt catttatctt aatttaatga gcttattttt aaaacacttt
    12001 catcgaacgc ctttttggtc gcaactcttt ttgggaatgg ttgcgatact tgctttacct
    12061 gaaattcagg ttgcgtacgc caatgaaagt gaacaggaaa ccgttcttaa tcaatctttt
    12121 cttcaatatg ctcaatccgc taatgatatt gagcaacaat cgctttttat tgcagagtta
    12181 atccataaaa ttgtggaaat taaaccacaa gcggtgcatt tttgcgaatt ttttgcaaac
    12241 tcctaccgct tggatagaca aaatgcttac cccattcgag ccgggccaca aacctaaata
    12301 taatttaatt ttaccattaa ttgattaacc catttttata tttaggaata acacaatgat
    12361 ttcaaaatta ctgacttcta tttttggctc aagcaacgat cgcactttaa aacgtttaag
    12421 aaagcgagtg gcacaaatta ataagcttga accaaccttc gagcaattat ctgatgaggc
    12481 gttaaaggat aaaacagcgg agtttaagca acgccttgca gatggtgtat cgctagatag
    12541 cctattacct gaagcttttg cgacagtgag agaagcaagc aaacgagtat taggtatgcg
    12601 accatttgat gtacagctga tcggcggtat ggtgctaacg gggcgtaata ttgcagaaat
    12661 gcgtactggg gaaggtaaaa ccctaactgc aactttatct tgttatttga atgctttgac
    12721 cggtaaaggt gttcatgttg ttacggtgaa tgattacctc gcccgccgtg atgcggaaac
    12781 caaccgtccg ttatttgagt ttttaggctt aaccgttgga gtgaatattc cggggttacc
    12841 ttccgatgca aaacgtgctg cataccaagc agatattacc tattcgacta acagcgaatt
    12901 aggttttgat tacttgcgtg ataacttagc tcacgataaa aacgaacgtt tccaacgtga
    12961 gttacactac gcattagttg atgaagtaga ctctatttta attgatgaag ctcgtacgcc
    13021 gttaattatt tcagggcctg cggaagatgc gacccaaatt tatcaagcgg tagatcaaat
    13081 cattccgcat ttgattgctc aagataaaga agacagtgaa gagtacaccg gtgagggcga
    13141 ttttacctta gatctgaaaa acaaacaggc tcatttaacc gagcgtggta tggtgaaagt
    13201 agaggatttc ttaactcaaa tggggttaat ggaagagggc gaaagtttat atcaccctgc
    13261 tcgtatttcg ctgttacacc atgtgagtgc agcattgcgt gcccataaat tatttgaacg
    13321 caacgtagat tacattgtaa aagacggtga aattgtgatt attgatgagc acaccggtcg
    13381 tacaatggct ggacgtcgtt ggtctgacgg cttacaccaa gcgattgaag ctaaagagcg
    13441 tgtggctatt cagggcgaaa accaaactgt tgcctcaatt acttaccaaa actatttccg
    13501 tttgtacgaa aaattagccg gtatgactgg tacggcagac accgaagcct ttgaattcca
    13561 gcaaatttat ggcttaaata cggtggtgat tccaaccaac agaccggtga tccgtgatga
    13621 ccgtacagac ttaatgttta aaagcgaagc ggagaaattt gcggcgatta ttactgaaat
    13681 tagagactgt atcgagcgta aacagcctgt tttggttggc acagcatcgg tggaaaaatc
    13741 agagttatta tcggcagaat taaccaaagc cggtattgct cataacgtat taaatgcgaa
    13801 attccacgct caagaggctg aaattgtagc ggaagcggga gctccggggg cggttactat
    13861 cgcaaccaat atggctggtc gtggtacgga tattgtgctt ggcggtaact ggaaaatgga
    13921 agtagccaag cttgagaacc cgacacaaga acaaattgat gcgattaaag ctgcgtggca
    13981 agagcgttat gacatcgtaa tgcaagccgg tggtttacat attattggta cagaacgcca
    14041 cgaatcccgc cgtatcgaca accagttgcg aggtcgttct ggtcgtcaag gtgacccggg
    14101 gtcatcacgt ttctatctct ctttagatga tgccctaatg agaatttacc tcaatgaagg
    14161 taaattaaat atgatgcgta aagcctttac cgaagaaggt gaagcgatgg agtctaaact
    14221 gttaaccaaa gtgattgcct ctgcacaggc gaaagtagaa gcgcataact ttgatgggcg
    14281 taagcattta ttacaatatg atgatgttgc caatgaacag cgtaaagtaa tttacgaaca
    14341 acgcaatcat ctattagaaa cagataatat tgcctcaatg atcgaaagca ttcgccaaga
    14401 tgtatttgaa agcacgatta accaatatat tccgcctcaa tctatcgagg aaatgtggaa
    14461 tgtgccgggc ttagaagagc gtttacgccg tgaatttggg ttggatttac cgatttctca
    14521 ctggcttgaa actgaaaaag acttgcacga agagactttg cgtgaacgta tcttaaatat
    14581 tgcgattgca gagtacaatg cgaaggaaga aatagtaggc gcagaggtaa tgcgtaattt
    14641 tgaaaaaggt gtaatgctac aaaacttaga tgagctttgg aaagagcatc tagcctcaat
    14701 ggattattta cgcaaaggta ttcacttgcg tggttatgca caaaaagatc cgaagcaaga
    14761 gtataaaaag gaatcttttg cgatgtttac caatatgctt gataccttaa aattgaatgt
    14821 aattagcatt ttaagccgta ttcaagtgcg tagcaaagaa gaggtggaag aagcgcaacg
    14881 ccagcaagct gaaatggacg ctgcaagtac gccagttaca caagctaccg attctgctgc
    14941 tggtagtaga gaagaaaata gcgcagagag cttaagtgaa gaagagttgg caaacttaaa
    15001 tattggtcga aatgaccctt gcccttgtgg ttcgggcaaa aaatataagc attgccatgg
    15061 taacaaagcg agatattcgt aattaacaag cggtcatatt cagtcaggaa tttgcaaatt
    15121 ttctgcttaa tatgaccgct tgaatttata gaaagagtga aggaaactat gtcaaaaccg
    15181 attattcaag tctcagcagg gattattcgt aacgaatttg ggcaaattta cttaacccaa
    15241 cgtttagaag ggcaagattt tgctcagtct cttgaatttc ccggggggaa agtcgatccc
    15301 aatgaaaccc ctgaagaagc actaaaacga gaattagaag aagaaattgg tattcaagtg
    15361 ttaagcgctt ttccgtatga aaatttttgc tttgaatatc caacaaaaat cattgaattt
    15421 ttcttttatt tggtggaaga gtgggtaaat gaaccttacg gaagagaagg gcaagaaggt
    15481 ttttggatcg cacaatcgga tttagatgag ggagctttcc caccggcaaa tgcccaatta
    15541 attaaacgct taaaagaaca cgcataattt gtattgagaa ctgtatctaa agtaa
//
LOCUS       DANLXO010000066        15503 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.066, whole genome shotgun sequence.
ACCESSION   DANLXO010000066 DANLXO010000000
VERSION     DANLXO010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15503
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.066"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1436)
                     /gene="hrpA"
                     /locus_tag="PXD69_001710"
     CDS             complement(<1..1436)
                     /gene="hrpA"
                     /locus_tag="PXD69_001710"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDL6283892.1"
                     /translation="METPLQKNHKKPPLVKLENITTADFRRLLGRLKGAENIKNIDHK
                     RSVLAEISQDLTACQARFFARTQHAQNLKIDYPDLPVSARREEILKLISENQVVVIAG
                     ETGSGKTTQLPKMCLELGRGVKGLIGHTQPRRIAARSVATRIAEELKSELGETVGYKV
                     RFNDQVSENSLIKLMTDGILLAEIQHDSYLNQYDTLIIDEAHERSLNNDFILGYLKQI
                     LHKRPDLKVIITSATIDVERFSKHFNNAPIIEVSGRTFPVEVRYRPIVEDQDQLQGIL
                     NAVDELQAEGRGDILIFMNGEREIRDTAEALQKQELRHSEILPLYARLSAAEQQRIFQ
                     PSGGLNRIILATNVAETSLTIPNIKYVIDTGTARISRYSYRTKVQRLPIEPISQASAN
                     QRKGRCGRTSEGICIRLYSEEDFNSRPQFTDPEILRTNLAAVILQMTSLGLSDIANFP
                     FVDAPDSRQIQDGIRLLEELQAIIPNEK"
     gene            complement(1540..1992)
                     /locus_tag="PXD69_001711"
     CDS             complement(1540..1992)
                     /locus_tag="PXD69_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HDL6283893.1"
                     /translation="MTLQFNAVALLLVVLIILGLISQNSAVTISAAVLLIMQQTLLSK
                     FIPFVDQYGLKIGIIILTIGVLSPLVSGRITLPELAQLLNWKMALSIIAGVLVAWLGG
                     RGVNLMGSQPVLVTGLLIGTVIGVAFLKGVPVGPLIAAGILSLIVGKT"
     gene            complement(2055..2324)
                     /locus_tag="PXD69_001712"
     CDS             complement(2055..2324)
                     /locus_tag="PXD69_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283894.1"
                     /translation="MDAAMSLRFDKLRFVKRLQEANQTPEMAEAFANALDEALEQSQS
                     PLATKADLQLELEKLKNEINTTIFKAITLNITILGFLMAIMKFIN"
     gene            complement(2422..3018)
                     /gene="grpE"
                     /locus_tag="PXD69_001713"
     CDS             complement(2422..3018)
                     /gene="grpE"
                     /locus_tag="PXD69_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDL6283895.1"
                     /translation="MTTQNEHLQEEVKQEEIQPEVVTEETQAEEQNTPQEEPLALAQA
                     RIAELEAYIAEADKREQDIQLRAQAEIQNIRRRAEQDVEKAHKFALEKFSKELLTVVD
                     NLERGLDALDKAVTDETTQALVDGVEMTHKEFINTLAKFGVVAIGEVGEAFNPELHEA
                     ISMQPAEGIEANHVSTVLQKGYTLHGRVIRPAMVMVAN"
     gene            3240..4334
                     /locus_tag="PXD69_001714"
     CDS             3240..4334
                     /locus_tag="PXD69_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDL6283896.1"
                     /translation="MKKLAGLFAAGLATVALTACNEEKAAEPKATAAEAKPQATNQTV
                     HLYTWTEYVPEGLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDVIAPSNYF
                     VSKMAKEGMLAELDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYK
                     GETFTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEELKKL
                     RPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLA
                     IPANAKNKENAHKLINYLLSAKVAEKLTLAIGYPTSNVEALKVLPKEITEDTAIYPSA
                     EVLQKSQWQDDVGDAIELYEKYYQELKAAK"
     gene            4470..5861
                     /locus_tag="PXD69_001715"
     CDS             4470..5861
                     /locus_tag="PXD69_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDL6283897.1"
                     /translation="MNLRWQEYPENARKLFKLSLPIFISQLSASGMGLADIVMAGLVS
                     DDDVSAIAVSNSIYFPLFLFVSGLLNAITPTVSYLNGSSNRHLIANQVRQGYWIVFAM
                     SIPLMAIFLNSHLILDLMQTPAEFSIKSQQYLAVMAVGLIPALLAVSLRCMNDGLSNP
                     KPAMRITFFGLLLNIPLNYIFIFGKFGLPEMGAVGCGVATAIVNLIMFFMLLHYCYTN
                     SAQKDIRLFEKWIDAPSGQILLKLCKLGLPIAFAIFTEVMLFSTSSLFLSPLGSQVVA
                     SHQAALQTSSLFFMIPMSFGIATTIMIGQTLGQKNVEGAKILSYHALITATALAIIAA
                     IIIILLKNFIPFAFTNNPISIAITAHLLIFAAVYQIPDAIQAVANGILRGYKHTQPIL
                     YVTLFCYWGVSMPLGYILARTDWIVQPMAAQGFWLVFCIGLSLAGGLLLWQMRKIQAV
                     PKAQLIAKLERIK"
     gene            5920..9444
                     /gene="recB"
                     /locus_tag="PXD69_001716"
     CDS             5920..9444
                     /gene="recB"
                     /locus_tag="PXD69_001716"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HDL6283898.1"
                     /translation="MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNP
                     LTVEQILVVTFTKAATEELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQ
                     IYPLIPNIHEALLRLSIAEREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQS
                     DLLKKLSEEVWREQFYPQDLAITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQD
                     IAEHLAQYQQFINEVKSYWKTHSDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMN
                     QWANSQHNHFPAGLYLFTTEKIAAGTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSA
                     MLQYQFLIALKAKLAEYKQSHPQRSFDDLLTMLNQALKNLHTGEALSQKIRAMYPFAM
                     IDEFQDTDLTQYEIFSQIFMAENAENGFIMIGDPKQSIYKFRGADIFTYLRAAKQADE
                     QFTLGKNWRSLPEVVQAVNNLFSFANDNSPFLYEDIGFHPVEADSQKGQLVSEQGHFV
                     GYITENSKLDDLAEMCAYQIHQQLEAMAQGKFGVEKNGEFQSFAAKDIAILVRKGSQA
                     KRIKKALAKRNIKSVYLAESASVFGSEIATELCWLLQAALNPYHYKALLSALGSTLWG
                     LTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVLPMLHKIYLEQGIIERLKGLENA
                     DRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSPDFNDEQQLRLESEEELIKIV
                     TIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGALDWCLGSEEASFSLQYEAY
                     AEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIPTGKVPVSDYFSQKRIA
                     ANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTSLYAQHERFSEGKSE
                     RVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFFEHCQFNEQIDRE
                     AVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLNEWQFYLRLKN
                     DKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLIDYKSNFLG
                     YLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGVAYLFLR
                     AMNGENDNGVYFDKPTKQLIEEMDRLFG"
     gene            complement(9486..9968)
                     /gene="greB"
                     /locus_tag="PXD69_001717"
     CDS             complement(9486..9968)
                     /gene="greB"
                     /locus_tag="PXD69_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HDL6283899.1"
                     /translation="MAKSNYITRSGWQALDQELKFLWREERPKVTQAVSDAAALGDRS
                     ENAEYIYGKRRLREIDRRVRFLSKRLEVLQIVDYHPKQEGKVFFGAWVELENEEGEAK
                     QYRIVGCDEFDPAKNWISIDSPVARALIGKQVDDEIRVETPLGKVLLYINKIWYEQAS
                     "
     gene            complement(10019..11299)
                     /gene="pepB"
                     /locus_tag="PXD69_001718"
     CDS             complement(10019..11299)
                     /gene="pepB"
                     /locus_tag="PXD69_001718"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HDL6283900.1"
                     /translation="MTAMKISLSTQNAPEIWGKNAILSANDAGFTVHNPNNDLATIQK
                     AARKIKNQGISTVELTGDSWDLESCWAFHQGFHSVKNQGSVQYPDLDEQQAEFDNRVK
                     CATFVRELINKPSDKLTPEKLAEQAVEFIQKMAKPNTVSYQIIRGEALQEQGYHGIWT
                     VGKGSANPPAFLVLDFNPTNDENAQVLACLVGKGITFDTGGYSLKPSDSMSTMRTDMG
                     GAALLTGSLAFAIARGLNKRVKLYLCCAENMVSHNAFKLGDIITYRNGVTVEVLNTDA
                     EGRLVLADGLIDACKQNPQFIIDAATLTGAAKVAVGNDYHSVLSMDDNLTEALFKSAK
                     TENEPFWRLPFEEFHRGQIASSFADIANIGSVPVGAGASTATAFLSYFVENYQQNWLH
                     IDASATFRKTASDLWAAGATGLGIRTVANLLLSK"
     gene            complement(11438..12259)
                     /locus_tag="PXD69_001719"
     CDS             complement(11438..12259)
                     /locus_tag="PXD69_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDL6283901.1"
                     /translation="MKNIKLSAMSLTALFVLTACSHTHKNSDEHHQMVLQEQATLGIN
                     WMQQSGEYQALAHQAFNAAKVAFDQAKVKKGKKKAVVVDLDETMVDNSLYAGWQVKNH
                     KPFDGESWTRWVNARQTGAIAGAVEFNNYVNSHKGTMFYVSNRKDSSEKAGTIDDMNK
                     LGFSGVSEQTLLLKKDKSNKTPRFEEIEKQGYEIVLYIGDNLNDFGDATYRKSNAERR
                     AFVAENSQQFGKKFIMLPNPNYGDWEGGLDKDYYKGNAESRVKIRHNAIKAWDGK"
     gene            12407..13350
                     /locus_tag="PXD69_001720"
                     /pseudo
     CDS             12407..13350
                     /locus_tag="PXD69_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251085.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
     gene            complement(13463..14626)
                     /locus_tag="PXD69_001721"
     CDS             complement(13463..14626)
                     /locus_tag="PXD69_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL6283902.1"
                     /translation="MKRKTLATLVLIAALGIGGYFYYQQQTNKPQIHYITQAVTRAEI
                     NKNVLATGSVRANKRTEVGAQVSGKIQKLYVELGQSVKQGDLIADIDSSNQSNTLSTA
                     QARLSSYKAQLTSAQVALEVAQSNYNRLNKLYRANSASLNDLETAKNTLASAKATVDN
                     IKAQLKSAEISVNDAKTNLTYTQIISPMDGVIVSVPVSVGQTVNSNQTSPTIVQVADL
                     SKMLIKLEISEGDIAQVKVGQKVKFSTLAEPNREYSATIDSVDPALTTLTDNNYTEQS
                     GNTEAVYYYANVSVDNADNSLRIGMTTQAQITIDKREQVLVVPTSVIKKRGKENYVLV
                     LENEQSVERKIQIGISDTQNTEVLAGLNEGDQVIVTQRADDEKISTARGPRMF"
     gene            complement(14692..>15503)
                     /locus_tag="PXD69_001722"
     CDS             complement(14692..>15503)
                     /locus_tag="PXD69_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL6283903.1"
                     /translation="LPFRAIISDLDGTLLNANHKIGDFTIDTLEQLSKKGVDIFFATG
                     RNHPDVSQIIGKVNVKNAMLVTSNGARANNLEGKKILNHYLPEDLAFELMNIEFDDQN
                     VCLNSYQGDEWFINKEIAELKKFHQDSGFSYQVVNFAHHHGRNTEKVFFIGKTAEALV
                     PIEHYIRDTYGDRVQMTYSALLCLEVMAKGVCKANALAELVKLRGYTLADCIAFGDGM
                     NDVEMLSLAGKGCLMGNADPRLKAVLPNNEVIGFNKDEAVASYLRATFGIV"
BASE COUNT         4293 a         3135 c         3324 g         4751 t
ORIGIN      
        1 attttttcat ttggaataat cgcctgtaat tcttccaaca accgaatccc gtcctgaatt
       61 tgtcggctgt caggggcatc aacaaacggg aaattggcaa tatcactcaa tccaagcgaa
      121 gtcatttgta aaataaccgc tgcaaggtta gttcgtagaa tttcaggatc ggtaaattgt
      181 ggacggctgt tgaaatcctc ttctgaatag aggcggatac agatcccttc cgaggttcgc
      241 ccacaacgcc ctttccgctg gttggcggag gcttgcgaaa tcggctcaat cggcaagcgt
      301 tgcactttgg tgcggtagct ataacgagaa atacgagccg tgccggtgtc gatcacatat
      361 ttaatattcg gaatagtgag ggaggtttct gccacgttgg tcgccagaat aattcggttt
      421 agcccaccgc ttggctggaa aatccgttgt tgttcggcag ccgataagcg ggcgtaaagg
      481 ggtaaaattt cgctatgtcg cagttcctgc ttttgcaagg cttcggcagt gtcacgaatt
      541 tcccgttcac cgttcataaa aatcagaata tcgccacgcc cttcggcttg cagttcgtcc
      601 accgcattta gaataccttg cagttgatct tgatcttcca ctatcgggcg ataacgcact
      661 tccaccggga atgtccgacc agagacttca ataatcgggg cgttgttgaa atgtttggaa
      721 aaacgttcta catcaatagt tgccgaggtg atgatcactt tcagatcggg gcgtttgtgc
      781 agaatttgtt tcagataacc caaaataaaa tcgttgttca gcgaacgctc gtgagcttcg
      841 tcaataatca gcgtatcgta ctgatttaaa tagctgtcgt gctggatttc cgccagcaga
      901 ataccgtccg tcattagctt gattaagctg ttttcactga cttgatcgtt aaagcggact
      961 ttgtaaccga ccgtctcgcc cagttccgat ttcagctctt cggcaatgcg agtcgccacc
     1021 gaacgtgcgg caattcggcg gggctgggta tgcccaatca agcccttcac cccacgcccg
     1081 agttctaagc acattttcgg taactgggtg gttttgcccg aaccggtttc ccctgcgatc
     1141 accaccacct gattttcgct aatcagtttt aaaatttcct cacggcgagc ggaaacaggc
     1201 agatcagggt agtcaatttt caggttttgg gcgtgctgag ttcgtgcgaa aaaacgtgcc
     1261 tgacaagcgg tgagatcttg cgaaatttct gccaaaactg accgcttgtg atcgatgttt
     1321 ttaatatttt ccgccccttt taagcgaccg agcaggcggc ggaaatcggc ggtggtgata
     1381 ttttccagct tcacaagcgg tggtttctta tgattttttt gcaaaggtgt ttccatttaa
     1441 tttctctttt gcattaagac cttgtgattt attgtagggt gggcgtaagc ccacgtaaca
     1501 gaatagggat tttatgcgtg gacttacgtc caccctacat taggttttac caacaatcag
     1561 tgacaaaatc cctgccgcaa tcaacggccc gaccggtacg ccttttaaga acgccacgcc
     1621 gatcaccgtg ccgattaaaa gcccagttac caacaccggc tggctgccca ttaaattcac
     1681 gcccctgcca cctagccacg ctaccagcac gccagcaatt attgagagtg ccattttcca
     1741 gttcaatagt tgggcaagtt cgggaagcgt aattcgccct gaaaccaagg ggctaagtac
     1801 gccgatggtt aaaatgataa tcccgatttt taagccgtat tgatcgacaa aggggataaa
     1861 tttagaaagt aaggtttgtt gcataatcag caatacggcg gctgaaatag taaccgcact
     1921 gttttggctg atcagcccta aaataatcag caccacaagt agaagtgcca ctgcgttaaa
     1981 ttgtaaagtc ataggattaa aacgtaaaaa cccttacttc atagaagtaa gggagtggtt
     2041 aattaaacgt tgagctagtt aataaatttc attattgcca ttaaaaagcc aagaattgtg
     2101 atatttaagg taattgcttt aaatatcgtg gtattgattt cattttttag cttttcaagt
     2161 tcaagttgca aatcagcttt tgttgctagt gggctttgac tttgctctaa ggcttcatcg
     2221 agagcattag caaatgcctc agccatttca ggtgtttgat tggcttcttg caagcgtttt
     2281 acaaaacgta atttgtcaaa tcgtaggctc atagctgcat ccatttcaat tatcctcttg
     2341 tggttaagtt ataaactaat ttagcataat cacaagcagg aattttagga gattttgtga
     2401 tcttcgtcga aaatcgacaa tttagtttgc caccatcacc attgccgggc gaatcactcg
     2461 tccgtgaagc gtgtagcctt tttgtagcac tgtgctgaca tggttggctt caattccttc
     2521 ggcaggttgc attgaaatag cttcgtgcaa ttcagggtta aatgcctcgc ctacttcgcc
     2581 aattgccacc acaccaaatt tagccagtgt attgatgaat tctttatgag tcatttcaac
     2641 gccgtcaact aacgcttgag tggtttcatc ggtcacggct ttatcaaggg catctaatcc
     2701 acgttcaagg ttatcaacca ctgttaacaa ttctttggag aatttttcta aagcgaattt
     2761 gtgagctttt tcaacatctt gctctgcacg gcggcggata ttttgaattt ctgcttgagc
     2821 cctaagctga atatcttgct cacgtttgtc ggcttctgca atataggctt ctaactcggc
     2881 aattcgagct tgagcgagag ctaacggttc ttcttgaggt gtattttgtt cttccgcttg
     2941 agtttcttca gttacaactt caggttgaat ttcttcttgt tttacttctt cttgtaagtg
     3001 ttcattttga gtggtcattt tttatccttt aaaagactaa tctggaaatg taaatcttcc
     3061 ttaatatagc gataaattaa gggatttcaa gcatatctct ttctttttgc gaaaataatt
     3121 cactttttaa tcagaaaagg cttgcaaaat acgggggggg gcttaaaatg ccctagtctt
     3181 ttccgccctt aggcaaggct atatttttta atcacttttc tttaacggag aaaacttaaa
     3241 tgaaaaaatt agcgggttta tttgcagcag gtttagcaac agttgcatta acagcgtgta
     3301 atgaagaaaa agcggcagag ccaaaagcaa ctgcggctga agcaaaacct caagcaacaa
     3361 atcaaacagt tcacctttat acttggactg aatatgtgcc tgaaggtttg ttagatgaat
     3421 ttacgaaaga aaccggcatt aaagttgaag tttcaagtct tgaatctaac gaaacaatgt
     3481 acgctaaatt aaaattacaa ggcaaagatg gcggttatga tgtaattgct ccatcaaact
     3541 actttgtatc taaaatggcg aaagaaggaa tgttagcgga attagatcac gcacaacttc
     3601 cggttattaa agaattaaac caagattggt taaataaacc ttacgatcaa ggaaacaaat
     3661 attcattacc tcaattatta ggtgcgccgg gtattgcatt taatacggca gattacaaag
     3721 gtgaaacatt cacttcttgg ggtgatttgt ggaaacctga atttgcaggt aaagtacaat
     3781 tattagatga tgctcgtgaa gtattcaaca ttgcgttatt aaaattaggt aaaaacccaa
     3841 atacaactaa tccggatgaa atcaaagaag cctttgaaga gttgaaaaaa ttacgtccaa
     3901 atgtgctttc atttacctct gataacccgg caaactcatt tattgctggt gaggtttctg
     3961 taggtcagtt atggaacggt tctgtacgta ttgcgaagaa agaaaacgca ccggttgata
     4021 tggtattccc gaaagaaggt cctgtgcttt gggtcgatac tttagccatt ccggcaaatg
     4081 cgaaaaacaa agaaaatgca cataaattaa tcaactactt attaagtgca aaagtagctg
     4141 aaaaattaac gttagcgatt ggttacccaa cttcaaacgt agaagcatta aaagtattac
     4201 cgaaagaaat tactgaagat acagcaattt acccatctgc agaggtttta caaaaatctc
     4261 aatggcaaga tgatgttggt gatgcaattg agctttacga aaaatactac caagagttaa
     4321 aagcagcaaa ataatagctg attaattctg aagcctctag ggagcaatct ttagaggctt
     4381 tctcttttga gttgcaaaaa atttggcaaa aacgaccgct ttctaaggta caatcataaa
     4441 aacatactta gattttgaga gattaaacca tgaacttaag atggcaagaa tatcctgaaa
     4501 atgcccgcaa attatttaaa ctatccctac ccatttttat ttctcagctt tcagcttccg
     4561 gaatggggct ggcggatatt gtaatggctg gcttggtgag tgatgatgat gtctcggcga
     4621 ttgcggtaag taattcgatt tactttccgc tctttctgtt tgtgtcaggg ttgctgaatg
     4681 caattacccc aaccgtttct tacttaaacg gctcgagcaa tcgccattta attgctaacc
     4741 aagtaaggca gggctattgg attgtgtttg caatgtctat tccattaatg gcaattttcc
     4801 taaacagcca tctgatttta gacttaatgc aaacaccggc tgagttttca atcaaatcgc
     4861 aacaatattt agcagtaatg gcagttgggc ttattcctgc tttgctggcg gtgagtttac
     4921 gttgtatgaa cgatggatta tctaacccta aacctgcgat gcggattacc tttttcggtt
     4981 tattgctgaa cattccgcta aactatattt tcattttcgg caaatttggc ttgcctgaaa
     5041 tgggagcggt aggctgtggt gtagcaaccg caattgtgaa cttgattatg ttttttatgt
     5101 tgttgcatta ttgctacacc aattctgccc aaaaagatat tcgtttgttt gagaaatgga
     5161 ttgatgctcc aagcggtcaa attttgctaa aactttgcaa attagggctg ccgattgcct
     5221 ttgcgatttt taccgaagtg atgctgtttt cgacctcatc gctgtttctg tcaccacttg
     5281 gttcacaggt ggtggctagc caccaagctg cattgcaaac cagctcgcta ttttttatga
     5341 ttccgatgtc gtttggcatt gcaaccacca ttatgatcgg acaaacactt gggcagaaaa
     5401 atgtggaggg ggcgaaaatc ttaagttacc acgcactgat taccgcaacc gctttagcta
     5461 ttattgccgc catcattatt attttgttga aaaattttat cccttttgcg tttaccaaca
     5521 acccgatttc gattgcgatt accgctcatt tattgatttt tgcggcggtt tatcaaatac
     5581 cggatgccat tcaagcggta gcaaacggca ttctgcgtgg ttataaacat acccaaccga
     5641 ttttatacgt tactctgttt tgttattggg gggtgagtat gccgctgggc tacattttgg
     5701 caagaaccga ttggattgta caaccaatgg ctgctcaagg tttttggtta gtcttttgta
     5761 tcggcttaag tttggctggt ggcttgttat tatggcaaat gcgaaaaata caagcggtgc
     5821 caaaagcaca attaattgca aaattagaac ggattaaata acagattctc tgctatggaa
     5881 catagcagtg ctttttactt ttagaagata actttgctga tgaaaaacct aaatcctatc
     5941 caactacctt tgaataaatc cgttttaatc gaagcgtcgg caggtacagg gaaaaccttt
     6001 accattgcca acctgtattt gcgtttattg ctcggcattg gttgcaaccc gttaacggtg
     6061 gaacaaattt tggtggtgac atttaccaaa gcagcaaccg aagagttgaa aaaccgtatc
     6121 cgtaaaaata ttcagcaatg tgccgacttt ttaaaagatc aagctgatgg tttggaagtg
     6181 gaaagtacaa aatcctatcg aaacaacctt gattttttgg cacagattta tccgctcatt
     6241 ccgaatattc acgaagcatt gttacgttta agtattgccg aacgggaaat tgataccgcc
     6301 agcgtgttta ccattcacgg cttttgtcaa aaaatgctgg ttcagtttgc gtttgagtcg
     6361 ggcgtgcggt ttgacttgga tttacagcca aaccaaagtg atctacttaa aaaattaagt
     6421 gaagaagtct ggcgagagca attctatccg caagatttag ccatcactta tgcggttgcc
     6481 gaacaacttg gtacgccgga atatgccctc aatgcggtaa ggcgttattt atctactgaa
     6541 ttacctgaac caaatgcctc tttaaatcaa gatattgccg agcatttggc tcaatatcag
     6601 cagtttatta atgaggtgaa atcctattgg aaaacgcatt cagatgaact ggttgaaact
     6661 atccgccacg atttaaagca taaaattacg ctgcacggag gttggtatcg agcgaccact
     6721 tttgaagccg gtgtggaagt gatgaaccag tgggctaatt cgcaacataa ccatttcccg
     6781 gcagggcttt atttattcac tacagagaaa attgcggctg gcacgaaaaa gagctgtgag
     6841 ccgatagatt cccctcatct tgcaaaaaat caggcttttt tgaccgctta caaggaacgt
     6901 tttgaaaaca gcttgtcagc aatgttgcag tatcaatttt taattgctct caaagcaaaa
     6961 ttggcagagt acaaacaatc gcacccacaa cgcagttttg atgatttact cacaatgcta
     7021 aaccaagcgt tgaaaaatct acacacgggc gaagccttgt ctcagaaaat tcgggcgatg
     7081 tatccttttg cgatgatcga tgagttccaa gataccgatt taacccaata tgaaattttc
     7141 agccaaattt ttatggcaga gaatgcagag aacggcttta ttatgattgg cgacccgaaa
     7201 cagtcgatct ataaattccg tggggcggat attttcacgt atttgcgagc agcaaagcag
     7261 gctgatgaac aattcacatt gggcaaaaac tggcgttcgt tgcctgaagt ggtgcaagcg
     7321 gtcaataatt tgttttcttt tgcaaatgat aactctccgt ttctttatga ggatattggc
     7381 tttcacccag tggaggctga tagccaaaaa ggtcagttag ttagtgagca agggcatttt
     7441 gtaggctaca tcacggaaaa cagtaaatta gatgatttgg ctgaaatgtg tgcttatcaa
     7501 attcatcaac agcttgaggc gatggctcaa ggcaaattcg gagttgaaaa aaacggcgaa
     7561 tttcaatcct ttgctgcaaa agatattgcg attttagtcc gaaaaggttc acaagctaag
     7621 cgaatcaaaa aggcgttggc aaaacgtaat atcaaatccg tctatttagc tgaatcagct
     7681 tctgtatttg gttcggaaat tgcaacagaa ttgtgttggt tattgcaagc cgcactgaat
     7741 ccgtatcatt acaaggcatt attatcggcg ttaggctcaa ccttgtgggg cttaacggcg
     7801 gcagagatcc accgctataa ggaaaatgag caactttggg atctgaaagt caatcagttt
     7861 gtggaataca gcaacatttg gaaagagcag ggcgttctgc cgatgttgca taaaatctac
     7921 ttggagcagg gcattatcga acgtttgaaa ggtttggaaa atgcggatcg cttgattacg
     7981 gatttattgc atttaaccga aattttgcag gaaacctcgc aagcgttaga gtctgaagct
     8041 gaactgttgc ggtggtatga aaagcaagtt aattcgcccg attttaatga cgagcaacaa
     8101 cttcggttgg aaagtgaaga ggagctaatc aaaattgtga cgattcacgg ctcgaaaggc
     8161 ttgcaatatc caattgtttg gttacctttt gtttcacaaa aaagtgaggg agacacgcag
     8221 acagcattaa gtttatatcg caattctcaa ggtgcgctgg attggtgttt aggctcagaa
     8281 gaggcaagtt tttcgctaca gtatgaggct tatgcggaag atttacgttt gctgtatgtg
     8341 gcattaaccc gcgcggaatc tcagcttaac ttagtgttgc cgaaagagat ttccggctgg
     8401 tctccactcc attacttgtt agcagacggg gaaataccta caggaaaagt gcctgtttca
     8461 gattatttta gccaaaaacg gattgctgct aatttggttg aagtagccgg ggaattacct
     8521 ttctcactgt gggaaggaga acaatcttca gacgattacc aagcaaaaac ctttagtggc
     8581 aatatccgtg tggttggtca aattaccagc tttacttcac tttatgccca acacgagcgt
     8641 tttagtgaag ggaaatcaga aagggtaatg gatttagccc aagatcgaga tgtacatata
     8701 gaaaccattg aggcaggtta ttcaagtgaa actgccgctt tctcgccatt ccaattccca
     8761 cacggtatta aagtgggcac ggtgttacat cacttttttg agcattgcca atttaacgaa
     8821 caaattgata gagaggctgt tgctaaagta tgcgagcaat tagggctaag cgaggaatgg
     8881 attgaaccaa cagcattatg gtttgagcgt attctaacta cccctttggc agaggcaaat
     8941 ttctgcttaa aagcgattga tgaaaccaaa cgattaaacg agtggcaatt ctatttacgc
     9001 ttaaaaaatg ataaagcctt acatcaatta aatgcgttat taaagcaaca tagcccttta
     9061 gcaaaaactt tacctgaatt gcaattaccg caattagaag gttttgtgcg aggctttgta
     9121 gattgtatcg tgcaagtgga ggagaaattc tacttaattg attacaaatc gaatttctta
     9181 ggctatctgc cacaaaatta tgcgaaagaa cacattcaac gggaaatggg cagacaacgc
     9241 tatgatttgc aatatctgct ttacactctc gccttacacc gttatctaac tgcccgttta
     9301 ggtgaaaaat acgattatga acgagacttc ggcggagtgg cttacttgtt cttaagggca
     9361 atgaacggcg aaaatgataa cggcgtttat tttgacaagc cgactaagca gttgattgaa
     9421 gaaatggatc ggttgtttgg gtaaatatgt gtaggggcga aaatttttcg cccctttatg
     9481 ggtaattaac tcgcttgctc ataccaaatc ttattgatat aaagcaacac tttaccaagc
     9541 ggagtttcta ccctaatttc atcatcaacc tgtttgccga ttaaggctcg ggcgacaggg
     9601 gagtcaatcg aaatccagtt ttttgctggg tcgaactcat cgcaaccaac aatacggtac
     9661 tgttttgcct cgccctcttc attttctaat tccacccaag cgccgaaaaa gactttgcct
     9721 tcttgtttag ggtgataatc aacaatttgt agcacctcta gccgcttaga taaaaaacgc
     9781 acacggcggt cgatttctct caaacggcgt ttgccgtaaa tatattcggc attttcgctt
     9841 cgatcaccca atgcggcagc atcagacacc gcttgagtca ctttcgggcg ttcttcccgc
     9901 catagaaatt ttaattcctg atctaaggct tgccagcctg aacgggtaat gtaatttgat
     9961 ttagccatag ttatttaatt gtttatggag caaatagtga tttgccccta cgaagtttct
    10021 attttgaaag caataaattc gctactgttc ttattcccag tccggttgct cctgccgccc
    10081 ataaatcgct cgccgttttg cggaatgtgg cagaggcgtc aatatgtagc cagttttgct
    10141 ggtagttttc tacaaagtaa gataaaaatg cggtggcggt acttgcccca gcccccaccg
    10201 gcacagagcc gatattggcg atgtctgcaa aggaagaagc aatttgccca cggtgaaatt
    10261 cttcaaacgg taaacgccag aacggttcat tttccgtttt ggcagactta aatagtgctt
    10321 cggttaggtt gtcgtccatt gaaagcaccg agtggtagtc attgccgact gcgacttttg
    10381 ctgctcctgt gagggttgca gcatcaataa taaattgtgg attttgcttg cacgcatcaa
    10441 ttaaaccatc ggcaagcact aaacgccctt cagcatcggt gtttaaaact tcaacagtta
    10501 cgccattgcg gtaagtgata atatcgccta atttgaacgc attgtggctg accatatttt
    10561 ccgcacagca gaggtagagt ttcactcgtt tattcaagcc tcgagcaatg gcaaaagcaa
    10621 gtgagccggt taaaagtgcc gctccgccca tatcggttcg cattgtgctc atactatcgc
    10681 ttggttttag actataaccg ccggtgtcaa aggtaatgcc tttgccgacc aagcaagcca
    10741 gtacctgtgc gttttcatcg ttggttgggt tgaagtctaa tactaagaat gcaggcggat
    10801 tggcagagcc ttttccaact gtccaaatgc cgtgatagcc ttgttcttgt aatgcttcgc
    10861 cacgaatgat ctggtaagaa accgtattcg gttttgccat tttttggata aactcgaccg
    10921 cttgttcggc taatttttca ggggttaatt tatctgatgg cttattaatt aattcacgca
    10981 cgaaagtggc acattttaca cggttatcaa attcggcttg ctgttcgtct aagtctgggt
    11041 attgtaccga gccttgattt tttaccgaat gaaatccttg atgaaacgcc cagcaggatt
    11101 ctaaatccca actatcgccg gtcagctcca cggttgaaat accttgattt ttaattttgc
    11161 gggcggcttt ttgaatagtg gctaaatcgt tgttcggatt atgtacggta aaccccgcat
    11221 catttgcgga aagaatagca tttttacccc aaatttcagg ggcgttttga gtagaaagtg
    11281 aaattttcat tgctgtcatt atcggtttcc ttagaaaatg gattttgctt tatcctaaca
    11341 aacttttgca aagttttata caaaaatgac cgcttgcaga gcatagcctt gacaagcggt
    11401 cattgtttcg tgtttttaca acctgattaa ggacggatta tttgccgtcc caagctttaa
    11461 ttgcattgtg gcggatttta acacggcttt cagcattgcc tttgtagtaa tctttatcta
    11521 aaccgccttc ccagtcgcca tagttcgggt tcggtaacat aatgaatttt ttaccgaatt
    11581 gttggctgtt ttcggctacg aatgcacggc gttccgcgtt tgatttacgg taagtcgcat
    11641 cgccgaaatc gtttaagttg tcgccaatat agagcacgat ttcatagcct tgtttttcga
    11701 tttcttcaaa gcgaggggtt ttgttcgatt tgtctttttt caacaagagt gtttgttcgc
    11761 tcacaccact aaagcctaat ttgttcatat catcaatagt accggctttt tcactgctgt
    11821 ctttacggtt tgaaacatag aacatagttc ctttgtggct attaacgtag ttgttaaatt
    11881 ccactgcacc ggcaatcgct ccggtttggc gggcatttac ccaacgagtc cagctttcac
    11941 catcaaacgg cttgtggttt ttaacctgcc agccggcata aaggctgttg tccaccatag
    12001 tttcatctaa atctactacc acggcttttt tcttgccttt tttcactttg gcttggtcga
    12061 atgccacttt cgctgcattg aatgcttgat gggcaagagc ttggtattcg ccggattgtt
    12121 gcatccagtt tatccctaat gtagcttgct cttgcaacac catttgatga tgctcatcgc
    12181 tgtttttatg cgtgtgcgaa caagcagtta atacaaataa agctgtgagg ctcatagcag
    12241 aaagtttgat gtttttcata cgtatatcct tagttttatt gttgataaac agagcgatta
    12301 tacctaaaaa gagttgctta tggctaatag tttattgctc ctattcactt ttaaagcaaa
    12361 ctaaggtagc ctagtaacct ttttataaca attacacaga ggctatatgc aaacattatt
    12421 aaaatttaca caatttatca gcaaaacctt cgccatttgg gtggtgtttt ttgcttttat
    12481 cgcagcacaa tttccggaaa cctttaagca attcctgcct tggattcctt atctgttagg
    12541 gattgtgatg ttgggaatgg ggttaacctt aactttcaaa gattttgccg aggtaacgaa
    12601 aaatccgaaa tcagtgatta tcggcgtgat cgctcaattc gtggtatgcc gagtgtagct
    12661 tatggattgg caaaagcatt taacttaccc gcagatttag ccattggtgt gattttagtt
    12721 ggttgttgcc cgggcggtac ttcttcaaac gtgatgacct atttggctcg tggcaacaca
    12781 gcgttatcgg tagcttgtac cactatttca actttacttg ccccagtgct cacgccggca
    12841 attttctatt tatttgccag ccaatggtta gaaattaatg caacggcaat gtttatttcg
    12901 gtgttgcaaa tggtgctatt gccaattttt gtgggcgtgg tgattcgtac tattttcaaa
    12961 caaaaagtag agcaatttag ccaaacaatg ccattaattt cagtgattgc aatcgtatta
    13021 attgtcacgg cggtggtgtc agttagccga gatcgtatta ttgaatccgg tttattaatt
    13081 tttgcggtag tagcattaca caacggttta ggttatttaa tcggttattt ggcgagccgt
    13141 ttattaaaat taccgattgc agacagcaaa gcggtggcga ttgaagtggg gatgcaaaac
    13201 tcaggattgg gggcagcact tgccgcatta cactttaaag ccaaccctat cattgcggtg
    13261 ccaagtgcgg tatttagctt ctggcacaat atttcaggcc cgattttggc gatgattttc
    13321 gctaaaatga aaaacgataa cgaaaaataa aattcgtttt aatacagacg ttttaatgtt
    13381 ttaataaaga atagacaaac ggttaaattt ttctaatttt ttgcaaaatg ttcagaaaat
    13441 ttaaccgctt gttgtttaga atttagaaca ttcttggtcc acgtgcagtg ctgatttttt
    13501 catcatccgc tctttgggta acaatcactt gatcaccctc atttaagcct gctaatactt
    13561 cggtattttg cgtatccgaa atgccaattt ggatttttct ttcaaccgac tgctcatttt
    13621 ccagcaccaa cacataattc tctttaccac gttttttgat tacgctggtg ggtacaacta
    13681 aaacctgttc ccgtttatca atagtaattt gggcttgagt agtcattccg atgcgtaaac
    13741 tgttatcggc attatcaacg gaaacattag cgtagtaata aaccgcttcg gtattacccg
    13801 attgttcggt gtagttatta tcggtcagcg tggtgagtgc cggatcaact gaatcaatgg
    13861 tagcactata ttctcgattt ggctcagcaa gggtggaaaa cttaactttt tgcccgactt
    13921 taacctgtgc aatatcgccc tccgaaattt caagtttaat cagcatctta gataaatctg
    13981 ctacctgtac aatagttggc gaagtttgat tggaattgac cgtttgcccg acagaaaccg
    14041 gtacagacac aatcacgccg tccattggcg agataatttg cgtataagtt aagttggttt
    14101 tagcatcgtt taccgaaatt tcagccgatt ttaattgtgc tttaatgtta tccaccgtgg
    14161 ctttggctga agctaaggta tttttagccg tttcaagatc gtttaaagag gcactatttg
    14221 cccgatagag tttatttaag cggttgtagt tcgattgagc tacttcaagt gcaacctgtg
    14281 cagaggtgag ctgtgcttta taagaagaaa gccgggcttg agcggtgctt aaggtgttgc
    14341 tctggttgct ggaatcaata tctgcaatta aatctccttg cttcaccgat tgcccgagct
    14401 cgacatagag tttttggatt ttgcccgaaa cttgagcccc cacttcggtg cgtttattcg
    14461 ctcgaaccga accggttgcc agcacatttt tgttaatttc tgcccgtgtg acagcttggg
    14521 taatgtaatg gatttgcggt ttattggttt gttgctgata ataaaaatag ccgcctattc
    14581 cgagagcggc aattagcaca agagtggcta atgttttacg tttcatactg ttccttgatg
    14641 atatacaagc ggtcaaattt agacaaaaat ttgcaaaaaa gttgctctca actaaacaat
    14701 gccaaatgtg gctcgaagat agcttgccac cgcttcatct ttgttaaagc caatcacttc
    14761 attattcggt aatacggctt ttaaacgtgg atcggcatta cccattaaac aacctttgcc
    14821 ggctaaactt agcatttcca catcattcat accgtcacca aaagcgatac aatcggctaa
    14881 ggtgtagccc cgtaatttga ccaattcggc gagagcattg gctttacaca ctccttttgc
    14941 catcacttca aggcaaagta gggcagagta ggtcatttgc acacggtcgc cataggtatc
    15001 ccgaatataa tgttcaatcg gtactaaagc ttcagcagtt ttgccgataa aaaacacttt
    15061 ctcggtattt cgaccgtgat gatgagcaaa atttactact tgatagctaa atcctgaatc
    15121 ttgatggaat ttttttaact ctgcaatctc tttattgata aaccattcat cgccttgata
    15181 gctgtttaag cacacatttt ggtcgtcaaa ttcaatgttc attaattcaa aggcaagatc
    15241 ttccggtaaa taatggttga gaattttttt accctctaaa ttgttggctc ttgccccgtt
    15301 tgaagtgact aacattgcat ttttaacgtt tactttccca ataatctgag acacatctgg
    15361 atgattgcga ccggtggcga aaaaaatatc aacacctttt tttgatagtt gttctaatgt
    15421 atcaatagtg aaatcaccaa ttttatgatt ggcatttaat agtgtgccat caagatcgga
    15481 aataattgca cgaaatggga gag
//
LOCUS       DANLXO010000067        14823 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.067, whole genome shotgun sequence.
ACCESSION   DANLXO010000067 DANLXO010000000
VERSION     DANLXO010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14823
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.067"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(91..579)
                     /gene="sixA"
                     /locus_tag="PXD69_001723"
     CDS             complement(91..579)
                     /gene="sixA"
                     /locus_tag="PXD69_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HDL6283904.1"
                     /translation="MNIWIMRHGEAGFNASSDAARCLTDNGIKNTISQGKWLGEHLAN
                     QQIQLDKILVSPYLRAQQTLENVLIGMQAVNFPQHFTNLIESWDEVTPDGNPHTVESY
                     LHFLREEGAKNILLISHLPLVFDLVQILTNNQSNVQFPTSTIAEINWVKTKAELIRVK
                     HT"
     gene            706..2145
                     /gene="pyk"
                     /locus_tag="PXD69_001724"
     CDS             706..2145
                     /gene="pyk"
                     /locus_tag="PXD69_001724"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL6283905.1"
                     /translation="MSRKLRRTKIVCTMGPATDRGNTLEKIIAAGANMVRMNFSHGIP
                     EDHIERANKVREIAARLGRHVAILGDLQGPKIRVSTFKDGKIFLNIGDKFTLDADLPR
                     GEGHQEAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLEVEGVKVHTEVTVGGPLSNNK
                     GINKLGGGLSAPALTDKDKEDIKLAAKIGVDYLAVSFPQSSADLHYARELAKEAGLEA
                     KIVAKVERAETVATEEAMDDIILGADVVMVARGDLGVEIGDAALVGVQKRLIRRARKL
                     NRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGETANGDYPVETVKSM
                     AEVCLGAETMPSINISRHRMEGTFKSIEEAVAMSAMYTANHLEGVSAIISLTHSGETA
                     KLTSRISSGLPIYAMSRNQKALNLCALYRGVTPVYYNEDSRTMEGAKKAIAQLKEQGY
                     LLTGELVLLTHGDELKAGGTNTCRILRVE"
     gene            2241..3278
                     /locus_tag="PXD69_001725"
     CDS             2241..3278
                     /locus_tag="PXD69_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL6283906.1"
                     /translation="MHNKLLSICILRLSAIGDVCHTLAVIQAIQRKYPSAEITWIIGK
                     TEAYLMKDIPNVHLIPYDKKIGWKGIFTLWQKLSHKRFDFLLNLQTAFRASILSLGIK
                     AKKKIGFNQDRAREMQWLFTNQKVEMTDSPHVLDGQMMFAKAIGIMDLSAQWNLPVSD
                     EDLAYGKQFIDFTRKNILIAPCSSKKEKDWLPERYAEIANWLSKQNINVLIAGSPSQY
                     EMETAAKIQQLAPNCTSIAGKTTLKQLAGVIRQVDLVISSDSGPAHIATTQNTPVIGL
                     YAIHNPRRTGPYNDLDKVVSVYDEAILQSYGKPWQQLAWATKAKGKNWMEKITVESVK
                     QKVVETLKITL"
     gene            3318..4376
                     /locus_tag="PXD69_001726"
     CDS             3318..4376
                     /locus_tag="PXD69_001726"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HDL6283907.1"
                     /translation="MNTVFNQDSVHNVNIQDEKVLLTPQELKQEFPLPEHLRNQIERS
                     RKTISDIIHRRDKRQLIVIGPCSIHDPVAALEYGKKLKALSEQVSDKLYIVMRVYFEK
                     PRTTVGWKGLINDPKMDGSFDVETGLRIARKLCLDLAELGLPLATEALDPMTPQYLAD
                     LFSWSAIGARTTESQTHRELASGLSMAVGFKNGTDGDLAVALNAMQSSAQSHSFIGIN
                     QQGQVTLLKTKGNADGHIILRGGKTPNYEKQYVDDCEWVLKQANLPTAIMIDCSHGNS
                     NKDYRRQPLVAENVLEQLLAGNTSIIGLMIESNLHAGNQSSELPFEQMKYGVSITDAC
                     IDWQTTEELLTHFAEKLR"
     gene            4431..5552
                     /gene="tyrA"
                     /locus_tag="PXD69_001727"
     CDS             4431..5552
                     /gene="tyrA"
                     /locus_tag="PXD69_001727"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HDL6283908.1"
                     /translation="MNPLAPLREQIDQVDQQLIALLSERLALVAEVGKVKSEHGIPVY
                     APERETAMISARRSEAEKQGIPADLIEDVLRRIMRESYANENKHGFKRVNSDIQKIVI
                     VGGKGKLGGLFGNYLTLSGYNVEALGRDDWDNAEQILANADVVIVCVPIANTLATIER
                     LQSYLTENMILADLTSVKHQPLQKMLEVHNGAVVGLHPMFGPDIASQAKQVVACCHGR
                     FPERYQWLLEQIKIWGAKIEEIEAAAHDNAMTYIQALRHFSTFAFGLHLSRQPVQLSQ
                     LLALSSPIYRLELAMIGRLFAQDGSLYADIIADKPENLATIETLKESFEQGLDFFKRN
                     DKAGFIKAFEEVHHWFGDYSEQFLKESRVLLQQAHDSRK"
     gene            complement(5743..6828)
                     /gene="recF"
                     /locus_tag="PXD69_001728"
     CDS             complement(5743..6828)
                     /gene="recF"
                     /locus_tag="PXD69_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDL6283909.1"
                     /translation="MALTRLLINHFRNIQHTDLAFSPHFNFLVGANGSGKTSLLESIF
                     YLGHGRSFKSHISNRIIHYDKDDFVLHGKIDEAKHSWSVGIQKFRSGETTLKINGEDG
                     NKIADLAHLLPMQVITPEGLTLLNGGPSFRRAFLDWGLFHQHPDFYAHWNNLRRLLKQ
                     RNSALQQVRSYQELKAWDIELVKTTYAVSEMRAEYAEALRPEIEKTCQFFLPEIEIGL
                     SFHQGWEKGADYAEILAQGFERDKALGYTMIGAQKADFRFKANGLPVEDVLSRGQLKL
                     LMCALRLAQGEHLVAQKQRQCLFLIDDFASELDPTKRELLAHRLRESGSQVFVTAITQ
                     DQLNQMQWQDRSDDCLFTVKNGEIQPQ"
     gene            6968..7297
                     /locus_tag="PXD69_001729"
     CDS             6968..7297
                     /locus_tag="PXD69_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDL6283910.1"
                     /translation="MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLP
                     PGMKFPF"
     gene            7305..7910
                     /gene="recR"
                     /locus_tag="PXD69_001730"
     CDS             7305..7910
                     /gene="recR"
                     /locus_tag="PXD69_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDL6283911.1"
                     /translation="MQTSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALS
                     KALNEAMSHIGHCKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFS
                     GRYFVLMGHLSPIDGIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEM
                     CRMYNVKATRIAHGVPVGGSLEMVDGTTLSHSFAGRRDIDI"
     gene            7982..8308
                     /gene="grxD"
                     /locus_tag="PXD69_001731"
     CDS             7982..8308
                     /gene="grxD"
                     /locus_tag="PXD69_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005705415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HDL6283912.1"
                     /translation="METIDKIKQQISENPILLYMKGSPKFPSCGFSARAVEAVINCQV
                     PFGYVDILTNPDIRAELPKFANWPTFPQLWVEGELVGGCDIVLEMLQKGELQTLLKET
                     AAKHAA"
     gene            8450..9487
                     /locus_tag="PXD69_001732"
     CDS             8450..9487
                     /locus_tag="PXD69_001732"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDL6283913.1"
                     /translation="MALKELDWANLGFSYIKTDYRFIAHWKDGKWNEGELTQDNTLHI
                     HEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNAERMQRTADRLLMPRVPTELFIR
                     ACKKVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKAAPEFIFSVFCCPVGAYFKG
                     GLAPSNFITTDYDRAAPMGTGGVKVGGNYAASLLPHELAVEQSSTTRKFADAIYLDPK
                     THTKIEEVGAANFFGITKDNKFITPISESILPSITKYSLLHLAQERLGMEAIEGDVYI
                     DQLDQFAEAGACGTAAVITPVGGIQHKDKFHVFYSETEVGPVTRRLYAELTGIQFGDV
                     EAPQGWIVKVE"
     gene            9514..10062
                     /locus_tag="PXD69_001733"
     CDS             9514..10062
                     /locus_tag="PXD69_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HDL6283914.1"
                     /translation="MAKLFANSTACLYLENMKKLIFLGLSALALAGCSSTISNPNQLI
                     GQWQCTIEYDDFNIRTVDNLRFSTNGTMTNQGGIYYPIQKSIFEYSLQQNGRWSVKNG
                     AIVYRIVSESVQRSHRSQIWSELQRDAELQQFEENLFSSLSDSDNNKTVELIITDFDE
                     KEMDIKQEIKGHKAYKGQCIKQ"
     gene            10071..10415
                     /locus_tag="PXD69_001734"
     CDS             10071..10415
                     /locus_tag="PXD69_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL6283915.1"
                     /translation="MIQRFEVGSRFSEMAIHNGVAYLAGQVPLDDTADAYTQTQQVLA
                     EIDKWLAKANSDKSKILMATVYLKEMADYAEMNRAWDEWVAPNNAPPRAAVEAKLANP
                     NWKVEIVVTAAV"
     gene            complement(10448..12226)
                     /locus_tag="PXD69_001735"
     CDS             complement(10448..12226)
                     /locus_tag="PXD69_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HDL6283916.1"
                     /translation="MSTLDFHFIHRFHQQVQALSHHPALRFMQDEKWSEISWLELQKQ
                     VNNLSYALLANGLAVQEKIAIFAQNMPRWTITDIAAMQIRAVAVPIYATSTTKQLEYI
                     LNDGDIKILFVGDQEQYDQAIEIANNCSLLIKIVAMKDSIDLRDFPIAQHWQDFIKVN
                     QDEAELTKRLNDKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLQAHNKALPHIDEN
                     DISLSFLPLSHIFERAWVTYVLYRGAVNCYLEDPQQVRQALSTVRPTLMCAVPRFYEK
                     IYTAVWDKVQQAPIHRRALFKWAIRTAEDNLFGKKSAFFHRLQYIMADKLVLGKLRAL
                     LGGRIRMMPCGGAKLDPSIGLFFQSIGINVKLGYGMTETTATISCWQEKGFNINSTGT
                     LMPDVEVKISEENEILVRGGLVMKGYYKKPEATAQAFTAEGFLKTGDAGELDSEGNLY
                     ITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEE
                     YAKKLNIRYQDRLELIKHYEVVRMFEQRINELQKDLASFEQIKKFTLLSQAFSTKMEE
                     ITPTLKLRRKVILERYKQQIEKMYES"
     gene            complement(12452..13021)
                     /locus_tag="PXD69_001736"
     CDS             complement(12452..13021)
                     /locus_tag="PXD69_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HDL6283917.1"
                     /translation="MNQENHKIEDIIRIFNQCFSDEYNTRLERGGNYPIYLPEFMDED
                     GVPSERPYNVILFAHGYYSSALHEIAHWLVAGEARRKLEDFGYWYEPDGRSAERQREF
                     ESAEIKPQAIEWVLATAAGFRYFASADNLSGNPGDNSAFKQAVYDQVKLYAERGYLPK
                     RAETLRKALCAFYGTPDVIDLAQFDIERI"
     gene            complement(13031..14794)
                     /locus_tag="PXD69_001737"
     CDS             complement(13031..14794)
                     /locus_tag="PXD69_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDL6283918.1"
                     /translation="MIRYFFSLVLSLLMINSSHANLFSQPKFLKSEEAFVFSIQNENE
                     TLQLNWDIADNYYLYKKEIRVTPQNIEIGDITFPAAEQYNDEFFGQVEIYRNHLGLKV
                     PFKEIKDNASIVVEYQGCTKGFCYPPERVELKLDSILSATPEELAQLEAQAVEKSENF
                     AKTDNMAPPENVAKAEQDQLAENLANNRFSIFWFFVLGVGLAFTPCVLPMLPLLSAIV
                     IGNKQRPSTAKALLLSIAYVQGMAVTYTLLGLIVAAIGLPFQIALQSPPVLIGLSIVF
                     ILLACSMFGLYEIQLPNSWQQKLNAMSQKQQGGALGSVFLMGMIAGLIASPCTSAPLS
                     GALLYVAQSGDLVTGGLALYLLALGMGLPLILITLFGNKILPKSGEWLLKVKAAFGFV
                     MLALPVFLLSRVLPSHYEPFLWSALAVAFLIWLVDAIPSNSITKKIIKVLLLLALAIA
                     AKPWADLAWNGSTTQQQTTPHLALEKIQSLADLETKLTASKGKKVMLDLYADWCVACK
                     EFEKYTFSDQNVQNKLNEMVVLQIDMTKNSAENIELMKHFNVLGLPTILFFDENGNEM
                     SQSRVTGFLDAEQFLAWLNKL"
BASE COUNT         4463 a         2853 c         3205 g         4302 t
ORIGIN      
        1 cgcatttttt aggtattttg gaagtctata aattcgacaa tttataaaaa aattgaaaat
       61 ttttatattg acattctaaa aatgaaagaa ttaagtatgc tttactcgaa ttagctcagc
      121 ttttgtcttt acccaattaa tttctgctat ggttgaagtt ggaaattgta cattgctttg
      181 gttattcgtt aaaatttgga cgagatcgaa cacaagtggg agatgtgaaa tcagaagaat
      241 attttttgcg ccttcctctc ttaaaaaatg tagatagctt tctactgtat gcgggtttcc
      301 gtcaggcgta acctcgtccc aactttcaat gaggttggta aaatgttggg gaaaattgac
      361 cgcttgcata ccaataagca cattttcaag cgtttgttgc gccctaaggt atgggctgac
      421 gagaatttta tctaattgaa tttgttggtt ggctaaatgt tctcctaacc attttccctg
      481 tgaaatggtg ttttttatac cattgtcggt taaacagcga gcagcatcac tcgaagcatt
      541 aaagcctgct tccccatggc gcataatcca aatattcata acattctcct ttagttgtat
      601 ttaaactctc ttgatttagg cgtataatga ccctcgttta acgcataatc aagatgctta
      661 gaaagatttt aacttaattt ttaaatttat tgatggagtc aaataatgtc tagaaaactc
      721 agaagaacga agatcgtttg tacaatggga cctgcaacag atcgtggcaa tacgttggaa
      781 aaaatcattg ctgccggtgc aaatatggtt cgtatgaatt tctctcacgg tattcctgaa
      841 gatcacatcg aacgtgcgaa taaagtgcgt gaaattgctg caagattagg tcgccacgtt
      901 gcgattttag gcgatttgca aggtcctaaa attcgtgttt cgacatttaa agacggtaaa
      961 attttcttaa atattggtga taaattcacc ttagacgcag atttaccgcg tggagaaggc
     1021 catcaagaag ctgtaggttt agattacaaa aacttaccaa atgatgtagt acctggtgat
     1081 attctattgt tagatgacgg taatgttcaa ctgaaagtgt tggaagtgga aggcgttaaa
     1141 gttcatactg aagtgacagt tggtggcccg ttatcaaaca ataaagggat taacaaatta
     1201 ggtggtggtt tatcagctcc tgcattaacc gacaaagata aagaagacat taaattagcg
     1261 gcgaaaatcg gtgtggatta cctagcggtt tcattccctc aatcaagtgc agatttacat
     1321 tatgcacgtg aattagcaaa agaagcaggc ttagaagcga aaattgtagc gaaggttgaa
     1381 cgtgccgaaa ctgttgcgac tgaagaagca atggacgaca tcattttagg tgcggacgtt
     1441 gtgatggttg ctcgtggtga cttaggggtt gaaattggtg atgcggcttt agtgggtgtg
     1501 caaaaacgtt taatccgccg tgctcgtaag ctaaatcgtg tggtaattac cgcaacccaa
     1561 atgatggaat cgatgattaa aaaaccaatg ccgacccgtg ctgaagtgat ggatgttgca
     1621 aatgctgtgt tagatggtac tgatgcggta atgctttccg gcgaaactgc aaacggtgac
     1681 taccctgttg aaacggtaaa atcaatggca gaagtgtgct taggtgctga aacaatgcca
     1741 agcattaaca tttctcgcca ccgtatggaa ggtacgttta aatctatcga agaagctgtg
     1801 gcaatgtctg caatgtacac cgcaaaccat ttagaaggtg tatcggcaat tatttcatta
     1861 actcattcag gcgaaacggc taaattaacc agccgtatca gctcaggttt accgatttat
     1921 gcgatgtctc gtaaccaaaa agcattaaac ctttgtgcgt tatatcgtgg tgtaacaccg
     1981 gtatattaca atgaagacag ccgcacaatg gaaggggcga aaaaagccat tgctcaatta
     2041 aaagaacaag gctatttatt aaccggcgaa ttagtgcttt taactcacgg agatgaatta
     2101 aaagctggcg gtacaaatac ttgtcgtatc ttaagagttg aataatctaa acgattaacg
     2161 caaaagccac ataaaacact ttatgtggct ttttttctgt cttaatatag cttaatgtaa
     2221 tctgaactat tgatattatt atgcacaata aacttctttc tatctgtatt ctccgccttt
     2281 ctgccattgg cgacgtttgc cataccttag cggttattca agctattcaa cgaaaatatc
     2341 ctagtgctga aattacttgg attatcggca aaacggaagc gtatttaatg aaagatattc
     2401 cgaatgttca cttaattcct tatgataaaa aaatagggtg gaaaggtatc tttacacttt
     2461 ggcaaaaact ttctcacaag cggtttgatt ttttattaaa tttacaaacg gcattccgag
     2521 cttcaattct atcgcttggg attaaagcaa agaaaaaaat cggctttaat caagacagag
     2581 caagggaaat gcaatggttg tttaccaacc agaaagtaga aatgacagac tctcctcacg
     2641 tgcttgacgg gcaaatgatg tttgccaaag ccattgggat aatggattta tcggcacaat
     2701 ggaatttacc tgtgagtgat gaagatttag cttatggcaa acaatttatt gattttacaa
     2761 ggaaaaatat actcattgct ccttgttcaa gcaagaaaga gaaagattgg ttgccggaac
     2821 gctatgcaga aattgctaac tggctaagta agcaaaatat caatgtatta attgcaggtt
     2881 ctccatcgca atatgaaatg gaaaccgcag ccaaaattca acaacttgcc ccgaattgta
     2941 cgagtattgc cggtaaaacc acgctaaaac agcttgcagg tgttattcgt caggttgatt
     3001 tggtgatctc ttcagattca ggtcctgccc atatcgccac tacgcaaaat acgccggtga
     3061 ttgggttgta tgcgattcat aatccaagac ggacaggccc ttacaatgac ttagacaaag
     3121 tggtttcggt atatgatgaa gcgattttgc aatcttatgg taaaccttgg cagcaattag
     3181 cttgggcaac taaagctaaa ggcaaaaatt ggatggaaaa aatcacggtg gagagtgtga
     3241 aacaaaaagt agttgaaact ttaaaaatta cgttgtaaag tttgtgtatt aaaagattta
     3301 cacaaaagga aattaaaatg aacacagtgt ttaatcaaga tagcgtgcat aacgtaaata
     3361 tccaagatga aaaggtatta ctgaccccac aagagttaaa acaagaattt ccgttgccgg
     3421 aacatttacg caatcaaatt gaacgttcac gcaaaacgat ttccgatatt attcacagac
     3481 gagataaacg ccaactgatt gtgattggac cttgttcgat tcacgaccca gttgctgccc
     3541 ttgaatatgg taaaaaatta aaagctcttt cggagcaagt gagtgataag ttgtatattg
     3601 tgatgcgggt ttattttgaa aagccccgca ctactgtagg ttggaaaggg ctgattaacg
     3661 atccgaaaat ggacggctct tttgatgtcg aaaccggctt acgtatcgca cgaaaactct
     3721 gtttggattt agccgaactt ggcttgccgt tagcgaccga agccttagat ccgatgacac
     3781 cacaatattt agcggatttg ttcagctggt cggcaattgg agcaagaaca actgagtctc
     3841 aaactcaccg tgaattagcc tcaggtttgt caatggcggt aggctttaaa aatggtacag
     3901 atggtgattt agccgttgca cttaatgcga tgcaatcttc cgctcaaagc catagcttta
     3961 tcggcattaa ccaacagggg caagttactt tactcaaaac aaaaggtaat gcagacggac
     4021 atattatttt acgtggcggt aaaaccccaa attatgaaaa gcaatatgtt gatgattgtg
     4081 aatgggtgct aaaacaagca aacttaccta cagcgattat gattgattgc agccacggca
     4141 attccaataa agattaccgc cgccaaccgc tggtggcaga aaatgtatta gagcagctac
     4201 ttgctggcaa tacttcgatt atcggtttaa tgattgaaag caatttacac gcaggtaatc
     4261 aatcatcaga attgccgttc gagcagatga aatacggtgt ttctattacg gatgcttgta
     4321 ttgactggca aactacagaa gagcttttaa ctcactttgc tgaaaagttg cgttaaagat
     4381 aatttgcaaa aaattgcata aaaacgaccg cttgtaaatt ggtaacaaat atgaacccat
     4441 tagccccatt acgagaacaa attgatcaag ttgatcaaca acttatcgcc ttactttctg
     4501 aacgcttagc tcttgtggca gaagttggga aagtcaaatc agaacacggc attcctgttt
     4561 atgctccgga gcgagaaacc gcaatgattt ccgcccgccg ctctgaagcg gaaaaacaag
     4621 gtattccggc ggatctcatt gaagatgtgc tacgccgtat aatgcgtgaa tcttatgcca
     4681 atgaaaacaa acacggcttc aaaagagtta attcggacat tcaaaaaatc gtgattgttg
     4741 gtggtaaagg gaaattaggt gggctgtttg gcaattattt aaccctatcc ggctataatg
     4801 ttgaggcatt aggacgtgat gattgggaca atgccgagca gattttagcc aatgcagatg
     4861 tggttattgt gtgtgtgccg attgccaaca ccctagcaac catcgagcgt ttacaatctt
     4921 atttaaccga aaatatgatt ttggcggatt taacctccgt caaacatcag ccgttgcaaa
     4981 aaatgctgga agtgcataat ggagcggtag tcggtttaca cccgatgttc ggaccggata
     5041 ttgcaagtca ggcaaagcaa gtggtcgctt gctgccacgg gcgtttccct gaacgttatc
     5101 aatggttgct tgagcaaatc aaaatttggg gggcaaaaat tgaagagatt gaggcagcag
     5161 cacacgataa tgcaatgacc tacattcaag ccctacgcca cttttccact tttgcattcg
     5221 ggctacatct ttctcgccag ccggtgcaac tctctcaatt attggcacta tcttcgccga
     5281 tttaccgctt agagttggca atgattgggc gtttatttgc ccaagacggc agcttatatg
     5341 ccgatattat tgccgataaa ccggaaaatt tagccaccat cgaaacctta aaagagagtt
     5401 ttgaacaagg gctagatttc tttaaacgca acgacaaagc cggttttatc aaggcttttg
     5461 aggaagtgca tcactggttt ggcgattatt ccgagcagtt cttgaaagag agtagagtat
     5521 tgctccaaca ggctcacgat tcaagaaagt aaaggtaggt tgaggttttg ctctgatagc
     5581 actagcgtcc acgctagtgc tatttaatat tctacaagcg gttaataaag agctgttttt
     5641 tgcaaatttt tatgcaaaat tatccgcttg ttttggcacg agcgtggacg ctcgcgccat
     5701 cggaagaaac atttttgtaa aattgccccc aaatctgacc gcttactgtg gctgaatttc
     5761 tccatttttt accgtaaaca aacaatcatc gcttctgtct tgccattgca tttgattgag
     5821 ctgatcttga gtaatggcgg taacgaatac ttgtgagcca ctttctctta aacgatgtgc
     5881 taaaagctca cgtttggttg ggtcgagttc ggaggcaaaa tcgtcaatta aaaataggca
     5941 ttggcgttgt ttttgggcga ccaaatgttc gccttgagcc agtcttaacg cacacatcaa
     6001 tagctttaat tgcccacggg aaagcacatc ttccaccggt aagccgttcg ctttaaaacg
     6061 gaaatcggct ttttgagctc caatcatcgt atagccaaga gctttatccc gctcaaaacc
     6121 ttgtgccaga atctcggcat aatccgcccc tttttcccag ccttgatgaa agctcaagcc
     6181 gatttcgatt tccggcagga aaaattggca ggttttctca atttcggggc gtaacgcttc
     6241 ggcgtattcg gctcgcattt cgctcacggc ataagtggtt ttcaccaatt cgatatccca
     6301 cgctttgagt tcttgataag agcggacttg ttgcaaagcc gaattacgtt gctttaataa
     6361 acggcgaaga ttgttccaat gagcgtagaa atcagggtgc tggtgaaata agccccagtc
     6421 caaaaaagca cggcgaaagc tcggaccacc gttaagtaag gttaagcctt cgggggtgat
     6481 cacttgcatc ggcaataaat gggctaaatc ggcaattttg ttgccgtctt caccgttgat
     6541 tttaagtgtc gtctcgccac tgcgaaattt ctgaatgccg accgaccaac tgtgctttgc
     6601 ctcgtcaatt ttaccgtgta gtacgaaatc gtctttatcg taatggataa tgcggttgct
     6661 gatatggctt ttgaatgaac gcccgtgtcc aagatagaaa attgattcca acaaactggt
     6721 tttgccactt ccgttcgccc cgactaaaaa attaaaatgc gggctaaatg ctaaatcggt
     6781 atgttggata tttctaaaat ggttgattaa taaacgggtt aaagccatag ttaaagtgcg
     6841 aggaataaaa agagtagcca ttttagcaaa tttgcaaaat tttgggaaaa attaaccgct
     6901 tgcggattag aaagtggttc agtagaataa gccgtttatt ttttattgaa aattaagagg
     6961 aaaaattatg tttggaaaag gtggcttagg cggcttaatg aaacaggctc agcaaatgca
     7021 agagcgtatg caaaaaatgc aagaagagat cgcccaatta gaagtaacag gcgagtctgg
     7081 tgcgggtttg gtaaaagtca ctattaacgg ggctcacaat tgccgccgaa ttgaaattga
     7141 tccatcatta atggaagatg ataaagagat ggtggaagat ttagttgccg ctgcctttaa
     7201 cgatgcggtt cgccgtgcag aagaaatgca aaaagagaaa atggcaagtg tgactgccgg
     7261 tatgcaactg ccgccgggta tgaaattccc attctaattt aagtatgcaa accagtcctt
     7321 tacttgaaaa tttgatggaa gccttgcgtg cattgcccgg tgtcggaccg aaatcggcac
     7381 agcgaatggc ttaccatctg ttgcaacgta atcgttccgg cggtgtggcg ttgtcaaaag
     7441 ccttaaatga ggcaatgagc catatcggac attgcaaatc gtgccgtact tttaccgaag
     7501 aggaagagtg tacgatttgt aaaaatcctc gccgtcagat gagcgggcaa ctttgtgtgg
     7561 tagaaatgcc ggaagacatt caagcgattg agcaaaccgg gcaattttca gggcgttatt
     7621 ttgtgctgat ggggcatttg tcgccgattg atggtatagg ccctcgtgaa atcggcttag
     7681 atttattgca acaacgcttg gaacaggaat ctttccacga agtgattttg gcgactaatc
     7741 cgaccattga aggtgatgct accgcaaact acattgctga aatgtgcaga atgtataacg
     7801 tgaaagctac tcgtattgct cacggtgtgc cggtcggtgg ttcattagaa atggttgatg
     7861 gcacaacgct ttctcactct tttgcaggac ggcgtgatat tgatatttaa agctatttct
     7921 gtgctaactt aattctgata taattactca actattttaa attattattt tgaggctaaa
     7981 aatggaaact attgacaaaa tcaaacaaca aatcagcgaa aatccgattc tactttatat
     8041 gaaaggttca ccgaaattcc catcttgtgg tttctccgct cgtgcggtgg aagcggtaat
     8101 taactgccaa gtgcctttcg gttatgtgga tattttaacc aatccggata ttcgtgcgga
     8161 attgccaaaa tttgcaaact ggccgacttt cccacaatta tgggtagaag gtgaattagt
     8221 tggcggttgt gacatcgtat tagaaatgct ccaaaaaggc gaacttcaaa ccttattaaa
     8281 agaaaccgca gcaaaacacg cagcataatt tcaaaccagt atgttaaggc tcttatgttt
     8341 aagagcctta attttttctt gcgatttagg cttaaacttc ttacctcaag agctattttg
     8401 ttttagaatg tcaaaattat ttcgtaacat aaaaataaaa ggacacaaca tggcattaaa
     8461 agagttagat tgggcaaatt taggcttttc ttatatcaaa accgattacc gtttcattgc
     8521 acattggaaa gacggaaaat ggaatgaagg cgaattaact caagacaata cactgcatat
     8581 tcacgaaggc tcaactgccc tgcactatgg gcaacaatgt tttgaggggt taaaagccta
     8641 tcgctgtaaa gatggctcaa ttaacttatt ccgcccggat caaaatgccg agcgtatgca
     8701 acgcaccgca gatcgtttat taatgccacg tgtgccaacc gagctgttta ttcgtgcctg
     8761 taaaaaagtg gtaaaagcca atcaagattg gttagggcct tacggttcgg gggcaaccct
     8821 ttatttacgt ccgtttttaa tcggcgtggg cgaaaatatt ggggtgaaag ctgcacctga
     8881 atttattttt tccgtattct gctgtccggt gggggcatat ttcaaaggtg gcttagcacc
     8941 ctcaaacttc attacaaccg actatgaccg tgcagcccca atgggaacag gtggtgtgaa
     9001 agtaggcggt aactacgctg cgagtttatt accgcacgaa ttggcggttg agcaaagttc
     9061 aactacccgt aaatttgccg atgcgattta tttagatccg aaaacccata ccaaaattga
     9121 agaagtgggg gcggcgaact tctttgggat taccaaagac aacaaattca tcaccccgat
     9181 ttcagagtcg attttgccaa gtattaccaa atactcattg ctacaccttg ctcaagagcg
     9241 tttaggtatg gaagcgattg agggagatgt gtatatcgac cagttagacc aatttgccga
     9301 agccggtgct tgtggtacgg ctgcggtgat tacgccggtt ggtggtattc aacataaaga
     9361 caaattccac gtcttctatt cagaaaccga agtggggcct gtcacccgcc gtttatacgc
     9421 agaattaacc ggtattcaat ttggcgatgt tgaagcaccg caaggctgga ttgtaaaagt
     9481 agagtaattt tacacaagta acaagcggtc gaattggcaa aactttttgc aaattcaacc
     9541 gcttgtcttt atttagagaa tatgaaaaag ttaatttttt taggtttatc agcacttgca
     9601 ttagctggtt gttcctcaac aatttctaat cctaatcaac tgattgggca atggcaatgc
     9661 actattgagt acgatgattt taatattcgt acggtggata atttacgatt ttccacaaat
     9721 gggactatga ccaatcaagg tggtatatat taccctattc aaaagtcgat ttttgagtat
     9781 tcattacaac agaatgggcg ctggagtgtg aaaaacgggg ctattgttta tcgtatcgtc
     9841 tcagaatctg tacagcgtag ccatcgttca caaatatggt ctgaattaca acgtgatgcg
     9901 gagctacaac aatttgaaga gaatttattt agctcacttt ctgatagtga taataataaa
     9961 acagtggaac taatcatcac tgattttgat gaaaaagaaa tggatatcaa gcaagaaata
    10021 aaagggcata aagcttataa agggcaatgt ataaaacagt agaggtaaaa atgattcaac
    10081 gttttgaagt aggtagccgt ttttcggaaa tggcaataca taacggtgtg gcttacttgg
    10141 cagggcaagt gccgttagat gacaccgccg atgcttacac ccaaacccag caagtgcttg
    10201 cagaaattga taaatggctg gcaaaagcca acagcgataa aagtaaaatt ctaatggcta
    10261 cggtttattt aaaagagatg gcagattatg cggaaatgaa ccgtgcgtgg gacgaatggg
    10321 ttgccccaaa taacgctcca ccaagagcgg cggtggaggc taaattagcc aatccaaatt
    10381 ggaaagtcga aattgtggtt accgctgcgg tataaatgaa aagcagaaag acgatctctg
    10441 tttttcatta tgattcgtac attttttcga tttgttgctt atagcgttct agaatgacct
    10501 ttcgtcttaa ttttaatgta ggcgtaattt cttccatttt ggtgctaaat gcttgcgaaa
    10561 gtagtgtaaa ctttttgatc tgttcaaaac ttgcaaggtc tttttgtaat tcgttaatgc
    10621 gttgttcaaa cattctgaca acctcataat gtttaatgag ttctaatctg tcttgatagc
    10681 gaatattgag cttttttgca tactcttcga ggctatcaaa gcaaggaact atcaacgcag
    10741 aaacatattt tttggcatca gcaatcaccg caatttgctc aataaactta tctttaccta
    10801 tttttccttc aatgtattgt ggggcaatat atttaccgtt tgaagttttc attaattctt
    10861 taatacgatc ggtaatataa agattgcctt ccgaatccag ttcaccggca tctcccgttt
    10921 ttagaaaacc ttcagcagta aaggcttgag cagtggcttc cggttttttg tagtaacctt
    10981 tcataaccaa gcctccacgc actaaaattt cattttcttc actaattttg acctcaacat
    11041 caggcattaa ggtaccggtt gagttgatat taaagccttt ttcctgccag catgaaatag
    11101 tggcagtagt ttcggtcatt ccgtatccaa gttttacatt gatgcctata ctttggaaaa
    11161 atagcccgat agacggatct aatttagctc ctccacacgg catcatacga atacgaccgc
    11221 ctagtaaggc tcgtaatttt cctagcacca atttatctgc cataatgtac tgcaagcggt
    11281 ggaaaaaggc tgatttttta ccaaacagat tgtcttcggc ggtacggatt gcccatttaa
    11341 ataacgctcg gcgatgtatc ggtgcttgtt ggactttatc ccacaccgca gtatagattt
    11401 tttcatagaa ccttggtacg gcacacatta atgtaggtcg taccgttgag agtgcttgac
    11461 gtacctgttg aggatcttcc agatagcaat ttactgcccc tctgtatagc acataagtga
    11521 cccaagcacg ttcaaagata tgcgataaag gtaaaaatga aagggatata tcattttcgt
    11581 caatatgagg gagtgcttta ttatgtgcct gaagttgatg agctaaatta gcataatcta
    11641 acataacacc tttaggctca ccggttgttc ccgaggtata aattaaagtg aataaatcct
    11701 ctaagcattt atcatttaaa cgtttggtta attcagcttc atcttgatta accttaatga
    11761 aatcttgcca atgttgagcg atagggaaat cacgcagatc tattgagtct ttcatcgcga
    11821 caatttttat taatagcgaa cagttgttcg ctatttctat ggcttgatca tattgttcct
    11881 gatcgccaac aaagaggatt tttatatccc cgtcattcag gatatattca agttgtttgg
    11941 tggtactggt tgcataaatc ggcactgcta ccgcacgaat ttgcattgca gcaatatcgg
    12001 taattgtcca acgaggcata ttttgtgcaa aaatagcgat tttctcttga acggcaagac
    12061 cgtttgccag caaggcataa gaaagattat tgacctgttt ttgtaattct aaccaactta
    12121 tttctgacca tttttcatct tgcataaaac gtaaagctgg gtggtggcta agagcctgaa
    12181 cttgctggtg gaaacggtgg ataaagtgaa aatctaaagt gctcataatc ttatttttac
    12241 tttctatttc agtgaacagt tgtacgctaa tataatagaa aatatgaaaa aaagaaacag
    12301 ttgtactctg aaacaaaggg ttttggatag gaagtaatca aggcaataga aatagataag
    12361 tagggtatcg tttagtacaa atgcaatatt tttcaaaaat gagaccgctt gtatatgcaa
    12421 caagcggtct gttttgttaa aaattttgca actaaattcg ttcaatatca aattgagcta
    12481 aatcaatcac atcaggtgta ccgtaaaaag cacagagggc tttacgcaag gtttcagctc
    12541 gtttgggaag gtagccacgt tctgcataga gcttgacttg gtcgtacact gcttgtttaa
    12601 aggctgaatt atcgccggga ttgcccgaga gattgtcggc actagcaaaa taacgaaaac
    12661 cggcagcagt tgctaacacc cattcaatcg cttgcggttt gatttccgca ctttcaaatt
    12721 cacgttggcg ttcggcagag cgtccgtccg gctcgtacca atagccaaaa tcttcaagtt
    12781 tacgccgagc ttctccagca acgagccaat gggcaatttc gtgcaaggca ctgctgtaat
    12841 agccgtgagc aaataaaatc acattgtaag ggcgttcgct cggcacacca tcttcgtcca
    12901 taaattcggg caagtaaatc ggataattac ccccccgctc taggcgagtg ttatattcat
    12961 cagaaaagca ttgattaaaa atgcgaataa tgtcttcaat tttatgattt tcttgattca
    13021 tttcttttct ttataactta ttcagccaag ctaaaaattg ctcggcatcc aaaaagccag
    13081 taacacgaga ttggctcatt tcattgccgt tttcatcaaa aaacagaatc gttggcaaac
    13141 ctaatacatt aaagtgtttc atcagctcga tattttcagc cgagtttttc gtcatatcga
    13201 tttgcaacac taccatttca ttcagtttgt tctgaacatt ttggtcacta aaggtgtatt
    13261 tttcaaactc tttgcaggcg acacaccagt cggcatagag atcgagcatc acttttttac
    13321 ctttggaagc ggtcaatttt gtctctaaat cggcaagtga ttgaattttt tctaacgcta
    13381 agtgcggtgt agtttgctgt tgagtggttg agccgttcca agctaaatct gcccaaggtt
    13441 tagcggcaat ggctaaagcg agcaataata agactttgat gatctttttc gtgattgaat
    13501 tagatggaat cgcatccacc aaccagatca aaaatgcaac cgcaagggcc gaccataaaa
    13561 acggttcata gtggcttggc agcacacggc ttaataagaa caccggtaag gcaagcataa
    13621 caaaaccgaa tgcagctttc acttttaaca gccattcgcc ggattttggc agaattttgt
    13681 tgccgaataa ggtaatcaaa atcagcggta agcccattcc cagtgcgagt agatagaggg
    13741 ctaagccacc ggtgactaaa tcgccacttt gtgccacata aagcaacgca ccggaaagtg
    13801 gggcagaagt acaaggggaa gcaattaagc ctgcgatcat ccccattaaa aacacgctac
    13861 ccaacgcacc accttgctgt ttttggctca ttgcattgag tttttgttgc cagctatttg
    13921 gtagctggat ttcgtataag ccaaacattg agcaggcaag cagaataaag acgatagata
    13981 aaccaatcaa caccggtggg ctttgtaagg cgatttggaa aggcaagccg atagccgcta
    14041 caattaagcc aagtaaggtg taagtaactg ccattccttg cacataggca atacttaaca
    14101 gcaatgcttt agcggtagaa gggcgttgct tatttccaat tacaatcgca gagagaagtg
    14161 gtagcatcgg cagtacgcaa ggagtgaatg ctaatccaac gcctaataca aaaaaccaaa
    14221 aaatggaaaa acgattgtta gctaaatttt cagccagttg atcttgctct gcttttgcca
    14281 cattttcagg gggcgccata ttgtcggttt ttgcaaaatt ttcgctcttt tcgaccgctt
    14341 gtgcttccag ttgcgccagt tcttcaggtg tagcagagag aatactgtct aatttaagct
    14401 caacccgttc cggtggatag caaaagcctt tggtacaccc ttgatattcc actacgattg
    14461 aggcgttgtc tttaatttct ttaaacggta cctttagccc taagtggttg cgatagattt
    14521 ccacctgccc gaaaaattca tcgttatatt gctcggcagc gggaaaagtg atgtcgccta
    14581 tctcaatatt ctgtggcgtg acacggattt cttttttata aagataataa ttgtctgcaa
    14641 tatcccaatt taactgtaat gtttcatttt cattttggat tgaaaaaaca aaggcttctt
    14701 ccgattttag gaatttgggt tgagagaaaa gatttgcgtg agatgagttt atcatcaata
    14761 aactcaagac gagtgaaaaa aagtatctaa tcatattgaa atcctatttt taattgtctc
    14821 ggc
//
LOCUS       DANLXO010000068        14687 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.068, whole genome shotgun sequence.
ACCESSION   DANLXO010000068 DANLXO010000000
VERSION     DANLXO010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14687
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.068"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..588
                     /locus_tag="PXD69_001738"
     CDS             <1..588
                     /locus_tag="PXD69_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL6283919.1"
                     /translation="GDYLESSDAQIFRDKYQELEFKPNPDFNGPYYGLDFGFANDPTA
                     CVKCWVFDDDLYIEREAGKVRLELDETAAYLANALPDLSNYTVRADSARPESISYLKR
                     HGLPYIQPVPKWKGSVEDGVEHIKSYRKVYIHPSCTEVLKEFRLYSYKTDRLSGDVLP
                     IIIDAHNHYIDAIRYALNPLIQARGEAKQCALKVY"
     gene            601..2004
                     /locus_tag="PXD69_001739"
     CDS             601..2004
                     /locus_tag="PXD69_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4055 domain-containing protein"
                     /protein_id="HDL6283920.1"
                     /translation="MPNSISADFAALKAKTKIIDDLLGGTQKMRQAGQTYLYKMKMEE
                     EDGYKNRLNRSTLYPALRETLSQMLGRVFFNPINVEDVHKQIEPLFDDIDLEGNNLDV
                     FASRWFYAALAYGVSYCLVDFVRVENARSLAEEKAQNARPYLVHIKPQQVLGFKTAKI
                     NGKTAFTQFRYKETVTEDDGEFASKQVNYIYVYEIGRVRKYKNDEGGLSLVADMQIKA
                     QNTPLAFVPIVPFITKPIDVWGMGEPPLMELAYLNIKHWQSQSDQDNILNIARVPLLA
                     IFSDTQIKSLEIGSSAISLPKDSTMQFIEHSGSSINAGLTSLKELEDQMKTAGAKLLT
                     KTALAMTDSQAKDEAGKEISQLRHYANKFEDALDLAFEYIGHWLGIGVDEVGTSQISG
                     NIDNDLDPNASMATIIQLRNAGVISNHSTFEEAKRRGLLSDSAKWEDEQARLQAEGLS
                     DDFTNPFNSNQSENAAS"
     gene            1952..3613
                     /locus_tag="PXD69_001740"
     CDS             1952..3613
                     /locus_tag="PXD69_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL6283921.1"
                     /translation="MTLQIHSIRTKVKTPLAKRIAHALTDRKILQFRFDAHLRNQVWQ
                     RLTKTQKALLNRINAAGIDALPKRELDKLLKELKAEIAKNYQETTAYIQPELSGFFAV
                     EKQALTELYNDEIGYDFFNQVPSYQRKATQQATIIAGMPLESWFEKQGSELSFKFEST
                     IRQGLLEGRQTPEIAKATAELFGISRRHADTLVITAVAKVADDAHKALRDENLDLIKG
                     EMHLSTLDTRTSTVCQVRDGKMWDTDYKPIGHSLPYQRPPLHPRCRSILQLVMKDWKE
                     LGFDDVKEMPKSTRASADGQVSEKTNYEEWLSSKTPEEQDKALGKGKADLWRRGVITF
                     SDMLDQSARPLTLKELYSLKNSSSVDKMDSVELVRKKAVAVEPMITRDVVSIITASGG
                     EPAGLDFRLKSLSSLQRKIDTEIMAGVSKEQAIASIRDVIRYTAILDEQRFVEQYQKM
                     QKDLEKQGYSTIIVKNTWKSNNAYKGINTFVSTFIEKNNIIFELQYHTKQSFELKNGK
                     LHELYEKFRDLNIPLAKKSEILLEMQKLSANLKEPKNIDLIKEKK"
     gene            3613..3831
                     /locus_tag="PXD69_001741"
     CDS             3613..3831
                     /locus_tag="PXD69_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283922.1"
                     /translation="MYQYYLAQVGNEQQKLIRGMPDNLLSFSVYEPEQEDWDNKFGPF
                     WADKILISGFDAYEEISEKEAIRFIKVH"
     gene            3832..4245
                     /locus_tag="PXD69_001742"
     CDS             3832..4245
                     /locus_tag="PXD69_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDL6283923.1"
                     /translation="MCQAEQFARQLHYGQTDKAGKPYIEHLAFVAENISTKNEETEAV
                     AWLHDSVEDTQCSINDIRHIFGDVIADAVEAITKKQGESYFCYLDRVKSNPIAKVVKL
                     ADLTHNLCLERLPKITEKDLKRAEKYKSALEYLQA"
     gene            4363..5097
                     /locus_tag="PXD69_001743"
     CDS             4363..5097
                     /locus_tag="PXD69_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283924.1"
                     /translation="MKLKLDENGHVVVENGMPVYIHDDGKEIPFDALKATQKITQLNA
                     EAKQHREAKEKAEADLKAFSGIDDPKAALEALKTVANLDAKKLIDAGDAEKVKAEIIK
                     GYDEKLAVATAQAEKLQQQLHAELIGGSFARSKYAQEHLNIPSDVVQAFFGKHFSISD
                     DGKVVAKFADGGEIFSRTRPGEKADFEEALEALVSAYPNKDAILKPSGSSGAGAGGGS
                     RSSSMPKTLSDCKTDEERIAYLQANS"
     gene            5163..6110
                     /locus_tag="PXD69_001744"
     CDS             5163..6110
                     /locus_tag="PXD69_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005643804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283925.1"
                     /translation="MAFDLQVFNKQTQLALTETVDQAIEKFNAASGGAIILQNKPAEG
                     DFDIRASFKGIAGLVRRRNVYGTGTVDAKRLEQLLDVAVKVAAGTAPIEYQPSQYKWI
                     LLNPELAAIEIGTQLAKARVADMLNTAIAGTVAAISGNTAMTLDEKTAAPTFRILNKG
                     AAKMGDRAGSLKAWVLHSTTLHGLYDNALTNAENLFKYENVNVIRDPFGRVFVVTDSP
                     ALMASDGTFNTLGLVENAVVVSGNNDFDSVLVPKTGGENLSAVYQAEWTYNLGILGYK
                     WDMTAGGKSPNDTALGTPTNWDKSVTSNKDTAGVLVKTK"
     gene            6170..6520
                     /locus_tag="PXD69_001745"
     CDS             6170..6520
                     /locus_tag="PXD69_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283926.1"
                     /translation="MKRILYFTTDFSAKNIAFAKAHGVLMRNLNAYHPSDTLENADAV
                     CGNVPQAYQHLPLFELPESNQKSGQDLKTLKTEEIKEKLTELGIAFEANAKKETLLTL
                     LTQAVGRDGTNDAK"
     gene            6510..6947
                     /locus_tag="PXD69_001746"
     CDS             6510..6947
                     /locus_tag="PXD69_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283927.1"
                     /translation="MLNSYMTVEQANAYHDIRMSREAWNALSDQEKQQRLVSASDFLD
                     FNYRFSGEKADLTQEREFPRKGFEAIGIPKAVQFAVCELALQDNLTANQEAQMSSVRV
                     GPVSVNYDNSSPQNSVNRFEYVRQLLSTWLDRSSFGTVKLERS"
     gene            6947..7318
                     /locus_tag="PXD69_001747"
     CDS             6947..7318
                     /locus_tag="PXD69_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283928.1"
                     /translation="MADFYGNLGKISHSLIKQFGQPCSVTINEQGRYNPATGERKKGS
                     STVHAGYCLFDNLAFDFRNQQSVSVQQGDVMIYLTADCKPVLNAVIEANGEKWSVINV
                     QPIRPAATTMIYQVQGRKADG"
     gene            7311..7724
                     /locus_tag="PXD69_001748"
     CDS             7311..7724
                     /locus_tag="PXD69_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL6283929.1"
                     /translation="MGSFHAQIARFVEQTQQKADRALRVIALQTLSGVQKKSPVDTGQ
                     LRRSWTVALNGFPSSYNGSQTVLNSAKFGDMIVIATNKPYAPMLEYGLYPNPPKKPTG
                     KTKNGYSIQAPNGMVRITVQEMQAFIRNNPQLGVS"
     gene            7724..8116
                     /locus_tag="PXD69_001749"
     CDS             7724..8116
                     /locus_tag="PXD69_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283930.1"
                     /translation="MRPIIRSVLEQHLAELNPFNTVWEGIIDSPKLPYQTVSMTTSTN
                     ETATIGNTPKAKQSGFLQVTLYYPLDQGTKAIEERADEIFRHFFGQVWIEENVQILVQ
                     QPPLVASLYRLDNSIALPITIYFTAYEL"
     gene            8126..9148
                     /locus_tag="PXD69_001750"
     CDS             8126..9148
                     /locus_tag="PXD69_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283931.1"
                     /translation="MSILGNSQGTKRTVVFAKESSFGTKAAPTGAKIMPRVETSLNTN
                     FESYQSEEIRDDLQRSASVIGFEKVEGDIKGELAAGQWAAFFAAALRGSFTAQAKKPI
                     ITKTTDGTGEKNGKILIVPKTSHTSDSFTLEDVFKDINVSRQYLGCRVSKLSLDVQPN
                     GIASITVSFLGQRGEESTTAYFTNPTDLTQSGKLAGVKGSLQVNKRPVGLVTAFKLDI
                     DLGASSEPVLGAKYAPDVFIGTVAVSGSFTMYFQDKTMIDAVRNGTDLSLALRMDAEE
                     RTNTDYLTIILPGVKVTSNELDDGAKNIMQTLNFDAFPAVWDSASQIDNVLKVATTMI
                     VQDSLA"
     gene            9238..9639
                     /locus_tag="PXD69_001751"
     CDS             9238..9639
                     /locus_tag="PXD69_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283932.1"
                     /translation="MNLNALSKEKQLAEHRFELVHPVSGEPLGVFMSVVSAKSDKAQR
                     FAEKQLRQEQMRELENAKSRKPKFKGLGDMIAESRAMAIDRLTGWENVEWNEKPLEFS
                     DQNAELLLTECDWIVEQIFEHSNDLGKFLKS"
     gene            9654..9980
                     /locus_tag="PXD69_001752"
     CDS             9654..9980
                     /locus_tag="PXD69_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283933.1"
                     /translation="MYAEKTFKLDKKLKGSESTLREHLQAIEMQTGITPEELHNPEPS
                     PAVAYLLGWFFELAMSRQSGMSLNPISYTEIDAWSRLFARHLEQWEISVIKQLDMIYL
                     NVQQTE"
     gene            9982..10305
                     /locus_tag="PXD69_001753"
     CDS             9982..10305
                     /locus_tag="PXD69_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6283934.1"
                     /translation="MDTFNFQPNWGLNVQRKPEVMKIAFGDGYEQVAPKGLNHNLRTY
                     SAVFTGTEARIKQIEAFFERQGGYKAFLWTPYGGKEGKFRCEEWEVSISSGKWTLSAT
                     IREVL"
     gene            10392..11084
                     /locus_tag="PXD69_001754"
     CDS             10392..11084
                     /locus_tag="PXD69_001754"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283935.1"
                     /translation="MKKIFVSALLLTCSLSALGNSSYELIIDSMQDLEKHKPEILSIP
                     EADRNTFIRYMMRKELRIKLNQGRLADGLTVREAIQNQQAFEKDRNSKMQQEKQKKET
                     EKAEKEKAVTDFNQKFELSITGARKAKNALNQDILLVSLSLKNNSDKPIIAVQPDIQF
                     VLGEDKQTISSMRPKKFENGIPPNGSEIFEFGFDLDDMFALKAEKNIEKLRAVFQTAE
                     VLFADGTTEKLQ"
     gene            11148..11972
                     /locus_tag="PXD69_001755"
                     /pseudo
     CDS             11148..11972
                     /locus_tag="PXD69_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015691083.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
     gene            14016..14174
                     /locus_tag="PXD69_001756"
                     /pseudo
     CDS             14016..14174
                     /locus_tag="PXD69_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            14182..>14687
                     /locus_tag="PXD69_001757"
     CDS             14182..>14687
                     /locus_tag="PXD69_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL6283936.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRNLKDKSGNAGRVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLITSIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNA"
BASE COUNT         4651 a         2826 c         3416 g         3794 t
ORIGIN      
        1 ggggactact tagaatcctc tgatgctcaa atctttagag ataaatacca agaattagaa
       61 tttaagccta accctgattt taacggtcct tattacgggc tggactttgg ttttgccaat
      121 gacccaacag cctgtgtgaa atgttgggtg ttcgatgatg acttatatat cgagcgtgaa
      181 gcagggaaag taagactaga gctcgatgag accgctgctt atttagcaaa tgctttgcct
      241 gatttgagta attatactgt tagagcagat tctgctcgcc cagaatccat cagttattta
      301 aaacgacatg gattgcctta tattcaacct gttccaaagt ggaaaggctc agtcgaagat
      361 ggggttgagc atataaaatc ttatcgtaaa gtatatattc atccaagttg tacagaggta
      421 ttgaaagaat ttcgccttta tagttacaaa acggacagat taagtggtga tgtactgcct
      481 atcattattg acgctcataa ccactatatt gatgccattc gttatgcctt aaatcctctt
      541 attcaggcaa gaggcgaggc gaagcaatgt gcattaaagg tttattaaaa tgaggtaaca
      601 atgcctaact ccatctcagc cgattttgcg gcattaaaag caaaaacaaa aatcatcgat
      661 gatttactcg gtggcacaca aaaaatgcga caagcgggtc aaacctacct ctataaaatg
      721 aaaatggaag aggaagatgg atataaaaac cgattaaatc gttctacgct ttatccggca
      781 ttgagggaaa cgctttcgca gatgttgggg agagtgtttt ttaatccgat caacgtagag
      841 gatgtgcata aacaaatcga accattgttt gatgatattg atttagaggg taacaatctt
      901 gatgtattcg cttctcgttg gttttatgct gcattggctt atggcgtatc ttattgcttg
      961 gtggattttg tgagggtaga gaatgcccgc agtcttgcag aagaaaaagc tcaaaatgca
     1021 cgtccgtatt tggtgcatat taagccgcaa caagtgctgg gctttaaaac agccaaaatc
     1081 aacggtaaaa ctgcttttac ccaatttcgt tataaagaga cagttacaga agatgatggc
     1141 gagtttgctt ctaaacaggt gaactacatt tatgtttatg aaatcggacg tgtccgaaaa
     1201 tataagaacg atgagggtgg cttatcactg gttgctgata tgcaaatcaa agctcaaaat
     1261 acaccgcttg catttgtgcc tattgttcca tttatcacta aaccgattga tgtttgggga
     1321 atgggtgagc cgcctttaat ggagctggct tatttaaata ttaagcactg gcaaagtcag
     1381 tcagatcaag acaatatttt gaatattgct cgtgtaccgc tattagctat tttctctgat
     1441 actcaaataa aatcccttga aatcggctca agtgcaatat ctctgccgaa agacagtaca
     1501 atgcagttta ttgagcattc aggttcgtct attaatgccg gtttaaccag tctgaaagaa
     1561 ctagaagacc aaatgaaaac tgccggtgcg aaactgctaa ctaaaacagc attagcaatg
     1621 acggatagtc aggctaaaga tgaagcaggt aaagagatct cacagcttag acattatgct
     1681 aacaaatttg aagatgctct cgatttggct tttgagtaca ttgggcattg gctaggtatc
     1741 ggcgttgatg aagttgggac ttcgcaaatt tcaggcaata tcgacaatga tttagatcca
     1801 aatgcgtcaa tggcaaccat tattcagcta cgcaatgccg gtgtcatttc aaatcactct
     1861 acgtttgaag aagctaaaag acgaggttta ttgtcagata gtgcaaaatg ggaagacgaa
     1921 caagcaaggt tacaagcgga aggtttaagc gatgacttta caaatccatt caattcgaac
     1981 caaagtgaaa acgccgctag ctaaacggat cgctcacgca ttaacagatc gtaaaatatt
     2041 gcagttccgt tttgatgctc atttacgaaa tcaagtttgg caacgactca caaaaacgca
     2101 aaaggcatta ttaaaccgaa ttaatgcagc cgggatagat gccttaccga aaagagagtt
     2161 ggataaactg ctcaaagaac tcaaagcaga aattgcaaaa aattaccaag aaacgaccgc
     2221 ttacattcag cctgaattaa gcggtttttt tgcggttgaa aaacaggcac tgactgagct
     2281 ttacaatgat gaaatcggct atgatttttt caatcaagtg ccgtcatatc aacgtaaagc
     2341 tacgcaacaa gcgactatta ttgccggaat gccgcttgaa agttggtttg aaaagcaagg
     2401 atcagagctt tcgtttaaat ttgaaagcac cattcggcaa ggcttgttag agggtaggca
     2461 aacgcctgag attgccaaag ctacggctga attatttggt atatccagac ggcacgctga
     2521 tacacttgtc attactgctg tggcaaaagt ggcggacgat gctcacaagg cattgcgaga
     2581 tgaaaatctt gatttaatta agggtgagat gcacttatca acgctcgata cccgcaccag
     2641 tactgtttgt caagtgcgag acggtaagat gtgggacact gattacaagc ctatcggaca
     2701 cagtttgccg tatcaacgcc caccacttca ccctcgctgt cgttcgattc tgcaactggt
     2761 gatgaaagac tggaaagagt taggctttga tgatgtgaaa gaaatgccga aaagcactag
     2821 ggcgagtgca gacgggcaag tgtcggagaa gacaaactat gaagagtggc tcagtagcaa
     2881 aacaccggaa gagcaagata aagcgctagg caaaggcaag gcggatttgt ggcggcgggg
     2941 agtgataacg tttagcgata tgttagatca aagtgctaga ccattgacac taaaagagct
     3001 atattcatta aaaaatagtt cttcggtaga taaaatggat agtgtggaac ttgtccgtaa
     3061 aaaggctgtt gcagttgagc ctatgattac tcgtgatgta gtatcaatta ttacagcatc
     3121 tgggggcgag cctgccggct tagattttcg cttgaaatca ctatcatctt tgcagcgaaa
     3181 aattgatacg gaaataatgg ccggagtgtc aaaagagcaa gcgatagcaa gtattcgaga
     3241 tgttattcgc tacactgcaa tcttagatga acagcgtttt gttgagcaat accaaaaaat
     3301 gcaaaaagac ttggagaaac aaggttattc tacgatcatt gttaaaaaca cttggaaatc
     3361 aaataatgct tataagggca ttaatacgtt tgtgagcact tttattgaaa agaataatat
     3421 aatttttgaa ttgcaatatc atacaaaaca aagttttgag ttgaaaaacg gtaaattgca
     3481 cgagctctat gaaaaattca gagatctgaa tatacctctt gcaaaaaaat cagaaatttt
     3541 acttgaaatg cagaagttaa gtgctaatct aaaagagcca aagaacattg atttaatcaa
     3601 ggagaaaaaa taatgtatca gtattattta gctcaagttg gcaatgaaca gcaaaaactt
     3661 attcgtggta tgcctgacaa tctacttagt ttctcggttt atgagcctga acaagaagat
     3721 tgggataata agttcggccc attttgggca gacaagatct tgataagcgg atttgacgct
     3781 tacgaggaaa tttcagaaaa ggaagcaatc cgatttatca aggtacatta aatgtgtcaa
     3841 gctgaacaat tcgctcgcca actgcattat ggacaaacag ataaagctgg aaagccatac
     3901 attgagcatc ttgcttttgt tgcagaaaac attagcacaa aaaatgaaga gacagaagca
     3961 gtagcttggt tgcacgacag tgtagaagat actcagtgtt caattaatga tattcgtcat
     4021 atatttggcg atgttattgc tgatgcagtt gaggctatta ctaaaaagca aggcgaaagt
     4081 tatttttgct acttggatag agtaaaatca aatcctattg ctaaggtggt taagttagct
     4141 gatttgactc ataatctttg ccttgagcga ttgcccaaga tcactgaaaa ggatcttaaa
     4201 cgagcagaaa aatacaaatc agcattggaa tatctacaag cctagcctaa aacgctaggc
     4261 ttttttatcg caatttttta ccccaaactg accgtttgtg agccatcaca ggcggttttt
     4321 tattatcggg cggaagccca ccagcaatga gaggaagctc aaatgaaatt aaaattagac
     4381 gaaaacggac atgtagtagt tgaaaatggt atgcctgtgt atattcacga tgacggaaag
     4441 gaaattccgt tcgatgcact aaaggcgaca cagaaaatca cacaactgaa cgctgaggca
     4501 aagcaacatc gagaagctaa agagaaagcg gaagccgact taaaagcatt ctcagggatt
     4561 gacgatccga aagctgcact cgaggcatta aagacggttg ccaatttaga tgctaaaaag
     4621 ctgattgatg ccggtgatgc ggaaaaagtc aaagcggaaa tcatcaaagg ttacgatgag
     4681 aaattagctg tggcaaccgc tcaagccgaa aaactgcaac agcagttaca cgctgaatta
     4741 atcggtggtt cgtttgctcg gtctaaatac gctcaagaac acttgaatat tccgtctgat
     4801 gtcgtacagg cattcttcgg taagcatttt agtatttcgg atgacggcaa agtggtagct
     4861 aaatttgctg acgggggcga aatctttagt cgcacccgcc cgggcgaaaa agcagatttt
     4921 gaagaggcat tagaagcttt agtaagtgct tatccaaata aagacgctat tttaaaacca
     4981 agtggttcaa gtggggcagg agcaggtggc ggatcacgca gttcatctat gccgaaaaca
     5041 ttatcggact gcaaaacaga tgaagagcgt atcgcttatc ttcaagcaaa ttcgtaaggt
     5101 gcaagaggtt gcaccttttt tattttcggt gcaatcgcac cactttttag aggaaaatca
     5161 aaatggcatt tgacctacag gtttttaaca aacaaacgca attagccttg accgaaactg
     5221 tcgatcaggc tattgaaaaa ttcaatgcag catcaggcgg tgcaatcatt ttacagaaca
     5281 agccagctga aggtgatttt gatatccgtg ctagctttaa aggtattgcc ggtttagttc
     5341 gccgccgtaa tgtgtacggt acaggtacgg tagatgcaaa acgtttagag caattactgg
     5401 acgtagcagt taaagtggcg gcaggtacag caccgattga ataccagccg agtcaatata
     5461 aatggatttt attaaatcct gaattggcgg cgattgaaat cggcacacaa cttgccaaag
     5521 cccgtgttgc tgatatgctc aatacggcta ttgccggcac ggttgctgca attagtggca
     5581 atacagcaat gacacttgat gaaaagaccg ccgctccgac attccgcatt ttaaacaaag
     5641 gtgcagcgaa aatgggtgat cgtgccggtt cgcttaaagc gtgggtgttg cactccacaa
     5701 ccttacacgg cttatacgat aatgccttaa ccaatgcgga aaacttattc aagtacgaaa
     5761 acgtgaacgt aattcgtgac ccgtttgggc gtgtatttgt cgtcacagac agcccggctt
     5821 taatggcttc agacggtaca tttaacacct taggcttggt tgaaaatgcg gtggtagttt
     5881 ccggcaacaa tgactttgac agcgtgttag tgccgaaaac cggcggagaa aacctttcag
     5941 cagtttacca agctgaatgg acctataact taggaatcct aggttataaa tgggatatga
     6001 ccgctggtgg taaatcaccg aacgataccg ccctaggcac accgacgaac tgggataaat
     6061 cggttacctc caacaaagac accgccggtg tattggtaaa aacgaagtaa tttttaaccg
     6121 cttgtagata aggtttacaa gcggttgttt ttttatctgg agtttgcaaa tgaaacgaat
     6181 actttatttt acaacggatt tttcggcaaa aaacattgcc tttgccaaag ctcacggtgt
     6241 attaatgcgg aatctgaacg cttaccaccc atcagacacc ttagaaaatg cagatgcagt
     6301 gtgcggtaac gtacctcaag cttatcaaca tttaccgttg tttgaattgc ctgagtctaa
     6361 ccaaaaatca ggtcaagatt tgaaaacctt aaaaaccgaa gaaattaagg aaaaactgac
     6421 tgaattaggt attgcttttg aggcgaatgc caaaaaagaa acattactaa ccttactcac
     6481 tcaggcggtg ggacgtgacg gaacaaacga tgctaaatag ttatatgacg gttgagcaag
     6541 ccaacgccta tcacgacatc agaatgagcc gtgaggcgtg gaatgcgtta agcgatcaag
     6601 aaaaacagca acgattggtg tcagcgtctg attttctgga tttcaattat cgtttttcag
     6661 gcgaaaaagc agatcttact caagagcgtg aatttccacg caagggtttt gaagctatcg
     6721 gtattcctaa agccgtgcaa tttgcggtat gtgagttggc attgcaagat aacttgaccg
     6781 caaatcaaga agctcaaatg agtagcgtaa gagttggccc ggtttcagtt aattatgata
     6841 acagttcacc gcaaaacagc gtgaatcggt ttgagtatgt gaggcagttg ctttccactt
     6901 ggttagatcg atcttctttc ggcacggtta agttggagcg tagttgatgg cggattttta
     6961 cggcaattta gggaaaatct cccattcttt gattaagcaa ttcgggcagc cttgtagtgt
     7021 aacaattaac gaacaaggca gatacaaccc tgcaaccggt gagcggaaaa aaggtagctc
     7081 aacggttcac gcaggctatt gtctgtttga taatttggcg tttgatttcc gcaatcagca
     7141 atctgtcagc gttcaacaag gcgatgtgat gatttatctc actgccgatt gcaaaccggt
     7201 attaaatgct gtgattgaag caaacggcga aaaatggtcg gtcatcaacg tccagcctat
     7261 acgcccagca gctaccacga tgatttatca agtacaaggg agaaaagccg atgggtagtt
     7321 ttcacgctca aatcgcccgt tttgtggaac aaacgcaaca aaaagcggat agggcgttaa
     7381 gggtaattgc cctgcaaacc ttaagtgggg tgcagaagaa atcgcctgtc gataccggac
     7441 aacttcggcg tagctggacg gtggcattaa atggtttccc gagcagttat aacggcagtc
     7501 aaaccgtgct gaatagtgct aaattcggcg atatgattgt gattgctacc aataaacctt
     7561 atgcaccaat gctcgaatat gggctttacc cgaacccacc aaaaaaaccg accggcaaga
     7621 ccaaaaacgg ttattcaata caagcaccta atggaatggt gcgaattacc gtgcaggaaa
     7681 tgcaagcctt tatccgcaat aatccacaat taggagtaag ctgatgcgac cgattatccg
     7741 ctcggtatta gagcaacatc ttgccgaact caatccgttt aatacggttt gggagggcat
     7801 catcgacagc ccgaaactgc cgtatcaaac cgtatcaatg acgacttcaa ccaacgaaac
     7861 cgccacgatt ggtaatacgc cgaaagccaa acagagcggt tttttgcagg tcacgcttta
     7921 ctatccgcta gatcagggga caaaggcgat tgaggaacga gccgatgaga tcttccgcca
     7981 ctttttcggg caggtctgga ttgaggaaaa tgtgcaaatt ctggtgcaac agccaccgct
     8041 tgtagcctca ctttatcgac tggataacag cattgcctta cccatcacca tctattttac
     8101 cgcttatgaa ctataggaga acccaatgtc tattctaggc aattcacaag gcacaaaacg
     8161 tacggtcgtt tttgccaaag agagttcttt cggcacgaaa gctgctccga caggcgcaaa
     8221 aattatgcct cgtgttgaaa cctcactcaa taccaatttt gaaagttatc aatcggaaga
     8281 gatcagagat gatttacaac gctccgcctc tgtgatcggc tttgaaaagg tcgaaggcga
     8341 tattaaaggc gaactagccg ccggacaatg ggcggcattt tttgcggctg cattacgtgg
     8401 ttcatttacc gctcaggcga aaaagccgat tattaccaaa accacagacg gcaccggcga
     8461 gaaaaacggt aaaattttga ttgtgccgaa aaccagccac acctccgaca gtttcacgct
     8521 ggaagatgtc ttcaaagaca tcaacgtcag ccgccagtat ttgggatgtc gtgtatcgaa
     8581 actcagcctt gatgtgcaac caaacggtat tgcctcgatt acagtctcat ttttagggca
     8641 acgaggcgaa gaaagtacaa cagcctattt taccaatccc accgatttaa cccaatccgg
     8701 caagctggca ggggtaaaag gctcattgca ggtcaataaa cgcccagtcg ggttagtgac
     8761 ggcctttaaa ctggacattg atttaggggc aagcagtgag ccggtattag gggcaaaata
     8821 cgcccctgat gtctttatcg gtacagtggc agtgagcgga tcgtttacga tgtacttcca
     8881 agacaagacg atgattgatg cggtgcgtaa cggcacagat ttatcccttg ctttgcggat
     8941 ggatgccgaa gagcgtacca ataccgacta tttaaccatt atcttaccgg gtgtcaaagt
     9001 gacctcaaac gagttggacg atggggcgaa aaacattatg cagacactca attttgacgc
     9061 attccctgcg gtatgggatt cagcaagcca aatcgacaac gtgctaaaag tcgccaccac
     9121 aatgattgtg caagacagcc tcgcttaatc gaaattttgc aaaaaaataa ccgtatctaa
     9181 ccgcttgccc tcaaacaagc ggtctttttt atccccaatt tacaaaagga aacccaaatg
     9241 aatttaaacg cattaagtaa agaaaaacag ttagccgaac accgttttga gctggttcac
     9301 cctgttagtg gcgaaccgct cggcgtgttt atgagcgtcg tgagtgctaa gagtgataag
     9361 gctcaacgct ttgccgaaaa acaattacgc caagaacaga tgagagagct ggaaaatgcc
     9421 aaatcccgca agccgaaatt caaaggctta ggcgatatga ttgccgaaag tcgtgcaatg
     9481 gcgattgacc gcttaaccgg ctgggagaat gtcgaatgga acgaaaaacc gttggagttt
     9541 tccgaccaga atgcggagct acttttaacc gaatgtgatt ggattgtgga gcaaatcttt
     9601 gagcattcga acgatctggg aaagttcttg aagagctaat tgatgattta caggtgtatg
     9661 cagagaaaac gtttaagttg gataaaaaac ttaaaggcag cgaaagtacc ttgcgagagc
     9721 atttgcaggc aatcgaaatg caaactggca ttacaccaga agaattgcat aaccctgaac
     9781 ccagtccagc ggtggcctat ctgctgggct ggttcttcga gttggcaatg agccgacaat
     9841 cgggtatgag cttaaaccca attagctaca ctgaaattga tgcgtggagc aggctttttg
     9901 ctcgtcatct cgaacaatgg gagatcagcg taattaagca gcttgatatg atttacttga
     9961 acgtacaaca aacggagtag tatggatact ttcaactttc agcccaattg ggggcttaac
    10021 gtacagagaa agccagaagt gatgaaaatc gcctttggtg acggttacga acaagtcgcc
    10081 cctaaagggt taaaccataa tctccgcact tattccgctg ttttcaccgg cacagaagca
    10141 cggattaaac agattgaggc attttttgaa cgacaaggcg gctataaggc ttttctttgg
    10201 acaccttacg gcgggaaaga ggggaaattc cgctgtgaag agtgggaggt aagcataagc
    10261 agcgggaaat ggacgctgtc ggcgacgata agagaagtgt tgtagttttt tctgattttg
    10321 tgaactggtt cacactctgt gggttggata taggttagaa tttaagtcta atttgcttaa
    10381 cggagtcttt tatgaaaaaa atttttgttt cagccttatt gctcacttgc tcgttatctg
    10441 cacttggaaa ttcctcgtat gagttgatta ttgactcaat gcaagatctt gaaaagcata
    10501 aacccgaaat tctatctata ccagaagcgg atagaaatac ttttattcgt tatatgatgc
    10561 gaaaagaact gcggataaag ttaaatcaag gcagattagc ggatggtcta actgtgagag
    10621 aagctattca aaatcaacag gcatttgaaa aagatagaaa tagcaaaatg cagcaggaga
    10681 agcaaaaaaa agaaacagag aaagcagaaa aagaaaaagc tgttacggat tttaaccaaa
    10741 aatttgagct atccattaca ggggcgagaa aggcaaaaaa tgcactaaat caagatattt
    10801 tgcttgtttc attaagtcta aaaaataact cagataagcc aattatcgct gtacaaccgg
    10861 atattcaatt tgtactgggt gaagataaac aaactatttc atccatgcgt ccaaaaaaat
    10921 ttgaaaacgg cattccgcct aatggctcag agatttttga gtttgggttt gatttagatg
    10981 atatgtttgc tttgaaagca gaaaaaaata tagagaaatt gagggcagtc ttccaaacag
    11041 cagaagttct ttttgctgat ggaacaactg aaaaacttca atagtaattg gtaaatcttc
    11101 attggccgct tgtagaaata caggcggttt ttttattgga gcaagctatg gcagatttag
    11161 caacactggc gattaaaatc gaaacagaag gcgcaagccg agcaagtgca gatctaagta
    11221 aggtcgagca atctgcaaag aacacagaga aagccgcaga taatctgacg cgcgcaatgg
    11281 gaaatttgaa gcggatttta gcgattgcag ggctggctgg tgggttatcc gcttacctag
    11341 atatggctga aagaatgcag tcgttaaacg cacagcttaa atttgttact aactctcaat
    11401 acgaattcaa tagcgcacaa aaagagcttt ttgcgattgc gcagaatacg cgcgctagtt
    11461 tggaaagcac cacgcaactt tatattaaat cttctcaggc actgaaagat tacggctacg
    11521 cgcaaaagga tattctcaca tttaccgaaa ccattaacaa agcaatggca gttggcgggg
    11581 ttaagccaca agagcaagct agtgctttac tccaattatc acaggcatta ggttcaggga
    11641 aactgcaagg agatgaattc cgttcaattt cagaagctgc accgattatt ttagatacgc
    11701 ttgccgagta tatgggtaaa agtcgcgatg aagtaagaaa actcgcatcc gagggtaagc
    11761 tcaccgcaga cttactgttc aatgcgttta acggttcaag cgctaaaatt accgaaaaat
    11821 ttaatcaaat gccgctaaca tttggcggtg caatgcagca gttgcagaat gccacattga
    11881 aatttatcgg tgacctagat agtgcaaatg gcttgagtgg aatgttagct caagccatta
    11941 gttttttagc acagaatttt gatgtgttag gcaaggcttt gatttatgca accggtgctt
    12001 atattgcgtt taatgcagtt gcctttgctc agaattttgc aaaagcaacc ggtggtgtcg
    12061 gtttattaag tagtgcattt ggttatttga ctacgatgat ccgaggtgca actgttgcaa
    12121 tgatggctaa tcctatcgag cttttaacaa ctgcaattat tggggctgct tttgtatttg
    12181 atgcttttat cagtgatata gaggtaggtg cagcaacctt tgatgcgact tggggagatg
    12241 ttgcgacagc tgtgtgggat gattttaaag atttaacttc agatgcggca gattggttag
    12301 tcactcaatg ggataaagca accgccagtg cagcgagttc gttcagttcc ttaggtgttg
    12361 atattggctc agtatgggag acggtgcaat ccattacgaa aacattgatc aatagtatta
    12421 ttggtctgtt tgttggagct tatcaagcca tcgtgcttgc ttggaataat tttcctgcca
    12481 caatggaaaa cttgggtgtg atggcggtaa atgctcttgt cgatttggtt caaaaaggca
    12541 tcaatagcat tattcagctt atcaaattac cgattgagct tttaaacaga gcctcatcta
    12601 cttttggtgg aggaaatctg attgatacat caggttggaa ggcaagctta gatgatttta
    12661 aactaaaggc aagccgcgag gcagaagttg ttggtcaatc aattagccaa gcatttgcgg
    12721 atagtatcac cacagattac ataggcaatg cagttaattc agtgagtgac tatattgatg
    12781 gagcggcagt tcgtgggcgc ttaaaacgtc aattagatga aaccgcctct gacgatcaag
    12841 gtacgcagtc accagctaaa aaaacattag ctggaaataa taactctgct agtgactgga
    12901 aaaactacct caatgaactt gaacgagcca atgccgatgg attagcccgt attgcacttg
    12961 agcaagatcg ctcaatgcgt gaaatgttgg aaaaggcgaa gaaagccggt gcaagtcacg
    13021 ctgaaattga aaaagccaaa atgctgatta cagaacgtta tgctaaagag cgaatggaaa
    13081 ttgccgagaa gtatgtgccg agtctgaagt ttgaggaaga actcaaagat cagattaagg
    13141 aaattgatga actgcaaaag ttaaacctga ttaccaccga gcaagcaggt cttgcgaaag
    13201 aggcgttagc aggcaaatat cagccggtag ttgaaatcca acagcaatac atcaatcaac
    13261 tgagagagat tgaagcatta aaacaagccg gtgtattaag caaacctcaa gcagaagtag
    13321 cggccgaaaa agccaaatgg gacgccggca cacaaaaagc caaaatcgca ggtaaaaacg
    13381 ccgttagccc ttatgaaaaa tggaaatcgg aatttgaccc aatgcaggca attcaaaatg
    13441 agcaagcctc aaagttggca gaagtgcaat cgatgtacga tcagcatttg atccaatatg
    13501 aggattttat caacgctaaa gcacaaattg atgctaaggc gactgctgat actcatcaac
    13561 tgtttatgaa cagtattagt gggtttggtt cggcgataga tacgatgtta ggcgtgatga
    13621 aaaacgcagg gcaagagcaa tcaggtattt accgcacgat gtttgcgatg tcgaaagcgt
    13681 ttgctattgc ggaatcaatt ctgaacttga atcgtgcaat tactcaagca atgagcgatc
    13741 aaacagctat tacaccggct caaaaatttg caaatatggc ggctattgct agtgccgggg
    13801 cgagcttgat ttctaatatc cagtcagtct cattaggcgg tatggctcac agcggtattg
    13861 acaatgtgcc gaaagaaggc acttggttgc tggataaagg tgagcgtgta gtggatagtc
    13921 gtactaacca agacttaaaa acctttttat ccaatgctaa tcgtggcggt gcaagtggtc
    13981 aaagatcggc gataaatgtc aaaattatta ataacgggca acccgtagag gcgaaagtca
    14041 gcagtgaaga gactgtagat ggcaatatcc aaatgacggt ggaactgctg aagaaaatgg
    14101 atcaaatcgc cgatcaacgc taccgtagaa atcagttaaa tgatttaaga acaggtggaa
    14161 cattatctaa ataggtgaag tatgccaatt agtatttcta accaaatgaa actagatctt
    14221 gccaaacttg agcaaaatgc aatgctggac ttgtacgagg ttgatttgcg caatctcaaa
    14281 gataaaagtg gtaatgctgg cagagtttac cgcttttatt ctgggctaaa tgaactcaaa
    14341 acaagtatcg tctggcaagg gcggacttac gatccgtatc ctattgaggc aagtggattt
    14401 gaacgaaaca gtagcggccc gagcaatcgc ccgactctca cgctatcaaa tctgtttggt
    14461 ttaattacca gtattgcgaa tcagtttgac gaatgtatcg gtgcgattgt ccgccggcat
    14521 caggtttatg ctcaatattt agatgccgtg aattttgccg ggggtaatgc gaaagctgat
    14581 ccaaatcagg aaataatcag tcattttgtg attgagcagc ttaccagcct cacccgagaa
    14641 acggcgacct ttacgctggc attaccgatt gaaaccgata atgccaa
//
LOCUS       DANLXO010000069        14290 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.069, whole genome shotgun sequence.
ACCESSION   DANLXO010000069 DANLXO010000000
VERSION     DANLXO010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14290
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.069"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(54..1013)
                     /locus_tag="PXD69_001758"
     CDS             complement(54..1013)
                     /locus_tag="PXD69_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6283937.1"
                     /translation="MKFHKTLLVTLLSSLSVAALAQDKIQNVAITAIVEHPALDSIRK
                     GVIEELAREGFVDGKNIKIDYQSAQGSTATAAQIARKFVGDKADIIIPITTPSAQPVV
                     AATRSIPIVFSGVTDPVAAKLVKSWEPSGTNVTGISDHKAMAPQVKLIQTLVPDLKAV
                     GYVYSAGEVNSAIVLEELKQEAQKQGFTIVPVAVQRSADIGTAARSLNGKVQAIYISE
                     DNAVVSAYEALHKAALEAKIPVIAADRDTVQRGAVAAYAVNQYDIGVATGKVAARVLK
                     GEKAGTIPIQEVSKLELSINTKTAKELGITIPEVLIKEAKQTF"
     gene            complement(1210..1617)
                     /locus_tag="PXD69_001759"
     CDS             complement(1210..1617)
                     /locus_tag="PXD69_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HDL6283938.1"
                     /translation="MKPLRPYLYNAYYNWIIDSDNTPYLLVNAEFPDVDVPVEFVKEG
                     KIILNISPRSIGQYIVADEYISFSARFQGMLRDIYIPFGAMVAIYAQETGDGIMFQEE
                     AYYTEEAYQARVRAVEQPKKIKAKKTSTLKLVK"
     gene            complement(1617..2261)
                     /gene="sspA"
                     /locus_tag="PXD69_001760"
     CDS             complement(1617..2261)
                     /gene="sspA"
                     /locus_tag="PXD69_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HDL6283939.1"
                     /translation="MTSSINKRSVMTLFSDKNDIYSHQVRIVLAEKGVPYEIENVMLG
                     SISEDLLELNPYGNIPTLVDRELVLFNPRIIMEYLDERFPHPPLMPVYPVSRGQCRLN
                     MYRIEQDWYSQIDIVNKDPESAEGKKALAQLKEDVLALAPIFAAKPYFMSDDFSLVDC
                     YIAPLLWRMQILGVKFSGATAKPINAYMTRVFQRDSFIQSVGGEAPKHLMDDKD"
     gene            2435..2932
                     /gene="purE"
                     /locus_tag="PXD69_001761"
     CDS             2435..2932
                     /gene="purE"
                     /locus_tag="PXD69_001761"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDL6283940.1"
                     /translation="MPNKAEIAIVMGSKSDWATMSEATQILDQFGLSYHVEVVSAHRT
                     PDKLFSFAETAETNGYKVIIAGAGGAAHLPGMIAAKTIVPVLGVPVKSSMLSGVDSLY
                     SIVQMPKGIPVGTLAIGPAGAANAGLLAAQILAAFNPDIAEKLRIFRQTQTQMVLDNP
                     DPRVE"
     gene            2947..3912
                     /locus_tag="PXD69_001762"
     CDS             2947..3912
                     /locus_tag="PXD69_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDL6283941.1"
                     /translation="MSKKLLILHTGGTISMKEGEDGKVSPSNENPLLAALERLNHPAK
                     LAQESLFNIPSPHINIEHWQQLKMRIEKAVNEENVDGVVITHGTDTLEETSYFLDLAL
                     SVNIPVVITGAMRSSNELGADGLINLQSAILVALNEESRDKGVLVVMNDEIHNAKFVT
                     KTHTTNVATFQTPTFGPCGLVTKESVIFFQKLTTYERYPIQQVTKANVQLLKAYAGMD
                     SFLLEQLAKSKCDGVVIEALGAGNLPPSCLAGIEALVNANIPIVIVSRAFNGITQDVY
                     DYVGGGKQLKQKGIIFTKGLSGQKARIKLMVLLSQTLDKPLSDYF"
     gene            3931..5019
                     /gene="purK"
                     /locus_tag="PXD69_001763"
     CDS             3931..5019
                     /gene="purK"
                     /locus_tag="PXD69_001763"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDL6283942.1"
                     /translation="MQKSAIYPPVYVLGNGQLGRMLRYAGAPLDIEVKPLAFDAPVFD
                     IEPNSIITAEIERWADTPLTQLLGNHPNFVNLNVFGKLADRFTQKSLLDELHLATSKW
                     QLLENAEHWQDIFQHIGEKVVVKRRTGGYDGRGQWIVTQDSIHQITPELFGEVIAEKF
                     IPFEGEISIVGARFRDGSTRFYPISHNLQQNGILRYSVSDVNLPNQALYQQQAEQMLA
                     TVMQKLEYVGVMAMECFVVGDKLLINELAPRVHNSGHWTQLGCAISQFELHLRALLDL
                     PTPALDQIAPSVMVNLIGIEHNKQWLSLPFSQLHWYGKEVRAGRKVGHINLTHTDKNG
                     LIELLEQLRPSLTEDFHSGLDWAINKLK"
     gene            complement(5240..5650)
                     /locus_tag="PXD69_001764"
     CDS             complement(5240..5650)
                     /locus_tag="PXD69_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283943.1"
                     /translation="MISRSLFSKLILFAKIVIFSQLVFMVVIWIAHHIMREYSNPFER
                     FGTLFNNVFLTFIIPMMVSSAVIVYKGYTQKNEDKVFWIYMGFFLIWILGFIYFEPAV
                     YDKSLKISGAGFGAMLSIIICSKLLPKETNKEQL"
     gene            complement(5653..7671)
                     /gene="uvrB"
                     /locus_tag="PXD69_001765"
     CDS             complement(5653..7671)
                     /gene="uvrB"
                     /locus_tag="PXD69_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HDL6283944.1"
                     /translation="MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVT
                     GSGKTFTIANVIAKLNRPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPE
                     AYVPASDTFIEKDASINEQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQM
                     MLHLQVGAMIGQREILSRLAELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVE
                     LFDDEIENLSLFDPLTGHSLGKVPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTY
                     FIKENKLLEEQRIAQRTQFDIEMMNELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPA
                     DGILVIDESHVTVPQIGGMYRGDRARKETLVQYGFRLPSALDNRPLRFEEFERLSPQT
                     IYVSATPGAYELEKNPDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIHKRVAVDER
                     VLVTTLTKKMAEDLTDYLDEHGVRVRYLHSDIDTVERVEIIHDLRMGMFDVLVGINLL
                     REGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYGDRITNSMQKA
                     ITETERRREKQMKYNEEHGITPQALNKKVGELLDIGQSDKPKRGKQAVKKAENSATDY
                     KPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRDKLQHLKAYLLEV"
     gene            complement(7910..8146)
                     /locus_tag="PXD69_001766"
     CDS             complement(7910..8146)
                     /locus_tag="PXD69_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL6283945.1"
                     /translation="MSRTTSVTLAEPLSQFVNQMVESGRYGSTNEVISAALKILEAQE
                     QQLIQLRALIDEGLESGVSEETVQSIISKAKRNV"
     gene            8309..9154
                     /locus_tag="PXD69_001767"
     CDS             8309..9154
                     /locus_tag="PXD69_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EfeM/EfeO family lipoprotein"
                     /protein_id="HDL6283946.1"
                     /translation="MFLLKGNFYAFNQTCFCTFALSGFFVATQAAALDLTKETEAYKQ
                     FVVEQIDQLVTDTEKFVGYLNKGDVQKAKKIYPLARMYFERSEPIAESFGDLDPRIDA
                     RLADLAEEGKTEKDWSGFHKIEKVLWQKNTTKGTKATAEQLLKDVKELRAKIPTAEVT
                     PEPMITGAVDLLNEVSTTKVTGEEEIFSKTDLYDFKANIEGAEKIYEIFKTQLEQIDA
                     KLSTEIGSRFAAVNALLAKHNKSKTGYDYVPYNKLSKADIKALAEAVNQLGEPLAQLG
                     VLLNK"
     gene            9165..10361
                     /gene="efeB"
                     /locus_tag="PXD69_001768"
     CDS             9165..10361
                     /gene="efeB"
                     /locus_tag="PXD69_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDL6283947.1"
                     /translation="MMAETTSRRDFLKHTALVGAGLLSAPAFALESRQISEKSQNQYD
                     FYGKHQAGIVSPAQKHIYFLVLDLDTTDIAKVKTLFQNWTEYSRNLTLGKNVKPYSAN
                     AYVPPADTGEADSLSAQNLTLTFGVSANFFTKLGIEKHKPKELNDLPHFPRDQLQAEY
                     TGGDICIQACADDPQVAFHAVRNLVRVARGEIKMKWSQMGFNSFANQDTPRNLFGFKD
                     GTANAESLKDQENTVWVQQEGWLKGGSYLAVRRVKMFLETWDRTHLQSQEETFGRHRD
                     SGAGIGHQHEFDKLDLAKKDEKGNAVIPEVSHAHLANKTGLKILRRSFSYSSGIDDKG
                     QFDSGLLFVSFQQSPEQFIKIQNALGNVDKMNEYITHIGSGLFACFAGVKDENDYLGK
                     ALFDLI"
     gene            10372..10991
                     /locus_tag="PXD69_001769"
                     /pseudo
     CDS             10372..10991
                     /locus_tag="PXD69_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596976.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+/Pb2+ permease"
     gene            complement(11027..11845)
                     /locus_tag="PXD69_001770"
     CDS             complement(11027..11845)
                     /locus_tag="PXD69_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HDL6283948.1"
                     /translation="MKYDLHAHSTASDGVLSPTELVQRAVEQGVTMLALTDHDTISGI
                     QEAKNFAQNQPLELISGVEISILWQEKSIHLAALNIDENNEELVKFLDNQAQLREERA
                     VEIGEKLAKVGIANAYEGAKALATGEVTRAHYGRFLYEQGYVRNIEHAFKRYLGMGKP
                     AYVKPRWSSLEDAVNVTHTSGGVISIAHPLRYKMTARWIRRLIADFKQAGGDGIEVSG
                     CGQTPDQRQLLARWAKEFDLYGSVGSDFHYPTGWIELGKSLELPQECKPIWTLF"
     gene            complement(11857..12456)
                     /locus_tag="PXD69_001771"
     CDS             complement(11857..12456)
                     /locus_tag="PXD69_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HDL6283949.1"
                     /translation="MTMDNLPLEQHPFDPILPEQATVVMVGTFPPTSEKRCMEFHYPN
                     FQNDMWRIMGNIFYADPNYFRVGEEKRFDPIRIEAFLREKGVALCSSAKTAIRLKGNA
                     SDKDLKIVDPIDMDELLLKLPKLKWLFTTGGLATDTLLGLLPEKHKAPKTNEWVVYPY
                     SATRELYLYRLPSTSRAYPLSLANKTEAYRQFFRTAGLI"
     gene            complement(12453..14000)
                     /gene="sbcB"
                     /locus_tag="PXD69_001772"
     CDS             complement(12453..14000)
                     /gene="sbcB"
                     /locus_tag="PXD69_001772"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HDL6283950.1"
                     /translation="MSDKFSFFFYDYESFGVSPALDRPAQFAGIRTDADFNIIGEPVM
                     FFCKQTPDYLPSPEAVMVTGITPQQCNAEGVSEPEFAARIHAEFSRANTCTIGYNNIR
                     YDDEMTRYTFFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSF
                     KLENLTKANGIAHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLID
                     TGEMTPLVHVSGMLGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLR
                     QRLYTKRDELAENELPVPLKLVHINKCPILAPAKTLLPENAERLGIDRALCLENLKTL
                     KAQKSLIREKVIEIFNEERTFEPSTNVETTLYDGFFSPADKNNMAILRTLPPEDLANH
                     GLKFEDPRVEALLFHYRARHYPQTLSRAEQIKWQKHCNQQIEAKAAQFAQSIDDLFQQ
                     HHDNPEKVKLLENLTAYAEQISQQQAVIYRQNVAKDEKLLSELNRVAEQPLDKTEKLK
                     MLKELIK"
BASE COUNT         4209 a         3105 c         2875 g         4101 t
ORIGIN      
        1 gaatttttac tctacaagat tatgacaaat aaaacaaatt tttatttttt acactaaaaa
       61 gtttgtttag cttctttgat taatacctct ggtatagtaa tgcccaattc ttttgccgtt
      121 ttagtattaa ttgaaagctc taatttgctg acttcttgga ttggaattgt acctgctttt
      181 tcccctttta atacacgagc agcaacttta ccggttgcca caccaatatc atattgatta
      241 accgcataag ctgccactgc accacgttgt actgtatcac ggtcagcagc aatcaccgga
      301 atttttgctt ctaaagccgc tttatgtaag gcttcataag ccgaaacaac tgcattatct
      361 tcagaaatat aaatagcctg cacttttccg tttaggctgc gagcagcagt gccaatatcg
      421 gcactgcgtt gaacagcaac cggcactata gtaaagccct gtttttgagc ctcttgtttt
      481 aactcttcta acacaatcgc agaattaact tcacctgcac tatacacata accaacagct
      541 ttcaaatccg gtactaatgt ttgaattaat ttcacttgtg gagccatcgc tttgtggtct
      601 gaaatccccg tcacgttagt gccacttggc tcccacgatt ttactaattt tgcagcaacc
      661 gggtctgtca cgcctgaaaa cacaattggg atagaacgtg ttgcagcaac aacaggttgt
      721 gccgaaggtg tggtgatcgg gataataata tctgctttat ccccaacaaa tttacgcgca
      781 atttgtgctg ctgttgcagt actaccctgt gcagactgat agtcgatttt aatgttttta
      841 ccatcaacaa acccttctcg ggctaattct tcaatcacac ctttacgaat tgaatctaat
      901 gcagggtgtt ccacaatcgc tgtaattgct acattttgaa ttttatcttg agctaatgcc
      961 gctacagaaa gtgaacttaa caaagtcact aataaggttt tatggaattt cattttctct
     1021 ccttaagatc attactgtac tatcacaaca gtacaaacac aaaacaaaga taagcaattt
     1081 ttagtcggag tgcaagtgga atttgattat ttccgtcaca aaacaaacaa gcggttaaat
     1141 tttgactgat atttgcaaat aatcagaaaa atttaaccgc ttgtaatgtg ttttgatgaa
     1201 atagatctct tatttcacca actttaaggt agatgttttc ttcgccttga tttttttagg
     1261 ctgctctact gctctaactc gagcttgata agcctcttca gtgtagtagg cttcttcttg
     1321 gaacataata ccatcaccgg tttcttgcgc ataaatcgcc accattgccc caaaaggaat
     1381 ataaatatct cttaacattc cctgaaaacg agcgctaaag ctaatgtatt catcagccac
     1441 aatatactgc ccgatggaac gaggcgaaat atttaaaata atcttccctt ctttgacaaa
     1501 ctctaccggc acatctacgt ctggaaattc tgcattcact aataagtaag gcgtgttatc
     1561 gctatcaata atccagttat agtaggcatt ataaagataa ggtcttaatg gtttcattag
     1621 tctttatcgt ccattaaatg ttttggcgct tcgccgccaa cagactggat aaaactatca
     1681 cgttggaata cacgggtcat atacgcatta attggttttg ccgttgcacc gctgaattta
     1741 acgcctaaga tttgcatacg ccataataac ggtgcaatat agcaatcaac caagctgaaa
     1801 tcatcgctca taaaataagg tttagcggca aaaataggcg ctaatgccaa tacatcttct
     1861 ttaagctgtg ctaacgcttt cttgccttcc gctgattcag gatctttatt cacaatatca
     1921 atttgcgaat accaatcttg ttcaatacga tacatattta aacggcactg accacgagaa
     1981 acagggtaaa ccggcattaa tggtgggtga gggaaacgct catctaaata ttccataata
     2041 atacgagggt taaacagcac taattcacga tcaaccaatg taggaatatt accgtaagga
     2101 ttcaattcta ataaatcttc agaaatactg cctagcataa cgttctctat ttcataaggc
     2161 accccttttt ctgctaacac aatacgcact tggtggctgt aaatatcatt tttatccgaa
     2221 aaaagagtca ttaccgaacg tttgtttata ctactcgtca tttatatctc cgatgattaa
     2281 atttataaaa aataaaatgg ttgtcgatta tatcatattt taaccagcag ataacagccc
     2341 taaaaattgc ttttcacttc ttaaatagct acgcaaacgt ttgctttgta tgctatgatt
     2401 acactgtttt acattagtat cataaggatt taaaatgcca aataaagctg aaattgcgat
     2461 cgtaatggga tctaagagtg attgggctac aatgtctgaa gcaacccaaa tattagacca
     2521 gttcggtttg agctatcacg ttgaagtcgt ctcagcacac cgcacaccgg acaaactctt
     2581 ttcttttgct gaaactgcag agactaacgg ctataaagtg attattgccg gagccggcgg
     2641 tgcagctcac ttgcccggaa tgatcgctgc taaaaccatt gtgccggtgt taggtgtgcc
     2701 ggtaaaaagc tcaatgttaa gtggtgtaga tagcctctat tcgattgtgc aaatgccgaa
     2761 aggtattccg gtcggtacgc tcgcaatcgg gccggcaggt gcagcaaatg caggcttatt
     2821 agccgctcaa attttagcag cctttaaccc tgatattgca gagaaactgc gtattttccg
     2881 tcaaacccaa actcagatgg tattagataa tcctgatcct cgtgttgaat aactattgta
     2941 taaaagatgt ctaaaaaatt attaatcctc cacactggtg gtactatttc aatgaaagaa
     3001 ggggaagacg gtaaggtctc cccttccaat gaaaatcctc tcttggctgc cttagaacgt
     3061 ttaaaccacc cagcaaaatt ggcgcaagaa tcgttattta atattccctc tccgcatatc
     3121 aatatcgagc attggcaaca gttaaaaatg cggattgaaa aggcagtgaa tgaggagaat
     3181 gtcgatggcg tagtaatcac ccacggcaca gataccttgg aagaaacctc ctattttctg
     3241 gatttagccc tcagcgtaaa tataccggta gtaattaccg gagcaatgcg ttccagtaac
     3301 gaactgggtg ctgatggctt aatcaatcta caaagtgcga ttttagtggc gttaaatgaa
     3361 gaaagccgag ataaaggcgt gttagtggtg atgaatgatg aaatccacaa tgctaaattt
     3421 gtgaccaaaa cccacaccac taatgtggcg actttccaaa ccccaacctt tgggccttgt
     3481 ggcttagtaa cgaaagaatc tgtcattttt ttccaaaaat tgaccactta cgaacgttat
     3541 ccaattcaac aagtaactaa agctaacgtg caactactga aagcatacgc cggaatggat
     3601 agttttctgc tggaacaatt agcgaaaagc aaatgcgatg gtgttgtgat tgaggcattg
     3661 ggtgcaggta atttaccccc tagttgtctg gctggtattg aggctttagt gaatgccaat
     3721 attccaattg taattgtttc tcgggcattc aatggtatta cccaagatgt ctatgattat
     3781 gtaggcggtg gaaaacagtt aaagcaaaaa ggcattattt ttaccaaagg cttaagtggg
     3841 caaaaagctc gcattaaact tatggtctta ctcagccaaa ccttagacaa accactatca
     3901 gactatttct aacccattga gaataccacg atgcaaaaaa gtgcaatcta cccacctgtg
     3961 tatgtattag gcaacggcca gctcgggaga atgctacgct acgccggagc accacttgat
     4021 attgaagtca aaccgctggc tttcgatgcc cctgtgtttg atattgagcc aaacagcatt
     4081 attaccgcag aaatcgaacg ttgggcagat acgcctttaa cgcaattact cggtaaccac
     4141 ccgaattttg tgaacctgaa tgtttttggg aagttagccg atcgttttac gcaaaaatca
     4201 ctacttgatg aactccatct tgcgacttca aaatggcaac tgctagaaaa tgccgaacat
     4261 tggcaagata tttttcagca tattggcgaa aaagtagtgg ttaaacgccg aaccggagga
     4321 tatgacggac gtgggcaatg gattgtaacg caagactcga ttcatcaaat tacacctgaa
     4381 ttatttggcg aagtgattgc cgaaaaattt atcccgtttg agggggaaat ttccattgtt
     4441 ggggcgagat tccgtgacgg ctcaacccgt ttctacccta tttctcacaa tttacaacaa
     4501 aacggcattc tacgttactc cgtctccgat gtgaatttac cgaaccaagc cctctaccag
     4561 cagcaagccg aacagatgct cgctacggta atgcaaaaat tagagtatgt cggcgtaatg
     4621 gcaatggaat gctttgttgt gggcgacaag ctactcatca acgagcttgc ccctcgagtg
     4681 cataacagcg gacactggac acaactcggc tgtgccatta gccaatttga gttacattta
     4741 cgggcattat tagatctacc tacgccagca ctcgaccaaa ttgccccaag cgtgatggtt
     4801 aatttaatag gcattgaaca taacaagcag tggctaagcc tcccatttag ccaactacat
     4861 tggtatggca aagaagtccg agctggtaga aaagttgggc atatcaacct cactcacacc
     4921 gataaaaacg gcttaattga actactggaa caactcagac cgagcctaac ggaagatttc
     4981 cattcgggat tagattgggc aatcaataag ctcaagtaag cggtcggatt ttgtaacttt
     5041 tttgcaaatc tgtttacccg atggtgcgag cttcctcgct cgtaccaaac aagcggtcga
     5101 cttagtgcta aaatttgcaa aataattcaa cataatggct acttccggtc atcatcttga
     5161 tctgaaaacc cctcagggtg gatatggcta tcaaaaagca ttttcttcct ccgagaaaac
     5221 agatttcttc acaagaatct tagagctgct ctttatttgt ttccttaggc aataacttcg
     5281 agcaaatgat aatagagagc atagccccaa atcctgcacc tgaaatcttc agtgatttat
     5341 cataaactgc cggctcaaaa taaataaatc ccaaaatcca aattaaaaag aaccccatat
     5401 aaatccaaaa cactttatct tcatttttct gggtataacc tttataaaca ataaccgcac
     5461 tacttaccat catcggaata ataaaagtca aaaacacatt attgaacagg gtaccaaatc
     5521 gttcaaacgg attactgtac tcccgcataa tatggtgggc aatccagata accaccataa
     5581 aaacaagttg agagaaaata acaattttgg caaataagat taattttgaa aataatgaac
     5641 gagaaatcat atttaaacct ccaacaaata cgcctttaaa tgctgcaact tatcccttac
     5701 cgcagccgct ttttcaaatt ccagatcttt cgcaaaatca cgcatttgtt gttccagcgt
     5761 tttaagctct ttttccagtt ctttacggga tttcggcttg tagtcggttg cagaattttc
     5821 ggcttttttg accgcttgtt tgccccgttt tggcttgtcg gattgtccga tgtcgagcaa
     5881 ttcacccact tttttgttca acgcttgtgg cgtgatgccg tgttcttcgt tgtatttcat
     5941 ctgcttttca cggcggcgtt cggtctcagt aattgctttt tgcattgagt tggtaatgcg
     6001 gtcgccgtat aaaatcgctt ttccgttgag gtttcgggcg gcacgtccga tggtctgaat
     6061 taacgagcgt tcggaacgta aaaatccctc tttatccgca tcaagaatgg caaccagcga
     6121 cacttcgggc atatctaagc cctcacgcaa taagttgatc cccaccagca catcaaacat
     6181 tcccattcgt aaatcgtgga taatttcgac ccgttccacc gtgtcaatgt cgctatgtag
     6241 ataacgaact cgtacgccat gttcgtccaa ataatcggtg agatcttccg ccattttttt
     6301 ggtgagtgtt gtcaccagca cccgttcgtc caccgccact cgtttgtgaa tttcagacag
     6361 taaatcgtcc acctgcgtag caacggggcg aacttcgata atcggatcga gcaagccggt
     6421 tggacgaact acttgatcca ccacatcggg atttttctcc aattcatacg cccccggtgt
     6481 ggcagaaacg taaatcgtct gtggtgaaag acgttcaaac tcttcaaatc tcaacgggcg
     6541 gttatccagt gcagacggca gacggaaacc gtattgcacc aatgtttctt ttctcgctcg
     6601 gtcgcctcga tacattccgc caatttgtgg cacagtaacg tggctttcat caatcaccaa
     6661 aataccgtcc gccggcatat aatcaaacag ggtcggaggg gcttcgccct cttttctgcc
     6721 cgagagatag cgtgagtagt tttcaatgcc cgaacagtag cccagctcgt tcatcatctc
     6781 aatatcaaac tgcgtacgtt gggcgatccg ctgctcttcc agcaatttat tctctttgat
     6841 gaaataggtg cgacggtcgg caagctcgac cttaatttgc tcgattgcct ccaaaatccg
     6901 ttcccgaggg gtcacatagt gagttttcgg gtaaatggta tagcgaggca ccttgcccaa
     6961 gctatgccct gtaagcggat caaacagcga cagattttcg atttcatcgt caaacagctc
     7021 tacccttaac gctacttcat cgctttcggc agggtaaata tcaatcacat cgccccgcac
     7081 tcggaaagtc gaacgttgga acgcctgatc gttgcgagta tattgcaatt cggcaaggcg
     7141 agagagaatt tcacgctgcc caatcatcgc ccccacttgc aaatgcaaca tcatctgcat
     7201 ataagcgtcc acatcaccca agccgtaaat ggcagaaacg gacgccacta caatcgtatc
     7261 tcggcgttcc aaaaaggatt tggttgcgga aagtcgcatt tgctcgatct gctcattgat
     7321 agaggcatct ttctcgataa aggtatcgct tgccggcaca taggcttcgg gctggtagta
     7381 atcatagtaa gagacgaaat actccaccgc attttccgga aagaacgctt tcatctcggc
     7441 ataaagctgg gcggcaaggg ttttattcgg ggcaagcacc atcgccgggc gattgagctt
     7501 ggcaatcaca ttagcaatgg taaaggtttt ccccgagccg gttacgccaa gtaaggtttg
     7561 atgtgccaag ccgtcattta agccttcggt caatttggca atcgcacttg gttggtcgcc
     7621 ggagggcttg aaaggagaat ggaggataaa gggtttgcct tgcttgctca tagaaaatcc
     7681 tgtcttaaaa aatcggttta ttttagcaca agcaagcggt cgtttttatc gggatttttg
     7741 caaatttatt gtaactgctt atattgatcc attcttggat ctaacaccct aacaataaag
     7801 ataccttttg ggattggttt ataataaata gaatgtgagc ggtggtaatg acagcgtaac
     7861 aaagggcgaa taaagtaacg ctaaatctcg ctctgcccta acagaaagtt tatacattac
     7921 gttttgcctt gctgataata gattgaacgg tttcctcaga aacaccgctt tctaagcctt
     7981 catcaattaa ggctcttagc tgaattagtt gctgttcttg tgcttccaat atttttaatg
     8041 cggcactgat gacctcgttg gtcgaaccat aacgcccact ttcaaccatt tggttcacaa
     8101 attggcttaa tggctcagct aaagttacgc tggttgttct actcattact attcctatct
     8161 tattgattat tgagcagatt gtaatggctc taatttagat aagcaagcgg tctattttta
     8221 gcaataattt gcaaaacaaa atgtgattta catcacaaaa tcagcattat tttttgcgaa
     8281 taattcgcaa taaggatatt atgtcgcaat atttttatta aaaggaaatt tctatgcgtt
     8341 taaccaaact tgcttttgca cttttgcact ttctggcttt tttgtggcta ctcaagcggc
     8401 agctttagac ttaactaagg aaaccgaggc ttataaacaa tttgtggtag aacagattga
     8461 ccaactggtt accgatacgg aaaaatttgt cggctactta aacaaaggcg atgtgcaaaa
     8521 agcgaagaaa atttacccgc ttgcaagaat gtattttgaa cgttctgaac cgattgcaga
     8581 aagttttggc gatttagacc ctcgtattga tgcccgtctg gcagatttag ccgaagaagg
     8641 taaaaccgag aaagattggt caggtttcca taaaatcgag aaagtattgt ggcagaaaaa
     8701 caccactaaa ggcacaaaag caacggcaga acaattatta aaagatgtaa aagagctgcg
     8761 tgcgaaaatt cccactgcag aagttacccc tgagccgatg attaccggtg cggtagattt
     8821 attaaacgaa gtttctacta ctaaagtaac cggtgaagaa gaaattttct ctaaaaccga
     8881 cctttacgat tttaaagcca atattgaagg tgcagaaaaa atctatgaga tttttaaaac
     8941 gcaattagag caaattgatg ccaaactctc aacagaaatc ggctctcgtt ttgcggctgt
     9001 caatgcgctg ttagcaaaac acaataaatc taaaaccggt tatgattatg tgccttataa
     9061 caaactgtca aaagcggata ttaaagcgtt agcagaggct gtaaaccaat taggcgagcc
     9121 gttagctcaa cttggcgtac ttttaaataa atagtggagc aaaaatgatg gcagaaacca
     9181 cttctcgccg tgatttttta aaacataccg cattagtagg agcaggctta ttgtctgctc
     9241 ctgctttcgc tttggaatca cgacaaatat ctgaaaaatc tcaaaatcaa tacgactttt
     9301 acggcaaaca tcaagctggt attgttagcc ctgcacaaaa acatatctac tttttagtgc
     9361 tggatttaga caccactgac attgccaaag taaaaacatt gtttcaaaac tggacggaat
     9421 atagccgtaa cctcacgctt ggcaaaaatg tgaaacctta tagtgctaat gcttatgttc
     9481 caccggcgga taccggtgag gcagatagcc tttcggcaca gaatctcact cttacttttg
     9541 gcgtcagtgc caatttcttt acaaagctcg gcattgaaaa acataagccg aaagaactga
     9601 atgatttacc gcatttccct cgtgatcaac tacaagcaga atacaccggt ggcgatattt
     9661 gcattcaagc ctgtgcagac gatccgcaag tggctttcca cgctgtgcgt aatttggtgc
     9721 gtgttgcccg tggtgaaatc aaaatgaaat ggtcgcaaat ggggtttaac tcctttgcca
     9781 atcaagacac acctcgtaac ttattcggtt ttaaagacgg cactgccaac gcagaaagtt
     9841 taaaagatca ggaaaatacg gtatgggtgc aacaagaggg ctggctcaaa ggcggttctt
     9901 atttagccgt tcgccgtgtt aaaatgttct tggaaacttg ggatcgcacc catctccaat
     9961 cccaagaaga aaccttcggt cgtcaccgtg attccggagc cggaatcggg catcagcacg
    10021 aatttgataa attagattta gccaaaaaag acgaaaaagg caatgcagta attccggaag
    10081 tttcacacgc tcatcttgcc aataaaacgg ggctgaaaat cctacgccgt tcattctcct
    10141 attcaagcgg tattgatgat aaagggcaat ttgattcagg gttgttgttt gtctctttcc
    10201 aacaaagtcc ggagcaattt atcaaaatcc agaacgctct cggcaatgtg gataaaatga
    10261 atgaatacat cactcatatc ggcagtggtt tatttgcctg ttttgccggt gtgaaagatg
    10321 aaaatgacta ccttggcaaa gcgttgtttg atttaattta gggaaaagga aatgaaatta
    10381 aaagcattag tgctaattcc gttactcttt tcgagtacag gattgcttgc caaagtgaat
    10441 gtcagcccct tatttgttca gctttccgat gcaatggcag agagtaaaaa aggggaattt
    10501 gcaaaatcca gccaaaattt gaccgcttta cagcacgatt ttgagcagat tagccagcac
    10561 gattccctcg ccggagttga agtacagacc gctctgaaaa aagcgattga aacacccaat
    10621 gctgaaaact tagagagcct ttctaaaaac tctatgcgtt tgaaaaagaa caaaacccta
    10681 gcggttatgc tgaaaaacat caggattttg tggcaaaaat gacgccgctt tatgcagaac
    10741 ttgctcaaac cgtgccaact caagaaatcg ccaaaatcaa atgggcggct tatcagtttg
    10801 gtaagaattg ggtaaaacag gaaaaagcag tacgggaaat cagtcttccc cattatggca
    10861 aatttgagcg tattcttggt ttaatgcgaa ttaatctgaa cgctgaaaag ccggatatgg
    10921 caaaaatcag tgaactggtt tccgaactag gtgtggtaat ggcagacttt aagcaagtta
    10981 aagtgaaata gtaaaaaatc ggggcaaatt atttgccccg ataacactaa aataacgtcc
    11041 aaatcggttt acattcttgg ggtaattcca aacttttacc gagctcaatc cagccagttg
    11101 ggtagtggaa atcagaaccg accgagccat ataaatcaaa ctcttttgcc caacgggcaa
    11161 gtaattgccg ttgatcaggt gtttgtccgc agcctgatac ttcaatgcca tcgcctccgg
    11221 cttgtttgaa atctgcgatt aaacggcgaa tccaacgagc agtcatttta tagcgtagcg
    11281 ggtgagcaat cgaaatcaca ccgcctgagg tgtgggtaac attcaccgcg tcttctaaac
    11341 tactccatct cggtttcaca taggcaggtt tccccattcc cagataacgc ttaaaggcgt
    11401 gttcaatatt gcggacatag ccttgttcat acaaaaaacg cccataatgt gcccgagtta
    11461 cttcccctgt tgccaacgct tttgccccct cataggcatt tgcaatcccg acttttgcta
    11521 atttttcacc aatttcgacc gctctctctt cccttaattg ggcttggtta tccaaaaact
    11581 tcaccagctc ctcgttgttt tcatcaatat tcaacgccgc aagatgaata cttttttctt
    11641 gccataaaat cgaaatttcc accccagaga taagctcaag cggttgattt tgggcaaaat
    11701 ttttcgcttc ttgaatgccc gaaatcgtat cgtgatcagt taaagctagc attgttaccc
    11761 cttgctctac cgcacgttgt accaattcag tgggagaaag tacgccatca gaggcggtac
    11821 tgtgggcgtg taaatcatat ttcattttat ttatccttaa attaagccgg cagtcctgaa
    11881 aaattggcga taggcttcgg ttttgttggc taagctgagt ggataagccc tcgacgtcga
    11941 aggcaggcga tataaataaa gttctcttgt ggcggaataa ggatagacca cccattcgtt
    12001 ggttttcgga gctttgtgtt tttccggcaa taaaccgagc aacgtatcgg ttgccaaacc
    12061 acctgtggta aatagccatt tcagtttggg taatttgagc aacagttcgt ccatatcgat
    12121 aggatcaaca atttttaaat ctttatctga agcgtttcct tttaaacgaa tcgctgtttt
    12181 tgccgaagaa cagagcgcaa cgcccttttc tcgcaaaaac gcctcaatcc gaatcggatc
    12241 aaagcgtttt tcttcaccaa ctcgaaaata gttagggtca gcataaaaaa tattgcccat
    12301 aattcgccac atatcatttt gaaaattcgg gtaatgaaat tccatacaac gcttttccga
    12361 tgtaggtgga aaagtgccga ccattaccac cgttgcttgt tcaggtaaaa tagggtcaaa
    12421 cgggtgctgt tctagcggta aattatccat tgtcatttaa tcaactcttt taacatcttg
    12481 agcttttcgg ttttatctag gggctgttcc gctactctgt taagctcgct cagcaatttt
    12541 tcatcttttg caacattttg acgataaatg accgcttgtt gttgcgaaat ctgctcggcg
    12601 taagcggtca aattttctaa taattttacc ttttccgggt tgtcgtgatg ttgttggaac
    12661 aagtcgtcaa tcgattgggc gaactgcgct gcttttgcct caatttgctg gttgcaatgt
    12721 ttctgccatt tgatctgctc ggctcgactg agtgtttgtg gatagtgcct tgctcggtaa
    12781 tggaatagta acgcctctac tcgagggtct tcaaatttca agccgtggtt ggctaaatct
    12841 tcaggcggta gcgtgcgtaa aatcgccata ttatttttat ccgcaggcga gaaaaagccg
    12901 tcatacaaag tggtttctac attggtcgaa ggctcaaacg tgcgttcttc attaaaaatt
    12961 tcaatcactt tttcccgaat cagcgatttc tgtgctttta aagttttcaa attttccaaa
    13021 cataaagctc tgtctatgcc taaacgttct gcattttcag gcagtaaggt ttttgccggt
    13081 gctaaaatcg ggcatttatt aatatgcact aattttaacg gcacaggtaa ctcattttcg
    13141 gctaattcat ctcgtttggt gtataaacgc tgacgtaaaa cctctgcatt ttcagtcaat
    13201 aagccattca tatcgcccga taaatcacac acaattacgg cattttgatt agttgagtgc
    13261 caagccagtg gcacaaccca agcggtattt cctcgatagt tgcccagcat accggaaacg
    13321 tgcacaagcg gtgtcatttc accagtgtca attaacttct ctacttcttt tttactgcgt
    13381 aaattaaaga aaaaatcgaa caactttggc tgtttttgct taattaattt tgccattgcg
    13441 atggtggcat acacatcaga catcgcatcg tgtgcatttt catgggcaat gccattggct
    13501 ttggtgaggt tttccaattt aaaacttggc ataccggttt catctgttgg ccattcaata
    13561 ccatcaggtc ttaacgcata acaggcacgg actaaatcta acaagtccca acgagaattt
    13621 ccgtttttcc agctatattc gtaaggatcg taaaaattgc ggaagaaggt ataacgggtc
    13681 atctcatcat cataacgaat attgttataa ccgatagtac aagtattcgc tcggctaaat
    13741 tcagcgtgaa ttcgggctgc aaattccggc tcagatacac cttcagcgtt acattgttgc
    13801 ggtgtaatcc cggtaaccat caccgcttcg gggctgggta aataatccgg cgtttgctta
    13861 caaaaaaaca ttaccggttc accgataata ttaaaatccg catcggttcg aataccggca
    13921 aattgtgccg gacgatctaa cgccggactc acgccgaaac tttcataatc gtaaaagaaa
    13981 aaagagaatt tatcgctcat tcgttcaatt tgttagaaaa aattgggctg attgtagcac
    14041 agtaaggcag aaaggaggga atacaagcgg tcaatttccg ttagaaattt gcaaatgcta
    14101 aaataaaaaa agcccctaat caaaaaagcg aaaaggggcg gaggtcttac ctaatgataa
    14161 tattattttt ataaatcaat tagttaagat gtttttgtcg taaaaatatc gagattatta
    14221 aaaacaccta caataaagca atacctcagc actcgaagag taagaccgtc tttgcgggat
    14281 aggggtaaca
//
LOCUS       DANLXO010000070        14176 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.070, whole genome shotgun sequence.
ACCESSION   DANLXO010000070 DANLXO010000000
VERSION     DANLXO010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14176
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.070"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            103..1995
                     /gene="mnmG"
                     /locus_tag="PXD69_001773"
     CDS             103..1995
                     /gene="mnmG"
                     /locus_tag="PXD69_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDL6283951.1"
                     /translation="MIYNQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQ
                     MSCNPAIGGIGKGHLVKEIDAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRV
                     LYRNAVRTALENQPNLDIFQQEVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLA
                     GKIHIGLDNYAGGRAGDPAATMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQ
                     HGDEVLPVFSFMGDVSQHPRQIPCYITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRY
                     CPSIEDKVMRFADRNSHQIYLEPEGLNTIEVYPNGISTSLPFDVQMGIVNSMKGLENT
                     RIIKPGYAIEYDYFDPRDLKPTLETKAIDGLFFAGQINGTTGYEEAGAQGLLAGINAA
                     LQVQGKEAWYPTRDQAYTGVLVDDLCTLGTKEPYRVFTSRAEYRLLLREDNADIRLTP
                     KAHELGLIDEARWVRFNQKMEAIEQERARLKSTWAHLQMPNLDELNALLANPLAREAS
                     GEDLIRRPEMSYEKLTQIALFAPAIEDKQVAEQVEIAIKYQGYIEHQYNEIERHKRHE
                     NTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQASRISGITPAAISILLVNLKKQGM
                     LKRGEL"
     gene            2090..2314
                     /locus_tag="PXD69_001774"
     CDS             2090..2314
                     /locus_tag="PXD69_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283952.1"
                     /translation="MIYLRKLGFSPFDHQMFAQPSWYFCNALVHTNYENLRQGVFVTK
                     AYLVMFLENLLFEKSHSLSNRALRINENND"
     gene            2327..2941
                     /gene="rsmG"
                     /locus_tag="PXD69_001775"
     CDS             2327..2941
                     /gene="rsmG"
                     /locus_tag="PXD69_001775"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDL6283953.1"
                     /translation="MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVR
                     NPDEMLVKHILDSLVVSRHLQGETFIDVGTGPGLPGIPLAIANPDKQFVLLDSLGKRI
                     TFIKNALRELGIKNVTPVQSRVEEYTESQFDGVLSRAFASLNDMIDWCYHLPTENGKF
                     YALKGVYDEQEIIEIKQPIQLVEVIKLEVPELVGERHLVVLKKP"
     gene            3209..4657
                     /locus_tag="PXD69_001776"
     CDS             3209..4657
                     /locus_tag="PXD69_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283954.1"
                     /translation="MNRVTNKADEFAKLSTFERIAYGSGDLAQNLVFGTVGGFLLTYL
                     TTVNGISAVAGATIFLIVKWGNVFWDPFVGAFIDKSKPSAQGKYRPYLLKFGIPLVVL
                     ASLLFLPLESVRGSVIYAFLSYFATAMVYSFVNIPYGSLSASLTRDTDEIAKLTTTRM
                     TMANIANLFVYTLFPLFVQLLAPHAELKNTGFFGIELYLGDYMSAAAGPAWFKVYAVY
                     MVIGFVALMLSYFGTKERIIPTAEETDKVKYSDLVNELKRNRPLQILGLFFLIGFTFM
                     FFGNTVWPFYLKYNIGHSEWIASVGLLGSIPGIFLVFLWPKLRRTIGKKNFFYLFLGI
                     FVLGQLCLWVWQFDSFKYSPTLGYIGRFLQQWGLTSATGFMWALVPEVVTFGEFKSKK
                     RVAGIINALMGLFFKIGLALGGIIPGYINAVYGFNGSLLAQTEEALFGINLSMIWAPI
                     ILAIIAGFVMSRYPLSDTDIDHINEKITAYSK"
     gene            4680..5726
                     /locus_tag="PXD69_001777"
     CDS             4680..5726
                     /locus_tag="PXD69_001777"
                     /inference="COORDINATES: protein motif:HMM:NF016497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HDL6283955.1"
                     /translation="MQIQNPVLPGFNPDPSIVRVGDTYYIATSTFEWFPGVRIHESKD
                     LVHWNLVKNVLDTTTLLDMRGNPSSGGIWAPDLSYAEGKFWLVYTDVKITDGAFKDMT
                     NYLTTAKEIQGPWSAPIKLNGIGFDASLFHDDDGRKYLVQQTWDHREYHHPFDGITLT
                     EFDVATMKLKPETQRTIFEGTEVKLVEGPHIYKINGEYYLFAAEGGTVFTHQEVVARS
                     KTLEAHSFQLAPNTPFITNFDTPNSYLQKQGHGSLVDTPSGEWYYASLTARPWNHATE
                     SATDPRGWSTLGREAAIQKVEFDQDGWPYIVGGHGGKTFVEAPKDAIFTEAPIDHSQH
                     DEFDSSTLDINWNT"
     gene            5729..6367
                     /locus_tag="PXD69_001778"
     CDS             5729..6367
                     /locus_tag="PXD69_001778"
                     /inference="COORDINATES: protein motif:HMM:NF036826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,4-xylosidase"
                     /protein_id="HDL6283956.1"
                     /translation="MPFSKEMGEVGNGVLKLIGRGSLANTHDLSLIARRWQAFYFDAE
                     TKVKFTPFSYQSMAGLTNYYNHSHWSWIFITKNDQGQQVIEVAENKGGLRNGQYTSYL
                     KDKAIVIPDGTEYVWFKTKVRKETYRYEYSFDGKQWHTIPVELDAAVLSDDYVLRSYG
                     GFFTGAFVGLAAVDYSSYESTAEFSYFDYKELGDKQLTDGSFSWEKSESCFG"
     gene            6386..7366
                     /locus_tag="PXD69_001779"
     CDS             6386..7366
                     /locus_tag="PXD69_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL6283957.1"
                     /translation="MKQRRFGKTNKMVSEIGLGTWQLGTKWGEPFNHQEAMAILETAY
                     EQGINFIDTADVYNNGQSEKAIGDILKKYPDFFYVVTKCGRALNPHTAEMYTPQAIEK
                     FVDGSLSHLGTEKLDMILLHCPPTLVYRNDEIFTKLEQLKAGGKLIDYGVSIETAEEG
                     LLAMEYDIAAMEVIFNMFRLKPLEQLFPTAQQKNVGIIARVLLASGLLTGRYNACTQF
                     GKDDHRTFNRNGEAFDKGETFSGVDYQLGLQAVEELKALFGTEDLIPYALRWVLMNEA
                     VSTVIPGASKVSQVITNAAVDNFPPLTENEMQKVEDIYNRLIRPSVHHLW"
     gene            complement(7428..8768)
                     /locus_tag="PXD69_001780"
     CDS             complement(7428..8768)
                     /locus_tag="PXD69_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL6283958.1"
                     /translation="MFSFLKASPPAEQKVEASRVDAEYRKLRWQVFAGVFIGYAAYYL
                     IRKNFSLAMPYLIDEYGFTKADLGTVGVALSLAYGFSKFIMGNVSDRSNPKYFITIGL
                     LGSAIVSLVFGLVPGVLSSIPIMIILAALNGWFQGMGYPPGAKTMTNWFSTSERGVWW
                     SWWNVSHNLGGGLIGPLAILGLSIFGVWQSLFYLPALIAIVLAFVMFYLMRDTPESQG
                     LPPIDEYKGEKVVEKVESAHTLSSKDIFYKYILNNKFLWAIAIANVFVYFIRYGIIDW
                     APTYLKEVKHFSVDKQSWAYFLYEYAGIFGMLASGYLSDKVFKGHRAPPMLLFLAGVL
                     IAIVVYWKNPAGNPLIDNICLVAIGFLIYGPVMMIGLQAADLVPRVATGTATGLTGLF
                     GYLLGSASAGYVMGKLVDMFGWDGGFYALILSCFLAFAFIALTLFKKTSKQLEV"
     gene            complement(8958..10031)
                     /gene="glpQ"
                     /locus_tag="PXD69_001781"
     CDS             complement(8958..10031)
                     /gene="glpQ"
                     /locus_tag="PXD69_001781"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDL6283959.1"
                     /translation="MKFKFKTLVAALALSATALGAYAQQSDKLVIAHRGASGYLPEHT
                     LESKALAFGQQADYLEQDLAMTKDNRLIVIHDHFLDGLTDVAKKFPERKRADGRYYVV
                     DFTLDEIKTLEMTENFEVKDGKQAQVYPNRFPMWQSHFTIHTLEEELEFIQGLEKSTG
                     KKIGIYPEIKAPWLHHKEGKDIALETLKVLKKYGYDSKTSPIYLQTFDFNELKRIKTE
                     LLPKLGMDVKLVQLVAYTDWHETEEKDKNGNWVNYDYDWMFKDGAMAEVAKYADGVGP
                     GWYMLVDKEKSKVGNIVYTPLVKELAKYKMELHPYTVRKDALPDFFQNVDEMYDALLN
                     KAGATGVFTDFPDTGVEFLKKQK"
     gene            complement(10101..11546)
                     /gene="glpT"
                     /locus_tag="PXD69_001782"
     CDS             complement(10101..11546)
                     /gene="glpT"
                     /locus_tag="PXD69_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HDL6283960.1"
                     /translation="MFGPFKPAPHIAELPADKVDARYKFLRWQVFAGIFFGYAAYYFV
                     RANFDLAQKGLIEAGMYTKTDLGVIGTAAGLAYGLSKFVMAGMSDRSNPKVFLPTGLL
                     LSGLCMTLMGLMPWATSSILVMWVMIFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVS
                     IWNTAHNLGGMVPGAMVLLASALYFSEYGVEATAKDVWQQALYFPGIAAMIAAIPIYL
                     VMKDTPQSCGLPPVEKWRNDYPDDYNEKTYEHDLSTKEIFVTYVLKNKLLWYIAIANV
                     FVYLIRYGVLKWSPVYLGEVKHFNIKGTAWAYTIYELAAIPGTLLCGWVSDKLFKGKR
                     GLTGFIFMILTTAAVVAFWLNPATPESEIAQYAGHAWYENPYQLMDFIWMTTIGFLIY
                     GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGTVAASAVVGWAADKFGWDGGFYVM
                     IGGGVLAILLTFIVMVEEGKHKAKLEDHYGK"
     gene            11904..13499
                     /locus_tag="PXD69_001783"
     CDS             11904..13499
                     /locus_tag="PXD69_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HDL6283961.1"
                     /translation="MQRHEQLAQVQQTQKWDFIIIGGGASGLGIAVDAASRGYKTLLL
                     ESHDFAKGTSSRSTKLVHGGVRYLANGDVALVREALRERGRLAKNAAHLFKNQSFIIP
                     NYKFKDCVMYRVGLGLYDMLSGNLSLGKTENISKTEAKRRLPTLNDTGLRTGTVYQDG
                     QFDDSRLAVNMAQTVVEHGGTVLNHAKVTSLHKTPQGKIDGVTFYDELNQQEHTVFGT
                     AVINATGVFMNDILSMDHGSTKKFVVPSQGIHLVLDKSFLPSNDALMIPKTSDGRVLF
                     AVPWHEVLVVGTTDTLIENPSYEPIPLEQEVNFILETAAQYLTKKPTRDDVKAVFAGQ
                     RPLAAPEKEGQSTKEVSRSHKVLTDATSGLITITGGKWTTYRQMAEDTVEEALKVHSE
                     LGNKPCVTVNLPIHGNIPAAQVNLQDHLYVYGSDIPQLRALMTETPEYAQKIHPRLDY
                     TVAEVIWAVRHEMAQTVEDVLARRVRLLFTDARAAIDSAAKVAAIMAKELGKDEMWQQ
                     QQVIQFLDVAKHYLLVDYQPQPI"
     gene            complement(13586..13885)
                     /locus_tag="PXD69_001784"
     CDS             complement(13586..13885)
                     /locus_tag="PXD69_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283962.1"
                     /translation="MENIKMEELKLTEKELLVLKGNALRMRFKAETNKTKNEIMQPFK
                     QVKQTGLALVNSPAVKTIALDFLVKRLLSMKGISFSVLGLTAFFLLQQKHKRDDS"
     gene            complement(13872..>14176)
                     /locus_tag="PXD69_001785"
     CDS             complement(13872..>14176)
                     /locus_tag="PXD69_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDL6283963.1"
                     /translation="NEQKNQLISVLIFILLAFVFLLVSFVSLLFGLDNYLLPEQKVKV
                     FFSIAIIMFIAVTICGMMILSALKKQRHFMQSTLTELKLDIAAFKSALTLKQNGEH"
BASE COUNT         4219 a         2909 c         2976 g         4072 t
ORIGIN      
        1 ttagatctta acctctctaa aaatctattt cccagatgat ccctttttac gctaaaatat
       61 gcgttcattt ttcagcagaa tttgtaagat agtagaagag atatgattta caaccaaatt
      121 tacgatgtga tcgtggtcgg cggtggtcac gccggcacag aagcggccct agcaccggca
      181 cgaatgggct taaaaaccct gattttaacc cacaatgttg ataccttagg gcaaatgtcg
      241 tgcaacccgg ctatcggagg gatcggcaaa ggccatctgg ttaaagagat cgatgcgatg
      301 ggcggtttaa tggcaaaagc aacagacgtt gccgggatcc aattccgtac cctaaacaac
      361 tcaaaagggc ctgcggtgcg tgccacccgt gcccaagctg accgtgtgct ttaccgtaat
      421 gcggtacgca ctgcgttaga aaatcaacca aatttagata ttttccagca agaagtagtg
      481 gatattttgg tggaaaacaa ccgtgcagtg ggtgcagtta ccaaaatggg cttaacgttt
      541 aaagcccgtg cggtagtttt aaccgctggt acgttcttag cgggtaagat ccacattggg
      601 ttggataact atgcaggtgg tcgtgccggc gatcctgctg caacaatgtt ggcagatcgt
      661 ctgcgtgatc tgaatttgcg tgttgatcgc cttaaaacag gtacaccacc tcgcctcgat
      721 gcccgtacca tcaactttga cgtacttgcc aaacagcacg gcgatgaggt gttacctgtc
      781 ttctctttta tgggcgatgt ctcacagcac ccacgccaaa ttccgtgcta catcacccac
      841 actaacgatc aaacccacga tttaattcgc aacagtcttg atcgcagccc gatgtacacc
      901 ggtattatcg aaggggttgg tccacgttac tgcccgtcta ttgaagataa agtaatgcgt
      961 tttgccgatc gtaatagcca ccagatctac cttgaaccgg aaggcttaaa tacgattgag
     1021 gtttacccga acgggatctc caccagcttg ccgtttgatg tgcaaatggg gatcgtcaac
     1081 tcaatgaaag gcttggaaaa cacccgcatc atcaaaccgg gctatgcgat tgagtacgac
     1141 tacttcgacc cgcgtgattt aaaaccaacc cttgaaacca aagcgattga cggtttattc
     1201 tttgccggac aaattaacgg cacgaccggt tacgaagagg caggtgcgca aggtttgctg
     1261 gcagggatta acgcagcgtt acaggttcaa ggtaaagagg cgtggtatcc aacccgtgat
     1321 caagcctaca ccggcgtgtt ggtggacgac ctctgtacat taggcaccaa agagccatac
     1381 cgtgtgttta cctctcgtgc cgaataccgt ctgttgctgc gtgaagacaa tgcggacatt
     1441 cgtttaacac caaaagccca cgaactagga ttaattgacg aggcacgttg ggtgcgtttc
     1501 aaccaaaaaa tggaagcgat tgagcaagaa agagctcgtt tgaaatccac ttgggcacat
     1561 ttgcaaatgc caaatctgga cgaattgaac gcgttattgg ctaatccttt agcccgtgaa
     1621 gcaagcggtg aagacttaat ccgccgtcct gaaatgagtt acgaaaagct gacccaaatc
     1681 gccctatttg cccctgctat tgaagacaag caagtggcag aacaggtgga aattgcgatc
     1741 aaatatcagg gctatattga gcatcaatac aacgaaatcg aacgccataa acgccacgaa
     1801 aacaccctga ttccggtaga gtttgactac gacaaagtcg aaagcctctc caacgaagtg
     1861 cgagctaaat tgatgcaaca ccgccctgtc tctatcgggc aggcaagccg catttccggc
     1921 atcacaccgg cagcgatttc cattctgttg gtgaatttga agaagcaagg aatgttgaaa
     1981 cggggtgagc tgtaaatact acaagcggtt ggttttgcag aaatttttgc aaaattgacc
     2041 gcttgtattc tttggagaag gaaatacccg aactaccgcc gtatttttaa tgatatatct
     2101 gcgtaaactc ggtttttcgc cgttcgatca ccaaatgttt gcccaacctt cgtggtattt
     2161 ctgcaatgca cttgttcata ccaattatga aaatctgcga caaggtgtat ttgtgactaa
     2221 agcgtattta gtgatgtttc ttgaaaattt attgtttgaa aaaagtcatt cgttaagtaa
     2281 tcgggcattg cgtattaatg aaaataatga ttaaggaatt tgcaaaatgt tagctaaatt
     2341 aaaccgcttg cttgctcaag ccgaaataaa tttgaccgat caacaaaaag agcagttagt
     2401 tggttttgtg agattattgg ataaatggaa taaggcgtat aacctcactt ccgttcgcaa
     2461 ccctgatgaa atgttggtta aacatatttt ggacagcctt gttgttagtc gtcatttaca
     2521 aggcgaaacg tttattgatg tcggcacggg gccggggcta ccgggcattc cgctggcgat
     2581 tgctaaccct gataaacagt tcgtgctact agacagctta ggcaaacgca tcacttttat
     2641 caaaaatgcg ttgcgtgagc ttggtattaa aaacgttacc ccagtgcaaa gtcgagtgga
     2701 ggaatacact gaaagccagt ttgacggcgt attaagccga gcctttgcct cgcttaatga
     2761 tatgatcgac tggtgttatc atttaccgac tgaaaacggt aaattttatg cattaaaagg
     2821 cgtgtatgat gagcaggaaa taattgaaat caaacaaccg attcagctag tggaagtgat
     2881 taagcttgaa gtacctgagt tggtaggaga acggcattta gtagtgttga aaaagcccta
     2941 atacattgga agtttaatga tacaagcggt cgaatttgta aatttttttg caaatctgcc
     3001 tgcttgtgtt aactattttt cataaagcat acctggttaa taaggtgtgc tttttttata
     3061 acctattatt tcatctgatt tatttctatt ttgtgatgtg cttcacaaaa acaaaaaaac
     3121 ataatgtagt aaaaaatatt cgtaattgaa gcccttattt ctttacctga aaataagcga
     3181 acttaattat ataacgagga ggttcgtaat gaacagggta acaaataagg cagatgagtt
     3241 tgctaaactc agtacgtttg aacgtattgc ttatggtagt ggcgacttag cccaaaattt
     3301 agtttttggt acagttggtg gtttcttact cacttactta actactgtaa acggcatttc
     3361 tgccgtagca ggagcaacga ttttcttaat tgtaaaatgg ggaaatgtgt tttgggatcc
     3421 gtttgtcggt gcctttattg acaaaagcaa gccctcagca cagggtaaat accgcccgta
     3481 tttactgaaa tttgggattc ctcttgtggt tttagcttca ctactatttc ttcctcttga
     3541 atcagtacgt ggctcagtga tttatgcttt cctttcttat tttgccactg cgatggttta
     3601 ttcttttgtt aatattcctt atggctcgct ttctgcttct cttactcgag acacagacga
     3661 aattgctaaa ttaaccacaa cccgtatgac aatggcaaat atcgctaatt tgtttgttta
     3721 taccttattc ccactttttg tgcagttact tgcaccacat gccgaattaa aaaacaccgg
     3781 ctttttcggt attgagctct atttaggtga ttatatgtct gctgctgcag gccctgcttg
     3841 gtttaaggtt tatgcggtct atatggtaat tggatttgtg gcgttaatgc tctcttattt
     3901 tggtactaaa gagcggatta ttccaacagc ggaagaaaca gataaagtca agtattcaga
     3961 tttagttaat gaactcaaac gcaatcgtcc attacagatt ttagggttat tcttcttaat
     4021 aggttttact tttatgttct tcggaaatac ggtgtggcct ttttacctaa aatataatat
     4081 tgggcattct gagtggattg cctccgtcgg tttattaggc tctatccctg ggattttcct
     4141 tgtattctta tggccgaaac tacgtcgcac tatcggtaaa aagaactttt tctatctatt
     4201 tttagggatt ttcgttctag ggcaactttg tctatgggta tggcaatttg actccttcaa
     4261 atactctcca accttaggct atatcggtcg tttcttacaa caatggggat taacttctgc
     4321 taccggtttt atgtgggcgt tagtgcctga ggttgttacc tttggagagt ttaagtcgaa
     4381 aaaacgtgta gcaggtatta ttaatgcgtt aatgggcttg ttctttaaaa tcggcttggc
     4441 gttaggcggt attattccgg gttatattaa tgcggtttat ggttttaacg gctcgctttt
     4501 ggctcaaacc gaagaggctt tatttggtat caatctttca atgatttggg ctccaattat
     4561 tttagcgatt attgcaggat ttgtgatgag tcgctatccg ttaagcgata ctgatattga
     4621 tcatatcaac gaaaaaatta ctgcttattc caaataattt gagtatagga gaatagatta
     4681 tgcaaattca aaatccagtt ttacccggtt tcaatccaga tccatctatt gtgcgtgtgg
     4741 gtgatactta ctacattgca acttctactt ttgaatggtt tccgggagtg agaattcacg
     4801 aatcgaaaga tttagtgcat tggaatttag ttaaaaatgt cttagataca accacgttgt
     4861 tagatatgcg aggcaatccc tcttcaggtg gtatctgggc tcctgatctt tcttatgcgg
     4921 aaggtaaatt ttggttggtt tataccgatg taaaaattac agacggtgca ttcaaagata
     4981 tgactaacta tctaactact gccaaagaaa ttcaaggtcc ttggtcagct ccgattaaat
     5041 tgaatggtat tgggtttgat gcttcgttgt ttcacgatga tgatgggcga aaatatttag
     5101 tgcaacagac ttgggatcac cgtgaatatc atcacccctt tgacggtatt acgttaacgg
     5161 aatttgatgt tgccacaatg aaactcaaac ctgaaaccca gcgtacgatt tttgaaggta
     5221 cagaagtgaa attggtggaa ggtccacata tttataaaat taatggcgaa tattatctgt
     5281 ttgcggcgga aggcggcaca gtatttacgc atcaagaagt agtggctcgt tctaaaacat
     5341 tggaggctca ctctttccaa ctggctccaa atacaccgtt tattactaat tttgatacac
     5401 ctaattctta cctacaaaaa caagggcacg gttcattagt tgatacccca agtggtgaat
     5461 ggtattacgc ttccctcaca gcaagacctt ggaatcatgc aacagaatcc gcaaccgatc
     5521 ctcgtggttg gtcaacatta gggcgtgaag ccgccattca aaaagtagaa tttgatcaag
     5581 acggctggcc ttatattgtg ggtggacacg gtggaaaaac ctttgtagaa gccccaaaag
     5641 atgcaatttt taccgaagct cctattgatc attctcaaca cgatgagttt gatagctcaa
     5701 cgttagatat taactggaac acttaagagt gccttttagt aaagagatgg gcgaagttgg
     5761 taatggtgtt ttaaaattga ttgggcgagg ctctcttgca aatacacacg atttatcgct
     5821 aatcgcacgc cgttggcaag ccttctattt tgatgcggaa accaaagtga aatttacacc
     5881 gttttcttat caatctatgg caggtttaac taactattac aatcactcac actggtcttg
     5941 gattttcatc accaaaaatg atcaaggaca acaggtgatt gaagttgcag aaaataaagg
     6001 tggactcaga aatgggcaat atacttctta ccttaaagat aaagcaattg tcattcctga
     6061 tggaacggag tatgtttggt ttaagactaa agttcggaaa gaaacttacc gttatgaata
     6121 ttcattcgat ggcaaacaat ggcacactat tccggttgaa ttagatgcgg cagtgctttc
     6181 agatgattat gtgttacgca gttatggcgg tttcttcaca ggagcttttg tcgggctggc
     6241 tgcagtggat tactccagtt atgaatctac agcagaattt agctactttg actataaaga
     6301 gttaggcgat aagcaactta cagacggctc attctcttgg gaaaaatctg aaagttgctt
     6361 tggctaaaat gaggagaata tcacaatgaa acaacgcaga tttggtaaaa ccaacaaaat
     6421 ggtgtcagaa attgggttag gcacttggca gcttgggacg aaatggggtg aaccgttcaa
     6481 tcatcaagag gcgatggcaa ttttagaaac cgcttatgag caaggcatca attttattga
     6541 taccgctgat gtgtataaca acgggcaaag cgagaaagcc attggtgata ttttgaaaaa
     6601 ataccctgac tttttctatg tcgttaccaa atgtggacgt gcgttaaacc cgcatactgc
     6661 tgaaatgtac acgccacagg caatcgaaaa atttgttgat ggtagtttaa gccatcttgg
     6721 cacggaaaag ttggatatga ttttgctcca ctgcccgcca acgttggttt atcgcaatga
     6781 tgagattttt acgaaattgg aacagcttaa agccggcgga aaattaatag actacggtgt
     6841 gagtatcgaa acggcagagg aaggcttgtt ggcaatggag tatgacattg cggcaatgga
     6901 agttatcttc aatatgttcc gcttaaaacc attggagcaa ctcttcccaa ccgctcagca
     6961 aaaaaatgtg ggtattatcg cccgtgtact gttggcaagt ggtttgctta caggcagata
     7021 taatgcctgc acccaatttg gcaaagacga ccaccgcaca tttaaccgca atggtgaagc
     7081 cttcgataaa ggcgaaacct tttcgggtgt ggattatcaa ctcggtttac aagcggtgga
     7141 agaattgaaa gccctattcg gcacggaaga tttaattcct tacgccctac gttgggtatt
     7201 gatgaatgaa gctgtgagta cagtaatccc gggagcaagt aaggtttcac aagtaattac
     7261 taacgcagcg gtggataatt tccctccact cactgaaaat gaaatgcaaa aagtggaaga
     7321 tatttacaac cgcttaattc gcccaagtgt gcatcatttg tggtaattta tccaacgcta
     7381 taaaaaatgg aactctaact tgagttccat ttttgtcaat tttagcctta aacctctaac
     7441 tgtttagagg ttttcttaaa cagagtcaat gcaataaacg caaaggctaa gaaacaggaa
     7501 aggatcaggg catagaaacc accgtcccag ccgaacatat caaccagttt acccatcaca
     7561 taacctgcac ttgcagagcc taacaagtag ccgaataaac cggttaaacc tgttgctgta
     7621 ccggtggcaa cacgaggcac taaatccgct gcttgtaaac cgatcatcat caccggcccg
     7681 tagattaaga aaccaatcgc cactaagcag atgttgtcga ttaacgggtt gccggctggg
     7741 tttttccagt acaccacaat cgcaattaac acaccagcaa ggaataacaa catcggcggc
     7801 gcacggtgac ctttgaatac tttgtcgctt aaataaccgc ttgcaagcat accgaagata
     7861 ccggcatatt catacaagaa gtacgcccag ctctgtttat ccacagagaa atgtttcact
     7921 tcttttaagt aagtcggtgc ccagtcgata atgccgtagc gaatgaaata gacaaacacg
     7981 ttggcaatcg caattgccca caggaatttg ttgtttaaaa tatatttgta gaaaatgtct
     8041 ttggaagaga gtgtgtgggc agactccact ttttccacca ctttctcgcc tttgtactca
     8101 tcaatcggcg gtaagccttg agattccggc gtatcacgca tcaaatagaa catcacaaac
     8161 gccagtacaa tcgcaatcaa cgccggcaga tagaacaggg attgccacac gccaaaaata
     8221 gataagccta aaatcgccaa cggcccgatt aaaccgccgc ccaagttgtg cgacacgttc
     8281 caccagctcc accacacgcc acgttcagag gttgagaacc agttggtcat cgttttcgcc
     8341 cccggcggat agcccattcc ttggaaccag ccgtttaacg ccgccaaaat gatcataatt
     8401 ggaatagacg aaagcacgcc cggtactaaa ccgaacacca gactcacaat cgctgaaccg
     8461 agcaagccga tagtgataaa gtatttcggg ttagaacggt cggaaacgtt acccataata
     8521 aatttactga agccgtaagc gagtgataat gccacgccca ccgtacctaa gtctgctttg
     8581 gtgaagccat attcatcaat caaatacggc attgccaacg agaagttttt acgaattaaa
     8641 taatatgccg catagccgat aaagacgcct gcaaacactt gccaacgtaa tttgcgatat
     8701 tccgcatcaa ctctgctggc ttccactttt tgttctgctg gtggagaggc ttttagaaag
     8761 gaaaacattt tactactcct ttaagaatga aatcctatgg ctactataat ctttcatttg
     8821 gagcagaaaa agtggatttt tgaaaatttg tgagcaagat taaaattatt ttgagcgaaa
     8881 acgaaaagcg gttgaatttc cttctttttt tgcaaaaaat ttgagaaatc taaccgcttg
     8941 tttcacttaa aaatcagcta tttctgcttt ttcaaaaatt ccacgcccgt atcagggaag
     9001 tcagtaaaga cgcctgttgc acccgcttta ttcagcaggg catcgtacat ttcatcgaca
     9061 ttttggaaaa agtccggcag agcatctttg cgcacggtgt atgggtgaag ttccattttg
     9121 tacttcgcca actctttcac taatggcgtg taaacaatgt tgccgacttt agatttttct
     9181 ttatccacca acatatacca gcccgggccg acaccatcgg catattttgc cacttctgcc
     9241 atcgcaccgt ctttgaacat ccagtcgtag tcgtaattaa cccagttgcc gtttttatct
     9301 ttctcttcgg tttcgtgcca atcggtgtag gcaactaact gcaccaattt tacgtccata
     9361 cccagtttcg gtagtaattc ggttttgatc cgtttcagct cgttgaaatc gaaggtttgc
     9421 aggtaaattg gtgaggtttt gctgtcgtag ccatattttt tcaacacttt cagggtttcg
     9481 agtgcaatgt ctttaccctc tttatggtgc aaccaagggg ctttaatttc aggatagatc
     9541 ccaatttttt tgccggttga tttctctaat ccttgaataa attccagctc ttcttccaaa
     9601 gtgtgaatgg tgaaatggga ctgccacatc gggaagcggt tcgggtaaac ttgtgcctgc
     9661 ttgccgtctt tcacctcaaa attctcggtc atttcaaggg ttttaatctc atcaagggtg
     9721 aaatccacca cataataacg accgtctgct cgtttacgct cagggaattt tttcgccaca
     9781 tcagttaaac cgtctaaaaa gtggtcgtga atcacaatca ggcggttatc tttggtcata
     9841 gcaagatctt gctctaaata gtccgcttgt tgcccgaatg ctagagcttt agattcaagc
     9901 gtatgctcag gtaaataacc gcttgcacca cggtgggcaa tcactaattt atcagattgt
     9961 tgtgcatagg cacccaatgc tgtcgcggac aatgctaatg cagcaaccaa tgttttgaat
    10021 ttaaatttca tagaattacc tcatataatg taaaaataaa aggaagaaca aaaatgtcct
    10081 tccttttgat aagttattta ttatttacca tagtgatctt ctaattttgc tttgtgcttg
    10141 ccttcttcaa ccatcacaat gaaggttaag agaatggcta atacaccacc accgatcatc
    10201 acgtagaaac cgccgtccca gccaaattta tctgctgccc agccaactac tgcagaggct
    10261 gccactgtac cacctaagta accgaataaa ccggtgaaac ctgctgctgt acctgctgct
    10321 tttttcggtg caagttcaag ggcgtgtaag ccaatcaaca ttaccgggcc gtagattaag
    10381 aaaccgatag tggtcatcca aatgaagtcc attaattgat atgggttttc ataccaagca
    10441 tggcctgcat attgtgcaat ttcagattcc ggtgtcgcag ggttgagcca gaacgcaacc
    10501 actgctgcgg tggtaagaat cataaagatg aaaccggtta aaccacgttt gcctttgaac
    10561 agtttgtcag agacccaacc acagagtaat gtacctggaa tcgcagctaa ttcataaatg
    10621 gtatatgccc atgctgtacc tttaatgttg aagtgtttta cttcgcctaa gtacaccggc
    10681 gaccatttca atacgccata gcggattaag taaacgaaga cattcgcaat ggcaatgtac
    10741 cataacagtt tgtttttcag cacataagtc acgaaaatct ctttggtgct taaatcgtgt
    10801 tcataggttt tttcgttata gtcgtcaggg tagtcgttac gccatttttc aactggcggt
    10861 aaaccgcaag attgtggagt atctttcatc acaaggtaga ttggaatagc tgcgatcatt
    10921 gctgcaattc ccgggaaata aagggcttgt tgccatacat cttttgccgt tgcttctaca
    10981 ccatactcac tgaaatagag cgcacttgct aatagcacca tcgcccccgg caccataccg
    11041 cctaagttgt gagcggtatt ccagatagaa acgatagtac cacgctcaga tttagaccac
    11101 cagtgaacca ttgttcgtcc acacggtggc caacccatac cttgaaacca gccgtttaag
    11161 aagatcatta cccacattac taaaatgctt gatgttgccc aaggcattaa gcccataagg
    11221 gtcatacata gacctgaaag taacaatccg gtcggtaaaa atactttcgg gttagagcgg
    11281 tcggacattc ctgccatcac gaattttgat aaaccgtagg ccaggccggc agctgtacca
    11341 atcacaccga gatcggtttt tgtatacata ccagcttcaa tcaagccttt ttgtgctaag
    11401 tcgaagtttg cacgcacaaa atagtaagcg gcatagccga agaaaattcc tgcaaacact
    11461 tgccaacgca agaatttata tcttgcatcg actttgtccg ccggtaattc cgcaatgtgc
    11521 ggagcgggtt taaatggacc aaacatagta ttctccaata ttacttagta aaacctctga
    11581 gtaattcctt tttaggaaat tagggaagca ataataaatg aaaataaaaa atgacaaagt
    11641 tattttttat aaaaatgtga ttcatttcac aaaaaattta ccttaaacca caaaaaatga
    11701 ttgaaaaaga aaatcaaaca tcagtatctc tagcgataaa actctcttct tatgtacaga
    11761 gaaagaacca taaaaagtac aatatagaaa tattttgtga catagatcta atttttaaac
    11821 aaatgtcttt gaagtcattt tattttcgtt tatgctaatt aagtaatgat taaatgtttt
    11881 aattcgagca aaaggagcaa aaaatgcaaa gacatgaaca gctagctcaa gtacaacaaa
    11941 cgcaaaaatg ggattttatt attatcggtg gtggcgcaag tggtttgggg attgcggtag
    12001 atgcagcttc ccgtggctat aaaaccttat tattagaaag ccatgacttt gcgaaaggta
    12061 catcgagccg aagcacaaaa ttagtccacg gtggcgttcg ctatcttgca aatggcgatg
    12121 ttgcactcgt gagagaagca ttgcgtgaac gaggtcgttt agctaaaaat gcagctcatt
    12181 tatttaaaaa ccaaagcttt attattccaa actacaaatt caaagactgt gtaatgtatc
    12241 gtgttggttt aggcttatac gatatgcttt caggcaacct gagtttagga aagactgaaa
    12301 acatcagtaa aactgaagcg aaaagacgtt taccaacctt aaatgatact ggtttacgta
    12361 caggcactgt ttatcaagat gggcaatttg atgactcacg tcttgcagtg aatatggcac
    12421 aaacggtagt agagcacggc ggtacagtac taaatcacgc caaagtgact tcactgcaca
    12481 aaacgccaca aggcaaaatt gatggggtga ctttctacga tgaactcaat caacaagaac
    12541 atactgtttt cggcactgcg gtgattaacg caaccggcgt atttatgaat gatattttaa
    12601 gtatggatca cggtagcacg aaaaaatttg tcgtaccaag ccaagggatt cacttagtat
    12661 tagataaatc attcttacca agtaatgatg cgttaatgat tccaaaaacc tctgacggac
    12721 gagtgttatt tgctgtacct tggcacgaag tgttagtcgt agggacaaca gatactctga
    12781 ttgaaaatcc ttcttatgag ccaattccat tggaacaaga ggtgaacttt attttagaga
    12841 cagccgcaca atatctgaca aaaaaaccaa ctcgtgatga tgtaaaagca gtctttgccg
    12901 gtcaacgtcc gcttgcggca ccggaaaaag aaggtcaaag cactaaagaa gtatctcgta
    12961 gtcacaaagt tctcactgat gcaaccagcg gtttgattac gattacaggt ggtaaatgga
    13021 caacttatcg tcaaatggca gaagataccg tagaagaagc gttaaaagtc cactctgaac
    13081 taggcaataa accttgtgtg accgtcaact taccgattca cggtaatatt ccggcagcac
    13141 aagtgaatct acaagatcat ctatatgtat atggctcaga tattccacag ttacgcgcct
    13201 taatgactga gaccccggaa tatgcacaaa aaatccatcc gagactagat tataccgttg
    13261 cagaagtgat ctgggcagtt cgccacgaaa tggcacaaac ggttgaggat gtattagctc
    13321 gccgtgttcg tttgctcttc actgatgcga gagcggcgat tgatagtgca gcaaaagtgg
    13381 ctgctattat ggcgaaagaa ttaggtaaag atgaaatgtg gcaacaacag caagttatcc
    13441 agttccttga tgttgcgaag cactatttat tggtagatta tcagccacag ccaatctaat
    13501 acgctaaaag caagcggtta aaatcgataa aaatattgca attacgttat ttgcaacttt
    13561 ttaaaccatt ttaaccgctt gtatattagc tatcatctct tttatgtttc tgttgtaata
    13621 aaaagaatgc tgttaacccc aatacagaaa agctaattcc tttcatactc aataatcttt
    13681 ttaccaaaaa atctaatgca atggttttaa ctgccggtga attgaccagt gcaagccctg
    13741 tttgtttcac ttgtttaaaa ggctgcataa tctcattttt ggttttattg gtttccgctt
    13801 taaatcgcat tctaagtgca ttacctttta gaactagaag ttccttttcg gttaatttaa
    13861 gctcttccat tttaatgttc tccattctgt ttcaaagtta aagcactctt aaatgcggca
    13921 atatctaatt ttagctcggt taatgtactt tgcataaaat ggcgttgttt tttcaaggca
    13981 gaaagtatca tcattccgca aatagtcaca gcaataaaca taataatggc aatagaaaag
    14041 aatactttaa ctttctgttc gggtaacaaa taattatcta aaccaaataa taaactcaca
    14101 aaagaaacta ataaaaatac aaaagccaat aagataaata taagtactga aattaattga
    14161 tttttttgct cattaa
//
LOCUS       DANLXO010000071        14094 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.071, whole genome shotgun sequence.
ACCESSION   DANLXO010000071 DANLXO010000000
VERSION     DANLXO010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14094
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.071"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(241..1557)
                     /gene="argA"
                     /locus_tag="PXD69_001786"
     CDS             complement(241..1557)
                     /gene="argA"
                     /locus_tag="PXD69_001786"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HDL6283964.1"
                     /translation="MQNTELALAQWFRQSTPYVNMHRGKTFVIMLDGDVIESPNFVNI
                     INDISLLHSLNIKLVIVFGARPQINQLLKQNHIEPEYYHNIRVTNPQSLEYVKQAVGK
                     VHYDFFARLSLRLPHSEVINVVSGNMILAQPIGVVDGVDYTLSGKIRRINIESIKQQL
                     AQNSIVLLGPIAPSVTGEMFNLPFEDIATQVAIKLRADKLIGFCEEQGILDENGKPIP
                     DYLPQDGETLLQQLIERGEYHTPKARFLQAANTVCREGVKRSHLLSYKEDGSLLQELF
                     SRDGIGTQFSMESSEQVRIANSSDIPGLLDLIRPLEQQGILVKRSREQLEMEITNYTI
                     IERDGVVIACAALNPYPEEKMAEMACVAVHPDYRDSSRGDILLENIQKRAVQLGMEKL
                     FVLTTRTTQWFQERGFRLAGAQDLPRYKRENYNYQRRSKVLILPLW"
     gene            complement(1686..1871)
                     /locus_tag="PXD69_001787"
     CDS             complement(1686..1871)
                     /locus_tag="PXD69_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1508 domain-containing protein"
                     /protein_id="HDL6283965.1"
                     /translation="MYFEIYKDAKEEFRWRLKAGNHEVIATNQAYTTKQGCQKGIEAV
                     KKVTPETEVKDLTKAEA"
     gene            complement(1987..3309)
                     /gene="pepP"
                     /locus_tag="PXD69_001788"
     CDS             complement(1987..3309)
                     /gene="pepP"
                     /locus_tag="PXD69_001788"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HDL6283966.1"
                     /translation="MDLAYLAKMPQEEFTARRERVLEQMQDNSALLVFTESEKRRNSD
                     SEYLFRPDSYFWYLTGLAEPKSAVLLVKSEGKTESIIFVRKKDPLMETWNGRRLGIEE
                     APKTLQLNAAFDIDDIETVLAKKLENLTACYCALGIQEWGDNILFATFEKMKVNRQKV
                     PTTLIDWQPMLSEMRLIKSEFEIALIQQACHISSMAHIRAMKQARPNRYEWEIEGEIQ
                     HEFSRFGARFPAYNSIVAGGENACILHYNENDQVLKGGDLLLIDAGAEFAYYAGDITR
                     TFPINGKFSEPQKELYELTLTMQKEAINLLVPNSSIKAANDKAVQILTQGLVRLGILN
                     GDVESLIEQKAYRQFYMHGLGHWLGLDVHDVGDYGTERDRPLQIGMVLTVEPGIYIPK
                     DADVPEQYKGIGIRIEDNLLITEYGNKNLSSGCPKEIADVEQLMQSLN"
     gene            3525..3848
                     /locus_tag="PXD69_001789"
     CDS             3525..3848
                     /locus_tag="PXD69_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6283967.1"
                     /translation="MKLSSELQNQINQLNQLRKQALKQEQDEQKLFEKNKIEDLPHFG
                     TQLNAQRKLLGIELTTLEMQTGISSSTLKRLFKDPSQVKFQTICIVAETLGFNLCAIN
                     THKQE"
     gene            complement(3925..4943)
                     /gene="glpX"
                     /locus_tag="PXD69_001790"
                     /pseudo
     CDS             complement(3925..4943)
                     /gene="glpX"
                     /locus_tag="PXD69_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484632.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
     gene            5140..5358
                     /gene="zapB"
                     /locus_tag="PXD69_001791"
     CDS             5140..5358
                     /gene="zapB"
                     /locus_tag="PXD69_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HDL6283968.1"
                     /translation="MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTL
                     RSEYEQLKVEQQNFQDRLRSLLGQIDNV"
     gene            5414..5995
                     /locus_tag="PXD69_001792"
     CDS             5414..5995
                     /locus_tag="PXD69_001792"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014064645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDL6283969.1"
                     /translation="MAKLYFYYSSMNAGKSTTLLQSSYNYQERGMNTLVYTAAIDDRF
                     GVGKVNSRIGISQEANLFTADTNLFAEIKALHSNKALHCILIDEAQFLTKTQVYQLSD
                     VVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADELEELKTICDCGKKAHFVVRLNEK
                     GEAIKDGEQIQIGGNDRYLSVCRYHYKQKLGKL"
     gene            complement(6086..7204)
                     /locus_tag="PXD69_001793"
     CDS             complement(6086..7204)
                     /locus_tag="PXD69_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HDL6283970.1"
                     /translation="MTTTYFHLMAKPSSFHCNIQCEYCFYLSKEQTIPPEKSQFMNDE
                     TLQNYIRHYIEANQSQRVDFVWQGGEPTLLGLDFYKQAVKYQQKFANGKQITNAIQTN
                     GIALNRQWASFFKENHFLVGLSIDGLSDIHDRYRISTNGKPTFERVKSAVDLLKEVGV
                     EFNTLTVVNDRNWQRGRETYQALKALGSRYMQFIPVVESHKGELQPFSVPPQGYGQFL
                     VDVFHEWLPDRGQIFVIEFDNLLGQWLGYPSNNCVFRPTCGSSLVVEACGDVYSCDHF
                     VYPDYHIGNLNQQQLAEIVSSAAQRQFGQNKQAKLSQACLNCKFRILCHGGCPKHRIV
                     PQANSENHNYLCPSYQQFFAETSSVMRQMSEQIRFAGK"
     gene            complement(7294..8742)
                     /locus_tag="PXD69_001794"
     CDS             complement(7294..8742)
                     /locus_tag="PXD69_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL6283971.1"
                     /translation="MNNIIYILLDQVRKDMLGTYGHQVVKTPNLDRLAKDGIRFNNAF
                     TPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEIPQQNPNIAGVEGYNSFVIGKWH
                     VGTKSVPEDYGIAGHNFDGYGYPGSQVYKNLVFNQPPTHSNRYREWLAEKGYDAPEVS
                     RAYFGDNPHLRVQELCGLLSGSREQTIEWFIIDEAKKYIQASLDEKKPFFAWINFWGP
                     HTPCVVPEPYYSMYDPSQVVLDESFFKPLEGKPNHFRTISQMWGMWEASEDRWKEVIS
                     KFWGYITLIDDAIGELFRFLEENNLYENTFLVATADHGDAMGAHKMIEKGEFMFETTY
                     NIPLIIKDPHSTRVNEVDDNLVYLHDLTSTVYDVANQPIPTAFQGESILPITRQSQNN
                     DRKGLLCQLAGHFVYFEQRMWRRKDYKLVFNATDRCELYDVRKDPEEMHNLFYDEAYQ
                     AVKKEMLEEMRQEMKRLNDPLENWVYRIIDEI"
     gene            complement(8889..10586)
                     /locus_tag="PXD69_001795"
     CDS             complement(8889..10586)
                     /locus_tag="PXD69_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="solute:sodium symporter family transporter"
                     /protein_id="HDL6283972.1"
                     /translation="MLLTIITFLVVTGLVGYISWLKTRNDDLSTSKGYFLAGRGLSAT
                     VIGCSMVLTSLSTEQLIGVNANSYAGNFSIIAWTVPAVIPLCFLALYLLPKYIRNGYT
                     TIPEFFENRFDRQTRLIMSGLFLVFYLFIVIPTALYTGAIAFNKIFNLETAFGLSYGA
                     AITYTVIAIGIVGAIYAIFGGLKAVAVSDTWNAVLLVIGALLVPVFALIYLGNGSMAE
                     GVKIITTTHVEKWNAVGSATDAVPWPTIFTGIMVVHFFYWTTNQAIVQRALGARDLKA
                     GQKGILIAALFLLLLPLILNLPGLLSFHILGEGLKPIDVSYPELVNKTFPTVLQGFFI
                     AALFGAILSTFNSFLNSAATIYCKDLLPSISKKQFTDAELISYAKKVSAVMAVITMIF
                     GPLLMFGTDGIFLLTKRFAGFVNIPIVALFVIGLFNKTVSGKAARIALLAHVILYFCI
                     VWVFDVKINFVYVQAGLFVFDVALMLILGIFLKRATPYEDNKINHANVDLTSWEYAPL
                     AVASIVLGLFTLYAFLSPLGLASPDGNPAMVLAVYAVLQAVVCVVFFAKCKGKKAVN"
     gene            complement(10730..11281)
                     /locus_tag="PXD69_001796"
     CDS             complement(10730..11281)
                     /locus_tag="PXD69_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDL6283973.1"
                     /translation="MNNMPTPEQLMSCQLSVMSDLEKGVVIYSQGYHAREFYFLKSGL
                     IGLYHMLENGKESLVRVYKANDYFGFRTFFGDNRYHCSARVLQPAELIRITPLNFIEF
                     WSNNSALIISLLKQLSTELQDAEHRLSMVSYQKTQERVMNSIHYLHQRYPNYHWTNRE
                     IAEFAGCETETAIRLRRELKKIS"
     gene            11380..12189
                     /locus_tag="PXD69_001797"
     CDS             11380..12189
                     /locus_tag="PXD69_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL6283974.1"
                     /translation="MTMTVIIILIICGIIVNITSALFGIGGGVLMMPILHSLFPELPL
                     QVISACSLTIVIGSATINLCLFHHQQIKINRKNVLIWSLAMMLGVQIGFELSFLFSDN
                     SIIAIFILTLLTLSFKTLFHKPRVKAIVPPKPKEAVSNATMCSLGGLIAGITGIGGGS
                     IMAPIVTQIRSVSPKQVAVYTNYMMVIGGIGNLYGYLSRPFVLNSTLATWQIGYVNFA
                     IVGTVVISSLFTVYFSMKLRNILSPELTTKLLGVILFTIACYMGFLQYLFT"
     gene            complement(12206..12898)
                     /gene="tsaB"
                     /locus_tag="PXD69_001798"
     CDS             complement(12206..12898)
                     /gene="tsaB"
                     /locus_tag="PXD69_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDL6283975.1"
                     /translation="MKPSILALDTATEACSVALQYNGNITFLDEISPRSHTQRILPMV
                     DELLNQANIELKEVNYLVFGRGPGSFTGVRVGVSVAQGLAMGANLPVVAVSNLKAMAE
                     EAYQKLGATKVIALIDARMNEVYFAQFERKGEEWNEVVAEQVCSPEVAISQFQMSEET
                     VVVGTGWAAYSQFSEQNLPLVISDITLPSSRYMLSIAETEIQKGNIQSAFEIEPVYLR
                     NEVTWEKLPHKQ"
     gene            complement(12985..14067)
                     /gene="aroG"
                     /locus_tag="PXD69_001799"
     CDS             complement(12985..14067)
                     /gene="aroG"
                     /locus_tag="PXD69_001799"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HDL6283976.1"
                     /translation="MSYIKNDDVRITSIEELLPPIALLEAYPASDVAAETVAKTRQSI
                     HKILHGADDRLLVVIGPCSIHDPKAALEYAQKIKAMRADPKINQNLEVVMRVYFEKPR
                     TTVGWKGLINDPYLNETFALNDGLRIARKVLSDINDLSVPTAGEFLDMITPQYVADFM
                     SWGAIGARTTESQVHRELASGLSCAVGFKNGTNGSVKIALDAISSAKSPHHFLSVTKF
                     GHSAIVSTAGNPDCHIILRGGDSATNYDADSVAAACAAIEKSGGRPHVMIDFSHANSQ
                     KQFKRQMDVCADVCNQIAGGSDFISGVMIESHLVEGRQDLIEGKGLEALVYGQSITDG
                     CIGWEDSEKALFALAEAVEKRRNFAK"
BASE COUNT         4013 a         3127 c         2781 g         4173 t
ORIGIN      
        1 gtcttgtgtt taatgagagg gttgttagaa taaaacatga gagtttcctt tttgtttaga
       61 ttgatttttg acactcatat tctaaacggg aaactctcac tttttagagt gaattgtcag
      121 atcaagtctg atcttctaca gcagtaataa ttgccatagc ccctttgatg ggttgatgtt
      181 ttttcatagt tctcctttta tagttctctt ggtaacaagc ggtcaaaaac attgaatatt
      241 ttaccaaagt ggtaaaatta atactttaga acgacgttga taattgtaat tttcccgttt
      301 atagcgaggt aaatcttggg cacctgccag cctaaatcct cgctcttgga accattgtgt
      361 ggttcttgta gtcagcacaa agagtttctc cattcccagt tgcactgccc gtttttgaat
      421 attttccagt agaatatccc ctcttgagga atcacgataa tcagggtgaa ccgccacaca
      481 cgccatttcc gccatttttt cttccggata cgggttaagt gccgcacaag caatcaccac
      541 accatcacgc tcaataatgg tgtagtttgt gatttccatt tctaattgtt ctcgagagcg
      601 tttgactaaa atgccctgct gttcaagtgg gcggattaaa tccaataatc ccggaatatc
      661 actggaatta gcaatacgta cctgttccga gctttccatt gagaactgtg tgccaatacc
      721 atcacgagag aataactctt gaagcaatga gccatcttct ttatagctta ataaatgcga
      781 gcgtttcact ccctctcggc ataccgtgtt cgccgcctgc aaaaaccgag ctttcggggt
      841 gtgatattcg ccacgctcga ttaactgctg taacaaggtt tcgccatctt gcggaagata
      901 atctggaatt ggcttgccgt tttcatctaa aatcccctgc tcttcacaaa aaccgattaa
      961 tttatcggca cgaagtttaa ttgcaacctg tgtggcaata tcttcaaacg gcagattaaa
     1021 catttcaccg gtaacagacg gggcaatcgg accaagtaat acaatcgaat tttgtgccag
     1081 ttgctgctta atgctctcaa tattaatacg acggatttta ccgcttagtg tataatctac
     1141 cccatccacc acgccaatcg gctgagctaa aatcatatta ccactgacta cattaatcac
     1201 ttcagaatgg ggtaaacgca aagaaaggcg ggcaaagaaa tcataatgaa ctttccctac
     1261 cgcttgtttc acatattcta gcgattgtgg attagtcaca cggatattgt ggtaatactc
     1321 cggctcaata tgattttgtt ttaacaattg gttaatttgc ggtcttgccc caaatacaat
     1381 cactaatttg atattcaggc tgtgcaggag actgatgtca ttgataatat tgacaaaatt
     1441 cgggctttcg ataacatcgc catcaagcat aatcacaaag gttttgcctc tgtgcatatt
     1501 aacataaggt gtagattgcc taaaccattg agctaatgcg agttctgtgt tttgcatata
     1561 tttcctcttt ataatataaa cgcatattat cttttttaga aaaatccgca agccttaaat
     1621 tgaataatta agcattatat ttgcataaat aacaaagccc tgaaataata tcagggcttt
     1681 atagattatg cttcagcttt ggttaaatct tttacttctg tttcaggtgt aactttttta
     1741 actgcttcaa tgcctttttg acaaccttgc ttagtcgtat aagcttggtt ggttgcaata
     1801 acttcgtggt tacccgcttt taaacgccaa cgaaattctt cttttgcatc tttgtaaatt
     1861 tcaaaataca tataaacact ccttcgtgtt gtgattgccc aaacactgtg tttgtgtcgg
     1921 gttagcttaa gctaaattcc ccaaaatatc aaagcaagcg gtcatttttt tacaaaaatt
     1981 tgcgaattaa tttaacgatt gcatcaactg ctcaacatcc gcaatttctt tagggcaacc
     2041 gctgcttaag tttttgttgc cgtattcggt aatcagcaaa ttatcttcaa tccgaatccc
     2101 aataccttta tattgctccg gtacatccgc atctttagga atatagatac cgggttcaac
     2161 agttaacacc ataccaatct gcaaaggacg atcccgctcc gtgccgtaat cccccacatc
     2221 gtgaacatct agccctagcc aatgccctaa tccgtgcata taaaattggc gataggcttt
     2281 ttgctcaatc aggctttcca catcaccgtt taaaattcct aagcgaacca agccctgcgt
     2341 gagaatctgt acagccttat cgtttgccgc tttaatcgag ctgtttggca caagaagatt
     2401 aatcgcctct ttttgcatag ttaaggttaa ttcgtacagc tctttttgcg gttcggagaa
     2461 tttcccatta atagggaagg ttcgggtaat atcgccggcg taatacgcaa attccgcccc
     2521 tgcatcaatc agtaataaat cgccgccttt aagcacctga tcattttcat tgtagtgaag
     2581 aatacaggca ttctcaccgc cggcaacgat tgaattatat gccggaaacc ttgctccaaa
     2641 acggctaaat tcgtgttgaa tttccccctc aatttcccac tcataacgat tcgggcgagc
     2701 ttgtttcatc gctcgaatat gtgccattga agaaatatga cacgcctgct gaattaaggc
     2761 aatttcaaat tctgatttaa tcaaccgcat ttccgataac attggctgcc aatcaatcaa
     2821 ggttgtcggc actttttgcc gattgacttt cattttttca aatgttgcaa acaaaatatt
     2881 atcgccccac tcttgtatcc ctaacgcaca ataacaagcg gtcagatttt ctaatttttt
     2941 tgcaagaacg gtttcaatgt catcaatatc aaaagctgcg ttaagctgta acgtttttgg
     3001 agcttcctca atccctaaac gtctgccatt ccaggtttcc attaaagggt cttttttacg
     3061 cacaaaaata atactttccg ttttaccttc gctttttacc agcaatacgg ctgatttagg
     3121 ttctgccaaa ccggttaaat accaaaagta actatcaggt ctaaacaagt attcagagtc
     3181 actattacgg cgtttttccg attcggtaaa aaccaataac gcagaattat cctgcatttg
     3241 ctcaagcaca cgctcacggc gtgcggtaaa ttcttcttgt ggcattttag ccaaataagc
     3301 gagatccatt atttctcctt tttattatat ctatatcgaa acctgcctta ttttagcaca
     3361 aacgcagcat aaattcagcc taaccaaaac agatgaaaga ttatatttga gatcttgatt
     3421 gcaaaaacaa aacagattaa gattaaatat aacctttaca tatctaaaca ggttatattt
     3481 aacctatgaa cacataaata atctactttt agctcaaaaa taaaatgaaa ctatcaagcg
     3541 aactacaaaa tcagataaac caactaaatc agttacgaaa acaggcactc aaacaagagc
     3601 aagacgagca gaaattgttt gaaaaaaata aaattgaaga tttgccacat tttggcacgc
     3661 agcttaatgc tcagaggaaa ctattaggca tagaattaac cacccttgaa atgcaaaccg
     3721 gcatttcaag ctctacccta aaacgcttat ttaaagaccc aagccaagtg aaatttcaga
     3781 caatttgtat tgtggcagaa acactcggct ttaatttatg tgcaattaat actcacaaac
     3841 aagagtaagc gtgacaatgt agtgattttg attactttgg gaagacaaaa aatcgggcta
     3901 aaagcccgat ttatcagaga aaagctataa atccaataaa gaaaggagtt cgttatcttt
     3961 acgatcgaca taatggtcgg attgaatttt acgaatggtt ctagatttgc cacgaataag
     4021 taaggtttca gtgctggcaa tattgcctct acgtttaatc ccttttaaca attcacctga
     4081 agtaatgccg gttgcaacaa agacgatatt gtcatcacgc accaaatctt ctaatttcaa
     4141 caccgtattc accggtacat tcatttcatt acagcgtaaa agctcttttt cggtagcagt
     4201 taaattttcc gggctattcc ccttcacttg gttgcgagga attaaacgtg cttgcatatc
     4261 gccacccaat gcacgaaccg cagcccccgc cactacccct tcaggtgctc cgccgatacc
     4321 ataaagcaga tccaattcgc tctctggcaa acagcattgc accgcagccg caacatcgcc
     4381 atcaggaatc gcaatcactc ttacccctaa tttttgcaca tcggcaatta ttttttcgtg
     4441 gcgaggctta gcaagatagc aatggttaat tgggaaagta atttgccctt tttcgaggcg
     4501 acacggcgaa gattttgttc aagcggaaga tttaaatcaa tcattccttt gcattcctgc
     4561 cccaccacta atttttccat atacatatca ggggctttta aaaaggtttc tttgccgcct
     4621 gctgctaata ccgacaacgc atttgcctgc cccattgcag tcatacgagt accgtcaatc
     4681 gggtcaaccg caatactgat ttcctcatct tctaggcggg atagaccgat tttctcgcca
     4741 atataaagca tcggtgcttc gtcaatttcg ccctcaccaa ttaccacttc gccacggatt
     4801 tccatttggt tcagcataaa ccgcattgct ttcaccgcag cttcatcagc ggcattttta
     4861 tccccacggc ctagccaaga gtaagctgct agagccgctg cttccgtaac acgagaaaat
     4921 tcaaaagaaa gagttcgttt catttttgtt ccttagtttc ttgaaagaaa aactttaaaa
     4981 gaagagagat tatattttat cagtaacctg caagctacgt tactaaaaaa tcagcgtttg
     5041 aataaaaatt cacaaatagc caaacttttt tataaaaata aagtcagatt tagagtataa
     5101 tctttacaag tttttatatt attttagagg gaatttacta tgtcattatc ggttttagac
     5161 caattagaag aaaaaattaa acaagctgtt gaaactattc aattacttca attagaagtt
     5221 gaagaattaa aaggtaaaaa cgatgcagcg aaacaagaaa acgacacctt gcgcagcgaa
     5281 tatgaacaat taaaagtgga acaacaaaac ttccaagatc gtttacgttc acttttaggt
     5341 caaatcgaca acgtttaatt ctattttcag cacaaacggc taaattttta gccgtttttt
     5401 atttgttaca gctatggcaa aactctattt ttactactcc tcaatgaatg caggcaaatc
     5461 tactactctg cttcaatctt cttataatta ccaagaacgt ggaatgaaca ctttagttta
     5521 taccgccgct attgatgacc gtttcggtgt ggggaaagtc aactctcgta tcggtatttc
     5581 acaagaagcc aatttattta ccgctgatac caatctattt gcggaaatta aggcattaca
     5641 ctcaaacaaa gcgttacact gtatcttgat tgatgaggct cagtttttaa ctaaaacaca
     5701 ggtttatcaa ttaagtgatg tggtcgataa actcaaaatt ccggtgcttt gctacgggct
     5761 acgcaccgat ttccaagctg aattatttga aggtagcaaa tatttgttgg cttgggcaga
     5821 tgagctggaa gaactcaaaa ccatctgtga ttgtggcaaa aaagcccatt ttgtcgttcg
     5881 attaaatgaa aaaggcgaag ccattaaaga cggtgaacaa atacaaatcg gcggcaatga
     5941 tagatatctc tctgtttgcc gttatcatta caaacaaaag ttaggtaagc tataagctac
     6001 aagaagcagc aagcggttaa attttcggga atttttgcaa attttcagcg aaatttaacc
     6061 gcttgtttgt gttatttacc tctctttact ttcctgcaaa ccgaatttgc tcactcattt
     6121 gtctcatcac actcgaagtc tcggcaaaaa actgttggta agaggggcaa aggtagttgt
     6181 ggttttcgct gtttgcttgg gggacgatgc ggtgtttggg gcagccgccg tggcaaagta
     6241 tgcggaattt gcagtttagg caggcttgcg agagttttgc ctgtttattc tgcccgaatt
     6301 ggcgttgggc ggctgatgag acgatctctg ccagctgctg ttggttgagg ttgccgatgt
     6361 ggtaatcggg atagacgaaa tggtcgcaac tgtacacatc gccacaggct tccaccacca
     6421 gcgagctgcc acaggtcggg cggaatacac agttgttgga gggatagcca agccattgcc
     6481 cgagcaggtt atcaaactcg atcacaaaaa tctgcccacg gtcaggcagc cattcgtgaa
     6541 aaacatccac taaaaattgc ccgtagcctt ggggcggaac ggaaaagggt tgtaattccc
     6601 ccttgtggct ttccaccacc ggaatgaact gcatataacg gctaccgagg gctttgaggg
     6661 cttgataggt ttctctgccc cgttgccagt tgcggtcgtt caccaccgtg agggtgttaa
     6721 attccacgcc aacctctttc aataaatcga ccgcactttt cacccgttca aaggtcggtt
     6781 taccgttggt ggaaatgcgg tagcggtcgt gaatgtcgct cagtccgtca atggataagc
     6841 ccaccagaaa atgattctct ttgaaaaagc tcgcccactg gcggtttagg gcaatgccgt
     6901 tggtttggat tgcgttggtg atctgcttgc cgtttgcaaa tttttgttga tatttgaccg
     6961 cttgtttgta gaaatctaag cccagcaggg tcggctcgcc cccctgccac acaaaatcca
     7021 cccgttggct ttggttggct tcaatgtaat gacgaatgta gttttgcagc gtttcatcgt
     7081 tcataaactg cgatttttct ggcggaatgg tctgttcctt gctcagataa aaacagtact
     7141 cgcactgaat attacagtga aaactgctgg gttttgccat taggtggaag taggtggtgg
     7201 tcattgtatc tctaaattgt aggggcggac tttatgttcg cccattgttt acattaattt
     7261 tcgggcgggt ataaaacccg cctctacaaa caattatatc tcatcaataa tccgatacac
     7321 ccaattttcc agtgggtcgt tgaggcgttt catttcctgt cgcatttctt ccaacatctc
     7381 ttttttcacg gcttggtagg cttcgtcata aaagaggttg tgcatctctt cggggtcttt
     7441 tctgacatcg tagagttcgc agcggtcggt ggcgttgaag accaatttgt aatccttacg
     7501 ccgccacatt cgctgttcaa aatagacaaa atgccctgcc agttggcaca acaagccttt
     7561 gcggtcgttg ttttggcttt gtctggttat cggcagaata ctctcgcctt ggaaagcggt
     7621 cgggatcggt tgatttgcca catcatacac ggtggaagtg agatcgtgca aataaacgag
     7681 gttgtcatcg acttcgttca cccttgtaga gtgcggatct ttaataatca gcggaatgtt
     7741 gtaggtggtt tcaaacataa actcgccttt ttcgatcatc ttatgcgccc ccatcgcatc
     7801 gccgtggtcg gcggtagcaa cgaggaaggt attttcatag agattgttct cttccaagaa
     7861 acggaacagc tcgccaatgg catcgtcaat cagcgtgatg tagccccaga atttagaaat
     7921 cacctctttc caacgatctt cgctcgcctc ccacattccc cacatttgtg aaatggtgcg
     7981 gaagtggttc ggtttgccct caagcggttt gaagaaactc tcgtccaata ccacttggct
     8041 tgggtcatac attgaataat acggctccgg cactacacac ggagtgtgcg gcccccagaa
     8101 gttgatccac gcaaagaacg gttttttctc atcaagggag gcttgaatgt attttttcgc
     8161 ctcgtcaatg ataaaccact ctattgtctg ctcgcgactg ccggaaagca aaccacagag
     8221 ttcctgcaca cgcaggtgtg gattgtcgcc aaaataggct cgactgactt cgggtgcgtc
     8281 atagcccttt tccgccagcc attcacgata acggttggag tgtgttggcg gctgattaaa
     8341 cacgaggttt ttatacactt ggctgcccgg gtagccatag ccgtcaaagt tatgaccggc
     8401 gatgccataa tcttcgggaa cggattttgt accaacgtgc catttgccga tcacaaagga
     8461 gttatagccc tccacgccgg caatattagg gttttgttgt ggaatttcgc ctgtgccgcc
     8521 tttttcgccg tttttgataa tcccgtggct ggacggcatt aagccggtaa acagcgaggt
     8581 gcgagccggc ccgcagaccg aagccggcgt aaaggcgttg ttaaaccgaa tgccgtcttt
     8641 cgccaagcga tccaaattcg gggtttttac cacctgatgc ccgtaagtgc cgagcatatc
     8701 tttacgcact tgatctaaca aaatatagat gatgttattc ataatgacct ctttaaggct
     8761 tgttaataac cgataaatta tcaagtttcg gagatctgtt cccctcttta gcaaagaggg
     8821 gatttttgat ctcgagcctt ttccgttctt ggtattttta tactaatgag gagaaggctc
     8881 acattcattt aattcaccgc ctttttgcct ttacattttg caaaaaacac gacacaaacc
     8941 accgcttgta gcacagcata caccgccagc accattgccg gattgccgtc tggtgaggct
     9001 aaaccgagcg gagagaggaa agcgtatagc gtgaataagc ccaacacgat agaagccact
     9061 gccagtgggg catattccca gctggttaag tccacattgg cgtggttgat tttgttgtct
     9121 tcgtatggag tcgcacgttt taggaaaatt cctaaaatca gcattaacgc cacatcgaac
     9181 acgaacaagc cagcttgcac atacacgaag ttgattttta catcaaacac ccaaacgatg
     9241 cagaagtaga gaataacgtg tgcgagtaag gcaatgcgtg cggctttgcc tgagacggtt
     9301 ttgttgaata agccgatgac aaacagtgcc acaatcggaa tgttcacaaa accggcgaaa
     9361 cgtttggtca gcaagaaaat accgtctgtg ccgaacatca gtaacggccc aaagatcatc
     9421 gtaatcaccg ccattaccgc agagactttt ttcgcataac ttatcagttc cgcatctgtg
     9481 aactgttttt tgctgataga cggcagtaag tctttacagt aaatggttgc cgctgagttt
     9541 aagaacgagt tgaaggtact caaaatcgcc ccgaacagtg cggcaataaa gaagccttgt
     9601 agcacggttg ggaaagtttt attcactaat tcagggtaag acacatcaat cggtttcaag
     9661 ccctcaccta aaatatggaa actgagtaag cccggtaagt ttaagataag cggtagcaat
     9721 aataagaaca gtgccgcaat taagatccct ttttgaccgg cttttaagtc tctcgccccc
     9781 aaggcacgtt gcacaatggc ttggttggtc gtccagtaga agaaatgcac caccataata
     9841 ccggtgaaaa tggtcggcca aggcactgca tcggtggcac tacccaccgc attccatttt
     9901 tcaacgtgag tagtggtgat gattttcacc ccttctgcca tactgccatt acctaaatag
     9961 ataagtgcaa acaccggcac taataatgcc ccaatgacta acaagaccgc attccaagtg
    10021 tctgacaccg ccaccgcttt taagccaccg aaaatggcat aaatcgcccc aacaatacca
    10081 atcgcaatca ccgtataggt aatcgctgcc ccatagctta agccgaaggc agtttcaagg
    10141 ttgaagattt tattgaaggc aatcgcaccg gtgtaaagtg cagtcggaat gacgatgaaa
    10201 agatagaaca ccaaaaacaa gcccgacata atcaaacggg tttggcggtc gaaacggttt
    10261 tcaaagaact ccggaatggt ggtataaccg ttgcggatat atttcggcaa cagataaagt
    10321 gccaagaagc aaagcggaat taccgccggc acagtccacg caataattga gaaattaccg
    10381 gcataagagt tggcattcac gccgataagt tgctcggtag aaagggaggt taagaccatc
    10441 gaacagccga taaccgtagc actcaagcca cgccctgcca agaaataacc tttagatgtc
    10501 gaaagatcgt cgtttctggt ttttagccaa gagatatacc cgactaatcc agttacaacc
    10561 agaaaggtaa ttattgttaa taacatattc ttcacctcaa tatgactata taaatgatat
    10621 atcccattag agacggcaat agcataaatc ttatttttaa cgatagaata tgatgtttgt
    10681 cataatagat atgtgatggt gatcacaact atgaataatt tatgacaatt taactgattt
    10741 tctttaattc tcgccttaat cgaatggctg tttcggtttc acaacctgca aattcggcga
    10801 tttcacggtt agtccagtga taattgggat aacgttggtg taaataatga atactgttca
    10861 ttacccgctc ttgcgttttt tgataggaaa ccattgataa acgatgctct gcgtcttgta
    10921 attctgtcga gagctgtttt aacagagaga taattaaggc ggaattattc gaccaaaact
    10981 caatgaaatt taagggggta atacgtatca attctgccgg ctgtaacacc cgagccgagc
    11041 aatggtagcg attatcgcca aaaaaggttc taaacccaaa ataatcgttg gctttatata
    11101 ccctcaccaa gctctcttta ccattttcaa gcatatggta cagccctatt aatccgcttt
    11161 ttaaaaaata aaattctctg gcgtgataac cctgagaata aatgacgact cctttttcta
    11221 gatcagacat tacacttaat tggcaagaca tcaattgttc gggggttggc atattgttca
    11281 ttgattatcc ttattatttt attttttcca tatatgattg cgatcataat cctttattta
    11341 gaaaattttg catacttatc acactttagg agatggatta tgacaatgac cgtgataatt
    11401 attttgatca tttgtggcat tatagtcaat atcacttctg cactatttgg gattggcggg
    11461 ggtgttttaa tgatgccgat tttacattca ctgtttcctg aactgcctct ccaagtgatt
    11521 tccgcctgct ctcttaccat tgtgattggt tcagccacta tcaatttatg cttattccac
    11581 catcaacaga taaaaatcaa tcgaaaaaat gtgttgattt ggtcacttgc gatgatgtta
    11641 ggcgtacaaa ttgggtttga actcagtttt cttttctctg ataacagcat tatcgctatc
    11701 tttattctaa ccctgctgac actttcattt aaaaccctat ttcacaaacc aagagttaaa
    11761 gcaatagtac cacctaaacc aaaagaagca gtatctaatg ccacaatgtg cagtttaggc
    11821 ggtttaattg caggtattac cggcattggc ggcggttcga ttatggctcc gattgtcacg
    11881 caaatacgct cggtttcacc gaaacaggtt gcagtttata ctaactatat gatggtgatt
    11941 ggcggaatcg gcaatttata tggctactta tcccgccctt ttgtgttgaa ttcaacctta
    12001 gcaacttggc aaatcggcta tgtgaatttt gcaattgtcg gcaccgtagt gataagttct
    12061 ctctttactg tctatttttc aatgaaatta cgcaatatct tgagtcccga attaactact
    12121 aaattacttg gtgtaatcct attcactatt gcctgttata tgggcttttt gcaatattta
    12181 ttcacttaac cataagttca atagattatt gcttatgagg tagtttttcc caagtaactt
    12241 cattacgcaa atacaccggt tctatttcaa aagcagattg gatattgcct ttttgaatct
    12301 cagtttcagc aatcgaaagc atatatcggc tggaaggcaa ggtaatatca ctgataacaa
    12361 gcggtagatt ttgctcagaa aattgcgaat atgccgccca acctgtgcca accaccacag
    12421 tctcttcact catttggaat tgacttattg cgacttctgg cgaacagact tgttcagcca
    12481 ccacttcatt ccattcttca ccctttcgtt caaattgagc aaagtaaact tcattcattc
    12541 gggcatcaat taaggcaatt acctttgttg cacctaattt ttggtatgct tcttctgcca
    12601 ttgcttttaa gttagaaaca gctaccaccg gcaaattcgc tcccattgcc aacccttgtg
    12661 ccacacttac accgaccctc acaccggtaa aactgcccgg cccacgtccg aatactaaat
    12721 aatttacttc tttgagttcg atattggctt gattaagtaa ttcatctacc atcggcaaaa
    12781 tacgttgagt atgggaacga gggctgattt catctaagaa cgtgatattt ccgttatact
    12841 gtaacgctac agagcaagcc tctgttgcag tatctaaagc aagaatgctg ggtttcatca
    12901 tatgtttagt ttgaataaat taaatttgct ttaaggttaa acaaataaag ggcgaattat
    12961 attcgccctc ggttcaagaa aagattattt tgcaaaattt ctgcgctttt caaccgcttc
    13021 agcaagtgcg aataacgctt tttcactatc ttcccagcca atgcagccgt ctgtaatact
    13081 ttgtccgtaa actaacgcct ctaaaccttt gccttcaatt aagtcttggc gaccttctac
    13141 caagtggctt tcaatcatca cacctgaaat aaagtctgat ccacctgcaa tttggttgca
    13201 cacatcagca caaacgtcca tttggcgttt gaactgcttc tggctgttag cgtggctgaa
    13261 atcgatcatc acgtgtggac gtccgccgga tttctcaatc gcagcacaag ccgctgcaac
    13321 ggagtcagca tcgtagttgg ttgcgctatc gccaccacgc aaaataatgt gacagtcagg
    13381 atttcctgct gttgaaacaa tcgcagaatg cccgaattta gtgaccgata agaaatggtg
    13441 tggcgatttt gcggaagaaa ttgcatctaa tgcaattttc acactaccat tcgtgccgtt
    13501 tttaaaacct accgcacagg ataaaccaga ggctaattca cggtggactt gagattcagt
    13561 cgttctcgcc ccaattgctc cccagctcat aaagtcagcc acatattgtg gtgtaatcat
    13621 atccaaaaac tcgccggcag tcggcacgct taaatcatta atatcagata atactttacg
    13681 ggcaatgcgt aaaccatcgt ttaaggcaaa ggtttcgttc aaataagggt cgttaattaa
    13741 gcctttccaa ccaacggttg tacggggttt ttcaaaatag acacgcatca ccacttctaa
    13801 gttttggtta attttcggat cagcacgcat tgctttaatt ttttgtgcat attctaatgc
    13861 cgctttcggg tcgtgaatgg agcaaggtcc aatcaccact aataagcgat catccgcacc
    13921 gtgtaaaatt ttgtggattg attgacgggt tttagcaacg gtttccgctg caacatcact
    13981 tgccggatag gcttccagta atgcaatagg tggtagtaat tcttcaatac tggtaattct
    14041 gacatcgtca tttttgatat aagacattgt gttcactctc taaataaaat gaaa
//
LOCUS       DANLXO010000072        14058 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.072, whole genome shotgun sequence.
ACCESSION   DANLXO010000072 DANLXO010000000
VERSION     DANLXO010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14058
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.072"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..633)
                     /locus_tag="PXD69_001800"
     CDS             complement(<1..633)
                     /locus_tag="PXD69_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDL6283977.1"
                     /translation="MAEGLLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDL
                     ATVKSGKVANFSANSTACKELAVFAKSAKVRSTLNQRDKYSNDLPYIRFVKSIQTCQC
                     RDGKYCHTEKVLVENKNGAVQLCWHHDKMRMDGEIPNEKLEALADENWEKFIAQQIRL
                     TLRKTQSTAIEFADLVLFASIKGLLDELDSKALQQFLGYPPLNNSGVSKES"
     gene            complement(760..1353)
                     /locus_tag="PXD69_001801"
     CDS             complement(760..1353)
                     /locus_tag="PXD69_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6283978.1"
                     /translation="MTDFDKNTYQTPNYVRNWLNHRYAWFHIDGCSNGQNTLYTYWIG
                     RAADGLDDDKLSCQIADDFLADDLFDVLLDKVSDWGELLRIFVNPPYSDPLPFVQRAA
                     ELKKAGHLVVMLLPADKTTEWYTIIQQHANEVIDIIGYHDEKGTWRTGRIQFINPVTG
                     KPAQGNNKGSMIVVFDPFIEGIVTRQMPLDKIKEWGK"
     gene            complement(1364..2410)
                     /locus_tag="PXD69_001802"
     CDS             complement(1364..2410)
                     /locus_tag="PXD69_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conserved phage C-terminal domain-containing
                     protein"
                     /protein_id="HDL6283979.1"
                     /translation="MRFTSTINNVRLVEWEINITQGALVDLINQASSWAKAVVIDGIT
                     YYWMSFSKVCEELPAVFSKEDTVYRQYKVLKEKGIIDHFKMDGKDYVRLTEKGCEWNK
                     FEPIRESEKNPSIGNNSEQTRKNFRESSEKNPTDNNTNYKNNNDHTTPLNPPAGEPAP
                     AEVVLNYLNSALVTLAVQLGERKPVGYSLKPWAKNITARIRESSVADCCQVVDYLVAK
                     WGRDEKMREYLCPKTIFRQSNFADYFPKSTAWANNGKPVCVNGKWVTPAELEKRLIMP
                     TVDEVRALFQKSLSGNPFKALDFTNKRNLVMYHATINTRNKRPLERDLPMIISQEIKN
                     AVERIDRLRVPTFS"
     gene            complement(2407..3090)
                     /locus_tag="PXD69_001803"
     CDS             complement(2407..3090)
                     /locus_tag="PXD69_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein/antirepressor Ant"
                     /protein_id="HDL6283980.1"
                     /translation="MNQLLNISAPKASITMSSREIAELCEKEHRHVTRDIEAMFSQLD
                     IPAEGYAHFWTHPQNGQTYREFRLPYDLTLTLISGYSVILRKKIIDRWQELESRQGIP
                     QSFSQALRLAAEQQEVIEQQNHQLAIQAPKVAFVEHYVEVGTTKSLRETAKILNFPEK
                     RLIECLERYRVLYRQSGNLLPYQDKQAKQLFAVKTGTAEHGHNFTQTRVTAKGIEWIA
                     QRYASELGQ"
     gene            complement(3148..3336)
                     /locus_tag="PXD69_001804"
     CDS             complement(3148..3336)
                     /locus_tag="PXD69_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL6283981.1"
                     /translation="MKKDDVLEHFGTLEKVAATLGISVSAVSQWGEIIPEKNAYRLQE
                     ITAGKLKVKHSLYRNRSK"
     gene            3461..4117
                     /locus_tag="PXD69_001805"
     CDS             3461..4117
                     /locus_tag="PXD69_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6283982.1"
                     /translation="MNTQTLGDRIKSRRKELKLTQKDLATALKGVSHVAVSQWESSTT
                     KPNSENILDLSTVLQCDISWLLRGNGESNVLPASLGMTKVPLISYIQAGQWTGIDDFR
                     ETCGDYEYILTDLEVSEDAFALEIKGDSMEPDFIEGDRVIIDPDVQPHAGEFVAAING
                     DYEATFKKYRPLEDLDEYGRQHFELIALNPDYHKLSTLKQEIRIIGTMVEHRIYRRKR
                     "
     gene            4129..4503
                     /locus_tag="PXD69_001806"
     CDS             4129..4503
                     /locus_tag="PXD69_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283983.1"
                     /translation="MTEFKDVKQAIVEAQLASTPKDKVVNDIMKGSAELLSANDIINR
                     LGIGADEFQELVNLPNHYLRINGGLGAAVYNTRRMFDTHVELVNQELEKNISFPKPDL
                     YILGKARWKKETFKKWLEEQCR"
     gene            4655..5392
                     /locus_tag="PXD69_001807"
     CDS             4655..5392
                     /locus_tag="PXD69_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL6283984.1"
                     /translation="MLSKQVLSISESRLSTYLFCFFRNDPTKQKEAIAIYTALQHRTG
                     IYFSLIQEIEVALRNEVSQLLRFAAPNHNLYEFFHFLANDSNAPLNAESKRQLQKAIS
                     ECGRNYNENDIISHISFGFWVNLFNYDIKRNQYVAYWQSVLKPIFGHRFSNFKDLYNT
                     LKQIMRFRNRLYHQEVVWNKRIAKKPTHALENLEKTYKQFELALQKIAPERFAFRQLS
                     QALIWQRQIFFDQQIFEAEIVILPQHI"
     gene            complement(5428..6024)
                     /locus_tag="PXD69_001808"
     CDS             complement(5428..6024)
                     /locus_tag="PXD69_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283985.1"
                     /translation="MKKLLMTLCCLPAFALANETGESCSKIEDSAKRLECYDSVFVKK
                     DTGKDEATDEKSNWEYEQKKDELRNATTYFAKIRSTNTIDFGFPYNSSSMNLMLRKDP
                     KYGNDVIFSVHGQFNGCMIESCKITVKFDDGKLESYRMIGADGGSNDTLFIENAKAMK
                     TFVDKLKKSKKLIVEASFYNYGKGQFTFDTQGLEWKHF"
     gene            6670..6855
                     /locus_tag="PXD69_001809"
     CDS             6670..6855
                     /locus_tag="PXD69_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283986.1"
                     /translation="MNKMKQLAPFALLILLLGIVGRMDYDDHIQMQRYKCERNQGFWQ
                     MESNGNQYCGGKYGTKN"
     gene            6839..7036
                     /locus_tag="PXD69_001810"
     CDS             6839..7036
                     /locus_tag="PXD69_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283987.1"
                     /translation="MARKIDAGVEIVEVDKRFIAKFFYDGKLQHTTYPQYNRQNAIML
                     INRKIERFNIGRDKPIKLYKE"
     gene            7039..8013
                     /gene="ssb"
                     /locus_tag="PXD69_001811"
     CDS             7039..8013
                     /gene="ssb"
                     /locus_tag="PXD69_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL6283988.1"
                     /translation="MAGINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDKTS
                     GEKKQATEWHSIIAFRNLADIIGKYLKKGSQVYVEGKLRTRKWQAQDGTDRWTTEIIA
                     DQLQMLGSSNSGNSNNNWATEPAGNPPPTNPYNHVMTDSESRDFDDDIRVRWITKEQA
                     KQFINNISTDWMKTICSFALLTGARRTEILSMTWDKIDFIRKVAIVSNDIAKSEKARS
                     LLLNDDAIELLQKQRGKNPKYVFVGSKGQALQDINRKIFNKATEKCLLVDFHFHDLRH
                     TWASWHVQAGTPLFTLKELGGWETLEMVKKYAHLNADHLLNHANSVKF"
     gene            complement(8100..8176)
                     /locus_tag="PXD69_001812"
     tRNA            complement(8100..8176)
                     /locus_tag="PXD69_001812"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8140..8142),aa:Arg,seq:tct)
     gene            complement(8201..8277)
                     /locus_tag="PXD69_001813"
     tRNA            complement(8201..8277)
                     /locus_tag="PXD69_001813"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8241..8243),aa:Pro,seq:tgg)
     gene            8447..9307
                     /gene="folD"
                     /locus_tag="PXD69_001814"
     CDS             8447..9307
                     /gene="folD"
                     /locus_tag="PXD69_001814"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDL6283989.1"
                     /translation="MTAQIISGSEVSSQIKKKVSEKIAHYLEQGKRNPGLAVILVGND
                     PASQVYVGSKRKSCAEIGIASKSYDLPEETTEAELLALIEKLNQDDSVDGILVQLPLP
                     KQIDSTKVIEAILPHKDVDGFHPYNVGRLSQRIPTLRPCTPYGVMKLLETTGVDLYGQ
                     HAVIVGASNIVGRPMALELLLGGCTVTVTHRFTKDLEHHVRQADILVVAVGKPEFIPG
                     EWVKDGAIVIDVGINRGADGKLKGDVEYSVASQKAAFITPVPGGVGPMTVAMLMQNTL
                     QTYENHLQAV"
     gene            9421..10872
                     /gene="thiI"
                     /locus_tag="PXD69_001815"
     CDS             9421..10872
                     /gene="thiI"
                     /locus_tag="PXD69_001815"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDL6283990.1"
                     /translation="MKFIIKLFPEIMIKSDSVRKRFIKILTSNIRNVLLKETENVSVV
                     RHWDFIEVRAKVDEETALVLDLLKRTPGIHHILEVEETPFTDMHDIFEQTYAAVKAEL
                     EGKTFSVRVRRKGKHDFRSLDVERYVGGGLNQRIETAKVKLTNPDVTVRIDIEHDKML
                     LIKARHEGLGGYPIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGAAHEI
                     GVKQMAYHIWSRYSTSHKVRFIAINFENVVGEILEKVDNGQMGVVLKRMMVRAASRIA
                     ERFDIQAIVTGEALGQVSSQTLTNLRLIDKASDTLVLRPLITHDKEQIIAMAKAIGTD
                     DIAKSMPEFCGVISKNPTVKAIETKILEEEGNFNFEVLEQAVQTASYLDIREIAQQTE
                     KEVVSVETTTELSKNDVVLDIRSPEEVDEKPFRLDGVEVKELPFYKLSSQFSTLDQSK
                     TYLLYCQRGVMSKLQALYLKENGYSNVKVFRVK"
     gene            complement(10917..11624)
                     /locus_tag="PXD69_001816"
     CDS             complement(10917..11624)
                     /locus_tag="PXD69_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwiC-like family protein"
                     /protein_id="HDL6283991.1"
                     /translation="MFKEKPVISNQHGALAMAMLPFLYAVIESGFSTLHIFFGLSWLF
                     LYFFSYPFLSLFSKKPTERNKKWAKIYFGLSILFALPLIYAQPSILQFLPIILPLGLV
                     QVHYAKQKDERNLWNDIAGILTFGIMGMAAYYLVTKQYQFEILLHPTLFFIATTFYIK
                     SMVRERRNPIYMEISIAIHLVLAMLYILCSLQAVFFAYLIATARAIIVPSFGWNVKQV
                     GMLEFPVILLFLASLIW"
     gene            complement(11692..12666)
                     /gene="pfkA"
                     /locus_tag="PXD69_001817"
     CDS             complement(11692..12666)
                     /gene="pfkA"
                     /locus_tag="PXD69_001817"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDL6283992.1"
                     /translation="MSKKIKKIAVLTSGGDAPGMNAAIRGVVRTALNEGLEVCGIQDG
                     YYGLYHDKVIPLDRRSVSETINRGGTFLGSARFPDFKRPEVRKHCVETLKKYSIDALV
                     VIGGDGSYMGAKLLTEEFGYPCIGIPGTIDNDIVGTDYTIGYQTALETALDAIDRLRD
                     TSSSHQRISIVEIMGRHCGDLTLSAALAGGCEYVIVPEKGLDKDALMRSIEEGFHKGK
                     RHSIIAITELMTDVHALAKEIEARFGNETRATVLGHIQRGGSPCAFDRILASRMGVYA
                     VELLLQGFGGHCVGIQNEQLVHHDIIDAINNMRRPFKEELFEASRKLF"
     gene            complement(12773..13969)
                     /locus_tag="PXD69_001818"
     CDS             complement(12773..13969)
                     /locus_tag="PXD69_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDL6283993.1"
                     /translation="MLNTQFRTHFPFFEKSDGWTYLDSAATTLKPDVLIEATSEFYAS
                     AGSVHRSQYDLPQTEQYELARDLVAKRFNVETREAVIWTSGTTQSINTVAYGLEHQIA
                     AGDEIVISVAEHHANFIPWQQLAQRTRAKLVVLPLNDKYEIELETLKNALSEKTKIVA
                     FNLVSNVTGVRQPAEQIIPLIRQSCSAKIVLDIAQAVCSEQVDVQKLDADFYAFSAHK
                     MYGPNGVGVLTGKLQSLEQIQPLVFGGKMLKNITESELTVAELPYRLEAGTPNIAGII
                     GFGQVLAWLEKWDFVALNHQLYDLAEYTCKRLNSYQNLQIIGQQNTPTISFVVKNQHP
                     ADIAAFLTQSKIAIRQGEHCAKPYLRHLEEVGTVRLSLAHYNNQQDVEHFFNALDFTL
                     EILQES"
BASE COUNT         4277 a         2792 c         2848 g         4141 t
ORIGIN      
        1 actttctttg ctcacaccgc tattattcag tggtggatag ccgagaaact gctgtaatgc
       61 cttgctgtct aattcatcaa gcaaaccttt gatactcgca aacaacacta agtccgcaaa
      121 ttcaatagcg gtagattgcg ttttgcgtaa ggttaagcgg atttgttggg cgataaattt
      181 ttcccagttt tcatccgcta gtgcttctaa tttttcattc gggatttcac cgtccattcg
      241 cattttgtcg tgatgccaac aaagctgtac cgcaccgttt ttattctcta ccagcacttt
      301 ttccgtgtgg caatatttgc catctcggca ttggcacgtc tgaattgact ttacaaaccg
      361 gatataaggc aaatcattac tatatttgtc acgctgattt agcgttgaac gaacttttgc
      421 cgatttagca aacaccgcca gctctttaca agcggtcgaa tttgccgaaa aatttgcaac
      481 cttgcctgat ttaaccgtcg ctaaatcggt cggtgcaggt tgcaacaaag ttcgctcacc
      541 gaaagcagca ggagaaacat ctttaggcac tttgtaaaac acaataccca cttcggtttg
      601 aaagtaaggg gtaagtagca aaccttccgc cattattgcc cccatttctc ggtttcatca
      661 taggctttca cgaatagcat aaatacgcca atacagatta aaaaaatcag tacgccaatt
      721 actgcaccaa taccaataaa tagttcccaa taatccattt tatttacccc attccttgat
      781 tttatctagt ggcatctgac gagttacaat gccctcaata aatgggtcaa acacaacaat
      841 catcgagcct ttattattac cttgtgccgg tttacctgtt accgggttga taaattgaat
      901 ccgccctgtc cgccaagtgc ctttttcatc gtgatagcca ataatatcaa ttacctcatt
      961 agcgtgttgt tgaatgatgg tgtaccattc tgttgtttta tccgctggta ataacatcac
     1021 aaccaaatga cctgcttttt tcaattctgc cgctcgttga acaaaaggca gtggatcaga
     1081 atatggcgga ttaacgaaaa tacgcagtaa ttctccccag tctgaaactt tatctagtag
     1141 cacatcaaat aaatcatcgg ctaaaaaatc atcggcaatt tggcaactta atttatcatc
     1201 atctaaaccg tctgccgctc taccaatcca ataggtgtac aacgtatttt gtccgttaga
     1261 gcaaccgtca atatgaaacc aagcataacg atgatttagc caattacgca cataattagg
     1321 tgtttggtaa gtgtttttat caaaatctgt cattgtctaa tccttacgaa aatgttggta
     1381 ctctcaaacg gtcgatacgc tcaaccgcat ttttaatttc ttggctgata atcatcggca
     1441 aatcacgttc aagtggtcgc ttgtttctgg tgttgattgt ggcgtggtac atcactaaat
     1501 ttcgtttgtt ggtaaagtcc aatgccttaa acggattgcc actgagtgat ttctggaaca
     1561 aggctcgtac ttcgtccacc gttggcataa tcaagcgttt ttccagctcc gccggtgtaa
     1621 cccacttacc atttacgcaa acaggctttc cgttattagc ccaagcggtc gattttggaa
     1681 aataatctgc aaaattcgat tggcggaaaa tcgttttcgg gcagaggtat tcacgcattt
     1741 tttcatctcg tccccattta gcgacaaggt aatccaccac ttggcaacag tccgccaccg
     1801 aactttcacg aatgcgagca gtaatatttt ttgcccacgg cttgagcgaa taccccacag
     1861 gcttacgctc accaagctgt accgccaacg ttaccaaagc cgaattgaga taattcaaca
     1921 caacttcagc cggggcaggt tcccccgctg ggggattaag gggggtagta tgatcattat
     1981 tatttttata attagtatta ttatctgtcg gatttttttc cgagctttct cggaaatttt
     2041 tccgagtttg ttcggagtta tttccgatac tcggattttt ttccgactca cggatcggct
     2101 cgaatttatt ccattcacaa cctttttcgg ttaaacggac ataatcttta ccgtccattt
     2161 tgaagtggtc gataatgcct ttttctttca acaccttata ttggcggtaa actgtatctt
     2221 ctttgctaaa aaccgcaggt aactcttcgc aaaccttgct aaatgacatc cagtaatagg
     2281 ttatgccgtc aataaccacc gctttcgccc aactggaggc ttgattgatt aaatcgacca
     2341 atgccccttg tgtaatattg atttcccatt ccactaagcg gacattgttt atggttgatg
     2401 taaatctcat tgtcctaact ccgatgcgta acgttgagca atccattcaa tccctttggc
     2461 ggttactctc gtttgggtaa aattatgacc gtgttctgcc gtgccggttt ttactgcaaa
     2521 aagctgttta gcttgtttat cttgataagg gagtaggttt cctgattggc gataaagaac
     2581 tcgatatcgt tctaaacatt caatcaaccg cttttctgga aaattgagta tcttggcggt
     2641 ttctcgcaat gatttagtcg ttcccacctc aacataatgc tccacaaatg cgactttcgg
     2701 ggcttgaatg gctaattgat gattctgctg ctcaatcact tcttgctgtt ctgccgccaa
     2761 ccgtagagct tgagagaaag attgtggaat accttgtctg ctttctagct cttgccaacg
     2821 gtcgataatt ttcttgcgaa gtatcacgct atagccggaa attagggtaa gggttaaatc
     2881 gtaaggcaat cgaaattccc ggtatgtttg cccattttga gggtgtgtcc aaaaatgggc
     2941 atacccctcg gcaggaatat ctaattgact aaacatcgct tctatatcac gagtaacgtg
     3001 tcgatgttct ttttcgcaca actcagcaat ctcacgacta ctcatcgtaa tgcttgcttt
     3061 tggtgccgaa atgtttaata attgattcat cgaaaatacc tttcgtgttt aattatgtat
     3121 gaaagccacc gttacagcgg tggtttttta tttgcttcta tttctataaa gtgagtgttt
     3181 gacctttaac ttgccggcag tgatctcttg taatctgtac gcatttttct caggaataat
     3241 ctcgccccat tgagaaacag cagatacact aatccctaaa gttgccgcca ctttttctag
     3301 agttccgaaa tgttcgagca catcatcttt tttcatattt tcttaattcc tttcttgaat
     3361 tttatttaag acctcttaaa tatacaatta aaggaaactt aagtcaataa atgttaagat
     3421 aacttaacag caactttatt tttaccttta aggggatact atgaatactc agaccttggg
     3481 cgatagaatt aaaagccgta gaaaagaatt aaaattgaca cagaaagatc ttgctactgc
     3541 gttaaaaggg gtctcacacg ttgcagtatc tcaatgggaa agtagtacga ctaagccaaa
     3601 ttcagagaat attttggatt tatctacagt attgcaatgc gatattagtt ggctcttgcg
     3661 tggtaatgga gagtctaatg ttctacctgc tagcctcggt atgactaaag tcccattaat
     3721 tagctatatt caagccggac aatggacggg aattgacgat tttcgtgaaa cctgtgggga
     3781 ttatgaatat atcctaactg atcttgaggt gtctgaagat gcttttgccc tagaaatcaa
     3841 aggggactcg atggagcctg attttattga aggagaccga gtaattattg atcctgatgt
     3901 acaacctcac gccggtgagt ttgtggcagc aattaatggc gattatgaag ccactttcaa
     3961 aaaataccgt ccgttagaag acttagacga atacggaaga caacattttg agcttatcgc
     4021 tcttaatccg gattaccata aattatcaac gctaaagcaa gaaatcagaa ttatcggcac
     4081 aatggtagag catcgtattt atcgtagaaa gagataggaa ttgataatat gacagaattt
     4141 aaagatgtaa aacaggcgat tgtagaagct caattagctt cgacacctaa agataaagtc
     4201 gttaatgaca taatgaaagg aagtgcggaa ctgctttcag caaatgatat tatcaatagg
     4261 ttaggtattg gggcagatga gtttcaagag ttggttaatt tacctaacca ttatttgcgt
     4321 ataaatggag ggttaggtgc tgctgtgtat aatacaagaa gaatgtttga tacccatgtt
     4381 gagttagtca atcaagagtt agaaaagaat atttcatttc ctaaacctga tttatatatt
     4441 ttggggaaag ctcgttggaa aaaagaaaca tttaagaaat ggttggaaga acagtgtaga
     4501 taaagaaaag gtaggttaaa aaacctacct tttctgaacc gcaaataagc gattctcaca
     4561 ctttacaaag caatccagct cctacgtctg gggcttcggg tccgttgcca gtgcaagtat
     4621 tattacatta aactaaactt gagtaaagga aaatatgttg tccaaacaag tgctaagtat
     4681 ttcagaaagt cggctgagta catatttatt ttgctttttc cgaaatgatc ccacaaaaca
     4741 gaaagaagct attgcaattt ataccgcctt gcaacatcga acaggaattt atttttcatt
     4801 gattcaagaa atagaggtgg cactaagaaa tgaagtcagc cagttgttac gctttgctgc
     4861 acctaatcat aatttatacg aattctttca ttttctagcg aacgatagta atgctcctct
     4921 taatgcagaa tctaaacgcc agctacaaaa agccattagt gaatgcggac gtaactataa
     4981 tgaaaatgac ataatttctc atatttcttt tggattttgg gtaaatctgt ttaattatga
     5041 tataaagcgt aatcaatatg ttgcttactg gcaaagcgta ttaaagccta tttttggaca
     5101 tagatttagt aattttaagg atttatacaa tacattaaag caaattatgc gttttagaaa
     5161 tcggctgtat catcaagaag tggtttggaa taagcgaatt gccaagaaac caacgcacgc
     5221 actagagaat ttagaaaaaa cttacaagca atttgagtta gcactacaaa agatagcacc
     5281 tgaacgattt gcgtttcgtc agctttcaca agcacttatt tggcaacgcc aaatcttttt
     5341 cgaccaacaa atttttgaag ctgaaatcgt tattttgccc caacatatct aagcaaaaag
     5401 ctacgcatct atgtagcttt ttcttaatta aaaatgtttc cactctaacc cttgtgtatc
     5461 aaaggtaaat tgccctttgc cataattgta aaaactcgcc tctacaatta gttttttcga
     5521 ctttttcaac ttatctacaa aggttttcat tgcttttgca ttttcaatga aaagcgtatc
     5581 attgctgcca ccatccgccc caatcattcg ataactttcc aatttaccat catcaaactt
     5641 cacagtaatt ttacagctct caatcataca gccattaaat tgaccgtgta cgctaaaaat
     5701 tacatcattg ccatatttag ggtctttgcg taacattaaa ttcattgatg atgaattata
     5761 cgggaaacca aaatctattg tgttagttga tctaatttta gcaaagtaag tcgttgcatt
     5821 acgcaattca tctttctttt gttcatattc ccaattagac ttttcatcgg tagcttcatc
     5881 tttaccagta tcttttttca caaagacact atcataacat tctaagcgtt ttgcactatc
     5941 ttcaatctta gagcaacttt ctccagtttc gttagctaaa gcaaaagcgg gcaaacaaca
     6001 taaagtcatc agtagttttt tcatataacc tccatagaaa tcccttctta ttttctcaaa
     6061 agcgtggttt tcggtctgtg atcaagctcg caatctcaat aattatattt taatggttta
     6121 aaaaacaatc aattaagaaa tcataactaa ttgaaattta agaaatctta aaaatactta
     6181 ttaaataagc ttaaattttg attgacttgt aatttaagtt ttcttaaact taattcatca
     6241 aaacgagcta cggctcaatg ctctttaaca attcggtgct tgtgcggacg atattaacaa
     6301 cctcgggcag ttgtaaagta atgctttata actcagtaag gttggttaga ccctgacata
     6361 caaatttgaa cgacttgcca aaaagaggtg gcaaggttta ggcaacacac tcgcaaggtg
     6421 tggagagctg aaaaggcaac actggtatca gtcctaagca atcacgctta tctcaagttt
     6481 gagtaagtac ggatacaagc agcacccgac ggaatggcga aagccgggcg ggcgacggcg
     6541 tgggcagaca cgcatttatt ccaaagctca tttcaccaag tgtgtttcgg aatacccaca
     6601 actagacgca agtcgctcca tttgcccacc gtaaaacgtg ggcttttttt aaccctaaag
     6661 gacaatccta tgaacaaaat gaaacaactt gccccatttg ccttgctaat tttgctatta
     6721 ggcattgtcg ggcgaatgga ttatgacgac cacatacaaa tgcaacgtta caaatgcgaa
     6781 cgaaatcaag gcttttggca aatggaaagc aacggcaacc aatactgcgg agggaaatat
     6841 ggcacgaaaa attgatgccg gtgttgagat tgttgaggta gataaacgat ttatcgccaa
     6901 gtttttttat gacggcaaat tacagcacac aacctatcca caatacaacc gccaaaacgc
     6961 aattatgttg attaaccgca aaattgagcg gttcaacatt ggcagagaca aaccaatcaa
     7021 actttataag gaataacaat ggcaggaatt aacaaagtga ttattgtcgg tcgcctaggt
     7081 aacgacccgg aactacgaac aatgccaaat ggcgattcag tcgccaaaat cagtgtagca
     7141 acttcaaccg aatggacgga taaaacctca ggcgagaaaa aacaagccac agagtggcat
     7201 agcattatcg cctttcggaa tttagctgac attatcggca aatacctgaa aaaaggctcg
     7261 caagtgtatg tggaaggcaa gctacgcact cgcaaatggc aagcccaaga cggcacagac
     7321 cgctggacga ccgaaatcat cgccgatcag ctacaaatgc tcggtagctc aaacagcgga
     7381 aacagcaata ataattgggc aaccgaaccg gcaggaaacc caccaccaac caatccatat
     7441 aaccacgtaa tgacggattc agaatcacga gattttgatg atgatatccg ggttcgttgg
     7501 attaccaaag aacaagccaa gcagtttatt aataatatta gtactgattg gatgaaaact
     7561 atctgctctt ttgctttatt aacaggagca aggcgaacag aaatactttc tatgacttgg
     7621 gataaaatag attttatccg taaagtagcg attgtttcga atgatattgc caaatctgaa
     7681 aaagcgagat cgcttttact taatgatgat gcaattgaat tattacaaaa gcagagaggg
     7741 aaaaatccta aatatgtttt tgtaggaagc aaagggcagg cattacaaga tattaaccgc
     7801 aaaatattta acaaagcgac tgaaaaatgt ttattggttg atttccattt ccatgattta
     7861 aggcatactt gggccagttg gcacgttcag gccggcacac cattatttac cttaaaagaa
     7921 ttgggtggct gggaaacatt agagatggta aagaaatatg cccatcttaa tgcagaccat
     7981 ttactcaacc acgctaactc agttaaattc tagtcacaaa ttagtcacaa agtatttttg
     8041 acataggaaa ttaataactg atatttaaat gtaactattt gaaatataag ggtaattaat
     8101 ggcacgccct aaaggattcg aacctttgac ccacgcctta gaagggcgtt gctctatcca
     8161 gctgagctaa gggcgcagat gaagataata taaaaagaag tggtcggcga gataggattt
     8221 gaacctacga cccactggtc ccaaaccagt tgcgctacca agctgcgcta ctcgccgaca
     8281 taagatgttg ttgattatag atttctttgc acaacagtca atcttttttt gtgaatgtcg
     8341 gcttaaatga ttgaagttta tccgttattc aaaattagct tatcaaaaag gctatttttt
     8401 gagagaatga cgaatgtttt gccaagtgat atttcgggag gtagtaatga ctgcacaaat
     8461 tatttcgggg agtgaggttt cttcacaaat taaaaaaaag gtgagtgaga aaatcgctca
     8521 ttatcttgaa cagggtaaac gtaaccctgg tcttgcggtc attttagtgg ggaatgaccc
     8581 agcctctcaa gtgtatgtgg ggagtaaacg caaaagctgt gccgaaattg ggattgcgtc
     8641 gaaatcttat gatttacccg aagaaaccac agaggctgaa ttattagcac tgattgaaaa
     8701 gttgaatcaa gatgattcgg tcgatgggat tttagtccaa ttaccgttac ctaaacagat
     8761 cgattcgact aaagtgattg aagccatctt accacataaa gatgttgatg gattccaccc
     8821 ttataatgtt gggcgtttat ctcagcgtat tcccacttta cgcccttgca cgccatacgg
     8881 tgtgatgaag ttgcttgaaa caactggggt agatttatat ggtcaacacg cagtgattgt
     8941 aggtgcgtct aatattgttg gtcgcccgat ggcgttagaa ttgttgcttg gtggttgtac
     9001 agtcacagtt actcatcgct ttaccaaaga tttagagcat cacgttcgcc aagcagatat
     9061 tttagttgtg gcagtcggca agcctgaatt tattcccggg gagtgggtta aagacggtgc
     9121 tatcgtgatt gatgtaggga ttaaccgtgg agcagacggc aaactaaaag gtgatgtaga
     9181 gtattcagtt gcctcacaaa aagcggcatt tatcacccct gtccccggtg gggtaggccc
     9241 gatgacggtg gcaatgttaa tgcaaaatac cttgcagacg tatgaaaacc atttacaagc
     9301 ggtctaattt tacggatatt ttgcaaatcc tcggcattgg tcgaggattt ctttttctgg
     9361 gctttttcag cagaaaaggc taaaatactt gccattttta ttacacgatc cttattaaat
     9421 atgaaattta tcatcaaact tttccctgaa attatgatta aaagcgactc tgttcggaaa
     9481 cgctttatca aaattttaac ctcaaatatt cgcaacgtat tattaaaaga gactgaaaat
     9541 gtgtctgtgg ttcgccattg ggactttatt gaagttcggg cgaaagtgga cgaagaaacg
     9601 gcattagtgc tggatttgct taaacgcacg ccgggtattc accatatttt agaagtggag
     9661 gaaacccctt ttacggatat gcacgatatt tttgagcaga cttatgccgc agtgaaagct
     9721 gaactagaag gcaaaacgtt tagcgtgcgg gttcgccgta aaggaaagca cgatttccgt
     9781 tctcttgatg tagagcgtta tgtcggtggt gggctgaatc agcggattga aacggcgaaa
     9841 gtgaaattaa ccaacccaga tgttacggtc agaattgata ttgaacatga taaaatgttg
     9901 ctgattaaag ctcgccacga agggttaggc gggtatccaa tcggcacaca agaagatgtg
     9961 ttgtcattga tttcgggtgg ttttgattcg ggtgtatcga gctatatgct gattcgcaga
    10021 ggttctcgtg tgcattactg ttttttcaat ttaggtggtg ccgcacacga aattggcgtg
    10081 aaacagatgg catatcatat ttggagccgt tatagtacct cgcacaaagt ccgttttatc
    10141 gccattaatt ttgaaaatgt agtgggtgag attttagaaa aagttgataa cggacaaatg
    10201 ggcgtggtat taaaacgtat gatggtgcga gcggcaagcc gtattgccga gcgttttgat
    10261 attcaagcga ttgtgaccgg tgaggcgttg gggcaggtct ctagccaaac actgactaat
    10321 ttacgtttaa ttgataaggc atcagatacg ctggtattac gtccgctcat cactcacgat
    10381 aaagagcaga ttattgcaat ggcaaaagcg ataggcactg acgatattgc taaatcaatg
    10441 ccggagttct gtggagtaat ttctaaaaat ccgacggtta aggcaatcga aactaaaatt
    10501 ttggaagaag aaggcaactt taattttgag gtactagaac aagcggttca aacggcgagt
    10561 tatttagata ttcgtgagat cgctcagcaa accgaaaaag aggttgtttc ggttgaaacc
    10621 acaacagaat tgagtaaaaa cgatgttgtg ctagatattc gcagcccgga agaggttgat
    10681 gaaaaaccat tccgtttaga cggggttgaa gtaaaagaac tcccgtttta taaactttcc
    10741 agccagttta gtacgcttga ccaaagcaaa acctacttgc tctattgcca acgtggggta
    10801 atgagtaaac tgcaggctct ttatttgaaa gagaatggct acagcaatgt aaaagtgttt
    10861 cgagtgaaat aatgcctctt tgattgcacc ttaatgattg attaaggtgc aattttttac
    10921 caaataaggc ttgctaaaaa gagtaagatc acaggaaatt caagcattcc aacttgttta
    10981 acattccagc caaagcttgg cacaataatg gctcgggcag ttgcaattaa ataagcaaaa
    11041 aagaccgctt gtagagagca gagtatgtaa agcattgcta aaaccaaatg tattgcaata
    11101 ctgatttcca tataaattgg gtttcttcgc tctcgcacca tactctttat atagaaagtc
    11161 gtagcaataa aaaatagggt agggtggagc agaatctcaa actgatattg tttcgttacc
    11221 agataataag ctgccattcc cattatgcca aaggttagaa tgccggcaat atcattccat
    11281 aaattgcgtt catctttttg tttggcgtag tgaacttgca ctaacccaag cggtagaatt
    11341 atcggtaaaa attgcaaaat cgaaggctga gcgtagatca aaggtaatgc aaatagaatg
    11401 cttaagccaa agtagatttt cgcccatttt ttattgcgtt cagttggctt tttactgaaa
    11461 agtgagagaa aagggtagga aaagaagtag agaaacagcc acgacagccc aaagaaaata
    11521 tgcaaagtgc taaaaccact ttcaataacg gcgtagagaa acggcaacat tgccattgct
    11581 aatgcaccgt gttggttgga tataacgggt ttttctttga acattcaatt tccctcttaa
    11641 tgtggcaaat aaaaaggcga ctaaacagcc gcctttaaat tgtaagaaaa gttagaataa
    11701 ttttctagag gcttcaaata attcttcttt gaacggacga cgcatattat tgatcgcatc
    11761 aataatatcg tggtgaacca actgctcgtt ttgaataccg acacagtgac cgccaaagcc
    11821 ttgcagtaat aattccaccg catagacgcc catacgggag gccaaaatac ggtcgaaggc
    11881 acaaggcgaa ccaccacgtt gaatatgacc taatacggtt gcacgggttt cattgccgaa
    11941 acgtgcttca atttctttcg ctaatgcgtg aacatcggtc atcaattctg taattgcaat
    12001 aattgaatgg cgtttacctt tgtggaaacc ttcttcaatg cttcgcatta atgcatcttt
    12061 atctaagcct ttttccggta cgatcacata ttcgcaacca ccggcgaggg cagcacttag
    12121 ggttaaatca ccacagtggc gacccataat ttccacaatc gaaatacgtt ggtgtgaact
    12181 tgaagtatca cgcaggcggt caatcgcatc taatgcggtt tcaagggcag tttgatagcc
    12241 gatggtgtaa tccgttccca caatatcgtt atcaatcgta cccggaatac cgatacaagg
    12301 gtaaccaaat tcttcggtta ataatttagc ccccatataa gaaccgtcgc caccaataac
    12361 cactaatgca tcaatgctgt atttttttaa ggtttcgaca caatgtttgc gaacttctgg
    12421 tcttttaaaa tcagggaagc gggcagaacc taagaatgta ccgcctcggt tgatggtttc
    12481 agacacggaa cggcggtcaa gtgggatcac tttatcgtgg taaagcccat agtagccgtc
    12541 ttgaatacca caaacctcta aaccttcatt aagtgcggta cgaaccacac cacggattgc
    12601 cgcgttcatt cctggtgcat caccaccact ggttaatact gcaatttttt tgattttttt
    12661 actcatttaa aaacaccttg ttgataaatt aaagttaaat tggaaactgg tgcaaggtta
    12721 caatattcag ccttttcgtt ctactaaaaa atacgtattt ttttgattta gcttagcttt
    12781 cttgcaaaat ttcaagggta aaatctagag cgttgaaaaa atgctcaaca tcttgttgat
    12841 tattgtaatg ggcaagtgaa agtcgaactg ttccgacctc ttctaaatgg cgtaaataag
    12901 gcttggcaca atgctcccct tggcggatcg caattttact ttgggttaag aaagcggcaa
    12961 tatcggcagg gtgctgattt ttcaccacaa agctaatagt cggtgtattt tgttgcccga
    13021 taatttgcaa attttgataa gaatttaacc gcttgcaggt gtattcagcc aagtcataaa
    13081 gctgatgatt aagagcgaca aaatcccatt tttcgagcca agctagcact tgcccaaagc
    13141 cgataatgcc ggcgatattc ggcgtgccag cttccaagcg ataaggtaac tctgccacag
    13201 ttaattcact ttccgtaatg tttttcagca ttttgccgcc aaatacaagc ggttgaattt
    13261 gctccaaact ttgcaatttg ccggtaagca cgcccacacc gtttggacca tacattttat
    13321 gggcggaaaa agcgtagaaa tctgcatcta atttctgaac gtccacttgc tctgagcaaa
    13381 ctgcttgagc aatatctaac acaattttag cagagcaaga ttggcggata agcgggatta
    13441 tttgttccgc tggctggcga actcctgtta cgttagaaac taaattaaag gcaacaattt
    13501 tggttttttc cgataacgca tttttaaggg tttcaagctc aatttcatac ttatcattaa
    13561 gtggcaacac cacgagtttc gcccttgtac gctgtgccaa ctgctgccaa ggaataaaat
    13621 tagcgtgatg ttccgccact gaaattacaa tttcatcgcc tgctgcaatt tgatgctcca
    13681 agccataagc cacggtgtta atactttggg ttgtaccgct tgtccaaatc accgcttcac
    13741 gagtttccac attgaaacgt tttgcgacta aatctcgagc taattcatat tgttcggttt
    13801 gtggcaaatc gtactgactg cgatgcaccg accccgcaga agcgtaaaac tcacttgttg
    13861 cttcaatgag tacatcaggt ttcagcgttg tagcggcaga atctaaatac gtccatccgt
    13921 cagatttttc aaaaaaaggg aaatgggtgc gaaattgggt gttaagcata agttaattcc
    13981 taagagttgt ggaaaattga gttaccaaga aaatacctat tataaaggaa tgttttgagg
    14041 taagaagcat ttcaagaa
//
LOCUS       DANLXO010000073        13746 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.073, whole genome shotgun sequence.
ACCESSION   DANLXO010000073 DANLXO010000000
VERSION     DANLXO010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13746
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.073"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(112..924)
                     /gene="suhB"
                     /locus_tag="PXD69_001819"
     CDS             complement(112..924)
                     /gene="suhB"
                     /locus_tag="PXD69_001819"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HDL6283994.1"
                     /translation="MNPMLNIAIRAARKAGNIIAKGYEQSPQDTQVLQKNTNDYVTEI
                     DKAAEAAIIDVIRKSYPEHSIVTEESGVLNGSNENVQWVIDPLDGTTNFVKRLPHFAV
                     SIAVRENGRTTVGVVYDPIRNELFTAVRGEGAKLNEFRLRIDAERRDLKGTVIATGFP
                     FKVIRHRDAHLNMLEGLMNNGVADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAA
                     GELIAREAGAIVTNFVGGTDYLKTGNLVVGNGRVVKEILNSIQPTLTEELKA"
     gene            1105..2139
                     /locus_tag="PXD69_001820"
     CDS             1105..2139
                     /locus_tag="PXD69_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA methyltransferase"
                     /protein_id="HDL6283995.1"
                     /translation="MQFKENNQPRFKHREERRSDECSPRFSDKGKMRGNEGKSDRPHK
                     LHFKRDEAYSRSEQIYPAEGKKASGEGSVQIWVKGGNSSVKEKKNGPLSPRAPEKIKK
                     NRLEEMKVYGENACISLFQQRPESIVRLWATVEGAKKLGDLMSYLAQHKKAYHVIDRE
                     EMERVTGTEHHGDMCLLVKKTASFVLEGYLQVPKKQDCLVLLDGVNNAQNVGGIIRTC
                     AFYGVKGIITENVDSLNSSAAARVAEGGLEFVRALETKNKHIALVQLRQAGYQIVHLT
                     RHKQAPSLTKIKLAEKVVFVLSEIPASDVAYAEDTTIQLSFNNPLNSGLNVAVNAGIL
                     LNQWYQTHIL"
     gene            2149..3033
                     /locus_tag="PXD69_001821"
     CDS             2149..3033
                     /locus_tag="PXD69_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDL6283996.1"
                     /translation="MNQQKPFEVIAIVGTPRHDSAFETHLAVYNWLKDRDYQILVETE
                     VATQLQLKESYSLDQIGQRAELVIVIGGDGNMLGIARALAKYRVPLIGINRGNLGFLT
                     DIAPQTAFEQLYSCLVKNEYVIEERFLLEAFIERNGKIIAANNALNEIVVHPTQVARI
                     IEFEVYIDGKFAFSQRADGLIVATPTGSTAYSLSAGGPILTPNMNAMALVPMHPHTLS
                     SRPLVVDGDSQISLRFAKYNTPDLEVICDGQVNMHFTPEDRVLVRKSPDKLQLLHLKD
                     YSYFTVLGSKLGWASKLF"
     gene            3172..4149
                     /locus_tag="PXD69_001822"
     CDS             3172..4149
                     /locus_tag="PXD69_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1852 domain-containing protein"
                     /protein_id="HDL6283997.1"
                     /translation="MTTNFKCQVHTIEFNEDYQPEQSTRLTTNFANLARGENRKQNLQ
                     NAIAMINNRFNDLANWDNPNADRYSVKLDIVSLDIDVEGKGEFFPAIEWLKTYVIDYK
                     TGKTIDGIIGNNFSSFVRDYDFSVLLLDHNKDKPQFSVPEGYGELHGKLFKHLLASPE
                     YTAKYKKPPVICLSVATTRTYTRTTNVHPILGVEYLQDSYSLTDAYFAKMGLKVRYFM
                     PPKSVAPYAFYFDENADLLNDYTNLELISTIATMEAFQKIYRPEIYNANSVAGQVYKG
                     SLTYQDYSVTKVEYDREERTQLAIKQGKYTEEHFIKRYQAILEAWATEE"
     gene            4237..5268
                     /locus_tag="PXD69_001823"
     CDS             4237..5268
                     /locus_tag="PXD69_001823"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL6283998.1"
                     /translation="MSNILLPTSTAGSLPKPSWLAEPEKLWSPWKFEGEELLQAKRDA
                     LLVSLAEQIAAGIDIVSDGEQTRQHFVTTFIEHLEGVDFSKREIVRIRNRYDASVPSV
                     VGAVSRPKSVFVDDAKFLRAHTDKPIKWALPGPMTMIDTLYDGHYKSREKLAWEFAKI
                     LNEEAKELEAAGVDIIQFDEPAFNVFFDELNDWGVAALERAAEGLKCETAVHICYGYG
                     IKANTDWKQTLGNEWRQYEESFPKLQQSKIDIISLECQNSRVPMDLIELVRGKKVMLG
                     AIDVATNIIETPEQVADTLRKALQFVDADKLYPSTNCGMAPLSRQVAQGKLQALSQGA
                     AILRAEFAK"
     gene            5356..5577
                     /locus_tag="PXD69_001824"
     CDS             5356..5577
                     /locus_tag="PXD69_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6283999.1"
                     /translation="MLNLFKKPIKKSSFEAWAKLMDDVAKVAILAIPVILYGEYSLLM
                     KFTHSITLFAVVYFLLATARLFRETAEEM"
     gene            5853..7115
                     /locus_tag="PXD69_001825"
     CDS             5853..7115
                     /locus_tag="PXD69_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000919159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDL6284000.1"
                     /translation="MLKRDMNIADYDAVLWQAIQDEDRRQEEHIELIASENYASPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQAN
                     AAVYMALLNPGDTILGMSLAHGGHLTHGASVSFSGKIYKAEQYGITDEGLIDYEALRK
                     QAQEVKPKMIVAGFSAYSQVMDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPNPLP
                     HAHVVTTTTHKTLAGPRGGLILSASGDEEMYKKLQSAVFPAGQGGPLMHVIAAKAVCF
                     KEALEPEFKAYQQQVVKNAKAMVEVFKQRGFDVVSNGTENHLFLVSFVKQGLTGKAAD
                     AALGAANITVNKNSVPNDPQKPFVTSGIRVGTPSVTRRGFKEAEVTALAGWMCDVLDS
                     IGKDNHEQVIAETKAKVLDICKRLPVYA"
     gene            7273..8109
                     /locus_tag="PXD69_001826"
     CDS             7273..8109
                     /locus_tag="PXD69_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDL6284001.1"
                     /translation="MLPRISSFLASLFMAFFLLGCSVSTQSLNEQNVDSIGQIIDLNT
                     NQTISFTELLSRLSSQDYVLVGEEHTQLIHHQIELYLFNQLTKKAKLHLIALEMLNVD
                     QQPAIDRIQFNRPVNLSATDLREAIQWQKWDWKMYQDLVVESLGSNSRVIATNLTDKE
                     VEILLNGAEPLKGSVSTSSEVKQKIAQLLLSMNHGMPYPMENMVAVQQFRDRRMAEKL
                     VKNALSTSLLIAGNHHVRKDLGVPLHIAEYDRTKKVAVLMLKTEREEITSSQADYLWV
                     TQ"
     gene            8163..10320
                     /locus_tag="PXD69_001827"
                     /pseudo
     CDS             8163..10320
                     /locus_tag="PXD69_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484758.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            10427..11065
                     /gene="purN"
                     /locus_tag="PXD69_001828"
     CDS             10427..11065
                     /gene="purN"
                     /locus_tag="PXD69_001828"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDL6284002.1"
                     /translation="MKKFVVLISGNGSNLQAMIDAQKSADTSGQICGVICNKADAYGL
                     IRAKQAGIPTFVFSRKDYQSNVEMDLAIAEQIEQLGAELIVLAGYMKILTPEFTQHFA
                     GKILNIHPSLLPKYPGLNTYQRAIEAGESEHGTTIHFVNEEVDAGAVVLQAKVPIYPE
                     DEIEDVMARVVEQEHRYYPLVIEWFCSGRLVSQHGKAYLDGKLLPACGYAED"
     gene            complement(11086..11892)
                     /locus_tag="PXD69_001829"
     CDS             complement(11086..11892)
                     /locus_tag="PXD69_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6284003.1"
                     /translation="MSNLLTCQNLSIVHQQKKLLEIQEIAFEQGKFTAIIGPNGAGKT
                     TLLKALSGNNAQTNSAVFYQHQRLTDLNGYALAQKRAMLSQQSQIAFPLKVEELVQLG
                     REPYRQSEFAKFNEKITAWAMETMSLTALKERSSIQLSGGEQHRAHIARVLAQLVPEP
                     NADLSGSWLLLDEPTNHLDIHHQYQLFSLLQKLKQQGLTIIAILHDPALAINQADHIL
                     MLKNGEKFAEMSAKAIAESCLLDELYEMKMGCRYCPHSGQYYLCPALAES"
     gene            complement(11892..12878)
                     /locus_tag="PXD69_001830"
     CDS             complement(11892..12878)
                     /locus_tag="PXD69_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6284004.1"
                     /translation="MKLHLTLIFTLIISLVICTHLGAMSLPLSAWHCNNAECESAAYI
                     LWQIRLPRLLGALFIGAALAISGATMQGLFRNPLVDPGIIGVSSGAALAAALYIVVIQ
                     PLLPESISYYALPIAAFLGGWLVTFMLYLLSQRNGQLHIAIMLLIGIALAAFSGALTG
                     ILIYVADDNQLRSLTFWSMGSLAGMNWQMVAMMAAVVFICSPLIWREHRALNALTLGE
                     EDAQYIGFDIAKVKRRLVFYVALLTGTSVACVGAIGFVGLVIPHLMRLLGGSNHRHLL
                     LNSLVCGAILLMIADTLARTLAAPAEIPIGIFTALFGAPFLAVMVWKSGKHI"
     gene            complement(12889..13743)
                     /locus_tag="PXD69_001831"
     CDS             complement(12889..13743)
                     /locus_tag="PXD69_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6284005.1"
                     /translation="MRTLLFSFIALSMCLNTTKAAEKIVSTAGYASEIVAALGKADKL
                     VGVDTTSVKPQTIMEKKPKIGYRRQLSAEGILSLTPDLIILAPDAGPNAVIEQIKASG
                     IPLLHLGEKPSLAGIREDIQQIAKAIGAESEAKQLTETILADEKKLADIRSQHSTDKE
                     VLVLIDTASQGIFGLGKKSVGDHFLTLLNLNNSFNAEGNKPLANEALAASNADVILLA
                     SRNQAKESATISKLAESSPQYAQLTNTQAGKKGCVFAINILDALGFGPYTAQYAHQIL
                     TTIQPCLK"
BASE COUNT         4167 a         2666 c         2992 g         3921 t
ORIGIN      
        1 ctttagaaag taaacgtaaa tcttccggtg agttgatttc gcttaacaga ggatacttct
       61 tttccataat gttttattac ccacaaccat caaataatag atgatattaa attaagcttt
      121 gagttcttcg gtcaaagtag gctgaatgct atttaaaatt tctttaacca cacggccgtt
      181 accaacaacc agattacctg ttttcaagta atctgttccg ccaacaaagt tagtcacaat
      241 tgcaccggct tcacgggcaa taagttcacc ggcggcgaaa tcccacggtt ttaagccgat
      301 ttcaaagaaa ccatcaacac gacccgctgc aacataggca agatctaaag cggcagaacc
      361 ggtacggcgg aaatcagcta ctccgttatt cattaagcct tcaagcatat ttaaatgtgc
      421 atcacgatgt ctgatgactt tgaaaggaaa accggttgca attacagtgc cttttaaatc
      481 acggcgttct gcatcaatgc gtaaacggaa ctcgtttaat ttagcccctt cgccacgcac
      541 cgcagtgaaa agctcgttac ggataggatc gtaaactacc cctactgttg tacgtccgtt
      601 ttcacgcacg gcaatcgaca cagcaaaatg aggtaagcgt tttacgaaat tggttgtacc
      661 atctaatgga tcgatcaccc attgtacatt ttcattgcta ccgtttaaca cgccggactc
      721 ttcggtcacg atcgagtgtt cagggtaaga tttacggatc acatcaataa ttgccgcttc
      781 cgctgcttta tcgatttcag tcacataatc attcgtattt ttttgtaaaa cttgtgtatc
      841 ttgaggcgat tgttcatagc ctttggcaat aatattgcct gcttttcgtg ccgcacgaat
      901 agcaatgttt aacattgggt tcatatttcc accagatttt aaagaacata ataaagcacg
      961 aattataaag aatgtagcga aataaagaaa caacaagcgg tctaatctgt gaaaaatttt
     1021 gcaaaaaaat ggctttttct aaccgcttgg agtttggatt cgttataata cctcccattc
     1081 aagccaccca tttaggtact aaaaatgcaa tttaaagaaa ataaccaacc tcgttttaaa
     1141 cacagagaag aacgccgttc agatgagtgt tccccccgtt tttcagataa aggcaaaatg
     1201 cgaggaaatg aaggtaaaag tgacagaccg cataagctac attttaagcg tgacgaggct
     1261 tattcacgct ctgagcagat ttatccagca gaaggcaaaa aagccagtgg tgaaggtagt
     1321 gtgcaaattt gggtaaaagg tgggaatagc tcagttaaag agaaaaaaaa cggcccgctt
     1381 tcaccgagag cgcctgagaa aattaagaaa aatcgcttgg aagagatgaa agtctatggc
     1441 gaaaatgcct gtatcagttt gttccaacaa cgtcctgaat ctattgtacg tttatgggca
     1501 acagtggagg gggcaaaaaa attaggcgat ttaatgagct atttggctca gcacaaaaaa
     1561 gcctatcacg ttattgaccg tgaagagatg gagcgagtca ccggtactga acatcacggc
     1621 gatatgtgct tattggtgaa aaaaacggct tcatttgtgc tagagggcta tttacaagtg
     1681 ccgaaaaaac aagattgctt ggtactgtta gatggtgtaa acaatgctca gaatgtgggg
     1741 ggaatcatca gaacgtgtgc tttttatggt gtgaaaggca ttattactga aaatgtggat
     1801 agcttaaact ccagtgctgc agctcgtgtc gcagagggtg gtttggaatt tgtgcgagcg
     1861 ttagaaacta aaaacaagca tattgctttg gtacaactcc gccaagccgg ttatcaaatt
     1921 gtccacctca cacgccataa gcaagcccct tctttaacca aaattaagct ggcggaaaag
     1981 gtggtttttg tattaagtga gattcctgca agtgatgtgg cttacgcaga agacacaaca
     2041 atacagcttt cctttaataa tccgttaaat agtggtttaa atgtggcggt aaacgcaggt
     2101 attctactta atcaatggta tcaaacccac attctttaag gaattgaaat gaatcagcaa
     2161 aaaccgtttg aagtgattgc gattgttggc acacctcgcc acgacagtgc atttgaaaca
     2221 catcttgccg tttataattg gttaaaagat cgtgattatc aaattttagt ggaaacagag
     2281 gttgccactc agttacagct taaggaaagc tacagtttag atcagattgg gcagcgcgca
     2341 gagttggtga ttgtgatagg tggcgatggt aatatgcttg gcatcgcccg agctttggct
     2401 aaataccgag tgccactgat aggcattaac cgtggcaatc tgggtttttt aaccgatatc
     2461 gcacctcaaa cggcttttga acagctttat agttgcttag tcaaaaatga gtatgtgatt
     2521 gaagagcgat tcctgttaga ggctttcatt gagcgcaacg gtaaaattat tgccgcaaat
     2581 aatgccttga atgaaattgt ggttcaccca acccaagtgg ctcgaattat tgaatttgaa
     2641 gtttatattg acggaaaatt cgctttttca caacgtgcag atggcttgat tgtggcaacg
     2701 cctacaggct caaccgccta ttcactttct gctggtggcc cgattttaac cccgaatatg
     2761 aatgcaatgg cattagtgcc gatgcaccct cacactcttt cttctcgtcc tttggtggtt
     2821 gatggcgata gtcaaatttc gcttcgtttt gccaaatata atacccctga tttagaagtg
     2881 atttgtgacg ggcaggtgaa tatgcacttt acgcctgaag atagagtctt ggtgcgtaaa
     2941 agcccggata aattacagct gctccattta aaagattata gctactttac tgtattaggt
     3001 tctaaattag gctgggcaag taagttgttt taaacacaag cggtgttttt tctgattaaa
     3061 tttgcaaatg caatatgaat tgatttcata tacatttcaa aaatatatca tttttattca
     3121 ataaaaattt gtggttcaat aagctatctg aaaaataaag gggacaataa aatgacaaca
     3181 aattttaaat gccaagtgca tactattgaa tttaatgaag attaccaacc ggagcaaagc
     3241 acccgtttaa ccaccaactt tgccaacctt gcccgtggcg aaaaccgcaa acagaacctg
     3301 caaaatgcga ttgcgatgat caataaccgt tttaacgatt tagcgaactg ggataacccg
     3361 aatgcggatc gttattcggt gaaattggat attgtctcac tggatattga tgtggaaggc
     3421 aaaggcgagt ttttccctgc gattgagtgg ctgaaaacct atgttatcga ctacaaaacc
     3481 ggcaaaacca ttgatggcat tatcggtaat aacttctctt cttttgtgcg tgattacgat
     3541 ttcagcgtat tgttgttaga tcacaataaa gacaaaccgc aatttagcgt gccggaaggc
     3601 tatggcgagt tacacggcaa gctgtttaag catttattgg catcgcctga atataccgca
     3661 aaatataaaa aaccaccggt gatctgttta agcgtggcaa ccacccgtac ctacacaaga
     3721 accactaacg ttcacccaat tttaggtgtg gaatatctgc aagatagtta ttcattaact
     3781 gatgcctatt ttgcgaaaat gggcttaaaa gtacgttact ttatgccgcc aaaatccgtt
     3841 gcaccctatg cgttctactt tgatgagaat gcagatttac tcaatgatta cactaactta
     3901 gagctaatca gcacgattgc cacaatggaa gcgttccaaa aaatttaccg tccggaaatt
     3961 tacaatgcca attcggtcgc agggcaggtc tataaaggca gcctgactta ccaagattat
     4021 tccgtcacca aagtggaata tgaccgtgaa gaacgcaccc agttggcgat caaacagggt
     4081 aaatacaccg aagagcattt tattaaacgt taccaagcga ttttagaggc ttgggcgacg
     4141 gaggaataaa cgtagggtgg gcgtaagccc accataaaat gagatataac caatggtggg
     4201 cttacgccca ccctactttt tataggaaaa ttcaaaatga gcaacattct tctcccaacc
     4261 tctaccgccg gcagcctacc aaaaccttcg tggcttgccg agccggaaaa actgtggtca
     4321 ccttggaaat ttgaaggcga ggaactactt caagccaaac gtgatgccct ccttgtttcc
     4381 cttgccgaac aaattgcggc agggattgat attgttagtg atggcgaaca gacccgccag
     4441 cactttgtga ccacctttat cgagcatttg gaaggggtgg attttagcaa gcgtgaaatc
     4501 gtgcgcattc gtaaccgtta cgatgccagc gtgccgagcg tggtgggggc agtttcccgc
     4561 ccgaaatcgg tgtttgtgga cgatgccaaa ttcttgcgtg cgcataccga caaaccaatc
     4621 aaatgggcat tacccggccc gatgacaatg atcgacactc tctatgacgg tcattacaaa
     4681 agccgtgaaa aattggcgtg ggaatttgcc aaaattctca acgaagaagc caaagagttg
     4741 gaagcggcag gggtggatat tattcaattt gacgaaccgg catttaacgt cttcttcgat
     4801 gagctgaacg actggggcgt ggcggcgtta gagcgtgcgg cggaaggctt aaaatgcgaa
     4861 acggcggtgc atatctgcta cggctacggc attaaagcca ataccgactg gaaacagacc
     4921 ctcggcaacg aatggcgtca atacgaagag agtttcccga aactgcaaca atcaaaaatc
     4981 gacattatct cgttagagtg ccaaaactcc cgtgtgccaa tggacttaat cgaattagtg
     5041 cgtggcaaaa aagtaatgct gggagcgatt gatgtggcta ccaacattat cgaaacaccg
     5101 gaacaagtgg cagatacgtt acgcaaagca ttacaatttg tcgatgcgga taaactttat
     5161 ccaagcacca actgcggaat ggcaccactt tcacgccaag tcgcacaagg taaattacag
     5221 gcactcagcc aaggggcagc gatattgcgt gcggaattcg caaaataatt ttgcgatctg
     5281 catcgaaaat atcaactttg ctttttgctc gtttccagat tttcttccaa aataacagga
     5341 aatgacggag gcactatgct aaatctattt aaaaagccaa ttaagaaaag ctcctttgag
     5401 gcttgggcaa aactaatgga cgatgtggca aaagttgcaa ttttagcaat tcctgttatt
     5461 ctctatggag aatattcact gctaatgaaa tttacacact caattacctt atttgcagta
     5521 gtttattttt tgttagcaac ggcaagattg tttcgagaaa cagcagagga gatgtaaatg
     5581 gacggattga caatcggatt atttcttttg cttgcatttt catttgctgc ataccaatgg
     5641 gcaaagcatt taaaagatca taatcattaa ttcaatgaat aatactaagc ggtcatattt
     5701 ggtaaatttt ttacaaaatg tgaccgcttg tttttctttc actcgaagtt aatttttata
     5761 taaataatac tatctatgaa actaaaaaat gcgtaaaata acgtgaaatc aacttacgca
     5821 aacgtttact taagcttatt aggagtccaa aaatgttaaa acgtgatatg aatatcgctg
     5881 attacgatgc agtattatgg caagccattc aagatgaaga tcgccgtcaa gaagaacata
     5941 ttgaattaat tgcatctgaa aactatgcaa gcccacgtgt aatgcaggct caaggctcac
     6001 aattaaccaa taaatatgca gaaggttatc cgggtaaacg ttactatggg ggttgtgagt
     6061 atgtggatat tgtagaacaa cttgcgattg accgtgcgaa agcattgttc ggggcagatt
     6121 atgccaacgt tcaaccgcat tcaggctcac aagcgaatgc agccgtatat atggcgttgc
     6181 ttaatccggg tgacactatt ttaggtatga gtttagcgca cggcgggcat ttaacccacg
     6241 gtgcttcagt tagcttctct ggtaaaattt ataaagcaga acaatacggc attactgatg
     6301 aaggcttaat tgattatgaa gcattacgca aacaagccca agaagtgaaa ccgaaaatga
     6361 ttgttgctgg tttctctgct tattctcaag ttatggattg ggcaaaaatg cgtgagattg
     6421 ccgatgaagt tggggcatat ttatttgtgg atatggctca cgttgcaggc ttaattgcgg
     6481 cgggagttta tccaaatccg cttcctcacg ctcacgtcgt gacgacaaca acccataaaa
     6541 ccttagccgg ccctcgaggt ggtttgattt tatctgcatc tggcgatgaa gaaatgtata
     6601 agaaactgca atctgccgta ttccctgctg gtcaaggtgg accattgatg cacgttattg
     6661 cggcaaaagc ggtttgtttt aaagaagctt tagagccgga atttaaggca tatcagcaac
     6721 aagttgtaaa aaatgcaaaa gcaatggttg aggtatttaa gcaacgtggt tttgatgtgg
     6781 tttcaaacgg tacggaaaac catttattcc ttgttagctt tgtaaaacaa ggtttaaccg
     6841 gcaaagcggc agatgctgca ttaggagctg cgaacattac cgtgaataaa aactcggtgc
     6901 cgaacgaccc tcaaaaacca ttcgtgactt caggtattcg tgtgggtacg ccttctgtga
     6961 cccgccgtgg ttttaaagaa gcagaggtga cagcattagc cggctggatg tgcgatgtgc
     7021 tagatagcat tggtaaggat aatcacgaac aggtgattgc agagactaaa gcgaaagttt
     7081 tagacatttg taaacgttta ccagtgtacg cataatctca actttacact ttttcaagcg
     7141 gtaatatttt ttagaaatat taccgctttt tgttttatca atcattttct ttatctgttt
     7201 tctgaaaatg gattgatttt tcttttttta cataacataa tgataataat tctcattaat
     7261 ttattttttg ttatgttacc tcgtatttcc tcttttttag ctagcctttt tatggctttt
     7321 tttcttttag gctgctcggt ttcaacgcaa tcccttaatg aacaaaacgt ggactctatc
     7381 ggccaaatta ttgatctgaa taccaatcaa acgatttcat ttactgaact actttcccgt
     7441 ctatcttctc aagattacgt tttagttggt gaggagcata ctcagttaat tcaccaccaa
     7501 attgaattgt atttatttaa tcaacttacg aagaaagcca agttacattt aattgcgttg
     7561 gagatgttaa atgtggatca gcagcctgcg attgatcgca ttcagtttaa ccgaccggtt
     7621 aatttatcag ccacggattt aagagaggca attcaatggc aaaaatggga ttggaagatg
     7681 tatcaagatt tagtggtaga gagcttaggt tcaaatagtc gtgttatagc cactaactta
     7741 acagataaag aggttgaaat tttattaaat ggggcggagc cattaaaagg ttctgtatcc
     7801 acttcctctg aagttaagca aaagatcgca caactgttgc tgtcaatgaa tcacggaatg
     7861 ccttacccga tggaaaatat ggtggcagta caacaattcc gtgatcgcag aatggcagaa
     7921 aaattagtaa aaaatgcgtt atcgactagc ttgctgattg caggtaacca ccacgttcgc
     7981 aaagatcttg gcgttccgtt gcatattgcg gaatatgacc gaacaaaaaa agtagcggtg
     8041 ctaatgctta aaacagagag agaagaaatt acttcttcac aggcagatta tctttgggtc
     8101 actcaataag gagaattatg aaatttaata taatcacacg cattttgttt ccggttttgt
     8161 gtatgggagg atcgcaaact gcattggcag aggaaaaggc gaaaaatatt gcggagcttg
     8221 atactgtgac ggtttatggc actgtggaaa accctaattt tgagaatttc agtaaagccg
     8281 gctcggtgag ttctcgagca atgaatgtga atgcaatgca aagtttagat agtattgtcc
     8341 gttctgtcgc aggtggctat acccaaattg acccggggca agggggcgtg agtgtgaata
     8401 ttcgtaatat gagtggtctt ggtcgggtaa ataccttagt tgatggcgtg ccacaaacac
     8461 agcttggtac atcagcaaac ggaggtggta agttccacac tgatggtaac gggccaatga
     8521 gccaattcag cactttaatt gatcaaaatt ttttaacccg agttgatatt gcgaaaggct
     8581 acaacaatgg tgcagccgga ttgaatgctt tagccggtag tgctaatttt aaaacgattg
     8641 atgtcgaaga tattctacta gaacaacata aagtcggcgt attaagccgt tttaattatg
     8701 gcaataatga tctgggaaaa aacggaatgc ttgcactagc cggaaaagtt gatgtgctgg
     8761 aaagtggttc tcttggcagt ttattggctt ttagcaaaag tagtatcagt caaaattatc
     8821 gccgaggtaa tggcacaatg gcaacggatt ctgcttatat gcaagggtta aaaaatcacc
     8881 ctgaatctta tatgggaaaa attgccttta agccaaatca agattcagag tttaaattgt
     8941 ccggacgtca atataaaaat agcttagtgg ggcgtaatat tgatagtgtg acctattcct
     9001 tagaatccag ttaccagcct caatctgatt ggattgatct gaaattccta acagcagtaa
     9061 cagaaactaa gcaagatttc cacgatgatg caaaactatg gacattagaa gatgcctcaa
     9121 ccaaaaacaa aatgtggatg tttgatttga ataacaccag ccgttttgag tcagggaaat
     9181 aaatattccc gtgatttacc ggaaagtaag aataatgatg gagcgattag caatgccgct
     9241 tttgggccgg caggtaagca aaatattgat tccctttacc tagacaccga atggaaatac
     9301 ggcattgtca ctttaaattc aagtcttcac tattcacgct atcagttaaa aggatataag
     9361 ccagaatgcg atagcgatga tatggattat tgtttccctt cttttgggtt tgatgttaat
     9421 aaaaaacatt ataagttgaa tccttctgcc actttagcat ttcaggttgc tgattggttt
     9481 caaccttttg tcagttacaa acaaacctcc cgttcgccta atgtgcaaga aatgtttaat
     9541 accagtcgaa atggcttgag tgtgaacccg tttttgaaac cagaaagtgc gaaaacctat
     9601 gagattgggt ttaatattca tcaagataat gtattactca ataatgatat cttggggcta
     9661 aaagcggtat attttaactc acgcattaaa gactatttgt ataacctctc gttgtatggt
     9721 tgtgggccaa cagtatgtcg aaattcaagt gatgctacca atgctataca gttccaaatt
     9781 tatgtgaatc accctgaaaa ggttaaaaat cgaggttggg aagttgagct ggcttacgat
     9841 tccgatgctt tttttgtcaa tggtagttat acccgaactg aaagcacagc acccacttca
     9901 aaaggtgcga ctattcttta tggatttggc actgaagctt atacccagct accaaaagat
     9961 tatgcgactt tggagctagg ggctaaattg ctggataaaa aattaacact gtctagcatt
    10021 tttaaatata caggcaaagc gaaacgtgtc ggtattgatt tagacgaaga tggcaacatt
    10081 attcacgagc agttaccgaa tattccggtg attatcgatt tatatgcaaa ttacaaagtg
    10141 aataaacatt taaccttaaa agccggggta caaaatgtga tgaaccgaaa ttatcttgat
    10201 gccttaaatg cgtataactc ttccaccgca gaagagtatg actatgatac agacacctat
    10261 cgtttcacaa atagtgccag aggtcgaact tacacactag gggcagaggt gcgtttctag
    10321 cttgaaagtg gcttatttta accaatacgc cctttttctt tcctgtactg atgttgagat
    10381 tcaaggcata atatccagaa cgatgaatat tcagccggtg tgtaatatga aaaaatttgt
    10441 ggttttaatt tcagggaatg gttctaacct acaagcaatg attgatgcgc aaaaatctgc
    10501 ggatacaagc ggtcaaattt gcggtgtaat ttgcaataag gcagatgcct atgggctgat
    10561 tcgagctaaa caggcgggaa tcccgacatt tgtattttct cgtaaagatt accaaagcaa
    10621 tgtggaaatg gatcttgcga ttgccgaaca aattgagcag ttaggagctg agttaattgt
    10681 attagccggc tatatgaaaa ttttaacgcc tgaatttacg caacattttg ctggcaaaat
    10741 actcaatatt cacccttcct tattacctaa atacccaggg ctaaacactt atcaaagagc
    10801 gatagaggct ggggaaagtg aacacggcac gactattcat ttcgtgaatg aagaagtgga
    10861 tgctggtgcg gtggtattac aagctaaagt gccgatttat cctgaagatg agattgaaga
    10921 tgtaatggct cgagtggttg agcaagaaca tcgatattat ccgttggtga ttgagtggtt
    10981 ctgttcgggt agattagttt ctcagcacgg caaagcgtat ttagacggta aactactgcc
    11041 tgcttgtgga tatgcagaag attaaacgat agggtgcatc gcaccctaac tttcagctaa
    11101 tgcagggcaa agataatatt gcccgctgtg agggcaatag cgacagccca ttttcatttc
    11161 atacagctca tctaataaac aactttctgc aatggcttta gcggacattt cagcaaattt
    11221 ttctccattt tttagcatta agatatgatc ggcttgattt attgccaatg caggatcgtg
    11281 caaaatcgca atgatagtta agccttgttg tttcagcttt tgtagtaagg aaaaaagctg
    11341 atattggtga tgaatatcca aatggttggt gggttcatca agcaaaagcc agcttccgct
    11401 taaatcggca ttcggttcag gaacgagttg agccagcact cgagcaatat gcgctcgatg
    11461 ttgttctcca ccggaaagtt gtatgctact tctttctttt aatgcggtta aagacattgt
    11521 ttccatagcc caagcggtta ttttttcatt aaattttgca aattcacttt ggcgatatgg
    11581 ctctcttccg agttgtacca attcttctac ttttaaggga aaggcaattt ggctctgttg
    11641 gctgagcatt gcccgttttt gagccagagc atatccgttt aagtctgtta agcgttgatg
    11701 ttgataaaat acggcactgt tagtttgtgc attattaccg cttaaggctt tgagcaaggt
    11761 tgttttgccg gctccgtttg gaccgatgat ggcggtaaat tttccttgtt caaaggcaat
    11821 ttcttgaatc tccagcaact ttttttgttg atgaacgatg cttaaatttt ggcaagttaa
    11881 taaattgctc attagatatg tttcccactt ttccatacca ttactgcaag gaatggcgca
    11941 ccaaataagg cggtaaaaat accaatcggg atttctgccg gggcggctag ggttctggca
    12001 agagtatctg caatcattaa taagattgca ccgcaaacca aactattgag taataaatgg
    12061 cggtggttac tgcctcccag taaacgcatt aaatgtggaa taaccagccc gacaaagccg
    12121 atagccccaa cacaggcaac gcttgtgccg gttaataagg caacgtaaaa cacaagacga
    12181 cgtttgactt ttgcaatgtc aaaaccaatg tattgtgcat cttcttcacc taatgttaag
    12241 gcgtttaacg cacggtgttc ccgccaaata agtgggctac aaatgaagac aaccgcagcc
    12301 atcattgcca ccatttgcca attcatacct gctaaagatc ccatactcca aaaggttaaa
    12361 ctacgaagtt ggttatcatc ggcaacataa atcagtatgc cggttaaagc gccactaaat
    12421 gcagctagag caataccaat taatagcata atggcgatat gtagttgccc gttacgttga
    12481 gaaagtaaat agagcataaa agtcaccagc cagcccccta aaaaggcggc aataggtaga
    12541 gcataatagc tgattgattc cggcagtagt ggctgaatca ccacaatata taatgccgca
    12601 gccaatgcag cacctgaaga gacaccaata atccccggat ctactaacgg attgcgaaac
    12661 agcccttgca ttgttgctcc gctaatagcg agggctgccc cgatgaataa tgcccctagt
    12721 aatcgaggca ggcggatttg ccataaaata taggctgcac tttcgcattc agcgttgttg
    12781 cagtgccaag cggatagggg taatgacatc gcccctaaat gggtacaaat cactaagctg
    12841 ataattaaag tgaaaattaa ggttaaatgc agtttcaaag cgtatccgtt attttaaaca
    12901 aggttgaata gtggtgagaa tttggtgtgc atattgagca gtgtaaggcc caaagcccaa
    12961 ggcatctaaa atattgattg caaaaacaca gccttttttg cccgcttgtg tatttgtgag
    13021 ttgggcgtat tgtgggctgg attctgctaa tttactgatc gttgcagatt cttttgcctg
    13081 attacgggag gctaataaaa taacatcggc attgcttgca gctaaagcct cattggcgag
    13141 tggcttattg ccctcagcat tgaaactatt gtttagattt aacaaggtta agaaatgatc
    13201 acccacactc tttttcccta gcccaaagat accttgcgat gcagtgtcaa tcagcactaa
    13261 gacttctttg tcagtagaat gttggctacg aatgtcggct aatttttttt catctgccag
    13321 aatggtttct gttaattgtt ttgcctctga ttctgcacca atcgccttgg caatttgctg
    13381 aatatcctca cgaatccctg ctaagctcgg tttctctcct aagtgaagta atggaatacc
    13441 gctggcttta atttgctcaa taactgcgtt agggccggca tcaggggcta aaataatcaa
    13501 atctggggtt aaagagagaa taccttcagc agaaagctgg cgacgataac cgattttagg
    13561 ttttttctcc attatcgttt gaggtttaac tgaagtggta tccacaccga ctaacttatc
    13621 agcttttcct agtgctgcga caatttcgga agcatagccc gcagttgaaa caattttttc
    13681 tgccgccttt gtggtattta aacacattga tagggcaatg aaagaaaaaa gtaaggttct
    13741 catttt
//
LOCUS       DANLXO010000074        13734 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.074, whole genome shotgun sequence.
ACCESSION   DANLXO010000074 DANLXO010000000
VERSION     DANLXO010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13734
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.074"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..609
                     /locus_tag="PXD69_001832"
     CDS             <1..609
                     /locus_tag="PXD69_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6284006.1"
                     /translation="LSLSIMPKLIKKLSQTNENFIYSVEAIDVDQTVNTLIEGKSDFI
                     FSFYDEKLMQPPFMSLEIMQSKLYPISPIDITGSALFSLNDKNIPLLNYTPNSYMGRL
                     VNRKLANTIQLKTKTKFISSMSELLKNMVLNHQGIAWLPEYSISEELHNKKVIILDKN
                     ELVIPIKSYIYRMNTRLNNAAERFWNNLQNIQFINEDILNKP"
     gene            complement(694..2043)
                     /locus_tag="PXD69_001833"
     CDS             complement(694..2043)
                     /locus_tag="PXD69_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL6284007.1"
                     /translation="MLLFIMFAAIILLLVLIMKFKVHAFVALIIVSLLTALAAGIPVD
                     KILPTLLNGFGSTLASVALLVGLGAMIGRLLEITGGAKVLADTLINKFGKERAPFALG
                     VASLLFGFPIFFDAGLVVMLPIIFSVAKQFGGSVLRYAFPSAGAFAVMHAFLPPHPGP
                     VASGDLLGVNMGLLVLVGLVCAIPTWYIGTYLFSQFISKRIHVDLPKAFLNGLSANEM
                     AVQNPPSFGKVLTVLVLPIILILFDTGLNTLSVAKVIDGSEMWVQSLRLIGKTPVALL
                     ITLIVAIMLLRDNRSFDQIEKICNNALGPICSIVLVTGAGGMFGGVLRASGIGDVLSE
                     MMKDTGMPIVVAAFIIATVFRVAQGSATVALTTTAALIAPTVAAATDLSQFDLCFIVI
                     AIASGATVLSHVNDSGFWLMSRFLEMDEKTTLKTWTMLETAIGLTGFACALIGSWLL"
     gene            2230..2745
                     /locus_tag="PXD69_001834"
     CDS             2230..2745
                     /locus_tag="PXD69_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDL6284008.1"
                     /translation="MANGKAFILMGVSSTGKTSVGTAVAQRLGIKLIDGDDLHPRANI
                     LKMASGTPLNDADRTPWLERINDAVFSFEQKSEKGIIVCSALKKKYRDQIRQGNADVT
                     FLFLHGSFELVLARMQQRKGHFMKPEMLQSQFNTLEIPQADEPDVIFIDIDGSFDEVV
                     ERCVKAVEPLL"
     gene            complement(2799..3798)
                     /gene="gntR"
                     /locus_tag="PXD69_001835"
                     /pseudo
     CDS             complement(2799..3798)
                     /gene="gntR"
                     /locus_tag="PXD69_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674159.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
     gene            complement(3891..5051)
                     /locus_tag="PXD69_001836"
     CDS             complement(3891..5051)
                     /locus_tag="PXD69_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HDL6284009.1"
                     /translation="MIEQSYKIALLFNANKIYDRGVMQGIGQFIQASQCTWDIFVEDD
                     FVYHKNSIESLSIDGIIADFDDLETVELLKDIDVPIVAVGGSYQNPDYYPDLPYVATD
                     NYALVEAAFLHLKQKGINQFAFYGYPAETEKHWAIERKNAFIQLMEKYEHHPNCYIGD
                     QFHSDNWVELQAKLGEWLQTLPAHTGIIAVTDARARHLLQTCEHLKIAVPEQLCVIGI
                     DNEELIQYLSRVSLSSVTQGTSQIGYHAVKLLYRKLNNLPVSTKPILIPPVKVEERRS
                     TDYRSLQDPMVIQAMHFIRHRACQGIKVEQVLDHLKISRSNLEQRFKQEMNKTIHQVI
                     HEEKLARATYMLKFTEISTQEIANVCGYPSLQYFYAVFKKEFGKTPKEFRQE"
     gene            complement(5174..5560)
                     /gene="rplQ"
                     /locus_tag="PXD69_001837"
     CDS             complement(5174..5560)
                     /gene="rplQ"
                     /locus_tag="PXD69_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDL6284010.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMASALVEHEIIKTTLPKAKEL
                     RRVVEPLITLAKADSVANRRLAFARTRNVDTVAKLFNELGPRFAQRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRPEVATEAAAE"
     gene            complement(5596..6585)
                     /gene="rpoA"
                     /locus_tag="PXD69_001838"
     CDS             complement(5596..6585)
                     /gene="rpoA"
                     /locus_tag="PXD69_001838"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDL6284011.1"
                     /translation="MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTL
                     NKSGIGPVTAADITHDGDVEIVNPDHVICHLTDKNASINMRIRVQRGRGYVPASARLH
                     TQNDDRPIGRLLVDARFSPVDRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIR
                     RAATILAEQLAAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED"
     gene            complement(6616..7242)
                     /gene="rpsD"
                     /locus_tag="PXD69_001839"
     CDS             complement(6616..7242)
                     /gene="rpsD"
                     /locus_tag="PXD69_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDL6284012.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHG
                     ARKPRLSDYGSQLREKQKVRRIYGILERQFRNYYTEANRLKGNTGENLLVLLEGRLDN
                     VVYRMGFAATRAEARQLVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKAS
                     LELATQREKPTWLEVDATKMEGVFKRRPERSDLSADINEHLIVELYSK"
     gene            complement(7271..7660)
                     /gene="rpsK"
                     /locus_tag="PXD69_001840"
     CDS             complement(7271..7660)
                     /gene="rpsK"
                     /locus_tag="PXD69_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDL6284013.1"
                     /translation="MAKTPVRARKRVKKQIADGVAHIHASFNNTIVTITDRQGNALAW
                     ATAGGSGFRGSRKSTPFAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            complement(7677..8033)
                     /gene="rpsM"
                     /locus_tag="PXD69_001841"
     CDS             complement(7677..8033)
                     /gene="rpsM"
                     /locus_tag="PXD69_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDL6284014.1"
                     /translation="MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVK
                     IRELSEEQIEKLREEVGKFTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            complement(8171..8284)
                     /gene="rpmJ"
                     /locus_tag="PXD69_001842"
     CDS             complement(8171..8284)
                     /gene="rpmJ"
                     /locus_tag="PXD69_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDL6284015.1"
                     /translation="MKVRASVKRMCRNCKVIKREGVVRVICSDPKHKQRQG"
     gene            complement(8309..9628)
                     /gene="secY"
                     /locus_tag="PXD69_001843"
     CDS             complement(8309..9628)
                     /gene="secY"
                     /locus_tag="PXD69_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDL6284016.1"
                     /translation="MAKQPGYQGSTQKGTGELKSRLLFVLGALIVFRIGSFIPVPGID
                     ASVLSELIRQQQGTIIDMFNMFSGGALSRASIFALGIMPYISASIIIQLLTAIHPPLA
                     ELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISLALPNMVHGLVPNPSILFYVTSVVS
                     LVTGTMFLMWLGEQITERGIGNGISLIIFTGIVADLPATIGQTIEQARQGELSFIVLL
                     LVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMMAPARTSHLPLKVNMAGVIPAIF
                     ASSIILFPASITQWFGQSEGFEWLFNLSQLLQPGQPLYVVLFTMAVIFFAFFYTGMQY
                     NPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIGALYIAFVCLVPYIITSLW
                     KVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSQQYDSVLKKANLKGLN"
     gene            complement(9631..10065)
                     /gene="rplO"
                     /locus_tag="PXD69_001844"
     CDS             complement(9631..10065)
                     /gene="rplO"
                     /locus_tag="PXD69_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDL6284017.1"
                     /translation="MRLNSLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGG
                     GVRRGFEGGQMPLYRRLPKFGFTSLKSFHVAEIRLNDLAKVDGNEVTLETLKAANIIT
                     KDILSAKVILAGKIERAVVVKGLRVTKGAKAAIEAAGGSIEE"
     gene            complement(10070..10246)
                     /gene="rpmD"
                     /locus_tag="PXD69_001845"
     CDS             complement(10070..10246)
                     /gene="rpmD"
                     /locus_tag="PXD69_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDL6284018.1"
                     /translation="MAKIKVTQTRSSIARLPKHKATLKGLGLRHIRHTVELEDTPAVR
                     GMINQVSYMVKVEE"
     gene            complement(10253..10753)
                     /gene="rpsE"
                     /locus_tag="PXD69_001846"
     CDS             complement(10253..10753)
                     /gene="rpsE"
                     /locus_tag="PXD69_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDL6284019.1"
                     /translation="MSNIEKQAGELQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNG
                     RVGFGHGKAREVPAAIQKAMEKARRNMINVALNEGTLQHPVKGSHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALENMKSPEMVAAKRGKT
                     VEEILG"
     gene            complement(10768..11121)
                     /gene="rplR"
                     /locus_tag="PXD69_001847"
     CDS             complement(10768..11121)
                     /gene="rplR"
                     /locus_tag="PXD69_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDL6284020.1"
                     /translation="MDKKVARIRRASRARHLMREQGATRLVVHRTPRHIYAQVIAPNG
                     SEVLAAASTVEKVIKEQVKYTGNKEAAAVVGKIVAERAIAKGIKAVAFDRSGFKYHGR
                     VQSLADAAREAGLQF"
     gene            complement(11136..11669)
                     /gene="rplF"
                     /locus_tag="PXD69_001848"
     CDS             complement(11136..11669)
                     /gene="rplF"
                     /locus_tag="PXD69_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDL6284021.1"
                     /translation="MSRVAKAPVNIPAGVEVKLNGQLLTVKGKNGELSREIHNAVEVK
                     QEADALTFAPREGIANADAQAGTARALVNNMVIGVTEGFTKKLQLVGVGYRAQMKGNA
                     VALSLGFSHPVEHTLPAGVTGECPSQTEIILKSADKQLIGQVAADIRAYRKPEPYKGK
                     GVRYSDEVVRTKEAKKK"
     gene            complement(11686..12078)
                     /gene="rpsH"
                     /locus_tag="PXD69_001849"
     CDS             complement(11686..12078)
                     /gene="rpsH"
                     /locus_tag="PXD69_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDL6284022.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKVAISMPSSKLKVAIANVLAEEG
                     YIESVKVVEGVKPELEITLKYFQNKPVVESIQRVSRPGLRIYKRKDELPKVMGGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            complement(12115..12420)
                     /gene="rpsN"
                     /locus_tag="PXD69_001850"
     CDS             complement(12115..12420)
                     /gene="rpsN"
                     /locus_tag="PXD69_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDL6284023.1"
                     /translation="MAKQSMIARDVKRAKLADKFYAKREELKKIISDVNASDEDRWAA
                     VLKLQTLPRDSSPIRQRNRCRQTGRPHGVLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            complement(12432..12971)
                     /gene="rplE"
                     /locus_tag="PXD69_001851"
     CDS             complement(12432..12971)
                     /gene="rplE"
                     /locus_tag="PXD69_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDL6284024.1"
                     /translation="MAKLHDYYRDTVVNELKAKFNYSSVMQVPRIEKITLNMGVGEAL
                     TDKKLLDNAVADLAAISGQKPLVTKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLNAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSA
                     KTDEEGQALLAAFNFPFRK"
     gene            complement(12989..13300)
                     /gene="rplX"
                     /locus_tag="PXD69_001852"
     CDS             complement(12989..13300)
                     /gene="rplX"
                     /locus_tag="PXD69_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDL6284025.1"
                     /translation="MAAKIRQNDEVIVLTGKDKGKRGKVTKVLPNGKVFVEGINIITK
                     HEKPVPALGKAGGLVKKEAAIDVSNVAIFNPETNKADRVGFRFEDGKKVRFFKSNEKT
                     I"
     gene            complement(13311..13682)
                     /gene="rplN"
                     /locus_tag="PXD69_001853"
     CDS             complement(13311..13682)
                     /gene="rplN"
                     /locus_tag="PXD69_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDL6284026.1"
                     /translation="MIQEQTMLDVADNSGARSVMCIKVLGGSHRRYAAIGDIIKVTVK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGAVIRFDGNACVILNNNTEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
BASE COUNT         4008 a         3021 c         2653 g         4052 t
ORIGIN      
        1 ctctctcttt ctattatgcc caaattaatt aagaaattat cacaaacaaa tgaaaatttt
       61 atttattccg ttgaagcaat cgatgttgac caaacagtaa atactctaat tgaaggaaaa
      121 agtgatttta ttttttcatt ttatgatgaa aaattaatgc aaccaccctt tatgtcttta
      181 gaaataatgc aatctaaact ttaccctatt tccccaatag acattacagg atctgcatta
      241 tttagtttaa acgataaaaa cataccatta ttaaattata caccaaattc ctatatggga
      301 cgcttagtga atagaaagtt agctaatacg attcaattaa aaacaaaaac aaaatttatt
      361 tcatcaatgt ctgaattatt aaaaaatatg gtactaaatc atcaaggcat tgcatggctc
      421 cctgaatatt ctattagtga agaattacac aataaaaaag taatcatact agacaaaaat
      481 gaattagtta ttccaataaa aagttatatt tacagaatga atacgagact aaataatgca
      541 gcagaaaggt tttggaataa tttacaaaat attcagttta taaatgaaga tatattaaat
      601 aaaccctaac attctataat aagaaaaagc ggtcgattct ctgccaaatt ttgcaaattt
      661 tagaagaaaa cagaccgctt gtcagggttg gaattagagt aaccagctgc caatcaatgc
      721 acaggcaaaa ccggttaaac cgatggcagt ttcaagcatt gtccacgttt tgagggtagt
      781 tttttcgtcc atttcaagga aacggctcat cagccagaaa ccggagtcat tgacgtggga
      841 aagcaccgtc gcaccggagg cgatagcaat cacgataaaa cagaggtcga actggcttaa
      901 atcagtcgct gccgccacag ttggcgcaat caacgctgct gtggtggtta aagcaacggt
      961 tgccgagcct tgtgcgacac ggaataccgt agcaataata aaggcggcaa ccacaatcgg
     1021 cattccggtg tctttcatca tttccgataa tacatcgcca atcccgctgg cacgcaacac
     1081 gccaccaaac attccgcctg caccggttac taagacaatc gagcagattg ggccaagggc
     1141 attgttacag attttttcga tttggtcgaa actgcgatta tcccgcaaca gcataatcgc
     1201 cacaattaag gtaatcagta aagcaacagg ggttttgccg attaagcgaa ggctctgcac
     1261 ccacatttca ctgccatcaa tcactttagc aacggagagg gtattcaagc cggtatcaaa
     1321 caaaatcagg ataatcggca gcaccaacac cgtgagtacc ttgccaaaac ttggcgggtt
     1381 ttgtactgcc atttcgtttg ccgataagcc gtttaaaaac gctttcggca aatcaacgtg
     1441 aatgcgtttg ctgataaatt ggctgaacag gtaagtgccg atataccacg ttgggattgc
     1501 acaaaccaag cccaccaaga ctaacagccc catattcaca ccaagcagat cgccggaggc
     1561 aaccgggccg gggtgcggag gtagaaaggc gtgcattacc gcaaacgcac cggcagacgg
     1621 aaacgcatag cgcaacaccg aaccgccgaa ctgttttgcc acgctaaaaa taatcggtaa
     1681 catcaccacc aagccggcat caaagaaaat cgggaagccg aataacagcg aggcaacgcc
     1741 caacgcaaaa ggcgcacgtt ctttgccgaa tttattgata agcgtatccg caagcacttt
     1801 cgccccgccg gtgatttcaa gcaagcgacc aatcatcgcc ccaagcccca ccagtaacgc
     1861 cactgatgcc agcgtactac caaaaccatt caacaatgtt ggcaggattt tatctaccgg
     1921 aataccggca gctaatgcag tgagcaggct cacaataatc aatgccacaa aagcgtggac
     1981 tttaaatttc ataatcagca ccagcaataa aatgatggca gcaaacataa tgaacagtaa
     2041 cataggatct cctaaggttg aattgttatc ggtaacataa ccaaaaagca gtttagagta
     2101 aacggttgca gggcttttat tttaaaaatg tgatctactt caagttttct ggaaatagca
     2161 gatgattttt cagcataacc tgttacatta acggctaagt taacgttacc agtaacacaa
     2221 ggaaattcaa tggcaaacgg caaagcattt attttgatgg gcgtgtccag caccggcaaa
     2281 accagcgtgg gaacggcagt cgcacagcgg ttgggaataa aattgattga tggggacgac
     2341 ttacaccctc gtgccaatat actgaaaatg gcaagtggca cgccactcaa tgatgcagat
     2401 cgcacaccgt ggttggagcg gattaacgat gcagtgttca gttttgaaca aaaaagcgaa
     2461 aaagggatta tcgtctgctc agcattgaag aaaaagtacc gagaccagat ccgacaaggc
     2521 aatgccgatg tgacttttct attcttgcac ggctcgtttg aactggtgct ggctcgaatg
     2581 caacaacgca aagggcattt tatgaaaccg gaaatgcttc aaagccaatt taatacgctg
     2641 gaaattccgc aggcagacga accagatgtg atatttattg atattgacgg cagttttgac
     2701 gaggtggtgg agcgttgcgt gaaagcagtt gagccgttgc tttaatcaca agtggtggat
     2761 tttgcggatt tttttgcaaa tttaaccgct tgtccgggct acacactttc ccccaaatgg
     2821 atctgatagc ccaagttaat tatggagctt tgttgtggta cgccgtgaat acggttgagc
     2881 agctcttggg cggcaactct gcctatttca aggcgaggtg tgatgacgct ggcaagctgt
     2941 ggcgtgaggg attgcccgac atcgtgtccg tgaaagccgg cgattttaat ctgctgcggc
     3001 acatgaatgc ctaaccgttg gcactcaaat aatgccccga ttgccaaatc gtcattggtg
     3061 caaaaaatgc cgtctagctg cggaatgtgt tgcagggctt gttttagctg gcttgcgcca
     3121 agcgtgaaag aagaatgctc tgcagtagta atgctgtgtg ggcttaagcc gtgtttgagc
     3181 attgcctgtt cgtagccctg cattttcagc tgagagcgtt tatccattct cgccccgaaa
     3241 tacaccacct gtcggcagcc tcgatgaatc attgtctcga ccattgcttg agccgcagaa
     3301 atattgtcaa tatccgaccg cttgttgaat gccacattcg ccgctttcca ttatctcaat
     3361 caccggaata ttcgccactt ccagcatttt caaggtgcgg ggcgagtggt gattttccga
     3421 taagataatg ccgtcaatat tgtacgaaag cagcgactca atccgctgct cttccttttg
     3481 ttcgctgtaa ccatagtggg cgagcatggt ttgatagctg gcttggtcgg taatctgctc
     3541 aatgccttta atcacatcgg caaacacttg attggtaagc gaaggaacca gcacgccaat
     3601 tgcacggctt ttggcattcg agagaatatc cggtgcacgg tttgggatat agccaaacag
     3661 ctcaatcgct tgtgcaatcc gctcgccggt ctccttggca acggtgtttg gatcccgcaa
     3721 aaagcgactg accgtcattt tggtaatgcc gagatgggta gcgatgtctt gcaaagttgg
     3781 gcgtttcggt tttctcattg gaatagataa cgaaaaaatt taatttcgct gattataact
     3841 gaagataagg caataattgc aaaatattcg gtgaaattga ccgcttgtta ctactcttgc
     3901 ctgaactctt tcggggtttt accaaactct tttttaaaca cggcatagaa atattgtaaa
     3961 gagggataac cgcacacatt ggcaatttct tgggtcgaaa tctcggtaaa tttgagcata
     4021 tatgttgctc ttgctaattt ttcctcgtga atcacctggt gaattgtctt attcatttcc
     4081 tgcttaaaac gctgttcaag gttagagcgg gaaattttaa gatgatccag tacttgctct
     4141 actttaatgc cttggcaagc tcggtgacga ataaagtgca tagcttggat taccattggg
     4201 tcttgcaaag aacgataatc ggtcgaacgg cgttcttcca cttttaccgg cgggattaaa
     4261 atcggcttgg ttgaaaccgg tagattattt aattttcgat ataataactt cacagcgtga
     4321 tagccgattt gtgatgttcc ttgtgtgact gaagaaagag aaacccgaga gaggtattga
     4381 atcaactctt cgttatcaat gccgatcacg caaagttgtt caggtacagc gatttttaaa
     4441 tgctcacagg tttgaagcag gtgtcttgcc cttgcgtcag taacggcaat aatgcccgtg
     4501 tgggctggta aggtttgtaa ccactcgcct aatttggctt gtaattcaac ccaattatct
     4561 gaatgaaatt gatcaccaat ataacaattt gggtgatgtt catatttttc catcaactga
     4621 ataaaggcat tttttcgctc tatcgcccaa tgtttttccg tttctgcagg atagccgtaa
     4681 aacgcaaatt ggttgattcc tttttgtttt aggtgtaaaa atgctgcctc aactaaggcg
     4741 taattgtcgg tagcaacata aggaaggtca gggtaatagt cagggttttg gtaagaaccg
     4801 cctactgcta caatggggac gtcaatatct ttaagtagct caactgtttc caaatcgtca
     4861 aaatcggcaa taatgccgtc aatcgacagg ctttcgatac tatttttatg atagacaaaa
     4921 tcatcttcca caaaaatatc ccaagtacat tgtgatgctt gaataaactg cccaatgccc
     4981 tgcattactc ctctgtcata aattttgtta gcattaaaaa gtaaggcaat tttataagat
     5041 tgttctatca ttacttcctc cagtacccac tttcaaaagt aactataaaa taaaattatt
     5101 ttttgatcaa aacgaataaa agaataaaac cccggtattt ctaccagggt tttaagctca
     5161 attttgatta agattattcc gcagctgctt cagttgcaac ttctgggcga tccactaact
     5221 caatgtaagc cattggagca ttatcacctg cacggaaacc acattttaaa atgcgagtgt
     5281 aaccacccgc acgttgtgca aaacgtggac ctaattcatt gaataattta gcaactgtat
     5341 caacgttgcg tgtacgggca aaagctaaac ggcgatttgc aacgctgtct gctttagcta
     5401 aagtaattaa cggctcaact acacggcgta actctttcgc ttttggtaaa gttgtcttga
     5461 tgatttcgtg ttcaacaagc gcacttgcca tattacggaa catcgcttgg cgatggctgc
     5521 tgttacggtt taattgacgt ccactcttac gatggcgcat aacctattcc ttcttagaaa
     5581 atctataccg aaaaactagt cttctgcaat acttgcaggt ggccagtttt caaggcgcat
     5641 accgagtgat aaaccacgag aagcaagaac atccttaatc tctgtaagag attttttacc
     5701 caagttcggg gttttaagaa gttcaacttc tgtacgttgt actaaatcac cgatatagtg
     5761 aattgtctct gctttcaaac agttagcaga acgaactgtc agctctaggt catctactgg
     5821 acgaagaaga ataggatcaa attccggttt ttcttctttc acttcaggtt gacgaacatc
     5881 acgcaaatca acgaatgcag caagttgttc tgctaaaatc gttgcagcac gacggatagc
     5941 ttcttcagga tctaacgttc cgttagtttc catctcaata acaagtttat ctaagtctgt
     6001 acgttgttca acacgagcag cttcgacatt gtaagcaatg cgatctacag gtgaaaaacg
     6061 tgcatctact aataaacgac cgatagggcg gtcatcgttt tgagtatgaa gacgtgctga
     6121 tgcaggaaca taacctcgac cacgttgaac acgaatgcgc atattaattg atgcattctt
     6181 atctgttaaa tgacagatta cgtgatcagg attcacaatt tctacatcgc catcgtgtgt
     6241 gatgtcggct gcagttacag ggccaattcc agatttattt agtgtcaaaa taatatcatc
     6301 tttattttgc acttttaccg ctagaccttt aaggtttaat aatacctcaa gaatatcttc
     6361 ctgaacgcct tctttgctgc tgtactcatg cagtacacca tcaatttcaa cttcagtaac
     6421 tgcacaaccc ggcatagatg aaagtaaaat gcggcgaagt gcgttaccta atgtatggcc
     6481 aaaaccacgc tctaacggct ctaatgtcac tttagcatga gttgaactaa cttgttcaat
     6541 atttactaag tgcggcttta aaaattctgt cacagaaccc tgcatttttt cctctctttg
     6601 cggttaagct aactattatt tagagtaaag ctcaacgatc agatgttcat taatatctgc
     6661 tgatagatca gaacgctctg gacgacgttt aaatacgcct tccattttag ttgcatcaac
     6721 ttctaaccaa gttggttttt cacgttgagt tgctaattct aatgatgctt taatacgtgc
     6781 ttgttttttc gatttttcac gaacagcaac aacatcatca acagaaactt ggaatgaagg
     6841 aatgtttact acacgaccgt ttactacgat tgatttatgg ctaacaagct gacgtgcttc
     6901 tgcacgtgtt gctgcaaaac ccatacgata aactacgtta tctaaacgac cttccaataa
     6961 tactagtaag ttttcaccgg tattaccttt taagcggttc gcttctgtat aataattacg
     7021 gaattgacgc tctaagatac cataaatacg gcgaactttt tgtttttcac gtaattgact
     7081 accatagtca gataaacgtg gcttgcgagc accatgttga ccaggcgcta catcaagtct
     7141 atttctacat tttgattcaa tcgcacgaac gcctgatttt aagaataaat cagtaccttc
     7201 acgacggctt agcttgagct taggacccaa atatcttgcc attttctttc tccaattctt
     7261 ttaacgtcaa ttaaacacga cgttttttcg gtggacgaca accgttatgt ggaatcggag
     7321 tcacatcagt aatattcgtg atacggaaac ctgctgcatt taatgcacgg attgttgact
     7381 cacgacctgg acccggtcct ttaaccataa cttccaaatt ctttaaacca aactctttaa
     7441 ccatttctgc acaacgctct gcagcaactt gagcagcgaa tggagtcgat ttacgagaac
     7501 cacggaaacc tgaaccacct gcagttgccc aagctagagc attaccttga cggtcagtaa
     7561 tagtaacgat tgtgttattg aaagatgcgt ggatatgagc tacgccatct gcaatctgtt
     7621 tttttacgcg cttacgtgcg cgaactggtg ttttagccat tatttatcta ctccgactat
     7681 tttttgatcg gtttgcgtgg acctttacgg gtacgcgcat tagtcttagt acgttgacca
     7741 cgtaccggta aactacgacg atgacgtaaa ccacggtagc aacctaagtc taaaagacgt
     7801 ttgatgctta aagttacttc acgacgtaaa tccccttcga cagtaaattt accaacttct
     7861 tcacgcagtt tttcaatctg ctcttcagac aattctctga tctttacatc ttcagcaata
     7921 cccgttgcag cacagatggc ttttgcacga gttttaccga taccgtaaat tgcagttaat
     7981 gcgattacag tgtgtttttg atcaggaatg ttaatgcctg caatacgggc cactatgcac
     8041 tcctattatt taagtttatt gatatactga tcttgaaaag cccgtttcag gatactcaaa
     8101 cagtatatca ggacgaatga gctgagcagt ataactgctc agcgggttct ttgcaagaaa
     8161 tatgcgtaaa ttaaccttga cgttgtttgt gtttaggatc gctacaaatt acacgaacca
     8221 caccttcacg tttgattact ttacaattac ggcacattct ttttactgaa gcacgaactt
     8281 tcattgctta tcctttatta acggcctatt aatttagacc ttttaagtta gctttcttca
     8341 acacagaatc atattgttga gacattaaat gactctgaac ctgtgcgatg aaatccataa
     8401 taacaaccac tacaatcaat aatgatgtac cacctaattg gaatggcacc ttccataacg
     8461 acgtaatgat gtaaggaacc aaacaaacaa aagcaatata taacgcacca attaaggtta
     8521 aacgtgtcat tactttatcg atataacgag atgtttgttc gcctggtcgg taacctggta
     8581 caaacgcacc tgatttctta agattatccg ctgtatcacg aggattatac tgcattcctg
     8641 tataaaagaa agcaaagaaa atcactgcca ttgtgaataa tacaacatac agtggttgac
     8701 ctggctgtaa tagttgtgaa aggttaaata accactcaaa tccttcgctt tgaccaaacc
     8761 attgagtaat gcttgccggg aataaaataa tacttgaagc aaaaattgcc ggtattaccc
     8821 ctgccatatt cacttttaat ggtaagtgag aagttcttgc aggcgccatc attcgacctt
     8881 gttggcgact tgcatagttt acaactattc ttctttgtcc acgttcaaca aaaacaacaa
     8941 aataagttac tgcaaatgca attattgcaa ctagtagtaa gacgataaat gataactcgc
     9001 cttgacgggc ttgttctatt gtctgcccta tcgttgctgg aagatctgca acaatacctg
     9061 taaaaataat caatgagata ccgtttccga taccacgctc agtgatttgt tcgcctagcc
     9121 acattaggaa cattgttcct gtcactaagc ttactacaga ggttacatag aataatatac
     9181 ttggattagg aactaatcca tgtaccatat tcggtagggc tagtgaaata ccaatagatt
     9241 gaataaatgc taataacagt gtgccatagc gtgtatattt actgattttc cgacgacctg
     9301 cttcaccttc tttctttaat tcagctagag gtgggtgaat cgctgtcaat aattggataa
     9361 taattgacgc tgaaatataa ggcataatac ctagtgcaaa tatagatgca cggcttaaag
     9421 caccaccaga gaacatatta aacatatcaa tgatggtgcc ttgctgttgt cgaattaatt
     9481 cggataatac agaagcatca atgccaggaa caggtataaa agaaccgata cggaaaacga
     9541 ttaacgcacc taaaacaaac aatagtcttg atttaagctc gccagtccct ttttgtgtac
     9601 taccttggta ccctggttgc tttgccatct ttattcctcg atagaaccgc cagcagcttc
     9661 aatagcagct ttagcgcctt tagttacacg taagccttta acaactactg ctctttcaat
     9721 tttgcctgct aaaattactt tagcagataa aatatcttta gtaatgatgt ttgctgcttt
     9781 taatgtctct aaagttactt cgttgccatc tactttagct aagtcgttta aacgaatttc
     9841 agccacatgg aatgatttta atgaagtaaa accaaatttt ggcaaacgac gatataaagg
     9901 catttgacca ccctcgaaac cacgacgaac accgccgcct gtacgagatt tttgaccttt
     9961 atgaccgcgc ccaccagttt tacctaaacc agaaccaata ccacgaccta gacgttttgc
    10021 actgtgctta gcaccttcag ctggagaaag agaatttaaa cgcattctat tactcctcta
    10081 ctttaaccat ataagacact tgattgatca taccacgcac tgctggtgta tcttcaagtt
    10141 ctacagtatg acgaatatga cgaagaccta agccttttaa cgttgcttta tgtttcggta
    10201 aacgagcgat agagctacga gtttgagtta ctttaatttt tgccatatcc aattacccca
    10261 aaatttcttc aactgttttg ccacgttttg cagcaaccat ttcaggtgat ttcatgttct
    10321 caagtgcatc gattgttgca cgaacaacgt taattgggtt agttgaacca tacgctttag
    10381 aaagaacgtt acgaacaccc gcaacttcta atactgcacg cattgcacca ccagcgatga
    10441 tacctgtacc ttcacttgct ggttgcataa atacgcgtga acctgtatgt gaacctttaa
    10501 ctggatgttg taatgtacct tcatttaaag ctacattaat catattgcga cgagcttttt
    10561 ccatcgcttt ttggattgct gctggaactt cacgtgcttt accgtgacca aaacctacac
    10621 gaccgttacc atcgcccact actgttaaag cagtgaaact cataatacga ccacctttta
    10681 cggtttttga aacacggtta accgcgatta gcttttcctg cagttcacca gcttgttttt
    10741 cgatgtttga catctcaaat tcctctatta gaactgtaga ccagcttcac gagcagcatc
    10801 tgctaatgat tgcacacgac cgtggtattt aaaaccagaa cggtcaaaag caaccgcttt
    10861 aatacctttg gcaattgcac gctcagcaac gattttaccc actactgctg cggcttcttt
    10921 attgccggta tatttaactt gctctttaat tactttttca acagttgaag ctgctgctag
    10981 tacttctgag ccattaggtg caatcacctg cgcatagata tggcgaggtg tgcgatgcac
    11041 aactaaacgt gttgcacctt gctctctcat taaatgacgt gcacggcttg cacgacggat
    11101 acgagctact ttcttatcca tagtgttacc ttactttact ttttcttcgc ttcttttgta
    11161 cgcactactt catcagagta acgtacacct ttacctttat aaggttcagg tttgcgatat
    11221 gcacgaatat ctgctgccac ttgaccaatt aactgtttgt cagcactttt cagaataatt
    11281 tctgtttgtg atggacattc accagttacg cctgctggca acgtgtgttc tactgggtga
    11341 gagaaaccta aacttaaagc aacagcattg cctttcattt gtgctctata accaacaccc
    11401 actaattgca atttcttagt aaagccttca gtaaccccga ttaccatatt atttactagt
    11461 gcacgagcag tacctgcttg agcatctgca ttagcgatac cttcacgtgg agcgaaagtt
    11521 aatgcatctg cttcttgttt tacttcaact gcattgtgaa tttcacgaga taactcgccg
    11581 tttttacctt taactgttaa tagctgaccg ttaagtttta cctcaacacc ggcaggaata
    11641 ttaacaggtg cttttgcaac acgagacatt tttcctacct ctctattatg ctacgtaaca
    11701 gataatttca ccgccgaggc ccgcttgacg cgcagcacgg tcggtcatta cacctttaga
    11761 tgtagaaaca actgcgatac ctaaaccacc cattactttt ggtaattcgt ctttgcgttt
    11821 ataaatacgc agacccggac ggctcacacg ttggatactt tctacaaccg gtttgttttg
    11881 gaaatatttt aaagtaattt ccagttcagg tttaacacct tcaacaactt taacgctttc
    11941 gatataacct tcttcagcta aaacatttgc aatagcaact tttaacttag atgaaggcat
    12001 actgattgca actttgttcg cagcttgacc gttacgaata cgggtcagca tatctgcgat
    12061 tggatcttgc atgctcatgt atttactccc atgattccaa attaaaagag gttattacca
    12121 gcttgccttc ttaagacccg gaatttcacc gcgcatagca gcttcacgaa ccttaatacg
    12181 gcttaaacca aacttacgaa gtacgccatg tggacgacca gtttggcggc aacgattacg
    12241 ctgacggatt gggctagaat cacgaggaag tgtttgtaat tttaacactg ctgcccaacg
    12301 gtcttcatca gatgcattca catcagagat gattttcttt aattcttcac gttttgcgta
    12361 gaatttatca gctaatttag cacgttttac atcgcgtgcg atcattgatt gttttgccac
    12421 gataacctac cttatttacg gaatgggaaa ttgaaagcag ctaataaagc ttgaccttct
    12481 tcatcagttt tcgctgaggt ggtgatagta atatctaaac cacgaacacg atctacttta
    12541 tcgtagtcga tttcagggaa aatgatttgt tcacgaacac ccatactgta attaccacga
    12601 ccatcgaatg acttagcgtt taaaccgcgg aagtcacgaa tacgtggaac agcgatagta
    12661 atcaatcttt caaagaattc ccacatacgt tcaccacgta gggttacttt gcaaccgatt
    12721 ggataccctt gacggatttt aaagcctgca acagatttgc gagctttagt tactaaaggt
    12781 ttttgaccgc tgattgctgc taaatccgct actgcgttat ctaacagttt tttgtcggtc
    12841 aatgcttcac ccacacccat gttaagggta atcttttcga ttcgtgggac ttgcatgaca
    12901 gatgagtagt tgaattttgc ttttaattca ttaactactg tatctctgta gtaatcatgc
    12961 agtttcgcca tcacattact ccagttaatt aaattgtttt ctcgttagat ttgaagaaac
    13021 gcactttttt gccatcttcg aatctaaatc ctacacggtc agctttgttg gtttcagggt
    13081 tgaagatcgc aacgtttgaa acatcgattg cagcttcttt cttcactaaa ccaccagctt
    13141 tgcctaatgc aggaactggt ttttcgtgtt tagtgatgat gttgataccc tcaacaaaaa
    13201 ctttaccatt tggtaacact ttagttacct taccacgttt gcccttatct ttaccggtaa
    13261 gaacaattac ttcatcgttt tgacggattt ttgcagccat tacattctcc ttatagtact
    13321 tctggagcta aagagatgat tttcataaac ttctcagaac gaagttcacg agtcaccggt
    13381 ccaaaaatac gagtaccgat tggttgctca gtgttattgt ttaaaattac acaagcattg
    13441 ccatcgaaac gaataactgc gccatctggg cgacgaacac ccttcttggt gcgcacaaca
    13501 actgctttta acacatcacc ttttttcact ttaccgcgtg gaattgcttc ttttacagta
    13561 actttaatga tatcgccaat agcagcgtaa cgacggtgcg atccacctag aaccttgata
    13621 cacattacgc tacgagcccc tgagttatca gcaacatcca gcatagtctg ttcttggatc
    13681 atattagtgc tccgttaaaa taaaaaaaca ccctttcggg acgaacctat ttat
//
LOCUS       DANLXO010000075        13273 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.075, whole genome shotgun sequence.
ACCESSION   DANLXO010000075 DANLXO010000000
VERSION     DANLXO010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13273
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.075"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..165)
                     /locus_tag="PXD69_001854"
     CDS             complement(<1..165)
                     /locus_tag="PXD69_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N-acetylneuraminate-beta-galactosamide-
                     alpha-2, 3-sialyltransferase"
                     /protein_id="HDL6284027.1"
                     /translation="MNLIICCTPLQVLIAEKIIEMHPNERFYGVMLSTVKNAKFDFYQ
                     ARLAQKCEQFF"
     gene            complement(162..1367)
                     /locus_tag="PXD69_001855"
     CDS             complement(162..1367)
                     /locus_tag="PXD69_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HDL6284028.1"
                     /translation="MKAVKDSVIYLIGELASKSIPFLLLPYFSRKLGVAGYGELSYYQ
                     TFAALFVIFIGLSQDGAVARYFYFYGKRSLNLVLSTGYLYTLCATLLILLGCWYFQSE
                     IIAYVAIGAMFQSFLNVQLSVRQCQKQALAYTTIQLMSAIFSAVITVAMMEYFKTDLV
                     EKRILAILMSNGLVFLIAYFLYAKRAKTKKFSLARHKTALLYLFGFGIPLILHHSSIF
                     LKGQLDRVFIYHKFSEEDLGLYAMGAQIAMILAIVVQALNKATLPYFYEALKQKKINV
                     SHIHKWALYALFIVPLPAIVMWFIPEELVVWILGSQFVGTKYYIILFLIATMLVVPYL
                     ILVNYLFFYGKNKLISLCSILSTIFYLVALFALTFSKIEYIPFASIIGAISIIPILYI
                     MTAKVGKTV"
     gene            complement(1377..2561)
                     /gene="neuC"
                     /locus_tag="PXD69_001856"
     CDS             complement(1377..2561)
                     /gene="neuC"
                     /locus_tag="PXD69_001856"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDL6284029.1"
                     /translation="MKNIAYITGSRAEYGIVKRLLQKLAQDPTVNFSLVVTAMHLDPQ
                     YGNTVTVIEQDGFEIAARIPLTLNSENNQTIIHSMAECLDRFGEHFQQHRYDAVIVLG
                     DRYEMLAVATAAAMHNIPLIHLHGGEQTLGNYDEFIRHCITKMSKLHLTSTEEYRQRV
                     IQMGELPENVVNTGSLGAENSLDLVLPTQAELVERLGIPASPYFLVVFHPETLTDVSV
                     LEQIEALLNAFEQFKDKYQFVFIGSNSDTNSEQIYARFKAYTDENQFKFFTSVKPEEY
                     LALIKYSNGLIGNSSSGLIEAPSCGVGTLNIGNRQQGRVRDESVIDVESNEQAIIDGI
                     EKLISADFQHRLPSMKNPYFQDNAMEKAYNAIKIFLADSHHTQPKGFYDVAFSQAVKK
                     SE"
     gene            complement(2562..3821)
                     /locus_tag="PXD69_001857"
     CDS             complement(2562..3821)
                     /locus_tag="PXD69_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL6284030.1"
                     /translation="MKKIAIITARAGSKGLPNKNVLLANGKPLMAYSIEAAIESGQFE
                     KIIVSTDSQEYIDLFSHYPIEFIKRAEHLASDKASSFVVIEDVLNQYRSVEFDYFMLL
                     QPTSPLRSGEHIKESCEKFEKNFEQFDFLVSVSDAHKPTTLTRMIEEDECLKHFQLDY
                     SNYARQLHHPEYSPNGAIFTAKPEAYLKQKHFYGAKCLAYFMDKDVSIDIDDRQDFEY
                     FYFILQQRNKEKILLETIKRSILMKKENFKEVKEIALIGHSIIEYWDIEHLNGKAVNN
                     LGIAGISTKQYSDLILDEGLISALPKDIILMFGTNDIVYAGWSDEKILADINHLIAQL
                     TAIRGDINLYFLEITPTAFRVDRNNNDIRLLNQYLKDNLAVKWISLDQAFSDKYGKLD
                     LSYSDDGLHLNAKGYEKLTAILEKELN"
     gene            complement(3881..4918)
                     /gene="neuB"
                     /locus_tag="PXD69_001858"
     CDS             complement(3881..4918)
                     /gene="neuB"
                     /locus_tag="PXD69_001858"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HDL6284031.1"
                     /translation="MVNVFIVAEIGCNHNGDPALAKKMVDVAKECGVDAVKFQTFKAD
                     KLISKYAPKAEYQKVTTGTADSQLEMTRKLELPYEEFVKLEAYARSLGLEVFSTPFDF
                     ESIDFLASQQQKVWKIPSGELTNLPYLEKIARLPIEGKTIVISTGMATIEETKASLKV
                     LEDNGVAKKDITILHCNTEYPTPYEDVNLNAFHQLKQEFGDYSLGFSDHSAGYFAGLA
                     AVPYGITFIEKHFTLDKNFEGPDHKASVTPEELKLLCEGIRAVEKSLGSSEKLVTNSE
                     AKNKIVARKSIIAARPIKKGEIFTTENITTKRPGNGISPMFWYDVLGKEAQQDFEEDQ
                     LIQDSRFENQM"
     gene            complement(4918..5562)
                     /locus_tag="PXD69_001859"
     CDS             complement(4918..5562)
                     /locus_tag="PXD69_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDL6284032.1"
                     /translation="MQQKSKREKLILIGAGGYAKSVLDSLDHEQYEFCGLIDNFKPEG
                     SVHLGYPILASTIDCFSKRDNYHYFICIGNNSYRLEKFSKLQKYKCRIINVVDKTALV
                     SKNSTLGIGVFVGKMAIVNSGVTVGDNVIINTKSLVEHGCFIGSHCNISTNTTLNGDV
                     IVEDHAFIGSSSVVNGQLRVGESALVGSGAVVIRNVEPRTVVAGVPAKYIKDIK"
     gene            5695..6438
                     /locus_tag="PXD69_001860"
     CDS             5695..6438
                     /locus_tag="PXD69_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL6284033.1"
                     /translation="MFEFIKLITAMILPPFNIILLWLLALILFSLGYKYAAYFFALLG
                     ILILYIFSIPYTSQKLGDSLVEAEPFTIEKYKNAQAIVVLGGGLRDSQELFGKLAITG
                     IPLERMRYAAYLHKETGLPILATGSSPNGTSEAKVMADEFKMFFNIETKWLENKAKTT
                     KENAIFSREILEKENIHKIILVTNQWHMKRAEMLFSQQGFEVMSASVGSGDTPDHYKL
                     NFMHFIPQAGAMNSNMLALKEWIGYWKEK"
     gene            complement(6515..8713)
                     /gene="priA"
                     /locus_tag="PXD69_001861"
     CDS             complement(6515..8713)
                     /gene="priA"
                     /locus_tag="PXD69_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDL6284034.1"
                     /translation="MALNVPLHRYFDYLLPPAFNACQGGRVVVPFGRQTKIGIVVDFP
                     QTSDVPTEKLKPIKAALDSSPIFDSEMWQLLNWAARYYHAPIGEVLTGALPIKLRNGD
                     STERVQPNYFVVTEQGRKSLIIGENKKAKKQVERLTELAECAKYFEKPTACSPSAWKG
                     LLEKGYIEKIDVPFMAQAWQDSLGEFPLVNTNNRLILNKQQTLVVSRLNAQTTFASFL
                     LNGVTGSGKTEVYLQLIETVLKREEQVLLLVPEIGLTPQTVQRFKARFNVEIDVLHSN
                     MNETERLNAWLRAKNGESAIVIGTRSALFTQFQKLGVIILDEEHDSSFKQQDGWRYHA
                     RDLAVVRAKNANIPIVLGSATPSLESLHNVQNGKFIELTLTARAGNAQLANQQIIDLK
                     TQRVTAGLSERLLSMMKTQLEQGNQVMLFLNRRGFAPVLLCHECGWVCECEACNKPFT
                     YHQKQKVLRCHHCATQRVIPRQCGHCGSTHLITTGVGTEQLEQVLNQQFPHYQVTRID
                     RDSTARKGALENHLTAIREGKSQILIGTQMLAKGHHFPNVTLVAIVNVDSALFSTDFR
                     AEEKLAQLYIQVAGRAGRAEKKGEVVLQTHYPDHPLLKTLLEQGYRAFADEALKMRQL
                     MSLPPFSSQVLFKATGKDNQQTLQLLEQLADYFSQKIQQQNGQGFQLPPPFSAPMAKK
                     AGHYRWLLLIQHPLRGALQQLLDAFDQERESLNIPNNIRLNIDIDPQEIS"
     gene            complement(8725..9337)
                     /locus_tag="PXD69_001862"
                     /pseudo
     CDS             complement(8725..9337)
                     /locus_tag="PXD69_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
     gene            complement(9330..10229)
                     /gene="rarD"
                     /locus_tag="PXD69_001863"
     CDS             complement(9330..10229)
                     /gene="rarD"
                     /locus_tag="PXD69_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL6284035.1"
                     /translation="MLKGILLSLSASVLFGCMYYLAIFLKPLAGVSIFGIRMLVTIPF
                     LFLALYLFKKQNEFWVFLQRLKQEPYLLLVILITASIVGGQMWLFLWAPNSGKAIEVS
                     MGYLLMPIIMVAFGKVVYKETLSLNKWLAIVVAFIGVASNILFTGKISIASLFVCTGY
                     PIYFYLRRKFGLSHLHSFVVEILYLLPVACYFISQTDMQYVETQNLNIYYFIALLGLI
                     SGTALISYTLASTILPFNLLGLLGYVEPLLMLVVSFLIGERLANESYLLMICLLISIS
                     FLVLDGMFALRQQRKRKLSVNNE"
     gene            complement(10456..11673)
                     /locus_tag="PXD69_001864"
     CDS             complement(10456..11673)
                     /locus_tag="PXD69_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDL6284036.1"
                     /translation="MDRFPKSDKLAQVRYDIRGPIHKEALRLEEEGHKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIVQYYQSKGMRGMDVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPMPDYPLWTAASTLAGGKAVHYLCDEENEWFPDLED
                     IKSKITPRTKGILVINPNNPTGAVYSRQILLEIAELARQHNLIIFADEIYEKIVYDGA
                     VHHHIAALAPDVLTVTYNGLSKAYRVAGFRQGWMVLSGPKHQAKGFIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFVLPGGRLLEQRNKMHELLVQIPGISCVKAKGALYM
                     FPKIDTEMYGIKDDQKFIYDLLRQEKVLLVQGSGFNWKKPDHFRVVTLPYAHQIEEAI
                     GRLANFLKTYRQD"
     gene            11861..13165
                     /locus_tag="PXD69_001865"
     CDS             11861..13165
                     /locus_tag="PXD69_001865"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HDL6284037.1"
                     /translation="MLIFHQLKQELTKSYSKVGREQGLVAIQASMPLLEANIPLLGWL
                     KTQKTSYPHFFLQYRDTDQTIATIGTLRQFYTLEAAQSFIQQHHFPLIGGLQFEGNTQ
                     FILPQFSLVKNQQNLTACFYFDSDNFEQQAVIFEQFLANFSQITELGLTDNPLVSMSA
                     TSHFEQWKANIEKAIVSIEQGDFQKVVLANAMRLHFEQPICAYSLLAQSQKTNLGCYH
                     FLWAESADVAFLGSTPERLYQRQGLHFSTEALAGTAAVTTSEVQTELNAQWLLSDPKN
                     IYENQLVVDDIENQLKDCVTEFAVSEAKIKRLHNVQHLRRQIQATLKPDTSDSDCLSK
                     IHPTAAVAGLPRQKAKGFITENEPFTRHWYAGTLGVMGNEEAEFCVTLRSALISQNSI
                     TLYAGAGIVSGSDPQSEWQEIKRKAQGMAKLLDVDLVTKGEL"
BASE COUNT         4097 a         2838 c         2423 g         3915 t
ORIGIN      
        1 aaaaaattgt tcgcactttt gggctaatct agcttggtaa aaatcaaatt tcgcgttttt
       61 taccgtagaa agcatcaccc catagaatcg ctcattaggg tgcatttcaa tgattttttc
      121 agcaatcaac acttgcaagg gcgtgcaaca aataattaaa ttcatacggt ttttcctact
      181 tttgccgtca ttatataaag aatcggaata atgctgattg caccaatgat gctggcaaaa
      241 ggaatatatt caattttaga aaaagttaaa gcaaatagtg caactaaata aaaaatagta
      301 gataaaatcg agcaaagcga aattagctta tttttgccat aaaaaaacaa ataattgact
      361 aaaatgaggt aaggcacaac caacattgtc gcaattaaaa agagaataat gtagtatttt
      421 gttcctacaa attggctacc cagaatccat accactaatt cttccggaat aaaccacatc
      481 acaatagcag gtaatggtac aataaataag gcatacaacg cccatttgtg gatatggctg
      541 acattaattt ttttctgctt taaggcttca taaaaataag gcagtgttgc tttatttaag
      601 gcttgaacca caatggctag aatcatcgca atttgagccc ccattgcata taaacctaaa
      661 tcctcttcgc taaatttatg gtaaataaat actctgtcta actgtccttt taagaaaata
      721 ctggaatggt gcaaaatcaa cggaatacca aagccgaata aatacaataa agcagtttta
      781 tggcgggcaa ggctaaattt cttcgttttt gctcttttag catacaaaaa gtaagcgatt
      841 agaaagacta agccattact catcaaaatc gctaaaatcc gcttttccac taaatcggtc
      901 ttaaaatact ccatcattgc aacggtaata actgccgaaa aaatcgccga cattaattga
      961 atcgttgtat aagcaagtgc ctgtttttga cactgcctta cactaagctg tacattcaaa
     1021 aacgactgga acatcgcccc aatcgctaca taagcaataa tttcagactg gaaataccag
     1081 caacccaaca ggataagcaa agttgcacaa agagtatata aataccctgt actcaagact
     1141 aaatttagtg aacgcttacc ataaaaatag aaatagcgag caaccgcacc gtcttggcta
     1201 agcccgataa aaattacaaa taaagcagca aaggtttggt agtaggaaag ctccccataa
     1261 cctgccacgc cgagtttgcg tgaaaagtag ggtaagagca agaaaggaat tgactttgac
     1321 gccaattccc caattaaata aatcacactg tctttaactg ctttcatagt tgcaaattat
     1381 tctgattttt tgaccgcttg cgagaaagca acatcataaa atcctttcgg ttgagtatgg
     1441 tggctgtctg ctaagaatat tttgattgca ttgtaagcct tttccatcgc gttgtcttga
     1501 aaatatggat ttttcatact cggtaaacgg tgttggaaat cggctgaaat caatttttcg
     1561 ataccatcta tgatagcctg ttcattactc tctacatcaa ttacgctctc atcccgtact
     1621 cgcccttgct ggcgattacc gatatttagc gtaccaacac cacaactcgg tgcttcaatc
     1681 aagcctgatg agctattacc aatcaaccca tttgaatatt taatcaacgc taaatactct
     1741 tccggtttga ctgaggtgaa aaacttaaat tgattttcat cggtgtaagc cttaaaacgt
     1801 gcataaattt gctctgaatt ggtgtctgaa tttgagccga taaagacgaa ttggtatttg
     1861 tctttaaact gctcaaaagc attgagtaac gcctcaattt gctccaacac ggaaacatcg
     1921 gttaaggttt ccgggtggaa gaccactaaa aaataaggcg atgccggaat ccctaatctc
     1981 tcgactaatt ctgcttgggt cggcaacact aaatccaaac tattctccgc ccctagagaa
     2041 ccagtattca ccacattttc gggcagctcg cccatttgaa tcacacgctg tctatattct
     2101 tcagttgaag ttaaatgcaa tttcgacatt ttggtaatac aatggcgaat aaattcatcg
     2161 taattaccta atgtttgctc accaccgtgc agatgaatca gcggaatatt atgcatcgcc
     2221 gcagccgttg ccaccgccaa catctcgtaa cgatcgccta gcacaatcac cgcatcataa
     2281 cgatgttgct ggaaatgttc gccaaatcga tctaaacact ctgccattga atgaataatg
     2341 gtctgattat tttcactgtt taaggtaagc ggaatacgag ctgcaatctc aaagccatct
     2401 tgctcaatga ccgtcaccgt attgccatat tgcggatcca aatgcatcgc agtaacaacc
     2461 agagagaaat tcacagtcgg atcttgtgct aatttttgta ataaacgctt tacaatcccg
     2521 tattcggcac gagatccggt aatataggca atatttttca tttagttgag ctctttttcc
     2581 aaaatagcgg ttaatttttc ataacctttt gcatttaaat gtaatccgtc atcgctatag
     2641 cttaaatcca atttgccata tttatcgcta aatgcctgat ctaagctaat ccatttcacc
     2701 gctaaattat ctttaagata ttgatttaac aagcgaatat cgttgttatt acgatcgact
     2761 ctaaatgcag ttggggtaat ttccaagaaa tagagattaa tatctccacg aattgctgtt
     2821 aattgtgcaa ttaaatgatt aatatctgct agaatttttt catcactcca gccagcatat
     2881 acaatatcat tagtaccgaa cattaaaata atgtctttag gtaaagcaga aattaaacct
     2941 tcatccaaaa tcagatcact gtattgtttt gttgaaatac ctgcaattcc taaattatta
     3001 actgccttac cgtttaaatg ttcaatatcc caatattcaa tgatcgaatg cccgattaag
     3061 gctatctctt tcacttcttt aaagttctct tttttcatta aaatcgaacg tttaatggtt
     3121 tcaagtaaga ttttttcttt attgcgttgt tgcagaataa agtagaagta ctcgaaatct
     3181 tggcgatcat caatatcaat agaaacgtct ttatccataa aataggctag acatttcgca
     3241 ccatagaagt gtttttgttt aagataggct tctggcttag ctgtaaaaat agctccattc
     3301 ggtgaatatt caggatgatg caattggcgt gcatagttag aataatccaa ctgaaaatgc
     3361 tttaggcact cgtcttcctc aatcatacga gtcaatgtcg taggtttatg ggcatcagaa
     3421 acagatacta agaaatcaaa ttgttcgaaa tttttctcaa atttttcaca cgattcctta
     3481 atatgctctc ctgatctcaa cggcgaagtt ggttgaagta gcataaaata gtcaaactct
     3541 actgatctat attgatttaa cacatcttca atcacgacaa aagaactcgc cttatcactg
     3601 gctaaatgct cggcacgttt aataaattca attggataat gtgagaacaa atcaatgtat
     3661 tcttgggaat cagtactaac gataattttc tcaaattgcc ccgactcaat cgcagcttca
     3721 atagaatagg ccattaacgg cttaccgttg gctaataata catttttatt cggcaagcct
     3781 tttgaaccgg ctcgggctgt aataattgca atttttttca taaatttgac cgcttgttaa
     3841 acacaaaatg atggagcttt catcccatca ctatattata ttacatctga ttttcaaaac
     3901 gagaatcttg aattaattga tcttcttcaa aatcctgttg tgcttcttta cctagcacat
     3961 cataccaaaa catcgggcta atgccattac cggggcgttt agtcgtaata ttttcggttg
     4021 taaaaatttc gcctttttta attggacgtg ccgcaataat tgattttctt gccacaattt
     4081 tattttttgc ttccgaatta gtgactaatt tctcggaaga acccagcgat ttttccaccg
     4141 cacgaatgcc ttcacacagt aatttcagct cttcaggtgt aaccgaagct ttatgatccg
     4201 gaccttcaaa gtttttatct aaggtaaaat gtttttcaat gaaggtaatg ccgtaaggta
     4261 ctgccgccaa ccctgcaaaa taaccggcag agtggtcaga aaaacctaaa ctatagtcgc
     4321 caaactcctg ttttagctga tggaacgcat ttaaattcac atcttcataa ggtgtcgggt
     4381 actcggtatt acaatgtaaa atcgtaatat cttttttcgc tacaccgtta tcttccaata
     4441 cttttaatga ggcttttgtt tcttcaatgg ttgccatacc ggtagaaata acgatcgtct
     4501 tgccttcaat cggaagtcgt gcaatttttt ctaaatacgg caaattggtt aattcaccag
     4561 acggaatttt ccacactttt tgttgttggc ttgccaagaa atcaatcgac tcgaaatcga
     4621 atggcgtaga gaatacctct aaccccaatg aacgagcgta agcctctaat ttcacaaact
     4681 cctcataagg taactctaat ttgcgggtca tttctaattg ggaatcagcg gtgccggtcg
     4741 ttactttttg atactcggct ttaggggcat atttagagat caacttatcc gctttaaagg
     4801 tttggaattt caccgcatcg acaccacact ctttcgctac atcaaccatt ttctttgcta
     4861 acgcaggatc gccgttatgg ttacaaccga tttctgccac aataaataca tttaccatta
     4921 ttttatatcc ttaatatatt ttgctggaac gcctgctaca actgtgcgag gctccacatt
     4981 tctaattacc actgcaccgg agccaaccaa tgcactttca cccactctta gctgtccgtt
     5041 cacaacagag gaactaccaa taaaagcatg atcttcgaca attacatcgc catttagtgt
     5101 cgtattggtt gaaatattgc aatgactgcc gataaaacaa ccatgctcaa ccagcgattt
     5161 agtgttaatg atcacattat cgcctacagt tacgccactg tttacaattg ccatttttcc
     5221 aacaaacact ccaatgccta gagtggaatt tttggacacc aatgcggttt tatctaccac
     5281 attaattatt ctacacttat atttttgtag cttagagaat ttttctaaac ggtaactatt
     5341 atttccaata caaataaaat agtgataatt atctcgttta gaaaaacaat caattgttga
     5401 agctagaata ggataaccta agtgcacact accttcaggc ttaaagttat cgataagtcc
     5461 acaaaattca tattgttcgt gatcaagtga atctaacact gatttggcat agccaccggc
     5521 accgatcaaa atcaattttt ctcttttaga cttttgttgc attgctatca cccatgatga
     5581 atttcaattc atatggagta ttctaatact tttcaagata gaaaaataga caagtcttat
     5641 ataatttagg aaaatgaaca tatctttact tatttttact acgatattct ttctatgttc
     5701 gagttcatta aactgatcac cgcaatgatc ctcccgccat ttaatattat tttgctgtgg
     5761 ttgttagcat taatcctctt ttctttaggc tataaatacg ctgcttactt ctttgccttg
     5821 ttaggtattc tgattttata tatcttcagc attccctata cttcacagaa attaggggat
     5881 tcattagtcg aagcagagcc atttaccata gagaaatata aaaatgctca agcgattgtg
     5941 gtgctaggtg gcgggctacg agacagccaa gagttattcg gcaaactggc aattaccggt
     6001 attccgctgg aaagaatgcg ttatgccgct tatctgcata aagaaaccgg cttaccgatt
     6061 ttagcgaccg gaagcagccc aaatgggact tctgaggcaa aggttatggc agatgaattt
     6121 aaaatgttct tcaatattga gaccaaatgg ctggaaaata aggcgaaaac caccaaagaa
     6181 aatgcgattt tcagccgtga gattttagaa aaagagaata ttcataaaat cattcttgtt
     6241 accaaccaat ggcatatgaa acgggctgaa atgctgttta gccaacaagg atttgaggtg
     6301 atgtctgcca gcgtcggttc tggcgatacg cccgatcatt acaaactcaa ctttatgcac
     6361 tttattccgc aagccggtgc aatgaatagc aatatgctgg cattaaaaga gtggattggt
     6421 tattggaaag agaaataacc gaagataaat agcagcaagg caggttttca cctgccttct
     6481 ttttgcaaaa aatcagtcaa aaacaaccgc ttgtctaact aatctcttgt gggtcaatgt
     6541 cgatattcag cctgatatta ttcggaatgt ttaaactttc cctttcttga tcaaaggcat
     6601 cgagtagctg ttgtaatgct cctcggagag ggtgttgaat cagcaataac cagcggtaat
     6661 gtcctgcttt cttcgccatt ggggctgaaa atggtggagg gagctggaag ccttgcccgt
     6721 tttgttgctg gattttttgg ctaaaataat ctgctaattg ctcaagcagc tgtaaggttt
     6781 gttgattatc tttgccggtc gctttgaaca aaacttgcga ggaaaatggt ggcaaactca
     6841 ttaattgcct catttttaac gcctcatcag caaaagctcg gtagccttgt tccagcaagg
     6901 ttttaagcag tgggtgatca gggtaatggg tttgtagcac cacttcgcct tttttctccg
     6961 ctcgccctgc tctgcctgcc acctgtatgt aaagctgtgc taatttttct tccgcacgaa
     7021 aatcagttga aaataacgct gaatccacat taacaatcgc caccaacgtc acattcggga
     7081 aatgatgccc ttttgccaac atttgcgtac caatcaaaat ttggcttttg ccctctcgaa
     7141 tagcggtcaa atggttttcc aatgcacctt tgcgagcggt agaatctctg tctatacgag
     7201 tcacttggta atgagggaat tgctgattta gcacctgctc aagttgttct gtgccgacac
     7261 cggtagttat taaatgggtt gaaccacaat gtccgcattg gcggggaatt accctttggg
     7321 tggcacaatg atggcaacgc aacacttttt gcttttggtg gtaagtaaaa ggcttattac
     7381 acgcctcgca ctcacaaacc caaccgcatt cgtgacaaag taataccggg gcaaagccac
     7441 ggcgatttaa aaacagcatc acttgattgc cttgctctaa ctgggttttc atcattgaaa
     7501 gcaagcgctc cgacaaaccg gcagttaccc gttgcgtttt taaatcaata atctgctgat
     7561 tggcaagttg tgcattgccg gcccgagcgg ttagtgtcag ttcgataaat ttcccgtttt
     7621 gcacattgtg caaactttca agacttggcg ttgccgagcc cagcacaatc ggaatatttg
     7681 catttttcgc cctaaccacc gccaaatccc gtgcgtggta acgccaaccg tcttgttgct
     7741 taaacgagct atcgtgttct tcatccaaga taatcacgcc caatttttga aactgggtaa
     7801 ataaagcaga gcgagtgccg attacaatcg cactttctcc atttttcgcc cgcaaccacg
     7861 catttaaccg ctcagtttcg ttcatattcg agtgcaatac gtcaatttca acgttaaagc
     7921 gagctttaaa gcgttgtacc gtttgcggtg ttagcccgat ttcaggcaca agcagcagca
     7981 cttgttcctc tcgcttaagc accgtttcaa ttaactgcaa atacacttcg gttttgcccg
     8041 agcctgttac gccattgagt aaaaagctcg caaaagtggt ttgtgcattt aaacggctga
     8101 ccactaaggt ttgttgttta tttaagatca gccgattgtt agtatttact aacggaaatt
     8161 cacctagtga gtcttgccac gcttgtgcca taaacggcac atcaattttc tcgatatacc
     8221 ctttttcgag taagcctttc caagcagatg ggctacaagc ggtcggtttt tcaaaatatt
     8281 ttgcacattc ggcaagctcg gttaaccgtt ccacctgctt tttggctttt ttattttcac
     8341 cgataatcag agatttccgc ccttgctccg tcaccacaaa ataattcggt tgaactcgct
     8401 cagtggaatc gccattgcgt aattttatcg gtaaggctcc ggttagcact tcaccaatcg
     8461 gggcgtggta ataacgagcc gcccagttca gcagttgcca catttctgag tcaaaaatcg
     8521 ggctagaatc caacgctgct ttaatcggtt tgagtttttc ggttggcaca tcactagttt
     8581 gcgggaaatc gaccacaatg ccgattttgg tctggcgacc aaaaggcaca accacccgcc
     8641 cgccttggca ggcattgaat gccggcggta gcaaataatc aaaataacga tgtaacggca
     8701 cattcagtgc cactctgatt aatctcactt ctctaaacca attttgattg caagcccgat
     8761 aaatatcgag ccgcagattt tatttaacca atttccaaag gtttgattat gccgtaaaaa
     8821 acgcccaaca ggtgcagcgg ctaagactaa aatacttacc caaataatgc tggtggataa
     8881 aaacgttagc cccaacagca taaaaggtat tttccaaatt actggataca aactgcggca
     8941 ataacgccaa gaaaaagagc aatactttcg ggtttaatag attggtaatc aacccttgac
     9001 ggaatatctt ccatagagga agtttgtcta gattgatttt ctctaacacc aacggctctc
     9061 gccacatttt aatgccgaga tagcagagat aaattgcccc tgcgtatttc agaaaattaa
     9121 ataaagtggg cgaatgtgcc acaatgcctg caagcccgag tgaaaccgca agaatatggc
     9181 ataaaatgcc tgctagaatg ccgaatgaag acattaagcc cgactttttc ccctcagcaa
     9241 tagtgcgagt taaaatatag atagtatccg aacccggtgt aagatttagc agaatacaag
     9301 cggtcaaaaa tccccaataa tttacaatat cactcattat tcacactcaa tttacgttta
     9361 cgctgctgac gaagagcaaa cataccatct aatactaaaa atgaaatgga gatcaacaag
     9421 caaatcatca acaagtaaga ttcatttgct aacctttcgc caattaagaa agacaccacc
     9481 aacatcaata gtggctcaac atagcctaat aaaccaagca aattaaaggg taaaatcgtg
     9541 ctggctagcg tatagctgat aagtgcagtg ccactaatta aacccagtaa tgcaataaaa
     9601 tagtaaatat tgaggttttg tgtttcgaca tattgcatat cggtttgaga gataaaataa
     9661 caagctacag ggagcaaata taaaatttct accacaaagc tatgtaaatg gcttaagcca
     9721 aactttcggc gaaggtaaaa atagattggg taacctgtgc aaacaaataa acttgctatc
     9781 gaaatttttc ccgtaaacaa aatattactc gctacaccaa tgaaagcaac cacaatcgcc
     9841 aaccatttat tcaaggaaag cgtttcttta taaaccactt tgccaaatgc caccataata
     9901 atcggcatta atagatagcc cattgaaacc tcaatcgctt ttccgctatt gggagcccat
     9961 aaaaacagcc acatctgccc gcccacaata gatgccgtga ttaaaataac cagcaataaa
    10021 taaggctctt gctttaggcg ttgaagaaat acccaaaact cattttgttt tttaaataag
    10081 tataaagcaa ggaaaagaaa aggaatcgta accagcatac gaatgccgaa aatgctcaca
    10141 cctgccagcg gttttagaaa gatcgccaaa tagtacatac agccgaataa cactgaggct
    10201 gaaagagata aaagaatgcc ttttaacata gtgataagaa agtaattatt ttttaatttt
    10261 tcaaatctcc cctacccctc ttttctaaag aggattgtcg agttctaaat aaatgaataa
    10321 tgttcggagg taggggcggg tccagtgccc gcccgcaaat taatatcgtt agcggacagg
    10381 cacaggacct gtccctactg atattataga acttacaacc ctgcttttat aaagtggggt
    10441 aaagggagat tcgacttagt cttgacgata ggttttcaag aaattcgcaa ggcgaccaat
    10501 cgcttcttca atttgatgtg cataaggcaa agttaccaca cggaagtgat ccggtttttt
    10561 ccagttaaaa ccggaacctt gcactaatag cactttttct tgtcgcaaca aatcgtagat
    10621 gaatttttgg tcatctttaa tgccgtacat ttcggtatca attttcggga acatatataa
    10681 cgcccctttc gcttttacac agctaatacc cggaatttgt accaataatt cgtgcatttt
    10741 atttcgttgt tccagcaaac gaccgcccgg caacacaaat tcattgatac tttgataacc
    10801 acctaatgcg gtttgaatgg cgtgttgcat cggcgtattg gcacataaac gcatagaaga
    10861 gagcatatcc aacccttcaa taaaaccttt ggcttgatgc ttcggaccgc tcagcaccat
    10921 ccagccctga cggaaaccgg caacacgata cgccttggat aaaccgttat aagttacggt
    10981 taatacgtcc ggtgcaagag cagcaatatg gtgatgtacc gcaccatcat agacaatttt
    11041 ttcataaatt tcgtcagcaa aaataattaa gttatgctga cgggcaagtt ctgcaatttc
    11101 cagcaaaatt tgacggctat acactgctcc ggtcgggtta ttcgggttga taaccaaaat
    11161 ccctttagtg cgaggcgtga ttttcgattt aatatcttca agatcaggga accactcatt
    11221 ttcttcatcg cacaggtaat gcactgcttt accaccggct agggttgaag ctgctgtcca
    11281 taacggataa tcaggcattg gaattagaat ttcatcgcca tcatttaata acgcctgcat
    11341 cgacattgta atcagttcag atacgccgtt gccgatgtaa acatcgttta catccatacc
    11401 acgcatacct tttgattgat aatattgcac aatcgctttg cgggcagaat acaaaccttt
    11461 tgaatcacaa tagccttgtg cggttggaag attacgaatc acatccacta aaatttcatc
    11521 gggtgcttca aagccaaaag gggctgggtt accgatattt aattttaaaa ttttatgccc
    11581 ttcttcttct aagcgaagtg cctctttatg aattggccca cggatatcgt aacgaacctg
    11641 agctaactta tctgatttgg gaaaacgatc cattgtaaac ttcctataat gtattatcta
    11701 attgtagtct catcccgctg ttcaaaaaat cggtaattcg gaatgaattt gtaaacatta
    11761 ctctaatttg ggaggaaaaa aaagaggaaa tacgttaaaa tggagacctt tttttcaatc
    11821 agctaaaaac aagcggtttc tttttctgat ttttttgcaa atgcttattt ttcatcaatt
    11881 aaaacaagaa cttacaaaaa gttactcaaa agtgggaaga gagcaaggat tggtcgccat
    11941 tcaagcctct atgccgctat tggaggcaaa tattccgcta ctcggttggt tgaaaacaca
    12001 aaaaacaagc taccctcact tttttctgca atatcgtgat acagatcaga ccattgccac
    12061 cattggcaca cttcgccaat tttatacgct agaagctgca caatctttta ttcaacaaca
    12121 tcatttcccg ttaatcggcg ggcttcaatt tgaaggcaat acgcaattta ttttgcctca
    12181 attttcattg gtaaaaaatc agcaaaattt aaccgcttgc ttctattttg atagtgataa
    12241 ctttgaacaa caagcggtta tttttgaaca atttcttgca aatttcagcc aaattaccga
    12301 attaggacta acggataatc cgctcgtttc aatgagtgcc accagccatt ttgagcaatg
    12361 gaaagccaat attgaaaaag cgattgtttc tattgagcag ggcgattttc aaaaagtggt
    12421 attggcaaat gcgatgagac ttcattttga gcaacccatt tgtgcttaca gcttgctggc
    12481 acaaagccaa aaaacaaatt taggttgtta ccacttttta tgggcggaaa gtgctgatgt
    12541 tgcctttctt ggctcaaccc ctgagcggct atatcaacgc caagggctac acttttctac
    12601 cgaagccctc gccggcaccg ctgcggttac caccagtgaa gtgcaaaccg aactcaatgc
    12661 acaatggctg ttaagtgatc ccaaaaatat ctatgaaaat caattagtgg ttgatgacat
    12721 tgaaaaccaa ctcaaagatt gcgtgaccga atttgcagta tccgaggcaa aaattaagcg
    12781 tttgcataat gtgcaacacc tacgccgcca aattcaagca acgctcaaac cggacacctc
    12841 agattcagat tgcttaagca aaatccaccc aactgcggca gttgcagggc ttccccgcca
    12901 aaaagcaaag ggttttatta ccgaaaatga gccttttacc cgccattggt atgcaggtac
    12961 attaggcgta atgggcaacg aggaagccga attttgcgta acactccgtt ctgcattaat
    13021 ttcacaaaat tcaattacgc tttatgccgg tgccggcatt gtgtcaggct cagatccaca
    13081 atcggaatgg caagaaatta aacgtaaggc acaaggaatg gcaaaactgt tggatgttga
    13141 tttagtaaca aaaggggaac tgtaagctag gctttcagaa cttaatctct taattatttc
    13201 tttctatatt ttcatttcca acttcccaac aaaatatatt attgccacca aattagtagt
    13261 gaatattcca taa
//
LOCUS       DANLXO010000076        13240 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.076, whole genome shotgun sequence.
ACCESSION   DANLXO010000076 DANLXO010000000
VERSION     DANLXO010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13240
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.076"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            105..1010
                     /locus_tag="PXD69_001866"
     CDS             105..1010
                     /locus_tag="PXD69_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL6284038.1"
                     /translation="MSQKYSVAVIGLGAMGMGAAKSCIAAGLDTYGVDLNPNYLETLK
                     AAGAKKVGTSAVDFAAELDAVLLLVVNANQVNAVLFGENGLAQHLKQGTVVMVSSTIS
                     AQDAKNISQKLTDLGLVMLDAPVSGGAAKAAQGEMTVMASGSSEAFEKLKPVLDAVAG
                     KVYNIGEEVGLGATVKIIHQLLAGVHIAAGAEAMALAARAGIPLDLMYDVVTNAAGNS
                     WMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLRFPLHLASTAYSMFTEASNA
                     GYGKEDDSAVIKIFSGIELPKKEGK"
     gene            1012..2253
                     /locus_tag="PXD69_001867"
     CDS             1012..2253
                     /locus_tag="PXD69_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005754893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL6284039.1"
                     /translation="MLGIIADDFTGASDIASFLTENGLKTVQMNGVPKTTLNSQVDAI
                     VISLKSRSNPVEEAIQQSLQALDWLKQNGCSQFYFKYCSTFDSTEKGNIGPVTDALMA
                     ALDTDFTVVTPALPVNGRTIFNGYLFVGDVLLNESGMRNHPITPMKDANLVRLMDAQS
                     QGKTGLVAYADVIQGAERVKARFAELKQQGYKYAVVDAADNSQLAVLAEAVADFQLVT
                     GGSGLGAYMAAYRSGGKKGTNAFVPSKGKTVVLSGSCSVMTNTQVAAYQQKAPSYFLE
                     AEKAIQDPNYVETLYQWVIANLDGDFAPMVYATVPPEKLKEIQTQFGGDKASHAIENT
                     FAKLAEKLQAAGVTNFITAGGETSSIVVQQLGFSGFHIGKQIAPGVPWLQAVEKPIFL
                     ALKSGNFGKEDFFSFAQEMFV"
     gene            2250..2882
                     /locus_tag="PXD69_001868"
     CDS             2250..2882
                     /locus_tag="PXD69_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HDL6284040.1"
                     /translation="MTEQEQKIEMVNLARSLFERGYTVGGAGNLSVRLDENRILVTPT
                     GSSLGRLEADRLSVLDMQGNVLSGDKPSKESVFHLAMYQKNPACQAIVHLHSTYLTAL
                     SCLENLDTDNAMRAFTPYYVMRVGKLPVIPYYRPGDINIARELGERALDGKAFLLANH
                     GVVVTGSDLRDAVDNTEELEETSKLYFILQGQKVRYLTDDEVNDLKNRGK"
     gene            2884..3660
                     /locus_tag="PXD69_001869"
     CDS             2884..3660
                     /locus_tag="PXD69_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005547735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase family protein"
                     /protein_id="HDL6284041.1"
                     /translation="MPKFAANLTMMFNEVPFLDRFEAAANAGFKYVEYLWPYDYPAAE
                     LKAKLEQYGLKQVLFNTAAGDVAQGEWGVSAIPGREADSHRDIDLALEYALALGCENV
                     HVMAAVVPEGEDREAYKQTFIKNVQYAADKFKPHGINVLLEALSPEVKPNYLLKSQFD
                     TLEIVEAVNRDNVFVQLDYFHAQNVDGNLSRLTDKLKGKFAHIQIASVPDRHEPDEGE
                     INYQYIFNKLDEIGYEGYVGCEYKPRAETTSGLGWFEQYK"
     gene            3713..5071
                     /locus_tag="PXD69_001870"
     CDS             3713..5071
                     /locus_tag="PXD69_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntT protein"
                     /protein_id="HDL6284042.1"
                     /translation="MSNEMLILIGLASVVALLVIMIKGKVHPFLALGLVSIAVALTAG
                     IPMSKVIPTLISGMGSTLGSVALIVGLGAMLGKIIEKSHGADVLANWLLQRFGEKNAP
                     FALGMTGFIFGIPVFVDVGFIVLLPIIFSVARRLGGNILVYSLPIGLAMLLVHVLVPP
                     HPGIVAGAQNLNADIGFVLGIGLVAALPAYLIGQKFIPFFTKNNFVKVVTSTDLLQHQ
                     KDLIKEKGIELPSFGKVLAMISFPLILIMLGTVTATTLPKEHIVREVFSMVGSSPFAL
                     FVAVCLSAYVLGFRYGWTKHKLEEVLESALAPIAGIILITGAGGMFGKVLDASGVGKA
                     LADVLANTGLPLLVLSFILSALLRAAQGSATVATITTTTILAPAAVAAGYNDLQLALL
                     TAAIGAGSMTLSHVNDSLFWVWTKFFNVPVSVGLRTWTFLTTIFGVIAFAVVGIIWML
                     FV"
     gene            5133..6473
                     /locus_tag="PXD69_001871"
     CDS             5133..6473
                     /locus_tag="PXD69_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HDL6284043.1"
                     /translation="MLKKTLLFTLLLSHSLYAEDMIQENKSANITLLAEITAQGQKIN
                     GVALEYPDNVLSGSDLRQLYQVKTALDSAEKENRSVLKAYVNNEPKVTALPQAGKFVI
                     IELDTADKNAATYSVKDANKAPMKFKSKDENGNIVETEKVQAVKIPEFFANRLIYSVE
                     QKGLLKLTSGTTLGKTEWTQTAEPDKIKTPYLDDFVAKQVSLDQSGNKLNYRLYSPLQ
                     KNGEKYPLVIFLHGSGQVGSDNLAHLLSSKGAIATLPYAPSFVLAPQYDQVFDPFDNA
                     AKGQKGGIHWQTENRINLVLKMIDETLKANPQIDTTRIYINGLSRGAEGGLNLLLARP
                     NFFAGALLMSGREAYTNEWVDGNATKTNLAAIKHIPIWFFHSKEDKVSPVKGSRINYR
                     ILKDELNAPNVKYTEFTFEQAGDNGIVNNNPHNTWDAVYNSPEVIGWLLQQKRH"
     gene            6485..7174
                     /locus_tag="PXD69_001872"
     CDS             6485..7174
                     /locus_tag="PXD69_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005577085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDL6284044.1"
                     /translation="MFMYLSHPLDPKDLAWPGEPVVEVTRCTDVGEETPFSSFITKLP
                     NHCGTHMDAPRHFVKDGLSINELPIEYFCHKEVALIEIPKGEAEGITKEDLLPYVDIL
                     SKVSFAFLRTGFEKYRTENPAIYQNECPYISTGAGQYLSDTFPNLKGVGIDFLALGSP
                     SSRVPDAENPKNCHRAILGYYTGRFTTVIEDMHLAELPKNANIKQFFNAPWRIKGLDS
                     SQVTCIVELQQ"
     gene            7331..9148
                     /locus_tag="PXD69_001873"
     CDS             7331..9148
                     /locus_tag="PXD69_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme anaerobic degradation radical SAM
                     methyltransferase ChuW/HutW"
                     /protein_id="HDL6284045.1"
                     /translation="MIIKDTHWTSQQASPNAFPERQALMPIWGGKNIERNQWQSLWLE
                     QAPNALLQDGLAYFHIPFCASHCIFCGFYRNAWKENYSQIYTDRVISELRYESSLWRG
                     QGKIHAVYFGGGTPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKAC
                     IEAGVNRISIGIQTFNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQT
                     DDIWQNDIEIATSLPISGLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAV
                     EKLKAQGWQQVSNNHFAFPNRGERNRYNTLVKSNMPCLAFGSGAGGNFGGLSYQVQSD
                     LKTYLDSPLDQKSLSFLSKHGEHKALLGVIQHSMELGYLDTTPFEQNAKAEKLLQQWE
                     ALDLLKREKNQVYLNTSGRYWSPTLIRKLMLTLPQSSKDNNMITPLTKELENKLRTNL
                     KENPGQILEMLAGMNQCSLESVINCLPKEMVMQTGGERFVEIMQAIAGWNEAVTFIIH
                     TPDAIAEVTAKLPQGKIGRGFYNFEHGVDGGIHGHLRYENCAAIYLLDRPFMGKRTVA
                     LTFINQSGEAMFKIFVGRDEQGQLRENQIQAMRKLIGGC"
     gene            9151..9768
                     /locus_tag="PXD69_001874"
     CDS             9151..9768
                     /locus_tag="PXD69_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6284046.1"
                     /translation="MILVCGANGLLGRAICDKLPREKTIAVLRKDAMDTFFSERNIAV
                     EIADLLDLESCNALLQKTQPEILITVVGGKNEQGIRSDKTANINLIKAVEKYSPTTKV
                     VLVTSVGCAEQWDLISPLAQQALGEALKAKTEAEAYLQQTALNWLIIRPGGLNNDEVN
                     DEYQIVRDLPNERKMYVSRKSVATGIVRLLDSTENHQIFSIINRG"
     gene            complement(9852..10463)
                     /locus_tag="PXD69_001875"
     CDS             complement(9852..10463)
                     /locus_tag="PXD69_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentahemic C cytochrome"
                     /protein_id="HDL6284047.1"
                     /translation="MKSLSKIAFCFLAFIMPTFCFAGSNSYTTETIPLFADENLTQKI
                     GQLEAGAEIKLVQTTAKAAEIELNLWRKSKGFGRIWYHSFSKNITDAVFEKSFISNNP
                     LLEIVESKEDPNTGLVWQKVKMNVWVENAEFTQDLTNFWANTKNTYKTECSVCHKQRD
                     PKMHDANEWIAVFNGMVGFTDMDEATQKKVLRYLQMNAASSSQ"
     gene            10658..11566
                     /gene="glyQ"
                     /locus_tag="PXD69_001876"
     CDS             10658..11566
                     /gene="glyQ"
                     /locus_tag="PXD69_001876"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDL6284048.1"
                     /translation="MSTKFNVKTFQGMILALQDYWASKGCTIVQPFDLEVGAGTSHPM
                     TCLRALGPEPMAFAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLDS
                     LKMLGFDPTQNDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPV
                     TGEITYGLERLAMYIQGVDSVYDLVWSDGELGKTTYGDVFHQNEVEQSTYNFEYADVD
                     FLFQCFEQYEKEAQYLLGLEKPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILR
                     IRALTKGVAEAYYASREALGFPGCKK"
     gene            11646..11906
                     /locus_tag="PXD69_001877"
     CDS             11646..11906
                     /locus_tag="PXD69_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284049.1"
                     /translation="MKPILYFADWCPDTAPFVAELDRLGIEYEPCDITKGGSTLKPFL
                     KLRDTHSAFDHAKANGYIGIPALLIEGEKVVLDLAELEGIFG"
     gene            11949..12983
                     /locus_tag="PXD69_001878"
     CDS             11949..12983
                     /locus_tag="PXD69_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL6284050.1"
                     /translation="MKTVIADNSAEFVNEISQLIQSSKQRMTVAVNAELTLLYWHIGK
                     RINDYILQGERAEYGQEVVKNLAQSLTEQFGKGWSKRHLNYTMQFATTFPNLEIVHAL
                     RAQLSWTHFKQIIHIDDPTKRGFYATMAAQERWSTRTLEDRIGSLLFERTAISKKPDE
                     TIIAELSLLREKGEYNQSMVLKDPYILDFLDLNDRYMERDLEDAILREIEQFLLELGA
                     GFTFVARQKRIQIDNDDFYIDLLFYNRKLKRLIAIELKTESFKHSHKSQMELYLAWLA
                     KYEQEADENPPLGMILCTGKKQEQVELLDLKNSDIHIAEYMTVLPSKAVLEQRLHLAV
                     ERAKERFLLK"
BASE COUNT         3932 a         2596 c         2986 g         3726 t
ORIGIN      
        1 ttcacattta ttgttaatat ttgtgatctt catcacagat tttatctttt ctattggtta
       61 atataccgcc atcaagttca ttaatttatt tgagggaata aacaatgagt caaaaatata
      121 gcgtagccgt catcggctta ggagcaatgg gtatgggagc agcaaaatct tgtatcgctg
      181 ccggattaga cacatacggt gtggatctta acccgaatta tctggaaacc ttaaaagcag
      241 caggtgctaa gaaagtcggc acaagtgcgg tcgattttgc cgctgaatta gatgcggtgt
      301 tgttgttggt ggttaatgcc aaccaagtga atgcggtgtt attcggtgaa aacggcttag
      361 cccaacattt gaaacaaggt acggtggtga tggtatcttc caccatttct gcacaagatg
      421 caaaaaatat ttcacagaag ttaacagatt taggcttggt gatgttagat gctccggttt
      481 cgggtggggc agcaaaagca gcacaaggtg aaatgactgt gatggcatca ggttccagcg
      541 aggcattcga gaaattaaaa ccggtattag atgcggttgc aggcaaagtg tataacattg
      601 gcgaagaagt cggcttgggt gcaacggtaa aaattatcca tcaattactt gccggtgtgc
      661 atattgccgc aggtgcagaa gcaatggcat tggcggctcg tgccggtatt ccgcttgatt
      721 taatgtatga cgttgtaacc aatgcggcag gcaattcttg gatgtttgaa aaccgaatga
      781 aacacgttgt tgagggcgat tacaccccac tctctatggt ggatattttt gtgaaagatt
      841 tgggattggt gaacgacacc gcaaaatctt tgcgtttccc gcttcactta gccagcaccg
      901 cttattctat gtttaccgaa gccagcaacg caggttacgg caaggaagat gatagtgcgg
      961 tcattaaaat tttcagtggt atcgaattac ctaaaaaaga ggggaaataa gatgttaggc
     1021 attattgcag acgatttcac cggtgcgagt gacatcgcca gtttcttaac cgaaaacggg
     1081 ctaaaaacgg tgcaaatgaa tggtgtgccg aaaactacac ttaacagtca agttgatgcg
     1141 attgtgatta gcctgaaatc tcgctctaac cctgtggaag aagcaatcca acaatcatta
     1201 caagccttag attggctgaa acaaaatggt tgctcgcaat tctactttaa atattgttcc
     1261 acttttgaca gcacggagaa aggcaatatc gggccggtaa ccgatgccct aatggcggca
     1321 ttagataccg attttaccgt agtcacaccg gctctgcctg tcaatggcag aaccattttc
     1381 aacggctatt tgtttgtggg cgatgtgcta ctgaatgaat ctggtatgcg taaccacccg
     1441 attaccccga tgaaagatgc caacttggtg cgtttaatgg atgcacaatc tcaaggcaaa
     1501 accggcttgg ttgcctatgc tgatgtgatt caaggggcag agcgtgtgaa agcccgtttt
     1561 gctgaattga aacagcaagg ctacaaatat gcggtagtag atgctgccga taattcacaa
     1621 cttgcggtgc ttgccgaagc ggttgccgat tttcaattag tcacaggcgg ttcaggctta
     1681 ggggcttata tggcggctta ccgttcaggc ggcaaaaaag gcacgaatgc gtttgtacca
     1741 agcaaaggca aaaccgttgt gctttcgggt tcttgctcgg taatgaccaa tacccaagtg
     1801 gcggcttacc agcaaaaagc cccaagttat ttcttagaag cggaaaaagc cattcaggat
     1861 ccgaactatg tagaaacgct ttatcaatgg gtgattgcaa acctagacgg tgactttgcc
     1921 ccaatggttt atgccaccgt tccccctgaa aaattgaaag agattcaaac ccaattcggc
     1981 ggcgataaag ccagccacgc cattgaaaat acctttgcca aattagccga aaaattacaa
     2041 gccgcaggcg taactaactt tattaccgca ggcggtgaaa cttcgagcat tgtggttcag
     2101 caacttggat tcagcggttt ccacatcggc aaacaaattg caccgggcgt gccgtggtta
     2161 caagcggtcg aaaaaccgat ttttcttgca ttgaaatcgg gtaacttcgg taaagaagat
     2221 ttcttcagtt ttgctcagga gatgtttgta tgacagaaca agaacaaaag attgaaatgg
     2281 tcaatcttgc ccgctcgctg tttgagcggg gctataccgt tggcggtgcg ggcaacctct
     2341 ccgtgcgttt agatgaaaat cgcattttag ttaccccaac cggctcttcg ctcgggcgtt
     2401 tagaggcaga ccgcctttcc gtattggata tgcagggtaa tgttctttca ggagataaac
     2461 cttcaaaaga atcggtattc cacttggcga tgtatcagaa aaatccggct tgccaagcaa
     2521 tagtgcatct gcattccact tatttaaccg cactttcttg cttggaaaat ttggataccg
     2581 acaacgctat gcgtgctttc accccttact atgtgatgcg ggtaggaaaa ttgccggtca
     2641 ttccttacta ccgtccgggc gacatcaaca ttgcccgaga gctgggggaa cgagccttag
     2701 acggcaaagc ctttttactg gcaaatcacg gggtggtagt cacaggttca gacttgcgtg
     2761 atgcggtgga taacacagaa gagttggaag aaacctccaa gctctatttt attctacaag
     2821 gtcaaaaagt ccgttatctc accgatgacg aagtcaatga tctgaaaaac agaggaaaat
     2881 aaaatgccta aatttgcagc aaaccttacg atgatgttta acgaagtgcc gtttttagat
     2941 cgttttgaag cggctgccaa cgctggattt aaatatgtcg agtatttatg gccttatgat
     3001 tatccggcag cagaattgaa agccaaactt gagcaatatg gcttaaaaca ggtgttgttc
     3061 aataccgcag ccggagatgt tgctcaaggt gaatggggtg tttctgccat tccggggcgt
     3121 gaagctgata gccatcgtga tattgattta gcgttggaat atgccctcgc cttaggttgt
     3181 gagaatgttc acgttatggc agcggtcgtg ccagaaggcg aagatcgtga agcctataaa
     3241 caaaccttta tcaaaaacgt gcaatatgcc gccgataaat tcaaaccgca cggcattaac
     3301 gtcttgcttg aagccctaag ccctgaagtg aaaccgaatt atctgcttaa aagccagttt
     3361 gatacgctag aaattgtgga agcggtaaac cgagacaatg tgtttgtaca gcttgactac
     3421 ttccacgcac agaatgtgga cggcaactta tctcgcctaa ccgacaaact caagggtaaa
     3481 tttgcccaca ttcaaattgc ctctgtgcca gatcgccacg aaccggacga aggggaaatt
     3541 aactaccaat atatcttcaa caaactcgat gaaatcgggt atgaaggcta tgtaggttgc
     3601 gagtataaac cacgagcgga aaccacctca ggactaggtt ggtttgagca gtataaataa
     3661 ccacgatgat tagcggataa atacgtgaat acaacattta gaaggaaact ttatgtcaaa
     3721 tgaaatgtta attttgattg gattagcaag cgtagttgct cttctggtca ttatgattaa
     3781 aggtaaagta cacccattct tagcattggg gttagtgagt atcgcagttg ccttaactgc
     3841 aggtattcca atgagtaaag tgatcccaac cttgatttca ggtatgggaa gtactttagg
     3901 tagcgttgca ctcatagtag gtttgggagc aatgttaggg aaaatcattg aaaaatctca
     3961 cggtgcggat gtattagcaa attggttgtt acagcgtttt ggtgagaaaa acgctccctt
     4021 tgcattaggt atgacaggtt ttatattcgg tattcctgtt ttcgttgatg ttggttttat
     4081 cgtattgctc ccgattattt ttagtgtagc gagacgttta gggggaaata tccttgttta
     4141 ttctttgcca atcgggcttg cgatgttact tgttcacgtt ttagttccac ctcatccagg
     4201 tattgtagcg ggtgctcaaa acttaaacgc agatattggc tttgtattgg gaattggctt
     4261 agtagcagcg ctacctgcat atttaatcgg tcaaaaattt attccgttct ttacaaaaaa
     4321 taatttcgta aaagtagtaa cttcaaccga tcttttacag caccaaaaag atttgattaa
     4381 agagaaaggc attgaactac cttcttttgg taaagtgtta gcaatgattt ctttcccgct
     4441 aatcctgatt atgttaggta cagtaacggc aacaaccttg ccgaaagaac atatcgtgcg
     4501 tgaagtattc agtatggtag gaagctctcc gtttgcctta tttgtggctg tttgtctttc
     4561 tgcttatgta ttaggtttta gatacggttg gactaagcat aaattagaag aagtactgga
     4621 gtctgcgtta gcaccgattg cggggattat tttaatcacc ggtgcaggcg gtatgttcgg
     4681 taaagtgtta gatgccagtg gcgtaggtaa agcattagca gatgtattag ccaacacggg
     4741 cttaccgtta ttggttcttt ctttcatact ttctgcatta ttgcgtgcag cacaaggttc
     4801 tgcaacggtg gcaactatta ctactacaac tattctagct cctgcagctg tagcagcagg
     4861 ttataatgat ctgcaattag cacttcttac tgcagctatt ggtgcaggtt ctatgacatt
     4921 atcccacgtg aatgattcac tcttctgggt atggacgaaa ttcttcaatg ttcctgtatc
     4981 cgtaggctta agaacttgga cgtttttaac gactattttc ggtgtaatag cctttgccgt
     5041 tgttggcatt atttggatgt tattcgttta atatcactct gttactgctt aaaatccacc
     5101 tcttatgagg tggatttttt taggagaaac ctatgctgaa aaaaacactt ttatttacgc
     5161 tattactttc tcactccctc tatgcagagg atatgattca ggaaaataaa tcagcgaata
     5221 ttacgttgct tgccgaaatc accgctcaag gtcaaaaaat taacggcgtg gcattggaat
     5281 atcctgataa tgtcttatca ggcagcgatc ttcgccaact gtatcaggtc aaaacggcat
     5341 tagatagtgc ggagaaagaa aaccgttcgg tgctcaaagc ctatgtcaat aatgagccaa
     5401 aagtgaccgc acttccgcaa gccggtaaat ttgtgattat tgaattggat acggcagata
     5461 aaaatgcggc aacttatagc gtaaaagatg ctaataaagc gccgatgaaa tttaaatcca
     5521 aagatgaaaa cggcaacatt gtagaaacag agaaagtaca agcggtcaaa attccagagt
     5581 tttttgcaaa tcgcctaatc tattcggtgg aacaaaaagg cttgcttaaa ttaaccagcg
     5641 gcacaactct aggcaagact gaatggacac aaaccgctga acccgacaaa atcaaaaccc
     5701 cttatctcga tgattttgtc gcaaaacaag tgagcttaga ccagtctgga aataaactga
     5761 actaccgtct ctattcgcct ttgcaaaaaa atggtgaaaa atacccgctt gtgattttcc
     5821 tacacggttc agggcaagtc ggttcggata accttgctca cctgctttcc agtaaagggg
     5881 cgattgccac cctgccttat gccccaagtt ttgtacttgc tccgcaatac gaccaagtat
     5941 tcgacccatt tgataatgcc gccaaagggc aaaaaggcgg tattcactgg caaacggaaa
     6001 atcgtatcaa tctcgtgtta aaaatgattg atgaaaccct aaaagccaat cctcaaattg
     6061 ataccacacg catttatatc aatggcttat ctcgaggtgc tgaagggggc ttaaatctgt
     6121 tgttggctcg cccgaatttc tttgccggag cattattaat gagcggtcgt gaagcctaca
     6181 ccaacgaatg ggtggacggc aatgccacca aaacgaattt ggcggcaatt aaacatatac
     6241 cgatttggtt tttccatagt aaagaggaca aagtctcgcc ggtaaaaggt tctcgcatta
     6301 actaccgcat tctcaaagat gagttaaatg cccccaatgt gaaatatacc gaattcactt
     6361 ttgaacaagc cggcgacaac ggcattgtca ataataaccc tcataatact tgggacgctg
     6421 tgtataacag ccctgaggtg attgggtggt tacttcagca aaaacgccac taaggaggct
     6481 cactgtgttt atgtatttgt ctcacccgtt agatcctaaa gatttagctt ggccgggaga
     6541 acctgttgtt gaggtgactc gctgcacaga cgtaggtgaa gaaacgccat ttagcagttt
     6601 tatcacgaaa ctaccgaatc attgcggcac acatatggac gctcctcgcc actttgtgaa
     6661 agacggttta agtatcaatg aattgccgat agagtatttc tgccataaag aggtcgcttt
     6721 aattgaaatt cccaaaggag aggcagaagg gatcaccaaa gaagatttat tgccttatgt
     6781 cgatattctc tccaaggtgt cttttgcctt tttacgaacg gggtttgaga aatatagaac
     6841 cgagaaccct gctatttatc aaaatgaatg cccctatatt tcaaccggtg ccgggcagta
     6901 tttatctgat actttcccga atttgaaagg agtaggcatt gatttcttgg cactagggtc
     6961 tccttcttcc cgagtgcctg atgcggaaaa ccctaaaaat tgccatcgag cgattttagg
     7021 ctactatacc ggcaggttta ccactgtgat tgaagatatg cacttagcgg aactccctaa
     7081 aaatgccaac attaagcagt tttttaatgc accgtggcga attaaagggt tagattccag
     7141 tcaagtgact tgtattgtgg aattacagca ataaaccaca gatatattca ttttaggaga
     7201 ggctatttac tatagtaagc ataactcaat cattaattga aaataattat tatttgattt
     7261 taatcaagtc attcataact taattttgtt ataaatatga ccttgtttat agcactattt
     7321 tgtttcgata atgattataa aagatacaca ctggacatct caacaagcct ctccaaatgc
     7381 tttcccagaa cgacaggcac ttatgcctat ttggggtggg aaaaatattg aacgcaatca
     7441 atggcaatct ttatggctgg aacaagcacc aaatgcgtta ttacaggatg gtttagctta
     7501 tttccatatt ccgttttgcg ctagtcattg tattttttgt ggtttttatc gcaatgcttg
     7561 gaaggaaaat tatagccaga tttatactga tcgtgtgatt agtgaacttc gatatgaatc
     7621 ttcactatgg cgaggacaag gtaagattca tgccgtttat tttggtggag gaacgccaac
     7681 agcgttacat acagaagatt tagtacgatt gattcgagct tgttatcgtt atttgccact
     7741 cgctgaagac tgtgaattta ctattgaggg tagaattagc cattttgata tagataaggc
     7801 taaggcttgt attgaagcag gcgtgaaccg tatttctatt ggtattcaga cttttaactc
     7861 cgaaattcgc aaacgtttag ggcgcaaaca tagtggcgaa gaggctcaaa cttatttaaa
     7921 agccttatcg gaattaaatg ctgtgattgt tgctgattta atttttggct tgccaaacca
     7981 aacagatgat atctggcaaa acgatattga aattgcgact agtttaccga tctcaggctt
     8041 agatatttac gcctttaata attatccttt cctgcctatt aatcgcttaa ttgaacatgg
     8101 aaaattacct gcgcccgcag ggtttgacac ccaaagctta cactatgctt atgcagtaga
     8161 gaagttaaaa gcacaaggtt ggcagcaagt gagcaataac cactttgctt ttccaaatcg
     8221 aggtgaacgc aatcgctata atactttggt taaatcgaat atgccttgtt tggcatttgg
     8281 ctccggtgcg gggggaaatt ttggtgggct gagttaccaa gtacaatctg atttaaagac
     8341 ctacttagat tcgcctcttg atcagaaaag cctttctttt ttgagtaaac atggtgaaca
     8401 taaagcactg cttggtgtga tacaacatag catggaattg ggttacttag atacaacgcc
     8461 ttttgaacaa aatgcgaaag ctgaaaaatt attgcaacaa tgggaagcgc ttgatttact
     8521 gaagcgtgaa aaaaatcaag tatatctcaa taccagtggt cgttactggt caccaacatt
     8581 aattcgtaaa ctaatgttaa cacttcctca atcaagtaag gataacaaca tgataacgcc
     8641 attaactaaa gaattagaaa ataaattgcg gacaaattta aaagaaaacc cagggcaaat
     8701 tttagaaatg ctggcaggaa tgaatcaatg tagcttggaa tcggtaatta actgtctgcc
     8761 caaagaaatg gtaatgcaaa caggtggtga gcgttttgtg gaaattatgc aggcaattgc
     8821 tggttggaat gaagctgtga cttttattat tcatacgcct gatgcgattg cagaggtaac
     8881 tgctaaattg ccacaaggta aaattgggcg aggtttttat aattttgaac atggtgtaga
     8941 tggaggaatt cacggtcatt tacgctatga aaattgtgct gctatttact tacttgatcg
     9001 cccatttatg ggaaaaagaa cggtggcgtt aacttttatc aatcaaagcg gtgaggcgat
     9061 gtttaagatt tttgttgggc gtgatgaaca aggtcaatta cgagaaaatc agattcaagc
     9121 catgcggaaa ttaattggag gatgctagtc atgattttgg tttgtggggc aaatgggttg
     9181 ttaggacgag caatctgtga caaattacct agagagaaaa cgatagccgt cttacgaaaa
     9241 gatgctatgg atacgttttt cagcgaacga aatatagcag tagaaatagc agatttatta
     9301 gatttggaat cctgcaacgc cttgttacaa aaaacacaac cggaaatctt gattacggta
     9361 gtaggaggaa aaaatgaaca aggtattcgt agcgacaaaa cagcaaatat taatttgata
     9421 aaagcagttg aaaaatattc accaactacg aaagtagttt tagttactag tgttgggtgt
     9481 gcagaacaat gggatttaat tagcccatta gcacagcaag ctttaggtga agcactaaaa
     9541 gccaagacgg aagctgaagc ttatttacag caaacagcat taaattggct gattattcga
     9601 cccggtgggt taaataatga tgaagtaaat gatgagtatc agattgtgcg tgatttacct
     9661 aatgaacgga aaatgtatgt aagccgtaaa tctgtcgcaa caggcatagt gcgtttactg
     9721 gatagtacgg aaaatcatca aatcttctct attattaata ggggatagta tatttcaacg
     9781 aaggcaagcg ggcatatttt atggttattt tgcaactata aaacagaccg cttgtgagat
     9841 ctttttctat tttattgaga actggatgcc gcattcatct gcaagtagcg aagcaccttt
     9901 ttctgggtag cttcgtccat atcggtaaaa ccgaccattc cgttaaatac tgcaatccat
     9961 tcgtttgcat catgcatttt aggatcacgt tgtttatggc acacgctgca ttctgtttta
    10021 taggtatttt tggtgttcgc ccaaaagtta gtgagatctt gggtaaattc ggcattttcc
    10081 acccacacgt tcattttcac tttttgccat accaagccgg tgttcggatc ttccttgctc
    10141 tctacaatct ctaacagtgg gttgttgctg ataaaagatt tctcaaatac cgcatcggta
    10201 atatttttac tgaaagaatg ataccaaatc cgcccgaaac ctttgctttt tcgccataaa
    10261 ttcagctcaa tttcagcggc ttttgcggtt gtttgcacca atttaatttc tgctccggct
    10321 tctagctgcc cgattttctg tgtcaaattt tcatcggcaa ataaagggat tgtttccgtg
    10381 gtgtaactgt ttgaaccggc aaaacaaaat gttggcatga tgaatgccaa gaaacagaaa
    10441 gcgattttcg ataatgattt catcataaac cccacaaatt agatgagaaa ttaggttata
    10501 tgttacacaa attgagcaaa aaagcgttga tttacatcat aaaactgatt ttatgtcgat
    10561 ttcttaattt tttgcaaaaa aatcccaaaa aatgactgct tacaagctat aataaccagt
    10621 atttttcgac catttttcaa attcaagaga aaataaaatg agtacaaaat tcaacgtaaa
    10681 aacctttcaa ggaatgattt tagccctgca agactactgg gcaagcaaag gttgcaccat
    10741 tgtgcagccg ttcgatttag aagtgggggc aggcacctcg cacccaatga cctgcctgcg
    10801 tgcgcttggc cctgagccaa tggcgtttgc ctatgtgcaa ccatctcgcc gcccgacaga
    10861 cggtcgctac ggcgaaaatc cgaaccgttt acagcactac taccagttcc aagtggtgat
    10921 taaaccttcg ccggataaca ttcaagaact ttacctcgac agcctgaaaa tgctcggttt
    10981 cgacccaacc caaaacgaca ttcgttttgt ggaagacaac tgggaaaacc caacgcttgg
    11041 ggcgtggggc ttaggttggg aagtgtggct gaacggaatg gaagtgaccc aattcaccta
    11101 cttccagcaa gtcggcggct tggaatgtaa accggtgaca ggcgaaatca cctacggctt
    11161 agagcgtttg gcgatgtaca ttcaaggcgt ggacagcgtg tacgacctcg tgtggtctga
    11221 cggcgaactc ggtaaaacca cctacggcga cgtattccac caaaacgaag tggagcaatc
    11281 cacctacaac tttgaatacg ctgatgtgga cttcctgttc caatgcttcg agcagtacga
    11341 aaaagaagcc caatacctgt taggcctaga aaaaccattg ccattgccgg catacgaacg
    11401 cattttaaaa gccgctcaca gctttaactt attagatgct cgtaaagcga tctcggtaac
    11461 tgaacgccaa cgctacattc tacgcattcg tgccttaacc aaaggcgttg ctgaagcgta
    11521 ctatgccagc cgtgaagcgt tggggttccc ggggtgtaaa aaataatcgt agggacgcca
    11581 cgcttggcgt ccgtcaataa attacaaaac ggacacgaag catcgtgtcc ctacaaggat
    11641 ttacgatgaa accgatttta tacttcgccg attggtgtcc ggataccgcc ccatttgtgg
    11701 cagaactaga ccgcttgggc attgaatatg agccgtgcga catcaccaaa ggaggctcaa
    11761 cacttaaacc atttttgaaa ctgcgagaca cgcattctgc ctttgaccac gccaaagcca
    11821 acggctatat tggcattccg gcattgctga tcgaaggcga aaaagtcgtg ctggatttgg
    11881 ctgaattaga gggtattttc ggctaacaag cggttgaatt tggcggaaat gttgcaaagg
    11941 agccaataat gaagacagta atagcagata attcggctga atttgtgaat gaaatttcac
    12001 aacttattca atcgagtaag caacgaatga ccgttgcggt taatgcagaa ttaaccttgc
    12061 tttattggca tatcggaaaa cggatcaatg actatatttt gcagggtgaa cgtgcggaat
    12121 atgggcaaga agtggtgaaa aatcttgctc aaagtctgac ggagcaattt ggtaaaggtt
    12181 ggagtaaacg ccatttaaat tatacaatgc aatttgctac aactttccct aatttggaaa
    12241 ttgtgcacgc actgcgtgca caattaagct ggacacattt taagcagatt attcatattg
    12301 atgatccaac aaagcgaggg ttctatgcaa caatggctgc acaggagcgt tggagtacaa
    12361 ggacattaga agatcgcatt ggctcattat tgtttgaacg cacggcaatt tccaaaaagc
    12421 ccgatgaaac cattattgct gaattgagtt tgctacgtga aaaaggcgaa tataatcagt
    12481 caatggtgtt gaaagatccc tatattttgg attttctcga ccttaacgac cgttatatgg
    12541 aacgtgatct cgaagatgcg attctacgag agatcgaaca gtttttactg gaacttgggg
    12601 cgggttttac ctttgtcgcc cgccaaaaaa ggattcagat tgataatgat gatttctata
    12661 tcgatctgct gttttataac cgtaaactca aacgcctgat tgcgattgaa ctaaaaaccg
    12721 aaagcttcaa acattcccac aaaagtcaaa tggaactcta tttggcgtgg ctggcgaaat
    12781 acgagcaaga agcagacgaa aacccaccgc ttggaatgat tctctgcacc ggtaaaaagc
    12841 aggagcaagt ggaattgttg gatttgaaaa attccgatat tcatattgcg gaatatatga
    12901 ccgtgttgcc gagtaaagcg gtattggaac aacggttgca tttggcggtg gaaagggcga
    12961 aagagcggtt tttactaaaa tagcaagcgg ttaaaatcag cggaaatgtt gcaaaatgaa
    13021 agtatgatgg aaacgatttg gttgcatatt ccgttggtgg gtggttagag attttcaaat
    13081 ctcccccctc cccctctttg gctaaagagg gggcgatcat ttagtgagta attttaattc
    13141 atctgactat ttacaatctt aatgaagaaa gatgaattat aaatttacga agatcaaatt
    13201 ccccttttta gcaaagaggg gctaggggag atttggcaga
//
LOCUS       DANLXO010000077        13217 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.077, whole genome shotgun sequence.
ACCESSION   DANLXO010000077 DANLXO010000000
VERSION     DANLXO010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13217
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.077"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..2566
                     /gene="topA"
                     /locus_tag="PXD69_001879"
     CDS             <1..2566
                     /gene="topA"
                     /locus_tag="PXD69_001879"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDL6284051.1"
                     /translation="KKINQYLGSNYVVKSSVGHIRDLPKSGSDEKTEKAKPISTKGLT
                     AAEKAKIKAEKERVALVKRMGIDPYNGWKANYQILPDKEKVVSELKSLAKKADHIYLA
                     TDLDREGEAIAWHLREIIGGDDSRFSRVVFNEITKDAIKKAFDDPQPLNIDRVNSQQT
                     RRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQSEEFWTILAN
                     TQINRKKLPLELTTYKGKKFSASNEAEANVAVRALEQSDFIVSNIEAKETSSRAAAPF
                     ITSSLQRAASTRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSREALAMARGYIQDN
                     FGANYLPEKANVYRSKDNAQEAHEAIRPSDVNVKMADLKGMDKDAERLYDLIWRRFLA
                     CQMLPARYDSTAVTVSAGDYELKANGRVLRFDGWTKVLPVQGKNPEDQELPAVELHQK
                     LTLDEIVPSQHFTKPPARFNEASLVAELEERKIGRPSTYASIISTIQERGYVRTENKR
                     FYVEKIGEVVTDRLNESFKDLMNYDFTANMEEVLDQIAEGSKNWKEELNTFFKHFSEE
                     LSQAELDELEGGMKPNSLVPTDIDCPTCGRKMAIRTASTGVFLGCTGYALPPKERCKT
                     TMNLIPEAEFFNVLDSDSETKALMARKRCPKCDSAMDSYVIDAERKLHVCGNNPNCDG
                     HIIEQGSFKIKGYDGPVVECDKCGSDMHLKLGRFGKYMGCTSCDNTRKILKNGEVAPP
                     KEDPIAFPELKCEKADAYFVLRDGASGVFMSAHNFPKVRESRAPKVVELAQYRERLPE
                     KLQYLADAPQQDPEGNEAIIRFSRKEKRQYVTSEKNGKATKWIVDYLDGKWVERKK"
     gene            complement(2616..3554)
                     /gene="yvcK"
                     /locus_tag="PXD69_001880"
     CDS             complement(2616..3554)
                     /gene="yvcK"
                     /locus_tag="PXD69_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HDL6284052.1"
                     /translation="MENTDIIPFKPTRHHYLNQLNAVVALGGGHGLGRLLSALSFLKE
                     RLTGIVATTDNGGSTGRIRSQQGVIAWGDLRNCLNQIIVKPTIASRLFEYRFAGTGEL
                     AGHNLGNLILTALENMQIRPLEGINLVRELLHVRSQLIPMSEIPVHLIAQLHSGESVF
                     GEVQIDSLAETPQHLALDTMVVATPEAISAIQSAELILLGPGSFFTSIMPNLLVAGIA
                     NSIAQSKARVVFIDNIGQEHGPAGQLSLNQRIEWMENCIGQARINAVITTDDAGSELP
                     EHIQILRKNLSANDVYYRHDRNKLSKAIDELLAQNI"
     gene            complement(3568..4644)
                     /locus_tag="PXD69_001881"
     CDS             complement(3568..4644)
                     /locus_tag="PXD69_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL6284053.1"
                     /translation="MFQMLQDWYRKKFTDPQIVVLFSILLIGFGIIYFFSDLLMPLLV
                     ALVFAYLLEWPIRFLSSKLKLPRTLSVILVLGGFIALLSFLGVVLLPSLWNQAVTFIQ
                     DLPSMFNLLNAWLQALPEHYPELVDYATLDSIVNTAKSNILSMGESLLTLSINSIISL
                     VGLGIYTFLVPLMVFFLLKDKIVLMRSFSKVLPQNRRLATRVWFEMQQQIANYIRGKF
                     LEILIVGVVTYIIFLFFDLRYPLLLSVAVGISVLVPYIGAVLVSIPVMLIALFQFGLS
                     PDFYYLMLAFIISQLLDGNLLVPFLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIP
                     LATLVKAVLQALPSAQSDAIILEK"
     gene            complement(4675..5430)
                     /locus_tag="PXD69_001882"
     CDS             complement(4675..5430)
                     /locus_tag="PXD69_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6284054.1"
                     /translation="MKKEEVGHHFLARLGKTRLRPGGKLATDWLIANGDFDKNKKVLE
                     VACNMGTTAIQLAQQFECQIVGIDLDEDALEKARKNIKENHVEHLIQVQRANATKLPF
                     DDESFDIVINEAMLTMLPLEAKEKAIREYFRVLKPNGFLLTHDIVIQDKDSDTLLAEL
                     RDAINITVSPLAKADWKSLFQRCGFRNVDTFSGEMSLLSPKGLIHDEGVLGAMKIIGN
                     ALKPENRETFNKMYKLFNDPDKKLGFIAVCSQK"
     gene            5582..5791
                     /locus_tag="PXD69_001883"
     CDS             5582..5791
                     /locus_tag="PXD69_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HDL6284055.1"
                     /translation="MSKQKNDYLHQRGQIKESAVKALVTDPLFRQRVERNRKGKGSYR
                     RQEKHKKTIYGQKETPFKNIRLESF"
     gene            complement(5840..6562)
                     /gene="bioD"
                     /locus_tag="PXD69_001884"
     CDS             complement(5840..6562)
                     /gene="bioD"
                     /locus_tag="PXD69_001884"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDL6284056.1"
                     /translation="MPSLFITGTDTNVGKTVVTRAIIQTLTKHSFPVIGYKPIACGGD
                     DSLPTEPTQYDYATEDNSDVLTILDSCPTNVSYRDINSYTFIHSSTPVFAALDAVHHI
                     QLEKLNTDLKRLENAYPNVVVEGTYGWLTPINKDYYFADWVMQNNMPVVLVVGIKEGC
                     VNHALLTANEILQRGVKLVSWVANRVNPGLRHYHELIELLTQKINAPLLGQIPYMGHP
                     EHKELSSYIQNPEPLLAYFSKP"
     gene            complement(6610..7797)
                     /locus_tag="PXD69_001885"
     CDS             complement(6610..7797)
                     /locus_tag="PXD69_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDL6284057.1"
                     /translation="MFSDNKALHLGKIYHLIEQFELISRTDLAKLSGLAPASVTNLTK
                     ILIDNHFILERTVQTTLSRGRPSVGLAVSNFFWQLLCVTVSSHKIEISLCKLNGAEIY
                     KQDYTISAENYPRLNDFILNFITNFRQLYCVNTSQLLAVSISVIGKINAEKDSITQLG
                     NKNIFCNITSKLSPLFHCPILLSEHFQLWLLAESTVGSLINQDNAIFLQLDDTVNLSV
                     LLSGSLLSKQSKMNVDNMLMPRFSHLSDEIFPELDEIHRYKLVNQVTFPAIVRLIDRY
                     LPNNLKSQEQKISWLCQKIDENQPLALAILSHITDNLAYALMNLVNIFSSEKIMLNSP
                     LIKIKEPLFTQISEKLHKNLLQTNLKIDLVTSQYDWNSPLIACSAIKQGIYDGNLIKD
                     RIN"
     gene            7931..9049
                     /gene="rnd"
                     /locus_tag="PXD69_001886"
     CDS             7931..9049
                     /gene="rnd"
                     /locus_tag="PXD69_001886"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HDL6284058.1"
                     /translation="MESLIHYQWVETNEQLEAVCEQARKTKVVALDTEFIRTRTYYPI
                     LGLIQLFDGQQVSLIDPNTISDFSPFVSLLADKNIIKVLHACSEDLEVFEYQFKQLPE
                     PMLDTQVMAAFAGIGISMGFAKLVSHYLNIELDKGASRTDWLARPLSAEQLQYAAADV
                     WYLLPVYEKLAQALTKSTWQSAVAEECVALLKKAKQPINKEKAYKNIANAWRLNREEL
                     AILQVLAKWRIEEAQKRNLALNFVVKEASLVQIAKSCPKHTSSLLEFMHPNEVRIHGK
                     KILWLVEQGKAIESNDYPELIQRLVDEKGYKYYMQAMLQKLLEIQPLDIVPELVASKR
                     QLNQLFKWYIDGKPSEKIPELLIGWRKPFGEQLLSVLS"
     gene            9106..9588
                     /gene="lrp"
                     /locus_tag="PXD69_001887"
     CDS             9106..9588
                     /gene="lrp"
                     /locus_tag="PXD69_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005695827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HDL6284059.1"
                     /translation="MENKKPPKALDAIDLKILNELQRNGKISNIELSKRVGLSPTPCL
                     ERVKRLEKNNVIMGYKALLNPELLDAPLLVIVEITLVRGKPDVFEEFNKAIQQLDEIQ
                     ECHLVSGDFDYLLKTRVADMVSYRKLLGTTLLRLPGVNDTRTYVVMEEVKQTNYLLLK
                     "
     gene            9599..12259
                     /locus_tag="PXD69_001888"
     CDS             9599..12259
                     /locus_tag="PXD69_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HDL6284060.1"
                     /translation="MIEQLKPHLKGKENLIKLMLLLTGFLGVYLLIAWASYSPLDNAW
                     SVASSITQTTLNKTGHFGAWSIDMLYAMFGKVAVLVPIALIIFSIYSLGMGLSVDMKW
                     KTVFIRLASFLLLMVGLAGLFSVLFSNSAYYLSGGFVGGVWETILSDTIGQFGALLIA
                     MLFTIAGLYFCSVQSLLPILTQFYEWIMAKSEESKTAESLQHLQNTEQKQPLVTENEA
                     VEVVDDHKPQFTDISAFKRPNISGLRHSENVEIDNREMYEIERDLELPTINILIQPDM
                     VNQVAEQATSGYELPNEESNVLQMPTIRLNTAIENEVDTIENSSSLEDLKIAESMLPQ
                     IQLDNDIEDTEEAIDDVREITPEFMVTPPKAMKDVSEQPAYPKGYGDTLIHPLLQRKV
                     ITEKPTTPLPTLDLLDKAPIQSQQITEQEIRETSVRLEAELANFGVKATVEDVLVGPV
                     VTRYEIQPAAGVKASKITNLASDIARGLMFKAIRITEVIPNKPYMGIETPNKHRETVW
                     LRDVLDSDEFRNTTATLPMALGKDISGEPVVVDMAKMPHLLVAGQTGGGKSVGVNTMI
                     LSLLFKLTPEQVRFIMIDPKVVELSIYNDIPHLLTPVVTDMKKAANALRWAVEEMERR
                     YLLVSHLQVRNIEGYNAKIDQAAAMNLPIPDPTWRPGDSMDSLPPPLQKLSYIVLIVD
                     EFADLMMSAGKEVEEYIMRIAQKARAVGIHLILATQRPSTDVITGVIKANIPSRIAFT
                     VASQIDSRTILDSGGAEALLGRGDMLYSGAGSPDIIRIHGAFMKDEEVQRVADNWRAR
                     GKPNYLESIVESRSEEADGKNDGGTGDLDPLFDEVVEYITETGSVSISNIQRRFSLGF
                     NRAARIVDQMEAQGIVSEPLKGGKREVLAR"
     gene            12411..>13217
                     /locus_tag="PXD69_001889"
     CDS             12411..>13217
                     /locus_tag="PXD69_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HDL6284061.1"
                     /translation="MRLDDIKESKNVEDRRFNNVGRTKVGRGKGGILTFIIVLVGAYY
                     GVDLTGLMGGGVEYEEQTSALNESEEKQLRTLSAKVLTTTENIWTSYFQQNGLTYKEP
                     SLVLYRGAIQTACGTGQSAMGPFYCPVDQKVYLDLSFYDDMRKKLRASGDFAFSYVIA
                     HEVGHHVQNLLGITSKTQRAQMKASSKAEANQISVNVELQADCFAGVWGHQLAKANRL
                     EEGDVEEAFNAAQAVGDDRLQQQSRGYVVPDSFTHGSSAQRLAWFRKGLTT"
BASE COUNT         4210 a         2380 c         2822 g         3805 t
ORIGIN      
        1 aaaaaaaatt aaccaatatc ttggtagtaa ttatgtggtg aaatcgagtg tggggcatat
       61 tcgtgattta ccgaaaagtg gtagtgatga aaaaacggaa aaagcgaaac cgatttcaac
      121 caaagggctg accgctgccg aaaaagctaa aatcaaagca gaaaaagagc gtgttgcatt
      181 ggttaaacgt atgggtatcg acccctataa tggctggaaa gctaactatc agattttgcc
      241 ggataaagag aaagtggttt ccgagctaaa atcgttggca aagaaagcag atcatatcta
      301 tctggcaacc gacttggata gagaagggga ggcgattgcg tggcatttgc gtgaaatcat
      361 tggtggtgat gacagccgtt ttagccgagt ggtatttaat gaaatcacca aagatgcgat
      421 caaaaaggct tttgacgatc cgcaaccgct caatattgac cgtgtaaatt cccagcaaac
      481 ccgccgcttt ttagaccgtg tagtgggctt tatggtgtcg ccattattat ggaaaaaagt
      541 agctcgtggt ttatcggcag ggcgtgtgca atcggttgcc gtaaaattac tggttgagcg
      601 tgagcgtgaa atcaaggcgt tccaaagcga ggagttttgg actattcttg ccaatacgca
      661 aattaatcgt aaaaaattac cgcttgaatt aactacttat aaaggtaaaa aattctcggc
      721 aagcaatgag gctgaagcaa atgttgcagt gcgtgctttg gagcagagcg attttattgt
      781 ttctaatatt gaagccaaag aaaccagctc tcgagctgct gcaccattta ttacctcatc
      841 gttacaacgt gccgctagca ctcgtttagg ttttggggtt aaaaagacga tgatgttagc
      901 ccaacggtta tatgaagcgg gttacatcac ctatatgcgt actgattcaa ccaaccttag
      961 ccgtgaagca ttagcaatgg ctcgaggtta tattcaggat aatttcgggg cgaattattt
     1021 gccggaaaaa gcaaatgtgt atcgcagtaa agataatgcc caagaagctc acgaagccat
     1081 tcgcccgtcg gatgtgaatg tcaaaatggc ggatttaaaa ggaatggata aagatgccga
     1141 gcgtttatac gatttaattt ggcgtcgttt cttggcgtgt caaatgttgc ctgctcgtta
     1201 tgattctacc gcagtcacag tgtctgccgg agactatgaa ctcaaagcaa acgggcgtgt
     1261 actgcgtttt gacggctgga cgaaagtact gccggtgcaa ggcaaaaatc cggaagatca
     1321 ggaattaccg gcggttgaac tgcatcaaaa attaacgctt gatgaaattg tgccaagtca
     1381 gcattttact aaaccgcctg cacgttttaa tgaggcgtct ttggttgctg agttagaaga
     1441 gcgaaaaatt ggccgccctt caacctatgc ttcaattatt tcgacgattc aagaacgtgg
     1501 ctatgttcgc accgaaaaca agcgttttta tgtggaaaaa atcggtgaag tagtgacgga
     1561 tcgcctcaac gaatcattca aagatttaat gaattatgat ttcactgcca atatggaaga
     1621 ggtgctcgac caaattgcag aggggtctaa aaattggaaa gaagagttga atactttctt
     1681 taaacatttc tctgaagagt tgagccaagc agaattagat gaacttgaag gcggaatgaa
     1741 accaaacagc cttgtgccaa ccgatattga ttgcccgact tgtggacgaa aaatggcaat
     1801 tcgcaccgct tccacagggg tatttttagg ttgcaccggc tatgctttac cgccaaaaga
     1861 gcgttgcaaa acgacaatga atttaattcc agaggcggaa tttttcaatg tgttagattc
     1921 ggattctgaa accaaagccc taatggctcg caagcgttgc ccgaaatgcg attcggcaat
     1981 ggatagttat gtgattgatg ctgaacgtaa attacacgtt tgtggtaata atccaaattg
     2041 tgatggtcat attattgagc aaggttcctt caaaattaaa ggctatgacg gacctgtagt
     2101 ggaatgcgat aaatgcggtt cagatatgca cttaaaactg ggtcgtttcg gcaaatatat
     2161 gggctgcaca agctgcgata acacccgtaa aattctgaaa aacggggaag ttgctccgcc
     2221 aaaagaagat cctattgctt ttcctgaatt aaaatgtgaa aaagccgatg cctattttgt
     2281 attaagagac ggagcaagtg gggtgtttat gtcagctcat aacttcccga aagtgcgtga
     2341 aagccgtgca ccaaaagtgg tagagttagc tcaatatcgt gaacgtttgc cggagaaatt
     2401 gcagtatctt gccgatgctc cgcagcaaga tccggaagga aacgaggcaa ttatccgttt
     2461 tagtcgtaaa gagaaacgcc aatatgtgac ttctgagaaa aacggcaaag ccaccaaatg
     2521 gattgttgat tatctagacg gtaaatgggt tgagcgtaag aaataaagct taaaagacaa
     2581 gcggtaaaat tttctaaaaa ttttaccgct tgcttttaga tgttctgagc gagtagttca
     2641 tcaattgctt tacttaattt attgcgatcg tgtcggtaat aaacgtcatt cgcagataag
     2701 ttttttcgca agatttgaat atgttcggga agttcagaac cggcatcatc agtcgtaatt
     2761 accgcattaa ttctagcctg tccgatacag ttctccatcc attcaattcg ctgattaagt
     2821 gatagttgcc cagctgggcc atgttcttgt ccgatattgt caataaatac tactcgggct
     2881 ttgctttgag caatagagtt tgctatgcct gccaccagca aattcggcat aatactggta
     2941 aaaaagctac ctgggcctag cagtattaac tcagcacttt gaatagctga aatggcttct
     3001 ggtgtagcaa caaccatagt atctaacgct aaatgttgtg gtgtttctgc taaagaatca
     3061 atttgcactt caccaaatac tgattcgcct gaatgcaact gtgcaattaa atgcaccggt
     3121 atttcagaca ttgggataag ttgcgatctt acgtgcaata attctcgcac caaattaatc
     3181 ccttctagcg gtcggatttg catattttca agggcggtga gaattaaatt gcctagatta
     3241 tgtccagcga gttcgcctgt gccagcaaaa cgatactcaa acaaccgaga agctatcgtt
     3301 ggtttaacga taatttgatt taaacagttg cgtaaatctc cccaagcaat caccccttgt
     3361 tgtgaacgta ttctaccggt tgagcctcca ttatcggtag tggcaacaat gccggtaagc
     3421 cgttccttta aaaaagagag cgcggagagc aatcgaccta agccgtggcc cccacctagt
     3481 gcaacaactg cattgagttg gtttaaatag tgatgtcggg taggtttaaa aggaataata
     3541 tctgtatttt ccatcttggg atttcgttta tttttctaaa ataatggcat ctgactgggc
     3601 tgaaggcaat gcttgtaata cagctttaac caaagtcgct aaaggaatcg caaaaaacac
     3661 tccccaaaag ccccataaac caccaaagat gagtacggca ataataattg tcagagggtg
     3721 tagatttact gcttcagaaa ataaaaaggg tacgagtaaa tttccgtcta gcaactgact
     3781 aataataaat gcgagcatta aatagtagaa atccggcgat aacccgaact ggaatagagc
     3841 aattaacatt accggaatgc tgactaaaac cgcaccgatg tagggaacta acactgaaat
     3901 ccctaccgct acagaaagta gtaacggata gcgtaaatca aaaaagagga aaataatata
     3961 agtgacaacc ccaacaatta gaatttctaa aaatttacct cgaatatagt tggcaatttg
     4021 ttgttgcatt tcaaaccata ctcgtgttgc aagtcgacgg ttttgcggta atactttact
     4081 aaaagaacgc attaaaacga ttttatcttt cagtaagaaa aagaccatga gtgggactaa
     4141 gaaggtgtaa atgcctaagc caactaagct gatgatagag ttaatcgaga gtgttagaag
     4201 tgattctccc atactcaaaa tattactttt agcggtattc acaatggaat ctagggtcgc
     4261 ataatctact aattcagggt aatgctccgg tagggcttgt aaccaagcat tgagcagatt
     4321 aaacatcgaa ggtaaatctt gaataaaggt aactgcttga ttccaaaggc tgggtagtag
     4381 tactacgcct aaaaaagata ataaagcgat gaaacctcct agtactagaa tgacactcaa
     4441 agttcgaggt aatttgagtt tgctcgacaa aaaacggatt ggccattcca ataaataggc
     4501 aaacacaagt gcaaccagaa ggggcataag cagatcgcta aaaaaataga taataccgaa
     4561 accgatcaat agaatactaa acagcacaac tatttgcggg tcggtaaatt tttttcgata
     4621 ccaatcttgc aacatttgaa acatatggat tgcctttaaa ttatgcgatg aaaattattt
     4681 ctggctacag actgcaatga accctagctt tttgtccggg tcattaaata gtttgtacat
     4741 tttattaaag gtttcgcgat tttctggttt taatgcattg ccgataattt tcatggcgcc
     4801 taaaacacct tcatcatgaa tcagaccttt aggggaaagt agagacattt ctccggaaaa
     4861 ggtatcaaca ttacggaaac cacaacgttg gaataatgat ttccagtctg ctttagcaag
     4921 tggagagaca gtgatattga ttgcatcacg caactcggct aataaagtat cggagtcttt
     4981 atcttggata acaatatcgt gcgttaataa aaagccattt ggttttaata cacgaaaata
     5041 ttcacgtatt gccttttctt tcgcttctag aggaagcatt gtcagcatgg cttcattaat
     5101 tacaatatca aaactttcgt cgtcaaatgg cagttttgtt gcgttggcgc gctgtacttg
     5161 aattaaatgc tcaacatggt tttctttgat atttttacgt gctttttcaa gcgcatcttc
     5221 gtctaaatca ataccaacaa tttggcattc aaattgttga gctaattgga ttgcagtagt
     5281 ccccatgtta caggcaactt cgagcacttt tttattttta tcaaaatccc cgtttgcaat
     5341 taaccaatca gttgctaatt tccccccggg gcgtaaacga gttttgccta aacgagctaa
     5401 aaaatgatga ccaacttctt cttttttcat aaaaacctct ggatttgcaa aatacgttaa
     5461 atatatgacc gcttgtattg tgatctatgt tcgttattat actcaatttt ttcattttct
     5521 tatatacaac atcaacagat tttgccagaa tacaacctca ttttgatatg aggaaaatag
     5581 aatgagtaag caaaagaatg attacctcca ccagcgaggt caaattaaag aaagtgcagt
     5641 aaaagcatta gtgactgatc cactttttag acaacgtgta gaaagaaatc gtaaagggaa
     5701 agggagctat cgcagacaag aaaaacacaa aaaaactatc tatgggcaaa aagaaacccc
     5761 atttaaaaat attcggttag agtcttttta aatggggttt tatttgtagc ttattgtagt
     5821 tttataagcc tgataaacac tatggtttac tgaaataggc caacaacggt tctggatttt
     5881 gaatataaga agaaagttct ttatgctctg ggtgacccat atagggaatt tgcccaagta
     5941 aaggcgcatt aattttttgt gtcagtagtt caattaattc gtgataatgc cgtagccctg
     6001 gatttactct gtttgcgacc caacttacta attttacacc acgctgcaaa atttcattcg
     6061 cagtaagtag tgcatggtta acacaacctt ccttaattcc caccactaaa acaaccggca
     6121 tattgttttg cattacccaa tcagcaaaat agtaatcctt gttaatagga gttagccagc
     6181 cataggttcc ttctacgaca acatttggat aggcattttc tagtcgtttt aaatctgtgt
     6241 ttaatttttc cagttgaata tgatgaactg catctaaagc tgcaaataca ggggtactgg
     6301 aatgaataaa agtatagcta ttaatatcac gatagctaac attagttgga cagctatcta
     6361 gtatggttaa tacgtctgaa ttatcttcag tagcataatc atattgagta ggttctgtgg
     6421 gtaatgaatc atcaccgcca caagcaatgg gtttatagcc aattacagga aaactatgtt
     6481 ttgtaagtgt ctgtatgatg gctcgggtaa ccacagtttt ccctacgttg gtgtctgttc
     6541 cggtaataaa taatgagggc ataaatggct cctttcgaaa atatggctgg tagtttaacc
     6601 aaaaatagat caatttattc tgtctttgat caaatttccg tcataaattc cttgttttat
     6661 tgctgaacag gcaattaatg gactattcca atcgtattgg ctggtaacta aatcgatttt
     6721 taggtttgtt tgtaacaaat ttttatgcaa tttttctgaa atttgcgtaa ataacggctc
     6781 ttttattttg atcaatggcg agtttagcat aattttttca ctagaaaata tattaactaa
     6841 attcattaat gcataagcta aattatcggt aatatgcgat aaaatagcta atgcaagcgg
     6901 ttgattttca tcaatttttt gacaaagcca gctgattttc tgttcctgac tttttaaatt
     6961 attaggcaaa taacgatcaa tgagtctcac aatagctggg aacgtcacct gattgactaa
     7021 tttatagcga tgaatttcat ctagttcagg gaatatttca tcactgagat ggctaaatct
     7081 aggcataagc atattatcaa cattcatctt tgattgttta gacagtaaac taccactaag
     7141 caatacactt agattcacag tatcatctaa ttgtagaaaa atagcattat cttggttaat
     7201 taatgagcca accgtagatt ctgcaagcaa ccacagctga aaatgttcac ttaataaaat
     7261 aggacaatga aacagcggcg agagtttaga tgtaatgtta cagaatatat ttttgtttcc
     7321 caattgagta atactgtctt tttctgcatt aattttaccg atcacactaa tagatacagc
     7381 caggagctga ctagtattaa cacaatatag ttggcggaaa tttgtaataa agttaagaat
     7441 aaaatcattt agcctaggat aattttctgc tgagattgta taatcttgct tataaatttc
     7501 tgcaccattg agtttacaaa gtgaaatttc aattttatga gatgaaacag taacacaaag
     7561 tagttgccaa aaaaaattag aaacagctaa tccaacggag gggcgacctc tggataaagt
     7621 agtctgaacc gtacgttcta aaatgaagtg gttatctatt agtattttag tcagatttgt
     7681 tactgaagct ggggctaacc ccgatagttt agctaaatct gttcttgaaa tgagttcaaa
     7741 ttgctcaatt aaatggtata ttttacccaa atgaagggct ttgttgtcag aaaacattta
     7801 aaatccttat gttagaattt ttagatgaca attatttttt gatatgaaaa aaataacaat
     7861 ctttttttgt ttataatgag agacagatca cataattatt ttttacgttt aaatatttca
     7921 ggaaaagtat atggagtctt tgattcacta ccaatgggtt gaaacaaatg agcaattaga
     7981 ggccgtatgt gaacaggcca gaaaaacaaa agtagttgcc ttagatacag agtttatccg
     8041 tacacgtacc tattatccga tattgggttt aattcaactc tttgatggcc aacaggttag
     8101 ccttattgat ccaaatacga tttctgactt ctcgcctttt gtgtcattat tagccgataa
     8161 aaatatcata aaagtattac atgcctgtag tgaggattta gaagtttttg agtatcaatt
     8221 taagcaattg ccagagccga tgttggatac tcaggtgatg gcagcctttg ccggcattgg
     8281 tatttcgatg gggtttgcaa aattggtttc ccactactta aatattgaac tagacaaagg
     8341 cgcttcccga accgattggc ttgccagacc gctaagcgct gaacaattac aatatgcggc
     8401 agctgatgtt tggtatttat tgccagttta tgagaaattg gcacaagcat taacaaaaag
     8461 cacttggcaa agtgctgtag cagaggagtg tgtcgctttg ttgaagaaag cgaaacagcc
     8521 tatcaataag gaaaaagcct ataaaaatat tgccaatgct tggcgattga atcgggaaga
     8581 gttagccata ttacaagtat tagcgaaatg gcggattgaa gaagcacaaa agcgcaatct
     8641 tgccttaaat tttgtcgtga aggaggcaag tttagttcaa atcgcaaaaa gctgtcctaa
     8701 acacacttct tcgctgttag aatttatgca cccaaatgaa gtcagaattc acggaaaaaa
     8761 aatactatgg ttggttgagc aaggaaaagc aatagaatcg aatgattatc ctgaactcat
     8821 tcagcgcttg gtggatgaaa agggttataa atattatatg caagcgatgt tgcaaaaatt
     8881 attagaaatt caaccgcttg atatcgtacc ggagttggtt gcaagtaaac gtcaattaaa
     8941 tcagctattt aaatggtata ttgatggaaa accatcagaa aaaattcctg aattattaat
     9001 cggttggcga aaaccttttg gtgaacagct gctatcggtt ttatcttaaa tttcattcgg
     9061 gttacataga ctatgtacag tataattgcc taaaaaggag tttatatgga aaataaaaaa
     9121 ccaccaaaag cattagatgc gattgattta aaaatcttaa acgagctaca acgtaacggg
     9181 aaaatttcta atattgaatt atcaaagcga gttgggcttt ctccaacgcc ctgcttagaa
     9241 cgggtaaaac ggctagaaaa aaataacgta attatgggct ataaagcttt acttaaccct
     9301 gaattacttg atgccccttt actggtgatt gttgaaatta ctttggtgcg tggtaagcct
     9361 gatgtatttg aagaatttaa taaagcgatt caacaacttg atgaaattca agaatgccac
     9421 ctggtatcgg gggattttga ttatctgtta aaaacccgtg tggcggatat ggtatcgtac
     9481 cgtaagttat taggcacaac attgcttcgt ttgcccggcg taaatgacac tcgaacctat
     9541 gtggtgatgg aagaagtaaa acaaaccaac tatttgttgt taaagtaagg agaattgggt
     9601 gattgaacaa cttaaaccac acctaaaagg caaagagaac ttgatcaaac ttatgctttt
     9661 gttgaccggc tttttgggcg tttatttgct aattgcttgg gcaagttata gtccattaga
     9721 taatgcttgg tctgttgcaa gcagcattac acaaacaacc ttgaataaaa caggtcactt
     9781 tggtgcttgg agtattgata tgctctatgc aatgtttggt aaggttgcag ttttagtacc
     9841 tattgcatta attattttct caatttatag cttgggaatg ggtttaagtg tcgatatgaa
     9901 atggaaaact gtcttcattc gcctagccag tttcttatta ttgatggtcg gtcttgccgg
     9961 gttatttagc gtgctttttt caaactcagc ttattatctg tcgggtggct ttgtcggtgg
    10021 agtttgggag acaatattat ctgatactat cggacaattt ggtgccttat tgattgcaat
    10081 gctttttact atagctggct tatatttttg ctctgttcaa tcattattgc caatattaac
    10141 gcaattttat gagtggataa tggcaaaatc agaagagagc aaaacagctg aatctcttca
    10201 gcatttgcaa aatactgagc aaaaacaacc gcttgtaact gaaaatgaag cggtggaagt
    10261 tgtagatgac cataaaccgc aatttaccga tatctccgcc tttaaacgcc caaacattag
    10321 tggtttaaga cactcggaaa atgtagagat agataaccga gaaatgtatg aaattgaaag
    10381 agatcttgag ctaccgacta ttaatatttt aatacagcct gatatggtta accaagttgc
    10441 ggaacaagct acatcgggct atgagttacc aaacgaagaa tccaatgtat tgcaaatgcc
    10501 gaccattcgc ttaaataccg ctatcgaaaa cgaggtggat acaatcgaaa acagttcatc
    10561 attggaagac ctgaaaatag cagaatctat gttacctcaa attcagcttg ataatgatat
    10621 tgaagatact gaagaagcta ttgacgatgt gcgtgaaatt acaccggaat ttatggtaac
    10681 gccgcccaag gcgatgaaag atgtgtctga gcagccagcc tatccaaaag gctatggtga
    10741 tacgttaatt cacccgttgt tacaacgaaa agtgataacc gaaaaaccga caacaccatt
    10801 gccaacgcta gatttgttgg ataaagcacc gattcaaagc cagcaaatta ccgaacagga
    10861 aatacgagaa acctctgtgc ggctagaagc agaattagca aactttggcg taaaagctac
    10921 cgttgaagat gtattggtcg gtccggtagt gacccgttat gaaatccaac cggctgccgg
    10981 ggtaaaagcc tccaaaatta ccaatttagc gagcgatata gctcgtggct taatgtttaa
    11041 agcgattagg attactgaag ttatcccaaa caaaccttat atgggtattg aaactccgaa
    11101 taaacaccgt gaaacagtgt ggttgcgtga tgtgctagac agcgatgaat tccgcaatac
    11161 cactgcaaca ttgccaatgg cactaggtaa agacatcagt ggtgagcctg tggtggtcga
    11221 tatggcgaaa atgccacact tactggtggc agggcagacc ggtgggggta aatcggttgg
    11281 ggtgaatacg atgattttaa gtctattgtt caaacttaca ccagaacaag tccgctttat
    11341 tatgattgac cctaaagtgg tggagctttc catttataac gatattcctc acttattaac
    11401 gccggtagta accgatatga aaaaagccgc caacgcacta cgctgggcgg tggaggaaat
    11461 ggaacgccgt tatttgctgg taagccattt acaggtgcgt aatattgaag gctataatgc
    11521 gaaaatcgac caagcggcag cgatgaattt gccgattcca gatccaacgt ggcgaccggg
    11581 cgattcaatg gatagccttc cgcctccgct acaaaaatta agctatattg tgctgattgt
    11641 cgatgagttt gcggatttaa tgatgtctgc cggtaaagaa gtggaagagt acattatgcg
    11701 aattgctcaa aaagcccgag cggtgggaat tcacttaatt cttgctaccc aacgtccgtc
    11761 aaccgatgtg attaccggcg tgattaaagc caatattcca agccggattg cgtttacagt
    11821 agcgagccaa attgactcaa gaactatttt agattcaggt ggagcagagg cattattagg
    11881 gcgaggcgat atgctctatt caggagctgg cagcccggat attattcgga tacacggtgc
    11941 gtttatgaaa gacgaagaag tgcaacgcgt ggcggataat tggcgggcaa gaggaaaacc
    12001 aaactacttg gaaagcattg tggaatcccg ctcggaagag gctgatggca aaaacgatgg
    12061 cggaacgggc gatttagatc cgctatttga cgaggttgtt gaatatatca cggaaaccgg
    12121 ttcggtctct atcagtaata ttcaacgccg cttctcgctt ggttttaacc gtgcggctag
    12181 aattgtggat caaatggaag ctcaaggcat tgtttctgag ccacttaaag gtggcaaacg
    12241 agaagtgctg gcgaggtaaa acacatacaa gcggttagat ttctgtgaaa ttttgcaaat
    12301 tttgacaaaa atctaaccga ttgtatttat ctaatgctaa ataagcatag tataaggcta
    12361 gtctttgggc taaaattaac gcaattttta catcttttaa ggttgaatat atgcgattag
    12421 atgatattaa agaaagtaaa aatgttgaag acagaagatt caacaatgtg ggtagaacta
    12481 aggttggtag agggaaaggt ggaatattaa cctttattat cgtgcttgtt ggagcttatt
    12541 atggtgttga cttaacaggt ttaatgggcg gtggcgtaga atatgaggag cagacatcag
    12601 cattaaatga aagtgaagaa aaacagctaa gaaccttatc cgctaaagta ttaacgacca
    12661 cagaaaatat ttggacttcc tacttccagc aaaatggtct aacttataaa gagccgtctt
    12721 tggtgcttta ccgtggggca attcaaactg cctgtggcac cggtcaatct gcaatgggtc
    12781 ctttctattg ccctgtcgat caaaaggttt atttagattt atcattctat gatgatatgc
    12841 gtaaaaaatt aagagcatcg ggcgattttg ccttctctta cgtgattgca cacgaggttg
    12901 gccaccacgt ccaaaattta ttgggcataa caagcaaaac ccaacgggct caaatgaaag
    12961 cctcatctaa agccgaagca aaccaaattt cagtcaatgt agaattgcaa gctgactgtt
    13021 ttgccggcgt ttggggacac caactcgcaa aagccaaccg attagaggaa ggcgatgtgg
    13081 aagaagcctt taatgctgcc caagcagttg gagatgaccg attacagcaa caaagtcgtg
    13141 gctatgtcgt gccggatagc ttcacccacg gctcatctgc acagcgtttg gcttggttta
    13201 gaaaaggttt aaccaca
//
LOCUS       DANLXO010000078        12912 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.078, whole genome shotgun sequence.
ACCESSION   DANLXO010000078 DANLXO010000000
VERSION     DANLXO010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12912
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.078"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            1..954
                     /gene="trxB"
                     /locus_tag="PXD69_001890"
     CDS             1..954
                     /gene="trxB"
                     /locus_tag="PXD69_001890"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDL6284062.1"
                     /translation="MTTKHTKLLILGSGPAGYTAAVYAARANLNPVLVTGMQQGGQLT
                     TTDEIENWPGEFEQITGTELMNKMLKHAEKFETEIVFDHIHSVDLSKRPFTLNGDLYT
                     FTCDALIIATGASAKYLGLPSEEHFKGKGVSACATCDGFFYRNKPVAVVGGGNTAVEE
                     ALYLANLASEVHLIHRRDSFRAEKILLGRLQKRIEEGKIILHTDRTVDEVLGDNMGVT
                     GLRLKSTKEELSEEIKVDGFFVAIGHAPNTAMFEGQLELENGYIKVKSGLEGNATATS
                     VEGVFAAGDVMDHNYRQAITSAGTGCMAALDAERFLDAQEA"
     gene            964..1719
                     /gene="kdsB"
                     /locus_tag="PXD69_001891"
     CDS             964..1719
                     /gene="kdsB"
                     /locus_tag="PXD69_001891"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDL6284063.1"
                     /translation="MKFTVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQLAGASR
                     VIIATDHPEIEALAQSFGAEVCMTSEKHNSGTERLAEVIEKMQIADSEIIVNIQGDEP
                     LIPPVIVTQVAQNLDAYQVNMATLGVKLATREELFNPNAVKVVADKNGMALYFSRASI
                     PFARDSFPDCDDSFVAAQGYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALW
                     HGEKIHIEPAKEAPQVGVDTPEDLERVRAILAR"
     gene            1797..2216
                     /locus_tag="PXD69_001892"
     CDS             1797..2216
                     /locus_tag="PXD69_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HDL6284064.1"
                     /translation="MLGNILGSLASSVLSGNNQSTATQLIQNLLASQGGIEGLIAKFQ
                     QGGLDDVLRTWISSDEDNAPVSGEQISNVFGQENIQNVAQEAGVDAADASDLLAQFLP
                     KIVDTLTPNGNVEDLKNFDANDLLAQAAKGILGNLFK"
     gene            complement(2270..3256)
                     /locus_tag="PXD69_001893"
     CDS             complement(2270..3256)
                     /locus_tag="PXD69_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDL6284065.1"
                     /translation="MSQLIRTLKGHIRDEIIKKGGWVNAHAHADRAFTMTPEKITVYQ
                     NANLQQKWDLVDEVKRNSSVEDYYRRFSQAIELMISQGVTAFGTFVDIDQVCEDRAII
                     AAHKAREVYKNDIILKFANQTLKGVIEPNAKKWFDIGSEMVDMIGGLPYRDELDYGKG
                     LEAMDILMDKAKSLGKMLHVHVDQFNSPKEKETEQLCDKSIEHGMQGRVVAIHGISIG
                     SHPKEYRKMLYQKMRDSQMMVIACPMAWIDSGRKEDLQPFHNALTPADELIPEGITVA
                     IGTDNICDYMVPLCEGDMWQELSLLSAGCRFTNLEEMANIASINGRKVLGLV"
     regulatory      3540..3683
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            3727..4680
                     /gene="thiB"
                     /locus_tag="PXD69_001894"
     CDS             3727..4680
                     /gene="thiB"
                     /locus_tag="PXD69_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HDL6284066.1"
                     /translation="MKFILSSLALLSASVYANQPTLTVYTYSSFASEYGPAPKLEQNF
                     EKECGCDVKFVPLDDSVTMFNRLRLEGAKTKADVVVGIDNFLQPEAEKSGLFAEFEAK
                     TKLETQQKIFFPYDTGSYAFIYDKEKLKNPPKSLKELVERQDLKVIYQDPRTSSVGRG
                     FLMWVNQVYGDEAPTAWKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYTTSPLYHKW
                     HENTDKYVAAPFEEGHLVQVENAAIVKSSQQKALANQFLEFLHKPESQHIISYHNVMN
                     PVLTDGVDPAFAAMPTYKTIEFTPPTTETIQKWLADWSKSW"
     gene            4930..5376
                     /gene="dksA"
                     /locus_tag="PXD69_001895"
     CDS             4930..5376
                     /gene="dksA"
                     /locus_tag="PXD69_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDL6284067.1"
                     /translation="MTQAAKTSLGLLALAGVEPYELKKDEEYMNEAQREHFTKILKAW
                     HSQIMEEAERTKSQLQEDMTNFADPNDRASQEEEFSLELRNRDRERKLLKKIEQTLYK
                     IQEDEYGYCETCGVEIGIKRLEARPTADLCIDCKTLAEIREKQLGL"
     gene            5621..6952
                     /gene="pcnB"
                     /locus_tag="PXD69_001896"
     CDS             5621..6952
                     /gene="pcnB"
                     /locus_tag="PXD69_001896"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HDL6284068.1"
                     /translation="MLHKKFAVNASQYRISPKDFPKNAISIVDKLQIAGYEAYIVGGC
                     IRDLLLEKKPKDFDIATNARPEEIQRIFGRQCRLIGRRFRLAHIVYGREIFEVATFRA
                     GHESHRNDKISKVSDEGMLLRDNVYGTLREDAERRDFTVNALYYDIKRNLIFDFFNGI
                     EDLRAGKLSLIGEPTIRYQEDPVRMLRAVRFMAKLDMFLDKATASPIRDMAVLLTNIP
                     AARLFDESLKLLQTGAGLKTYQLLREYELWQFLFPVLPAFFTAKGDSYAERMITKALN
                     STDERIADKLPVNPAFLFAALLWYPLREKMEQLKNEGGFNSYDAMMLAANDVLAESCN
                     AIALHRRHTSVIRDIWALQFQMMKRSGNRPQQTLEHVKFRAGFDLLVMRAEIEGGDLV
                     ELSAWWHEYQFSNEGQRTELLKSVRHLGNVPSEKKKTRRRRTFKKKPKVNG"
     gene            7155..7628
                     /gene="folK"
                     /locus_tag="PXD69_001897"
     CDS             7155..7628
                     /gene="folK"
                     /locus_tag="PXD69_001897"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDL6284069.1"
                     /translation="MQTVYIALGSNLENPLEQLKQAVEKLKKFANEFEISPFYGSKPV
                     GPQDQPDYVNAVAKFSTDLSPTALLDKLQSIENEQGRVRVRRWGERTLDLDIILYGNQ
                     QIQTERLNVPHIEMKNREFVIVPMFDLTPDLVLPTGEKLADIYAQFKDHQMIIFS"
     gene            complement(7625..7819)
                     /locus_tag="PXD69_001898"
     CDS             complement(7625..7819)
                     /locus_tag="PXD69_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HDL6284070.1"
                     /translation="MKPATFYFAIFLLNLTACTPKVQLETPSEGITINMNVVVDHRID
                     VKMDEKSRAVITKSENKTKN"
     gene            complement(7837..9612)
                     /locus_tag="PXD69_001899"
     CDS             complement(7837..9612)
                     /locus_tag="PXD69_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH domain-containing protein"
                     /protein_id="HDL6284071.1"
                     /translation="MPLKTAIRISLLSQNSWGKGNIVISNSDGEITEKGLNLPLRLTG
                     NIKHGNFILYSSVPLDFQGNFDDLSVKFLPSSLLRLTGKERYLTIEDLRFPLAGIKID
                     KHGIHGRLHAILRGQSPDFNNIEFHLDGQAQNFKAGALDFFQDPKDANAVKDSWKWRI
                     WGASILKAFNSKVNLSGRGQWHKQLVRLEELKGDLATVKLADTTISKITLNNTQAIRF
                     NVKKFTLDGAVMLQSPEIAFSYGGVLPKPRVNLAFDGEVEKLRFKGAVNTTELGPLKL
                     FARRQLSQDASQIIGKLYWPEQSAQGFQPLFPFRSQWVINNGTIRGETAFSAGSKNGL
                     IAGGHLAIRNGGLSLPNGEAKGIEFSLPYRYQNGRFHFGAKKPLDVKIAQIKLGDLAL
                     DNASMKLNGYYPYTKAKPLNLNQLSFDLFGGKLNVKRFALPQTELAYLNLERIDFEQI
                     LQFMQYQQIDLKGKANAILPFWLSGKPCYICDGLLTQAETSYLTFTPELLSEMQKSGY
                     TEQILLHLVDKSTINDFRSLINVGPKGDLVLDGKLKLSSNQNKSKVNLNYNHRENLFD
                     LWHLINYGSQFEQKLENYLYQKLER"
     gene            complement(9798..10544)
                     /locus_tag="PXD69_001900"
     CDS             complement(9798..10544)
                     /locus_tag="PXD69_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284072.1"
                     /translation="MKRALKFFGIATVLSVVAIYYFLMPSHYLATPINWILPKAWKVQ
                     LPQGLNLNWQGSSLAQFQLSYRDCPLLSADKTDLGWIEKNHLSVDKLDIDYRCLALFP
                     QNEHSNSDTSLNALLAVIPDGEATIHALNWKNLPTDFNPRLQRLFEQTAIKLSLSKGE
                     IQATAAQQAVKFAANFANGRLNADLSYQPNEKEQHNLRISAEIEDNFTQLPPTISAEY
                     DWQLSYEIIANKALQKGALFSVGKKMPHKS"
     gene            complement(10548..11363)
                     /locus_tag="PXD69_001901"
     CDS             complement(10548..11363)
                     /locus_tag="PXD69_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284073.1"
                     /translation="MAHDHDSPSKLEISTHAALPMVLMLFIEMALNFYSAPKNSIFIS
                     PYLLAFFVTSLISFLVLWKGEICRGQASRLSFILPFLLIFAVGNFLYSIGFTPKHNPM
                     AVASIAAVFACLIYFRLPEDQTLYNTLMYCGLAISSIGIIQYLAIYWFELPSLFNGIR
                     ANNFAQVLLGILLAGWYLMLAKSRLDVFLKLLVKTALVVLILNYCWTAFVLYQHLQIM
                     PDMPLLSFIIYFAAQFVILLMLAWLLLGKNIKNPTAWTVATLLAILYPFANVV"
     gene            11453..11860
                     /gene="gloA"
                     /locus_tag="PXD69_001902"
     CDS             11453..11860
                     /gene="gloA"
                     /locus_tag="PXD69_001902"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HDL6284074.1"
                     /translation="MRILHTMLRVGDLERSIKFYTDVLGMRLLRRSENEQYKYSLAFL
                     GYADESESAVIELTYNWGVDKYELGTAYGHIALGVDDIYKTIEDVRAAGGKITREPGP
                     VLGGTTVIAFAEDPDGYKIEFIENKDAKAALGN"
     gene            11945..12592
                     /gene="rnt"
                     /locus_tag="PXD69_001903"
     CDS             11945..12592
                     /gene="rnt"
                     /locus_tag="PXD69_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010130043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HDL6284075.1"
                     /translation="MEQTTEQIDYKLLKHRFRGYLPVVIDVETAGLNAQTDALLELAA
                     ITLKMDEQGYLVPDQQCHFHIAPFEGANINPESLKFNGIDIDNPLRGAVAENIAIPEM
                     FKMVRKAMKEQGCQRAVIVAHNAAFDQGFLQAAIKRINAKRDPFHPFAMFDTATLAGF
                     MYGQTVLVKACQVAKIPFDGKQAHSALYDTERTAELFCAMVNRLKDLGGFPPLSD"
BASE COUNT         3800 a         2506 c         2861 g         3745 t
ORIGIN      
        1 atgaccacta aacacaccaa acttttaatt ttaggctcag ggcctgccgg ttataccgct
       61 gctgtttatg ccgcccgtgc caatctaaac ccggttttag tcaccggtat gcaacaaggc
      121 ggacagctca ctacaaccga tgaaatcgag aactggccgg gggaatttga acaaattacc
      181 ggcacagagt taatgaacaa aatgctcaag cacgctgaaa aatttgaaac tgaaatcgtg
      241 tttgatcata ttcattcagt ggatttatct aaacgcccat tcacgctaaa cggagattta
      301 tacactttca cctgtgatgc gttaattatt gccaccggtg cgtcggcgaa atatttaggt
      361 ttgccttctg aagagcattt caaaggcaaa ggcgtgtcgg cttgtgcaac ttgtgatggt
      421 ttcttctatc gcaataaacc ggttgcggta gtcggtggtg ggaatactgc tgtggaagaa
      481 gcactttatt tggcaaattt ggcaagtgaa gtgcatttaa ttcaccgccg tgatagcttc
      541 cgtgctgaaa aaatcttgct tggtcgtctg caaaaacgta ttgaagaagg caaaattatt
      601 ctgcacacag accgtacggt tgatgaggtg ttaggcgata atatgggcgt taccggctta
      661 cgtttaaaat caaccaaaga agaattgagc gaagaaatta aggttgatgg tttctttgtg
      721 gcgattgggc acgcaccgaa tacggcaatg tttgaaggtc aattagaact tgaaaacggc
      781 tacattaaag tgaaatcagg tttggaaggc aatgctactg ccacttctgt ggaaggcgta
      841 tttgctgccg gtgatgtgat ggatcataac tatcgccaag cgattacctc tgccggcaca
      901 ggttgtatgg cagccctgga tgcagaacgt ttcttagatg ctcaagaagc ataaggatag
      961 cctatgaaat tcactgtaat tattcctgct cgttacgctt ccagccgttt gcctcgtaag
     1021 ccgttgttgg atattgcagg caaaccgatg attcaacacg tttgggaaaa agctcagctt
     1081 gccggtgcaa gccgtgtgat tattgccacc gatcaccctg aaattgaagc cctcgctcaa
     1141 tcttttgggg cggaagtctg tatgacttcg gaaaaacaca attccggcac tgagcgtttg
     1201 gcggaagtga tcgaaaaaat gcagattgcc gacagcgaaa ttattgtgaa tattcagggt
     1261 gatgaaccgc tgattccacc ggtaattgtt actcaggtag ctcaaaattt agatgcttat
     1321 caagtcaata tggcaacact cggtgtgaaa ttagcgaccc gagaagagct atttaaccca
     1381 aatgcggtga aagtggtggc agacaaaaac ggaatggcac tttatttttc ccgagccagc
     1441 attccgtttg ccagagacag ttttccggat tgtgatgaca gttttgttgc cgctcaaggt
     1501 tatttacgcc atatcggcat ttacgcttac cgagccggtt ttgtgaaaca atatgtggcg
     1561 tggcagccga cacaattaga acagcttgag tcccttgagc aactaagagc cttatggcac
     1621 ggtgaaaaaa ttcatatcga accggcgaaa gaagccccgc aagtgggggt ggatacgccg
     1681 gaagatttgg aaagagtgcg agccatttta gctcgttaaa gtgattacaa gcggtcgaag
     1741 tttgctgttt ttttgcaaaa ttttcgcaaa attgtaccgc ttgcatagga gaaattatgt
     1801 taggaaatat tttaggttca ttggcttctt cagtattgag tggcaataac caatcaactg
     1861 caactcaatt aattcaaaat ttactcgcct cacaaggtgg gattgaaggg ctgattgcca
     1921 aattccaaca aggcggatta gatgatgtgt tacgcacttg gatcagcagc gatgaagaca
     1981 atgcacctgt ttcgggcgaa caaatcagta atgtgttcgg gcaagaaaac attcaaaatg
     2041 tggctcaaga agcgggtgtt gatgctgctg atgcgagcga tttattagcc cagttcttgc
     2101 caaaaatcgt ggatacttta accccgaatg gtaatgttga agacttaaaa aactttgatg
     2161 caaatgactt attagctcaa gcggcaaaag ggattttggg taacttgttt aaataatcgg
     2221 ttatgctgtt attaaaggcg aacctagggt tcgcctttcg tttattcagt tagactaaac
     2281 ccagtacttt tcgaccattg atactggcaa tatttgccat ttcttctagg ttagtaaaac
     2341 gacagcctgc tgataaaagg ctgagttctt gccacatatc gccctcgcaa agcggtacca
     2401 tataatcaca gatattatct gtgccgatag caacagtaat gccttcagga atgagttcat
     2461 cagcaggggt taaagcgtta tggaacggtt gtaaatcttc cttacgtccg ctatcaatcc
     2521 acgccatcgg acaggcaatg accatcattt ggctatcacg cattttttgg taaagcattt
     2581 ttcgatattc tttcgggtgc gagccgatgg aaatcccgtg aatggcaacc actcgccctt
     2641 gcataccatg ctcaatcgat ttatcacaca gttgttcggt ctctttttct ttaggtgagt
     2701 taaattgatc aacgtggacg tggagcattt tgccgagcga tttggcttta tccattaaaa
     2761 tatccattgc ttccaagcct ttgccgtaat ccagttcgtc acggtaaggc aagccaccaa
     2821 tcatatccac catttccgag ccgatatcga accacttttt cgcattgggt tcaatcacgc
     2881 ctttcaacgt ttggttagca aatttcaaga tgatgtcgtt tttatatact tcacgggctt
     2941 tgtgagcggc aataatggct ctgtcttcac atacttggtc gatatccaca aaagtaccaa
     3001 atgccgttac cccttgtgaa atcatcaatt caatcgcttg ggaaaagcgg cggtagtaat
     3061 cttctacgct tgaattacgt tttacctcat cgaccaaatc ccatttttgc tgtagattcg
     3121 cattttggta aacggtgatt ttttcaggcg tcatcgtaaa tgcacgatct gcgtgggcgt
     3181 gtgcatttac ccaaccgcct tttttgatga tttcatcacg aatatgtcct tttagggtac
     3241 gaatcaattg gctcattttt attccttttc tctctgttaa tgtggctcaa ccgcttgcgg
     3301 taattgcaag cgtgcgaaaa aaaatcgcta taacagcgat tttgaatggt ttgaaatgaa
     3361 tagaaaaaca gctacgcctc taaagttgaa gcgtagctgt tgggaatttg atttaaccga
     3421 tgttgtgcaa ttcatttcta gttccttgtt tggactaggg cggtagtata cggattttta
     3481 atacaaatag caaacgtttg ctttggttga aatctgcctg caaacttttt acaatgaagc
     3541 cgttctcatt ggggtgcaac aagcggttgt ttttgcgtaa aaatttgcaa atttttgccg
     3601 aaatttaacc gcttgtggct gagaaatacc catagaacct gatctgatta atatcagcgt
     3661 agggatttga gatagcaact tgcctttctt aaatccttct attcatttaa tttagaagga
     3721 attgttatga aatttatcct ctcttcactt gcgttattaa gtgcaagtgt ttatgccaat
     3781 caaccgacct taaccgttta cacttacagc tcgtttgctt cggaatatgg acctgctcct
     3841 aaattagagc agaattttga gaaagagtgt ggctgtgatg tcaaatttgt tccgcttgac
     3901 gatagcgtaa cgatgttcaa ccgcttgcgt ttggagggag caaaaaccaa agctgatgtg
     3961 gtggtcggta ttgataattt cctgcaacct gaagccgaaa aaagtggctt gtttgccgag
     4021 tttgaagcaa agaccaaatt agaaacccaa cagaaaattt tcttccctta tgacacgggt
     4081 tcttatgctt ttatttacga taaagagaag ctgaaaaatc caccaaaaag tttaaaagag
     4141 ttggtggaac gccaagattt aaaagtgatt taccaagacc cacgtaccag cagcgttggg
     4201 cggggcttct taatgtgggt aaatcaagtg tatggcgatg aagctccaac tgcttggaaa
     4261 acattggcaa aacatacggt aacggtaggc aaaggttggt ctgaaactta tggagcgttc
     4321 ttaaaaggcg agtcggattt ggtactaagc tatactacat cgcctttata tcataagtgg
     4381 cacgaaaaca ccgataaata tgtggctgct ccgtttgagg aagggcattt ggtgcaagta
     4441 gaaaatgcgg ctattgtcaa aagcagccaa caaaaagcat tggcaaatca atttcttgaa
     4501 tttttgcaca aaccggaatc gcaacatatt atttcttacc acaacgtaat gaatccggtt
     4561 ttaaccgacg gcgttgatcc ggcttttgcg gcaatgccaa cctataaaac cattgaattt
     4621 acgccaccga ctactgaaac tatccaaaaa tggttagccg attggtcaaa gagctggtaa
     4681 aaagtgtttg aaaaatagcc gaatggatgt tcggctattt ttttgtgcaa tcaaatcaat
     4741 ttgaatgcaa aatttttgca aattcatttg attaatgagt cgtttttgtg ttatttatag
     4801 ccgccattat ttaaaacccg aagatgttga ttttttcgta tagtgcggtt acaaggaagt
     4861 tagtctgtat tcgggcaata attttaacaa taaaacttcc aataaacagg gaacaaggag
     4921 taaatatcta tgactcaagc ggctaaaacc tcactcggtt tattagcatt agcaggcgtt
     4981 gagccttatg agcttaaaaa agacgaagaa tatatgaatg aagctcaacg tgagcatttc
     5041 accaaaattc tgaaagcgtg gcacagtcaa attatggaag aagcggagcg taccaaaagc
     5101 cagcttcaag aagatatgac taactttgcc gatccgaacg accgagccag tcaagaagaa
     5161 gagttcagtt tagagcttcg taaccgtgat cgtgaacgca aattattgaa aaaaattgag
     5221 caaaccttgt ataaaatcca agaagatgaa tatggttatt gcgaaacctg tggcgtagaa
     5281 attgggatta aacgtttaga agcacgccca acagctgatt tatgtattga ctgtaaaact
     5341 ttagctgaaa ttcgagaaaa gcagctaggc ttataatcaa ctttacaggg tgcctctttt
     5401 ttaagaggca tttactattt agaggtgtat tatttttaat tatattaaat cattattttc
     5461 caagcctaaa aagtcggctc agaaaaatga aaaggtagag agtgaaaaaa gagcggaaag
     5521 agaacccaaa acttcccgtt ctaaacgccc agccccgaac ttaacggacc aaaagactta
     5581 tagaggtggg aagaaacaac aagataatcc tccctcccat ttgttacaca agaaatttgc
     5641 ggtgaatgcc agccaatata gaattagccc gaaggatttt cctaaaaatg cgatttcgat
     5701 tgtcgataaa ttgcagattg ccggttatga agcttatatt gtgggtggct gtattcgaga
     5761 tctactcttg gagaaaaagc ctaaagattt cgatattgcg actaatgcga gacctgaaga
     5821 aattcagcgt atttttggta ggcaatgccg attaatcgga cgtcgtttcc gtttggcaca
     5881 cattgtttac gggcgtgaaa tttttgaagt ggcgactttc cgtgcaggac acgaatctca
     5941 tcgcaatgac aaaatttcta aagtcagcga tgaaggaatg ctactgcgtg ataatgttta
     6001 cggcacgctc cgtgaagatg cagagcgccg tgatttcacc gtaaacgcct tatattacga
     6061 tataaaacgc aatcttattt ttgatttctt caacggtatt gaagacttac gagcaggtaa
     6121 actttcgctt atcggagagc ctactattcg ttaccaagaa gatccggtga gaatgttgcg
     6181 agccgttcgt tttatggcga agttggatat gttcttggat aaagccacgg cctccccaat
     6241 tcgggatatg gcggtgttgt taaccaacat tccggcagcc cgtttgtttg acgaatcact
     6301 caaattatta caaaccggtg cagggctgaa aacttatcag cttttgcgtg aatatgaact
     6361 atggcaattc ttgtttccgg tattgccggc attttttact gccaaaggtg attcctatgc
     6421 cgaaagaatg attaccaaag cgttaaattc aactgatgag cgaattgccg ataaattacc
     6481 ggtaaatcct gcgtttttat ttgctgcact actttggtat ccgctccggg agaaaatgga
     6541 gcagcttaaa aacgaaggtg gcttcaacag ctacgatgca atgatgctgg cagcaaatga
     6601 tgtgctggcg gaaagttgca acgcgattgc gttgcaccgc agacacactt cagtcattcg
     6661 agatatttgg gcattgcaat ttcagatgat gaaacgaagt ggcaaccgac cgcaacaaac
     6721 ccttgaacac gtcaaattcc gtgcagggtt tgatttatta gtgatgcgtg cagaaattga
     6781 aggcggcgat ttggtcgaac tttccgcttg gtggcacgaa taccaattta gcaatgaagg
     6841 tcagcgtact gaattgctga aatcggttcg tcatttaggc aatgtgccta gcgagaaaaa
     6901 gaaaacacgc cgccgtagaa cctttaagaa aaaaccgaaa gtaaatggat aattaatata
     6961 tttccctctc cccttgtggg agagggagcg atttttcttc gttcagaaga aaaatcaggg
     7021 agaggggaaa tgtgtaaaaa atttaataaa agttaccgct tgtcccctct ctctgcttat
     7081 ttcgctgaac gctcataagc ggtctctctc ccacaagggg agagagttta ttgttatatt
     7141 tgtaagtata ttttatgcaa accgtctata tcgccttagg atcaaacctt gagaatccgc
     7201 ttgagcagct taaacaagcg gtcgaaaaat taaaaaaatt tgcaaatgag tttgaaatca
     7261 gcccgttcta cggctcaaag cctgtcggac cgcaagatca gcctgattat gtcaatgcgg
     7321 tagcaaaatt tagtaccgac ctatcgccca ctgcattgct ggataaattg caaagcattg
     7381 aaaatgagca gggaagagtg cgtgtacgcc gttgggggga gagaacttta gatctggata
     7441 ttattttgta cggcaatcag caaattcaaa ccgagcgttt gaacgtgccg catatcgaga
     7501 tgaaaaatcg ggaatttgtg attgtgccga tgtttgattt aacgcctgat ttagtactac
     7561 cgacagggga aaaattagcc gatatttatg cacaatttaa agatcatcaa atgattatct
     7621 tcagctaatt tttcgttttg ttctcacttt tggtgatcac cgctcgggat ttctcgtcca
     7681 tcttcacatc aatgcggtga tcaacgacca cattcatatt aatcgtaatg ccttcacttg
     7741 gcgtttcaag ctgtactttc ggcgtacaag cggtcaaatt cagtaaaaat attgcaaaat
     7801 aaaatgtggc cggtttcata tttattccat tctttatcat cgttccagtt tttgatagag
     7861 gtaattttct aatttttgtt caaattgtga gccatagtta attaagtgcc acaaatcaaa
     7921 cagattttct cggtgattat agtttaaatt cacttttgat ttattttgat tggaagataa
     7981 ttttaatttt ccgtctaata ctaaatcgcc tttcggcccg acattaatca gactgcgaaa
     8041 atcgttaatc gtgcttttat ctactaaatg taacaaaatt tgctcggtgt aaccactttt
     8101 ctgcatttct gacaacaatt caggggtaaa ggttaaatag gaagtttccg cctgtgtcag
     8161 taagccatcg caaatatagc aaggttttcc gcttaaccaa aacggcaaga tagcgttggc
     8221 tttgcctttg agatcaattt gctgatattg cataaattgc aaaatttgct caaagtcaat
     8281 ccgctctaaa ttcaggtaag ccagttcggt ttgtggtaag gcaaagcgtt ttacattcag
     8341 tttaccgcca aacaaatcaa aggataattg atttaaattc aatggcttag ctttggtata
     8401 agggtagtaa ccgttgagtt tcattgaagc gttatctaat gctaaatccc ccagtttgat
     8461 ttgggcaatt tttacatcaa gcggtttttt ggctccgaaa tgaaagcgtc cgttttggta
     8521 gcggtaggga agcgaaaatt caatcccttt tgcttcgcca ttaggtaaag ataaaccgcc
     8581 gttacgaatg gctaaatgcc caccggcaat cagcccgttt ttactgccgg cactaaacgc
     8641 cgtttcgccc cgaattgtac cgttgttgat cacccattgg ctacgaaacg gaaaaagcgg
     8701 ctggaagcct tgagcagatt gctccggcca ataaagtttg ccgataattt ggctggcatc
     8761 ttggcttaat tggcggcggg cgaacagttt gagtgggccg agttcggtgg tattcaccgc
     8821 tcctttaaaa cgtagttttt cgacttcacc atcaaaggcg agattcactc gtggtttggg
     8881 tagcacaccg ccataactga aggcaatctc aggtgattgc aacattaccg ctccgtcaag
     8941 ggtgaatttt ttgacattaa atcgaatagc ttgcgtattg ttaagcgtga ttttagaaat
     9001 ggttgtatct gctaacttta cggtggctaa atcgcctttg agttcttcca accgcacaag
     9061 ctgtttatgc cattgccctc tgccgcttaa attcacttta ctgttgaagg ctttgaggat
     9121 agatgctccc caaattcgcc atttccaact gtcttttact gcgttagcat ctttaggatc
     9181 ttggaaaaaa tctaaggctc cagccttaaa attttgtgct tgtccgtcta aatggaactc
     9241 gatattgtta aaatcagggc tttgccctct taaaattgcg tgcagtcgtc cgtgaatacc
     9301 gtgcttgtca attttaattc cggcaagtgg aaaacgtaaa tcttcaatgg ttaaataccg
     9361 ctcttttccg gtcaaacgaa gtagggagct aggcaaaaat tttacgctta aatcgtcaaa
     9421 attaccttga aaatccagtg gcacgctact gtaaagaata aaattgccgt gtttgatatt
     9481 acccgtcaaa cgaagcggta aattcagccc tttttcggtt atttctccgt ctgaattgga
     9541 gattacaata ttgcctttac cccaactgtt ttgggaaagc aggctgatac gaatcgccgt
     9601 tttgagtggc aaaaagccgt tttggttgaa tgatttcggt gtgagcttgg tgctaacaaa
     9661 cccttgcagt ggaaattgtt gggtaaagtg ccaatcaaac cgcccttgtt gaatttctag
     9721 gctttcccca tcaaacagaa aagggaaatc cagtttgtta ttttcacttt cggcaagttc
     9781 aacctgccag ttgccttcta acttttgtgc ggcatttttt tgccaactga gaatagagcg
     9841 cccttttgca aggctttatt ggcgatgatt tcataagata attgccaatc atattcagcg
     9901 gaaatagtgg gcggcagttg ggtaaaattg tcctcaattt ctgctgaaat cctaagatta
     9961 tgctgttctt tttcattcgg ttgatatgat aaatcggcat tcaaccgccc atttgcaaaa
    10021 tttgctgcaa atttgaccgc ttgttgagcg gcagttgcct gaatttcacc ttttgaaagt
    10081 gagagtttaa tagctgtttg ctcaaaaagc cgctgaagtc ttgggttgaa atcggtaggc
    10141 aaatttttcc agttaagggc gtggatagtc gcttcgccat caggaatgac cgccagcaat
    10201 gcgttgagtg aagtgtcgga attgctgtgt tcattttgtg gaaacaaggc aaggcagcgg
    10261 taatcaatat ccaatttatc gacagaaaga tggtttttct caatccaacc caaatcggtt
    10321 ttatcggcac ttagtagcgg gcaatctcga taagagagtt gaaattgagc aagtgatgag
    10381 ccttgccaat tcaggtttaa gccttgtggg agttgaactt tccacgcttt cggcaaaatc
    10441 cagttaatcg gcgtggcaag atagtggctg ggcattaaaa aatagtagat tgccacaaca
    10501 gatagaacgg ttgcaatgcc gaaaaatttt aatgcccgtt tcataaatca gactacatta
    10561 gcgaaagggt ataaaatcgc taacagcgta gcaactgtcc aagcggtcgg atttttgatg
    10621 ttttttccaa gtaataacca cgccaacatc aataaaatca caaattgtgc tgcaaaatag
    10681 atgataaatg aaagcaatgg catatccggc ataatttgta gatgttgata aagcacaaaa
    10741 gctgtccagc aataattgag aatcagcacc acaagggcgg ttttcaccaa cagtttgagg
    10801 aaaacatcta aacggctttt cgctaacatt aaataccagc cggctaataa aatgcctaac
    10861 agcacttggg cgaaattgtt ggctcgaatc ccgttaaaca atgaaggcag ttcaaaccaa
    10921 taaatggcta aatattggat aataccaata cttgatatag ccaaaccaca atacatcaat
    10981 gtgttatata aggtttgatc ttccggcagg cggaagtaga ttaagcaggc aaaaactgca
    11041 gcaatgcttg ccaccgccat tgggttatgc tttggcgtaa agcctatgga ataaaggaaa
    11101 ttccctacgg cgaaaataag taaaaagggt aaaataaagc ttaaacggct ggcttgccct
    11161 cggcagattt cgcctttcca tagcactaaa aaactgatta atgaggtcac gaaaaacgcc
    11221 aataagtaag gagaaataaa aattgaattt ttcggtgcag agtagaagtt aagagccatt
    11281 tcaataaaca gcattaatac cattggcagt gcagcgtggg ttgaaatttc aagttttgac
    11341 ggcgaatcgt gatcgtgagc catagataat cccaaaaggt ataaagaaaa tgattttaag
    11401 ccaagattat gccataatag gggtcgtttt ttaacttcag ggggaagaaa atatgcgaat
    11461 tttacataca atgttacgag ttggagattt agagcgctca attaagtttt ataccgatgt
    11521 gttaggtatg cgtctgttac gtagaagcga gaacgagcag tataagtatt cgttagcatt
    11581 tttaggctat gccgatgaaa gcgaaagtgc ggtgattgag ctgacttata actggggtgt
    11641 ggataaatat gagctaggca cggcttatgg ccatattgcg ttaggcgtag atgatattta
    11701 caaaaccatt gaagatgtgc gtgcggcagg cggtaaaatt acccgtgagc cgggcccggt
    11761 attgggtgga acaactgtga ttgcctttgc tgaagatccg gacggttata aaatcgaatt
    11821 tattgagaat aaagatgcga aagcagcgtt aggaaactaa tttttgcgaa tatgaatatt
    11881 caagcggtcg gatttgtaaa aaattttgca aatcagaccg cttgtatttt aggttgatag
    11941 ataaatggaa cagacaacgg aacaaataga ttataaatta ttaaagcatc gttttcgtgg
    12001 ctatttaccg gttgtgattg atgtggaaac agcaggctta aatgcccaaa ctgatgcctt
    12061 attggaattg gcggcaatta ctttaaaaat ggacgagcaa ggttatctag tgccggatca
    12121 acaatgccat tttcatattg cgccatttga aggggcgaat attaaccctg agtcattaaa
    12181 attcaacggc attgatattg acaaccctct aagaggagcg gttgcggaga atattgcgat
    12241 tccggaaatg ttcaaaatgg ttcgcaaagc aatgaaggag caaggctgcc aacgggcggt
    12301 gattgttgcc cacaatgcag cgttcgatca gggcttttta caggctgcga ttaaacgaat
    12361 taatgccaag cgagatccct ttcacccttt cgcgatgttt gacaccgcca cccttgccgg
    12421 ttttatgtat gggcaaaccg tgttggtaaa agcctgccag gtggcaaaaa tcccgtttga
    12481 cggtaagcaa gcgcattctg cgttgtatga taccgagcgc acggcagaac ttttctgtgc
    12541 aatggtcaat cgtttaaaag atttaggtgg tttcccacca ttatcggatt aacgttattc
    12601 atttcattta ttaacacaat ttctcgtatt gtttctataa attatcctgg gagtgatgat
    12661 agttagtggc aagtaccatt ctgcaataaa tccagccctg tagagttgta gaaaaaataa
    12721 aaaactatct atcttcagtt aagattacaa gcggttggtt ttttaaccaa atttggcaaa
    12781 aatgtgacaa aatagaccgc ttgtattcaa taacaataga ctattttttg gctataagca
    12841 ctttctgtat acccgctatt tcgaccctcc ttatttttta tctaatctaa aaacaagcgt
    12901 ttccaccttg aa
//
LOCUS       DANLXO010000079        12761 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.079, whole genome shotgun sequence.
ACCESSION   DANLXO010000079 DANLXO010000000
VERSION     DANLXO010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12761
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.079"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..997
                     /locus_tag="PXD69_001904"
     CDS             <1..997
                     /locus_tag="PXD69_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="group II intron reverse transcriptase
                     domain-containing protein"
                     /protein_id="HDL6284076.1"
                     /translation="ILAFRKLNKSNIDFARIAFDSIRSAQNCTVLGLDISKFFDHIDH
                     KILKDMWCKVLGVPSLPEDHHSVFKAITKFVKVDRDTVFEFFNISLHNPRKNGKNRIC
                     SPREFREYRKLKKPDLFNDNPAFFINKGQKGIPQGSPISALLSNIYMLEFDVLVKEKI
                     MECKGSYFRYCDDILCIIPNEYEEFILDYITGEIKSKLKLEINKDKTEVVKFQYCNRT
                     KKIINEKKLQYLGFILHNNSISIRSSAFTRYSNKMKRGVSLAKQTQGKYNRIRIRRGV
                     AIKGIYKRKLFSKYSHFGKSNFISYGKRAYSSMDSKVIKNQLKPLWYRLKKEIYL"
     gene            complement(1249..2529)
                     /gene="hemL"
                     /locus_tag="PXD69_001905"
     CDS             complement(1249..2529)
                     /gene="hemL"
                     /locus_tag="PXD69_001905"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDL6284077.1"
                     /translation="MSISEQLFEQAQKVIPGGVNSPVRAFKGVGGTPVFIEKAEGAYI
                     TDSDGKQYIDYVGSWGPMVLGHNHPAIIDAVLKAVPKGLSFGAPTAAEITLAELVCKL
                     VPSIEMVRMVSSGTEATMSAIRLARGYTNRDKIIKFEGCYHGHSDSLLVKAGSGALTL
                     GQPSGPGVPADFAKHTLTCTYNDLDSVKAAFEQYPNEIACLIVEPVAGNMNCIPPQEG
                     FLQGLRDLCTQYGAVFIIDEVMTGFRVALGGAQSYYGVTPDLTTLGKIIGGGMPVGAF
                     GGKKEIMEYIAPTGPVYQAGTLSGNPIAMAAGLACLTELSKAGNETILAEKTKTLAEG
                     FKALADKHNVPLTVQYVGGMFGLFFTEQKAVNNFQEVMKCDAAKFNRFFHLMLEQGVY
                     LAPSAFEAGFMSLAHSDEDIARTLEAADKAFAQL"
     gene            2671..3735
                     /gene="wecA"
                     /locus_tag="PXD69_001906"
     CDS             2671..3735
                     /gene="wecA"
                     /locus_tag="PXD69_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HDL6284078.1"
                     /translation="MWLTFLTVFIVSFLALIVMRPVAEFVGLVDKPNFRKRHQGLIPL
                     IGGIALFIGNLTFYFMQWQDMRLPELYLTAVTILLIIGVLDDRFDISPLLRAGIQAAL
                     AGAMIYSGLSLSSLGQIIAPFSIELGWLGIVFTVFITIGVINAFNMVDGIDGLLAGLS
                     SVSFAGLGTLMFINGEPSLGYWCFALIFVLLPYAMFNLSLFGAKWKVFMGDSGSMLIG
                     FTIIWILLLSTQGQGSPISPITGLWLIAVPLIDMVAVIIRRLKKGKSPFKPDRLHLHH
                     LMMRAGLTSRQALLVITLWAGFCSTIGVLGEVYYWNQWVMMLMFIGLFFLYAYSITHA
                     WRVTRFVRRLKRRAKRSKQL"
     gene            3746..4558
                     /locus_tag="PXD69_001907"
                     /pseudo
     CDS             3746..4558
                     /locus_tag="PXD69_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248465.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LPS chain length-determining protein"
     gene            4599..5846
                     /gene="wecC"
                     /locus_tag="PXD69_001908"
     CDS             4599..5846
                     /gene="wecC"
                     /locus_tag="PXD69_001908"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL6284079.1"
                     /translation="MMSKTEFNTICILGLGYIGLPTSVVFANAGKQVIGVDINPQVVA
                     SLNQGNIHIIEPDLQTAFTQAVKKGNFFATAKPQPADAFIIAVPTPLCGKQPDLTYIQ
                     NAAAMIAPCLRKGNLVVLESTSPVGTTENLAEWLSQARPDLAFPADVSIAYCPERVLP
                     GNIMTELVENDRIIGGLSEQCSQQAVDLYQIFAKGRCVTTTARTAEMCKLVENSFRDV
                     NIAFANEISMICDALKINVWELIELANLHPRVNILQPGAGVGGHCLAVDPWFIVSTSP
                     QQARLIRTAREVNDSKPQWVIEQVKTSVADCAMEQDCKPSELTIACLGLAFKPNIDDL
                     RESPALAITRQLAAWHQGSLLAVEPNIQQLAGEKITLVDLNTALSQADILVLLVDHTS
                     FKQISREQIRQRHIIDCRGVWVR"
     gene            5843..6487
                     /gene="rffC"
                     /locus_tag="PXD69_001909"
                     /gene_synonym="wecD"
     CDS             5843..6487
                     /gene="rffC"
                     /locus_tag="PXD69_001909"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HDL6284080.1"
                     /translation="MKPDQWLSDFFGREIVQVKVAADDFRQIARLQKQGFVLVEGELE
                     FELALATFSENMTACRPADMADLPDLNLLFGSAFPDSRFRSPYFSREENQRFYRTWIE
                     NAVKGKFDDIGLVQCNADGQIQGAVTVRLLAQQQAKIGLLAVKPDCRQQGIGSELLNA
                     AIAWAKQQNAKKLMITTQLSNQKAIRFYQAFGASIKAVYYWFYPALEKYDDEQS"
     gene            6474..7617
                     /gene="rffA"
                     /locus_tag="PXD69_001910"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /pseudo
     CDS             6474..7617
                     /gene="rffA"
                     /locus_tag="PXD69_001910"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
     gene            complement(7661..9082)
                     /gene="glnA"
                     /locus_tag="PXD69_001911"
     CDS             complement(7661..9082)
                     /gene="glnA"
                     /locus_tag="PXD69_001911"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011298219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDL6284081.1"
                     /translation="MSNAIANVSKLIQDNDIKFVLLKFTDIKGKEHGVSLPVSLVAND
                     LEDLFEEGKMFDGSSVEGWKAINKADMLLMPIAETAVVDPFARIPTLSIRCSIYDPNT
                     MQSYDRDPRSIATRAENYLKSTGIADSVMFGPEPEFFLFDDVRFSTEMNNVSYRIDDV
                     EAAWNTNRKFEEGNKAYRPLKKGGYCAVAPIDTAHDIRSEMCLLMEEMGLVIEAHHHE
                     VATAGQNEIATRFNSLTLKADETQIYKYIVQNVAVEHGKTACFMPKPFAGDNGSGMHC
                     NMSLSKDGKNVFMGDKYAGLSETALYYIGGIIKHAKALNAFTNPTTNSYKRLVPGFEA
                     PVLLAYSASNRSASIRIPAVTSPKATRVEARFPDPMANPYLCFAALLMAGLDGVINKI
                     HPGDAMDKNLYDLPPEELKDIPTVASSLESALDALSNDFEFLTQGGVFTKDFIDAYIG
                     IRRKEVERVNMTPHPVEFELYYS"
     gene            9269..10339
                     /locus_tag="PXD69_001912"
     CDS             9269..10339
                     /locus_tag="PXD69_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HDL6284082.1"
                     /translation="MLPIYHILGSEIEHHNQQVLTFFQQELLPLLPDSEHFFYVVGKP
                     SLQTAFPHLRIKQFSSQKAIANALIAKKRQNPTACFLLHGQFNPWIWLAIALGRLPTT
                     NLIWHIWGADLYEMATSWKFKLFYPFRRVAQQKILQVWATRGDLDHLWRNMRTRSEQD
                     HLIYFPTKLGDQIKISPTQNDRLTILLGNSGDPANELIQALSEIHQRLGNNVRIIIPM
                     GYPENNESYIRQVEAYSKRLFLAENLQILRKKLSFEEYVTLLSHCDLGYFNFKRQQGI
                     GTISLLISHNVPCVLHSANPFGLDLQAEKVPYLLAENLTASQIQTTKQQLKSIDKNRI
                     AFFAPGYTKLWQQRLIELMQNE"
     gene            10332..11603
                     /locus_tag="PXD69_001913"
     CDS             10332..11603
                     /locus_tag="PXD69_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WzyE family oligosaccharide polymerase"
                     /protein_id="HDL6284083.1"
                     /translation="MNNLIPLGGFYLVSVGLFFSLLYQLYQKSGISFHLLFSLLYFVT
                     FYAGFPFSLIMAFGFDYPLPELKTQWQVFTAAGVGYLIYYVVYSRLWSAVSQPTALVA
                     NFQAKTTACILAAVAVVALLYFLYLNGFLLFKLEKYSQLFAKDRVILSALKRFFYFLL
                     PALLIFCFLYKNKTAWWALLIVGGAFGILSYVAVGGTWANLALAVGFFLLIGLQQGYL
                     SLSKVIAVSLIGVVAMFFLALARYKLTLSGSEMIYTFLYLSRDTFSPWENLARVFSNE
                     VEYQGLMPIVRDFYVYIPQSLWQERPEIVWNTANYFTKVILGNQSGLAISPTLLGSFY
                     IMGGFSVMALGMGIVAAMIKALDNLFAYAKACNSALLQAYCFGNLFNLIVLVREGIDA
                     FVSRFCFFTLIFMACYLLAKILSMGKNNNVR"
     gene            11593..12315
                     /gene="rffM"
                     /locus_tag="PXD69_001914"
     CDS             11593..12315
                     /gene="rffM"
                     /locus_tag="PXD69_001914"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HDL6284084.1"
                     /translation="MFDKVIIRGIALQAVKNREIFANWLMNEKRIQFGRLVAINAEKV
                     ILSEKNPLLRRVIDEAEFNYADGISVVQSIRKKYPNYKIERIAGADLWETLMQRAGAL
                     NVPVFLVGSSADTLTKVEAKLAQWKVNIVGRQNGYFKAEQEQDVIEQIKASGAKFISV
                     AMGTPKQELFIQQLQQQYPQALYMGVGGTYDVFAGKVKRAPKIWQNLGLEWLYRLLKQ
                     PTRWQRQLNLLKYAYYYLTNQL"
     gene            12474..12550
                     /locus_tag="PXD69_001915"
     tRNA            12474..12550
                     /locus_tag="PXD69_001915"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12508..12510,aa:Arg,seq:ccg)
     gene            12580..12655
                     /locus_tag="PXD69_001916"
     tRNA            12580..12655
                     /locus_tag="PXD69_001916"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12613..12615,aa:His,seq:gtg)
     gene            12680..12756
                     /locus_tag="PXD69_001917"
     tRNA            12680..12756
                     /locus_tag="PXD69_001917"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12714..12716,aa:Pro,seq:tgg)
BASE COUNT         3521 a         2518 c         2922 g         3800 t
ORIGIN      
        1 tatattagca tttagaaaac taaataaaag caatattgat tttgccagaa tcgcttttga
       61 tagtattcga agcgctcaaa attgcacggt tttagggcta gatatatcta agttctttga
      121 ccatatagac cataaaattc tgaaagatat gtggtgtaaa gttttgggtg tacctagttt
      181 acctgaagac catcattctg tatttaaggc tattactaaa ttcgtaaaag tagatagaga
      241 tactgtattt gaattcttta atatctccct tcataatcct aggaaaaatg ggaagaatag
      301 aatttgtagc cctcgggaat ttcgagaata taggaaatta aagaaacctg acttatttaa
      361 tgataatcca gcttttttta ttaataaagg ccagaaaggg attcctcaag gttctccaat
      421 aagtgcattg ttatccaata tctatatgtt agagtttgat gtgttagtta aagaaaagat
      481 tatggagtgc aaagggagtt attttcgtta ttgtgatgac attctatgta tcattcctaa
      541 tgaatacgaa gaatttattc tcgattacat cactggggag ataaaaagta aattaaaact
      601 agagataaat aaggataaaa ctgaggttgt taaattccaa tattgtaata gaacaaaaaa
      661 aataattaat gaaaagaagt tacaatatct tggttttata ttgcataata actctattag
      721 tattagatca tcggcattta cacgatattc aaataaaatg aaacgagggg ttagtctagc
      781 taagcaaact cagggtaaat ataataggat aagaataaga cgaggggtag ctatcaaagg
      841 catttataaa agaaagctat tttctaagta ttctcatttc ggaaaatcta attttatctc
      901 ttatggaaag agagcttatt catctatgga ttccaaagtt ataaagaacc aacttaaacc
      961 tttatggtat agattaaaga aagaaatata tttgtaatat tagaaagtgt aagacttgtc
     1021 cttgcctgca agtgttggaa gcccatatat tgctttatca atcctattcc ctcgatagcg
     1081 cccgtctcca gacgggtgct tgtttaagca taatgaaagt ttgtataagc actcgtcaga
     1141 gacgaacacc atcataattg ctatcgtaag agaaatttgc actacaagcg gtcaaattcc
     1201 ctcaaaaact tgcaaattat tgagtaaacc caaccgcttg tcattcttct aaagctgagc
     1261 aaatgcctta tccgcagcct ctagcgtacg agcaatatct tcatcactgt gagctaaaga
     1321 cataaaccct gcctcgaatg ccgatggggc taaatacacg ccttgttcca gcattaagtg
     1381 gaagaaacgg ttgaatttgg cggcatcaca tttcattact tcttggaagt tgtttactgc
     1441 tttttgttcg gtgaagaata agccgaacat tccgccgaca tattgtaccg ttaatggcac
     1501 attgtgctta tctgcaagag ctttaaagcc ttcagcgagg gttttggttt tttccgctaa
     1561 aatggtttca tttcctgctt ttgataattc agttaagcat gccaaacctg cagccattgc
     1621 aatcgggttg cctgagagcg tgccggcttg gtaaaccggg ccagttggag cgatgtattc
     1681 cataatctct tttttaccac caaatgcccc caccggcatt ccgccgccga taattttgcc
     1741 gagtgtggtt aaatccggtg ttaccccata gtaagattga gccccaccga gtgcgacacg
     1801 gaagccggtc attacttcat caataataaa taccgcacca tattgtgtgc aaagatcacg
     1861 taagccttgt aaaaagcctt cttgtggcgg aatgcagttc atattgccgg caacaggctc
     1921 aacaattaaa caagcgatct catttgggta ttgctcaaat gctgctttta ctgaatctaa
     1981 atcattatag gtgcaagtaa gcgtatgctt ggcgaaatca gcgggtacgc ccgggccgct
     2041 tggctgaccg agggttaaag cacctgaacc ggcttttact aacagagaat cggaatgccc
     2101 gtggtagcag ccttcaaatt tgatgatttt atctcggttg gtatagccac gagccaaacg
     2161 aatggcagac attgttgcct ctgttccgct gctcaccatt ctcaccattt caatagaagg
     2221 tactaatttg cacactaatt cggcaagtgt gatttctgct gccgttgggg caccgaaact
     2281 taagcctttt ggcacggctt ttagcaccgc atcaataatc gccgggtggt tatgcccgag
     2341 taccattggc ccccaagagc cgacatagtc gatatattgt ttgccgtcgc tgtcggtaat
     2401 ataagcacct tcggcttttt caataaaaac cggtgtgccg cccacgcctt taaatgcacg
     2461 cacaggggag ttcacaccgc ccggaatcac tttttgggct tgttcaaaca gttgttctga
     2521 aatagacata tcaattcctt tcttttgatg taaaaatttg cctgttattg tactgaaaag
     2581 cccttgtttt cgctaaaaaa tttacgattt tgttgcctta tgctattctg cattcctatt
     2641 ttatgactca ttttttgagg caatccctgt atgtggctta cttttttaac cgtatttatt
     2701 gtttcttttt tagccctgat tgtgatgcgt ccggtggcgg aatttgttgg tttggtagat
     2761 aagcccaact tccgtaaacg ccatcagggg ttgattccgt taatcggtgg tattgcatta
     2821 tttatcggca atctcacttt ctattttatg cagtggcaag atatgcggct gccggaactg
     2881 tatctgacag cggtaactat tttgctgatt atcggcgtgt tagatgaccg atttgacatc
     2941 agcccattac tgcgtgccgg gattcaagca gcactagctg gggcgatgat ttacagtggc
     3001 ttgtcgctca gcagtttagg gcaaattatt gcccccttta gtatagaatt aggttggctc
     3061 ggcattgtct ttaccgtgtt tatcaccatt ggcgttatta atgcgtttaa tatggtagat
     3121 gggattgatg gcttattagc agggctttcc agcgtgagtt ttgccggtct tggcacttta
     3181 atgttcatta atggcgaacc aagtttgggc tattggtgct ttgcccttat ctttgtgttg
     3241 ttgccgtatg caatgttcaa tttgagcctg tttggggcga aatggaaagt gtttatgggc
     3301 gactcaggca gtatgctgat cggctttacc attatttgga ttctgctgtt aagcacccaa
     3361 gggcaaggct cgccaattag cccgattacc ggtttgtggc tgattgccgt gccgttaatt
     3421 gatatggttg cggtgattat ccgccgtttg aaaaaaggta aaagtccgtt caaaccagac
     3481 cgcttgcacc tacaccattt aatgatgcga gcagggctta cctctcgcca agcattattg
     3541 gtgattaccc tctgggcggg attttgttcc accattgggg tattaggcga ggtgtattat
     3601 tggaatcagt gggtgatgat gctaatgttt atcgggctgt ttttcctata cgcctattcc
     3661 attacccacg cttggcgtgt aacccgtttt gttcgccgtc taaaacgccg tgcaaaacgt
     3721 agcaaacaac tttaaaggat atgttgtgaa aaccttattt tatcgacttt tagtgctaat
     3781 tttatttgct gctatcgggg caggtgccgg ttatgggctg agttatactc aacctgaaaa
     3841 atggaaagtg accgctcaat ttgagcaacc gactattccc gatttaggta attattactc
     3901 gttactttcc acctaccatt ttttgaatag taatagccaa gaagcgaata gccaaacggc
     3961 acagcaacag gcaagtgagc aggtttatgc ggaatttaaa cgcaacctca cgtccgccga
     4021 cttgcttcaa gcctatttgc tacaaacaga agcggtgaaa ttaaaagctc aggttgcaaa
     4081 gaaatcaccg gcggtggtgg cggctgaatt agttgaacaa ttccgttttg aaaaagatat
     4141 ggcaacttcg gcagataatg tcagcttaat tgcagaaaat gcggaagagg ctcaaaaatt
     4201 attagccgat tttattccgt tggtaaacac ctaagctcga gataaattaa acgccgattt
     4261 aattgcgaaa tggaaagtct tgttccagca aattaaaact gcttcggagt tgaatattaa
     4321 cggtaagcaa ggctcacaag attgggcagc taaactgcaa atgatgcgtt ctgttcagcc
     4381 gttagacaac caacttacag cttatcgctt ggttaaatcg cctagcgttc cacttaaatc
     4441 agaatcgcct gatccgccta ttttggctga tgattggggc attaagtggc ttactgctgg
     4501 gctttatgct cagttttgcg gtgaaagcga aagctcaacc tgcggaactt taatctaaaa
     4561 tggcacacaa tttagtgtgc catttctctt tgtaactgat gatgagtaaa actgaattta
     4621 acactatttg tattctgggg ttaggctata tcggcttgcc gacctcagtc gtttttgcca
     4681 atgccggcaa gcaagtaatt ggggtggata ttaatccgca agtggtggca agccttaatc
     4741 aaggcaacat tcatattatc gagccggatt tacaaactgc cttcacacaa gcggtcaaaa
     4801 aaggtaattt ttttgcaact gccaaaccgc aaccggccga tgcttttatc atcgccgtgc
     4861 caaccccact ttgcgggaag cagcccgatc tcacttatat tcaaaatgcc gccgctatga
     4921 ttgccccttg tttgcgtaaa gggaatttgg tggtgctgga gtccacttcg cctgtcggta
     4981 caacagaaaa tttagccgaa tggctaagcc aagctcgccc tgatttagcc tttccagccg
     5041 atgtgtctat tgcctactgc cctgaacgtg ttttgccggg taatataatg acggaattgg
     5101 ttgaaaatga ccgcattatc ggcggattaa gcgaacaatg cagtcaacaa gcggtcgatt
     5161 tataccaaat ttttgcaaaa ggacgttgtg tcaccaccac agctcgcaca gcggagatgt
     5221 gcaagttggt ggaaaacagc tttcgtgatg tgaacattgc ctttgccaat gaaatttcaa
     5281 tgatttgtga tgcgttgaag atcaatgtgt gggagctaat tgaattggca aatcttcacc
     5341 cgagagtaaa tattctccag cccggagcag gggtgggcgg acattgtttg gcggttgacc
     5401 cgtggtttat cgtttccaca tcgccccaac aggctcgcct tattcgcacg gcacgagaag
     5461 tgaatgacag caaaccgcaa tgggtaatcg agcaagtgaa aacatcggtc gcagactgtg
     5521 cgatggagca agattgtaag ccaagtgagc taaccatcgc ttgtttaggg ctagctttca
     5581 agccgaatat tgatgatttg cgggaaagcc cggcattagc gattacccgg caacttgccg
     5641 cttggcatca gggtagcctg ttggcggttg agccaaatat tcaacagctg gctggcgaaa
     5701 aaatcacctt agtcgatctc aacaccgcac tttcgcaggc agacatttta gtcttgttag
     5761 tggatcacac ttcatttaag caaatttcaa gggaacagat caggcaacgg catattattg
     5821 attgtcgagg agtgtgggta agatgaagcc ggatcaatgg ctgtccgatt ttttcggtag
     5881 agaaattgtg caagtaaaag tagcggctga tgattttagg caaatcgcta ggttgcaaaa
     5941 acaaggtttt gtacttgtgg agggagaatt ggaatttgag ctggcacttg caacattttc
     6001 tgaaaatatg accgcttgtc gcccggcgga tatggcagat ttgcccgact tgaacttatt
     6061 gtttggttcg gcatttcccg atagccggtt tcgttcgccc tatttttcaa gggaagagaa
     6121 tcaacgcttt taccggactt ggattgaaaa tgcggtaaaa ggcaagtttg atgatattgg
     6181 cttggttcaa tgcaatgctg acgggcaaat tcaaggggcg gtaacggttc gcttacttgc
     6241 ccaacagcaa gcgaaaatcg gattattggc ggtaaagcct gattgccgac aacaaggtat
     6301 tggctcggaa ttgttaaatg ctgcgatagc gtgggcgaaa cagcaaaatg cgaaaaaact
     6361 gatgattacc actcagctga gtaaccagaa agcgattcgt ttttatcaag cgtttggtgc
     6421 aagcattaag gcggtgtatt attggtttta ccctgctttg gaaaaatacg atgatgaaca
     6481 atcctgattt tattccgttt aatcaacccc cggttgtggg ggcggagcaa gcctatatag
     6541 aacaggcgat ggcaacaggg cagctttcgg gcggtggtaa attcacccgc ttatgtgagc
     6601 agtggcttga aaacctggcc cgtagcaaag tgttgcttac cccttcttgc acggctgcgt
     6661 tagagatggc ggcaatactg ctggatattc agccggacga tgaagtgatt atgccgagct
     6721 atacttttgt ctctactgca aatgcgtttg cgttgcgtgg ggcaaagatt gtgtttgtgg
     6781 atattcgtcc ggatacaatg aatattgatg aacgcaaaat tgagcaagcc attaccccaa
     6841 aaaccaaagt gattgtgccg gtgcattatg ccggcattgc ttgtgatatg gattcaataa
     6901 tggcaacagc cgaaaaatac gggctttatg tggtagaaga tgcggcacag gcagtcaatt
     6961 cgttttataa aggtagggcg ttaggttcca tcgggcatat tggttgctat agttttcacg
     7021 aaaccaaaaa ctataccgct ggcggtgaag gtggggcgat cgtgattaat gaggcatttg
     7081 ctggaaaaag cggaaatcat cagagagaaa ggcactaacc gtagccaatt ttttcgtggt
     7141 gaggtagata aatatcgctg gcaggatatt ggttcaagtt ttttaatgtc ggaaattcaa
     7201 gcggcttatt tgtatgctca gcttatagag gcagataaaa tcaaccaaca gcgtttaacc
     7261 ctttggcaca attactatca agcctttttg ccacttgccc aaacagctaa gtgcgagctt
     7321 cctcgcattg gcgaatattg tcgccataac gggcatttgt tctacttaaa gctaagtgac
     7381 ttgaagcaga gaactgcttt tattgatttt atgaaggcac agaatatctt aaccgtgttt
     7441 cattatgtgc cgttgcacag cagtccggca gggcagaaat taggtcgatt agcaggtgat
     7501 gatcgcttta ctaccttaga aagcgaacgg ttggtaagat tgccactgtt ttataatttg
     7561 agtaagcagg agcaagagcg tgttattcaa gcagtgcttg ctttcttcaa tcaataaaaa
     7621 acggctgagt gtttcagccg ttttttgcta tatgttgtta ctatgaatag taaagttcaa
     7681 attctaccgg gtgcggagtc atatttacac gttccacctc tttgcgacga ataccgatat
     7741 aagcatcaat aaagtctttc gtgaacacgc caccttgtgt taagaattca aaatcattgc
     7801 ttaatgcgtc aagagcggat tctaaagacg aggcaaccgt tggaatatct tttaactctt
     7861 ccggcggtaa atcgtataag tttttatcca ttgcatcgcc cgggtggatt ttgttgatca
     7921 caccgtctaa gccagccatt aacagggcgg caaagcaaag gtatgggttt gccattggat
     7981 ccgggaagcg tgcttctaca cgggtcgctt tcggactggt cacagccgga atacggatag
     8041 aggcagagcg gttacttgca gaatatgcca ataacaccgg tgcttcaaaa cccggcacta
     8101 aacgtttata agagttcgtg gttgggttag taaaggcatt taatgctttt gcgtgtttaa
     8161 tgataccgcc aatatagtag agggcagttt cagataagcc ggcgtattta tcgcccataa
     8221 acacattttt gccgtctttg cttaatgaca tattacagtg cattcccgag ccgttgtcgc
     8281 cggcgaacgg ttttggcata aagcaagcgg tttttccgtg ttctacggca acattttgca
     8341 cgatgtattt atagatttgg gtttcatcgg cttttaaggt caggctgttg aatcgggttg
     8401 cgatctcatt ttgtccggct gtcgcaactt cgtggtggtg agcttcaatc actaaaccca
     8461 tctcttccat caataaacac atttcggagc gaatatcgtg ggcggtatca atcggtgcaa
     8521 ccgcacagta gccgcctttt ttcaacggac gataggcttt gttgccttct tcaaatttac
     8581 ggttggtatt ccaagccgct tctacatcgt caattcggta tgacacattg ttcatttcgg
     8641 tgctaaaacg cacatcatcg aataagaaaa attcaggctc aggtccaaac attacgctat
     8701 cggcgatacc ggtggatttc aagtagtttt cggcacgggt tgcaatagag cgagggtcac
     8761 ggtcataaga ctgcattgtg tttgggtcgt aaatggaaca acgaatagaa agggtaggaa
     8821 tacgggcgaa agggtcaact acagcggttt cagcaatcgg cattaacaac atatctgctt
     8881 tgttaattgc cttccaacct tctacggacg aaccgtcgaa cattttgcct tcctcgaata
     8941 agtcttccaa atcgttggca actaagctga cagggagcga aaccccgtgt tctttacctt
     9001 taatatcagt aaattttaat aagacaaatt taatatcatt gtcttgaatc agtttagata
     9061 cattagcgat tgcgtttgac atagtaaaat aagtcctcgt tgggataaat gaataataaa
     9121 aaagctcggt tatcatagca ttttttaacc aagtgtgtga tgttttttag tgtttcaaag
     9181 ctaaaagaag ttgcagtaat gttgcaaatt tttgctaaaa tcttaccgct tgcatattgt
     9241 ttgtatggtg gggagagaaa agcgtgtaat gttgccgatt tatcatattc taggctccga
     9301 gattgagcat cataaccaac aggttttaac cttttttcag caagagcttt tgccgttatt
     9361 gccagactcc gaacattttt tttatgtggt aggcaagcct tcactgcaaa ctgcttttcc
     9421 tcatttgcgg attaagcagt tctcttcaca aaaagcgatt gcgaacgcct taattgcaaa
     9481 aaaacggcaa aatccgaccg cttgttttct gttacacggg cagtttaacc cttggatttg
     9541 gctggcgata gccttaggca gattgccgac caccaacctg atttggcata tttggggggc
     9601 ggatttatat gaaatggcaa cttcgtggaa atttaagctg ttttacccgt ttcggcgtgt
     9661 tgcccaacaa aaaatcttac aggtttgggc aacaagaggc gatctggatc atttgtggcg
     9721 aaatatgcgt acaagatcag aacaggatca tttaatctat ttccccacga aattaggtga
     9781 tcaaataaaa attagcccca cacaaaatga tcgcttgacg atattgctcg gcaattcagg
     9841 cgatccagcg aatgagctta ttcaagcctt aagcgagatt catcaacgac tagggaacaa
     9901 tgtgcggatt atcataccaa tgggctaccc ggaaaataat gaaagctata ttcggcaggt
     9961 ggaagcctat agcaagcggt tatttttggc ggaaaatttg caaattttgc ggaagaagct
    10021 gagctttgaa gagtatgtta cgttattgag ccattgtgat ctcggctatt tcaattttaa
    10081 acgccagcaa ggcattggca cgataagcct tttgattagc cataatgtac cttgtgtgtt
    10141 acattcagcc aatccgtttg ggttggatct acaggcagaa aaagtgcctt atttgttggc
    10201 ggaaaatctg actgcttcac agattcaaac aaccaaacaa caactaaaga gcatagataa
    10261 aaaccgcatt gcgttttttg ctccgggcta cactaaacta tggcaacagc gattaatcga
    10321 attaatgcaa aatgaataat ttaataccac ttggcggatt ttatcttgtt tctgtcgggc
    10381 tatttttcag cttactttat caactttatc agaaatcggg gatttctttc catttactgt
    10441 ttagtttgct ctattttgtt actttttacg ccggttttcc gttttcgtta ataatggcat
    10501 ttggctttga ttacccgctg ccggagctaa aaacacaatg gcaagttttt acggcagcag
    10561 gtgttggcta tttgatttat tacgttgtct attcacgctt gtggagtgct gtgtcgcaac
    10621 caactgctct tgttgcaaat tttcaggcaa aaacgaccgc ttgtatcctt gccgctgtgg
    10681 cagttgttgc cctgctatat ttcctttatt taaacggttt tctgcttttc aaactcgaaa
    10741 aatatagcca actgtttgcc aaagataggg tcatactttc ggcattaaaa cgatttttct
    10801 actttttatt gccggcgttg ttaatttttt gcttcctata taagaataaa acagcgtggt
    10861 gggcgttact gattgttggt ggggcattcg gcatattaag ctatgtggca gtgggcggca
    10921 catgggcaaa tttagcacta gcggttggct ttttcttatt gattggattg cagcaaggct
    10981 atctgtcgtt atcaaaggtg attgccgtaa gcctaatcgg cgtggtggcg atgttcttcc
    11041 tcgctctagc ccgttacaaa cttacccttt ccggtagcga gatgatttac accttcttat
    11101 atttaagccg agatactttt tcgccttggg aaaatttggc tcgtgtattt tctaatgagg
    11161 tggaatatca aggtttaatg ccgattgtgc gggatttcta tgtatatatc ccacaatctt
    11221 tatggcaaga acgccctgag atcgtctgga atacggcgaa ttattttacc aaagtgattt
    11281 taggcaacca atcagggtta gctatttcgc ctaccttact cggctctttc tatattatgg
    11341 gcggatttag cgttatggcg ttgggaatgg ggatagtagc tgccatgatt aaagccttag
    11401 ataacctatt cgcttacgcc aaagcgtgca attccgcctt gttgcaagcc tactgcttcg
    11461 gcaatttatt caatttgatc gtattagtgc gagagggaat cgatgcattt gtttcccgtt
    11521 tttgcttttt cacgctgata tttatggctt gctatttgct ggcgaaaatc ctttcaatgg
    11581 ggaaaaataa taatgttcga taaagtgatc attcggggca ttgcgttaca agcggtcaaa
    11641 aatcgggaaa tttttgcaaa ttggctgatg aatgaaaagc ggattcagtt cggaagatta
    11701 gtggcaatta atgctgagaa agtgattctg tcggaaaaaa atccgttgtt acgccgagtg
    11761 atagatgaag ccgagttcaa ctatgcagac ggcatcagtg ttgttcaatc gattcgaaaa
    11821 aaatatccaa actataaaat agagcgaatt gccggagccg atttatggga aaccttaatg
    11881 caaagagccg gagcgttaaa tgtgccggtg tttttggtcg gcagctcggc ggatacccta
    11941 acgaaggtgg aagcaaaatt ggcacaatgg aaggtgaata ttgtcggtag gcagaatggc
    12001 tattttaagg cggagcaaga acaggacgtt atagagcaaa ttaaagcaag tggcgcgaag
    12061 tttattagtg tggcaatggg aactccaaaa caggaacttt ttatccaaca gttacaacaa
    12121 caatatccac aagccttata tatgggtgtt ggcgggactt acgatgtgtt tgccggtaaa
    12181 gtgaaacgag cacctaaaat ttggcaaaat ttggggctgg aatggcttta tcgactattg
    12241 aaacagccaa cccgctggca aagacaatta aatttactaa aatatgccta ttactatctg
    12301 acaaatcagc tctaaaaaac gcattttttg atatttatta aacgttttga ataaaataaa
    12361 accaaacaat acattttttt acattttttt taaaaagtgc tagacaaggg aaagtgaaat
    12421 ctataatata cgcctccgtt gcgacgcatt aagttgaatt gatgtaaatc gaagcgttcg
    12481 tagctcagtt ggatagagcg ttggcctccg gagccaaagg tcgcaagttc gaatcttgtc
    12541 gagcgcgcca gatgtcaatg cggcactatc aacacaatgg tggctatagc tcagttggta
    12601 gagccctgga ttgtgattcc agttgtcgtg ggttcgaatc ccattagcca ccccattcaa
    12661 tactcttgtg agtatcagac ggcgagtagc gcagcttggt agcgcaactg gtttgggacc
    12721 agtgggtcgt aggttcaaat cctatctcgc cgaccaattt a
//
LOCUS       DANLXO010000080        12650 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.080, whole genome shotgun sequence.
ACCESSION   DANLXO010000080 DANLXO010000000
VERSION     DANLXO010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12650
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.080"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            184..402
                     /locus_tag="PXD69_001918"
                     /pseudo
     CDS             184..402
                     /locus_tag="PXD69_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014390712.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
     gene            complement(454..669)
                     /locus_tag="PXD69_001919"
     CDS             complement(454..669)
                     /locus_tag="PXD69_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284085.1"
                     /translation="MQTEKRGRGRPKSGLTLQELQAKSDAKRGVRLKSFKFHEDFIAQ
                     LEQLAEQHGISQTQVIVQAVEQFSKGA"
     gene            1214..1915
                     /locus_tag="PXD69_001920"
     CDS             1214..1915
                     /locus_tag="PXD69_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284086.1"
                     /translation="MSTQISTQTISFNNQALITFEQNGTHYTAMKPICENIGLTWHAQ
                     YERIKRDEILSQGILIIRIPTNGGDQQMICLPIEYLNGWLFGIDINRCKPEIRETLIK
                     YKKECYQALHDYWFKGKAERSQIAPIVEPKIPMELTKKEWLRFASMWYALYNSLEVLA
                     TLEKPLRAIGSPFGATAYTHATEYQTTLGVMKRILEPMLADFEVDPFEEAHYHKALTT
                     LRQYQPKGLGGLVRI"
     gene            2169..2345
                     /locus_tag="PXD69_001921"
     CDS             2169..2345
                     /locus_tag="PXD69_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284087.1"
                     /translation="MTEEDKEYLQTKIENEGFEYAFVSYSDFEEVQDEKFHGLRKAYL
                     KARSELAEYIDIED"
     gene            2433..2816
                     /locus_tag="PXD69_001922"
     CDS             2433..2816
                     /locus_tag="PXD69_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284088.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEEDQIRCPKTYAKL
                     REILEANEENVVRIGNVSISIGSTT"
     gene            2866..3087
                     /locus_tag="PXD69_001923"
     CDS             2866..3087
                     /locus_tag="PXD69_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL6284089.1"
                     /translation="MNIYTDFLSREEIEFITQCKQKNLIKKQLNIMGIPFKENANGFP
                     VVRRDYAQAKQRKPIATNDSDWVSNAFKA"
     gene            3109..4149
                     /locus_tag="PXD69_001924"
     CDS             3109..4149
                     /locus_tag="PXD69_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6284090.1"
                     /translation="MARPRKYENNGLPQNLLCRRRKRANGSIVEYYFYVLADGKERSL
                     GTNKHEAILEAAKLNFENSRKSPIVLFIDVAKRYELEVVPTKKAKNTRQSNLQAIHWL
                     CKFFGNPPAPLEKIEPKHISQYLQWRKDTPAVANIEVGLFNTIWNMAREWGYTALPSP
                     SQGVKKFPTKYREVYVEDYILDKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIY
                     DGILHITQQKTGKKVRFEISGRLKEILDKRLGYESDWIFTNKWGKKLKRRSLGDHFKE
                     IRERAMKAYPELADEIAKVQMRDMRAKAATDISLMTTDEQAQKQLGHTSKRMTHHYIR
                     KDKILKPTDEIT"
     gene            complement(4308..4595)
                     /gene="rplY"
                     /locus_tag="PXD69_001925"
     CDS             complement(4308..4595)
                     /gene="rplY"
                     /locus_tag="PXD69_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HDL6284091.1"
                     /translation="MSFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILD
                     HDKVNNAQVHDSFYNEVLTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRA"
     gene            complement(4747..6015)
                     /locus_tag="PXD69_001926"
     CDS             complement(4747..6015)
                     /locus_tag="PXD69_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HDL6284092.1"
                     /translation="MSDLKQQALDFHEFPIPGKISVTPTKALDTQHDLALAYSPGVAE
                     PCLAIEKDPSASYRYTARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAG
                     IDVFDIEINETDPEKLVEIIASLEPTFGGINLEDIKAPECFYVEQKLRERMGIPVFHD
                     DQHGTAIITGAAVINGLQVVGKAISEVRLVVNGAGASAIACTNLLRSLGVKKENITMC
                     DSKGVIFQGRGDKMDETKQFYAIEDNGWRTLADAVANADVFLGCSKGGALTQEMVKTM
                     AKDLLILALANPVPEITPAEAKAVRPDAIVCTGRSDFKNQVNNVLCFPFLFRGALDVG
                     AKTINEEMKMAAAHAIAELAKEPVPFEVISTYGELSFGPEYIIPTPFDPRLIVNVSIG
                     VAKAAIQSGVATRPITDWEAYAEQLKKLVA"
     gene            complement(6172..7083)
                     /locus_tag="PXD69_001927"
     CDS             complement(6172..7083)
                     /locus_tag="PXD69_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HDL6284093.1"
                     /translation="MKWLMLCREPRLYSCCRIKAACEAKGIELDILDQNRMLLGLENG
                     EFKIYYQAGESYDNNRPEPVLLPNYDGILPRFGTGSTEMGCSVLRHFEAKGIPVLNHS
                     AAFALARDKWRTLQKLAKHNLPVPNTNFAGHLVSVKSQLNQFAFPLISKVLNGSQGNG
                     VMLFEGKNNAEAVLATFRQVNEPYLCQQFVGDAKGQDIRAFVIGNEVVAAMSRTSVTG
                     DFRANIHQGGTAQPIELTQMERALAIKATKTIGLDIAGVDFLRTEKGVVILEVNASPG
                     FEGIERVNDVDIASEMVSYFINKMKNA"
     gene            complement(7080..7799)
                     /gene="nfsA"
                     /locus_tag="PXD69_001928"
     CDS             complement(7080..7799)
                     /gene="nfsA"
                     /locus_tag="PXD69_001928"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HDL6284094.1"
                     /translation="MQSKPTLETILSHRSIRKFTEQPISEEIFQILIEAGKAASSSNH
                     LQCVTVIRVTDRQIRETLKAVSGMQYVVDCAEFLVFCIDFNKHKQLVPESQLEWAEVS
                     LIGAVDTGILAQNVFLAAESLGLGAVYIGALRNDIERVSKALNLPEYCVPLVGMCLGY
                     PAQEPAIKPRLPNSLVCYNNQYQDFDWTEFAKYNENLTAYYQARIGEPQQWQAAIHKT
                     LDKPVRPHILPFFNQKGLLKK"
     gene            complement(7811..8596)
                     /gene="mtgA"
                     /locus_tag="PXD69_001929"
     CDS             complement(7811..8596)
                     /gene="mtgA"
                     /locus_tag="PXD69_001929"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HDL6284095.1"
                     /translation="MEQSMAKRNKRFLSSLLKKIGLFFIPRKIKSKLGWLWFGSSRLL
                     TFGGTFFLIPILIFSVLPVPYSAYMVQKKVENLVQGKSYPIKKEWVSLNEISWQMQMA
                     VIASEDQKFESHFGIDLQAIETALKLNAKSKKVRGGSTISQQTVKNMFLWHGQSWLRK
                     GIEVPLTLLVENVWSKDRILEVYLNIAEFGNGIFGVEAAAKHFFKKSAKQLTLQESAL
                     LAASLPNPLVFRVDKPGPSMRKRQAWIMRQVSLLDGKNYLDKL"
     gene            complement(8571..8891)
                     /gene="trpR"
                     /locus_tag="PXD69_001930"
     CDS             complement(8571..8891)
                     /gene="trpR"
                     /locus_tag="PXD69_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HDL6284096.1"
                     /translation="MKTLYNQRDPNEWTQFLALLEQAVAEDKLEPFFSMFLTADERGS
                     LGLRLQIVQALLKGEDSQREIQQNLNTSAATITRGSNMLKTLDQDFLQWLNGKVNGTV
                     NGKA"
     gene            complement(8971..9612)
                     /gene="lolA"
                     /locus_tag="PXD69_001931"
     CDS             complement(8971..9612)
                     /gene="lolA"
                     /locus_tag="PXD69_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDL6284097.1"
                     /translation="MKTLFKKSVFGLALFGLANVALADAQSVAELQRRLEQVSQYSAD
                     FDQTVRSSKGKQIQQGKGKFQVKRPNLFRMDTKSPQENLIVSDGKDLWFYDPFVSQVT
                     VNTVQDAVNNTPFVLLTSGDKSHWDQYDVSQSADTFVLKPKSKKSNLKQFDVRIDQSG
                     LLKGFSTIERDGQSNLYVLRNITTGGVSSDLFKFSVPKGAELDDQRGGKKSKK"
     gene            complement(9723..12581)
                     /gene="polA"
                     /locus_tag="PXD69_001932"
     CDS             complement(9723..12581)
                     /gene="polA"
                     /locus_tag="PXD69_001932"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDL6284098.1"
                     /translation="MATIAKNPLVLVDGSSYLYRAFHAFPPLTNRLGEPTGAMYGVLN
                     MLKSLISQVNPSHIAVVFDAKGKTFRDELFKQYKSHRPPMPDDLRPQIEPLHRIIKAL
                     GIPLISIEGVEADDVIGTLAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLL
                     DREGVIEKYGIPPELIIDFLALMGDSADNIPGVKGVGEKTALALLQGIGSLEQIYANL
                     DQIATLSFRGAKNFAPKLEAEKANADLSYLLATIKTDVELDVTHDQLLTQPQDRAELA
                     QLFEHYEFKRWLNEVNQNANPVTQTSAEKVPNNYQVTQAVRNEENVANVVEIDRSKYE
                     TVDTEQKLSAWIEKLTAARLIAVDTETDSLDAMSANLVGISFALENGEACYIPLGHKQ
                     KAQPQQADMFGDEERSESPSSDELVKNQLNLTACLSKLKPILLNPEIKKIGQNIKYDL
                     TIFANYGIELQGVAFDTMIESYTQNSTGRHNMDDLAARYLGHKTIPFEELAGKGKNQL
                     TFDKIEIAKAAEYAAEDADVTMKLHQVLWEKLQQEPELVKLFDEIEMPLVGVLSRIER
                     NGVLIDPKKLLTQSAEIEKRLEEVETLVHAEAGQTFNLASTKQLQEILFEKLGLPVLK
                     KTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSKLKSTYTDKLPQLINKKTGRVHT
                     SYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVAREGYKIVAADYSQIELRIMA
                     HLSNEEGMINAFAEGKDIHRATAAEIFGVELGEVTSEQRRSAKAINFGLIYGMSSFGL
                     SNQLGIGRAEAQKYMDLYFQRYPAVQQFMTDIREVAVEKGYVETLFGRRLYLPDIKSG
                     NAILRKAAERVAINAPMQGTAADIIKVAMIGIDNAIRDNDEIKMIMQVHDELVFEVKA
                     DKIDHYSQLIKTEMEKAISLKVPLIAEVGVGENWDEAH"
BASE COUNT         3784 a         2809 c         2377 g         3680 t
ORIGIN      
        1 ccttatattt ttttatgaga ttactacgaa agcgttttac tgtcagaaca aaaatttatt
       61 ttttcgatgc agatcgcaaa aatagatatt gaggcttgac accgccaaac ttcggattaa
      121 gataaccgca ctttcaagcc gtccaccaac ggcttttttt gtacctaaaa acggagaaac
      181 gaaatggcaa atagcgtaat gattgtacaa ggcgtggagg tcaaagtaac cgctcgtgat
      241 ggtgaggatt acatcagcct aactgatatg tgcaaagctt ttggagacag cgaccagctc
      301 attaaaaact ggcttcaaaa taaaaatacc attgaatttc ttcaagtttg ggaagagctg
      361 aataatccaa attttaattt ggtggaatta caccaaatta aatgcaacaa ctaattaaaa
      421 acatcgaaca gtgaagggta ggtttatagg ggcttacgcc ccttttgaaa actgctcaac
      481 cgcttgaacg attacctgtg tttgcgaaat gccgtgttgt tctgcaagct gttcaagttg
      541 agcaataaaa tcttcgtgga acttgaatga cttcaatcgc acaccacgct ttgcatcgct
      601 ttttgcttgt aattcttgaa gcgttaaacc tgatttaggg cgaccacgac ctcgtttctc
      661 tgtttgcatt gtcaattcct tgttgatttt taatacggaa cgttatatta tttaggaact
      721 gcctagcaga gatggcgttc tctgctagga cttttagctt tctaatctaa taagctggcg
      781 tgcttattaa gattaagatc actaggatta acaacttaag atacataatc cagttcctga
      841 tgtttgccgc tctcttcaag ggcggcttct tcattttcag accctttccg aaaacaagat
      901 tattttaata cataccaaat aaaacgcaag ctatttttta gtatttatta aaataatttt
      961 atttgacaac cgccaaactt taacttacta ttccgcccaa ggtgtcgaaa cctcatactc
     1021 taaggcggat agttcactaa tcgccactag gcgatttttt tatatccgta atcctgacta
     1081 tgtcgggagg gcgactaata caagaccgaa aggaaatacg tccagccctt accttagagt
     1141 gggttttcga acctcccgac gccactgtcg aaagtggctt gttttaaaca aatagactct
     1201 aaggattacg actatgtcaa ctcaaatttc tactcaaacc atttctttca acaaccaagc
     1261 cttaatcaca ttcgagcaaa acggcacaca ttacaccgca atgaaaccga tctgcgaaaa
     1321 tatcggcttg acttggcacg ctcaatacga acggatcaaa cgagatgaaa tcctttcgca
     1381 gggtattctt atcataagaa tacctacaaa cggtggcgat caacaaatga tctgcctccc
     1441 aattgaatac ctcaacggct ggctcttcgg cattgacatc aatcgctgca aacccgaaat
     1501 cagagaaacg ctcatcaaat acaaaaaaga gtgctaccaa gccctgcacg attactggtt
     1561 caagggcaaa gcggaacgtt cacaaatcgc cccgattgtc gaacctaaaa tcccaatgga
     1621 gctaaccaaa aaagaatggc tacgtttcgc ttcaatgtgg tacgccctct acaacagcct
     1681 tgaagtactt gctacgttag aaaaaccgtt gcgtgctatc ggttcgccgt ttggggcaac
     1741 cgcctacact cacgccaccg agtatcaaac cacgcttggc gtaatgaaac ggatacttga
     1801 accgatgtta gccgacttcg aggtcgatcc gtttgaagaa gctcactacc acaaagccct
     1861 aactacctta aggcaatacc agccgaaagg cttaggcggc ttagtccgaa tttaatttgc
     1921 aaaaaaatca cacaatccga ccgcttgtga aacatcaagc ggcggtttcc tgcacccaaa
     1981 attcaaggat taggcgatga aatacgcaaa aatcatactc tttttaaccg cctttgcagt
     2041 tgctgccgac tacttagagt tacacaacga ctgcgatggc aaaccatgca ctatcgcaca
     2101 gcgataatgc ttccccgacc ctgcccgtgc agtgtttatt tttatccact ctcaatagga
     2161 gaaacgaaat gacagaagaa gacaaagaat atcttcaaac taaaattgaa aacgaaggtt
     2221 ttgaatacgc tttcgtcagt tatagtgact ttgaagaagt ccaagatgaa aaattccacg
     2281 ggcttcgcaa ggcttattta aaagctcgaa gtgagttagc ggaatatatt gatattgaag
     2341 attaaccact gatgaactgt tcattgaaca aatgaacact tgacaaccaa ccgcttgtag
     2401 ctaactgcaa gcggttaatt tttggaggaa aaatgcacat agaagacaaa atcgcttggt
     2461 ggcttgccaa tggagagaca ggggtaagca gtaaaacaat ggctttttac cttggttacg
     2521 gaataagacc aaaaatagaa ggctacccac acgatgtatc ggatttcagg cgttgctttc
     2581 tgttgttgga gacagtccct tttttgcgaa ataggattga aaaaatggct gaacttggga
     2641 aagtttgggc tgcacttgca aaagaatggc acacattaga ggctctctac aacgaagagg
     2701 aagatcaaat aagatgcccc aaaacctatg ctaagttgag agaaatccta gaagccaacg
     2761 aagaaaatgt tgtccgcatc ggtaatgtga gcatttcgat aggttcaacg acttaacgat
     2821 tatttaacca aatccctcta aatgaggggt ttatttggag agaatatgaa catctacact
     2881 gacttccttt ctcgtgaaga gattgaattt attactcaat gcaagcagaa aaatctaatc
     2941 aaaaaacaac tcaacattat gggcattcca tttaaagaaa atgcaaatgg attccctgtt
     3001 gtccgccgtg attatgctca ggctaaacag cgtaaaccta ttgcaacgaa tgattctgac
     3061 tgggtatcaa atgcatttaa agcgtaaatt gagaagaagg aggcacttat ggcacgccct
     3121 cgaaaatatg aaaacaacgg attgccacaa aacctactct gccgccgcag aaaacgagca
     3181 aacggaagta tagttgaata ctacttttac gttcttgccg acggcaaaga aaggtctctc
     3241 ggtacaaaca aacacgaagc aattttagaa gcagccaagc taaattttga aaatagtaga
     3301 aaatccccaa ttgttttatt tattgatgtg gcaaaacgct atgaattgga agttgttcca
     3361 accaaaaaag ccaaaaacac tcgtcaatct aatttacagg ctattcattg gctatgtaaa
     3421 ttctttggta acccacctgc accgctcgaa aaaattgagc caaagcacat cagtcaatat
     3481 ttacaatgga gaaaagacac gccggctgtt gctaatattg aggtaggttt atttaacaca
     3541 atttggaata tggcaagaga atggggatac actgctcttc caagcccatc acaaggtgta
     3601 aaaaaattcc cgaccaaata tcgtgaagtt tatgtagagg attatatcct tgataaaatc
     3661 tatgaatttg cagatgaaag aatggcggat attatcgaaa cagcctattt gctgggacaa
     3721 agaccgattg atatttgtaa tatacaccgc tcacacatct atgacggtat attgcatatt
     3781 actcaacaga agacagggaa aaaagtgaga tttgaaatta gtggtcggct aaaagaaatt
     3841 ttagataaaa ggttgggata cgaatcagac tggattttta ccaataaatg ggggaaaaaa
     3901 ttaaaacggc gaagtttagg cgatcatttt aaagaaataa gggagagagc aatgaaagca
     3961 tatcctgaac ttgctgatga aatcgctaaa gtacaaatgc gtgatatgcg tgccaaagca
     4021 gccaccgata tttccctaat gacaaccgat gaacaagctc aaaaacaact tgggcataca
     4081 tcaaaaagaa tgacacatca ttacatcaga aaagacaaaa tcctcaaacc taccgatgaa
     4141 atcacctaaa aataaagccc ttttgccaaa tacaaaagag ccatttactc acctaaaatc
     4201 cgttccgaaa ctattttgta aataattgat tttattgacc taaaaaacta taaaatcgca
     4261 aaaagtttcg gaacagaaaa cagcgttaaa cccttgtaaa tcaaggatta agcacgtttg
     4321 aagtctaagt gaactaattt tggtttagtt gggtggcgtt gaattgcttg tacttttact
     4381 tgctcttctt tacctgcaac aacgatagtt aatacttcgt tatagaatga atcgtgaact
     4441 tgtgcgttgt tcactttatc gtgatctaaa atgattgata caggctctgc attaccaccg
     4501 tagatgattg caggaacttg accattgtga cgcaggcggc ggctcgcacc cttaccttgc
     4561 gcagaacgaa cttcagcttc aaatttgaat gacatagttt tattctctta aataaaatgg
     4621 ggaaatcccc gtgaatagaa aaaacagcag gcgacccagc tgtttccgaa aaaatatcgg
     4681 catatccgtc tcgatatgcc aactacgtat tttactgaag ttgcagaaaa atgcaatgta
     4741 aaaatattaa gcaaccagtt ttttcaactg ctctgcataa gcttcccaat ctgtaattgg
     4801 tcgagttgct acacctgatt gaattgctgc ttttgctaca ccaatcgaga cattcacgat
     4861 caaacgtgga tcaaatggcg ttggaataat atattccggg ccaaacgata attcgccata
     4921 agttgaaata acttcaaacg gcacaggttc tttagccaac tctgcaatcg catgggctgc
     4981 tgccattttc atttcttcat taatggtttt tgccccaaca tctaatgctc cacggaataa
     5041 gaacgggaaa caaagcacat tattcacttg gtttttaaag tctgaacgac cggtacatac
     5101 aatcgcatct ggacggacag ccttcgcttc agcaggtgta atttccggca cagggttcgc
     5161 taaagcaaga attaatagat cttttgccat tgttttaacc atttcttgcg ttaaagctcc
     5221 gccttttgaa caacctaaga aaacatctgc attcgcaacg gcatctgcca atgttctcca
     5281 accattatct tctattgcat agaattgttt ggtttcatcc atcttatcac cacgaccttg
     5341 gaaaataacg cccttagaat cgcacattgt gatattttct tttttcacac ctaatgaacg
     5401 gagtaagtta gtacacgcaa tcgctgatgc tccagcaccg tttaccacta aacgtacttc
     5461 tgaaattgct ttacctacca cttgtaatcc gttaatcacc gccgcaccgg taataattgc
     5521 cgtaccgtgt tgatcatcgt ggaacacagg gattcccata cgttcacgta atttttgctc
     5581 tacataaaaa cattcaggtg ctttaatatc ttccagatta ataccaccaa aagtcggttc
     5641 taacgatgca ataatctcca ctaatttctc cggatcagtt tcattaattt caatatcaaa
     5701 cacatcaatt ccggcaaatt tcttaaatag aacacctttg ccttccatca caggcttact
     5761 tgctaaagca ccaatattgc ctaagcctaa cactgctgta ccattagaaa ttactgcaac
     5821 taagttacct cgtgccgtat aacgataaga agctgaagga tctttttcaa tcgctaagca
     5881 aggctcagca accccaggag agtacgctaa agctaaatcg tgctgagtat ctaatgcttt
     5941 agtaggagta acggaaattt ttccggggat tgggaactcg tgaaaatcaa gcgcctgttg
     6001 ttttaaatcg ctcattttag aaaccttata atctataaaa ataaaagtaa tcaataatag
     6061 ccaaagagta gccattttac cctaaatttt ttcgcatttt tatggctttg ctctcatttt
     6121 ttatgatatt tacaaaaaat aatacaaaaa cgtccgcttg ttttactcaa atcaagcatt
     6181 cttcatctta ttgataaaat aagaaaccat ttcagaagct atatcaacat catttactct
     6241 ctctatgcct tcaaatcctg ggctggcatt gacttctaaa ataactacgc ctttctctgt
     6301 ccgcagaaaa tcaacgcctg caatatcaag ccctatcgtt ttagttgctt taattgctaa
     6361 cgcacgttcc atctgagtta attcaatcgg ttgagccgtt ccaccttgat gaatattggc
     6421 tctaaaatcg cctgttacgc tggttcggct catggcagca accacttcat tgccaatcac
     6481 aaacgcccga atatcttgcc ctttagcgtc gcccacaaat tgttggcata gataaggctc
     6541 atttacttgc ctaaaggtcg ctaacacggc ctcggcatta tttttgcctt caaatagcat
     6601 tacgccattc ccctgtgaac catttagcac ttttgaaata agtggaaaag caaattgatt
     6661 gagttgtgat ttcacagaaa ccaaatgccc tgcaaaattc gtattaggaa ccggcaaatt
     6721 gtgtttggct aatttttgta atgttcgcca tttgtctcgg gctaacgcaa atgccgctga
     6781 atgatttaga acaggaatac ctttcgcctc aaaatggcgt aacaccgaac agcccatttc
     6841 ggtactgcct gtgccaaaac ggggtaaaat gccgtcataa ttcggcaaca ataccggctc
     6901 cggacggttg ttatcatagc tctcgccagc ttgatagtag atcttaaatt cgccattttc
     6961 taacccgagt agcattctat tctggtctaa aatatccagc tcaatcccct ttgcctcaca
     7021 agcggctttt attcgacagc agctatataa acgaggctct cgacatagca ttagccactt
     7081 cattttttca gcaatccttt ctgattgaaa aacggcaaaa tatgcggacg aacaggctta
     7141 tccaatgttt tatgaatagc tgcttgccat tgttgtggct cgccgattct ggcttggtag
     7201 taagcggtca aattttcatt atattttgca aattcagtcc aatcaaaatc ctgatattga
     7261 ttgttataac aaaccaaact attcggcaaa cgaggtttta ttgccggctc ttgtgccgga
     7321 taccccaaac acatacccac cagtggaaca caatattccg gcaagttaag ggctttagaa
     7381 acccgctcaa tatcattacg caatgctcca atatacaccg ctcccagccc tagtgattcg
     7441 gcggctaaaa atacattctg ggccaaaata ccggtatcta ccgccccaat caacgacacc
     7501 tccgcccatt ccaactgcga ttcagggaca agttgtttgt gtttattaaa atcaatgcag
     7561 aacaccaaaa attcagcaca atctactaca tattgcatac ctgaaacggc ttttaatgtt
     7621 tctcgaatct gccgatcggt tacacgaatc accgtcacac attgcagatg atttgaactt
     7681 gaagccgctt tacctgcctc aattaagatt tggaaaatct cttcagaaat aggctgttcg
     7741 gtaaatttac gaatagaacg gtgagataaa atcgtctcaa gagtcggttt actttgcata
     7801 tttttctcgt ctaaagttta tctaaataat ttttgccatc aagcaaactt acttgtcgca
     7861 taatccacgc ttggcgtttt cgcatactcg ggccgggttt atctacccta aacaccaacg
     7921 ggttaggcaa agaggctgcc aatagtgcgg attcttgcaa ggttagctgt ttggctgatt
     7981 ttttgaaaaa atgctttgcg gctgcttcca ccccgaaaat gccgttacca aattccgcaa
     8041 tattgaggta cacctctaaa atccgatcct tactccacac attttcgact aacagggtta
     8101 aaggcacttc aatccctttg cgtaaccagc tttgcccgtg ccacaaaaac atatttttta
     8161 ccgtttgttg cgaaatggtt gaacctccac gcactttttt ggatttagca ttcagtttca
     8221 aggcagtttc tatcgcttgt aagtcaatgc caaaatggct ttcaaacttt tgatcttctg
     8281 aggcaatcac agccatttgc atttgccacg aaatctcatt caggctcacc cattcttttt
     8341 tgatcgggta agatttcccc tgaaccagat tctccacctt tttttgcacc atatacgcag
     8401 aataaggcac cggtaacacc gaaaaaatca gtatcggaat caggaaaaat gtgccaccaa
     8461 aggttaataa gcgactagaa ccaaaccaaa gccagcccag tttacttttt attttgcgag
     8521 gaataaaaaa aagccctatt ttcttcaaaa gagagcttaa aaatcgcttg ttacgctttg
     8581 ccattgactg ttccattaac cttgccgttc agccattgca gaaaatcttg gtcgagtgtt
     8641 ttaagcatat ttgaaccacg agtgatggtt gccgcactgg tatttaaatt ttgttggatt
     8701 tcccgttgcg aatcttcacc ttttagcaaa gcttgcacaa tttgtaaacg caagcctaat
     8761 gaacctcgct catcggcggt gagaaacatt gagaaaaacg gctcaagttt atcttccgca
     8821 accgcttgtt caagcagagc caaaaactgc gtccactcgt ttggatctcg ctggttatag
     8881 agtgttttca tactgtccct tgaagtaaaa acggtgacaa gcggtcagat ttttacaaaa
     8941 ttttgcagaa aaacgaccgc ttgctctcca ttattttttc gattttttac cgccacgttg
     9001 gtcgtctaac tctgcccctt tcggtacgct gaatttaaac aaatcgcttg agacaccgcc
     9061 ggtagtaata ttgcgtaaca catataagtt actttgcccg tcacgctcaa tggtactgaa
     9121 accttttaat aaaccgcttt ggtcaatccg cacatcaaac tgttttaaat tgcttttttt
     9181 cgattttggc ttaagcacga aagtatcagc actctggctg acatcatatt gatcccagtg
     9241 gcttttatca ccgctggtta ataagacgaa tggcgtatta ttaactgcat cttgcacggt
     9301 atttaccgta acttgtgaaa cgaaaggatc gtaaaaccat aaatctttgc cgtcagatac
     9361 aatcaaattt tcttgtggtg atttggtatc cattctaaat aagttcgggc gttttacttg
     9421 gaatttgcct ttgccttgct gaatttgttt acctttgcta gaacgcacgg tttggtcgaa
     9481 atccgcacta tattggctta cttgttccaa acggcgttgt aattctgcaa cagattgagc
     9541 atcagccaat gccacatttg ccaagccaaa taacgctaaa ccgaataccg attttttaaa
     9601 taatgttttc atttgttttc ctttttacca acaagaattt tcttgtttga caataaaatc
     9661 atcaaaagtt tcatattaat gaactgttac aacaatacaa taaaagtcgt gaattgtata
     9721 gtttaatgag cttcgtccca gttttcgcct acgccaactt cggcaatcag tggcactttg
     9781 aggctaatcg ctttttccat ttcggttttg attaattggc tgtaatggtc gattttatcg
     9841 gctttgactt caaacaccaa ttcatcgtga acctgcataa tcattttgat ttcatcatta
     9901 tcacgaatcg cattatcaat accaatcatc gccaccttaa taatatcggc agccgtgcct
     9961 tgcattgggg cgttgattgc cacccgttct gctgctttac gcaaaatagc attgccggat
    10021 ttaatatcag gcaagtacaa acggcgacca aatagggttt caacatagcc tttttcaact
    10081 gcaacttcac gaatatcggt cataaattgt tgaaccgccg ggtaacgttg gaagtagaga
    10141 tccatatatt tttgagcctc tgcacgccca atccctaatt ggtttgaaag cccaaatgac
    10201 gacattccgt aaatcagccc gaagttaatt gctttcgcac tgcggcgttg ttcggaggtg
    10261 acttcaccta actccacccc gaaaatttcg gcagcggtag cacggtgaat atctttgccc
    10321 tccgcaaagg cgttaatcat tccctcctca ttcgataaat gagccataat ccgtagctca
    10381 atttgtgaat agtcggcagc gacaatttta taaccttctc tcgcgacaaa agcttggcga
    10441 atccgtctgc cctcttcatt gcggatcgga atgttctgca aattcggatc gctggaagaa
    10501 aggcgtccgg ttgcggtgac tgcttgattg taagaggtat gcacccgccc tgtttttttg
    10561 ttaatcagtt gtggtaattt atcggtgtag gtagatttca acttacttaa cccacgatgc
    10621 tccattaata acttcggcac taaatgccct tgttgagcca actcgtctaa cacttcttcg
    10681 ttggttgagg gtgcaccttt tggagttttc ttcaacaccg gcaagcctaa tttttcaaac
    10741 aaaatctctt gtaattgttt agttgaggca agattgaagg tttgccctgc ttctgcgtgt
    10801 actaatgttt caacttcctc caaacgtttt tcaatttcag ccgattgggt caataatttt
    10861 ttcgggtcaa tcaacacgcc attgcgttca attcgagaaa gtacgcccac aagtggcatt
    10921 tcaatttcat cgaataactt caccaattca ggctcttgct gtagtttttc ccacaatact
    10981 tggtggagtt tcatcgtcac atcggcatct tctgccgcat attcagccgc ttttgctatc
    11041 tcgattttat cgaaggtcag ttgatttttc cccttaccag caagctcttc aaacggaatc
    11101 gttttatgcc ccaaataacg ggcggctaaa tcgtccatat tatgacgacc ggtgctgttt
    11161 tgggtgtaag attcaatcat cgtatcaaaa gcaacacctt gtagctcaat gccgtagttc
    11221 gcaaaaatgg ttaaatcata tttaatattc tgcccgatct ttttaatctc cgggttaagc
    11281 aaaatcggct tgagtttact taaacaagcg gtcaaattta gctgattttt taccaattca
    11341 tcggaagacg ggctttctga acgctcctca tcaccgaaca tatcggcttg ttgcggttgg
    11401 gctttttgct tatgcccaag cggaatatag cacgcctcgc cattttccag tgcaaaggaa
    11461 ataccgacca aattagccga cattgcgtca aggctgtcgg tttcggtatc caccgcaatc
    11521 aaacgagctg cggtgagttt ttcgatccag gctgataatt tctgttcagt atcaacggtc
    11581 tcatatttgc tacgatcgat ctcgaccaca tttgcaacat tttcctcatt tctgaccgct
    11641 tgtgttactt ggtaattatt cggtactttt tcagccgaag tttgagtgac cggattggca
    11701 ttttgattca cttcgttcag ccagcgttta aattcataat gctcaaataa ttgagcaagc
    11761 tcagcacggt cttgcggctg tgttaaaagt tgatcgtgag taacatcaag ttccacatcg
    11821 gttttgatgg tagcaagcaa ataggataaa tcggcattcg ctttttccgc ttccaatttt
    11881 ggggcgaaat tttttgcccc acggaaagaa agggtggcaa tttgatccaa attagcataa
    11941 atctgttcaa gtgaaccaat gccttgcaat aaagctaatg cggtcttttc ccccacacct
    12001 tttacgcccg gaatgttatc ggcggaatcg cccattaatg ccagaaagtc gataatcaac
    12061 tcaggcggaa tgccatattt ttcaatcacg ccttcacgat ctaacaaagt attgttcatc
    12121 gtgttaatca acataatgtg atcgttcacc aattgtgcca tatctttatc gccggtgctg
    12181 atcaacacat ctttgccgtc tttagcggct tgcacagcaa gcgtgccgat cacatcatca
    12241 gcttccacac cttcaatcga aatcagtgga atgcctaagg ctttgataat gcgatgcaaa
    12301 ggctcaattt gagggcgtaa atcatcgggc attggtgggc ggtgcgattt atattgctta
    12361 aacaactcat cacggaaggt tttccctttg gcatcaaaca ccacagcaat atggcttgga
    12421 ttcacttgtg aaatcaggct ttttaacata ttcagcacgc catacattgc ccctgtcggt
    12481 tcgcctaagc gattagtgag cggagggaaa gcgtgaaatg ctcgatataa ataggaagaa
    12541 ccatccacca ataccagtgg attttttgcg atagttgcca taaaaatctc tttataatca
    12601 aataaatatt ggcgttatta tacaagaata tttaagaatt gagtgtgtat
//
LOCUS       DANLXO010000081        12637 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.081, whole genome shotgun sequence.
ACCESSION   DANLXO010000081 DANLXO010000000
VERSION     DANLXO010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12637
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.081"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            1..170
                     /locus_tag="PXD69_001933"
                     /pseudo
     CDS             1..170
                     /locus_tag="PXD69_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            422..1612
                     /locus_tag="PXD69_001934"
     CDS             422..1612
                     /locus_tag="PXD69_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDL6284099.1"
                     /translation="MSTSQQLIQQTEHFGANNYLPLPIVISKAKGIWVEDPEGNRYLD
                     MLSAYSAVNQGHCHPKIVQALKDQADKVTLTSRAFYNDQLGIWYEKICKLANKEMALP
                     MNTGAEAVETAIKTARRWGYDVKGIAENQAEIIACVGNFHGRTMAAVSLSSDPDYKRG
                     FGPMLGGIKLVPYGDLEALKAAITPNTAAFLVEPIQGESGILIPPEGFLEQAYELCKE
                     NNVLFIADEIQAGLGRTGKLFATEWEGFEPDIYILGKALGGGVFPISCVLANRDILGV
                     FNPGSHGSTFGGNPLACAVSIASIDVLLEEKLAERSRELGEYFLAELKKIQNPIIKEV
                     RGRGLFIGLELHQPARPFCEKLKEKGLLCKETHDTVIRFAPPLVIEKFNLDWALEKIR
                     EVLA"
     gene            1687..3198
                     /gene="nhaC"
                     /locus_tag="PXD69_001935"
     CDS             1687..3198
                     /gene="nhaC"
                     /locus_tag="PXD69_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL6284100.1"
                     /translation="MLILQTFSKNQPLVKGGFMSNRTEITDQNIRIPFRYAILPVIIM
                     VSIMAVAIIKFEASPHVPLLIGAISAAVIAMAHGYRWETIEKGIYRGIRMALPAIVII
                     IMIGLTIGAWLGGGIVATMIYYGLKLISPSLFLVTISIICAIVTLAIGSSWSTMGTIG
                     VAAMGIGFSLGIPAPMVAGAVISGAYFGDKMSPLSDTTNLAAGITETNLFEHIRHMFI
                     TTVPAFLIALSVYFYFGMEFRAENLDLAKIEDIMQAMQEHFLISPWLLLVPLLVVVLV
                     AKKVPALPALAAGIILGWLCHVFVQGGDVSVAVITLHDGYKIESGHEMIDKLFNRGGI
                     ESMMYTISLTIVAMTFGGIAEQAGMLHSVVEKILTLAKSAGSLISATIVSAFITNVTT
                     SEQYISILLPGRMYIKAYRDKGLSSRNLSRALEDGGTVTSVLVPWNTCGVYAFSMLQV
                     SAFEYAPYAIMNWLIPLIAIGLATLNIKIERLPPEELAKEPEEITLPKRGCCP"
     gene            3315..6914
                     /gene="putA"
                     /locus_tag="PXD69_001936"
     CDS             3315..6914
                     /gene="putA"
                     /locus_tag="PXD69_001936"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HDL6284101.1"
                     /translation="MMSYQLLPNTTIRPELSRHYRFDEQTLVQNLIEQAHCDEQADNI
                     KKLTTQLVGKVRTARQKASGVDALMHEFSLSSQEGVALMCLAEALLRIPDTATADKLI
                     RDKIAKGDWRSHTGNSPSLFVNAAAWGLVITGKLVSTHSESSLSSALSRLIAKGGEPL
                     IRKGVDVAMRMLGKKFVTGETIQQAIKNGEKRFAMGYRYSYDMLGEAALTAEDAKRYY
                     NDYVASIHAVGATSKGLGVYKSSGVSVKLSAIHPRYSLSQHQRVMDELYPRLKELFLL
                     AKKYDIGLNIDAEEADRLELSLDLMDRLLADPDLAGFNGIGFVVQAYQKRCPYVIEHL
                     IETARKHNRQLMIRLVKGAYWDTEIKRAQMDGAEGYPVFSRKVHTDLNYIVCAKKLLA
                     AQDVIYPQFATHNAQTLATIYHLAQGKRFEFQCLHGMGESLYDQVVGSDNLNVQCRIY
                     APVGTYQTLLAYLVRRLLENGANSSFVSQIVDENLSVDDLAQAPVQKAELTNGTMHPK
                     IPLPVDLFDDNRVNSKGYDLTDAVSLQNLENALNELTKQHYRAEPQLANDNTSGQESR
                     KIYNPANQAELVGEVIDATENDMEQAFESAAAFQSEWANTSPAVRAECLEKMADLMEA
                     NMPQLFDLAVREAGKTLNNAIAEVREAVDFCRYYAKEVRNNIEAYKNPRGIVVAISPW
                     NFPLAIFVGEVSSALVAGNVVLAKPAEQTSLMAHYAVSLFYQAGVPKAALQCLPGRGK
                     TVGVALVADHRVNGVIFTGSTETAKNINRNLHKNEKIIPLIAETGGQNAMIVDSSALG
                     EQVVIDVLNSAFDSAGQRCSALRVLYLQRDVADHILTMLKGAMAELKVGLPQHLTTDV
                     GPVIDKVAQQRLLDHIENLKKSAKSYYQVAISSEIAENGIFVPPTLLEIDHISQLKHE
                     VFGPVLHVIRFDADKLDQVIADINSTGFGLTSGLHSRIDETVDLWLKSVHAGNLYVNR
                     NTVGAVVGVQPFGGMGLSGTGPKAGGPLYLQRLVNRQEWTLNGLQGNAQAVDFDLNFA
                     IRKVLSGAEQQTALDLAKSLARRSPLGKTYPMQGITGEKNEMIFVARPQIGISKGNLA
                     SQVQALIAIVTVGSQAVAEKSSELAKHASAFGKKLQVVDDFNSLDHLSTLIVLDLLSS
                     EEKLHHAERKGAILTYIEGLDLALSLLPLVHEKAISINTAAAGGNASLMSEMD"
     gene            7023..7673
                     /locus_tag="PXD69_001937"
     CDS             7023..7673
                     /locus_tag="PXD69_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha3 family transposase"
                     /protein_id="HDL6284102.1"
                     /translation="MRKSRLSQYKQHKLIELFVAGVIARTAAELVNVNKTTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEIDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQSATLLPIIREKVKPDSLVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIFLLKQLVKGGLG"
     gene            complement(7674..8561)
                     /locus_tag="PXD69_001938"
     CDS             complement(7674..8561)
                     /locus_tag="PXD69_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide transport protein"
                     /protein_id="HDL6284103.1"
                     /translation="MNKLTQLALISLAFTGSAFAAPKSFTYCLESSPAALNPQIATDG
                     ATLDVGQAIYNRLIDFEKGTTNLTPSLAERWEISEGGKIYTFFLRQNVQFQSNKSFTP
                     SRYFNADDVIFSINRQFDKTNPYHKLSGGNYEFFYGMNMQNIIKNVTKVDDYTVKIEL
                     SEPNAPFLANLAMDFMAIFSAEYANKMQIAGTPEKLDLEPIGTGAFQFYGYQKDAAVR
                     FTAFEHYWEGKAKIDRLVFSITPDASVRLAKLEKNECQAMPYPNPSDLSALKANKDIQ
                     LFEKSGLNIGYITFRGCPR"
     misc_feature    complement(8587..8732)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(8909..9919)
                     /gene="mglC"
                     /locus_tag="PXD69_001939"
     CDS             complement(8909..9919)
                     /gene="mglC"
                     /locus_tag="PXD69_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HDL6284104.1"
                     /translation="MSALQQNRTLDFFKQNAIYFVLLILLIVIIVQDPSFLSLRNFSN
                     ILSQSSVRLIIALGVAGLIVTQGTDLSAGRQVGLAAVISATLLQSMENMNKVFPNLSE
                     IPIPVVVLTVCAIGAVIGLFNGFVVAYLNVTPFIATMGTMIIVYGINSLYYDAVGSSP
                     IAGFSDDFSTFAQGFFRFGDFRLSYITIYAVIATIIMWTLWNKTRFGKNVFAIGGNPE
                     AARVSGVNVPLNLMGIYMLSGIFYAFGGMLEAGRIGSATNNLGFMYEMDAIAACVVGG
                     VSFAGGVGTIIGVVTGVLIFTVINYGLTYIGVNPYWQYIIKGGIIILAVAIDSLKYAK
                     KK"
     gene            complement(9933..11432)
                     /gene="mglA"
                     /locus_tag="PXD69_001940"
     CDS             complement(9933..11432)
                     /gene="mglA"
                     /locus_tag="PXD69_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HDL6284105.1"
                     /translation="MTGEVLLTMTNVSKSFPGVKALDNANLTVKSHSVHALMGENGAG
                     KSTLLKCLFGIYAKDEGDILFLGKPVNFKTSKEALENGISMVHQELNLVKQVTVMDNL
                     WLGRYPLKGPFVDHDKMYRDTKAIFDELDIDVDPRDKVAKLSVSQMQMIEIAKAFSYN
                     AKIVIMDEPTSSLSEKEVEHLFKIIQKLKDRGCGIIYISHKMDEIFKICDEITILRDG
                     KWVNTVAIKDTSMDQVVSMMVGRELTQRFPEKTNLPKEVILEVEHLTAKNQPSIQDVS
                     FSLRRGEILGIAGLVGAKRTDIVETIFGVREKAGGTIRLNDKEINNRNAFDAINNGFA
                     LVTEERRSTGIYANLSIEFNSLISNMKSYLGKFGLLSNKKMKSDTQWVIDSMNVKTPS
                     HQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDIGAKFEIYQLILELANKDK
                     GIIMISSEMPELLGVTDRILVMSNGKVAGIVETAHTSQEEILQLAAKYL"
     gene            complement(11504..12493)
                     /gene="mglB"
                     /locus_tag="PXD69_001941"
     CDS             complement(11504..12493)
                     /gene="mglB"
                     /locus_tag="PXD69_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL6284106.1"
                     /translation="MKKAVLSAVAMAVALGATISTAQAENRIGVTIYKYDDNFMALMR
                     KEIEKEGKTQKVELLMNDSQNTQSIQNDQVDVLLSKGVKALAINLVDPSAYKTIIQKA
                     KSEDVPVVFFNKDPGAAAIDSYPKAYYVGTEPKESGIIQGELIAKQWKAHPELDLNKD
                     GKIQFALLKGEPGHPDAEARTKYVVESLKAQGIDSEQIFMDAALWDAAQAKDKVDAWL
                     SSGKAKDIEVIISNNDGMALGALEATKAHGRKLPIFGVDALPEALQLIKKGELAGTVL
                     NDGVNQGKAVVQLSANLADGKDAVAGTQWKLENRVVRIPYVGVDKDNLSEFLK"
BASE COUNT         3654 a         2638 c         2695 g         3650 t
ORIGIN      
        1 gaattgagaa tttttggagc caagcaaaac gccatttgcg taaatttaac ggcataccta
       61 aagctcattt tgagctgtat ttgaaggaat gcgaatagcg ttttaatcac agtgacttaa
      121 aatctcaaat ttccatttta aaacaattgg ttaggggttg tttaagttag ttatctagga
      181 cagccctaaa ttttgtagtt ggaatttcaa cggagaaagt tatctataaa cttacaaaag
      241 ttatagaaaa tggaggcatt tttgcttaaa gtatgctatc tattcatatt aattgcatag
      301 ttaatcaaca actgaagaaa aattagaagt agatcataaa atcaacaaaa agtccgtgct
      361 ttttagctaa agattgttaa actcttttgt gttacaagtt tttaacataa aggagttttt
      421 tatgtctact tctcaacaac tcatccaaca aaccgaacat ttcggtgcca ataactacct
      481 acctctacct attgttatta gtaaagctaa aggcatttgg gttgaagatc ctgagggtaa
      541 tcgctatttg gatatgctta gtgcctactc agcggttaat caagggcatt gtcatccaaa
      601 aattgtacag gcactaaaag atcaagcaga caaagtaacg ctgacctctc gagcatttta
      661 taacgatcaa cttggtattt ggtatgaaaa aatctgcaaa ctcgctaata aagagatggc
      721 attaccgatg aatacgggtg cagaagcggt agaaacagcg attaaaactg ctcgccgttg
      781 gggttatgat gtgaaaggaa ttgcagaaaa tcaagcagaa atcatcgctt gtgttggcaa
      841 ttttcacgga cgaacaatgg ctgcagtatc tctctcgtct gatccggatt ataaacgtgg
      901 tttcgggccg atgttaggtg gcatcaaact tgttccatac ggtgatttag aagcattaaa
      961 agctgcgatt acaccaaaca cagcagcgtt tttggttgag ccaatccaag gtgaatctgg
     1021 cattcttatt ccacctgaag gtttcttgga acaggcttat gaactatgca aagagaataa
     1081 tgtgctgttt attgctgatg aaattcaggc aggtcttggg cgtactggca agttatttgc
     1141 aacagaatgg gaaggctttg agccagatat ttatattcta ggtaaagcac ttggtggcgg
     1201 ggtgttccca atctcttgtg tgttagcaaa tcgtgatatt ttaggcgtat tcaatcctgg
     1261 ctcgcacggt tcgacatttg gtggtaatcc attagcctgt gcggtatcta ttgcctcaat
     1321 tgatgtactg ttggaagaaa aacttgcaga gcgttcccgt gagttaggtg aatacttctt
     1381 ggcagagctg aaaaaaatcc aaaatccaat tattaaagaa gttcgtggac gtggactgtt
     1441 tattggcttg gagttacatc aaccagcacg cccattctgc gaaaaactca aagaaaaagg
     1501 cttactctgc aaagagaccc acgatacagt tatccgcttt gctccccctt tggtgattga
     1561 aaaattcaat ttggattggg cattggagaa aattcgggag gtgttggctt aattgtcatt
     1621 ttctctatat tttatcctgc caaatcgcct ttaacccttt ttggcaggaa gcaaaacagt
     1681 tgtaaaatgc tgattttgca aactttttcc aaaaatcaac cgcttgtaaa aggtggcttt
     1741 atgtcaaaca gaacagaaat aacagaccaa aatatccgaa tcccgtttcg ctatgctata
     1801 ttgcctgtga ttattatggt atcgattatg gcggtggcta tcatcaaatt tgaagcctca
     1861 cctcacgttc cgttgcttat tggggcaatt agtgccgctg tgattgcaat ggcacatggc
     1921 taccgttggg agacaattga aaaaggaatt tatagaggca ttcgtatggc tttaccagcg
     1981 attgttatca ttattatgat tgggctaacc atcggagctt ggctaggtgg tggaattgta
     2041 gctacgatga tttactacgg cttgaaattg atctctccgt cgctgttttt agtaactatc
     2101 tcaataattt gtgctattgt gacccttgcg attggtagct cgtggtctac aatgggaaca
     2161 atcggtgtag cggcgatggg gatcgggttt agtctcggca ttccggcacc gatggttgcc
     2221 ggtgcggtga tctcaggagc atatttcggc gataaaatgt cgccactgtc agacactacc
     2281 aatctggcag cagggattac cgaaaccaat ctgtttgaac atatccgcca tatgtttatc
     2341 actaccgtgc cggcgttcct gattgcgtta tctgtctatt tctattttgg tatggaattt
     2401 agagccgaaa atctcgatct tgctaaaatt gaagacatta tgcaggcaat gcaggaacat
     2461 ttcttgattt cgccttggtt gctattagtg cctttattag tcgtggtgtt ggtggcaaaa
     2521 aaagtgcctg ccttaccggc attagctgca gggataattc ttggttggct ctgccacgtt
     2581 tttgtgcaag gcggtgatgt cagcgtagca gtgattactc tgcacgacgg ctataaaatt
     2641 gagagcggcc acgagatgat tgataagctg ttcaaccgtg gtgggatcga gtcgatgatg
     2701 tacaccattt cccttacgat tgttgcgatg acttttggtg gcattgcaga gcaagctgga
     2761 atgttacatt cagtagtgga aaaaatcctt acccttgcaa aatcagcagg tagcttaatt
     2821 agtgctacga ttgtatcggc atttattacc aacgtaacga catctgagca atatatttct
     2881 attttattac caggcagaat gtatataaaa gcctataggg ataagggact aagttcgaga
     2941 aacctttctc gtgcattgga agacggagga acagttactt cggttcttgt accttggaat
     3001 acctgtggtg tttatgcgtt ctcaatgttg caagtgagtg cttttgaata tgcaccgtat
     3061 gcaataatga attggctcat tccactgatt gcgattggct tggcaacctt gaatatcaaa
     3121 attgagcgat tgccaccgga agaattagcc aaagaacctg aggaaattac tctgccaaaa
     3181 cgtggttgtt gtccataatt tatctaaata gtatttaata acaataggtt aagttaaata
     3241 acaagcggtc ggttttatct taaaatttgc aagtttatac ataaatttga tcgcttgctg
     3301 tatagaaagg aaaaatgatg tcataccaac ttttacctaa caccactatc cgtcctgaat
     3361 tgagccgtca ttaccgcttt gatgagcaaa ccctggtgca aaatctgata gaacaagcac
     3421 attgtgatga acaggctgat aacattaaaa agctcactac ccaattagtc ggtaaagtcc
     3481 gaactgcacg ccagaaagca agcggggttg atgcgttaat gcacgaattt tcactctcca
     3541 gccaagaggg ggtggcgttg atgtgccttg ccgaagcatt actacgcatt cctgacaccg
     3601 ccactgcgga taaattaatt cgagacaaaa ttgccaaagg ggattggcgt tcacacaccg
     3661 gcaacagccc ctctctgttt gtgaatgcag cggcgtgggg cttggtgatt accggcaaat
     3721 tggtttcaac ccacagcgaa agctcactct catcagcact ttcacgcctg atcgccaaag
     3781 gcggagaacc gctgatccgc aaaggtgtgg acgtagcaat gcgtatgctc ggcaagaaat
     3841 ttgtaacggg cgaaaccatt caacaggcga ttaaaaacgg cgaaaaacgc ttcgcaatgg
     3901 gttatcgtta cagctacgat atgctgggcg aagcggcact caccgccgaa gatgccaaac
     3961 gctattacaa cgactatgtt gcctctattc acgctgtggg tgccacctcg aaaggcttgg
     4021 gcgtgtataa atcctcgggt gtgtcggtca aactctccgc cattcaccct cgttattccc
     4081 tttcccaaca ccaacgtgtg atggacgaac tctatccacg tctgaaagaa ctgttcttgc
     4141 tggcgaaaaa gtatgacatc ggcttgaaca ttgatgccga agaagccgac cgcctcgaat
     4201 tgtcgcttga tttgatggac agactgcttg ccgaccctga tttggcaggg tttaacggca
     4261 ttggttttgt ggtgcaggcg taccaaaaac gttgcccgta tgtgatcgag catttaattg
     4321 agaccgcccg taaacataat cgccagctaa tgattcgctt ggtaaaaggc gcatattggg
     4381 acactgaaat caagcgggcg caaatggacg gtgcagaggg ctatccggtc ttctcccgta
     4441 aggtgcatac cgatttgaac tacatcgttt gtgccaaaaa attgctggcg gcgcaagatg
     4501 tgatctatcc gcaatttgcc acccacaacg ctcaaactct cgccaccatt taccacttgg
     4561 cacagggcaa acgttttgag tttcaatgct tgcacggtat gggagagagc ttgtacgacc
     4621 aagtggttgg cagcgataat cttaacgtgc aatgtcgcat ttatgcccct gtcggtactt
     4681 atcaaaccct gcttgcctat ttagtacgtc gcttgttgga aaacggagcg aacagctcat
     4741 ttgttagcca aattgtggat gaaaatctca gtgtagatga tctggctcaa gcccctgttc
     4801 aaaaagcaga actgaccaat ggcactatgc acccgaaaat tccattgcca gtcgatttat
     4861 ttgacgacaa tcgtgttaat tccaaaggct atgatttaac tgatgcagta agcctacaaa
     4921 atttagaaaa tgccctcaat gaacttacca aacagcatta ccgtgctgaa ccacagctgg
     4981 caaatgataa tacaagcggt caagaaagcc gaaaaattta caatccagcg aaccaagctg
     5041 aattagtcgg cgaagtgatt gatgccaccg aaaacgatat ggaacaggcg tttgaaagtg
     5101 cggcggcgtt ccaaagtgaa tgggcgaata cttcccctgc ggtgcgtgcc gagtgcttag
     5161 aaaaaatggc ggacttgatg gaagccaata tgccacaact gttcgatttg gcggtgcgtg
     5221 aggcaggcaa aacgctcaac aatgcaattg ctgaagtgcg tgaagccgtc gatttctgtc
     5281 gttattatgc caaagaggta cgcaacaaca ttgaagcata caaaaatccg cgtggcattg
     5341 tagtagcaat tagcccgtgg aactttccgt tagcgatttt tgtgggtgaa gtttcatctg
     5401 cgttggtggc aggcaatgtg gtactagcaa aaccagctga acaaacttcg ttaatggcac
     5461 attatgctgt cagccttttc taccaagcag gtgtgccgaa agcggcgttg caatgcttac
     5521 cgggtagagg aaaaacggtt ggggtggcgt tggtggcaga tcatcgtgtg aacggcgtga
     5581 tttttactgg ttcaacagag acagctaaaa acattaaccg caatttgcac aaaaacgaga
     5641 aaattatacc gcttattgcc gaaactggcg gacaaaatgc aatgattgtt gatagctcgg
     5701 cactgggcga gcaggttgtg atagatgttt taaactccgc atttgactca gcagggcaac
     5761 gttgttcggc attgcgtgtg ctgtatctgc aacgtgatgt tgccgatcac attctcacaa
     5821 tgctcaaagg agcaatggcg gagttgaaag ttggtcttcc acaacactta actaccgatg
     5881 tcggaccagt aatcgataaa gtcgcacaac aacgcttgct cgatcatatt gaaaatctca
     5941 aaaaatcggc gaaaagttac tatcaggtgg ctatctcctc tgaaattgcc gaaaatggta
     6001 ttttcgtacc gccaacgctg ttagaaatag atcatatcag ccagcttaaa cacgaagtat
     6061 tcggaccggt gctacacgtt atccgttttg atgcggataa actcgaccaa gtgattgccg
     6121 acataaactc cacaggtttc ggtctaacca gcggtttgca tagccgaatt gatgaaacgg
     6181 tggatttatg gttgaaatct gtccacgctg gaaatctgta tgtaaaccgt aacacggtag
     6241 gggctgtggt cggcgtacag ccattcggtg gaatggggtt atcaggaact gggccgaaag
     6301 ctggcgggcc gctctatcta caacgtttag taaaccgcca agaatggaca ttgaacggtt
     6361 tacagggcaa tgcacaagcg gtcgattttg acttaaattt tgcaatccgc aaggttctaa
     6421 gtggagctga gcagcaaacg gcgttagatc tggccaaaag ccttgcacgc cgctcgccac
     6481 tcggaaaaac ctacccaatg cagggtatta ccggcgagaa aaacgagatg attttcgtgg
     6541 ctcgcccaca gattgggatt agcaaaggta atttggcttc acaggtgcaa gccttgattg
     6601 ccattgtaac ggtcggcagc caagcggtgg cagaaaaatc aagcgagctg gcaaaacacg
     6661 cctctgcctt tggtaagaaa ttacaggtgg tggatgattt caacagtctc gatcacctca
     6721 gcacactcat tgtgcttgac ctgctttcta gtgaggaaaa attgcatcat gccgaacgca
     6781 aaggggcgat tttgacctac atcgaagggc tggatttagc gctctcactg ctgccgttgg
     6841 tacacgagaa agcaatcagc atcaacaccg ctgccgcagg gggaaatgcc agcttaatga
     6901 gtgaaatgga ttaagcaaca aacaaaagag tataagaggg cagatcacaa tgatctgcct
     6961 ttttatttta aggggctgtc ctagataacg actaaaactt ccatttaggt taagataacc
     7021 ctatgagaaa aagtcgtcta agtcagtaca aacaacataa actcatagag ctgtttgtag
     7081 caggcgtaat cgctcgaaca gccgcagagt tagtgaatgt aaataaaacc accgcagcct
     7141 attattttca ccgtttgcga ttgctcatct atcaacatag ccctcatttg gaaatgtttg
     7201 agggagaaat tgagattgat gagagctatt tcggcggtca tcgcaagggt aaacgaggtc
     7261 gtggtgcagc aggcaaaacc gccgtattcg ggcttttaaa gcgtgacggc aaggtttata
     7321 ccgtagtagt gccgaacaca caatctgcta cacttttgcc gattattcgg gaaaaggtga
     7381 agcccgatag ccttgtttac accgattttt atcgaagcta tgatgtgctt gatgtgagtg
     7441 aatttaacca ttttcgtatc aatcacagca cacacttcgc agaaaatcaa aatcacatta
     7501 acggaattga gaatttttgg agtcaagcaa aacgtcattt acgcaagttt aatggtattc
     7561 cgaaagccca ttttgagcta tatttgaaag aatgcgaatg gcgttttaat cacagtgact
     7621 taaaatctca aatattcctt ttaaaacaat tggttaaagg ggggttaggt tagttatcta
     7681 ggacagcccc taaaagtaat ataaccgata tttaggcctg acttttcaaa taattgaata
     7741 tctttattcg cttttaaagc agacaaatct gacgggttcg gataaggcat cgcttggcat
     7801 tcgttcttct ccaatttagc taaacgtact gaggcatcgg gcgtaatact aaatacaagg
     7861 cgatctatct tcgcttttcc ttcccaatag tgttcaaatg ctgtaaatct taccgctgcg
     7921 tccttttggt aaccatagaa ctggaatgca cctgtgccta taggttctaa atctaatttt
     7981 tccggcgtac ccgctatttg cattttattt gcatattccg cagaaaagat cgccataaaa
     8041 tccatagcta aattagcaag aaagggggca ttcggttcag ataattcgat ttttaccgtg
     8101 taatcatcta cttttgttac atttttgatg atgttttgca tattcattcc gtagaaaaac
     8161 tcatagttac cgccggacaa tttgtgatat ggattcgtct tatcaaactg acggttaatc
     8221 gaaaaaataa catcatcagc attaaaataa cgactagggg taaaactttt attactctgg
     8281 aactgcacat tctgacgcaa gaaaaaagta taaatttttc cgccttcact gatttcccat
     8341 cgctctgcca gagaaggagt gaggttagtg gtaccttttt caaaatcaat caggcgatta
     8401 tagattgctt gcccgacatc aagagtagct ccatctgttg caatctgagg attcaatgct
     8461 gccggagatg attccaaaca gtaagtaaaa gatttaggtg ctgcgaaagc agaacctgta
     8521 aatgctaaag aaataagtgc aagttgtgtc agcttgttca ttgtcatatc cttaaatgtt
     8581 aagcaataaa aaaccctttc aaaagttgcc ttccgaaagg gttagaattg ggtttgcgat
     8641 tttggattgc gtttgccatt tcaggttttc ggaagatatc ttccgaacac gccaaatgcc
     8701 cgaaagatta atcggtcaaa tggtagtgat gatgtttaac gcaatagctc ataatattct
     8761 ccaaaattga atgtttagga atttacgctt tttaaaaatc aattgcaaac gttttcttta
     8821 aaattttgta aaaaattcaa catttttcac cgcttgtatc gtacctagga gcaaatggcg
     8881 atttgctcct aggtttccaa gcaataggct attttttctt cgcatattta agtgagtcaa
     8941 tcgctaccgc caagataatg atgccacctt taataatata ttgccagtaa gggtttactc
     9001 caatataggt taagccgtag ttgataacgg tgaagattaa cacccctgtt actacaccga
     9061 tgatagtacc cacaccaccg gcaaaggata ccccacctac cacacaagcg gcaatggcat
     9121 ccatttcata cataaagcct aagttgttgg ttgcactacc gatacgacct gcttctaaca
     9181 taccgccgaa ggcatagaag atgcctgaaa gcatataaat acccatcagg ttaagcggta
     9241 cgtttacacc ggaaactcgt gctgcttcag ggttgccgcc aatagcaaat acgtttttac
     9301 cgaagcgggt tttattccat aacgtccaca taataatggt agcaatcacg gcataaatag
     9361 tgatgtagga tagcctaaag tcgccaaagc ggaagaagcc ttgtgcaaag gttgagaaat
     9421 catcgctaaa gcctgcaatt ggcgatgagc ctactgcatc gtagtaaagc gagttgatac
     9481 catacacaat aatcattgtt cccatcgtgg caataaacgg tgttacgttg aggtaagcca
     9541 ccacaaagcc gttaaataaa ccaatgacag caccgatggc acacacggtt aatacaacca
     9601 caggaatcgg gatttccgag aggtttggga ataccttgtt catattttcc attgattgga
     9661 gcaaggtggc ggaaattacc gctgccaagc ccacttggcg accggcagat aagtctgtcc
     9721 cttgtgttac aatcaagcct gcaaccccta atgcaataat caaacgcaca gaagattgcg
     9781 ataaaatgtt actgaagtta cgcaagctca agaaacttgg gtcttgcaca ataatcacaa
     9841 taagtaagat taataatacg aagtaaatcg cattttgttt aaaaaaatcg agtgttctat
     9901 tttgttgtaa agcagacata cttcactcct tgttataaat attttgctgc gagttgcaag
     9961 atttcttctt gcgaggtgtg agcggtttcg acaatacctg caactttccc gttactcatc
    10021 actaaaattc ggtctgtgac cccaagcaat tccggcattt ccgatgaaat cataatgatg
    10081 cctttatctt tattcgccag ctctaaaatc aactggtaaa tttcaaattt tgccccgata
    10141 tcgataccac gggtcggctc gtcaagcatc aagatttcag gctgggttaa caaccaacgc
    10201 ccgataatca ctttttgttg gttaccgccg gaaagtgagc caatatgcgt ttgatgcgat
    10261 ggggttttta cattcatcga atcaattacc cattgggtat cgcttttcat ttttttattg
    10321 ctcagtaagc cgaacttgcc tagataagac ttcatatttg aaatcagaga gttaaactca
    10381 atgcttaagt tggcataaat ccctgttgaa cggcgttctt ctgtaaccaa tgcaaagccg
    10441 ttattaatcg catcaaaagc gttgcggtta ttgatttctt tatcgtttag tcggatagtg
    10501 ccgcctgctt tctcccgtac accgaaaatg gtttcaacaa tatcagtccg ttttgctcca
    10561 actaagccgg cgatgcctaa aatttcccct ctgcgtaagc taaagctgac atcttgaata
    10621 gagggttgat tttttgccgt taaatgctca acttcaagaa tcacttcttt cggcagattg
    10681 gttttttcag ggaaacgctg ggtcagctca cgccctacca tcattgaaac cacttgatcc
    10741 attgaggtat ctttaattgc aacggtgttt acccatttac cgtcacgcaa aatggtaatt
    10801 tcatcacaaa ttttaaaaat ttcgtccatt ttgtgtgaaa tatagataat gccacagcct
    10861 ctgtctttca gtttttggat aattttaaat aaatgctcga cttctttttc tgaaagtgac
    10921 gaagttggtt cgtccataat cacaattttg gcattgtaag agaaagcttt tgcaatctcg
    10981 atcatctgca tttgtgaaac cgataatttg gctactttat cacgtggatc aacatcaata
    11041 tctaattcat caaaaatcgc cttagtatca cgatacattt tatcgtgatc tacaaaaggc
    11101 ccttttagtg ggtaacgacc tagccataag ttatccatta ccgtcacttg ttttactagg
    11161 ttcaactctt ggtgaaccat tgagatccca ttttctaacg cctcttttga ggtcttaaaa
    11221 ttcaccggct tgccaagaaa gagaatatct ccctcatctt tagcataaat cccaaataag
    11281 catttcagta acgttgattt acctgctcca ttctctccca ttaaggcgtg aacactatgg
    11341 gatttcaccg ttaagttagc attatctaag gcttttaccc cgggaaatga cttgctaaca
    11401 tttgtcattg tgagtaaaac ttcacctgtc atatctcacc cctgattaca tcgaaaaatc
    11461 gaaaaaaagc acgggtatcc atcacccgtg ctaaaagcgt gaattatttt aaaaattcag
    11521 ataagttgtc tttatcgaca ccaacgtaag gaatacgcac cacacggttt tccaatttcc
    11581 attgtgtacc agcaactgca tctttaccgt ctgctaagtt agcagaaagc tgaacaaccg
    11641 ctttaccttg gtttacacca tcatttaata ccgtaccggc taattcacct tttttgatta
    11701 attgaagtgc ttctggcaat gcatctacac cgaagattgg taattttcta ccgtgagctt
    11761 tggttgcttc taatgcacct aacgccatac catcattatt agaaataatt acttcgatgt
    11821 ctttcgcttt accacttgat aaccaagcat ccactttatc tttagcttgg gctgcatccc
    11881 ataatgctgc gtccataaag atttgctcac tgtcgatacc ttgtgctttt aagctttcta
    11941 ccacatattt agtacgtgct tccgcatcag ggtgacccgg ctcacctttt aataaggcaa
    12001 attggatttt accgtcttta ttcaagtcta attcaggatg ggctttccac tgttttgcaa
    12061 ttaactcacc ttgaataatg cctgactctt tcggctcagt acctacataa taagctttcg
    12121 gatagctatc aatcgcagct gcacccgggt ctttattgaa gaacaccaca ggcacatctt
    12181 cactttttgc tttttgaata attgttttat aagctgatgg atccactaag ttaattgcta
    12241 atgctttaac ccctttagaa agtaatacat caacttggtc gttttgaata gattgcgtat
    12301 tttgcgagtc attcattaat aactcgactt tttgtgtttt accctctttt tcgatttctt
    12361 tacgcattaa tgccataaag ttatcgtcat atttataaat tgttacacca atacggtttt
    12421 cagcttgagc tgtactgatc gttgcaccta atgcgactgc cattgccact gcacttaata
    12481 ctgctttctt catagtagat cacctctttt atgtgtttat agggaaatga attgcttacc
    12541 ataagcaact tggtgcaaag tataactaat tttaaaaaaa caatccgtga tcattctcac
    12601 agaattaaga caaagtggag aaatttttaa ttttaag
//
LOCUS       DANLXO010000082        12600 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.082, whole genome shotgun sequence.
ACCESSION   DANLXO010000082 DANLXO010000000
VERSION     DANLXO010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12600
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.082"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(184..606)
                     /locus_tag="PXD69_001942"
     CDS             complement(184..606)
                     /locus_tag="PXD69_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284107.1"
                     /translation="MSSIKEIFSTKNSPINVLMQTEWFLGFILIVVYLDAYFQLVHQV
                     PIYIAIQQKEIYLTKTIDYIAAIFFFSVTFTALFTMMRLLHIFILSDLLDKIGCNTYE
                     LPKIEDIHKYEMLSILKIQAAKENNAELRYYVKKKKKK"
     gene            complement(676..1809)
                     /locus_tag="PXD69_001943"
     CDS             complement(676..1809)
                     /locus_tag="PXD69_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL6284108.1"
                     /translation="MKTIKIGLVGTGYIGRCHAIAYAQAPTLFPLKGKIQLEYLAEIN
                     QALADQKAREFGFQRATDDWRKLVTDPNVDVVDICTPNFLHKEIALEAIKHGKHVYSE
                     KPLALTAQDAKEMVIAAQQAGVKTLVGFNYIKNPTTQLARQIIQNGEIGEVVHFYGTH
                     NEDYLANPNTPIDWHCYKAKAGLGTLGDLAAHIVSIAHYLVGSDIERVIGDMQTVIEE
                     RPSPHNPAEKIKVENEDQASSLIRFANGVMGTLESSRISCGRKMGLTYVVTGTKGTLS
                     YTQERMAELKLYLHDDDKSRQGFKTILVGPEHPDYAAFCVSAGHGIGFNDQKAVEIRD
                     LINGIAADDPMYPDFEEGYKISRVLEAIAKSAEEKRWVEVSEI"
     gene            complement(1940..2968)
                     /locus_tag="PXD69_001944"
     CDS             complement(1940..2968)
                     /locus_tag="PXD69_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6284109.1"
                     /translation="MTTQFLKNMGMVDDKGKIDFIAFFERFGVLIFLILLIIFFTSQN
                     GAFLSQRNIYNVLTEVSIFGIMAVGMTFVILTAGIDLSVGSILAVTAMFAAYIIKGDN
                     TVTLEAGAWGGMSWLIGLSICLGLGTFIGWLHGLGVTKLKLPPFIITLGGMTIWRGLT
                     LVLNNGSPIAGFDEGYRWWGRGDILGVPVPVVIFAVVAIIGYFALHKTRWGRYVYSVG
                     GNPEAARLAGVNINRTLVSVYVVIGALAGLAGFILSARLGSAESVAGVSFELRVIASV
                     VIGGTSLMGGYGRVTGTIIGSIIMGVLINGLVLMDVSAYYQQIIMGLIIILAVAFDTY
                     AKSRRGAL"
     gene            complement(2980..4524)
                     /locus_tag="PXD69_001945"
     CDS             complement(2980..4524)
                     /locus_tag="PXD69_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL6284110.1"
                     /translation="MSTPLLEVKDLTKSFSGVMALNGVKLTVGKGEVHALLGENGAGK
                     STLLKALSGAQPQTSGEIIFNGETLSLSDSPFDRQLKGIVTIYQEFNLLPNMTVAENF
                     FLGREPVKGLFVNEKAVNEEAQLVLDNLGLNIKPDTQVSRLSVAQQQMVEIARAMTLN
                     AKLIIMDEPSAALSDKEVETLHQIVRDLKSRGISVIYVTHRLNEVFALCDRFTVFQDG
                     RYSGEGEVKNVNVDQIIKMMVGREVAFTRRPPEETHHTHRPIRLAVKNLHREKPAFDP
                     HGIALHGVSFNIHEGEVLGIAGLVGAGRTEIARCLFGVENYTADEISLDGKPYAATSP
                     LDALEKGVALVPEDRKKEGLVLGLPIKTNMTLPILSKLLKGNLFVDNQKEDDLIETYR
                     QALRIKMASSELEARKLSGGNQQKVILARCMALNPKVLIVDEPTRGIDVGAKSEVHQV
                     LFDMAKQGVAVLVISSDLPEIMAISDRIITLSEGRVTGEIHGDDATEEKLMSMMAVGV
                     QRKAAA"
     gene            complement(4575..5513)
                     /locus_tag="PXD69_001946"
     CDS             complement(4575..5513)
                     /locus_tag="PXD69_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HDL6284111.1"
                     /translation="MKKRIKFVLSALTLGLAMNSFAKDELVVFSLPNLSSPFEVQLQK
                     VAVETSKKLEIKLQVLDGQSSSTKQASDLENAITRGAKGIIISPNDVNAISGAVEEII
                     KEKIPAATLDRKVESSKPVPHFGANNYTGGQEVAKAVKAKYPNGAKIILLTGQPGSTS
                     NIERTKGIRDELAAGGDKYKIVVDQTGNWLRSEGLRIIESVLPTLKEKPEVIISANDD
                     MALGAIEALRSQGLKAGDILVTGFDSTPEALARVKDGWLYLTADQRPSFAVSTALEQV
                     VGNIRESKEVSGADYPPKIILKDNLQEAERFAEISE"
     gene            complement(5845..7356)
                     /locus_tag="PXD69_001947"
     CDS             complement(5845..7356)
                     /locus_tag="PXD69_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL6284112.1"
                     /translation="MSQFVQNFINGAVVESQSQRVTSVFNPATGEETKKVKLSLPNEV
                     DAAIAAADQAFKSWSQQSPLRRARILFKFKELLEANFDELARLISSEHGKIYSDAIGE
                     LTRGLEVVEFATGIPHLQKGEFSANAGRGIDIHSIQQPLGVVAGITPFNFPAMVPMWM
                     FPVALACGNTFVLKPSEKDPSVSIRLAELLKEAGLPDGVFNVVQGDKEAVDILLTDSR
                     IQAVSFVGSTAIAQYIYEKGSANGKRVQALGGAKNHALIMPDADVQGTINALLGAAFG
                     AAGERCMALSVAVVVGDELADKIIEELIPKVKALKIGSGLLPQGVLENDMGPVISKEH
                     KAKIESYIDQGVAQGAKLCVDGRGYKVEGFENGYFVGGTLFDNVTPEMTIWQDEIFGP
                     VLSVVRVKDYAEGIALINSHQYGNGSAIFTADGDSARQFTQDVQAGMVGVNIPIPVPM
                     AFHCFGGWKASIFGPLNVYGTDGVRFYTRMKTITTRWPDSSVRSQAAFNFPTL"
     gene            7575..8399
                     /gene="iolB"
                     /locus_tag="PXD69_001948"
     CDS             7575..8399
                     /gene="iolB"
                     /locus_tag="PXD69_001948"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HDL6284113.1"
                     /translation="MSSPLLSKPNFNQHEGLIQHITPENAQWEYVGFDVYQLSKQQIT
                     LESGENELCLVFVTGFGSVYVDDYAFENIGNRTTPFEKIPPYAVYIPPHKSVLVKTEL
                     NLELAVCKAPSQGNYPVRLISPNHIGVEKRGFGNNQRLVHNILPETEAADSLLVVEVF
                     TDEGNTSSYPSHKHDDKHSTEETYLEETYYHRFDPPQGFAMQRVYTDDRTLDECMAVY
                     DKNVVKVPRGYHPVATIAGYNNYYLNVMAGPVRKWKFTWEQDHLWVNSETYKAKFE"
     gene            complement(8475..9926)
                     /locus_tag="PXD69_001949"
     CDS             complement(8475..9926)
                     /locus_tag="PXD69_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL6284114.1"
                     /translation="MPNHKFLLLRFQAYINGKFVSSQNGKTFTVQNPTNGEKIGEVAD
                     LGTEETAQAIEAAAVAQKKWQALLPKERSVILRKWFELIMQNQEELAQILSLEQGKPL
                     AESRGEIAYGASFIEWFAEESKRIYGDVLPQDKAGRRLFVTKQPIGVVAAITPWNFPN
                     AMITRKAAPALAAGCAIVIKPAAETPLSALALAQLADQAGIPKGVFNIITSSDVEGVG
                     RELSTNPTVRKLTFTGSTRVGKILMQQSAGTVKKLALELGGNAPAIVFDDADLDTAVE
                     GVFASKFRNGGQTCVCANRIYVQAGIYEQFLAKLSEKVAQIKLGSPFEEEVTIGALIS
                     ERAVEKVESHINDALSLGAELVLGGERHALGGTFFQPTILKNVTQAMKVAREETFAPL
                     APIFKFETEEEVIQWANDTEFGLAAYLFSQNIGRIWRVSEQLEYGIVGINEGIISNEI
                     APFGGWKESGLGREGSKYGIEEFLEIKYLCMKV"
     gene            complement(10104..11414)
                     /locus_tag="PXD69_001950"
     CDS             complement(10104..11414)
                     /locus_tag="PXD69_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL6284115.1"
                     /translation="MIYAEIFVVLAAIYLGLRSGGLGIGLYGGLGLAILTLGFGLPMG
                     SIPVDVMLIIMTVVIGAAVLQAVGGMDLLVRYAEVLMRKNPKYINFIAPMITWLMTIM
                     AGTGFIVFSTLPVIAEVAKESGIRPSRALAGSVVSSQLAIAGSPLSAAMAAMIAVMEN
                     NSVTFFQVIAVCLPVSFIASMVAAFVASKQGCELQNDVVYLERLKAGIVSPSRKLASE
                     STYSKGAKLSIGIFLLATVLVVLLAAVPGLKPVYENGKSMSTRDIIIVMMLASSCLMM
                     LVGKIKPDTIVASPIFRSGMTSIAVIIGIVTLGMTFVDAHLIEIKASIGNILTEYPML
                     LAVVLFFTCALLYSQGSTSALIIPLAVSLGIPNWAILASFIAITGIFILPTYPTSLAA
                     MELDTTGSTRAGKYIIDHPFMLPALVGVAVGLAFGFVWAPMIVS"
     gene            complement(11430..12125)
                     /locus_tag="PXD69_001951"
     CDS             complement(11430..12125)
                     /locus_tag="PXD69_001951"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HDL6284116.1"
                     /translation="MARNIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSI
                     PDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTAHYWFEHLKAKSQVEM
                     LSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQLEAQGLTFICPTENGQKAVMDS
                     IYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPMRYVDSTL
                     VLVKKAIDWYQTH"
     gene            12341..>12600
                     /locus_tag="PXD69_001952"
     CDS             12341..>12600
                     /locus_tag="PXD69_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6284117.1"
                     /translation="MKNIETKWLEDFLTLEECRHFSQAAEKRNLSQSAFSRRILALEE
                     VVGVKLFDRTSIPLQLTEQGKLFHSQTRNLLQQLQNNLDELLG"
BASE COUNT         3677 a         2875 c         2440 g         3608 t
ORIGIN      
        1 gaattatcaa aagagttaat acaataccaa taaaatattt aaaattttct gtttgcattc
       61 caatatattc aaaagtgaat ctaatcccaa gagggtaatt cccccattct tttgccaaac
      121 agatatgaat aatcaaaaag aagataatac ctaaaaaacg tcgagatatt gatattctga
      181 ctctcatttt ttcttcttct ttttcacata gtatctcaac tctgcattat tttccttagc
      241 tgcttgtatt tttaatattg aaagcatttc gtatttgtgt atatcttcaa ttttaggcag
      301 ctcataagtg ttacatccta ttttatcaag aaggtctgat aaaataaaaa tatgtaataa
      361 acgcatcatt gtaaataatg cagtaaatgt aactgaaaaa aagaaaattg ctgcaatata
      421 atcaatggtt tttgtgagat atatttcctt ttgctgtatc gcaatataga taggcacttg
      481 atgaacaagt tggaagtaag catccaaata aacaactatc aatatgaagc ctaaaaacca
      541 ttctgtttgc ataagaacat tgatagggct gttttttgtg ctaaaaattt ctttaattga
      601 actcataatt tttccttaaa tgtaaaaaaa cgtacctcaa ccaatttgag atacgtttct
      661 attttaatgt aattattaaa tctcactcac ctccacccac cttttctcct ccgccgattt
      721 tgctatcgct tccaatactc tggagatttt atagccttct tcaaaatcgg gatacatcgg
      781 gtcatcagcg gcgatgccgt tgatgaggtc acggatttcc accgcttttt ggtcgttaaa
      841 accgatgccg tgaccggcac tcacacaaaa agcagcgtag tcgggatgtt ccgggccgac
      901 taaaatggtt ttgaatcctt ggcgggattt atcgtcatcg tgcaaataga gtttgagttc
      961 tgccattcgt tcttgggtat agctgagcgt gcctttagta cctgtaacga cataggtcag
     1021 ccccatttta cgcccgcagg aaatgcggga gctttcgagc gtgcccatta ccccattagc
     1081 aaatcgtatg agactacttg cctgatcttc gttttctact ttgatttttt ctgctggatt
     1141 gtgcggacta gggcgttctt caatcactgt ttgcatatcg ccgataacac gctcaatgtc
     1201 tgaaccaacc aaatagtgtg cgatactgac aatatgtgcg gctaaatctc ccaacgtacc
     1261 aagcccggct ttggctttgt agcagtgcca atcaatcggg gtattagggt tggcgagata
     1321 atcttcgtta tgcgtgccgt agaaatgcac cacctcacca atttcgccgt tttgaataat
     1381 ttggcgagcc agttgggtgg ttggattttt gatatagttg aaaccgacca aggttttaac
     1441 tcccgcttgt tgagcggcaa tcaccatttc tttggcatct tgggcggtga gtgcaagcgg
     1501 tttttctgaa tagacgtgtt tgccgtgttt aatcgcttct aaggcaattt ctttgtgcag
     1561 aaaatttggt gtacaaatgt ccaccacatc gacattcgga tcggtaacca attttcgcca
     1621 atcgtcagta gcacgctgaa agccaaattc tcgggctttt tgatcggcta atgcttggtt
     1681 gatttcggca aggtattcca gttggatttt gcctttaagt ggaaacaggg ttggggcttg
     1741 agcgtaggca atggcgtggc agcgaccgat atagccggtg ccaactaagc cgattttgat
     1801 ggttttcata atactatccc agtagggtgc gtttgctaac gcaccattag aattttcagt
     1861 gcattggcaa acgcacccta taagaaagcg gtctggtttt gcaaaatttt tacaaaatca
     1921 gaccgcttgt gttagctatc tataatgctc ctcgtctgct cttcgcatag gtgtcgaagg
     1981 caacggcaag gatgatgatt aagcccataa tgatttgttg gtagtaagcg gaaacgtcca
     2041 ttagtactaa accgttaatc aatacaccca taataatgga gccgatgatg gtgcctgtga
     2101 ctcgtccgta tccccccatt agggaagttc cgccgataac cactgaggca attacacgta
     2161 gctcaaaaga aacgccggca acggattcgg cactgcctaa acgggcggag agaatgaaac
     2221 cggcaagtcc tgccaatgct ccgatcacca cataaacact gactaaggta cggttaatat
     2281 tcacaccggc taaacgggct gcttccggat tgccacctac cgagtacaca tagcgtcccc
     2341 agcgggtttt atgcaatgcg aagtaaccga taatggcgac tacggcaaaa atcactaccg
     2401 gcaccggtac gcctaaaata tcgccacgtc cccaccagcg gtaaccttcg tcaaatccgg
     2461 caattggcga gccgttattt aacacaagtg ttaaaccacg ccaaattgtc ataccgccaa
     2521 gcgtgataat aaacggtggc agtttgagtt tagtgacgcc taagccgtgt aaccaaccaa
     2581 tgaaagtgcc taaacctaaa cagatactca aacctatcag ccagctcatt ccgccccaag
     2641 caccggcttc tagcgttacc gtattatcgc ctttgataat ataggccgcg aacattgcgg
     2701 taacagcaag gattgagccg acagagagat cgatccctgc agttaagatg acgaaagtca
     2761 ttcctaccgc cataatgccg aaaatcgaca cttcggttaa aacgttatag atgttgcgtt
     2821 gcgataaaaa tgccccgttt tgtgaagtga agaaaataat cagtaagatc aagaaaatca
     2881 gtacgccgaa acgttcaaag aaggcgataa aatcgatttt tcctttgtca tcgaccatac
     2941 ccatattttt tagaaattgc gttgtcatac aaacctctct tatgctgccg ctttacgctg
     3001 aacgccaaca gccatcattg acattaattt ttcttcggtg gcatcatcgc cgtgaatttc
     3061 gccagttacc cgaccttcgg aaagagtgat aatgcggtcg gaaatcgcca taatttccgg
     3121 taaatcggag gaaatcacta ataccgcaac accttgtttt gccatatcaa acagcacttg
     3181 gtgaacctca gattttgccc caacatcaat acctcgtgtc ggctcatcaa caattagtac
     3241 tttcgggttg agtgccatac aacgggctaa aatcactttt tgctgattac cacccgataa
     3301 tttgcgggct tcaagttcgc tacttgccat tttgatgcgt aacgcttggc ggtaggtttc
     3361 gattaaatca tcttcttttt gattatcgac aaacaagtta cccttcaata atttgcttaa
     3421 aatcggcagg gtcatattgg ttttaatcgg taaaccgaga actaagccct cttttttgcg
     3481 atcttccggc acaagggcaa cccctttttc caaagcatct aacggcgagg tggcagcata
     3541 aggcttaccg tctaggctga tttcatcagc cgtataattt tctaccccaa acaagcaacg
     3601 ggcaatttca gttcgccctg cgccaactaa gccggcgatc cctaatactt caccctcgtg
     3661 aatgttaaaa gagacaccgt ggagagcaat gccgtgtgga tcgaatgccg gtttttcccg
     3721 atgcagattt ttcacagcta aacgtattgg tcggtgggta tggtgagtct cttctggtgg
     3781 acggcgagta aaggcaactt cacgtcctac catcatttta ataatttgat cgacattcac
     3841 atttttgact tcaccctcac cagaatagcg cccgtcttgg aaaacggtga aacggtcgca
     3901 tagggcaaac acttcgttta agcggtgggt cacataaatc acgctaatgc cacggctttt
     3961 taaatcacgc acgatttggt gtagtgtttc cacttcttta tcacttaagg cagcggacgg
     4021 ttcgtccata ataatcaact tagcgtttaa ggtcattgca cgggcaatct cgaccatctg
     4081 ctgttgtgcc acacttaaac gggaaacttg ggtgtcaggt ttgatattta agccgagatt
     4141 atccagcact aattgtgctt cctcattcac cgctttttca ttgacgaata aacctttcac
     4201 cggctctctg cccaaaaaga aattttcagc aaccgtcata ttcggtaaca agttaaattc
     4261 ttgataaatc gttacgatgc ctttgagttg gcgatcaaac ggggaatcgc tcaaacttaa
     4321 ggtttcaccg ttaaagataa tttcgccact tgtttgtggc tgagcgcctg aaagtgcttt
     4381 taataaggtc gattttcctg caccgttttc acccaacaat gcgtgaactt cgccttttcc
     4441 cacagtcagt ttcacgccat tgagtgccat aacaccagag aaactttttg tcagatcttt
     4501 cacttcaagt aagggagtag acatacaacc tccgtaaaaa aacgccctcc ggcctcagcc
     4561 ggaaggcaga taaattattc gctgatttct gcaaaacgtt ctgcttcttg cagattatct
     4621 ttcaggataa tttttggcgg atagtccgca ccgctcactt ctttgctctc acggatattg
     4681 ccaaccactt gctctaatgc ggtgcttacc gcaaaacttg ggcgttggtc agcggtgaga
     4741 tacaaccagc catctttcac acgtgcaaga gcctcagggg ttgagtcaaa gccggttact
     4801 aaaatatcgc cggctttcaa accttggcta cgcaatgctt caatcgcacc aagtgccata
     4861 tcgtcattcg ctgaaataat cacttctggt ttctctttta aggttggtaa cacactttca
     4921 ataatgcgta atccctcaga acggagccag ttaccggttt gatcaaccac gattttatat
     4981 ttgtcaccac cggcagctaa ttcatcacga atacctttgg tacgttcaat gttagaggtt
     5041 gaacccggct ggccggttaa aagaataatt tttgccccat tcgggtattt ggctttcact
     5101 gcttttgcga cttcttgacc gcctgtgtag ttatttgccc caaagtgtgg aaccggctta
     5161 ctgctttcaa cttttcggtc taatgtcgca gcaggaattt tttctttgat aatttcttcc
     5221 actgcacctg aaatcgcatt cacatcattc ggggaaatga taatgccttt agcaccacgg
     5281 gtaattgcat tttctaagtc agaagcctgc ttagtagaag aactttgccc gtctaatact
     5341 tgcaatttga tctccaactt tttactggtt tctaccgcta ctttttgtag ttgaacttca
     5401 aacgggctgg ataggttcgg taagctaaat accacaagct catctttcgc aaagctgttc
     5461 attgctaagc ctaacgttaa agcactcaat acaaatttaa tacgcttttt cattacaaaa
     5521 tcctcttttt aagatgggaa ttgacggcga atattgccaa tgttacttca aactgcgaag
     5581 gaaacttaag tcttatttca ataataaacc tcaatgaaat aaatttttca atttagaata
     5641 tatcattcaa aattttccaa accaaatgct ttgtttcaaa tttgttacgt agatcacatt
     5701 tttaggaaga gataaatgca agcggtcaaa acaggtcgct tttttgcaaa aatttgaata
     5761 aaaatgaccg cttgtgagat gaaaaccaat aaaaaagcgg tgatttctca ccgctaaaca
     5821 ctcaaaaaag aaatgtactc gttattataa ggttgggaaa ttaaatgccg cttggctacg
     5881 caccgagctg tccggccaac gggttgtgat ggttttcata cgggtgtaga aacgcacgcc
     5941 gtctgtgccg tacacattga gaggcccgaa aatagaggct ttccaaccgc caaagcagtg
     6001 gaacgccatt ggcacaggaa ttggaatatt cacgcccacc ataccggctt gtacatcttg
     6061 ggtgaattga cgtgctgaat cgccatctgc ggtgaaaatt gcactaccat tgccgtattg
     6121 gtgactgtta atgagtgcga tcccttcggc ataatctttc acacgcacaa cagagagaac
     6181 cggtccgaag atttcatctt gccagatggt catttcaggt gtcacgttat caaacagcgt
     6241 acctccgaca aagtaaccgt tttcaaaccc ttcgacttta tagcctcgac catcgacaca
     6301 gagtttcgcc ccctgtgcca ccccttgatc gatatagctc tcaattttgg ctttatgctc
     6361 tttggaaatc accggcccca tatcattttc aagcacgcct tgtggtagta agcctgaacc
     6421 gattttcaat gctttgacct taggaattag ctcttcaatg attttatcgg ctaattcatc
     6481 accaacaact accgctaccg atagtgccat acaacgttca ccggctgcac caaatgctgc
     6541 gcccagtaag gcattaattg tgccttgtac atcagcatcc ggcataatca aagcgtggtt
     6601 tttcgcaccg cccaaggctt gaacccgttt gccgtttgct gagcctttct cataaatata
     6661 ttgtgcaatt gcagttgagc cgacaaaact caccgcctga atgcgagagt cggttaaaag
     6721 aatatctacc gcttctttat caccttgcac cacattgaat acaccgtccg gcaagccggc
     6781 ttcttttaat aattctgcca agcgaataga cacacttggg tctttttcag acggttttaa
     6841 aacgaaagtg ttaccgcaag caagtgccac tgggaacatc cacatcggta ccattgccgg
     6901 gaaattgaac ggggtaatgc ctgccactac gcccaacggt tgctggattg agtgaatatc
     6961 aatgccacgc cctgcattgg cggagaactc acctttttgt aagtgtggaa taccagtggc
     7021 aaattccacc acttctaaac cacgggttaa ttcgccaatc gcatcggaat agattttgcc
     7081 gtgttctgag ctgattaaac gagccaactc atcaaagttt gcttccaata actctttgaa
     7141 tttaaataaa attctggcac ggcgtagtgg tgattgttgt gaccagcttt tgaaagcctg
     7201 atcggccgct gcaattgccg catcgacttc gtttggcagg cttaatttga cttttttggt
     7261 ctcttcaccg gttgcgggat taaataccga ggtaacacgc tggctttggc tttcaacgac
     7321 tgcaccgtta ataaaatttt ggacaaattg gctcattgga ggctccttat caactgattg
     7381 agaggaaaaa cggataaaat acagccgata aactaccgct aaaaatggaa aatatcaata
     7441 cataatacta aaaaatgaaa attttatttc atttttgtga tctaagtagc aagtttacag
     7501 attgccggta ttaaaatgag acaaaatttc gtatagtttg aaagcgtatt ccatttcgtt
     7561 aagcgaggtt tcctatgtct agtccattat tgtctaaacc caatttcaac caacatgaag
     7621 ggttaattca gcacattacc cctgaaaatg cacagtggga atatgttgga tttgatgttt
     7681 atcagctcag taagcaacaa attacgctgg aaagtggtga aaatgaactt tgtctagtct
     7741 ttgtgaccgg ttttggctct gtctatgttg atgattatgc ttttgaaaat atcggcaacc
     7801 gtaccacgcc atttgaaaaa attccgcctt atgcggtcta tatcccgcca cacaaaagcg
     7861 tgttggttaa aaccgaactc aatttagaat tggcagtgtg caaagcacca agtcagggta
     7921 attatccggt gcgtttgatt agcccgaacc atatcggtgt ggaaaaacgg ggctttggca
     7981 acaatcaacg cttggtgcat aatattctgc cggaaaccga agcagccgac agtttgctgg
     8041 tggtggaagt ctttaccgat gaaggcaata ccagttccta cccaagccac aagcacgatg
     8101 acaaacactc taccgaagaa acctatttgg aagagaccta ctaccaccgc ttcgatccac
     8161 cacaaggttt tgcaatgcaa cgggtttata ccgatgatcg cacacttgat gaatgtatgg
     8221 cggtgtatga taaaaatgtg gttaaagtgc ctcgtggcta ccaccctgtt gctaccattg
     8281 ccggctataa caactactac ctaaatgtta tggcagggcc ggtacgcaaa tggaaattta
     8341 cttgggaaca agatcatctt tgggtgaaca gtgaaaccta taaagccaaa tttgagtaat
     8401 gcaagcggtc tttttccacc aattttttac aaaataaggg attaaaaatg ggacgctttt
     8461 ggcgtcccat tcggttatac tttcatacaa agatatttta tttctaaaaa ctcttcaata
     8521 ccgtacttcg aaccttcccg cccaagtcca gactctttcc agccgccgaa cggagcgatt
     8581 tcgttactga tgatcccctc attaatcccg acaatgccat attccaactg ctccgatact
     8641 cgccaaattc gcccgatatt ttggctgaat aagtaagccg ccaaaccaaa ctcagtatca
     8701 ttcgcccact ggataacctc ttcttcggtt tcaaatttga aaatcggggc aaggggagca
     8761 aaggtttcct cacgagccac tttcatcgct tgagtgacat ttttcagaat ggttggctgg
     8821 aagaatgtgc cacccagtgc gtggcgttca ccgcctaaca ccagttctgc cccaagtgaa
     8881 agggcatcgt taatgtggct ttcgactttt tccaccgctc gttcactaat tagtgcacct
     8941 atcgtgacct cttcctcaaa tggcgagcca agcttgattt gagccacttt ctcactcaat
     9001 tttgcaagaa attgctcata aatgcccgct tgcacataaa ttcggttagc acagacgcag
     9061 gtttgcccac cgttacggaa tttagaggca aacacgccct caaccgctgt atctagatcc
     9121 gcatcatcaa acacaatcgc cggtgcatta ccgcctagct ccaatgccaa tttttttacc
     9181 gtccctgccg attgttgcat taaaattttg ccgacacggg tggagccggt aaaggtgagt
     9241 ttgcgtacgg tcggattagt gctcaactcc cgccctacac cttcgacatc gctactggta
     9301 ataatgttaa ataccccttt gggaatacct gcttgatccg ctaattgggc taatgctaag
     9361 gcagaaagcg gggtttctgc cgccggttta atcacaatcg cacaacctgc cgctaacgcc
     9421 ggtgccgctt tacgggtaat cattgcattt gggaaattcc acggtgtaat tgctgccacc
     9481 acgccaatgg gttgtttagt cacaaacaag cggcgaccgg ctttatcttg tggcaagaca
     9541 tcgccataaa tccgcttgct ttcttcggca aaccactcga taaaactggc tccataggca
     9601 atctcgcctc gactttctgc caatggttta ccctgttcta gacttaaaat ctgggcgagt
     9661 tcttcttggt tttgcataat cagctcaaac catttacgca aaatcacgga acgctctttg
     9721 ggcaataatg cctgccattt tttctgggca actgcggctg cttcaatcgc ttgagcggtt
     9781 tcttccgtgc ctaaatcagc cacctcaccg attttctcac cattagtcgg attctgtacc
     9841 gtaaaggttt tcccattttg gcttgaaaca aatttaccgt taatataggc ttggaaacgg
     9901 agtagcaaaa atttgtgatt tggcataatc actccttgaa tggttaaaaa gagaacaata
     9961 ttgactataa tccaatttca gtaaagagaa aagagctgaa aaataacttt ttactcaata
    10021 ataaagcacc ttagacaagc gttcttctaa ggtgcagcca tttattattg agaattaact
    10081 taaattctct acatatttaa taattaagat acaatcattg gagcccatac gaatccaaaa
    10141 gcaagcccaa cagcaacccc aactaaagct ggaagcataa acggatgatc tataatatat
    10201 ttgccagcac gagttgaacc cgtagtatct aattccatcg ctgctaatga agttgggtag
    10261 gttggcagga taaaaatgcc tgtaattgca atgaaagaag ccaaaattgc ccagttaggg
    10321 atccccaagc ttactgctaa tggaataata agagcagaag ttgacccttg tgaataaagt
    10381 aatgcacaag taaaaaagag tactacagct aacaacattg gatattcagt taaaatattt
    10441 ccaatagagg ctttaatttc tattaaatgt gcatcgacaa aagtcatacc taatgtaaca
    10501 atcccgataa ttaccgcaat agaagtcatt cctgagcgga aaattggact agccacaatc
    10561 gtatcaggtt taatttttcc taccaacatc attaagcacg aagaggctaa catcatcaca
    10621 ataattatat ctcgggtact cattgacttc ccattttcat atactggctt taaccctgga
    10681 acggctgcaa gtagaacaac caatacagtt gctagtaaga aaatgccaat cgatagtttt
    10741 gctccttttg aataggtaga ttcactcgct aacttacgag atgggctgac gattcctgct
    10801 tttaaacgtt ctaaataaac aacatcattt tgcaattcac agccctgctt agaagcaaca
    10861 aatgcagcaa ccatagaggc aataaaagaa acaggtaagc atactgctat tacttgaaaa
    10921 aatgtaacac tgttgttttc cattactgct atcatagccg ccattgcagc actcaatgga
    10981 gaacctgcaa tagctaattg agaagacaca accgagccgg ctaatgctct tgaagggcga
    11041 ataccactct cttttgccac ttctgcaatc acaggtaagg tggaaaagac gataaaacct
    11101 gtaccagcca taatcgtcat taaccaagta atcatcggtg caataaagtt aatatattta
    11161 ggatttttac gcatcaatac ttccgcataa cgaacaagta aatccatacc tcctactgct
    11221 tgtaacacag cagcacctat tacaacagtc ataataatca gcattacatc aactggaata
    11281 gaacccatag gtaaaccaaa acctagagtt agaatcgcaa gccctaaacc accatatagt
    11341 cctattccta agcccccaga acgcagtcct aaatagattg cagcaagtac cacaaagatt
    11401 tctgcataaa tcatatccat ctccttaaat taatgagttt gataccaatc aattgctttt
    11461 ttaaccaata ccaacgttga atctacataa cgcattggct cacgctctat ttcttgagct
    11521 aaaataatag gtacttctgt acaacctaaa ataattactt ctgcacctaa acgaatgagt
    11581 tcatcacgtt gttgtaacat tagctctgtg gctttctcta actcacctga ttttaataaa
    11641 tagatactat ccattactgc cttttgacca ttttctgtcg ggcaaataaa agtcagtcct
    11701 tgtgcttcaa gctgtttttt gtataggtct accgccaaag ttgcatcagt tgccaacaat
    11761 ccaacccgcc attttccaca cttcaaaacc tcatcaacca cacaatcaat catacttagc
    11821 atctctacct gacttttggc cttcaagtgt tcaaaccaat aatgtgcagt attacatgca
    11881 ataatgatgc aggttgcccc tgcactctca agcccttcaa tatatttttc cattaccgga
    11941 gccggattct ctccatttgc taaaatatag cgagttctat ctggtatgtc gggaatagag
    12001 gaaatcaata atggaatatg agcttgatca caatcagctg gtgttaagcg gataaatttt
    12061 tggaacatat ctgctgttgc tgcaggtccc attccaccta aaatgccaat aatatttctt
    12121 gccatacact tctccttata agatttaatt tactgcgatg acttatacaa acaagttatg
    12181 caaaaaagaa atgcaataaa tcgaatcagt atgcaaaaaa tgcaacaaag ctctttatag
    12241 atagaaaaaa aatctttaaa atcaataaaa tactaatata tcaaatataa atttaatgca
    12301 tttaatgaaa tcataatgcg aaatttgcat tggttaggat atgaaaaaca tagaaacaaa
    12361 atggttagaa gatttcttaa cgctagaaga atgtcgccat ttttctcagg cagcagaaaa
    12421 aagaaatttg tcacaatctg catttagcag acgtatttta gctttagaag aagttgtggg
    12481 agtgaagtta tttgatcgta cctctattcc attacaactc acagaacaag gtaagctatt
    12541 tcattcacaa acgcgaaact tattacaaca attacagaat aatctagatg aattattagg
//
LOCUS       DANLXO010000083        12218 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.083, whole genome shotgun sequence.
ACCESSION   DANLXO010000083 DANLXO010000000
VERSION     DANLXO010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12218
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.083"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            63..275
                     /locus_tag="PXD69_001953"
     CDS             63..275
                     /locus_tag="PXD69_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284118.1"
                     /translation="MTNKKIQKAIELVGTQTKLAEACGVSQPTVLKWLNGGGISAEYL
                     LKIEAATNGQVTIREICEELGNATAK"
     gene            complement(374..619)
                     /locus_tag="PXD69_001954"
     CDS             complement(374..619)
                     /locus_tag="PXD69_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284119.1"
                     /translation="MNTEDQIIELTVEVENLRHQLNAKNIILDDLKGRLTDYQRKRLD
                     RLFERSRRQYLNDLDLEEEQAEALEAICNELESFLAN"
     gene            752..1024
                     /locus_tag="PXD69_001955"
     CDS             752..1024
                     /locus_tag="PXD69_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284120.1"
                     /translation="MNLDHTCTNCKSKNLRVRTSEKIGLLTIQAVTYCNNCGTEQLVQ
                     SQIIRVRTPIYKERPEAMRINKCLMEADLNTPDLFDGVVADQPKQD"
     gene            1107..1439
                     /locus_tag="PXD69_001956"
     CDS             1107..1439
                     /locus_tag="PXD69_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284121.1"
                     /translation="MSKQLYYRHKSRWNRLNRLKKMNKRRLNLFLQEKRVANLESRLA
                     DEVELAKLNSEQIGDLLQALELKVNRLIRQNEKLKARVIKLEKVKQTQKQGLFAMFKK
                     VLGSKGNP"
     gene            1452..1745
                     /locus_tag="PXD69_001957"
     CDS             1452..1745
                     /locus_tag="PXD69_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284122.1"
                     /translation="MDFVATYQKIRINTNHKQFTCNHLGEIWGKENDDFKRFLLRVAF
                     LQDNPEPKPWGAYSPQEKRLLHSFSLWLEQIADFQRVMKRESKLREKHINAPD"
     gene            1897..2139
                     /locus_tag="PXD69_001958"
     CDS             1897..2139
                     /locus_tag="PXD69_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284123.1"
                     /translation="MSLITVNDYKIKKDILDADGKPCYQLYQGEELLRDTTNLSEIIA
                     YMFIRAEDKPFDELYNHIINQEAGAKTDIKFTVTVR"
     gene            2136..2468
                     /locus_tag="PXD69_001959"
     CDS             2136..2468
                     /locus_tag="PXD69_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284124.1"
                     /translation="MSQITKSAYTHIHPNWQAPRGNTYRIERYELKRRYALFCNGERV
                     VLYKDPTHPNKNVESHIESDVLLLWLLKNELGWSGNIKEPLSPQDVENIRLLEQAFCL
                     TYNGTFIK"
     gene            2465..4831
                     /locus_tag="PXD69_001960"
     CDS             2465..4831
                     /locus_tag="PXD69_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HDL6284125.1"
                     /translation="MNYQNEILSATEAFAIGVSLPPVAGASACALELHSDRLYQAFKQ
                     PYTSMVQQELFSKDPIHEPLRQSYFERLPRALAEHFGRQYKQKLHYQSQYDTADWFKA
                     EMARKMPRIEAVISQYCDVFDFLKQSHQDLDFLAELDSNVYFGAGVDTQQAVQKIKQD
                     AEVKGIQLPMHLCRLENSSRYLKAHGIRPLAYQTEEQIKQLALGIAYRVRQIQQDNIE
                     QNMHKATDGDTAYSVLLECYRAMMGEVNKLKIDSPYQKKARKGRLTEEEITTGFLKMT
                     CEKWWTRKLSKIAEQMKEHLAIACGMVNMLSPYCSNARLKAFEAQRKANIDYLKSMII
                     ANIAEPEEQLSLFETWLKSASNPKIKRLELLTRMNGFERYADKQGHEGWFITLTAPSK
                     YHAMLSRTSSVNPKWNGASPAETQVYLVNTWAKIRAKLNREGVMAYGFRVAEPHADAT
                     PHWHLILFTRPEDMEKLRRVFLSYALEVDGTEAGAKKYRCKFKRIEKEKGSATGYLVK
                     YVSKNIDGFGMDGELSDEANIQAKENAARVGAWSSVWCIRQFQQLGNIPISLWRELRR
                     LGSVEQEDETLEKLRVIADSGEWDVFTEELGGALVKRADLVARITYTERKSETGEALY
                     TMYQEPSLKVSGIINIKNGVQINTRPKEWSIQLKPKNWEEQQLQKKLENATETERAEV
                     KRKYYEKLGFNEEAIALLGELAPPWTWTCVSNCTGSKNNQISEEARNCLRNELITMRG
                     RVTEHQIDDLLNGKRLKIWGNSQKTMFVSYSRGRLIEHIVDNYESFLN"
     gene            4844..5176
                     /locus_tag="PXD69_001961"
     CDS             4844..5176
                     /locus_tag="PXD69_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284126.1"
                     /translation="MVKFIRLNLINYFIEKDEYGEPVRCRAFRYDEIIQTKFIEGFRE
                     GEIPADDYGFEDWNGSVLILNEEGRKYFENYLFDVKKNYCRARDNYVYVLETLDEIEM
                     KLGLLEAK"
     gene            5176..5628
                     /gene="ssb"
                     /locus_tag="PXD69_001962"
     CDS             5176..5628
                     /gene="ssb"
                     /locus_tag="PXD69_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL6284127.1"
                     /translation="MNLVTLVGRLGQDPDIRTMQNGEKAAALSVATSEKWTDKQTGVK
                     KESTEWHRVVLYRRLAEIAELYVKKGHLVSIIGKIKTRKWTDSNGVERSITEIIAEQM
                     QMLSSGEKNTPNTPNKAENKPQPKQKNQDVMTADEQKDIPQFDDDIPF"
     gene            5639..5971
                     /locus_tag="PXD69_001963"
     CDS             5639..5971
                     /locus_tag="PXD69_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284128.1"
                     /translation="MREWEKQMPFSANLHIRPTGKFEVKNVNIEQIIGERGKNYGNFD
                     DVATMSQQLKAVLLDTNTQLKPHQKEAGEMICLKLARIFAGCNPDYEDNWRDIAGYAV
                     LGGKLNEK"
     gene            5961..6230
                     /locus_tag="PXD69_001964"
     CDS             5961..6230
                     /locus_tag="PXD69_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284129.1"
                     /translation="MKNKMGSKFIRVRVEHPQRKKEDIELVQDVVAYHIFNLFKFEES
                     GLRGFSQYDLEIDVKVKPVLEQKEMPVDVWIDDLGGKNGTITSGQ"
     gene            6205..6495
                     /locus_tag="PXD69_001965"
     CDS             6205..6495
                     /locus_tag="PXD69_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284130.1"
                     /translation="MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAY
                     FGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK"
     gene            complement(6765..6947)
                     /locus_tag="PXD69_001966"
     CDS             complement(6765..6947)
                     /locus_tag="PXD69_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HDL6284131.1"
                     /translation="MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQ
                     NQLIIQAIQQFKQNNP"
     gene            complement(7225..8223)
                     /locus_tag="PXD69_001967"
     CDS             complement(7225..8223)
                     /locus_tag="PXD69_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL6284132.1"
                     /translation="MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQID
                     AGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHL
                     RQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYS
                     DEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTA
                     FLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANL
                     HNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ"
     gene            complement(8451..8527)
                     /locus_tag="PXD69_001968"
     tRNA            complement(8451..8527)
                     /locus_tag="PXD69_001968"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8491..8493),aa:Val,seq:gac)
     gene            complement(8591..9391)
                     /gene="apaH"
                     /locus_tag="PXD69_001969"
     CDS             complement(8591..9391)
                     /gene="apaH"
                     /locus_tag="PXD69_001969"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HDL6284133.1"
                     /translation="MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGED
                     SLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQP
                     LVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWS
                     EDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKN
                     IIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK"
     gene            complement(9483..11459)
                     /locus_tag="PXD69_001970"
     CDS             complement(9483..11459)
                     /locus_tag="PXD69_001970"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HDL6284134.1"
                     /translation="MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYF
                     IPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVD
                     HPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAP
                     WWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIK
                     QNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCS
                     LVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQ
                     SEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQ
                     MIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELA
                     ERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYA
                     TWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYA
                     RYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELA
                     LYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII"
     gene            11619..11897
                     /locus_tag="PXD69_001971"
     CDS             11619..11897
                     /locus_tag="PXD69_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000738492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL6284135.1"
                     /translation="MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQ
                     KQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN"
     gene            11922..12218
                     /locus_tag="PXD69_001972"
     CDS             11922..12218
                     /locus_tag="PXD69_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL6284136.1"
                     /translation="MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFF
                     IGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK"
BASE COUNT         3672 a         2155 c         2791 g         3600 t
ORIGIN      
        1 ttattgattt tttatttctt tggttatatt attataacca ttcaataacc agagttatat
       61 ttatgactaa taagaaaatt cagaaagcta ttgaacttgt aggaacacaa acaaaattag
      121 ctgaagcttg tggagttagt cagcctacgg tcttgaaatg gctaaacgga ggcggaattt
      181 ccgctgaata tctactaaaa atcgaagctg ccacaaacgg gcaggtaaca attcgtgaaa
      241 tttgtgagga gttgggaaat gcaacagcaa aataaaagcc ctgaacaggc agggctagcg
      301 agtgggaaat ttactgtaag acgtaatcaa gacggtaaat ggcgtttaga tttgaccttg
      361 ttggattttg gtattagttc gccagaaacg actcaagctc gttgcaaatt gcttcaagag
      421 cttcagcttg ctcttcttca aggtcaaggt catttaaata ctgtcggcgt gaacgttcga
      481 aaagccggtc cagtcgtttg cgttggtagt ctgttaagcg accttttaaa tcatcaagaa
      541 taatgttttt ggcgtttagt tgatggcgta agttttcaac ttcaacagtc agttcaataa
      601 tttgatcttc agtattcata aaatttcctt ttggagggtt aaacaatatc taaaacataa
      661 ccaaaattcg actgcttgtc tatggggata gataagccga aatcaacgta aagaatgtta
      721 atagagcctt ggggaaggcg taggggaaat aatgaattta gaccacacct gtacaaattg
      781 caaaagtaaa aatttacggg ttcgtacatc tgaaaaaatc ggtttgctga ctattcaggc
      841 tgttacttat tgtaataact gcggcacaga gcaacttgtg caaagtcaaa ttatccgtgt
      901 tcgcacaccg atttataaag agcgaccgga agcaatgcgt attaataaat gcttgatgga
      961 agccgatttg aacacgccgg atttgttcga tggcgttgtg gcagaccaac ctaagcaaga
     1021 ctaatcccaa tttttaaaca atcgtcaaaa taagccttat ttgcataggg cgagattttt
     1081 gcaccctaaa ttcaggaatt tgaacaatga gtaagcaatt atattaccga cacaaatcac
     1141 gttggaacag acttaaccgc cttaagaaga tgaataaacg tcgccttaat ctgtttttgc
     1201 aagaaaagcg ggtggcgaat ttagaaagcc ggttagctga tgaagtagag ctggcaaagc
     1261 tgaatagtga gcagattggc gatttactgc aagcgttgga gttaaaagtg aatcggttaa
     1321 ttcgccaaaa tgaaaagctg aaagcccgtg tgattaagct ggaaaaagtc aaacagaccc
     1381 aaaagcaagg tttgtttgca atgtttaaaa aggtgttggg tagcaagggt aatccttagt
     1441 aagaggtaga tatggatttc gtggcaacgt atcaaaagat acgcattaac actaatcaca
     1501 agcaatttac ttgcaatcac ttaggcgaga tttgggggaa ggaaaacgac gattttaaac
     1561 gtttcttact acgagtcgca ttcttgcagg ataaccccga gccgaaacct tggggagcgt
     1621 attccccaca agaaaaacgc cttttacata gttttagctt gtggttagag cagatagcag
     1681 attttcagcg agtaatgaaa agagaatcaa aactgcgtga aaaacatatt aacgcaccgg
     1741 attagaagga gtaaatatga gccgtaaccg tgaattgtgt gagttttttc acaaactgtg
     1801 gtgcaaaacc ggtaatcgct atgcttatcg ccggtatcaa gtgttttttc agcgttatca
     1861 aaacgaatgt ttagtgaatg agtagagggt agaaaaatgt cattaattac tgtgaacgat
     1921 tacaaaatca agaaagatat tttagatgca gacggcaagc cgtgttatca gttgtatcaa
     1981 ggcgaagagc tattgcgtga taccaccaat ttaagcgaaa tcatcgctta tatgtttatt
     2041 cgtgccgaag ataaaccgtt tgatgagttg tataaccata tcatcaacca agaagcagga
     2101 gctaaaacag atattaaatt tacggtaacg gtgagatgag ccagattact aaatccgctt
     2161 acacacatat tcacccaaac tggcaagccc cgagaggtaa cacttaccgg attgagcgat
     2221 atgagctaaa acggcggtat gccttatttt gtaatggtga gagggtagtt ttatataaag
     2281 acccaacaca ccccaataag aacgtagaga gccatataga aagtgatgtt ttgttgttat
     2341 ggctactgaa aaatgaatta gggtggagcg gtaatattaa agagccgtta agccctcaag
     2401 atgttgagaa tatccgcttg ttagagcaag cattttgttt aacttataac ggaactttca
     2461 ttaaatgaat tatcagaatg agattctatc tgctacagag gctttcgcaa taggtgtttc
     2521 actcccacct gttgccggtg cttctgcttg tgcattagag cttcattctg atcgtttata
     2581 tcaagcgttc aaacagcctt acacttcaat ggtccagcaa gaattattct cgaaagaccc
     2641 tattcacgaa ccgttacgcc aatcttattt tgagcgtttg cctcgtgcct tagcagagca
     2701 tttcggcaga cagtataagc aaaagctaca ttaccaaagc caatacgaca cagcagactg
     2761 gttcaaagcg gaaatggcac gcaaaatgcc acgcattgag gcagttatta gccagtattg
     2821 cgatgtattc gattttctga agcaatccca tcaagattta gattttttag ctgaattaga
     2881 tagtaatgtt tatttcggtg ccggtgttga tacgcaacaa gcggtacaaa aaattaaaca
     2941 agatgccgaa gtgaaaggta ttcaactgcc tatgcacctt tgccgtttag agaatagctc
     3001 tcgctattta aaagctcacg gcattcgccc gcttgcttac caaaccgaag agcaaatcaa
     3061 acagcttgcc ttaggtattg cttatcgtgt tcgccaaatt cagcaagata acatcgagca
     3121 gaatatgcac aaagcgacag atggcgacac agcctatagt gtgttgcttg aatgctatcg
     3181 ggcaatgatg ggagaggtaa ataagctcaa gattgattcg ccttatcaga aaaaagcgag
     3241 aaagggtaga ttaactgaag aggaaattac cacaggcttt ttaaaaatga cctgtgaaaa
     3301 atggtggact agaaagttat ctaaaattgc cgaacagatg aaagagcatt tagctattgc
     3361 gtgcggtatg gtgaatatgc tttcgcctta ctgttcaaat gctcgcttga aagcgtttga
     3421 ggctcaacgc aaggcgaata ttgattattt gaaatcaatg atcattgcca atatcgccga
     3481 gccggaagag caactttcat tatttgaaac gtggttgaag tctgcctcta acccgaaaat
     3541 taaacgcctt gaattactca ctcgtatgaa tggatttgag cgttatgcag ataagcaagg
     3601 gcacgagggg tggtttatta ccttgactgc tccgtctaag tatcacgcaa tgctttcaag
     3661 aaccagtagc gtgaacccga aatggaatgg agcaagccct gcggaaacac aggtttacct
     3721 tgtgaatact tgggcgaaaa tccgtgccaa actcaaccgt gagggcgtaa tggcttacgg
     3781 ttttcgagtg gctgaacctc acgctgacgc taccccacac tggcatttaa ttctattcac
     3841 tcgtccggaa gatatggaaa agcttcgccg cgtgttcttg agttatgcct tagaggtcga
     3901 tggcacagaa gccggtgcga aaaaataccg ttgcaaattc aagcgtattg agaaagagaa
     3961 aggctcggca acgggctatt tagtgaaata tgtttctaaa aacattgacg gttttggaat
     4021 ggacggcgag ctttcagacg aggcaaatat tcaggcgaaa gagaatgccg ctcgtgtagg
     4081 agcgtggtct agcgtttggt gtattcgaca gttccagcag ttaggtaata ttccgatcag
     4141 cttatggcgt gagttacgcc gtttggggag tgtagagcaa gaagatgaaa ctttagagaa
     4201 actccgtgtg attgcagata gcggtgagtg ggacgttttc accgaagaat taggcggtgc
     4261 gttggttaaa cgtgccgatt tagttgcacg tattacttat accgaacgca aaagcgaaac
     4321 cggtgaggcg ttatatacga tgtatcaaga gccatcatta aaagtgagcg gcattattaa
     4381 cattaaaaac ggtgtgcaga ttaatacacg cccgaaagag tggagcattc aacttaaacc
     4441 taaaaactgg gaggagcaac aattacagaa aaaattagaa aatgcaaccg aaacggaacg
     4501 agcggaggtt aaacgtaaat actacgagaa gttagggttt aacgaagagg ctatcgcttt
     4561 attaggggag cttgctcccc cttggacttg gacttgtgtc agtaactgta cggggtcaaa
     4621 aaataatcag attagtgaag aggctcgaaa ttgcctaaga aatgaactga ttacaatgcg
     4681 aggacgggtt actgaacatc aaatagacga tttactaaac ggcaagcggt taaaaatttg
     4741 gggaaattcg caaaaaacaa tgtttgtgag ttatagccgt gggcgtttaa ttgagcatat
     4801 tgttgataat tatgagagtt ttttgaatta ggatattaag aaaatggtta aatttattcg
     4861 tttaaatttg attaattatt tcattgagaa agatgaatat ggagaaccgg tgcgttgcag
     4921 agcgtttcgt tatgatgaga ttattcaaac taagtttatt gaaggatttc gagagggaga
     4981 gataccagct gatgattatg gatttgaaga ttggaatggt tcggttctga ttttaaatga
     5041 agaaggacgt aaatattttg agaactatct ttttgatgta aagaagaatt attgtagagc
     5101 aagggataac tatgtatatg tcttggaaac tttagacgaa attgaaatga agttaggatt
     5161 attggaggcg aaataatgaa cttagtcaca ttagtcggac gtttggggca agaccctgat
     5221 attagaacaa tgcaaaatgg tgagaaagct gcggctttat cggtagcgac ctctgaaaag
     5281 tggacagata agcaaacagg tgtgaagaaa gaaagcaccg aatggcatag ggtggtgctt
     5341 tatcgccgat tagctgaaat cgccgaattg tatgtaaaaa aagggcattt ggtatcaatt
     5401 atcgggaaaa ttaaaacccg aaaatggacg gatagcaacg gtgttgagcg gagtattaca
     5461 gagattattg ccgagcagat gcaaatgctc agtagtggtg agaaaaatac gccaaatacg
     5521 ccaaataagg cagaaaataa accgcaacca aagcagaaaa atcaagacgt gatgactgcg
     5581 gacgagcaga aagatattcc gcagtttgat gatgatattc cgttttaggg ggtgaataat
     5641 gagagaatgg gaaaaacaaa tgccatttag tgcaaattta catataagac ctacaggaaa
     5701 atttgaagtg aaaaatgtaa acatagaaca aataatcgga gaacgtggca aaaattacgg
     5761 caactttgat gatgttgcca caatgagcca gcagttaaaa gcagtgttgc tggataccaa
     5821 tactcaactt aaaccacatc aaaaagaggc aggcgagatg atctgcttga aactggctcg
     5881 catttttgca ggttgtaatc cggactatga agataactgg cgagatattg cgggttatgc
     5941 ggtgctggga gggaaattaa atgaaaaata aaatggggag taaatttata cgagtcagag
     6001 ttgagcatcc acagcggaaa aaagaagata ttgagcttgt gcaggatgtg gttgcttatc
     6061 atatttttaa tctttttaaa tttgaggaaa gtgggttacg ggggtttagt cagtatgatt
     6121 tggaaattga tgtgaaagtt aagccagtgt tagaacaaaa agaaatgcct gtagatgttt
     6181 ggattgatga tttaggtggt aaaaatggaa caattacaag cggtcagtaa tgagcaagtt
     6241 tttgcaaaac tttgtgaggt tgagcggtta ttaaaaacca aaggggtgaa tgagcatagc
     6301 cgtgaattgt gggatttggg cgatgtagca gcatatttcg gctacactaa agaacacacc
     6361 agccgaagtg ttgtatctag tccacatttt ccgaaaccga ttgcccttga cggcttacga
     6421 ggcaagggca ggggggcgaa gaagtgggta tccggtgaag tggtgaaatt ttgtttgatg
     6481 tggaaggtga agtgatgata aaaaagataa ttttagatgc ttgttgcggt agccgaatgt
     6541 ttcactttaa taagcacaac ccctcggtat tgtttgctga caatcgggaa tccctgtatc
     6601 gaaaatttta aatgttatcg aataccaacc tatctatggg cataaaagcg gtaaacataa
     6661 caaaacgcat tggctggcat ttgtaaagat ggataataac gattatttgt aaagtatttc
     6721 aaaatacaaa agccgataaa tttcattatt tatcggcttt tgttttatgg gttgttttgc
     6781 ttgaattgtt gaatagcttg aataatcagc tggttttgtg gaatgttgag tttttggcta
     6841 agtacttcga tttctgcgat cacctcaagc ggtagtttaa aggatttttg ctttattcct
     6901 cgttttgcct cgcttttagc ttggatttca tttcttgaca ttgccataat ttatccctat
     6961 tataaatttt gttgaagagc tgggagcttt cacccccagc gagttgcttc agattagtaa
     7021 gctggggagc taaggactaa taagaagaca actaggataa tgtatttaaa cattgtgcta
     7081 tccttcttca tttcgtaagg tttaagcctt acgctcactt tcaagctgtc tcttgaaagt
     7141 gaggttatta taatgtaggg tatcctacat tgcaagtaat aaatacaaaa aagccgataa
     7201 attttcgttt atcggctttt gtttttattg cagtttgctc acaagttctg aaatatccgg
     7261 gttatagtag gtattttgca aaatacttaa atctcgatgc cccgatactt tggcaagctc
     7321 cattaccgtc agatatttag acaaacgtgt gagtgcctct cgccgtgtgt cgtgaaaatg
     7381 cagatcggca ttgtgtagat tggctttttg tttcagcttg cgaaaattcg aatcaaggct
     7441 gcgactggtg agctggaaaa cactgttttg cttgttcggt tcaagttgtg ccaactgatt
     7501 taaaattgct attgctttgg ttgagagtgg cacggtgcgt gaataaccgt ttttggtttg
     7561 tggcaaaaat gcggtgcgtg cctgcaggtt tatatgttcc cattttaaac cagcaatttc
     7621 acccgctcgc attgcagtct caatcgcaaa taatagtgct gctccggctc tttgttgcat
     7681 taatagcggt ggctggttag ggctgtagcc ggagacaaaa atcagtttgt ctatctcctc
     7741 atcgctatat cggcgagttc ttgctggtgg cgttttgatt ttttccagcg tttttagagg
     7801 attttctttg agataatccc attccattgc ttttgtaaag agtgccgata aagtggctct
     7861 ttctcttgag acggaaaccg gctgcacttc ttgcaagcgt tggttttgcc attggcgtaa
     7921 atgctctttg gtgagtgccg gtaatggtat atttcccaag ttgctgccgg caattcttag
     7981 caggcgatag cgttcttccc ttttgccacg tttggtcgga gtgacctctt tgaggtattt
     8041 gtcgattaat tcggcaaaaa gaatgttcgg ggtggtgtta tattctccgg catcaatttg
     8101 agcctctaaa gcgtaagccc agcggtttgc ctctgttttg gtgctgaaag tggcagtttt
     8161 ataaatgcct tttttgcgga cttgtgctcg gtatttgttg ccgttcttaa taatagtagc
     8221 cattttttta ttcctttgtg tatgtgtgca gtttaagtgt gcaaatgtgt gcaaaggaat
     8281 gttaatagag atcataaacg atcaataaat atcaagtttt catatcaaaa atgatgtttt
     8341 tattgatgtt atgctacact tggggaagtg ttttaaatca ataagctatt gatttataag
     8401 gggtattttt ggggttaagc ctgaatgggg atattcaggc ttaaaaataa tggtgcgact
     8461 agctggactc gaaccagtga cccccaccat gtcaaggtgg tgctctaacc aactgagcta
     8521 tagtcgcatt aacggtgtgc attctattgg aaaaaggaac ttagtgcaat atgcttttgg
     8581 tcgaatgctt ttattttaga cgcttttggg taaaaatttg tttatcttcc caacggagca
     8641 tggttaaatg gcttccccaa gcacagccgg tatcaagtgc atagatgttt ggacgagtgc
     8701 atttgcccat taggcttgcc cagtgaccaa agataatgtt tttctgtgta aataacggat
     8761 tatctaagtc aaaccaagcc agcagttctt gaggggcttg ttcaagcggt aatttacagt
     8821 caaaatctaa ccgcttgtcg gtgtagcaaa accgcatacg ggtaaacaca ttgatgatat
     8881 aacgccaacg ttcaacacct tgcaaatctt cactccagcg ttcgggctta ttctcataca
     8941 tttgggcgat gtagtccgca taattgtcac tttgtagcac cttttctgcc tctttggcac
     9001 aagctagggt agttgctaaa tcccactcag ggctgattcc tgcgtgagtc agcaaaaatt
     9061 gatgtttggg gtgatgaatt acaagcggtt gatttctgag ccaattttgc aaatcgagcc
     9121 gatctttagc ctcaaaaata gcatcaatct tatcatttgg ttttacccgt ttgatgccaa
     9181 gcaagtgcaa atcgtggttg cctagcacgg ttttggcatt gtttgcagag tctttcacaa
     9241 aacgtaaaca ggctaaagag tcctcaccac gggcgactaa atcccctgtt aaaaagagtt
     9301 cgtcttgctt ggggttataa ttgacttttt ctaataaaag ctgaaattcg ttaaagcaac
     9361 cgtgtaggtc gcctacaata taagttgcca ttgtttctcc tttgttcccc taaagttata
     9421 aacaagcggt tatattttag agaaaatttg caaaatctca tcaaaatata accgcttgaa
     9481 atttaaatga tatttcctac gattgagcgg gtttctaagc gtacttcggt gagtttcact
     9541 ttcaccgctt gcccgatctg ataggctttt tcacctttaa tataaagtgc aagttcttct
     9601 tggcggtatt ccatttcctc tttgttgtcg tgcaagctgg agaatggcac aaaaatttga
     9661 gcaccgtttt ttatgacttt cgcacgcaag ccaccacggg aaacatctgc aatttcgcac
     9721 tcaaattcga ccgcttgttc caccattggg gcaaggtaac gagcataaag ccagtcagca
     9781 atatcacgtt ctactaaacg gttttgacgg cgagcttctt gtaaacggct taaaactgat
     9841 tcttccaccg cttggctttg tttgccaagt aacacttgct tgattaaacg gtggtttacc
     9901 atatcgccat atttacggat gggtgatgtc caagtggcgt aatcggtaat gcctagtccg
     9961 aaatgcgggg caacttcggc tttaaattca gcgaaggtta aataacgtcg taaacgcaac
    10021 tctaagaatt tctctgggta gtcttgaata tcacgttgca tttggcaata gccttctaag
    10081 gttgctaaac gctcggcgga gtagcgttcg gcaagctcat cacgattttc atcgctggct
    10141 aaagtttgga gtaaaaatga ttttaccaat tcataatttt tcggatcaaa acctgaatgg
    10201 gtattaaata caccggtttt ggcatgttgg cttaagaatt ttgcacaaca aatattggca
    10261 agaatcattg attcttcgat catttgattc gcaatacggc gatattcaac gtgaatatct
    10321 tttaccgagc catcttcatt taactcaaag gtataatcgc cttgttcttt gaatagcaac
    10381 gcattctcgg cacgccattg aatgcgggct tgagtaaatt gatgtagcca ctcaatttgt
    10441 tgttttgttt cttcagactg aggttgccac gcattttcca cgccttcgag ataatcggaa
    10501 acatcgtcgt aagccaagcg atcttttgat tcgacccaag cagaggtaaa ggttgtctct
    10561 ttaatgagat tgccgtttaa atcggtttca ataaagccaa cgagggcagg gcgtttttca
    10621 ttcgggacaa gcgaacagag atcgtctgag agttctcgag gtaacattgg aatgttaaag
    10681 cccggcaaat agttggtgaa acaacgctgg cgagcggctt tttcaatatg ggaattttct
    10741 gggatataag cggttgggtc agcaatcgct accactaaac gccagccggt tcgcttgcca
    10801 ttttgcttaa ttggttcgat gaacagagca tcgtccatat cttgcgtgct tgggctgtca
    10861 atagtggtaa agtaaagatg agataaatct tcacgagcta attcatcgtg taattcatag
    10921 tttttttcat ttgcgaccgg ttcacgaggc tgttcgtggc gggcaagtgt gacccaccaa
    10981 ggggcaaaat tatcagattc tttacagata aattgggtaa cttgagcaaa gaaaaaacgg
    11041 tcgtcacgca atgggtgcgt ttttaattgt gcaaccaccc agtcgccatt ttctaatttt
    11101 tcagtggctt ttttatgggt atttgccggg atagtttgct taatgcttgg gtgatcaacc
    11161 gcaagttgca atttgccctc tttattcaag cgaacttggg caataaatct atccagcatt
    11221 ggctcaagta gtgaatcaat ttctacctgt tctttgtcgc catcacgttt gactacggct
    11281 ttcactgaat caccgtgcat tacttttttc atttccgcag gtggaataaa atagcttttt
    11341 ttatcgcatt ctaaaaaacc gaatgctttg tctgaggctt tgacaacgcc tgcgacatat
    11401 tctttgcttg cttcaatttg ttgtttgagt tgggctaaaa ggggattgtt ttgaaacata
    11461 atttctcatt ttaaaaataa aaaaaggtgc tatcgttgca ccgaaaaaaa caatggcatt
    11521 ataacggatt tgaaccaagt tcagcaaata aatgctgttg ctataactta taaaggttgg
    11581 tagaatataa tccatttaaa aataatggag acttttcaat gaaaaaatta cttgcaattg
    11641 caacagtatt ttctttagca gcctgttcta ctcaaacact tgaactatct cctgctaagg
    11701 aagctcaata tgatcgtgtt caacacttct ttgtttcagg gcttgctcaa aaacaagaga
    11761 tagatgcagc aaaaatttgt aatggtgcag ataaggtagg taaggtagaa actgaaacta
    11821 ctttctttaa tggcttgtta ggtacaatta cttatggtat ctattcacct cgccaaatcc
    11881 gtgtatattg taactaatcc tagtaattta aggagttgaa aatgaaaaaa ttgcttgcta
    11941 tgtctgtatt aacagccctg ctgactacag catgtacaac acaaactgcc catattggcg
    12001 gcaaagttac tgataatatt aaaccaacta agagtgtaac tcagtcgttc tttataggtg
    12061 ggattgggca agaagaaaca ttgaatgttg tagaggtttg tggttccaaa gataaagtgc
    12121 agcaggttga aacagtactt tcaggtgggg acattctatt aggtcttgtg actatcggta
    12181 tttatacacc tcgtactgca aatgtatatt gtaagtaa
//
LOCUS       DANLXO010000084        12079 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.084, whole genome shotgun sequence.
ACCESSION   DANLXO010000084 DANLXO010000000
VERSION     DANLXO010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12079
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.084"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            21..779
                     /locus_tag="PXD69_001973"
     CDS             21..779
                     /locus_tag="PXD69_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL6284137.1"
                     /translation="MIPLERQREILRLINNNGVASINFLAEQLKVSHMTIRRDIQKLE
                     EQGKVSLVSGGVQSLERLIMELPHDDKSMLFQEQKSAIGSLASQLIPSNTTIYLDAGT
                     TTLEIAHRIIDRNDLLVVTNDFVIAHYLSNSGKCDLIHIGGSVCKENLSTTGSLAAEF
                     LKNLSIDMAFISTSSWNLKGLTTPNENKIPVKKAILEASKQNILVTDSSKYGKVATFF
                     VCPLTVFDQIICDKGLFENVRDALKGLSIKLDLG"
     gene            complement(919..2310)
                     /gene="ffh"
                     /locus_tag="PXD69_001974"
     CDS             complement(919..2310)
                     /gene="ffh"
                     /locus_tag="PXD69_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDL6284138.1"
                     /translation="MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVA
                     LPVVRDFINKVKERALGVEVNKSLTPGQEFLKIVQSELETAMGEANEELNLAAQPPAV
                     ILMAGLQGAGKTTSVGKLAKFLKERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFF
                     PTETSQKPVAIAEAALKHAKLNFFDVLIVDTAGRLHVDGEMMEEIQQIHAVLNPIETL
                     FTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVG
                     EKTDALEPFHPDRVASRILGMGDVMSLIEDIQRSVDQEKAEKIAAKFKKGDEFTLEDF
                     REQLIEMKKMGGMMSMLDKLPGAKNLPDHVKSQVDDKMFMKMEAIINSMTLKERANPD
                     IIKGSRRRRIALGSGTQVQDVNKLLKQFDDMQRMMKKMRKGGMAKMMRGVKGMMGGGL
                     GGLGGLGSMFGKR"
     gene            complement(2646..2721)
                     /locus_tag="PXD69_001975"
     tRNA            complement(2646..2721)
                     /locus_tag="PXD69_001975"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2686..2688),aa:Asn,seq:gtt)
     gene            complement(2727..2802)
                     /locus_tag="PXD69_001976"
     tRNA            complement(2727..2802)
                     /locus_tag="PXD69_001976"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2767..2769),aa:Phe,seq:gaa)
     gene            complement(2973..3048)
                     /locus_tag="PXD69_001977"
     tRNA            complement(2973..3048)
                     /locus_tag="PXD69_001977"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3013..3015),aa:Asn,seq:gtt)
     gene            complement(3054..3129)
                     /locus_tag="PXD69_001978"
     tRNA            complement(3054..3129)
                     /locus_tag="PXD69_001978"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3094..3096),aa:Phe,seq:gaa)
     gene            complement(3261..4352)
                     /gene="mltC"
                     /locus_tag="PXD69_001979"
     CDS             complement(3261..4352)
                     /gene="mltC"
                     /locus_tag="PXD69_001979"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HDL6284139.1"
                     /translation="MKKYAKYLPMLAIIPFLIACGSNKSTKKPKSTRVDYSKDTNGLD
                     ILAGQFSHNIDDIWGSNELLVASKKDYVKYTDKFYTRSHISFEEGVITIETLGNQNHL
                     RNSIIHTLLMGRDPKGIDLFASGDAPISSNPFLNGQVEDQFGRNITNVAIANDFATYL
                     LQNKVQTRRLKNGQTVSFVTIKMVAGHIEVRARQYLPLVRKMAKQYGIEPSLILGIME
                     VESAFNPYAISYANAIGLMQVVPRTAGRDIFARKGMGGQPSREYLYNPSNNIDAGTLY
                     LTILRDEYLDGIEDPVAKRYAMISAYNSGAGAVLRVFDSDRYSAIDRINDLSSDAVYR
                     ILTTAHPSSQARNYLRKVTTAREKYRNIR"
     gene            complement(4369..4638)
                     /locus_tag="PXD69_001980"
     CDS             complement(4369..4638)
                     /locus_tag="PXD69_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HDL6284140.1"
                     /translation="MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIK
                     KQTMIVNEKKLSMMNPEHRKLLEQEMVNFLFEGKEIIIEGYKPVE"
     gene            complement(4642..5787)
                     /gene="mutY"
                     /locus_tag="PXD69_001981"
     CDS             complement(4642..5787)
                     /gene="mutY"
                     /locus_tag="PXD69_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDL6284141.1"
                     /translation="MNSNSPFPLAKAKASDPFAKAVLAWFEQYGRKHLPWQQNKTLYQ
                     VWLSEVMLQQTQVATVIPYFARFMERFPTVIDLANASIDEVLHLWTGLGYYARARNLH
                     KAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGAILSSVLDAPHPILDGNVKRVLSRY
                     FAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAMMDLGAMICTRTKPKCLLCPLQE
                     NCKTNAMQAWDSFPAKKPKKTLPERQTYFLVLKSGSKVLLQKREAKGIWGGLFVFPQF
                     ESLEALKRSDFMQNLQISQQLTAFRHTFSHFHLDITPVLVETDLKKTSENSPLVVEEK
                     AGNYLSKVSSNADYWYDLHQHNEVGLATPVKRILDELAFSVKNEIKD"
     gene            5871..6263
                     /locus_tag="PXD69_001982"
     CDS             5871..6263
                     /locus_tag="PXD69_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL6284142.1"
                     /translation="MKSPILGFHHIALIVSDYEKSKHFYTRILGAEIIAETYREQRAS
                     YKLDLRFKDGSQIELFSFPETPPRFTSPETCGLRHLAFRVENIEYAIAFLEQHQLPHE
                     GIRIDEITGKRFTFFRDPDDLPLEFYEV"
     gene            6264..7133
                     /locus_tag="PXD69_001983"
     CDS             6264..7133
                     /locus_tag="PXD69_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL6284143.1"
                     /translation="MLYLLIATLIWASSFIVGKVAISAFDPVQIMQIRLTLAAFIALP
                     FFIPAYKKIQKNQHIKVWLISFLTFPLYVILQFSGLKLTSAASAVALLGLNPLLTVLV
                     GYFCFKKQATRLDFILSLFACLGILIMASGSDDSGSINVLGLLLVTLGSLSFIVGMYL
                     SKEILQSVKVIDLTKIMLVQGAITALPITLLFAENWQLPTSLSAWASVAYLGIICTSL
                     AILLWNKGISQSSPILAGILLALEPVFGLLMALVFLSEQLSLVTWVGIIIVICTALLS
                     VLLPMMKRYKRLI"
     gene            7149..7862
                     /gene="sfsA"
                     /locus_tag="PXD69_001984"
     CDS             7149..7862
                     /gene="sfsA"
                     /locus_tag="PXD69_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HDL6284144.1"
                     /translation="MKFPPLSHGILLRRYKRFLADIQLPNGEQITLHCPNTGAMTGCA
                     NPGDTVWFSTSHNPKRKYAHTWELTQTQAGDFICVNTLRANQLVQEALENQWISELAD
                     YQHILPEQKYGSENSRIDFLLKSDLLPDCFVEVKSTTLLTENGVGMFPDAKTERGQKH
                     LRELTKIAEQGLQAVIFFAILHTGIERFEVAKQIDPKYAELFAQAIAQKVQVLSYKMA
                     ISLENGQPIAATLTKKCEF"
     gene            7923..8444
                     /gene="hslV"
                     /locus_tag="PXD69_001985"
     CDS             7923..8444
                     /gene="hslV"
                     /locus_tag="PXD69_001985"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDL6284145.1"
                     /translation="MTTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVV
                     TGFAGSTADAFILRDLFEKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDS
                     EFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDI
                     DIYSNYNHVIEEV"
     gene            8701..10026
                     /gene="hslU"
                     /locus_tag="PXD69_001986"
     CDS             8701..10026
                     /gene="hslU"
                     /locus_tag="PXD69_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HDL6284146.1"
                     /translation="MMSMTPREIVSELDAHIIGQKDAKRAVAIALRNRWRRMQLPEDL
                     RQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LADVSMKLVRQQAVEKNKMRAQDAAEDRILDVLLPPAKDQWGNVQESDNNSTRQTFRK
                     KLREGQLDDKEIEIDVAAQVSVEIMTPPGMEEMTSQLQSLFEGMSPSKTKKRKMKIKD
                     ALKVMLDEEAAKLVNPEELKQQAIEAVEQHGIVFIDEIDKICKKGEHSGGDVSREGVQ
                     RDLLPIIEGSTVNTKHGMVKTDHILFICSGAFQVARPSDLLPELQGRLPIRVELKSLT
                     KEDFERILTEPNASLTLQYRELMKTEGVEIEFTKDGISRIAESAFRVNEKTENIGARR
                     LHTVLERLMDGISFDASERRGEKIIIDENYVSEALNDVVENEDLSRFIL"
     gene            10102..10980
                     /locus_tag="PXD69_001987"
     CDS             10102..10980
                     /locus_tag="PXD69_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HDL6284147.1"
                     /translation="MKNLYKWPAAQSLYPNQGKKSYAGKRFRYRLRSWLHHSKIKQFE
                     QFVTQNPQLIPLLNARPNYSYPVAHRFLDKRFSAKQRLQKITDNLLFLPQKLAHLPPL
                     WEQAVNFGEIIADFELWLNINEHQPMEGFWALELRHRPTNQLVYLLTFGKLDEALLIA
                     VIQGPNFEGSKELVKQLTKSCHGLRPAYLMVETMKALTAVLGYQSLLGIPQKYQNKSR
                     WVQSKRYVVDYDAIFAESGGKPGNYWQLPLELESKKIDEIPSKKRSMYRKRYEMLANL
                     KQTMELMLKTYTGLNG"
     gene            complement(11050..11766)
                     /locus_tag="PXD69_001988"
     CDS             complement(11050..11766)
                     /locus_tag="PXD69_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL6284148.1"
                     /translation="MKKTLLTLLFGCVVTAQAQDIKFVMEPSYPPFEMTEEKGEIIGF
                     DVDIANAICKEMNANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKKQVLFSEPY
                     FPSSAAFIAKKDTDFAKVKTIGVQNGTTYQHYLAKEKKEYNVKSYASYQNAILDVQNG
                     RIDAIFGDVPVLAEMARKHEGLDFVGEKINNPNYFGDGLGIATHLKNQVLVDQFNAAL
                     KTIKENGEYQKIYDKWMGGK"
BASE COUNT         3600 a         2555 c         2409 g         3515 t
ORIGIN      
        1 caattaaaat aggttaaaaa atgatcccct tagagagaca acgagaaata ctacgactta
       61 ttaataataa tggtgtcgca agtattaatt ttctggcaga acagctaaaa gtatcacata
      121 tgacaattcg ccgtgatatt caaaagctgg aagagcaagg taaggtatcc ctagtatctg
      181 gtggagttca atctcttgaa cgattaatca tggaattacc acacgatgat aaatcaatgt
      241 tattccaaga gcagaaatca gctataggat ctttagcatc acagctaatt ccctcaaaca
      301 caactattta tcttgatgct ggaactacta cattagaaat agctcatcgg ataatcgata
      361 gaaatgactt actagttgta acaaacgatt ttgttattgc tcactatctt agtaattcag
      421 gaaaatgtga tttaattcat ataggaggaa gtgtctgtaa agaaaaccta tcgacaactg
      481 gttcacttgc agcagaattt ctgaaaaacc tatcaatcga tatggcattt atatctactt
      541 catcctggaa tttaaaaggt ctaacaacgc cgaacgaaaa taaaatcccc gttaaaaaag
      601 caattttaga ggcatccaag caaaacattt tagtgacaga ctcttcaaaa tatggaaaag
      661 tcgcaacttt ttttgtttgc cctcttactg tatttgacca gattatttgt gataaaggat
      721 tatttgagaa tgtacgagac gcactgaaag ggctaagtat taaattagat ttaggataat
      781 cttcttacca attttttctg agaacgacaa gcaatcaaaa agtattattt ttgcaaataa
      841 gatattaata gggaaagtta acaatcctag caacggattg ttaactgatt ttcggctggt
      901 actaataaaa taggaatatt aacgtttacc aaacatactg cctaagccac cgagaccgcc
      961 tagaccacca cccatcatac ctttaacacc acgcatcatt tttgccattc cgcctttacg
     1021 catttttttc atcatacgtt gcatatcatc aaactgcttg agcagcttat ttacatcttg
     1081 cacctgtgtg ccggagccaa gtgcgatacg gcggcggcgt gagcctttaa taatatccgg
     1141 atttgcccgc tcttttaagg tcatagaatt gatgatggct tccattttca tgaacatttt
     1201 atcatcaacc tgacttttaa cgtggtcagg caggtttttc gcccccggta gtttatcgag
     1261 catcgacatc attccaccca tttttttcat ttcgataagc tgctcacgga aatcttccaa
     1321 ggtaaattca tcgccttttt tgaatttggc ggcaattttt tccgcttttt cttgatcaac
     1381 cgagcgttga atatcttcaa ttaaagacat tacatcgccc atacctaaaa tgcgggaagc
     1441 cacacggtca gggtggaacg gctcaagggc atcagttttt tcacccacac ctaagaattt
     1501 aatcggttta ccggtgattt ggcgaataga aagtgccgca ccgcctcggg catcgccatc
     1561 gactttggta agaataacac cggtaagcgg caacgcttcg ttaaaggctt ttgcggtgtt
     1621 ggcggcgtct tgaccggtca tcgcatcaac cgtaaatagc gtttcaatcg gattcagcac
     1681 agcgtggatt tgttggatct cttccatcat ttcgccatca acgtgtaaac gaccggcagt
     1741 atccacaatc aatacatcaa agaaattaag cttagcgtgc ttcagtgccg cttctgcaat
     1801 cgctaccggt ttttggctgg tttcggtcgg gaagaagtcc acttttaacg cttcagcaag
     1861 ggtctgtagc tgcttgatag cggcagggcg gtaaacatcg gcagaaacta ccaacacctt
     1921 tttcttgtgg cgttctttca ggaattttgc caatttgccg acagaggtgg ttttacccgc
     1981 accttgcaaa cctgccatta aaattaccgc aggcggttgg gccgcaagat tcagctcctc
     2041 gttggcttct cccattgccg tttctaattc gctttgtacg atttttaaga actcttgccc
     2101 cggcgtgagg cttttgttta cctcaacccc taacgcacgc tctttgacct tgttgatgaa
     2161 atcacgcaca acagggaggg caacatccgc ctccaacaat gccatacgaa cttcacgcag
     2221 ggtatcttta atattatctt ccgttaggcg acctttgccc gtaatgttac gcagcgtttt
     2281 agacagtctg tcagagaggt tttcaaacat atcagctttc tcaatttgca aaattttagg
     2341 aaaaaagtac cgcttgtgag cggaaagttg ccgccattat acaaaaaaaa gcgttacggt
     2401 tatagggaaa taaaaaaacg gcatagcgat taaactatgc cgtaaaattt gacgatattc
     2461 gaggaatcat tatttagtta tattgtgcga tcataatact ccgaattgcg tataaaagtg
     2521 aagtgatatt ttcaaattta tgttagaaat gagaggtaaa ttacaaaatt aaaggggata
     2581 ttattgtttg aaaaaataag agcgaaaaga aaaccctgat gattgctcat cagggcttcg
     2641 gaatatggct cctcctgcgg gactcgaacc tgcgacatat ggattaacag tccaccgttc
     2701 taccgactga actaaggagg aattgatggt gcctcgaggc ggaatcgaac caccgacacg
     2761 gggattttca atcccctgct ctaccgactg agctatcgag gcaacgtcgt tgcgtggtgc
     2821 attatgctga ttttttcggg cttcgtcaaa tacaattctc aaaaatttag cgtttttgaa
     2881 cgcataatac taaaaattga gcaatttctt agtagttagc cggaaagctc aaaaagaaaa
     2941 ccctgatgat tactcatcag ggcttcagaa tatggctcct cctgcgggac tcgaacctgc
     3001 gacatatgga ttaacagtcc accgttctac cgactgaact aaggaggaat tgatggtgcc
     3061 tcgaggcgga atcgaaccac cgacacgggg attttcaatc ccctgctcta ccgactgagc
     3121 tatcgaggca acgtcgttgc gtggtgcatt atgctgattt cagcttgcaa cgtcaaacgt
     3181 ttttttgcaa atttaaaaaa accgctgctc aaatgtgctt tttttatact tttcggctaa
     3241 aaaacagcat aattcacaca ttaacgaata ttgcgatatt tctctctggc ggtggttact
     3301 tttcttaaat aatttctagc ttgagaagat ggatgagcag tggttaaaat tcgataaacc
     3361 gcatcagacg aaagatcgtt aattctatca atcgcagagt atcggtctga atcaaacact
     3421 cgtaataccg cacctgctcc gctattgtat gcagaaatca ttgcatagcg tttagccaca
     3481 ggatcttcaa ttccatctaa gtattcatca cgcaaaatag tcaaataaag cgtacctgca
     3541 tcaatgttat ttgatggatt ataaagatat tcacgacttg gctgccctcc cataccttta
     3601 cgggcaaaaa tatcacgccc ggcggtacga ggtacaacct gcattaagcc aatcgcattg
     3661 gcatagctga tggcataagg gttgaatgct gattcgactt ccataatccc taaaatcaaa
     3721 cttggctcaa taccatactg cttcgccatt ttacgcacca gcggtaaata ttgtctggca
     3781 cgtacttcaa tgtgtcctgc caccatttta atcgttacaa agctcacagt ttgaccattt
     3841 ttcaaacggc gtgtttgcac cttattttgc aacaaataag tcgcaaaatc attggcgatg
     3901 gcaacattgg taatatttcg cccgaattga tcttcaacct gtccgtttag gaaagggtta
     3961 gagctaatcg gtgcatcgcc tgaggcaaat aaatcaatcc ctttcgggtc tctgcccatt
     4021 aataaagtat gaataatcga attgcgtaga tgattctgat tccctaaagt ctcaatcgta
     4081 atcacccctt cttcaaacga aatatggcta cgggtgtaaa acttatccgt atatttcaca
     4141 taatctttct tactggcaac taacagctcg ttacttcccc aaatatcatc aatattgtga
     4201 gaaaactgcc ctgccaaaat atccaaacca ttggtatctt tagaataatc tactcgggta
     4261 gattttggct tcttagtcga tttattgctc ccacaagcaa taagaaacgg aataattgcc
     4321 aacatcggca aatatttagc atattttttc attgtgattt aacctttatt attcgaccgg
     4381 cttatagcct tcgatgatga tctctttacc ttcaaataaa aaattgacca tctcttgttc
     4441 gagcagttta cggtgttcgg ggttcatcat actgagtttt ttctcattga cgatcattgt
     4501 ctgtttttta atccactcag accacgcttg cttgctgatt gagtcaaaaa tacgcttacc
     4561 cagctccccc ggataaagtt gaaaatctaa accttctgcc tcttgtttta aatattcgca
     4621 aaatacggta cgagccataa tttaatcctt aatctcattt ttcacactga atgccagctc
     4681 atctaaaata cgtttaaccg gcgttgctaa acccacttcg ttatgttggt gcaaatcata
     4741 ccaataatcc gcatttgaag ataccttaga aagataattt cctgcttttt cttcgacaac
     4801 aagcggtgaa ttttcacttg tttttttcaa atcggtttct actaaaaccg gggtaatatc
     4861 caaatgaaaa tggctaaaag tatgcctaaa tgcagttaat tgctgtgaaa tttgcaaatt
     4921 ttgcataaaa tcagaccgct tgagagcctc taagctctca aattgcggaa acacaaataa
     4981 gcccccccaa atgccttttg cttcccgttt ttgtaacagc actttcgagc cgcttttcag
     5041 cactaaaaaa taggtttgac gctccggcaa ggtttttttc ggtttcttgg caggaaagct
     5101 atcccacgct tgcattgcat tcgttttaca attttcttgt agcgggcaga gcaagcactt
     5161 aggctttgta cgggtgcaaa tcatcgcccc taaatccatc atcgcttggt taaagtctgc
     5221 cacttgggta tcaggcgtca cactttcgct taattgccaa aggcgatttt ccaccgcttt
     5281 ttcacccgcc cagccttcta ctgcaaaata gcggcttaac acccgtttga cattgccatc
     5341 taaaatcggg tgtggggcat ctaacacaga agacaaaatc gcccctgcag tacttctgcc
     5401 cactccggtt aatgccaaca catcatcaaa tcgggtagga aattcaccgc caaactcatc
     5461 tcgaatttga attgccgctt tatgcaaatt tcttgcccga gcgtaataac ccagccctgt
     5521 ccacaaatgc aatacttcat caatcgaggc attagctaag tcaattacgg tgggaaatcg
     5581 ttccataaaa cgtgcaaaat aaggaataac ggtcgctact tgagtttgtt gcaacattac
     5641 ctccgacaac caaacctgat acagcgtttt attttgctgc caaggtaaat gtttccgccc
     5701 atattgctca aaccaagcta aaacagcttt ggcaaacgga tcagaagctt ttgctttcgc
     5761 taaaggaaat ggggaattgc tgttcattaa aaatcttgaa atccgaaaaa taaattatca
     5821 tactgcaagc ggtcagtttt accaaaaatt ttacacatta aggaaaaaag atgaaatcgc
     5881 ccattttagg tttccaccac attgcattaa ttgtttccga ttacgaaaaa tccaaacatt
     5941 tctacacccg cattttaggg gcagagatca tcgcagaaac ctaccgagag caacgtgcca
     6001 gctataaatt agatttacgc tttaaagatg gctcacaaat tgaattattc agttttcctg
     6061 aaacgccgcc tcgtttcacc tcgcccgaaa cctgcgggct tcgccatttg gcatttcgag
     6121 tggaaaatat tgaatatgcc atcgcatttt tagaacaaca tcaattaccg catgaaggga
     6181 tccgaattga tgagatcacc ggcaaacgct tcacgttttt ccgagatccg gacgatctgc
     6241 cgttagagtt ttacgaggtc taaatgttat atttactgat tgcaaccctg atttgggcga
     6301 gttcattcat tgtaggtaaa gtggcgattt cagcctttga ccctgtccaa attatgcaaa
     6361 ttcggctgac gttagcggcg tttatcgctc tgccgttttt tattcctgcg tataaaaaaa
     6421 tccagaaaaa tcagcacatt aaagtctggc tgattagttt tctcactttt cctctgtacg
     6481 tgatcttaca attttccggc ttgaaattaa cttccgcagc aagtgccgtg gcactactcg
     6541 ggctaaaccc gcttttaact gtgttagtcg gctatttttg tttcaaaaaa caggcaacca
     6601 ggctcgattt tatcctaagt ttatttgcct gcttggggat tttaattatg gcatcgggta
     6661 gcgatgatag cggttcaatc aatgtattag gattattgct tgtaacctta ggcagtttaa
     6721 gttttattgt gggaatgtac ctcagcaaag agattctgca atcagtaaaa gtgatcgatt
     6781 taaccaagat catgctggtg caaggggcaa ttaccgcctt acctattacc ttactctttg
     6841 cagaaaattg gcaactgcca accagtctct cagcatgggc gagcgtagca tatttaggca
     6901 ttatttgtac cagcttggca atattgttat ggaacaaagg catcagccaa tcttcgccta
     6961 ttcttgcagg tattctactc gcacttgaac cggtattcgg actgctaatg gcattggtct
     7021 ttttatcaga acagctcagt ttagtgactt gggttgggat tattattgtt atttgcaccg
     7081 ccttactctc cgttttgcta ccgatgatga aaagatacaa gcggttaatt taacaggatt
     7141 ttttgcaaat gaaatttccc cctctttccc acggcatttt acttcgccgt tataaacgtt
     7201 ttcttgccga tattcagttg ccaaatggcg aacaaattac cctccattgc ccaaataccg
     7261 gtgcgatgac aggctgtgcc aaccccggtg atacagtttg gttttccacc tctcataacc
     7321 ccaaacgtaa atatgctcac acttgggaac taacccaaac ccaagcgggg gattttattt
     7381 gtgtcaatac cttgagagcc aatcagcttg tacaagaagc cttggaaaat caatggatta
     7441 gcgagcttgc ggattatcag cacattctgc ctgaacaaaa atatggcagt gaaaacagtc
     7501 ggattgattt tttgctcaaa tcggaccttc tgccggattg ttttgtggaa gtgaaatcta
     7561 ccaccctttt aaccgaaaac ggtgtgggaa tgttccccga tgccaaaacc gagcgggggc
     7621 aaaaacattt gcgggagctg acgaaaatcg ctgaacaggg cttacaagcg gtcatttttt
     7681 tcgctatttt gcacacaggt attgaacggt ttgaagtggc aaagcagata gaccccaaat
     7741 atgccgaatt attcgctcaa gccattgcac aaaaagtgca ggttctctcc tataaaatgg
     7801 caatttcatt ggaaaacggg caacctattg cggcaacctt aacaaagaaa tgtgagtttt
     7861 aagcttgaaa acacacagca tatccccata taagccaaag tttttaaaaa gaaggattta
     7921 gtatgacaac gattgtatgc gtgcgtaaag acggaaaagt ggctatcggt ggtgatggtc
     7981 aggcaacgct tggaaattgt atcgagaaag gcacggtgcg gaaagttcgc cgtttgtata
     8041 aagacaaagt ggtgacaggc tttgccggct cgaccgctga tgcctttatt ttgcgtgatt
     8101 tattcgagaa aaaattggag ttacaccaag ggcatttagt gaaatcggca gtggaactgg
     8161 caaaagagtg gcgtaccgag cgtgctttac gccgtttaga agcgatgatg attgtcgcca
     8221 atgacagcga gtttttattg gtttcaggtt cgggcgatgt gattgagccg gagcaagatg
     8281 tgctggcgat tggttcaggc ggtaactatg cgaaagccgc tgctcttgcg ttattacgca
     8341 ccgaaaataa tttatctgca aaagaaatcg ttgcggaagc gttaaaaatc gccggcgata
     8401 ttgatattta cagtaactac aatcacgtga ttgaagaagt ttagttaaat aactctctcc
     8461 ccttgtggga caaatgttta catttgaacg ttggctttgc caacggctcc acaggagcga
     8521 gcgtagcgag tattgagacc gaaaaatatt tcgttcagaa atatttttca gagagagggg
     8581 ttaatgcaaa acgtttaaga aaaaagaccg cttgttaccc tctccctgat ttttcttctg
     8641 aacaaagaaa aatctgtccc tctcccacaa ggggagaggg taattaattt aaggaataac
     8701 attatgtcaa tgacaccccg tgaaatcgtc tcagaattag acgcacacat tatcggacaa
     8761 aaagatgcaa aacgtgcggt agcaattgct ttgcgtaacc gctggagaag aatgcagttg
     8821 ccggaagatc tccgccaaga agtgaccccc aaaaatattt taatgatcgg tccgaccggt
     8881 gtgggtaaaa ccgaaatcgc ccgccgtttg gcgaagcttg ccaatgcccc ttttatcaaa
     8941 gttgaggcaa ccaaattcac tgaagtgggg tatgtgggta aagaagtgga ttcgattatc
     9001 cgtgatctag ctgatgtgtc gatgaaatta gtccgccaac aagcggtcga aaaaaataaa
     9061 atgcgtgcac aagatgcagc ggaagatcgc attttagacg tattattgcc accggcgaaa
     9121 gatcagtggg gaaatgtgca ggaatccgac aataattcta cccgccaaac tttccgcaaa
     9181 aaattgcgtg aagggcaatt agacgataaa gagattgaaa ttgacgtggc agctcaagtg
     9241 agcgttgaga ttatgacccc gccgggaatg gaagagatga cctcgcaatt acaatcgctg
     9301 tttgagggaa tgtcgccaag caaaaccaaa aaacgcaaaa tgaaaatcaa agatgcgtta
     9361 aaggtgatgc ttgatgaaga agcggcgaaa ttagtaaatc ctgaagagct gaaacagcaa
     9421 gcgattgaag cggtggaaca gcacggtatt gtctttattg atgagatcga caaaatctgt
     9481 aaaaaaggcg agcattcggg tggagatgtt tctcgtgaag gtgttcagcg tgatttactt
     9541 ccaatcattg aaggctcaac ggtaaatacc aagcatggta tggtgaaaac cgaccatatt
     9601 ctgtttatct gctcgggggc attccaagtg gctcgcccgt ctgatttact cccagaatta
     9661 cagggtcgct tgccgattcg tgtggagtta aaatcgctta ccaaagaaga ttttgagcgt
     9721 attttaaccg aaccgaatgc ctcattaacc ttgcaatatc gtgagttgat gaaaactgaa
     9781 ggcgtggaga ttgagttcac taaagacggt atcagccgta ttgcagaaag tgcattccgt
     9841 gtgaacgaga aaaccgaaaa catcggggca agacgtttac acaccgtgct tgagcgtttg
     9901 atggacggca tttcgttcga tgccagcgaa cgccgtggtg aaaaaatcat cattgatgaa
     9961 aactatgttt ccgaagcgtt aaatgacgtg gtggaaaacg aagatttaag tcgctttatt
    10021 ttgtagtttt aagttataca agcggttatt ttagcgaaaa atcttgcgaa ttagccgctt
    10081 ttcatattgt tagttgtaaa aatgaaaaat ctatacaaat ggcctgctgc acaatcgctt
    10141 tatccaaatc agggaaagaa gtcttacgca gggaaacgtt ttcgttaccg tcttcgctct
    10201 tggttgcatc attccaaaat caagcaattt gagcagttcg ttacacaaaa tccacaactg
    10261 attccgctct taaatgctcg accaaattac agctaccccg tggctcaccg ctttttagat
    10321 aagcgtttca gtgcaaaaca acgcttacaa aaaatcacag ataacctgct gtttttaccg
    10381 caaaaattgg ctcatttacc acctctatgg gaacaagcgg tcaattttgg tgaaattatt
    10441 gcagattttg agttatggct taacatcaat gaacatcagc cgatggaagg tttttgggca
    10501 ttagaacttc gccacagacc gactaatcag ctagtttatt tattaacatt tggtaagtta
    10561 gatgaagcct tgttgatagc cgtaattcaa ggtccgaatt ttgaaggttc aaaagagctg
    10621 gtgaaacaat taaccaaaag ttgccacggc ttacgcccgg cctatttaat ggttgaaacg
    10681 atgaaggctt taacggctgt tcttggctat cagagtttac taggcattcc acagaaatac
    10741 cagaataaat cccgctgggt gcaaagtaag cgctatgtag tggattatga tgctattttt
    10801 gcggaatcgg gcggaaagcc gggaaattat tggcagttac cccttgaatt ggaaagtaaa
    10861 aaaatagatg aaattccaag caaaaaacgc tcaatgtatc gcaagcgtta tgaaatgcta
    10921 gctaatttaa agcagaccat ggagcttatg cttaaaactt atactggctt aaatgggtaa
    10981 atcaaagaat acaagcggtc aaaatctgca aaactttgca aaactttgca aaaaatgacc
    11041 gcttacaagt tacttgccgc ccatccattt atcatagatt ttttgatatt cgccattctc
    11101 tttaatcgtt tttaatgctg cattgaattg atcaactaat acttggtttt tcaagtgagt
    11161 tgcaatgcct aaaccatcac caaaatagtt tggattattg attttctccc ctacaaaatc
    11221 tagcccttcg tgttttcttg ccatctcagc caataccggc acatcgccaa aaatagcatc
    11281 aattcgccca ttttgcacat ctaaaatagc attttgataa gaggcataag atttcacatt
    11341 gtactctttt ttctcttttg ctaaatagtg ttggtaagta gtcccatttt gcacaccaat
    11401 cgttttcacc ttagcaaaat ctgtatcttt tttcgcaatg aaggcagcag agcttggaaa
    11461 gtaaggctcg ctaaataata cttgtttctt acgtggttcc gtaataccca tacctgaaat
    11521 tgcagcatca aattgttttt gttttaggct ttggattaag ctatcaaaag gttggctatg
    11581 gaatgtacaa tttgcattca tctctttaca gatagcattt gcaatatcca catcaaaacc
    11641 gataatttct cccttctctt cggtcatttc aaatggagga tagcttggct ccatcacaaa
    11701 tttgatatct tgtgcctgcg cagtaaccac acacccgaat aaaagggtca aaagtgtttt
    11761 tttcataaaa agtccctgtg ttttcattat aaggattacc actttaacgc agttactttc
    11821 ttaaaaaaag tcttcttttc ataaagtttg ttttatgtca tacaaacaca tcaaattgag
    11881 atgtagtttc tcaatcctct tgattcctct atctcaaaaa aacaacccaa aagaaaaaag
    11941 aaaagtatat gttacattaa tattacaatg taattatttt gtttaatttc cctacatttt
    12001 gtataacttt aaaacactcc tttttctctt ctgattatat aaaagacaaa aaatacaatt
    12061 taagctacaa aaaacaaca
//
LOCUS       DANLXO010000085        12027 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.085, whole genome shotgun sequence.
ACCESSION   DANLXO010000085 DANLXO010000000
VERSION     DANLXO010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12027
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.085"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..687
                     /locus_tag="PXD69_001989"
     CDS             <1..687
                     /locus_tag="PXD69_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6284149.1"
                     /translation="HLITLFEDKNFISLDFFAGSSSFPHAILESNRIDKGNRKFIAVQ
                     YPEEIDIKSKNGKVAKQFCQRKNLPLYITEISKERIRRAGKQILQNNPENRPLDVGFK
                     VFKLTESHFKQWQSPTSENLADQLEMFIDPVSEKADTQAVLYELLLRLGLKLTAKVRL
                     ENKVFWVEENGLIFALLLNAADEEIIQTVIAQQPKKVIALDRLFNGNDARKKNTELQM
                     QDAGITFFVI"
     gene            697..3333
                     /locus_tag="PXD69_001990"
     CDS             697..3333
                     /locus_tag="PXD69_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL6284150.1"
                     /translation="MELQFETLEYQLQAVNATVNLFVGQPNAATEFSLKAQNDMRFVP
                     NLGLQISDEQLQQNLANLQNRQKIDRTLLVEQGKNFTVEMETGTGKTYVYLRTIFELN
                     RQYGWQKFVIVVPSVAIREGVLHTLETTKSHFNTVFDNPSVNQKFEYKSNQTSRLKSF
                     ASANHIEILVMNIDAFTKESNVINTVNESGDAPIFYIQQANPIVIIDEPQNMETEIRR
                     NAIESLSPLFTLRYSATHKNAYNPIFSLNPVQAYEMGLVKQIEVDSVLAENEVNGAYL
                     SLKEIKTGAKSWSAKIEILFNDKKAMKKKVISVKPNQDLYELSNQNEMYRSGFILSGM
                     DTDSQMVSFSNGTQIFQGAEHSQLKEDVQKMQIRRTIGEHLQKEKKLRPLGIKVLSLF
                     FIDKVDNYRPSAQSPTGGKFAKWFEEIYLELAKEEPQGVHNGYFSQDKKGVAKDTNGT
                     TQADNETYQLIMRDKEKLLSLENPLRFIFSHSALKEGWDNPNVFQICTLNDTASEMKK
                     RQEIGRGLRLPVNQQGLRIYDRHLNTLTIIANESYEQFAATLQREIEEDCGVQFAKSN
                     VKKREDKKAVRYRKDFSLHPEFAAIWERIKHQTTYRVDFSNAELIESAVEKIRKMPDI
                     EATKIKHSKVKLEMNETGISTNYRSSNETAVNTQWAIPDLLSEIQKKTGLTRATLCKI
                     LQKSDRLQEVFRNPQRFIDLIAEKINLALQQIMTDGVEYHKIAGKTYEMTLFGDFDFY
                     LNQYTFEVQDKTKTIYEDYIALDSQTENIFARHCESSEQVEFYFKLPKRFKIPTPLGS
                     YNPDWAVVFKGENKIYLVAETKNTGKGIQAGVDEEKLDESERMKIDYARKHFKGLQRD
                     YKDLDYRVVQKVEELSAEYCKI"
     gene            3465..5897
                     /gene="gyrB"
                     /locus_tag="PXD69_001991"
     CDS             3465..5897
                     /gene="gyrB"
                     /locus_tag="PXD69_001991"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDL6284151.1"
                     /translation="MSEQTQATSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHM
                     VFEVVDNAIDEALAGHCKDIIVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTV
                     LHAGGKFDDNSYKVSGGLHGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLA
                     IIGNTEKTGTSVRFWPSLDIFKNKTEFEYKILSKRLRELSFLNSGVSIKLIDERDGKE
                     EHFKYEGGIKAYVEYLNEGKTHIHNTPFYLTTEKDGIGVEISLQWNDSYNENVYCFTN
                     NIPQRDGGTHLAGFRGALTRALKNYMDNSGVLKKADANIDASGDDAREGLVAVISVKV
                     PDPKFSSQTKDKLVSSEVRGAVESSMNEALSDYLAENPDDAKNIVTKIIDAARAREAA
                     RKAREMTRRKGALDLGGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRDRKNQAI
                     LPLKGKILNVEKARFDKMLSSQEVATLITALGTGIGRDDYNLEKLRYHKIIIMTDADV
                     DGAHIRTLLLTFFYRQMPELIENGYIYIAQPPLYKVKKGKQERYIQDNDEMSQYEIDI
                     ALEGAGLYVSEDAPALSGVALENLIAQYNGVQKLIERLSRRYPTLLLNELIYSKPLSV
                     EFAKNQANMTAWSEQFVATLMAKEVGGSFYRINTLFNEERQIYEPEIIVTTHGMDSTY
                     RLDYNFINGNEYARIVALGNELNDLLSDSAYVVRGERRQEISSFAEALDWLVKESRKG
                     LTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNITDAIAADKLFSTLMGDEVEPRRDF
                     IETNALYAQLDI"
     gene            complement(5950..6912)
                     /gene="cmoB"
                     /locus_tag="PXD69_001992"
     CDS             complement(5950..6912)
                     /gene="cmoB"
                     /locus_tag="PXD69_001992"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005707797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDL6284152.1"
                     /translation="MIDFRPFYQQIATTDLSAWLETLPLQLKQWEKTTHADYAKWAKV
                     ADFLPNSTACINLKDKVESISSKPLSEGEVKQITHHLKQLMPWRKGPYHLHGIHIDTE
                     WRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFE
                     AVRKLLGNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKAQLVRGG
                     ELVLETLVIDGDINDVLVPADRYAKMKNIYFIPSVAALINWLEKVGFKNVRCVDEAIT
                     TLEEQRKTDWLENESLVDFLDPNDHSKTIEGYPAPKRAVILANA"
     gene            complement(7009..8772)
                     /locus_tag="PXD69_001993"
     CDS             complement(7009..8772)
                     /locus_tag="PXD69_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HDL6284153.1"
                     /translation="MSEQTFITGKDAALEDSIATFQHKLKTLGFNIEEASWLNPVPNV
                     WSVHIRDADCPQCFSNGKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFV
                     HYPTEKWFPIDDEAIPPMEMMDEFLWEYFDPNGEITPELLVDLQSGNYDRGIVTLPYV
                     RQSDNETVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLP
                     EIPQSVIDGYPTIKASIEKLEQEDFPILCYDASLGGEFPVICVILLNPNNGTCFASFG
                     AHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANLETHFIDSSGLISWD
                     LFKRDADYPFVHWDFSGTTEQEFNNMMAIFNKHNQPVYIMDYEHLGVYACRILAPGMS
                     NIYPSDDLVYANNNMGMDWREILLDLPHFHHDAETYQELLDELDEQSIDDLTRVREFI
                     GVVAEKGSAMQTLRIGELKSMLHLALGNLEQASDWANWTANMNASVFSAERNNYYRCL
                     IQSIELFLDEERDSEQYRMVFEKMYGKQAVEAAWGAIQGGNPFHGLTASDESLENMTA
                     HQKLLNAYRKVQKAKVNPIAR"
     gene            9036..11324
                     /locus_tag="PXD69_001994"
     CDS             9036..11324
                     /locus_tag="PXD69_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase/endonuclease Cas3"
                     /protein_id="HDL6284154.1"
                     /translation="MEEHTIQSFYAHSGKLSDHSDWQTLLSHANNVGLLAAEFAAPFA
                     SQEIARCTGLLHDLGKYSERYQKRLHGGERVNHSTAGAKIAVERWGPLGKMMAFCIAG
                     HHAGLANGSGEGKNRSTLTQRLQEQFGYGHKDLPVLDAIWQQELNLPEKLPLPPLKPS
                     KNEPFFSYAFFIRMLYSCLVDADFLDTEAFYANLEKRPLERGNYPNLTALHQQFNQFI
                     AQFRERIATQTPNTQEAQRKAEVNRLRSEILDYAVSQAKQETGLFSLTVPTGGGKTFT
                     SMAFALEHAKQYGLCRIIYVIPFTSIIEQNAAEFRKAFGELGTEAVLEHHSTFDHDSL
                     PDKSSRDKLKLASENWDTPVVVTTAVQFFESLFADRSSRCRKLHNIVGSVIILDEAQM
                     LPLNLLRPIMAAIDELARNYQCSVVLCTATQPAIHQANGFYKGFENVREIAPNPTALF
                     EKLKRTTVKHIGIQTDVELQSKLADNPQMLIIVNNRRHARALYDSAKQLEGAYHLTTL
                     MCAKHRSQTLTEIRLRLKQNLPCRVIATSLIEAGVDVDFPLVMRAEAGLDSVAQAAGR
                     CNREGKRLSVESNVWVFQPEEQWKAPPELGLLSGCMRSTVQVHADDLLNPKAINHYFQ
                     AVYEAKGKELDKPNILKACHDAGQSLNFPFQKIAEDFRMITSHLIPVIIPFDQEAENL
                     IDRLRYADQVGGILRKLQPYTVQVPEKALAELYNAGRVETINETNFGKQFYCLIGMDL
                     YDEVAGLSWENVDFLESEKLVL"
     gene            11455..>12027
                     /locus_tag="PXD69_001995"
     CDS             11455..>12027
                     /locus_tag="PXD69_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284155.1"
                     /translation="MREPLLDEDELKKWLQTIFTDNLVIIVGSGLSCAEGLPGMGALA
                     DRLKERMPECLDDIDKVTWNTISDCLDSEGLEGALLKHQANETIEAAIIKITAEYVLS
                     EEQKAINKCIAENQKLKFSYLLPHISASNPKIARVITTNYDRLIEFAAEYENWGIDSM
                     MVGRYWGKHNPDLSRKLQIRDIRVKGKCPKL"
BASE COUNT         3788 a         2299 c         2581 g         3359 t
ORIGIN      
        1 catttaataa ctctatttga agataaaaat tttatttctt tagatttctt tgctggcagt
       61 tcatcatttc cacacgcaat attggaaagt aatagaattg ataagggtaa tagaaaattt
      121 attgcggttc aatatcctga agaaattgat atcaagagta agaatggaaa agtagcaaag
      181 caattttgcc aaagaaaaaa tttaccacta tatataactg aaatttcaaa agaacgtatt
      241 cgccgtgccg gaaagcagat tttgcaaaat aaccccgaaa accgaccgct tgatgtaggt
      301 tttaaagtct tcaaactgac agaaagccat tttaaacaat ggcaatcgcc cacatctgaa
      361 aatttagccg atcaacttga aatgtttatt gatcctgtta gtgaaaaagc ggatacgcaa
      421 gccgttttat atgagctttt attgcgttta gggttaaaac tcacggcaaa agtgcggttg
      481 gaaaataagg tgttttgggt ggaagaaaac gggctgattt tcgccttgct gttaaatgca
      541 gccgacgaag aaattattca aactgttatc gctcaacaac cgaaaaaagt catcgcttta
      601 gaccgtttat tcaacggcaa tgatgcccgg aagaaaaaca ccgaattgca aatgcaagat
      661 gccggcatta cgttttttgt gatttaagga gaaaaaatgg aactccaatt tgaaacctta
      721 gagtatcaat tacaagccgt taatgccaca gtaaatttgt ttgtcggaca gccgaatgcc
      781 gcaactgaat tttcactcaa agcccaaaat gatatgcggt ttgtgccgaa tttaggcttg
      841 cagattagtg atgagcagtt acaacagaat ttggctaatc tgcaaaacag gcaaaaaatc
      901 gaccgcactt tgcttgtcga acagggaaaa aattttaccg tggaaatgga aactggtaca
      961 gggaaaacct atgtctattt acgcacgatt tttgaattaa accgtcaata cggctggcaa
     1021 aaatttgtga ttgtcgtgcc gagtgtggca attcgtgagg gagtgttgca tacgttggaa
     1081 actacaaaaa gccattttaa tacggtattt gataacccga gcgtcaatca aaaatttgaa
     1141 tataaaagta accaaacttc acgcttaaaa tcctttgcta gtgctaatca tattgaaatt
     1201 ttagtgatga atattgatgc tttcaccaaa gaaagtaacg tgattaatac cgtgaatgaa
     1261 agcggtgatg ctccgatttt ctatattcaa caggcgaatc cgattgtgat tattgatgaa
     1321 ccgcaaaata tggaaacgga gattcgccgt aatgcgattg agagtttaag tccgcttttc
     1381 actttgcgtt attctgccac ccataaaaat gcgtataacc cgatttttag cctcaatccg
     1441 gtgcaagcct atgaaatggg attagttaaa caaattgagg tagatagcgt attggcggaa
     1501 aatgaggtaa atggagctta tctttccctc aaagagatta aaacaggggc aaaaagctgg
     1561 tcggcaaaaa tcgaaatttt atttaacgat aaaaaagcga tgaaaaagaa agtgattagc
     1621 gtgaaaccga atcaggattt gtatgagctt tccaaccaaa atgaaatgta tcgttcaggg
     1681 tttatattaa gcggaatgga taccgatagc caaatggtta gcttctccaa cggcacacaa
     1741 atttttcaag gggcggaaca ttcccaactt aaagaagatg tgcaaaaaat gcagattcgc
     1801 cgcactattg gcgagcattt gcaaaaagaa aagaaattac gaccgcttgg gatcaaggtg
     1861 ttgtctttgt tctttatcga taaagtggat aattatcgcc cttctgcaca aagccctacg
     1921 gggggaaaat ttgcaaaatg gtttgaggaa atttatttgg agctagccaa agaagagcct
     1981 caaggcgtgc ataacggtta tttctcacag gataaaaaag gcgtagcaaa agatactaat
     2041 ggcacaacgc aagcggataa cgagacttat caactgatta tgcgggataa agaaaaattg
     2101 ctttcgctgg agaatccgtt acggtttatt ttctcgcatt ctgccttaaa agaaggatgg
     2161 gataatccga atgtgtttca aatttgtact ttaaacgata ctgcaagcga aatgaaaaaa
     2221 cgccaagaga ttgggcgggg cttgcgtttg cctgtgaatc aacaaggatt gcggatttat
     2281 gatcgtcatc taaatacgct gacaattatc gcaaatgaaa gttacgaaca atttgccgcc
     2341 acattacagc gtgaaattga ggaagattgt ggtgtacagt ttgccaaaag caatgttaaa
     2401 aaacgggaag ataaaaaagc cgttcgctac cgtaaagatt tcagcttaca tccggaattt
     2461 gcggcaattt gggaacggat taaacaccaa accacttatc gggtagattt cagtaatgcg
     2521 gaattgattg aaagtgcggt ggaaaaaatc cgcaaaatgc ccgatatcga ggcgacaaaa
     2581 attaagcatt ccaaagtgaa attggaaatg aatgaaacag ggatttcaac taattatcgc
     2641 tcatctaatg aaacagcggt aaatacacaa tgggcgatac ctgatttatt gagtgagatt
     2701 caaaagaaaa ccgggctgac gcgtgcgacc ctttgcaaaa ttttacaaaa atccgaccgc
     2761 ttgcaagaag tcttccgcaa tcctcaacgc tttattgatt taattgcaga gaaaatcaac
     2821 cttgctttac aacaaattat gacagacggg gtggaatatc acaaaattgc cggaaaaacc
     2881 tatgaaatga cgttattcgg cgattttgat ttttacctca atcaatatac ttttgaagtt
     2941 caagataaaa caaaaacgat ttatgaagac tatattgcac tggattccca aacagaaaat
     3001 atcttcgccc gacattgtga atctagtgag caagtggagt tttattttaa attacccaaa
     3061 cgttttaaaa ttccaacgcc attaggcagc tataatcccg attgggcagt tgtgtttaag
     3121 ggagaaaata aaatttactt ggttgccgaa acgaaaaata caggcaaagg tattcaagca
     3181 ggagtagatg aagaaaaatt agatgaaagt gaacgaatga aaatcgacta tgcccgtaag
     3241 catttcaaag gcttacagag agattataag gatttggatt atagggttgt acagaaagtg
     3301 gaggagctgt ctgcggagta ttgtaaaatt taatctgtgg tcttgtagaa ttgagataga
     3361 ctgcaatttc aactaaaatt taaccgcttg ttttgcgata cttttacgca tttttctgct
     3421 ataatcggca caattttttc gatttcaaat tagtaggaat aagaatgtct gaacaaactc
     3481 aagcaacaag ttatgattct tccagtatta aggtgttacg cggcttagat gcggtgcgta
     3541 aacgcccggg aatgtatatc ggcgataccg atgacggtac gggcttacac catatggtgt
     3601 ttgaggtggt tgataatgcg attgacgaag cattagccgg gcattgtaaa gacattattg
     3661 tcacaattca ttccgataat tcggtttctg tgcaagatga cggtcgtgga attccggtgg
     3721 ggattcaccc ggaagaaggc gtttcggcag cagaagtcat tatgactgtt cttcacgcag
     3781 gcggtaaatt tgacgataac tcctataagg tttccggcgg tttgcacggt gtgggcgtat
     3841 cggtggtgaa tgcactttcc tctaaattac aactcactat tcgccgtgaa ggacacgttc
     3901 acgagcaatt ctatagctta ggtgagcctg atgcaccttt agcgattatc ggcaataccg
     3961 aaaaaacggg gacgtcggtt cgtttctggc caagtttgga tattttcaaa aataaaaccg
     4021 aatttgaata taaaattctg tctaaacgct tgcgtgaact atcatttttg aattcaggcg
     4081 tttcgattaa attaattgat gaacgagacg gcaaagaaga gcattttaaa tatgagggcg
     4141 gtattaaagc ctatgttgag tatttaaacg aaggcaaaac tcatattcac aatacgccat
     4201 tctatttgac cactgagaaa gacggcattg gcgtggaaat ttccctacag tggaatgaca
     4261 gttacaacga aaatgtgtac tgctttacca ataatattcc acagcgtgat ggcggtacgc
     4321 acttagccgg tttccgtggg gcattaactc gtgcgttgaa aaactatatg gataacagcg
     4381 gggtattgaa aaaagccgat gcgaacattg atgcctcagg tgatgatgcc cgtgaaggtt
     4441 tagtagcggt gatttcggtg aaagtgccgg atccgaaatt ctcctcacaa accaaagata
     4501 aattggtgtc gtcagaagtg cgtggagcag tggaaagctc aatgaatgag gctttatccg
     4561 actatttagc cgaaaatccg gacgatgcaa aaaatatcgt taccaaaatt attgatgcag
     4621 cccgtgcaag agaagcagct cgtaaagccc gtgaaatgac ccgccgtaaa ggggcgttag
     4681 atttaggcgg cttaccgggt aaattagctg attgtcagga aaaagatccg gcgttatcgg
     4741 agctttactt ggtggagggt gactctgccg gtggctcggc aaaacaaggg cgtgaccgta
     4801 aaaaccaagc gattttgccg ttaaaaggga aaattctgaa cgtggaaaaa gcccgctttg
     4861 ataaaatgct ttcttcacaa gaagtagcaa ccttgattac cgctttaggc acaggcatcg
     4921 ggcgtgatga ttataatttg gaaaaattac gttaccacaa aatcattatt atgaccgatg
     4981 cggacgtgga tggtgcacat attcgtacgc ttttattaac tttcttctac cgtcaaatgc
     5041 cggagctgat tgaaaacggc tatatttata ttgcacagcc accgctttat aaagtgaaaa
     5101 aaggcaagca agagcgttat attcaagata acgatgaaat gtcgcaatat gaaattgata
     5161 ttgcattaga aggtgcaggc ttatatgtga gtgaagatgc tccagcgtta agtggcgtag
     5221 cgttagagaa cttaattgcc caatataacg gcgtacaaaa attaattgaa cgtttaagcc
     5281 gtcgttaccc aacattatta cttaacgaat taatttattc aaaaccgctt tcggtggaat
     5341 ttgcaaaaaa tcaagcaaat atgaccgctt ggagcgagca atttgtcgct acattgatgg
     5401 caaaagaggt gggcggcagt ttctaccgta ttaatacctt gttcaatgaa gaacgccaaa
     5461 tttatgagcc ggaaattatt gtgactacac acggtatgga cagtacctat cgtttagatt
     5521 acaactttat caacggtaat gaatacgctc gcattgtggc attaggcaac gagctgaacg
     5581 atttactatc tgattcagcc tatgtggtgc gtggtgaacg tcgccaagaa atcagcagtt
     5641 ttgctgaagc cttagattgg ttggtgaaag aatctcgtaa aggcttaact attcaacgtt
     5701 ataaagggtt aggtgagatg aatccggaac aattatggga aaccacgatg gatccggtgg
     5761 ctcgtaaaat gctacaggtc aatattaccg atgcgattgc ggcagataaa ctcttcagta
     5821 cgctgatggg cgatgaagtt gaaccacgcc gagatttcat tgaaactaac gctttgtatg
     5881 ctcagttaga tatttagtta aaaaatccgc atttgacatg cggatttttt attctcttaa
     5941 actagcattt taagcattcg ctaaaatcac cgcccgcttc ggagcagggt agccttcaat
     6001 ggttttgcta tgatcgtttg gatctaaaaa atccactaaa ctttcatttt ccaaccaatc
     6061 ggtttttcgc tgctcttcta gtgtagtgat tgcctcatca acacaacgca catttttaaa
     6121 gccgactttt tccagccaat taatgagtgc agcaacagaa ggaataaaat agatattttt
     6181 cattttcgca tagcgatcag ccggcactaa aacatcatta atatcgccat caatcaccag
     6241 cgtttctaac accaattcac cgcctctgac taattgggct ttgagttgag aaagatgatc
     6301 aagcggtgat ttgcgatgat aaagcacccc cattgaaaac acggtatcaa aagcagcaag
     6361 cggttgcatt tgctcaatac caagtggaat cagattagcc cgtctatcat tccctaagag
     6421 tttccgcact gcctcaaatt ggcacaggaa cagctcggtc gggtcaatac caactaccat
     6481 ttttgcccct tcgcctacca ttcgccacat atgataaccg ctaccgcagc cgacatctaa
     6541 aatggtgcgg tcttttaacg gtgcaagatg cggaagcaca cgatcccatt taaaatcgga
     6601 acgccattcg gtatcaatat gaatcccgtg tagatgataa gggcctttac gccacggcat
     6661 tagttgcttt aaatggtggg taatttgctt gacttccccc tcagataaag gcttgcttga
     6721 aatagactca accttgtctt ttagattgat acaagcggtc gaatttggta aaaaatctgc
     6781 aacttttgcc cacttggcat agtcagcgtg ggtggtcttt tcccattgtt tgagttgtaa
     6841 gggtaaggtt tctaaccaag cagaaaggtc ggttgtggca atttgttgat aaaaaggacg
     6901 aaagtcaatc attttgaaat ttatgtctag gggagagacc tatgccctcc cgaaaggtag
     6961 taaatagaaa ggacaggcac agaacctacc cctacgaaaa atataaaatt atctcgcaat
     7021 cggatttact ttcgcttttt gcactttgcg ataagcgttc agtaatttct gatgtgcagt
     7081 catattttca agcgattcgt ccgatgcagt taaaccgtgg aacgggttac cgccttggat
     7141 tgcaccccaa gcagcttcaa ccgcttgttt accgtacatt ttctcaaaca ccatacgata
     7201 ttgttccgaa tcacgctctt catctaagaa caactcaatc gattggatta agcagcggta
     7261 ataattgtta cgttctgctg agaatacgct tgcattcata ttcgctgtcc agtttgccca
     7321 gtctgaggct tgctctaagt tacctaaagc taaatgcagc atcgatttaa gctcaccgat
     7381 acgcaatgtt tgcattgcag agcctttctc tgccaccacg ccaataaatt cacgcacacg
     7441 ggttaaatca tcaatgcttt gctcatctaa ttcatcaagc agttcttggt aagtttcagc
     7501 atcgtgatgg aaatgtggca aatctaacaa gatttcacgc caatccatac ccatattgtt
     7561 attggcatag accaaatcat cgcttggata gatattcgac atacccggtg caagaatacg
     7621 gcaagcgtac acacctaaat gctcataatc cataatatac acaggctgat tatgcttgtt
     7681 gaaaatcgcc atcatattat taaattcttg ctccgttgtg ccggagaagt cccaatgcac
     7741 gaacggataa tccgcatcac gtttgaaaag atcccacgaa attagaccgc ttgaatcaat
     7801 aaagtgtgtc tcaaggttcg catgatctgc tacatcttca ttattaaatg aaggtggggc
     7861 aaacacatct aaatccttta agctacggcc ttgtaataac tcggttacgg tacgttcaaa
     7921 cgccacttgg aaattcgggt gtgcaccaaa agaggcaaaa caagtaccgt tatttgggtt
     7981 taacaagatc acacaaataa ctggaaattc tccgcctaat gaagcgtcat agcataaaat
     8041 cgggaagtct tcttgctcta gtttctcgat agaggctttg attgtcggat aaccgtcaat
     8101 cacactttgc ggaatttccg gcaagctgat tgcctcagta ataatacggt ttttgacaaa
     8161 acgctcgaac acttcggata agccctgcac tcgagcttca ttttttgtgt tgcctgccga
     8221 cataccgttt gaaacaaaca ggttgccgat aatgctttgc ggaatgtaaa ccgtttcatt
     8281 gtcagattgg cgaacgtaag gtagggtaac aattccacga tcataatttc ctgattgtaa
     8341 atcaaccaat aattccggcg tgatttcacc attcggatca aaatattccc ataaaaactc
     8401 gtccatcatc tccattggtg gaatggcttc atcatcaatc ggaaaccatt tttcggttgg
     8461 ataatgcaca aattcactat tagcaatctc ttgacctaaa taaaaatccg cccagaaata
     8521 gttggtagat aaacgctcaa aatactcacc taatgcagag gcaagagcgg cttttttgct
     8581 tgctccctta ccgttagaaa aacattgcgg acagtctgca tcacgaatat gcaccgacca
     8641 cacattcgga acaggattta accaagaggc ttcttcaata ttaaaaccta aggtttttaa
     8701 tttatgctga aaggtcgcaa tgctgtcttc aagtgcagca tctttaccgg taataaaagt
     8761 ttgttctgac atgataatac ctttaacttg tcgtaaaaat ggcaacattc tagcaaaaat
     8821 ccccatagat aagtaaattt tttgtgaaat ttctgctgaa agaacagatt tcaaaactta
     8881 gaaaaaatga ttacaagcgg tcaaatttta cttgaatttt gcaagtgaaa tttgtgtttg
     8941 atttagatta agaaaatatt atctaggata tatacagaat aaaaggttag aggtagtatt
     9001 gcttgtgtta ggaaggaaat attgaaggta taaaaatgga agaacatact attcagtctt
     9061 tttatgccca ttcggggaag ctttcagatc attcagattg gcaaacttta ctcagccacg
     9121 ccaataatgt tggcttgctt gccgccgaat ttgctgcgcc gtttgcttca caagaaattg
     9181 ctcgctgcac ggggctattg cacgatttag gcaaatatag tgaacgttac caaaagcgtt
     9241 tacatggcgg agaacgggta aatcactcta ctgctggtgc aaaaattgca gtggaacgtt
     9301 gggggccttt gggcaaaatg atggcgtttt gtatcgcagg ccaccacgct gggttagcaa
     9361 atggttctgg agaagggaaa aatcgttcta cacttacaca acgtttgcaa gagcaatttg
     9421 gctatggtca taaagatcta ccggtacttg acgctatttg gcagcaagaa cttaatttgc
     9481 ctgaaaaatt gcccttaccg ccgttaaagc cttctaaaaa cgaacctttc ttttcttacg
     9541 ccttttttat ccgaatgctc tattcttgcc ttgtcgatgc cgactttctt gatacagaag
     9601 ctttttatgc caatctcgaa aaaagaccgc ttgaacgagg aaattacccc aatttaaccg
     9661 cactccatca gcaatttaat caatttattg cacagtttag ggagcgaatt gccactcaaa
     9721 cgcctaatac gcaggaagca caacgtaaag cggaagtaaa ccgcttgcgg agtgaaattt
     9781 tggattatgc cgtatctcaa gcaaaacagg aaacaggtct gttttctctg actgtgccaa
     9841 cgggcggtgg taaaaccttt acttcaatgg cgtttgccct tgagcatgct aaacagtatg
     9901 gtttatgccg cattatttat gttattccgt ttaccagcat tattgaacaa aatgctgcgg
     9961 aatttcgtaa agcttttggc gaattaggaa cagaggcggt attggaacat cacagcactt
    10021 ttgatcacga tagcctacct gataaatcaa gccgagataa gctgaaattg gcatcagaaa
    10081 attgggatac tcctgttgtg gttacaactg cagtgcaatt ctttgaaagt ttgtttgccg
    10141 accgttcttc acgctgtcgc aaattgcata atatcgtcgg tagcgtgatt attttggacg
    10201 aagcccaaat gctaccgttg aatttattac gcccaattat ggctgcgatt gatgaattag
    10261 ctcgcaatta tcaatgttcg gtagtgcttt gcacagcgac acaacccgct attcatcaag
    10321 cgaacggttt ttataaagga tttgaaaatg tgcgagaaat tgcccctaat ccaaccgcac
    10381 tttttgaaaa attgaaacgt actacggtaa agcatatcgg tattcaaaca gatgtggagt
    10441 tgcaaagcaa actcgcagat aacccacaaa tgctgataat cgtgaataac cgccgtcacg
    10501 cccgagcgtt atatgattca gcgaaacagt tagagggagc ttatcacctc accacgctaa
    10561 tgtgtgctaa acaccgctca caaacgctga ctgaaattcg tcttcgccta aaacaaaacc
    10621 taccttgccg agtgattgcc acttctttaa ttgaagccgg tgttgatgtc gatttcccac
    10681 tggttatgcg agctgaagca ggactagatt cagtggctca agcagcaggg cgttgcaacc
    10741 gagaggggaa acgtttatct gtagaaagca atgtttgggt tttccaacct gaagaacagt
    10801 ggaaagcacc accagagcta ggcttacttt ctggctgtat gcgttcaacg gttcaggttc
    10861 acgcagatga tctacttaat ccgaaagcaa tcaatcatta tttccaagcg gtttatgagg
    10921 ctaaaggaaa agagctggat aagccaaata ttttaaaggc gtgtcacgac gctgggcaaa
    10981 gccttaattt cccattccaa aaaatagctg aagatttccg aatgatcaca agccatttaa
    11041 ttccggtgat tatccctttc gaccaagaag ccgaaaacct tattgaccgt ttacgctatg
    11101 cggatcaagt aggcggtatt ttaagaaaac tccagcctta cactgtgcaa gtaccggaaa
    11161 aagcattagc cgaactctat aacgctggca gagttgaaac cattaatgaa accaacttcg
    11221 gcaaacagtt ttactgctta attggaatgg atttgtatga tgaagtggcg gggttgagtt
    11281 gggagaatgt ggattttctt gagtcggaga aattggtttt atagatgaat gtttatttta
    11341 acttctttat aagtttaatt ttgcatagat atactttaat ataccaaata gcctatgacg
    11401 tctcgtagta aacagctagt ttgtaagaat agatatttgg aagggaaacg taaaatgaga
    11461 gaaccattat tagatgaaga tgaattaaaa aaatggttgc aaactatttt tactgacaat
    11521 ttggtcatta ttgtcggttc gggtttgtcc tgtgccgaag gtttgccggg aatgggagca
    11581 ttagctgata gattaaaaga acgaatgcct gaatgtcttg atgatataga taaggtaaca
    11641 tggaatacca tttctgattg tctggattct gaaggcttgg aaggtgcatt gttgaagcat
    11701 caagcaaatg agacgataga agccgctatt attaaaataa cagccgagta tgtactctcc
    11761 gaagagcaaa aagcgataaa caaatgtatt gctgagaatc agaagctcaa attttcttat
    11821 ttgcttcccc atatttcagc ttcaaatcct aaaattgccc gtgtaattac tactaattat
    11881 gatagattga ttgagtttgc ggcagagtat gaaaattggg gaatagattc aatgatggtc
    11941 ggtcgttatt ggggaaaaca taatcctgat ttgagtagga aattgcagat aagagacatt
    12001 agagtaaaag gtaaatgtcc aaaattg
//
LOCUS       DANLXO010000086        11795 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.086, whole genome shotgun sequence.
ACCESSION   DANLXO010000086 DANLXO010000000
VERSION     DANLXO010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11795
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.086"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..381
                     /locus_tag="PXD69_001996"
     CDS             <1..381
                     /locus_tag="PXD69_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284156.1"
                     /translation="VRLLNFDEYKFISPFEQTDRNEWKHEDIEFIYDEKISTEPPPYM
                     EEEKFQKIIMRFSKDIKIMMHNHINFIESDRFAEWILEKACVRSKTLTSFYGDKSVIR
                     AVPPLDWSGKYKYTKIGFRLCYDL"
     gene            746..1474
                     /gene="ttrB"
                     /locus_tag="PXD69_001997"
     CDS             746..1474
                     /gene="ttrB"
                     /locus_tag="PXD69_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrB"
                     /protein_id="HDL6284157.1"
                     /translation="MDLSKRSFLKELSALTVGASFVPLQSAQAFMPAWREGDENKRYA
                     MLIDLRKCIGCQACTVSCSVENATPLHSFRTTVRQYEITNGTQVVNNVVLPRLCNHCD
                     QPPCVPVCPVQATFQRKDGVMVINNEQCIGCGYCVQACPYDARFINEETKTADKCTFC
                     THRLEVGLLPACVESCVGGARVIGDLNDPKSQISQLYQAHKDDLKVLKPEAGTVPHVF
                     YVGLDDDAFVSKIDGQPMLWTGEA"
     gene            1476..2507
                     /gene="nrfD"
                     /locus_tag="PXD69_001998"
     CDS             1476..2507
                     /gene="nrfD"
                     /locus_tag="PXD69_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysulfide reductase NrfD"
                     /protein_id="HDL6284158.1"
                     /translation="MIREVLVEPQHIVWLPWIVHYFFFVGVAATAVFTAVLFAKKSLK
                     PTACELAAVTVALIGSIVAPVALTADLHQPSRILHFYTDFAWRSPMAWGAIILPLFSV
                     AVAGYFVLALAHHTRPNLPKWLAWLQLPILQNQGLLWAFRLFATLTAIGIIGYTVLET
                     YQTGTRTLWHSAWLLPIMLFSAWAVALGLTQAVCKMLFHTQTNTGLWTKLCLILTALS
                     LVGLAFSSPQATQDFAQLFNGSITAYLVGIFWLIALICNFSAKNHRLQWLGVLALIAF
                     GWLLRWVLVIQVQTIAKTNALQNPYHFDWTAVDGGLGIVSIFGLTVLVSIVVWQLILI
                     ICGGRKGEQ"
     gene            2497..5592
                     /gene="ttrA"
                     /locus_tag="PXD69_001999"
     CDS             2497..5592
                     /gene="ttrA"
                     /locus_tag="PXD69_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL6284159.1"
                     /translation="MNNKRRNLLKGGLALGGAAAFGAGYSPKVSEIAKGVMHGTSGEK
                     TRDAIHGNSLTPEYQVKDGKLLSNPEQIVCNTQCMGCWTQCGIRARVDLNTNQVIRIS
                     GNPYHPLSSDKTLPFGMPIAKAELLLAGESGIENRSTACARGAAFLEGVNSPYRITQP
                     LKRVGKRGEGKWQTISFEQLVEEIINGGNLFGEGEVEGLKTIRNLVDPINPKQPDLGM
                     KANQLLVTFAGPEGRQPILQRFAQKSFGTINFSNHGAYCGAAYRAGSGAFMKDFDNQQ
                     HAKPDWDHAEFILFIGTSPAQSGNPFKRQARQLAKRRPDDNFSYVVVSPRLEMTSSLA
                     TQNNHWVPIKPEGDLALVMGMLRWIIENERFNADYLSRPSLAAMENAGHVSYANASHL
                     IICEPNHPKFGQALRISDLQDVQLDPEEKVEENLIVVKDQASGELISAKDCLQAVIFV
                     EQIAKLLDGSEVLVKSSMQLLKEATQEKTLAEYSDICGVPVQTIENLAKKFTSHGHKA
                     NAITHGGTMHSTGFYTSWAILLLNAMVGNLNKKGGMAVAAGKFKDFGDGPRYNLANFP
                     NEVKPKGTNLARSKKAYQNSSEFKQKVTKGENPYPAQGAWYPFTGGQTTEMFTSMVQG
                     YPYFAKAWINHMANPVYGLTAMNPIALEKLKDPKILPLFVSIDAFMNETTALTDYIVP
                     DTHNFESWGFSTAWGGVPQRTSTARHPIVPSKNAKTAEGDTICMENFVIAVAKKMGLP
                     GFGENAIADLEGNRYPLHRTEDYFLRAAANIAFAGEKPAPDASEQDLLLTGVQRIMPK
                     IEQTLKAEERLKVANVYCKGGRFAPHESAWKEENMEFQWKNCLQIWNENVYKAQHHSN
                     GEHYWGCPRYMSPRFADGSTLEQHYPQSEWGFKLISFKSNIMSSITAPLLRLLSIKPE
                     GLVAMNRLDAEEKGIKHGDVVKLSTPTAGLTVQIVVLDGIARGTIGIEHGYGHKQIGA
                     SSYTIDGVEIPANPMIAKGINLNDLGIIDHTKAVKSPWVDWVCGSAVRNGIPAKVEKL
                     A"
     gene            5733..6578
                     /locus_tag="PXD69_002000"
     CDS             5733..6578
                     /locus_tag="PXD69_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6284160.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(6691..8088)
                     /locus_tag="PXD69_002001"
     CDS             complement(6691..8088)
                     /locus_tag="PXD69_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL6284161.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(8178..8801)
                     /gene="gmk"
                     /locus_tag="PXD69_002002"
     CDS             complement(8178..8801)
                     /gene="gmk"
                     /locus_tag="PXD69_002002"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL6284162.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            complement(8914..9387)
                     /gene="gpt"
                     /locus_tag="PXD69_002003"
     CDS             complement(8914..9387)
                     /gene="gpt"
                     /locus_tag="PXD69_002003"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL6284163.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            complement(9533..10942)
                     /locus_tag="PXD69_002004"
     CDS             complement(9533..10942)
                     /locus_tag="PXD69_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6284164.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            complement(11138..>11795)
                     /locus_tag="PXD69_002005"
     CDS             complement(11138..>11795)
                     /locus_tag="PXD69_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL6284165.1"
                     /translation="AAEKAAKEKAEAERLAAEKEVDPIAIIKAKGIDDTNYGLKLGNS
                     KETIEGKVTVRTQSYLYNQPYSVVTAQAVQRNGWENGNYIDKVDGTVTVKGLKTEKLP
                     TEGTATYSGKAFNHDGAKGFNGGDLTYNVNFSKRTGSGRVEGEFGNLIVLEEGTINNT
                     QISSTVHGNNPLNLSGKYTVEFFGKNAEEIAGEIQTKANLTGEVSNFGLAGTRGDIQK
                     "
BASE COUNT         3239 a         2705 c         2677 g         3174 t
ORIGIN      
        1 gtaaggctat taaattttga tgaatataag tttatttctc cgtttgaaca aacagataga
       61 aatgaatgga agcatgaaga tatagaattt atatatgatg agaaaatatc tacagaacca
      121 cctccttata tggaggaaga aaaatttcaa aaaataataa tgaggttttc aaaagatata
      181 aaaataatga tgcacaacca cataaacttc atagaatctg acagatttgc ggaatggatt
      241 cttgaaaagg cttgtgttcg ctctaaaaca ttaaccagct tttatggcga caagtctgtt
      301 ataagggccg ttccaccatt ggattggtca ggaaaatata aatataccaa aataggattt
      361 agattatgct acgatttgta gggggatata tgaagaaata cagtaatgat tctcttataa
      421 atagtattgt tatatctaaa ttaaaagcag gatggaaaat tagaaaagga aagaaacata
      481 atatattaat tgccccaaat tctaggagat tagcgatacc tagtaccccg agtgatatta
      541 atgcgtataa aaactttaga tctaaactaa accatcttat tgctttttaa ttagtatcaa
      601 tgccctatta tctacttgta tagggcattt cccttcatcc ttgacccaaa tcaactttcc
      661 ccttgatatg tggaaaacca caataccttg ccgttccctc tccgccttag aatacctttg
      721 ttatttttaa atttgtgggg gaaatatgga tttaagcaaa cgttcctttt tgaaagagct
      781 ttccgccttg acggtggggg cgagttttgt gccgttgcaa tcggcccagg cgtttatgcc
      841 ggcttggcgt gagggcgatg agaacaaacg ctatgcgatg ctgattgatt tgcgtaaatg
      901 tatcggctgt caagcgtgta ccgtgagctg ttcggtggag aacgccacgc cgttgcacag
      961 tttccgcacc acggtgcgtc aatatgaaat caccaacggc acgcaggtgg tgaacaatgt
     1021 ggtgttgcct cgtttgtgta accattgcga tcaaccgccg tgtgtgccgg tctgcccggt
     1081 gcaggcaacc tttcaacgta aagacggtgt gatggtgatt aacaatgagc agtgcatcgg
     1141 ctgtggttac tgcgtgcaag cctgcccgta tgatgcccgt tttatcaatg aagagaccaa
     1201 aaccgccgat aaatgcacct tctgcactca ccgtttggag gtaggtctgc tgccggcgtg
     1261 cgtggaaagt tgcgtgggcg gggcaagggt gattggcgat ttgaacgacc cgaaaagtca
     1321 aatttcccaa ctttatcaag cccacaaaga tgatttgaaa gtcctgaaac cggaggccgg
     1381 caccgtgcca cacgttttct atgtggggct agacgatgat gcctttgtga gcaaaattga
     1441 cgggcaacca atgctctgga cgggggaggc gtaaaatgat tcgtgaagta ttagtggaac
     1501 cgcaacatat cgtctggttg ccgtggattg tgcattattt cttcttcgta ggcgtggcgg
     1561 caacggcagt gtttaccgcc gtgctgtttg caaaaaaatc actgaaaccg accgcttgcg
     1621 agctggcggc ggtgacggta gccttgattg gctcgattgt cgcccctgtg gcattgactg
     1681 ccgacctgca ccaaccgagc cgtattctgc atttctacac cgattttgcg tggcgatctc
     1741 caatggcgtg gggagcgatt atcctgcccc tgttcagcgt ggcggtagcg ggttattttg
     1801 tgctggcatt ggctcaccat acccggccga acctgccgaa atggttagcg tggctacagt
     1861 tgccgatact gcaaaatcaa ggcttgcttt gggcattccg cctgtttgcc acactcaccg
     1921 ctatcggcat tatcggctac accgtgcttg aaacctacca aaccggcaca agaaccttat
     1981 ggcacagtgc gtggctgctg ccgattatgc tcttttctgc gtgggcggtg gcattggggc
     2041 ttacccaagc ggtctgcaaa atgctgttcc acacccaaac caacacgggg ctatggacaa
     2101 aactctgcct gattttaacc gcactttcgc ttgtcggact agcattcagt agtccacaag
     2161 ccacacaaga ttttgcccag ctcttcaatg gctcaatcac cgcttacctt gtcggcattt
     2221 tctggctaat tgccctcatt tgcaattttt ctgccaaaaa ccaccgcttg caatggctcg
     2281 gcgtgcttgc cctcatcgct ttcggctggc tactccgctg ggtactggtg atccaagtcc
     2341 aaaccattgc caaaaccaat gccttgcaaa atccatatca tttcgattgg acagccgtcg
     2401 atggtggttt ggggattgtc tcgatttttg ggctaacggt gctagtaagt atcgtggtat
     2461 ggcaactgat tttaataatt tgtgggggaa gaaaaggtga acaataaacg cagaaatctg
     2521 ttgaaaggcg ggctggcact tggtggggcg gcggcgtttg gggccgggta ttcgccgaag
     2581 gtgtcggaga ttgccaaagg ggtgatgcac ggcacatcgg gcgagaaaac ccgtgatgca
     2641 attcacggta attcgctcac gccggagtat caggtaaaag acggcaaact gctcagcaat
     2701 cctgagcaaa ttgtgtgcaa tacacagtgt atgggctgtt ggacgcagtg tggcattcgg
     2761 gcgagggtgg atttgaacac caaccaagtg attcgcattt cgggcaatcc gtatcacccg
     2821 ctttcctccg acaaaaccct gccgttcggt atgccgattg ccaaggcgga actgttgctg
     2881 gcgggcgaaa gtggcattga aaatcgctcc accgcctgtg ctagaggggc ggcgttcttg
     2941 gagggggtga acagcccgta tcggattacc caaccgttga aacgggtcgg aaaacggggc
     3001 gaaggcaagt ggcagaccat cagctttgag cagttggtgg aggaaatcat caatggtggc
     3061 aacctatttg gtgaaggcga agtggagggc ttgaagacga tccgcaatct ggtcgatccg
     3121 attaacccga aacagcctga tttgggaatg aaagcaaacc agcttttagt tacttttgcc
     3181 ggccccgaag gtcgtcagcc gattttgcaa cgctttgccc aaaagagctt cggcacgatc
     3241 aacttttcca accacggggc ttattgtggc gctgcgtacc gtgccggttc gggtgccttt
     3301 atgaaagatt ttgacaacca acaacacgcc aagccggact gggatcacgc tgaatttatt
     3361 ctgtttatcg gcacgtctcc ggcacagtcg ggcaatccgt ttaagcgtca ggctcgccag
     3421 cttgccaaac gccgccctga tgacaatttc agctatgtgg tggtttcccc tcgtttggag
     3481 atgacctcct ccctcgccac ccaaaacaac cattgggtgc cgattaagcc cgagggcgat
     3541 ttggcgttgg taatgggaat gttgcgttgg attatcgaaa acgagcgttt caatgctgac
     3601 tacctctccc gcccaagtct ggcagcgatg gaaaatgccg gccacgtcag ctatgccaat
     3661 gcgtcacatc tgattatttg cgaaccgaac cacccgaaat tcgggcaggc gttgcggatt
     3721 agcgatctgc aagatgtgca actcgacccc gaagagaaag tggaagaaaa cctgattgtg
     3781 gtaaaagatc aggcaagcgg cgaactcatt tcagcaaaag attgcttaca agcggtcatt
     3841 tttgtcgaac aaattgcaaa actgcttgat ggctcggaag tgttggtgaa atcctcaatg
     3901 cagttgctga aagaggcgac acaagagaaa acccttgccg aatatagcga catttgtggc
     3961 gtgccggtgc aaaccattga aaacttagcg aaaaaattca cttcgcacgg tcataaagcc
     4021 aatgccatca ctcacggcgg cacgatgcac agcaccggtt tttataccag ttgggcgatt
     4081 ttgttgctga atgcaatggt cggtaacctc aacaaaaaag gcggaatggc agtagccgca
     4141 ggcaaattca aagatttcgg ggacgggcct cgctacaatt tagcgaactt cccgaatgaa
     4201 gtgaagccaa aaggcacgaa ccttgcccgc agtaaaaagg cgtaccaaaa ttcaagcgaa
     4261 tttaagcaga aagtgacgaa gggcgaaaat ccgtatccgg cacaaggggc gtggtatccg
     4321 ttcaccggcg ggcaaactac cgagatgttt acctcaatgg tgcagggcta tccatacttt
     4381 gcgaaagcgt ggatcaacca tatggcgaac cccgtttacg gcttaaccgc tatgaacccg
     4441 attgcgttgg agaaattaaa agatccgaaa attctaccgc tctttgtctc tattgatgct
     4501 tttatgaacg aaaccactgc actgacggac tacatcgtgc cggacaccca caactttgag
     4561 agctggggct tttcaacggc gtggggcggt gtgcctcaac gcaccagcac cgcacgccac
     4621 ccgattgtgc cgtccaaaaa cgccaaaact gccgaaggcg acaccatctg tatggagaat
     4681 ttcgtgattg cggtggcgaa aaaaatgggc ttgccgggct ttggcgaaaa tgcgattgcc
     4741 gatttagaag gcaaccgcta tccgctccac cgtaccgaag attacttcct acgggcggca
     4801 gcgaacattg cctttgccgg tgagaaacct gcaccggacg ccagcgagca agatctgctg
     4861 ctcaccggcg tgcaacggat tatgccgaaa attgaacaaa cgctaaaagc cgaagagcga
     4921 ttaaaagtgg cgaatgtgta ttgcaaaggc ggacgttttg ccccacacga aagtgcgtgg
     4981 aaagaggaga atatggagtt ccagtggaaa aactgcctgc aaatttggaa cgaaaacgtg
     5041 tataaagccc agcaccacag caacggtgaa cactattggg gctgccctcg ttatatgtcg
     5101 ccacgttttg cggacggctc cacgctggag cagcactatc cgcagtcgga atggggcttt
     5161 aaactgattt cgtttaaatc gaacattatg agcagtatta ccgccccact gttgcgtctg
     5221 ctctcgatca agcctgaggg cttagtggcg atgaaccgtt tagatgcgga agaaaaaggc
     5281 attaaacacg gcgatgtggt gaaactcagc accccaaccg ccggcttgac ggtgcagatt
     5341 gtggtgttgg acggtatcgc ccgaggcaca atcggcatcg aacacggcta cggtcataaa
     5401 cagattgggg caagttccta caccattgac ggcgtggaaa ttccagccaa cccgatgatc
     5461 gccaaaggga ttaacctcaa cgacctcggc attatcgacc acaccaaagc ggtcaaatcc
     5521 ccgtgggtag attgggtctg tggctcagcg gtgagaaatg gcattccggc gaaggtagag
     5581 aaattagcct agccgaacaa gcggttggtt ttgcagaaaa atgtgcaaaa tcgaccgctt
     5641 ttattgatgt aagggacact gttccttatg caaaccagca ttgcagagcg taaaaaatca
     5701 tactctgcat tttaatttat tttggagaac ctatgacttt tgtcaaaaaa acagcactga
     5761 gcctgattgc aacggcactt ttcgctacat caagttttgc cgctgagcag agccaatacc
     5821 aacatattcg taatgcaacg gcgaaaattg aatatgccgg caagacgttt ttggttgatc
     5881 cgtatttagc ggagaaagat cgctacttac cgccgaatgc gaaaaaacgt aatccgacct
     5941 tggatatgac tgtgagcatt gatgaagtgt taaatggcgt ggatgcggtg atcgtaactc
     6001 acactcacca cgctcactgg gacgatgtag cacaacaacg tgtgccgaaa aatctgccga
     6061 tttttgtgca gaatgccggt gatgcccgtt taatccgttc acaaggcttt accgatgtgc
     6121 gtgtggtcgg caaagatacc ccgtttgaag gcgtaacctt aacccgaact cgtggccagc
     6181 acggcaccga tgcgatgtat gcgaacccga aaattgccga aatggtcggc gatgcgatgg
     6241 acgtagtgat gaaagcggaa ggcaaaccga ccgtctattt ggtgggagat accatttgga
     6301 accacgaaat cgaacattcg ttcaacactt acaaaccaga ctttgtggtg ctgaatgccg
     6361 gctgtgccaa actaccaaac tttgaaggca gcccgattat gtgtaccgaa gatgtttcca
     6421 aagcacacaa aatcgctcca caagcgaaaa tcttaactgt gcatatggac gccctgccac
     6481 aaacctcaat cagcagtgat cagatgcgtg attatgtaca aaaagaggga ttaaatcgtg
     6541 taactgtgcc gaaaaacggt gatgtgatta agttctagta gctaaactaa cattaccaaa
     6601 atggtttaag tagcaataaa tagcgaagcg ggttaagcca tcaagcctta acccactttt
     6661 accaaccata gtatatagtt ttagatataa ttatcttctg tatttacctg ccattgcttg
     6721 gtaaaccgca ttctcgttgg tcaaaatcgc atattttgca tttaaaatcg ccaactgaga
     6781 attaagctcg gtattcagtg cggtaatcca ctcacggaac tccgacaccc cttgttcata
     6841 acggttttta tagtatgaac tgatacgttt atttttcgca ttggtatctt gaaggatttt
     6901 taacgagctt ctcgactgcg tataactgta ataataacgg tcaatttcat ttaaggctga
     6961 ggtaattttt tgctcatagt ttaaacgggc agtcacataa tccgtttcag aaatttttac
     7021 gttattttta acccgattcc aatctaagaa cggtaaatcc aatttaatta agccgttacc
     7081 cacagggtta tctgccacat tgccgatatt ggttgcacta ccggtaatag aaccaccgat
     7141 ggttaaggtt gggaaccagc ttttctcggt tgcggttaag gttttaaatg cactttgtaa
     7201 gcgttgtaac gagcctacta catcagggcg attagcaatg gctgacactg gcacatttaa
     7261 atctacccct tgcaatttca cgctcataat attcgggtaa cgaatgttaa gcggagtatt
     7321 tggctgaaca tttaacaaat tgcgtaatgt ttgctcggca attttttggt tggttttcag
     7381 atcaattaca ctatttctgg cgtttaagac cgcttgttga gcctgatcaa ccgctaaact
     7441 atcaatcgca ccggcattca ttttgttagt taaaatacgg ctgatttgct cataatggcg
     7501 aatgctctct tcggtaatac gaatcgcatc acgatagtaa gctaactggt agtaagtagt
     7561 cacaaccgca ttaataatag ataaacgggt agcttttaag tcttcaatgg tggctttatg
     7621 cgtccattct gccgcactgg cggtatcggc taaacgtcgc cataaatcca cagtataact
     7681 taaattaaat gcagcttgag ctgcggttgt tgaaacaccg gtcgaaacat tatttgaaga
     7741 agccgaacct aaacctttag ccgcagaaac agaacctgaa ccactaaagg ttggcactaa
     7801 atttgcccct actaaattag cgttatacaa ggctttattg actgcaattc cgcttttggc
     7861 taaatcaagg ttatttttga tggctaaatc aaccacacgg tttaattccg catccgtata
     7921 gccttgccac cattgctcgt taatttgata ttgtttggta atttcatcat agctttgata
     7981 ggtttgctgt gcttgttgca aagtcccgtc attgctcata ttccctgtgg tacaagccgt
     8041 tacggttaga gccaacgcca cagaaaatgc taattttgaa agtttcatta catttccttt
     8101 tgaaaataaa gaggggaaaa tgggcgtatt ctacccaaaa acagattgcc tttccagtta
     8161 aatgaacaac tgttcattta attatttaac aaatcagtaa tcaaatgctg atgacgaatt
     8221 tgttgcgaac ctaagctcaa acgctcggca attaaaatcg cttttagctc tgccaatgcc
     8281 tgttggaaat catcattaat aatcacataa tcgaactcat tgtaatggtt catttccgac
     8341 accgcctctg ccatacgttt ggcaatggtt tcagcggaat cttgcccacg cccgattaaa
     8401 cgtttttcca attctgtttt tgacggtggc aaaataaaaa cggttttcac attcggcact
     8461 ttttcccgaa tttgtctagc cccttgccag tcaatatcca aaaagacatc aatgccctgc
     8521 tctaggctac gttcaatcat cggcaatgat gtgccgtaat aattgccaaa cacctccgcc
     8581 cattctaaaa aatacccttg ctcaatcagc tgcttaaact catcgtgcga agtgaaataa
     8641 taatgcacgc cgtcctgttc tgccggacga ggctgacggg tagtgtgtga aatcgaaagc
     8701 tgtacttccg aacggggtaa atccgccaac aaggcgttaa ttaaggaaga ttttcctgct
     8761 ccacttgggg cagaaataat ataaagattg cctaaactca ttatttgtat atacctattt
     8821 gattttggga atagggcgaa tgatgattcg cccctacatt tcataggaat aaataaaaaa
     8881 taatggacaa ctttcattgt ccattacaca aaattatcta cgtgccaaag gctgaacgaa
     8941 ggtaatgcct aaatcccaag gctgctcaat ccacgtttct tgtggaatat caatcacata
     9001 atcatcaacc aacggtgcac cgtgcggttt cgcaaacacg gttacaaaac gagctttcgg
     9061 gtacattctg cgaatttctt ttgccgtgtt gccggtatcc actaaatcat ctaccacaat
     9121 aaagccttcg ccatcggtat cggctgcgtg taacacattt aactcacctt ggctatcgtg
     9181 atcgtagctg gcaatgcaca ctgtttctac gtggcgaata cccaactcac gtgctaaaac
     9241 ggctgccgga aacaagccgc cacggctcac cgcaataatc cctttccact gtgtggcagg
     9301 taataaattt tctgccaact tgcgagcgtg catatggaac atatcccacg tcacgacata
     9361 tttttcattt gtgtattttt cactcataga aacaacctaa tataaaattg ggggctaccc
     9421 cgatataaaa aattgcacta ggataacccg aaaatgcttt tttcgccatc atttcattta
     9481 tttttttgtg ccggcagcta cgcaatcgta tgcttagcac aaaaaaccaa cactaaaata
     9541 gcttttctaa agtgaaaaag acttccttgt tttggcgaga gtaaaaatca gcaatattgc
     9601 tgtcaatttt ttgataacgg aaattcagct tcggcacaat gccctgccaa tgccaagtgc
     9661 ggttccaaac cgctaaattg gcttgatatt ccgtgtctaa ccgcttatag ccaaacaaat
     9721 agtgcttgtc ggcaaaatat cgcttgccaa agccgatact tgcctgcgtt gcccagcgtt
     9781 cgccttgaaa aaccgccccc actcgagcca gccacttatt cgagctttgt gctttttccc
     9841 gtgcaatttc acgcacgccg tctaaatttg caaaaaaccg cccatttttg accgcttgcc
     9901 actgcacacc gccactgagt tggtgctgat agctgttata acggcttgcg gttagctcct
     9961 caaaataccg tttttgcaaa tgggtaaaac tccccgacac caaccattgc gaattaaggt
    10021 aacgcaaacc gttgagtgtt gccccaaatt gaacattata acggctactc cccagccaat
    10081 tttgctcaat aaaaggcgaa aaagtcagcc gataagcgac ggtgcggtag ctataattcg
    10141 gcgaaacgga tacggattgc tcacggtaat ctcggttatc ccaatagtaa atcccgctat
    10201 aattgagcgt taaaccgaca aaatgattgc ctttcacgtt gtgcaattta ctcaacccta
    10261 agccataacg cacgcctttt gctgattgtg gcaaactgtc tgcatttttg cggaaaatcc
    10321 gcccatttac attcacaatc ggcgaagatg aggcattatt cacgttatct gtttgggtat
    10381 attgcagata aaaatcgggc tgccacgcct cattttcagc aatttggact tgagtattgc
    10441 gggcaatttt agcaagttcc ggcggtaaat gggcttgaat agccttaaat tcctgctctg
    10501 ccgcacgaaa ttgctgatct tctgccaaaa tcaacgccaa atcaaaacga gggtaaacca
    10561 aactcggggg cttagctaac agttggcgat agtgaaaaac tgcggtttga tgatcttttt
    10621 tcgcataggc aagtgcggct tgcgcatagt gccacaacaa cgggtcaaaa ttttcagttt
    10681 gcggataacg gcttaaaagc ggttcaagcg ttgcccaatc ttggctgaga atcgcttggt
    10741 taatttgctg ttcaacattc tgattgactg aatacgcagg ctgataagcg gtcggttttt
    10801 gtgaattttt tacaacattt tgctcaaatt taaccgcttg cggctgacgc tcaaaggaaa
    10861 tcgggtcagt gttgtgttca atcacctttt ctgcccatac aacggggctg aacagcgaaa
    10921 ataaaagggg atattttttc ataaagataa agaaaattgg taggggcgga cctatatgtt
    10981 cgcctctacg ggatttatca ctctctcccc ttgtgggaga gggttattag aagctgtaaa
    11041 ttgaaatcta aactattgtg tcttatggta tctacaagca atatcaagac aaatgccgtt
    11101 taatttttcg ttaaacggca ttgaacgtta gaaaaggtta tttttggata tcgccacgag
    11161 tgccggcaag tccaaaatta ctcacttccc cagtaagatt tgcttttgtc tgaatttcac
    11221 cggcaatttc ctctgcattt ttaccgaaaa attcgactgt atattttcca gaaaggttta
    11281 aaggattatt gccatgtact gttgaagaaa tctgagtatt attaatcgtc ccctcttcta
    11341 atacgattaa gtttccaaat tctccctcaa ctctacctga accggtacgc ttagagaaat
    11401 taacattata ggttagatca ccaccattaa aacctttagc tccatcgtgg ttaaatgctt
    11461 ttcctgaata tgttgcagta ccctctgttg gtaatttctc tgttttcaat cctttaactg
    11521 taactgttcc atcaacttta tcaatataat taccgttttc ccagccattt ctttgaactg
    11581 cttgtgctgt tactacagaa tatggctgat tatataaata actctgtgtt ctgactgtga
    11641 ctttaccctc aatagtttct ttactattac caagttttaa gccgtaattt gtatcatcaa
    11701 taccttttgc tttaataata gctataggat ctacttcttt ttctgctgct aaacgctccg
    11761 cttccgcttt ctctttcgcc gctttttccg ccgct
//
LOCUS       DANLXO010000087        11425 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.087, whole genome shotgun sequence.
ACCESSION   DANLXO010000087 DANLXO010000000
VERSION     DANLXO010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11425
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.087"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(36..830)
                     /locus_tag="PXD69_002006"
     CDS             complement(36..830)
                     /locus_tag="PXD69_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6284166.1"
                     /translation="MALLEVNHLNKRFVERSSLFHKQDFYAVKEVSFTLNRKETLAII
                     GENGAGKSTLAKMVAGMVGPTSGELIFRGTPLSFGDYKYRAKHIRMMFQDPNDAFDPN
                     YNIGQILDAPLRLATDLNEEERNERIFNTLKLVGMYPEQALVPISEASSGQKQRIAFA
                     RALILEPEIIIADDTINSLDFSVKTQLINLMLSVQQRQGIAYIYVGQNLGLIKHIADK
                     IMVMQSGEVVEYGLTKEVLLNPQHQITKRLIESHFGKHLSSYAWAS"
     gene            complement(931..2007)
                     /gene="fbaA"
                     /locus_tag="PXD69_002007"
     CDS             complement(931..2007)
                     /gene="fbaA"
                     /locus_tag="PXD69_002007"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDL6284167.1"
                     /translation="MSLLNIVKPGVVTGDDVQKVFAYAKEHNFAIPAVNCVGSDSVNA
                     VLETAARVKSPVIVQFSNGGAQFYAGKGIKPASGARADVLGAIAGAKHVHQLAEEYGV
                     PVILHTDHAAKNLLPWIDGLLEAGEKHFAETGRPLFSSHMIDLSEEPIEENMEICREY
                     LARMDKIGMTLEIEIGVTGGEEDGVDNSDVDESKLYTQPSEVLYVYDQLSPISPRFTI
                     AAAFGNVHGVYKPGNVKLKPSILGASQEYVSKERGLPAKSLDFVFHGGSGSSREEIRE
                     AISYGAIKMNIDTDTQWAAWDGILQFYKANEAYLQGQLGNPTGPDAPNKKYYDPRVWL
                     RKMEESMSKRLEQSFEDLNCVNVL"
     gene            complement(2104..3279)
                     /locus_tag="PXD69_002008"
     CDS             complement(2104..3279)
                     /locus_tag="PXD69_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDL6284168.1"
                     /translation="MSVIKMTDLDLAGKRLFIRADLNVPVKDGKVTSDARIVATIPTL
                     KLALQKGAKVMVTSHLGRPTEGVFEEENSLQPVVDYLNASDLGVPVRLVRDYLDGVEV
                     NENEIVVLENVRINKGEKKNDPELAKKYASLCDVFVMDAFGTAHRAEGSTYGVAEYAP
                     VACAGPLLATELDALGKALKEPQRPMLAIVGGSKVSTKLTVLDSLSKIADQLIVGGGI
                     ANTFIAAEGHAVGKSLYEEDLIPEAKRLAQVTNIPVPVDVRVGTEFSETAPATEKAVS
                     EVRADESIFDIGEKSSEQLAEIIRNSKTILWNGPVGVFEFPNFRKGTEVISNAIAEAT
                     ANGAFSIAGGGDTLAAIDLFGIKDKISYISTGGGAFLEFVEGKVLPAVEILEKRANG"
     gene            complement(3534..4892)
                     /locus_tag="PXD69_002009"
     CDS             complement(3534..4892)
                     /locus_tag="PXD69_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL6284169.1"
                     /translation="MANQQQERQSWSNRLAYIMTVAGATVGFGATWRFPYLVGEHGGG
                     AYVFLFCIAMIVIGIPMILVENVIGRRMRVNAIDAFAGFANGKKIASGWKILGYMGLL
                     GAFGILAYYMVLGGWVLNYIGSLLTGTLDLSQPVTVGTTQQFFQQSIFNSPMTIIAYT
                     ALFVLVNYFILVKGIVDGIERSVKYLMPILFIFLIVMVVRNITLPGAAEGIAFYLMPD
                     FSKITPKLFVFVLGQVFFALSLGFGVLITLSSYLDKSENLVKTATITGVMNTLIAVLA
                     GFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSNMWGGTVFAVIFFSLLVVAALTTSLTI
                     YEVIITALQEKAKISRQKAIFITLATIFLLGNIPSALSDNILQDVQVMGKSIFDAFDY
                     ISGNILFILTALGSAIFVGFVLKEEAKEELGAGKMFTTIWFNYVRFVIPVIILVIFFN
                     SL"
     gene            complement(4962..5789)
                     /locus_tag="PXD69_002010"
     CDS             complement(4962..5789)
                     /locus_tag="PXD69_002010"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HDL6284170.1"
                     /translation="MNHPKHRAFLKWAGGKYRLIPDIQTHLPKKACLVEPFVGAGSVF
                     LNTDFERYILADINPDLINLFNVVKADVEEYIAQTKQLFLHPQANTEAFYKARRAEFN
                     RSKDIFRRSVIFLYLNRFGYNGLCRYNQKKGYNVPFGRYKTHYFPEKELRFFAEKAQK
                     ATFVCADFEQVFELAKNQLTDYVIYCDPPYAPLAQETNFTQYAGGGFSLEQQGRLATL
                     ALEMKGLGVPVLISNHDTDFTRRIYQSADITQIQVQRSIGQKVGSRVKVGELFALFI"
     gene            complement(5803..6891)
                     /gene="aroB"
                     /locus_tag="PXD69_002011"
     CDS             complement(5803..6891)
                     /gene="aroB"
                     /locus_tag="PXD69_002011"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDL6284171.1"
                     /translation="MLQVNVELKERRYPIIIGAGLLNQPASYSPLKSGDKVMIVSNPT
                     VATHYLSVVTNALKELGCHVDSVLIPDGEEYKTLESLNLIFTALLEKNHNRDTTLIAL
                     GGGVIGDVAGYAAASYQRGIRFIQIPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     VSVIVDTNTLHTLSKREVSAGLAEVIKYGAIFDVTFFEWLEKHIDDLVSLKQDELEYC
                     IQRCCQLKADVVARDETEKGDRALLNLGHTFGHAIEARMGYGVWLHGEAVSVGMLEAA
                     ELSRILGDLSPQEVARLEKLLARANLPTISPDGMEPAEYLPYMWRDKKVLAGQLRLIL
                     LKSLGEAYVSSQATESQVLASIERFTQR"
     gene            complement(6915..7436)
                     /gene="aroK"
                     /locus_tag="PXD69_002012"
     CDS             complement(6915..7436)
                     /gene="aroK"
                     /locus_tag="PXD69_002012"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HDL6284172.1"
                     /translation="MAEKRNIFLIGPMGAGKSTIGRQLAQTLGMEFMDSDSVIEERAG
                     ADIDWIFDVEGEEGFRKREERILNELTQNYGIVLSTGGGSILSKDNRNVLSARGIVIY
                     LETTVDKQFERTQRDKKRPLLQTEDPRKTLEELAKIRNPLYEEIADITIHTDEQSAKV
                     VANQIIDMIDNLQ"
     gene            complement(7673..10237)
                     /locus_tag="PXD69_002013"
     CDS             complement(7673..10237)
                     /locus_tag="PXD69_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDL6284173.1"
                     /translation="MRIAKIIFSALLSLLVLGGVIGGLLYMHFKSDLPDVATLKNVEL
                     QQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIM
                     RAIWRTSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILEL
                     YLNKIYLGYRSHGVAAAAKTYFNKSLKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAED
                     RRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGE
                     NIAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRGAEKLWTGSSAWDDEKII
                     DHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFAPKGLKAGEQIWVR
                     QNKNREWALGQIPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIK
                     PFIYTAAMNKGLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGPLRTRVALGKSKNM
                     VAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGY
                     LIEPYIIDRIIDAQGYELYQANPVVACNSCDSPVVYPEPKYFESVKIHDEAQVGVQTI
                     ANSSNNDDDDVVEDVGDSEPELQANNSEKNAPSLMAESSHHIKGLRYAPHVISDELAF
                     LMRSALATAITGEPEYGWRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFGANIST
                     VVYVGFDDNKRVLGRGASGSSTALPAWTNYMKVALSDKPVEKSTLPKNIIEVNIDPNS
                     GFLGNGRKEYFIKGTEPTKRYIVERAYTEKAPQKTESAPLRLGLPPPGVLKSGELF"
     gene            10361..11059
                     /locus_tag="PXD69_002014"
     CDS             10361..11059
                     /locus_tag="PXD69_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComA"
                     /protein_id="HDL6284174.1"
                     /translation="MKLLKAHSKTPSNRIILGLSEDEQRYCLVKNKAEKFTVFWQAKP
                     ASIEELIGNLTPQEQAMMTLVRPIPYQYIWRKTVFMANTLNEAQLHRKVIHILKNEQP
                     LALDLLNIDYQRFPSSNDNLDKVVIYAVRKSYTENLSQFNSILDCELHCYARAIIHLT
                     QSQNNQPAPCFSFKQKYFQFTETELLILQTEPEDCIHLSDLKIDHLEIECEQEKQLYC
                     LALGASLWNGKVLI"
     gene            11035..>11425
                     /locus_tag="PXD69_002015"
     CDS             11035..>11425
                     /locus_tag="PXD69_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284175.1"
                     /translation="MEWQGIDLSANRKNNWFAGSDKGIKNVIYTLLLSALISLALIFL
                     YLQKNQEIQPLAQQLELVKTDILNIENKIISLNSNHTNTLPFAEPKKIAQLLAIIDNL
                     PLKNGGIETIQIYLETDLYLKIIGNLDN"
BASE COUNT         3544 a         2526 c         1941 g         3414 t
ORIGIN      
        1 ttatcaagta atcatattag agcaggagta aagatttagc ttgcccaagc ataggaacta
       61 aggtgctttc caaaatgact ttcaattaaa cgtttcgtaa tttgatgttg cggattcagt
      121 aaaacctctt tcgtcaagcc atactctact acttcgccac tttgcatcac cattatttta
      181 tcggcaatat gtttgatcag acctaaattt tgccccacat aaatataagc aatcccttgt
      241 cgctgctgga cacttaacat taaattaatt aattgtgttt tgactgaaaa atccagtgaa
      301 ttaatcgtat catccgcaat aataatttcc ggttctaaaa ttaaagcacg agcaaacgca
      361 atacgctgct tttgcccact ggaagcctct gaaataggaa cgagcgcttg ctcaggatac
      421 attcctacca attttagcgt attaaaaata cgctcatttc tttcctcttc atttaaatct
      481 gtcgccaagc ggagcggagc atctaaaatt tgtcctatat tataattagg atcaaaggca
      541 tcgttagggt cctgaaacat catacgaata tgcttagctc ggtatttata atcgccaaat
      601 gaaagcggtg ttcctctaaa aatcagttct ccagatgttg gcccaaccat accagcaacc
      661 attttagcca aggtagattt cccagctccg ttttcaccaa taatcgctaa agtttccttg
      721 cgatttaggg taaaagaaac ttcttttacc gcataaaaat cttgtttatg aaataggcta
      781 ctacgttcaa caaaacgctt attcagatga ttaacttcaa gtaatgccat aataaattgg
      841 tgcttggaaa taaagtgata gtttaccgca aaaaataaat aaaaaaagac cgcttataca
      901 agcggcctga tttatggaat tttttgcaaa ttataaaacg ttcacacagt ttaagtcttc
      961 gaaagattgc tctaagcgtt tagacataga ctcttccatt ttacgtaacc aaacacgtgg
     1021 atcgtagtat tttttgtttg gtgcatcagg gcctgtcggg ttacctaatt gaccttgtaa
     1081 atatgcttcg tttgctttgt agaattgaag aataccgtcc cacgcagccc attgggtgtc
     1141 agtgtcaatg ttcattttga ttgcaccgta gctgattgct tcacgaatct cttcacgtga
     1201 agaaccagaa ccgccgtgga aaacgaagtc taatgacttt gccggtaaac cacgctcttt
     1261 agatacatac tcttgtgaag cacctaagat tgatggtttt aattttacat tacccggctt
     1321 gtaaacaccg tgtacgttac caaatgctgc cgcaatcgtg aaacgtgggc tgattgggct
     1381 taattggtcg taaacatata aaacttcaga aggttgggtg taaagtttag attcatctac
     1441 atcagaatta tctacgccat cttcttcacc accggttacg ccgatttcga tttcaagggt
     1501 cataccgatt ttgtccatac gggctaaata ttcacggcag atttccatat tttcttcgat
     1561 tggctcttca gataaatcga tcatatgtga agagaataac ggacgaccgg tttctgcgaa
     1621 gtgtttttcg cctgcttcaa gtaagccatc gatccaaggt aataagtttt tcgcagcgtg
     1681 gtcggtgtga agaatcacag gcacaccata ttcttctgct aattgatgaa cgtgttttgc
     1741 acccgcaatc gcccctaata catctgcacg agcgcctgaa gccggcttaa tgcctttacc
     1801 cgcatagaac tgcgcaccac catttgagaa ttgcacgatt accggtgatt ttacacgagc
     1861 ggctgtttct aatacggcat taactgaatc tgaacccacg cagtttactg ccggaatagc
     1921 gaagttgtgt tctttagcat aagcgaaaac tttttgtacg tcgtcgcctg ttactacacc
     1981 cggttttacg atgtttaata atgacatttt tttcttcctt tgtatgaaat gtgcaaaagc
     2041 acattgttaa aatatacggc caaatcttgc aaaattttca caaaatttga ccgcttgtaa
     2101 ctgttagccg ttagctcgtt tttctaagat ttccactgcc ggtaatactt taccttccac
     2161 gaattctaag aacgcaccgc caccggttga aatgtaagaa attttgtctt tgataccgaa
     2221 taaatcaatc gcagctaagg tatcgccacc accggcaatt gagaatgcac cgtttgccgt
     2281 tgcttctgca atcgcatttg aaatcacttc tgttccttta cggaagttag ggaactcaaa
     2341 cacgccgacc ggaccattcc aaaggatggt ttttgaatta cggataattt cagctaattg
     2401 ctctgacgat ttttcaccaa tatcgaaaat tgattcatca gctcgtactt cactcaccgc
     2461 tttttccgtt gccggtgcag tttcagagaa ttcagtacct acacgcacat caaccggaac
     2521 aggaatattg gttacttgtg ctaaacgttt tgcttcaggg attaaatctt cttcgtataa
     2581 tgatttaccc acagcgtgac cttctgcggc aataaaggta ttggcaatac caccgcccac
     2641 gattaattgg tcggcaattt ttgaaagcga atcaagcaca gttaatttag tagatacttt
     2701 agaaccaccc acaatcgcta acattggacg ttgtggctct tttaatgctt tgcctaatgc
     2761 atctaattca gtggctaata acggacctgc acacgcaaca ggggcatatt ctgccacacc
     2821 gtaagttgaa ccttccgcac ggtgagctgt accgaatgcg tccattacaa acacatcaca
     2881 aagtgatgca tatttttttg ctaactcagg gtcgtttttc ttctcacctt tgttaatacg
     2941 cacgttttca agcaccacga tttcattctc gtttacttca acaccgtcta agtaatcacg
     3001 cactaaacga acaggaacac ctaaatctga tgcatttaag taatcaacta caggttgtaa
     3061 agagttttcc tcttcaaata cgccttctgt cggacgacct aaatgcgaag ttaccattac
     3121 tttagcacct ttttgtaacg ctaattttaa ggttggaatg gtagcaacaa tacgggcatc
     3181 tgatgttact ttgccatctt ttaccggtac gttaaggtca gcacgaataa ataaacgttt
     3241 acccgctaaa tcaaggtcag tcattttaat aacagacata gtttgttcct ctttagatta
     3301 aaatttaaaa gtgataacgg tcggattata tcagtttcta atcattttgg gctaacctag
     3361 atcaaataaa tgattaattt tttatcattt tagaatgcta ttatcctgac tgttcttatt
     3421 cccccccaat atgcttggtt aattaagcaa gaattgcaaa ttccccacaa aatttaaccg
     3481 cttgtcacta aaaataaagc tgtttgaaaa tccattcaaa cagcttatag aatttagagt
     3541 gaattaaaga aaatcaccaa gataatcacc ggaatcacaa agcgaacata gttaaaccaa
     3601 atagtggtaa acattttacc cgcacctaat tcctccttcg cctcttcttt tagaacaaag
     3661 ccaacgaaaa tcgcgctacc taaggcggtt aaaataaaca gaatattgcc actaatataa
     3721 tcgaaggcat caaaaatgct cttgcccata acctgcacat cttgcaatat attgtcactt
     3781 aatgctgatg gaatattacc caacagaaaa atagtagcca aagtaataaa aatagctttt
     3841 tgacggctaa tctttgcctt ctcttgcaat gcagtgataa taacttcata aatagttaac
     3901 gaggttgtta atgccgccac cactaataga ctaaaaaaga taaccgcaaa aactgttccc
     3961 ccccacatat ttgagaacac aatcggcaaa ctttggaata ctaaagtcgg acctgaattt
     4021 ggagcaacgc caaagctaaa taatgacgga aaaatcataa aaccggcaag taccgcaatt
     4081 aaggtgttca tcaccccagt aattgttgct gtttttacta aattctcgct cttatcaagg
     4141 tagcttgaaa gggttatcaa cacaccaaaa ccaaggctta atgcaaaaaa tacttgaccc
     4201 agcacaaaca caaacaattt tggtgtgatt tttgaaaaat cgggcatcag ataaaaggca
     4261 atgccttcag cagcccccgg taaggtaata tttcgaacca ccatcacaat caggaaaata
     4321 aacagaatcg gcatcaaata tttcactgaa cgctcaatac cgtccacaat gccttttacc
     4381 aaaataaaat aattcaccaa tacaaaaagt gccgtataag caataattgt cattgggcta
     4441 ttaaaaatac tttgttggaa gaattgttgg gtcgtgccaa cggtaacagg ttgagacaga
     4501 tctagtgtcc ccgtgagtaa gctaccgata taatttaata cccaaccacc aagtaccata
     4561 tagtaggcaa gaataccaaa tgctccaagc aagcccatat agccaagaat tttccaacct
     4621 gaggcaattt ttttaccatt agcaaaaccg gcaaaagcat caatagcatt cactctcatt
     4681 cggcgaccaa ttacattctc cactaatatc atagggatac caattacgat catcgcaata
     4741 caaaataaaa acacataagc accgcctccg tgttccccca caagataagg gaaacgccaa
     4801 gttgcaccaa aaccgactgt tgcaccagca acggtcataa tatacgccaa tcggttagac
     4861 caagattggc gttcttgttg ttgatttgcc atttaatact ccatcggcta acaataccgc
     4921 ttcaaccaac aagcggtcag atttttagaa aatattacaa attaaatgaa gagtgcgaat
     4981 aactcgccaa ctttaaccct tgagcccacc ttctgcccta ttgaacgctg tacctgaatt
     5041 tgggtaatat cggcagattg ataaatccta cgggtaaaat cagtatcgtg atttgaaatt
     5101 aatacgggaa cgcctaatcc tttcatttct aaagccagtg ttgccaaacg cccttgttgc
     5161 tctaggctaa aaccaccgcc agcatattgc gtaaaattcg tttcttgtgc taaaggagcg
     5221 taaggtgggt cgcagtaaat cacataatcc gttaattgat tttttgccaa ctcaaagacc
     5281 tgttcaaaat ccgcacacac aaaagttgcc ttttgtgctt tttcagcaaa aaaacgtagt
     5341 tctttttctg gaaaataatg ggttttataa cgcccaaagg gaacattgta cccttttttc
     5401 tggttataac ggcaaagtcc gttatagcca aatcgattta aatacaaaaa aatcaccgag
     5461 cgacgaaaaa tatcttttga gcgattaaac tccgcacggc gtgctttata aaaggcttct
     5521 gtattcgctt gtgggtgaag aaacagttgc tttgtttgcg caatatattc ctcaacatct
     5581 gctttcacca cgttgaaaag attaatcaag tcaggattaa tatcagcaag aatataacgt
     5641 tcaaaatctg tattcagaaa gaccgaacct gcaccaacaa aaggctcgac taaacaagcc
     5701 ttttttggca aatgggtttg aatatctgga attaagcgat atttaccgcc agcccatttt
     5761 aaaaaggctc gatgcttagg gtgattcatt tcattttaaa cattaacgtt gggtaaaacg
     5821 ctcaatagag gctaatactt gagattctgt ggcttgcgat gaaacgtaag cttcaccaag
     5881 tgatttcaat aaaattaggc gtaattgacc tgccagtact tttttatctc gccacatata
     5941 aggtagatat tctgccggtt ccattccatc aggtgaaatt gttggcaaat tggctcgggc
     6001 caataatttt tccaagcgag caacctcttg aggacttaaa tcccccagaa tacgagataa
     6061 ttccgcagcc tctagcatac caaccgaaac agcctctccg tgtaaccata caccatagcc
     6121 catacgtgct tcaatggcgt gaccaaaggt atgtcctaag tttagtaatg cacgatctcc
     6181 tttttccgtt tcatctcgag caaccacgtc agcttttagc tggcaacaac gctgaataca
     6241 atattccagc tcatcttgct tgagactgac caaatcatca atatgctttt caagccattc
     6301 aaaaaaagta acatcaaaga ttgcaccgta tttgatgact tccgccaaac cagcactgac
     6361 ttctcttttg gataaggtat ggagcgtatt ggtatcaaca atcacagaaa caggctgata
     6421 aaaagcccca atcatatttt taccgagtgg gtggtttact gccgttttcc cgcctactga
     6481 agaatcaact tgagccagta aagtggtcgg aatttgtata aaacgaatac cacgttggta
     6541 agaggcagct gcatagcctg caacatcacc gattacacca ccgcctaaag caattaaagt
     6601 ggtatcgcga ttatgatttt tttctaataa tgcggtaaaa atcaaattta atgattctag
     6661 cgttttatat tcttcaccgt cgggaatcaa taccgaatca acgtggcaac ccagctcctt
     6721 taacgcattt gttaccacac taagataatg tgtcgccacc gttggatttg agacaatcat
     6781 caccttatct ccagatttta atgggctata actagcaggc tgatttaata accctgcacc
     6841 aattataatc gggtaacgac gctcttttaa ttccacattg acttgtaaca tatcttagct
     6901 cctttcttac ctggctactg taaattatca atcatatcaa taatttgatt tgccactact
     6961 ttagcgctct gctcgtccgt atgaatagta atatctgcaa tttcttcata caatgggtta
     7021 cggattttcg ctaactcttc caacgtttta cgggggtctt ctgtttgcaa taaagggcgt
     7081 tttttatctc gctgagtacg ttcaaactgt ttatccactg tcgtttctaa ataaataacg
     7141 ataccacgag ccgataacac attacggtta tctttagata aaatcgaacc accgccagtt
     7201 gaaagcacga taccataatt ttgcgtcagt tcatttagaa tacgttcttc acgcttacgg
     7261 aaaccctctt caccttcaac atcgaagatc caatcaatat ccgcacctgc tcgttcttcg
     7321 atcacactgt cggaatccat aaattccata cctaatgttt gagcaagctg acgaccaatc
     7381 gtacttttac ctgctcccat cggcccaatc aaaaaaatat tacgtttttc agccattatt
     7441 tcttcttcat tttaaaattt actaaacatt tgatctgtga aattaaaaga aaaaatgacc
     7501 gcttgttcta caagcggtct gatttcttta aaaaattgca ataaaactca tttattgact
     7561 aaggaatatc caaatataac tcacaaatcg cccaaaataa aattggcact tattatcgca
     7621 agaaatcccc ctatttttca acttttaaga gcattatcct tgtaataaat tattagaata
     7681 attcaccgct ttttagcacc cctggtggag gtaatcctaa acgtaacggc gcagattctg
     7741 ttttttgagg cgctttttca gtataagctc tctctacaat ataacgtttt gtaggctcag
     7801 tacccttaat aaaatactct ttacgtccat ttcctaagaa accactatta gggtcaatat
     7861 taacctcaat aatatttttt ggaagggtac ttttttcgac aggcttatct gacaatgcaa
     7921 ctttcatata atttgtccaa gctggtaaag cagtactaga acctgaagca cctctaccta
     7981 atactctttt attatcatca aagccaacgt acacaacagt agaaatatta gcaccaaatc
     8041 ccgcatacca agttgccttg gcattattgg ttgtaccagt cttcccgccc acatccgctc
     8101 gttttatcgt attgagcatt ttatagcttg ttcctcgcca gccatattca ggctcaccag
     8161 taattgctgt agctaaagca ctacgcatta aaaaagcgag ttcatcacta ataacatgag
     8221 gagcgtaacg taaccctttg atatgatgag aagattctgc cattaagctc ggcgcatttt
     8281 tctcgctatt gttcgcttgt aattcaggtt ctgaatcgcc aacatcttcc acaacatcgt
     8341 cgtcatcatt attcgaggaa ttcgctatag tttgtacacc gacttgagct tcatcatgaa
     8401 ttttgactga ttcaaaatat ttaggctcag ggtaaacaac tgggctatcg caactattac
     8461 aagctactac aggatttgct tgatataact cgtagccttg ggcatcaata atacggtcaa
     8521 tgatatatgg ttcaatcaaa taacctccat tattaaatac tgcataagct cgagccattt
     8581 ctaatggcgt aaaagatgca gcacccaatg caagagattc tgttgcaaca tactgatttc
     8641 ggttaaagcc aaaacgttgt aagtagtctg caacataatc aatccctgcc atttgtaata
     8701 tacgaatagc caccatattt ttcgatttac ctaatgcaac acgagttctc aacgggccgc
     8761 cataaacccc atcggcattt ttaggtcgcc actctttttg ccctttcttt ttaatgacaa
     8821 taggagaatc gctaattgtt gttgaaagac ttagcccttt attcattgcc gctgtgtaaa
     8881 taaacggttt aatcgcagag cctacctgaa ctaatgactg agtcgcacga ttgaaacggc
     8941 tttgttcaaa gctaaagcct ccaacgatag attcaatggc accgttttca ctattaattg
     9001 acactagggc tgaatttacc tccggaattt gtcctaaagc ccactcccta tttttatttt
     9061 gacgtaccca aatttgttca cctgctttta accctttagg tgcaaaagaa gcatttgtac
     9121 gttttaaaac agagatatca ccatttgcca ataaaattgt atattttgat ttatctgctt
     9181 gcattacaac agctggtgta aacggctctg attttggcag cttacttaaa tgatcgataa
     9241 ttttctcatc gtcccaagca gaactacctg tccataattt ttcagcgcct cgccaaccat
     9301 gacggcggtc ataatcaatc aaattttcac gtaacgcatc ttgtgctgct ttttggtctg
     9361 ctgaaagtac cgtggcgtac acttttaagc ctttgttata agcaatattt tctccatagc
     9421 gtttcacaat ttcttgacga accatttctg tcacataatc cgctcgaaat tctaatgtcg
     9481 caccatagta gttagctact actggctctg ctttagcttt ctcatattcc tcttttgtaa
     9541 tatctccggt ttctagcatt ctcccaagca ctacattacg acggtcttcc gcccgtttta
     9601 ctgaataaag tggattcatc gttgaaggcg cttttggaag ccctgcaata attgctattt
     9661 cagaaagggt taaatctttc aaagatttat taaaataagt tttagccgca gcggcaacac
     9721 cgtgagaacg ataccctagg taaattttgt ttaaatacag ctccagaatc tcatttttac
     9781 tgagaacctg ttcaatttct aaagctaaaa ttgcctcttt ggccttacgc tctaaactac
     9841 gttcaggtgt taagaaaaag tttttcgcca gctgctgggt gattgtactt gcgccttgag
     9901 tatctccctg gctagtgcgc catattgcac gcataatacc tttaggatcg atccctttat
     9961 gctcgtaaaa acgtgcatct tcggtagcaa gaatcgcttt tactaacatc ggtggaatat
    10021 catcaagctt gaccggaata cggcgttctt ctcctacttc accaattaat ttaccatcta
    10081 aggtaaaaat ctgcataggc tgctgtaact ctacattttt cagcgttgcc acatcaggca
    10141 aatcagattt gaaatgcatg tacagtaaac caccaattac cccacctaaa accaagagtg
    10201 aaagtaaagc actaaatatt atttttgcga tccgcatcga aaaaatctct tttggttaat
    10261 gacgaaacat aaatttaaag ccaatattag gtcactaagt ataagctaaa aacgcttact
    10321 tcgcataact aattgcaaaa ctttccttac tatacttact atgaaattac ttaaagcaca
    10381 ttcaaaaaca ccttcaaacc gtatcatctt aggcttaagt gaagatgaac aacgttactg
    10441 cttagtcaaa aataaagcag aaaaattcac cgttttttgg caagccaagc ctgcgagcat
    10501 cgaagagctt atcggtaatc tcaccccaca agaacaagca atgatgacgc tggttcgccc
    10561 gatcccttac caatacattt ggcgaaaaac cgtttttatg gctaacaccc tcaatgaagc
    10621 tcaattacac cgtaaggtaa ttcacatttt aaaaaatgag cagccacttg cattggatct
    10681 actcaatatt gactatcagc gatttccaag cagcaacgat aatctggata aagtggttat
    10741 ctacgccgtg cgaaaaagtt ataccgagaa tttgagccaa tttaacagca tcttagattg
    10801 tgagctgcat tgctatgcac gggctataat tcatttaaca caatcccaaa ataatcagcc
    10861 tgcgccctgt ttttcattta aacagaagta cttccaattt accgagacgg aattactgat
    10921 attgcaaaca gaacctgagg attgtattca tctatctgat ctcaaaattg accatcttga
    10981 aatcgagtgt gagcaagaga aacagctata ttgcctcgcc ttaggagcaa gtttatggaa
    11041 tggcaaggta ttgatttaag tgctaatcga aaaaataact ggtttgccgg cagtgataaa
    11101 ggcatcaaaa acgtgattta tacactttta ttatctgccc tcattagctt ggctctgatt
    11161 tttctctatt tgcaaaaaaa tcaagaaatt caaccgcttg cacagcaatt agagctggta
    11221 aaaaccgata tattaaatat tgaaaataaa attatcagct tgaatagtaa tcatacaaac
    11281 accttgccct ttgccgagcc taaaaaaata gcacaactac tggcaataat agataactta
    11341 ccgctcaaaa atgggggaat tgaaacgata caaatttatc ttgaaaccga tctctattta
    11401 aaaataatcg gtaatttaga taatc
//
LOCUS       DANLXO010000088        11395 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.088, whole genome shotgun sequence.
ACCESSION   DANLXO010000088 DANLXO010000000
VERSION     DANLXO010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11395
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.088"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..482)
                     /locus_tag="PXD69_002016"
     CDS             complement(<1..482)
                     /locus_tag="PXD69_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284176.1"
                     /translation="MIQNDPRDAIILSLLANAVYGGHNNSQISYQETEEVNLYARLRQ
                     VEGDVREIKSNYLTKEAFYKAGGSTLIALVVTAGIALWTVYSHLDTKVEARFSKIDDK
                     FVQVETNIKNLDIRLTKVESRLDNVEQRLDNVEQRLGNMEKKIDGVDNKLDLLLQQFK
                     "
     gene            complement(487..867)
                     /locus_tag="PXD69_002017"
     CDS             complement(487..867)
                     /locus_tag="PXD69_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284177.1"
                     /translation="MNNKRIKPEQFADFITQRTGRNLTCPICNSQEHYLHDGYDTFTE
                     LCGEKIIGVPTIPYRIEPSPDEVMKFAAPEFHSLHFNEREGTKYWLDQKARTAVIVTC
                     VCCNNMLFFDRERILEWIKGSQNE"
     gene            complement(918..1577)
                     /locus_tag="PXD69_002018"
     CDS             complement(918..1577)
                     /locus_tag="PXD69_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HDL6284178.1"
                     /translation="MTTLGSRIKAYREQLGISQYEVAERCTSIDNRDKNNKWGQSRIA
                     NYERNNRTPDLDDIEILSKVLGVSPETLAFDTNVQLARPTKSNSYPLISNIQAGLWTE
                     AFDFKDSEGYDYIDTEIDAGPDAFFLRISGMSMEPKFSEGDLVLIDIRKRPHPGDYVA
                     AVNGTGEATLKRYRELGEWSESGNPHFELIPLNPDFPTLSSMKQDIRIIGVAVEHRSY
                     L"
     gene            1707..1913
                     /locus_tag="PXD69_002019"
     CDS             1707..1913
                     /locus_tag="PXD69_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6284179.1"
                     /translation="MNKIAEIRNQIGISQAQLAVQIGWGQPRIANYETGNRTPSIYVA
                     QKIVEGLNELGANVRIDDVFPVGN"
     gene            1934..2194
                     /locus_tag="PXD69_002020"
     CDS             1934..2194
                     /locus_tag="PXD69_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284180.1"
                     /translation="MPRNELTKNARAIADLIHRKSATVTHKKLARAIGLSESQFSRTF
                     ADNVEMVAVIIDYLSIELADKDELLELKEKRYKRINLEEATT"
     gene            2358..2528
                     /locus_tag="PXD69_002021"
     CDS             2358..2528
                     /locus_tag="PXD69_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284181.1"
                     /translation="MKNQRNDTQKSSLWQEFEYRKRLKNLIESGLSVAEIETRSQQIY
                     EELKSECTTEAN"
     gene            2503..3372
                     /locus_tag="PXD69_002022"
     CDS             2503..3372
                     /locus_tag="PXD69_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL6284182.1"
                     /translation="MNAQPKQINPILKLHPKQSEAKKVSVDDGYTQIPNELLKAILRS
                     GVLGWKGSYLLATVLKTLSWHKESDWFTHSQVCEMMNIEPTKYHINQLSAARKELIRE
                     NILFEDGKETGVNLSVFEWKMVYPEKVGSSRNNRELIPEKVGNGYPEKVGNTKETITK
                     EKINNEFTNVNSVQQPETSLPKKTKSEPVDYQGVMEEFNRAVEDTPIPQIRAMSDERK
                     RSVHALAKILRKEFGGYTRQHFADYFNDFVRQASSRKDRFYFGGLDGSAWVANFGYII
                     RSKTFYKTWEDSL"
     gene            3369..4730
                     /locus_tag="PXD69_002023"
     CDS             3369..4730
                     /locus_tag="PXD69_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HDL6284183.1"
                     /translation="MSQNLKNITYEVEYLLVGALLKSGLNSKARDVLSWLEPEMFATF
                     QLGVIYEAIRKQALKDNVIDMLLLNTDYGQDFATLAEIMKNTISGANLDGYAEKVRQY
                     HQRREAQRVFLDVAGELQNARDEQLDAITSTGLAHLSKLLQRGGKVKPIDMNDLLEGY
                     LELFQERAKPSFKERLLFTGIEALDGKLGGINDTDICIVAGRAGNGKTETAITFTKNI
                     IENKGSVLFFSLEMSKEQIMDRLIASASGVNSVKLRNPEMMNDEDFARMGTAIQPLQN
                     QQLYIVDKSGLTAEEIVAIAESHIQEYGKVSAVVIDYIGLVRHGKLDGKINRTYQIGE
                     SMERFKTFCKNNHTPMILLAQLNRNADGSRPTNADLRDSGSLEQDASQIIMVHNQRNK
                     DGEPAPYTEWIVTKNRFGANGTVYMQFQQGRFVECDQAEAREYFQPKETKTSSNKRYG
                     AMQ"
     gene            4727..5263
                     /locus_tag="PXD69_002024"
     CDS             4727..5263
                     /locus_tag="PXD69_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HDL6284184.1"
                     /translation="MTDFDKNIKYKIIYADPPWKYKDSGCNGSAENHYTTMNIKEICD
                     LPVQDISDKDSILFLWVTYPMLPEGLKLIEAWGFNYKTIGFQWVKTNKKNKNSFFFGL
                     GRWTRGNTECCLIATKGKPSRVSNKVSQLIIEPIQHHSKKPDIVREKIVELMGDLPRI
                     ELFARNKTQGWDVWGDEV"
     gene            5354..5569
                     /locus_tag="PXD69_002025"
     CDS             5354..5569
                     /locus_tag="PXD69_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284185.1"
                     /translation="MITYKCPKCNGELEDLSINDEWGWFLDEPYRCNGHYTGRFPNIS
                     RDSTLNRTKSCGYFSKEEVKKVNGTQR"
     gene            5553..6059
                     /locus_tag="PXD69_002026"
     CDS             5553..6059
                     /locus_tag="PXD69_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL6284186.1"
                     /translation="MAHSVNDIVKAHGRRYKARLKIQMIKMQGGVLVPLNEREAEALV
                     SLKNGEQYEIEVIRTRNPAFHRKVFAFLNFCFEYWSADKTEWEFFDERKQFDTFRKNL
                     TVLAGFKEITYTLDGRMRVEAQSLSYGNMEQDEFEQVYKALINAAIKHVFNNTKDENR
                     INQLYSFF"
     gene            6109..6321
                     /locus_tag="PXD69_002027"
     CDS             6109..6321
                     /locus_tag="PXD69_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284187.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLFFLVILTVRYVGYLLIYPLAFFAA
                     VGSFIVFCQWTYQEWLYYFKRGFAPI"
     gene            6367..6561
                     /locus_tag="PXD69_002028"
     CDS             6367..6561
                     /locus_tag="PXD69_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284188.1"
                     /translation="MTKFFETIAFVMLFGIIPSCLLAINTTLMNMNIKNAPWFMVIIQ
                     LGFNITCYWLWFISVMRNVI"
     gene            6689..7258
                     /locus_tag="PXD69_002029"
     CDS             6689..7258
                     /locus_tag="PXD69_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinG"
                     /protein_id="HDL6284189.1"
                     /translation="MANKPPKQHKCKECGSYYIKFQSTQQVCSVKCAMAMGKRKTEAK
                     RKKSAKIDRLEQRKRLEKLKSRRDFEKDLQKIFNKFIRLRDKDLPCISCGRYHQGKYD
                     AGHYKTVGGNPELRFNEDNCHSQCVPCNRHLHGNIVNYRVNLIEKIGLERVEFLERKD
                     HPPLKLTIEQIKDLIKVYKAKCKELERVT"
     gene            7248..7721
                     /locus_tag="PXD69_002030"
     CDS             7248..7721
                     /locus_tag="PXD69_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284190.1"
                     /translation="MLPRKIKNKWLEPEKQKWIEELLRLWGAWEFGGLDLESRVNMIY
                     RLMKSAEGVKSLSSREVCNDSLGTLINEIFTVVTKRDVMLADILKQKYWFGRSERQIA
                     IYYQLRDSEGRKERRWQEIIQDKCKKAERIIADILESKISSSNSTDKLKKYQFSP"
     gene            7949..8024
                     /locus_tag="PXD69_002031"
     tRNA            7949..8024
                     /locus_tag="PXD69_002031"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7982..7984,aa:Trp,seq:cca)
     gene            8041..8226
                     /locus_tag="PXD69_002032"
     CDS             8041..8226
                     /locus_tag="PXD69_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284191.1"
                     /translation="MYNLDDAIQECREKFGEDKPYFSEAGTLTFAGCKALSRLRDEKL
                     GIKAPPNFPFPRVEDLS"
     gene            8252..8422
                     /locus_tag="PXD69_002033"
     CDS             8252..8422
                     /locus_tag="PXD69_002033"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284192.1"
                     /translation="MTEQLNTQSKSGEEDQEKSQDRYAVGWPSRRISDCVQHFRSRKI
                     YPFASNNDVKQG"
     gene            8565..8810
                     /locus_tag="PXD69_002034"
     CDS             8565..8810
                     /locus_tag="PXD69_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284193.1"
                     /translation="MKLMKDMGTQSYIWSGFSTWLAWLGEQQNLMLLSLAIGIVTAIA
                     GLIQRFDEWRRRKREDERAEELHQAKMARLRKGLSDE"
     gene            8803..9372
                     /locus_tag="PXD69_002035"
     CDS             8803..9372
                     /locus_tag="PXD69_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL6284194.1"
                     /translation="MSKSLKYGSGIVCGIAAIITLVQYQHPEIRTNQAGLEIIGNAEG
                     CRRDPYKCPADVITVGIGSTEFGGEKIDPNRIYSDKEIAERWAKDLKIAESCVNRHFN
                     GKDMNDNQFSGMTSAVFNMGCYNMRFYRNKQGQYVQTTIHKLAVNKQFEEMCHRLPDF
                     IRASGKVLNGLVIRREKEKALCLTGLVAR"
     gene            9345..9695
                     /locus_tag="PXD69_002036"
     CDS             9345..9695
                     /locus_tag="PXD69_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL6284195.1"
                     /translation="MLNWISGTIAIVILGLCVWLWGQSQMIDSLRAENRAQAQTIEQQ
                     QKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNEITSILAQDSCAKADLPNGVA
                     DSIKRLHQQNNHKH"
     gene            9700..9873
                     /locus_tag="PXD69_002037"
     CDS             9700..9873
                     /locus_tag="PXD69_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284196.1"
                     /translation="MYPPAAYLVPCGRTEFSGRTYGDTVEYLVKVMGERDLCANQIDR
                     IREWQAQTKQGFK"
     gene            10265..10789
                     /locus_tag="PXD69_002038"
     CDS             10265..10789
                     /locus_tag="PXD69_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL6284197.1"
                     /translation="MTKKGEVKATSKGVGKLTDKQKRFVEEYLIDLNATQAAIRAGYS
                     EKTAYSIGEENLRKPEIRSAIQEAQNKRSERTQITQDDVLNGLLEVIAMSTGKKIVTE
                     TDVAKNDNGELVGFDIAKTKFEPAAANKALELLGKHLGMFKDKVDLINSDGSLNRPMV
                     IELIAPSLDDESTD"
     gene            10773..>11395
                     /locus_tag="PXD69_002039"
     CDS             10773..>11395
                     /locus_tag="PXD69_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL6284198.1"
                     /translation="MKAQIELPPKLLPVFAKDYRYKGAYGGRGSGKTRAFAKMSAVSA
                     YKRAMRGESGVILCGREFMNSLEESSLEEVKQAIKSEPFLANFFDVGEKYVRTKDGRI
                     SYVFSGLRHNLDSIKSKARILIAWIDEAETVSETAWRKLIPTVRENNSEIWVTWNPEN
                     RGSATDTRFRQNPPENSCIIEMSYQDNPWFPDVLEQERLNDKQRLDDA"
BASE COUNT         3651 a         1956 c         2581 g         3207 t
ORIGIN      
        1 cttttgaatt gttgtagtaa cagatcgagt ttattatcaa ccccatctat tttcttctcc
       61 atattgccta gtcgctgctc aacattgtct agtcgttgtt cgacattatc caatctagat
      121 tcaactttag tgaggcgaat atcaagattt ttgatattgg tctctacttg gacaaactta
      181 tcatcaattt tcgagaatcg agcttcaact ttggtgtcaa ggtgtgaata tactgtccat
      241 aatgcaattc cagcagtaac tactaatgca atgagtgtag agccaccagc tttataaaaa
      301 gcctctttcg tcaaataatt tgacttgatt tctcttacat cgccttcaac ttgtcttaat
      361 cgagcatata aattcacttc ttccgtctcc tgataactaa tttgtgaatt attatgcccg
      421 ccgtatactg catttgcaag taaggatagt atgattgcat ctctaggatc attttgaatc
      481 attggtctat tcattttgtg agcccttaat ccattctaaa attctctctc tgtcgaaaaa
      541 aagcatatta ttacagcaaa cacaagtgac aataacggct gttctcgctt tttggtctaa
      601 ccaatatttt gttccttccc gttcattgaa atgcaaagaa tgaaattcag gagctgcaaa
      661 tttcataact tcatcaggag atggctctat tcggtatgga atggttggaa caccgataat
      721 tttctctccg cataattccg taaaagtgtc atagccatcg tgtaaataat gttcttggct
      781 attacaaata gggcaagtta aattccgccc agtacgttgc gtgataaaat ccgcaaactg
      841 ttcaggttta atgcgtttat tattcatttt aacttccttt ctacccaata aaattcaact
      901 gttagctttg gtggacttta caaatagctt ctatgctcaa cagcgacacc aataatacga
      961 atatcttgtt tcattgagct gagtgttgga aagtcggggt taagcggtat tagctcaaaa
     1021 tgaggattgc cggattcaga ccattcgcct aactcccgat aacgttttaa agtagcctca
     1081 cctgtgccat taaccgctgc tacataatcg cccgggtgag gacgtttgcg aatatcgatt
     1141 aacaccagat cgccttcact aaatttaggc tccatcgaca ttccggaaat tcttaaaaag
     1201 aaagcgtccg gtccggcatc aatttccgta tcgatatagt cgtagccctc cgaatctttg
     1261 aaatcaaagg cttctgtcca taaacccgct tgtatattgc tgatcaacgg atatgagttc
     1321 gattttgtcg gtctggcaag ctgaacgttt gtatcaaaag caagtgtttc tggagaaaca
     1381 ccaagcactt tgctgagtat ttcaatatca tcaagatcgg gagtacgatt gtttctctca
     1441 taattagcaa tgcgagattg cccccatttg ttatttttat ctcgattatc tattgatgta
     1501 catctttcag caacttcata ttggctgatt cctagctgtt ctctgtaagc cttaattcta
     1561 ctacctaagg ttgtcatagc actctcctat tagattttcc tcattttaac acgctccgtt
     1621 atatccttgt gaatcacaaa atgaaattta caattagttc attttgtgat ttaattaaaa
     1681 gatataaatc acaaagagaa atttgtatga ataagatagc tgaaatacga aaccaaattg
     1741 gtataagtca agctcagtta gctgttcaga ttggttgggg gcaaccaaga atagctaact
     1801 atgaaactgg aaatcgtacc ccatctattt acgttgctca aaaaattgtt gagggattga
     1861 acgaattagg tgcaaacgta cgaattgatg acgttttccc cgttggcaac taatttaccc
     1921 caagaggctt gcaatgccac gcaatgaatt aacaaaaaat gcaagagcga ttgcggattt
     1981 gattcatcga aaatccgcaa cggtgacgca taagaaacta gcaagagcaa tcggactgag
     2041 tgaatcacaa tttagccgta catttgcaga taatgtggaa atggtggcgg tgattattga
     2101 ttacttaagt attgagcttg cggataaaga cgagttacta gagctgaaag agaaacgata
     2161 taagcgaata aatctcgaag aagcgacaac atagaagtta ccaacaatga aaaatttttt
     2221 agaaaaattc aaatcattct accacagtaa aaattcaatt tttattagag tggcaatttt
     2281 tatgctgctt gcgtggtggg tttttaacaa ttaaaaaacc accgctggaa cggtggtaat
     2341 ttacaaggag ttaccttttg aaaaatcaac gcaatgatac acaaaaaagc tccttatggc
     2401 aagagtttga atatcgaaaa cggttaaaaa atctcattga aagcggttta tccgtagccg
     2461 aaattgaaac ccgttcacaa caaatttatg aggagctgaa aagtgaatgc acaaccgaag
     2521 caaattaacc caattttaaa attgcaccct aaacaatcag aggctaagaa agtgagtgtt
     2581 gatgatggtt atacacaaat tccgaatgag ttattaaaag caattttgcg atcgggtgtt
     2641 ttaggttgga aaggctctta cttactggct accgtcttaa aaacattgtc ttggcataaa
     2701 gaaagtgatt ggttcacgca ttcccaagtg tgtgaaatga tgaatattga gccgacaaaa
     2761 taccatatta atcaactttc cgctgctcga aaagaactta tccgtgaaaa tatcttgttt
     2821 gaagatggta aggaaacagg ggtaaatctc agtgtttttg aatggaaaat ggtatatccc
     2881 gaaaaagtag ggagttcccg aaataatagg gaattaattc ccgaaaaagt agggaatggg
     2941 tatcccgaaa aagtagggaa cacaaaagaa actattacaa aagaaaaaat aaataatgaa
     3001 tttactaacg taaattctgt gcaacagccc gagacctctt tgccgaaaaa aacaaaatct
     3061 gagccggtcg attatcaagg agtgatggaa gaatttaatc gtgctgtgga agacacaccg
     3121 attccgcaaa ttcgggcgat gagtgatgag cgaaagcgat cggttcacgc attagcaaaa
     3181 atcttgcgaa aagaatttgg tggctacacc agacaacact ttgccgatta cttcaatgat
     3241 tttgtccgac aggcaagtag ccggaaagac agattttatt ttggcgggct tgatggctcg
     3301 gcttgggtag caaatttcgg ctacatcatt cgttcgaaaa cgttttataa gacttgggaa
     3361 gattcgctat gagccaaaat ttgaaaaata tcacttacga ggttgaatat ttgctggttg
     3421 gagcattgct gaaatccggt cttaactcga aagctaggga cgtattgagc tggttagagc
     3481 ctgaaatgtt cgctaccttt caacttgggg tgatttatga ggctatccgc aagcaggcgt
     3541 tgaaagataa cgtgatcgat atgctgttac tcaataccga ctacggacaa gattttgcca
     3601 cgttggcaga gataatgaaa aacacgatca gcggtgcaaa cttagacggc tatgcagaaa
     3661 aagtccggca atatcatcaa cgccgagaag cccagcgagt gtttttagac gttgcaggtg
     3721 agttgcaaaa tgcccgagac gagcagttag atgctatcac ttcaaccggg ttagctcacc
     3781 taagcaaatt attacaacgt ggcggaaaag tgaaaccgat tgatatgaat gatttgctcg
     3841 aaggttattt ggaattgttc caagaacgtg caaaaccaag ttttaaagag cgtttgttgt
     3901 ttaccggtat agaagcatta gatgggaaac taggcggtat taacgatacc gatatttgca
     3961 ttgtagcagg acgtgccggt aacggtaaaa ccgaaacagc catcacgttt actaaaaaca
     4021 ttatcgagaa taaaggttcg gtgctgttct tctcgctgga gatgagcaaa gagcagatta
     4081 tggataggct gattgccagt gcaagcggtg taaattcagt aaaacttcgc aatccggaaa
     4141 tgatgaatga tgaagatttt gcccgaatgg gaacggcgat tcagccttta caaaatcagc
     4201 agttgtacat tgttgataaa agcggattaa ccgcagaaga gattgtggcg attgcagaga
     4261 gccatattca agagtacggc aaagtgagtg cggtagtgat tgattatatc ggtttggttc
     4321 gacacggcaa actagacggc aaaattaacc gaacctatca aatcggtgaa agtatggagc
     4381 ggtttaaaac tttctgcaaa aacaatcaca caccgatgat tttattggca cagcttaacc
     4441 gcaatgcaga tggcagtcgc ccaaccaacg cagatttgcg agacagtggc agtcttgaac
     4501 aagatgcaag ccaaatcatt atggtgcata accaacgcaa caaagacggc gagccagccc
     4561 cctatacaga atggattgtt actaaaaatc gctttggagc aaatggcacg gtttatatgc
     4621 aattccagca gggtaggttc gtagaatgcg accaggcaga agcgcgggag tatttccagc
     4681 cgaaagaaac taaaacatca tcaaacaaac gctatggagc aatgcaatga cagattttga
     4741 taaaaatata aaatacaaaa ttatttacgc agatccgcct tggaagtata aggatagtgg
     4801 ctgtaatggg agtgcagaaa accattacac aacaatgaat atcaaagaaa tatgtgattt
     4861 acccgtccaa gatatttcag acaaagattc tattctgttt ttgtgggtta cttaccctat
     4921 gttacctgag ggcttaaagt tgattgaggc gtgggggttc aactataaaa caatagggtt
     4981 tcaatgggtg aagacaaata agaagaataa gaattctttt ttctttggct tgggacgatg
     5041 gactagaggt aataccgaat gctgtttaat tgcaacaaaa ggaaagccat cgagggtaag
     5101 caataaagtg agccaattaa ttattgagcc aatacaacat catagtaaaa agcctgacat
     5161 tgtcagagaa aagatagttg agttgatggg tgacttgcca agaatagagt tgttcgccag
     5221 aaataaaacc caaggttggg atgtttgggg ggatgaggtg tgattgtttc aagctattgt
     5281 tacccaaagt gcggtagggt tttattaaaa aggttggcgg ttgtgaagga taacgaaggt
     5341 tgggacggtt tagatgatta cttataaatg ccccaaatgc aacggagagc ttgaagattt
     5401 aagtattaat gatgaatggg gttggttttt agatgagccg tatcgttgca acggacacta
     5461 tacagggcgg tttccaaaca ttagccgaga tagcacgtta aatcgcacaa aatcctgtgg
     5521 gtactttagc aaggaagagg ttaagaaagt aaatggcaca cagcgttaat gacatcgtaa
     5581 aagcccacgg caggcgttat aaagcaagat tgaaaataca gatgataaaa atgcaaggag
     5641 gcgttttagt cccccttaat gagcgtgaag ctgaagcatt ggtatcactt aaaaatggcg
     5701 agcaatatga aattgaggtt attcgcactc gcaatccagc ctttcatcgg aaggtcttcg
     5761 cctttttaaa tttttgcttt gaatattggt cggcagacaa aaccgaatgg gagttttttg
     5821 atgagaggaa acagtttgat actttccgaa aaaatctgac tgttctggca ggatttaaag
     5881 aaatcacata caccctagat gggcgtatgc gtgtagaagc tcaaagtctt agttacggaa
     5941 atatggaaca agacgagttc gagcaggttt acaaagcatt gattaatgca gctatcaagc
     6001 acgttttcaa caataccaaa gatgagaata ggataaatca gttgtattcg tttttttaat
     6061 taaggcgaaa tcgccatatt taattaggtt taattgcagg agattaaaat gaaaaagaat
     6121 gttattagat attggcttag cgtgccattc agaattattg cagtgctttt tttcttagtc
     6181 attcttactg ttagatatgt aggttattta ttgatttatc cattagcatt ctttgcagca
     6241 gtcggtagtt ttattgtttt ctgtcaatgg acatatcaag aatggcttta ttattttaag
     6301 cgcggttttg ctccgattta gtgtgtgttt attaattccc tcgaattcgg gggaaggaga
     6361 agtaagatga caaaattttt tgaaactatc gcattcgtga tgttatttgg cattattcca
     6421 agctgtttgt tggcgattaa tactacttta atgaatatga atattaaaaa cgcaccgtgg
     6481 tttatggtga ttattcagtt aggttttaat atcacttgtt attggttgtg gtttatttct
     6541 gttatgcgga atgttattta aggagattaa taagtgagcc agtgcaatga actgactgta
     6601 attttaatcg ccatcgctat tcttagtgta tgtgccggtt cactcttttt tattgagtgg
     6661 tttgataaga gagatggtga gggttggaat ggctaacaaa ccacctaaac aacacaaatg
     6721 caaagagtgc ggcagttatt acatcaaatt tcaaagcacg cagcaggtct gctctgttaa
     6781 gtgtgctatg gcaatgggta agcgtaagac agaggcgaaa cgcaaaaaaa gtgcaaaaat
     6841 cgaccgcttg gagcaacgga agcggctgga aaaattgaaa agccgtagag attttgagaa
     6901 agatttacaa aagatattta ataaattcat tcgcttgcgt gataaagatt taccctgtat
     6961 ttcctgtggc cgctatcatc aggggaaata tgatgcaggg cattataaaa ccgttggtgg
     7021 taatcctgag ctacgtttta atgaagataa ttgccacagt caatgtgtgc cgtgtaaccg
     7081 acatctgcac ggcaatattg tgaattatcg agtaaatctg attgagaaaa tcgggcttga
     7141 gcgtgtggaa tttttagagc gtaaagacca cccaccatta aaacttacta tcgaacaaat
     7201 caaagattta atcaaagtct ataaagcgaa gtgcaaggag cttgagcgtg ttacctagaa
     7261 aaattaaaaa caagtggtta gagcctgaaa agcagaaatg gatcgaagag ttgctaaggt
     7321 tatggggggc gtgggaattt ggcggattgg atttagaaag tcgggtaaat atgatttacc
     7381 ggctgatgaa atctgcggag ggggttaaaa gtctttcatc tagagaggtt tgtaacgata
     7441 gcctcggcac gctgatcaat gagattttta cggtagtcac caaaagagac gtaatgttag
     7501 ccgatatact caaacaaaaa tactggttcg ggcgttcgga gcggcaaatc gctatttatt
     7561 atcaactaag ggacagcgag ggtagaaaag aaagacgatg gcaagaaatt attcaagata
     7621 aatgcaaaaa agcggaaaga attattgcag atattcttga aagcaagatt tcatccagta
     7681 attctacaga taaactgaaa aaatatcaat tttccccttg attttagtgc gtaacaagtg
     7741 tatattttgt gctaatggtg gacgtagtat aaatgatgtt taccaatgtt agttaaagac
     7801 gcagcctgaa gtaatattca gttcggagga gaataactag aaacgacgtc gagtatagtt
     7861 atttcagcgt ttgcgtggca gtatgccgac cgaattagtt taacagccct gagcagaaat
     7921 gcttggggct tttttgttta cggattttaa gggtgtagct cagttggtag agcagcggtc
     7981 tccaaaatcg ttggttgttg gtttgagtcc aaccaccctt tccaaatgcg agtaaatgtt
     8041 atgtataacc ttgatgatgc aattcaagaa tgcagagaaa aatttggtga agataagcct
     8101 tatttttctg aagctggaac acttactttt gctggttgca aagccctctc tcgattaaga
     8161 gatgaaaagt taggaattaa ggctccgcca aatttccctt tcccaagggt tgaagatcta
     8221 tcttagctac aaaaatcaat gagggattgc tatgacggaa caactaaata ctcagtcaaa
     8281 aagcggtgaa gaagatcaag aaaaatctca agatcgctat gccgtgggct ggccatctcg
     8341 acgtatatca gattgcgttc agcacttccg aagtaggaaa atttatccat ttgccagtaa
     8401 taatgacgtg aagcaaggtt aaatgcttct ggtggtacag agtaaattca atcattttta
     8461 ccctctgcta gtttatttgt tggggaacag tattctagca gaatttttaa ccaaagctca
     8521 gtctcacgac tgggcttttt tattgcctcg aaacggggtg gagtatgaag ttaatgaaag
     8581 atatgggaac gcagagctat atttggtcgg gatttagcac ttggctggcg tggctcggcg
     8641 aacagcagaa tttaatgtta cttagtcttg ctatcggtat tgttactgcc attgcagggc
     8701 ttattcagcg atttgatgaa tggcgtaggc gtaagcgtga agatgagcga gcggaagagc
     8761 ttcatcaagc gaaaatggca agattgagaa aggggttaag tgatgagtaa aagccttaaa
     8821 tatggcagtg gtatcgtttg tggtatcgct gccattatta cattagtcca atatcaacat
     8881 cccgaaatcc gcactaacca agctggatta gagattatcg gtaatgctga gggttgcaga
     8941 cgtgatccgt ataaatgccc tgccgatgta atcacggttg gcattggctc aacggagttt
     9001 ggcggtgaaa agattgaccc aaatcgtatt tattctgaca aagaaattgc tgagcgttgg
     9061 gcaaaagatt tgaagattgc ggagagttgt gtcaatcgtc attttaatgg taaagacatg
     9121 aacgataatc aattttcggg aatgacgtcc gctgtattta atatgggttg ttataacatg
     9181 agattttatc ggaataaaca aggtcaatat gtgcagacta ccatccataa actcgcagtg
     9241 aataaacaat ttgaggagat gtgtcatcga ctacctgact ttattcgtgc cagtggtaag
     9301 gtattgaacg gattggttat ccgccgtgaa aaggagaaag cattatgctt aactggatta
     9361 gtggcacgat agccattgtg attttgggct tgtgtgtatg gttatggggt cagtcacaga
     9421 tgatagatag cttaagagct gagaaccgcg cacaagccca aaccattgag cagcagcaaa
     9481 aagccaatca acggctaacc gatagcttag agcaagagcg acaagcggtc gaaaaaatcc
     9541 aaaaaattgc aaatgagctg cggaataaag tggagatggc caagaatgaa attacatcaa
     9601 tactggcaca agacagttgt gctaaagctg atttgcctaa tggcgttgct gatagcatta
     9661 agcggctgca ccagcagaac aatcacaagc actgagtatt tgtatccgcc ggcagcttac
     9721 cttgtgccgt gtgggcgaac agaatttagc ggtagaacct atggcgatac ggttgagtat
     9781 ctcgtcaaag tgatgggaga gcgtgatttg tgtgctaatc aaattgaccg tatcagagaa
     9841 tggcaagcac aaaccaaaca agggtttaaa tagctaatta tctaattaac cgctattgaa
     9901 aatgggagcg taacagctcc ctttttgttt tgatggaaag taaatattac ataatttagc
     9961 tatggtttcg gggttggttg gataaaacac cgaggaaata cctaagtgat gtgatttata
    10021 taaaacaaaa ccccgaacat ttgcggtgtt cgaggttttt ttattaccca ttgaaacgga
    10081 atgagtaaca agttatggaa attattacat ttttaaccgt aaccatcaag gagattctta
    10141 tggaatatgg tttatggcaa ataagcctag cagtaacagt ccctattttg gcgttcgtgt
    10201 cgccaaagct gattaatgct attgctaatc tattaaatgc aatgaagtaa aggaatttaa
    10261 cccaatgact aaaaaaggcg aggttaaagc cacgtctaaa ggcgtgggta aattaaccga
    10321 taaacagaaa cgatttgtag aagagtatct gattgacttg aatgcgactc aagctgcgat
    10381 tagagctggg tacagcgaaa aaacagcata ctcaatcgga gaagagaacc tgagaaaacc
    10441 tgaaatcaga agtgcaattc aggaggctca aaataaacgc tcggagagaa cccaaattac
    10501 acaagatgat gtgctaaatg ggttgcttga agtgattgca atgagtactg gtaaaaaaat
    10561 tgtgacagaa actgatgttg caaaaaatga caatggtgag ttggtcggtt ttgatattgc
    10621 aaaaacaaaa ttcgaacctg ccgccgcaaa taaagctctt gagttactcg gtaaacattt
    10681 aggaatgttt aaagacaagg ttgatttaat taattctgat ggttcactga atcgaccgat
    10741 ggtgattgaa ttaattgctc cgagtttaga cgatgaaagc acagattgaa ctaccaccta
    10801 aactgttgcc tgtttttgcc aaagattatc gttacaaagg tgcttatggt gggcgaggtt
    10861 caggcaagac tcgggcattt gccaaaatgt cggcagtgtc tgcttataaa agagcaatgc
    10921 gaggggaaag tggcgttatt ctttgcggtc gtgagtttat gaactcattg gaagaaagct
    10981 ctcttgaaga agttaaacag gcgatcaagt ctgagccttt tttagcaaat ttttttgatg
    11041 tcggcgagaa gtatgttcgc actaaagatg ggcggatttc ttatgtgttt tccggacttc
    11101 ggcataactt agatagcatc aaatctaaag cccgtatttt gattgcgtgg atagatgaag
    11161 cagaaacagt aagcgaaact gcttggcgga aattaattcc aaccgtgcgt gagaataatt
    11221 ccgaaatatg ggtaacttgg aacccggaaa atagagggag cgcaacagat actcgcttca
    11281 ggcaaaatcc acctgaaaac agctgcataa ttgaaatgag ctaccaagat aatccttggt
    11341 ttcctgatgt gctcgagcaa gagcggctaa atgacaaaca gcggcttgat gatgc
//
LOCUS       DANLXO010000089        11283 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.089, whole genome shotgun sequence.
ACCESSION   DANLXO010000089 DANLXO010000000
VERSION     DANLXO010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11283
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.089"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            282..1826
                     /gene="leuA"
                     /locus_tag="PXD69_002040"
     CDS             282..1826
                     /gene="leuA"
                     /locus_tag="PXD69_002040"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDL6284199.1"
                     /translation="MSNNNIIIFDTTLRDGEQSLKASLTVKEKLQIALALERLGVDVM
                     EVGFPVSSAGDFESVQTIARHIKNSRVAALSRAVAKDIDAAYEALKVAEAFRIHTFIA
                     SSALHVEAKLKRSFDDVVEMAVAAVKRARNYTDDVEFSCEDAGRTGIDNICRIVEAAI
                     NAGATTVNIPDTVGFCLPNEYGNIIHQVMNRVPNIDKAIVSVHCHNDLGMATANSLTA
                     VQNGARQIECTINGIGERAGNTALEEVVMAIKTRQEFMGVDTRINTQEIHRVSQMVSQ
                     LCNMPIQPNKAIVGSNAFAHSSGIHQDGMLKNKNTYEIMSPETIGLKKEKLNLTARSG
                     RAAVKGHMADMGYTETDYDLDKLYEAFLQLADKKGQVFDYDLEALAFIDMQQGDEDRL
                     KLDVITTQLISGLPASAFVQVELDGVRQSATSQGGNGPVEATYNAIMNIVGMELKMSH
                     YNLTAKGEGAEALGQVDIVVEYEGRKFHGVGLATDIVESSARALIHAINAIYRSQKVA
                     DLKAKK"
     gene            2048..2620
                     /gene="rpoE"
                     /locus_tag="PXD69_002041"
     CDS             2048..2620
                     /gene="rpoE"
                     /locus_tag="PXD69_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000003307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HDL6284200.1"
                     /translation="MSEQITDQELVEKAQKGDKKAFNLLVVRYQNRVAGLLTRYVARD
                     DIPDIVQESFIKAYRSLESFRGESAFYTWLYRIAVNTAKNHLTSLGRRPPKEDILAED
                     AESYDVGAQLRESDTPENLILSEELKKVVFDTIENLPDELKTAIRLRELEGLSYEEIA
                     EVMECPVGTVRSRIFRAREAIDAKIKPLMQ"
     gene            2666..3289
                     /locus_tag="PXD69_002042"
     CDS             2666..3289
                     /locus_tag="PXD69_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6284201.1"
                     /translation="MQERITQQNERLSAYMDGQNVDTAFVETLTNSPELQQKWASYHT
                     IRSVMQGDEIILGRDFSAKMEALLENEEIESQANVEKPKGLLLKLKRWGTPIMQAGIA
                     ASVCLVAVLGVNSMNASDEIAQTQQPVLQTLPFSNSVEAVSYNAPVQDQPTEEQLELQ
                     QRKINALLENHELQRRTNNVKNLTLSEEEKQKAQTSSNTESEPNIQK"
     gene            3447..4430
                     /locus_tag="PXD69_002043"
     CDS             3447..4430
                     /locus_tag="PXD69_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HDL6284202.1"
                     /translation="MLFKIKKYLLLFWVISACYTFAWAESTIKTPLAYLTAMSEAHKK
                     STYELVYILQQGSDTESFRLRHAFTHNKEYAQLLNLDHSREEIILKNNKVSYLGYNFR
                     PFSLNSSQILDNLPNVLYTDYANLKGYAFLDAGKDRISDRITKVIRMKPNDTLRYAYI
                     LWIDEETHLLLKSQVLNMDNLVLEEFRVLQLYQSPELDRIANVIESLMLPTLTTVKKE
                     EFPKSDGWQVKWLPTGFRLIQQQTVTGATYQVESEYVDSRVYSDGLSTLTIYIMPSQG
                     VSFNEYAWQQGKLTILNQTINDRDIVIIGDVPLQSAKQIMNNIGFKEGAQP"
     gene            4427..4891
                     /locus_tag="PXD69_002044"
     CDS             4427..4891
                     /locus_tag="PXD69_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR reducing system RseC family protein"
                     /protein_id="HDL6284203.1"
                     /translation="MMIEQATVVEYQNGVAIVQCYAKSSCGGCVAQSACGSKALSALA
                     GEKIDPRFRIEVDEPLKVGDKVELGLAENILLKSVFLIYGIPLLVLVMTAVGFSQFFA
                     NELIVLFIMLLSTGITFWAVRKLIHKHSKQANFSPIFLGKVLGDYNGKNMAK"
     gene            4869..6554
                     /gene="fadD"
                     /locus_tag="PXD69_002045"
     CDS             4869..6554
                     /gene="fadD"
                     /locus_tag="PXD69_002045"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HDL6284204.1"
                     /translation="MEKIWLNNYPPYSPKTIETDQYESLVEMFEAAIQRHPDIPAYIN
                     MGQVLTFRKLEERSRSFAAYLQNELRLKKGDRIALMMPNLLQYPIALFGALRAGLVVV
                     NVNPLYTPRELEHQLNDSGAKAIVIVSNFAATLEKIVFNTEIKHVILTRMGDQLSFGK
                     RTLVNFVVKYIKKLVPKYKLPHAVSFREALSIGKQRQYVKPNIVSQDLAFLQYTGGTT
                     GVAKGAMLTHQNLIANMMQAKWIVEPLLGNSANMIGLVPLPLYHVLALSMNCLLFIEL
                     GLTGLLITNPRDIPGFIKELKKYKVSVITGVNTLFNALLNHESFKEVDFSHLKLSVGG
                     GAAIQSSVAKRWHDLTGVHIIEGYGMTECSPLISATRGDSVEYSGSIGVPVPNTDIRI
                     VDDEGKEVPLGERGELVVKGPQVMQGYWNRPDETAQVLQDGWMATGDIVVMGDDLNLR
                     IVDRKKDMIIVSGFNVYPTEIEEVISQNPKVNEVVAIGVPSEASGESIKIFVTKKDES
                     LTRDELRTYCRQFLTGYKIPRDIEFRDELPKSNVGKILRRVLRDEELAKVNKA"
     gene            6579..7208
                     /gene="upp"
                     /locus_tag="PXD69_002046"
     CDS             6579..7208
                     /gene="upp"
                     /locus_tag="PXD69_002046"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDL6284205.1"
                     /translation="MKIVEVKHPLVKHKLGLMREAEISTKDFRELANEIGSLLTYEAT
                     KDLEMESVEINGWSGEKIAVERIKGKKVTVVPILRAGLGMMDGVLEHIPSARISVVGI
                     YRDEETLKPVPYFSKLANDVDERLAIITDPMLATGGSMVATIDLLKKAGCKQIKVLVL
                     VAAPEGIKVLEAAHPDVELYTASIDSHLNENGYIIPGLGDAGDKIFGTK"
     gene            complement(7319..8185)
                     /gene="rsmA"
                     /locus_tag="PXD69_002047"
     CDS             complement(7319..8185)
                     /gene="rsmA"
                     /locus_tag="PXD69_002047"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDL6284206.1"
                     /translation="MSSTNSKKHLGHTARKRFGQNFLHDMNIIHSIVSAINPKNGQFL
                     LEIGPGLGALTEPVAELVDKLTVVEIDRDLAERLRHHPFLNQKLTIIEQDALRFNFRD
                     YFNQLNLDEDSVRVFGNLPYNISTPLIFHLLTFHDLIQDMHFMLQKEVVKRLCAAPNS
                     KAYGRLTIMAQYYCQVIPVLEVPPTAFKPAPKVDSAVVRLVPYNQLPYPAKDVYWLNR
                     VTTQAFNQRRKTLRNALSTLFSAEQLDALGVDLTARAENLTIADYVRLANWLHDNPPA
                     IDTTEELVDEDC"
     gene            complement(8247..9197)
                     /locus_tag="PXD69_002048"
     CDS             complement(8247..9197)
                     /locus_tag="PXD69_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL6284207.1"
                     /translation="MKMKLVKSLFAVAVATMSLTQTAHAFEERVVALVNDTPIMQSQV
                     QRVLGKKKATETAQRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITY
                     GQLLDALDYQGITLEQFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDK
                     AAGKLKTVSGKEHRISHILLKTNPILNDAQAKAKLSSLTTDINSGKISFEEAAKTHSV
                     DYASGADGGDLGFNFLEIYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRNGDR
                     TEDAYHQRAYQQLVNKQAEEASKDWVKALRKTANIQYVGQ"
     gene            complement(9270..9824)
                     /gene="pyrR"
                     /locus_tag="PXD69_002049"
     CDS             complement(9270..9824)
                     /gene="pyrR"
                     /locus_tag="PXD69_002049"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDL6284208.1"
                     /translation="MAREKIIIDTEQFQRTISRISHQIIEKHGDLQDVVIVGIKRRGA
                     EIAELIQKRIEDLAQTRLPYMALDITFYRDDLDLIYQDPVFMGADNQLNLNGKKVILV
                     DDVLFTGRTIRAALDALLDFGRAARIELVIFVDRGHRELPIRADYVGKNIPTAKNEQI
                     QVQTLSYDGINQVVLVPAANKESA"
     gene            complement(9838..11265)
                     /gene="hldE"
                     /locus_tag="PXD69_002050"
     CDS             complement(9838..11265)
                     /gene="hldE"
                     /locus_tag="PXD69_002050"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HDL6284209.1"
                     /translation="MMMQYSPKFNNAKVLVLGDVMLDRYWFGATNRISPEAPVPVVKV
                     QDIEERAGGAANVAMNIASLGVPVTLHGLIGDDDAGRALDKLLNSHQIQNHCVVINSH
                     PTITKLRILSRHQQLLRLDFEEGFHNVDSTALLAKLSQEITAYGALILSDYGKGTLES
                     VQQMIQIARNAKVPVLIDPKGTDFERYRGATLLTPNMSEFEAVVGHCKDEDEIVSKGL
                     KLIADYDLSALLVTRSEKGMTLLRPNHEPYHLPTQAKEVYDVTGAGDTVISVLATAIA
                     DGRAYEEACYLANAAAGVVVGKLGTSTVSPVELENAIHQRTATGFGVVSEAELKAIVE
                     EAKKRGEKIVMTNGCFDILHPGHVSYLENARKLGDRLIVAVNTDASVKRLKGEARPIN
                     DLAARMAVLAGLASVDWVVPFDEDTPQRLISEILPDLLVKGGDYKPEEIAGSQEVWAN
                     GGDVRVLNFENGCSTTNVIKKIQAL"
BASE COUNT         3442 a         2143 c         2438 g         3260 t
ORIGIN      
        1 gacttgaatt aatgggctgg taaacggttg cgtgaagaga aaaatgctat tgacattgat
       61 ttggataagg ataatataca cctcaactac tgaataacaa tgcaaacata aacatacaac
      121 acaacatgga aaaatttacc ttactccgat tatctctgtt atcgtatttt gtgcgaggat
      181 aaagattgat tggaaaaagt aaatggacta tccacattct tgcccgcacc ttaaaatgcg
      241 ggcttttttt atcaaataaa aacacctaaa aagaggcttc tatgagcaac aataacatta
      301 ttatttttga tacgacttta cgtgatggtg agcaatcatt aaaagcaagt ttaaccgtaa
      361 aagaaaaatt gcaaattgcc cttgctttag aacgtttagg ggttgatgtg atggaagtcg
      421 gttttccagt ttcttcagcg ggcgattttg aatcagtaca aaccatcgct cgtcatatca
      481 aaaacagccg ggtggcggcg ctttcccgag cggttgcaaa agacattgat gcagcttatg
      541 aagccttaaa agtagcagaa gcattccgta tccatacctt tattgccagc tcggcattac
      601 acgttgaggc taaattaaaa cgttcatttg atgatgtagt cgaaatggcg gttgcagcgg
      661 taaaacgcgc cagaaattat actgatgatg ttgagttttc ctgtgaagat gctgggcgta
      721 ctggaattga taacatctgc cgcattgtag aagctgccat taatgccggt gcaaccacag
      781 tgaatattcc ggatacagtc ggtttctgtt taccgaatga atacggcaat attatccacc
      841 aagtgatgaa ccgtgttccg aatatcgata aagcgattgt ctctgttcac tgccataacg
      901 atttaggtat ggctaccgcc aactcattga cagcggtgca aaacggagcg agacagattg
      961 agtgtactat caacggtatt ggcgaacgtg ccggtaacac cgctcttgaa gaagtggtaa
     1021 tggcaattaa aacccgccaa gaatttatgg gggttgatac ccgcattaat acccaagaaa
     1081 ttcaccgtgt cagccaaatg gtcagccagc tttgcaatat gccgattcag ccgaacaaag
     1141 cgattgtcgg tagcaatgcc tttgctcact cttcaggtat tcaccaagac ggtatgctga
     1201 aaaataaaaa tacttatgaa attatgtcgc cggaaaccat cggcttgaaa aaagagaagc
     1261 tgaatttaac tgcccgttca ggtagagcag cggtgaaagg gcatatggct gatatgggtt
     1321 atacggaaac ggattacgat ttagataaac tttatgaggc cttcttgcaa cttgctgata
     1381 aaaaagggca agtgtttgat tatgacttag aagctcttgc cttcattgat atgcagcaag
     1441 gcgatgaaga ccgcttaaaa ttagatgtaa ttaccaccca actaatcagc ggtttaccgg
     1501 cttcggcttt tgtacaggtg gaattagacg gcgttcgtca aagtgctaca tctcaagggg
     1561 gaaatggtcc agttgaggca acttacaatg ccattatgaa cattgtggga atggagctaa
     1621 aaatgtcgca ctataatctg actgcgaaag gcgaaggagc agaagcatta gggcaagtgg
     1681 atattgtagt ggaatatgaa ggtcgaaaat tccacggtgt gggtttggca accgatattg
     1741 tggaatcttc agcccgagct ttaattcacg ccattaatgc gatttaccgt tcacaaaaag
     1801 tggcagattt aaaagcgaag aaataactta tagagcgaaa gcataacata gacaagcggt
     1861 cggatttttt gaaatttttg caaaatttcg ctaaaatccg accgcttgct tagtttatta
     1921 agtaggtttt atctaggaat gtaaaaaatt acacaatttt tcaaattttt tgaacttttg
     1981 tcataaagca cacactaaca aagtgtgcaa tggaaaatga catattgata tttaggagag
     2041 tccgcagttg agcgaacaga tcaccgacca agaattagtc gaaaaagcac aaaaaggtga
     2101 taaaaaagca tttaatttac ttgttgtacg ttatcaaaat agagtagccg gtttgctgac
     2161 tcgttatgtt gcaagagatg atattccgga cattgtgcaa gaatctttta ttaaagccta
     2221 tcgttcttta gagtctttcc gtggcgaaag tgctttttat acgtggcttt atcgcattgc
     2281 agtgaatact gcgaaaaatc atttaacctc tttaggcaga agaccgccaa aagaagatat
     2341 tcttgccgaa gacgctgaaa gttatgatgt aggcgcgcaa cttcgtgaaa gtgatacgcc
     2401 agagaatttg atattatccg aggaattaaa gaaagtcgtg tttgatacga ttgaaaattt
     2461 acctgatgag cttaaaaccg ccattcgttt aagagaattg gaagggctaa gttacgaaga
     2521 aatcgcagaa gtgatggaat gtccggttgg tactgtacgt tcccgtattt tccgagcaag
     2581 ggaagcgatt gatgctaaaa tcaagccact tatgcaatag atagaaagat tattttagaa
     2641 gagatttaaa tcattggagt caattatgca agaacgcatc actcaacaaa atgaacgcct
     2701 ttcagcttat atggatgggc aaaatgttga tacagcattt gtagaaacat taactaacag
     2761 ccctgaatta cagcaaaaat gggcaagtta tcacactatt cgtagtgtga tgcaaggtga
     2821 tgagatcatt ttagggagag atttctctgc taaaatggaa gcattactgg aaaatgaaga
     2881 aattgaatct caagcaaatg tagagaaacc taaaggctta ttgctcaagc tcaagcgttg
     2941 gggaactcca attatgcaag ccggtattgc agcttcagtg tgcttagttg cggtattagg
     3001 ggttaattca atgaatgcga gtgatgaaat agctcaaacg caacaaccag tattacaaac
     3061 attgccattt agcaattcag ttgaagcggt aagttataat gcgccagttc aagatcaacc
     3121 aacagaagaa cagttagagc ttcaacagcg taagattaat gcgttattag aaaaccatga
     3181 gttacaacgc cgtactaata acgttaaaaa tttaacctta tctgaggaag aaaagcaaaa
     3241 agcacaaact tcttccaata cagaatcaga gccaaatata caaaaataat aggtaaaata
     3301 agttactgaa agccacataa tttatccata attatgtggc tttttgtatg taaatgtagc
     3361 gaaaaaataa gaaataacca acaagtagcg aaatagtgaa aattttttgc taaaataacc
     3421 taagttaatt tggcttgaga ataaatatgc tttttaagat aaaaaaatac ttattgttgt
     3481 tttgggttat ttctgcctgc tatacatttg cttgggcaga atcaactatt aaaacaccat
     3541 tagcatattt aacggctatg tcagaagcac ataaaaaatc cacttatgaa ttagtttata
     3601 ttcttcaaca gggaagtgat acagaatctt tccgtttacg tcatgctttt acccataata
     3661 aagaatatgc ccaattactg aatttagatc acagccgaga agaaattatt ttaaaaaata
     3721 acaaggtcag ctatttgggg tataattttc gtccttttag tttaaatagt tcacagattt
     3781 tagataacct ccctaatgta ctttacacag attatgcaaa tttaaaaggt tatgcctttt
     3841 tagatgctgg taaagatcgt atttctgacc gaattacaaa ggtaattcgt atgaagccaa
     3901 atgatacttt aagatatgcc tatatactat ggattgatga agaaacacat ttattactta
     3961 aaagccaagt cttgaatatg gataatttgg tattagaaga attcagagtt ttgcaacttt
     4021 atcaatctcc agaattggat aggattgcaa atgtaataga atcactaatg ttaccaacat
     4081 taacgacagt gaaaaaagaa gaatttccta agtctgatgg ttggcaggtg aagtggttgc
     4141 cgacagggtt taggttaatt cagcaacaaa cagtcacagg tgcgacatat caagtggaaa
     4201 gtgagtatgt agatagcaga gtatatagtg atggtttatc tacattaact atttatatta
     4261 tgcctagcca aggcgtgagt tttaatgagt acgcttggca acaaggtaaa ttaacgattt
     4321 taaatcaaac gattaatgat agagatattg tgattattgg tgatgtgccg ttgcaatcgg
     4381 ctaagcaaat tatgaacaat attggtttta aggaaggagc tcagccatga tgatcgaaca
     4441 ggctacggtg gtggaatatc agaatggtgt ggctattgta caatgttatg ctaaaagtag
     4501 ctgtggtggc tgtgtagctc agtctgcttg tggcagcaaa gcattatcag cattagcagg
     4561 tgaaaaaatt gaccctcgtt ttcgtattga ggtagatgaa cccctaaaag taggcgataa
     4621 ggttgaacta gggttagctg aaaatatctt gctcaaaagc gtgtttttaa tttatggcat
     4681 tcctctgctg gttcttgtga tgacagcggt cggattttcg caattttttg caaatgagct
     4741 tattgtttta tttataatgt tgctttcaac aggtataaca ttctgggctg taagaaaatt
     4801 gattcataaa cacagcaaac aagcaaattt ttcacctatc tttttaggta aggttttagg
     4861 agactataat ggaaaaaata tggctaaata attatccgcc ttattcacca aaaacgattg
     4921 aaacagatca atatgaatct ttagtggaaa tgtttgaagc agcgatacaa cgccaccctg
     4981 atattccagc ttatattaat atggggcagg ttttaacgtt ccgtaaattg gaagaacgta
     5041 gccgctcgtt tgccgcttat ttgcaaaatg aattacgcct gaaaaaaggt gatcgaatcg
     5101 cattgatgat gccgaattta ttgcaatatc cgatcgcttt atttggcgca ttacgtgccg
     5161 ggcttgtggt ggtgaatgtc aacccgcttt atacgccgcg tgaattagaa catcaattaa
     5221 atgacagtgg tgcgaaagcg attgtgatag tctcgaactt cgcggctacc ttagaaaaaa
     5281 ttgtctttaa tactgagatt aagcacgtta ttttgacccg aatgggcgac caactttcat
     5341 tcggcaaacg caccttagtc aattttgtgg tgaaatacat caaaaaatta gtgccgaaat
     5401 ataaattgcc acatgcggtc agcttccgtg aagccttaag cattggcaaa cagcgtcaat
     5461 atgtaaaacc gaatattgtc agccaagatc tcgccttttt acaatacact ggcggtacta
     5521 caggtgtagc gaaaggggca atgctgactc atcaaaactt aattgctaat atgatgcagg
     5581 caaaatggat tgttgagcca ttgttgggta attctgccaa tatgattgga ttggtacctt
     5641 taccgctgta tcacgtctta gcactttcga tgaattgctt gctctttatc gaattaggac
     5701 ttaccggatt attaattact aatccgcgcg atattccagg ctttattaaa gaattaaaaa
     5761 agtacaaagt ttcagtgatt actggggtaa atacattgtt taatgcatta cttaatcacg
     5821 aaagttttaa agaggttgat ttttcacacc taaaattaag tgtaggtggc ggtgcagcga
     5881 tccaatctag cgtggcaaaa cgctggcacg atttaaccgg cgtacatatt atcgaaggtt
     5941 atggaatgac agaatgttct ccgctgatta gtgcaacccg tggcgattcg gtggaatatt
     6001 ccggctctat tggcgtgcca gtgccaaata ctgacattcg tattgtggat gatgaaggca
     6061 aagaagtacc actcggcgaa cggggcgagc tggtggtgaa agggccgcaa gtaatgcaag
     6121 gctattggaa ccgtcctgat gaaacggcac aagtgctaca agatggttgg atggcaaccg
     6181 gtgacattgt ggtaatgggg gatgatctga acttacgcat tgttgatcgt aaaaaagata
     6241 tgattattgt ctccggtttt aatgtgtacc caaccgaaat tgaagaagtg atttcccaaa
     6301 acccaaaagt gaatgaagta gtggcgattg gtgtgccgag tgaggcttcc ggcgaaagca
     6361 ttaaaatttt tgtaaccaaa aaagatgaaa gtttaactcg agatgaattg agaacctatt
     6421 gtcgtcaatt cttaaccggc tacaaaattc caagagacat cgaattccgt gacgaattac
     6481 caaaaagtaa tgtcggcaaa attcttcgcc gagtgttaag agacgaagaa ttagcaaagg
     6541 tgaataaggc ttaaattaca ctaattaagg agcttaaaat gaaaattgtt gaagtaaaac
     6601 acccacttgt aaagcataaa ttgggcttaa tgcgtgaagc ggaaatcagc accaaagatt
     6661 tccgtgagct agcgaatgaa attggtagtc tgcttactta cgaagcaacc aaagatctgg
     6721 aaatggaaag tgtggagatc aatggctgga gcggagagaa aattgcggtt gagcgaatta
     6781 aaggcaaaaa agtgactgtt gtgccgattc tgcgtgctgg cttaggtatg atggacggtg
     6841 tgttagagca tattccaagt gccagaatta gtgtggttgg gatttatcgt gacgaagaaa
     6901 ccttaaagcc cgtgccgtat ttctccaaac tagccaacga tgttgatgag cgtttagcca
     6961 ttatcaccga cccaatgctt gcaaccggtg gctcaatggt agcaaccatt gacctcctga
     7021 aaaaagcagg ctgtaagcag attaaagtgc tagtgttagt tgccgctcca gaggggatta
     7081 aagtattaga agccgcccac ccagatgttg aactctacac cgcctcaatc gatagtcact
     7141 taaacgaaaa cggctatatc attccaggct taggcgatgc aggggataaa attttcggca
     7201 ccaagtaaca tcaaaactaa gtaacagcaa aacaagtaaa gctgatttaa acaagcggcc
     7261 atttttcact aaagatttgc aaatcttggt agaaaaatga ccgcttgtaa tttattgatt
     7321 agcaatcttc atcaaccaat tcttcggttg tatcaattgc cggcgggttg tcgtgtagcc
     7381 agttagccaa acgcacataa tcggcaatgg taaggttttc cgctcgggcg gttaaatcaa
     7441 cgcctaaggc gtccagttgc tccgcactaa acagggttga aagagcattg cgtaaggttt
     7501 tacggcgttg gttaaaggct tgagtcgtga cccgattgag ccaatacaca tcttttgccg
     7561 gataaggcag ttggttataa ggcactaaac gcactaccgc agaatcgact tttggtgccg
     7621 gtttaaaggc ggttggcggc acttccagca ccggaattac ttggcaatag tattgagcca
     7681 taatggttaa acgcccgtat gctttactgt ttggcgcggc acataaacgt ttcaccacct
     7741 ctttttgcaa cataaagtgc atatcttgaa ttaagtcgtg aaaggtcagc aggtggaata
     7801 tcaagggcgt agaaatgttg taaggtaagt taccaaacac acgcaccgag tcttcgtcta
     7861 agttgagttg gttaaaatag tcacggaaat taaagcgtag ggcatcttgc tcaataatgg
     7921 tgagtttttg gtttaaaaac gggtggtggc gtaaacgctc tgctaaatca cggtcaattt
     7981 caaccaccgt gagtttatct accaattcgg caaccggctc ggttaatgct cctaaacccg
     8041 gaccgatttc taataaaaat tgtccgtttt tcgggttaat ggctgaaact atgctgtgaa
     8101 taatgttcat atcgtgcaaa aagttttgcc cgaaacgctt acgagcggta tgacctaaat
     8161 gttttttgga atttgtagaa ctcattgtta tcctttttga aataagaaaa gaaccccgca
     8221 ttatgcgagg ttcttaaaaa ttttaattat tgaccgacat attgaatatt ggcggttttt
     8281 ctaagcgctt ttacccaatc tttagaggct tcttcggctt gcttgttcac cagttgctga
     8341 taagcacgtt ggtggtaagc atcttcggtt ctgtctccgt tacgagtgtc ggtgactttt
     8401 aaaatatgcc aaccaaattg cgatttaaac ggagcagaaa tttggtttgg tttgattttt
     8461 gatgcaacat tcgcaaatgc cggatcgtaa atttctaaga agttaaaacc taaatctcca
     8521 ccgtctgccc ctgaggcata atcaacagaa tgggtttttg ccgcttcttc aaagctgatt
     8581 ttgcctgagt taatatcagt agttaagctg ctaagttttg ctttggcttg agcatcattt
     8641 aaaatcgggt tggttttgag caaaatatga ctaatgcgat gctctttgcc agaaacggtt
     8701 ttcaatttgc ctgctgcttt atctttcgcc attaactctt tcgccagagc ttgcacttgc
     8761 tgtggtgcaa cctgaatcga tttgctaatg ctgatatggc gaacttgttc cattgccatt
     8821 tgttgagcaa tattacgttt gaattgttca agtgtaatac cttgataatc taacgcatct
     8881 aataactgac cgtaagtaat gccgttttga attgctacat tttcaaccgc ttggtttacc
     8941 gcagctgggc tgactttaac gccggcttct ttcattgcct gttgcaccaa catatcatca
     9001 atcacttgat caatagccgc acgttgagca gtttctgtcg cctttttctt gccaagcaca
     9061 cgttgaacct ggctttgcat aataggggta tcattcacta acgccaccac tctttcttca
     9121 aatgcgtggg cggtttgggt aagactcatt gttgcaacgg caacagcaaa taatgatttg
     9181 actaatttca tttttataac aatcctaatg gaggtaatta agcagtaact tttccttaga
     9241 gataagttta gcgaaaaggt tcacttaatt taagcacttt ctttattggc agcaggaact
     9301 aagaccactt ggttaatccc atcatacgag agcgtttgca cctgaatttg ctcgttttta
     9361 gccgttggaa tattttttcc gacataatcg gctcggatag gcaattcccg atgacctcta
     9421 tcgacaaaaa tcaccagttc aattctggca gctctgccaa aatctaagag tgcatcaagt
     9481 gccgcccgaa tggttctgcc ggtaaacaga acatcatcaa ccaaaatcac ttttttaccg
     9541 ttcagattta gctgattatc ggctcccata aatacgggat cttgataaat taagtctagg
     9601 tcatcacggt agaacgtaat atctaacgcc atataaggca agcgtgtttg agctaaatct
     9661 tcaatgcgtt tttggattaa ctcggcaatt tcagctcctc gacgtttgat gccgacaatc
     9721 actacatctt gcaaatcacc gtgtttttca ataatttgat gtgaaatacg agatattgtg
     9781 cgctgaaatt gctcggtatc aataatgatt ttttctctcg ccattcgctt attaccatta
     9841 tagtgcttga attttcttga tcacattagt ggtagaacag ccgttttcaa agttcaatac
     9901 tcgcacatcg ccgccgtttg cccatacttc ttggctgccg gcaatctctt ccggcttgta
     9961 atcaccacct tttaccaata aatcaggtag gatttcactg attaaacgtt gtggtgtatc
    10021 ttcatcaaaa ggcacaaccc aatctacaga ggctaaacca gctaaaactg ccatacgggc
    10081 agctaaatca ttaatcgggc gagcttcgcc ttttaggcgt tttaccgaag catcggtatt
    10141 gacggctaca attaatcggt cgcctaattt acgggcgttt tccaaatagg aaacgtgacc
    10201 ggggtgaaga atatcaaagc aaccgttcgt catcacgatt ttttcgccac gttttttcgc
    10261 ttcttccaca atcgctttta attcggcttc agaaaccacg ccaaaaccgg tggcagtgcg
    10321 ttggtgaatc gcattttcca gctcaaccgg gctgacggtt gaagtcccta atttacctac
    10381 gactacaccg gcggcagcat tggctaaata gcaggcttct tcataggctc tgccatcggc
    10441 aatcgcagtg gctaatacac tgattacggt atcgcctgca ccggttacat cataaacctc
    10501 tttggcttgg gtcggcagat gataaggctc gtggttcggg cgaagtaagg tcattccttt
    10561 ttccgaacgg gtaactaata gtgcagataa atcatagtcg gcaatcagtt ttaacccttt
    10621 gctgacaatc tcatcctcat ctttacaatg cccaaccacc gcttcaaatt ccgacatatt
    10681 tggtgtaagc aatgttgccc cacgatagcg ttcaaagtct gtgcctttcg ggtcgatcag
    10741 caccggcacc ttagcattgc gggcaatttg gatcatttgt tgcaccgatt ccaatgtgcc
    10801 tttgccgtaa tccgagagaa ttaatgctcc gtaagcggta atttcttgcg aaagttttgc
    10861 aagtagggcg gtagaatcta cattgtgaaa accctcttca aaatccaacc gcaataattg
    10921 ctgatggcgg gaaagaatcc gcaattttgt gatggttggg tgcgaattaa tcaccacaca
    10981 atgattttgg atctggtggg aattaagtaa tttatctaaa gcacgcccgg catcatcatc
    11041 gccaattaag ccgtgtaatg ttaccggtac gccaaggctg gcgatgttca tcgccacgtt
    11101 tgccgcaccg ccggcacgct cttcaatatc ttgtactttc accaccggca caggggcttc
    11161 aggcgaaatt cgattggttg ccccgaacca gtaacggtct aacattacat cgccaagcac
    11221 cagcacttta gcattattaa attttggaga gtattgcatc atcatagtta atattctctg
    11281 tta
//
LOCUS       DANLXO010000090        11168 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.090, whole genome shotgun sequence.
ACCESSION   DANLXO010000090 DANLXO010000000
VERSION     DANLXO010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11168
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.090"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            61..1857
                     /locus_tag="PXD69_002051"
     CDS             61..1857
                     /locus_tag="PXD69_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate-specific subunit IIBC"
                     /protein_id="HDL6284210.1"
                     /translation="MDFLTEILLFLKDQVLNKAPFLLGIVACLGYILLKKDTSTIIKG
                     TIKTIVGFMIVQAGSGFLVTNFKPVIDGLAKYHQLTGAVIDPYTSMQSTIQTMGENYA
                     WVGYAVIGALFLNILLVVFRRLTGIRTIMLTGHIMFQQAGLVAVFYMIIGASMWETII
                     YTSVLMALYWGISSNIMYKPTQAVTGGAGFSIGHQQQIASWIAVKLAPKLGDKDDTVD
                     KMKLPNWLNIFHDSISATALVMTIFFGIILLSFGLDNLKELAGKTNQFMYILEMGLKF
                     AVAIQIIVTGVRMFVAELSEAFKGIAERLIPNSVLAIDCAAIYAFSPNAMVFGFMWGA
                     IGQFVAVGGLLAVGSPVLIIPGFIPMFFSNATIGVFANQFGGWKAVMKICFVMGIIEV
                     LGSAWVIQMLASQGTTFNGWMGMADWALFFPPILQGIISIPGFFFVIVAAAMVYMFFA
                     SKQLRAEEAEAAARGITLEQLDGYGLDEVKAEPKAEAVVQQAVENAENSANPIRILAV
                     CGSGQGSSMMMKMKIKGYLDKRGIPNIMDSCAVTDYKGKLSEVDIIVSSKHLANEIEV
                     PEGKAVLGVQNMLNPNSFGDELVELINQHNAK"
     gene            1937..2998
                     /locus_tag="PXD69_002052"
     CDS             1937..2998
                     /locus_tag="PXD69_002052"
                     /inference="COORDINATES: protein motif:HMM:NF012376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL6284211.1"
                     /translation="MKKILSTLFMLSAVSVAVAKEVNIKLLGTSDVHGRVVPWSYGAD
                     VEDKSGSFAQIATYVKEVRANHKNVLLFDIGDAIQDNQVEEFAKTLDKAKNNPVPKVL
                     NAMNYDIFILGNHEFNFGMPNLDAILKDINAKILTANFYHKDGKRYVEPTTIIERDGV
                     KLGIIGLTTPMSAIFEKDTGHLDAMKFTSPIEEAKAQIADLKAKGVDAIIVLAHMGIE
                     NENNIPDTGVADLVNAVDGIDVIIAGHMHKDVPSETIKNTLITEPHRYGTVVSEVDLA
                     FDVNDKGEVKLLSKTAKTVPVKKLASDPEIEKIYQPYHNELRALNNVKIGETAQDLIP
                     QGKITVYRLLSRKTPECPH"
     gene            2986..3450
                     /locus_tag="PXD69_002053"
     CDS             2986..3450
                     /locus_tag="PXD69_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HDL6284212.1"
                     /translation="MSSLIHDVQQHYSGADVVSFAFDYETVRLDKGDIKKKDIIYNYR
                     YAGGDVSMYELTGKQLKQYMEWSADYFDTIQAGDKDYRYNAVRGKSKYVTFDLFGGVS
                     YNIDLRNPSGSKIVDLKLANGSLITDDGKYKVGMNSYRFGQLTKKGGIWEGQ"
     gene            3481..3597
                     /locus_tag="PXD69_002054"
     CDS             3481..3597
                     /locus_tag="PXD69_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ser/Thr protein phosphatase"
                     /protein_id="HDL6284213.1"
                     /translation="MGAEKGTIQNMLIDYITNVKGGKIEGKSHNRWAIIGLN"
     gene            3613..4080
                     /locus_tag="PXD69_002055"
     CDS             3613..4080
                     /locus_tag="PXD69_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL6284214.1"
                     /translation="MNLKQSLIENNSILLNQSAANWEDAIKIGTDLLVKAGTIEPRYY
                     DNIVSKIKEMGPYIILAPGLAMPHARPEEGVIKTSFALVTFDTPIYFEGEDEPVHVML
                     TLAGSDSDQHMQGLVEITQVLDDPESDTGVDLDKIRRCKTAEEVYAVIDQALA"
     gene            4135..4815
                     /locus_tag="PXD69_002056"
     CDS             4135..4815
                     /locus_tag="PXD69_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDL6284215.1"
                     /translation="MSKPLLQIALDSLSLEKAVADAKQAENQVEIIECGTILAFAEGM
                     KAVSTLRVLHPNHIIVCDLKTTDGGAILAKMAFEAGADWLTVSAAAHPATKAACKKVA
                     DEFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVTQAIYHRSRDAELAGKGWTT
                     EDVELMKQLSDLGIELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIR
                     VEIDKYWN"
     gene            complement(4883..6025)
                     /locus_tag="PXD69_002057"
     CDS             complement(4883..6025)
                     /locus_tag="PXD69_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDL6284216.1"
                     /translation="MKIVIAPDSFKESLTALEVAQAIQQGFARVFPEAEYQLVPMADG
                     GEGSVQSLVDATHGSLQKISVIAPLANEVEGFFGLSGDQKTAFIEMAAASGLHLVPME
                     QRNPLVTTSYGTGQLIKAALDLGVEKIILGIGGSATNDGGVGMLQALGAKFLNAEQRE
                     IGFGGEALSQIQQIDLSGLDSRLKQVEFEVACDVDNPLCGERGASAIFGPQKGATPEM
                     VKMLDHALLHFAETVKSQLGIEIAEKAGAGAAGGMGGGLLLLPNVTLRSGVQIILEAT
                     DLAEKLADADLVVTGEGRMDAQSIAGKTPIGVAKVAKQFGKPVIAIVGSLKEDYPVVY
                     QHGIDAVFPIIRQVSNLEAVLKSGKENLISTAENVARLWKISALQE"
     gene            complement(6035..7414)
                     /locus_tag="PXD69_002058"
     CDS             complement(6035..7414)
                     /locus_tag="PXD69_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL6284217.1"
                     /translation="MSGIALILIFLVAIIIMIYMIAKWKVHPFLALMSISIALALVAG
                     LPLAKIPTIVGEGFSNTFKSIGIVIIFGAIIGTILEKTGAALKLADMVVKVVGQKRPE
                     LAMLIMGWVVGIPVFCDSGFVVLNPIREAIRKKILANPVGMAVALSAGLYASHVFIPP
                     TPGPIAAAGAVGLSHNLLLVIGMGFVVSIPVLIASYFFAKYVGKQVSVMEEAQADQVI
                     SQSYEDLIKQYGKLPSGFLSFAPIFMPIILMAIGSIAKIAGVSGDFGVFLQFVGNPII
                     ALAIGVIFAIFLLVSSGKMAEFDSLTNDTLKLVGPILFITAAGGVLGNVITQAGFVDY
                     IKQNAHIISTAGIFFPFLISAILKTAQGSSTVAIITTASIMGMFNAPDSLMNALGLTS
                     EMAAALTVMAIAAGSMCVSHANDSYYWVVTNFTKLTPQQGYRTQTTLTFIMGVVGMLT
                     VYLLSLILL"
     gene            complement(7536..8630)
                     /locus_tag="PXD69_002059"
     CDS             complement(7536..8630)
                     /locus_tag="PXD69_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284218.1"
                     /translation="MKLNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQR
                     HTGAVIALRNDQAVEIDENLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQY
                     AQLVKMAAELIMQQAFELEQERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAK
                     PLSVMVIKIHGSTAEKLQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNEKSLIRNAL
                     NKLNDPDISFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPAL
                     LHSFSHSWEAKTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLR
                     YRLEKIEQITGLSFNNIEQKFVLYLGAVLS"
     gene            complement(8734..9186)
                     /locus_tag="PXD69_002060"
     CDS             complement(8734..9186)
                     /locus_tag="PXD69_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDL6284219.1"
                     /translation="MNLKAVAVSALAMSSVAMADIADVKPVVFESKFDFQTTVTTLTN
                     TLKEKGMTIFAEIDHQAAAKQAGLEMQPATVLVYGTPKAGTPLMVKDPMLALQLPLKV
                     LITEPNKGKVEVMLNRADQVVAHANTDYADVENNLAKAEKLIKATVAK"
     gene            complement(9207..9959)
                     /locus_tag="PXD69_002061"
     CDS             complement(9207..9959)
                     /locus_tag="PXD69_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDL6284220.1"
                     /translation="MHFEKRSHWSGELGREMSFNVYGHAGKPVIVFPSSGGNENEYGN
                     FGMIEACRSFIERGLIKFYTPDSYDAESWLSKHKSGHDMALAHNAYDRYIIHELVPLI
                     RHESHWNGTMIATGCSMGAFHTVNFALRHPDLFDIAIALSGVYDARFFSGEFYGDKAV
                     YFNSPIDYVWGQNDDWFLDRYRQNHYVIAVGQGAWEEQHIEDTRRLQEAFNAKGIDAW
                     FDYWGFDIDHDWPTWRKQMPYFLGKLEEQGII"
     gene            complement(9970..11154)
                     /locus_tag="PXD69_002062"
     CDS             complement(9970..11154)
                     /locus_tag="PXD69_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDL6284221.1"
                     /translation="MSRPLNFVMISPHFPTNFETFAIRLREAGFNTLGIADAPYESLS
                     ENLRHSLTEYYRVDNMEDYEQVYRAVAYFAHKYGRIDRIESHNEYWLELDAKLRTDFN
                     VFGYKSDDMLSIKTKAQMKEVFRKTGLKVAQGRVFKDDEDARKLAKQLKFPVIIKPNS
                     GVGASDTYKIKTAEELEAFFGYKTPTVEYIMEEFIDGDIITFDGLTDKEGNIVFYSSL
                     EYSEAVLDTVSKDGDMFYYVPCEISPKLVEMGKQCVKAFNVKERFFHFEFFRVKGSKK
                     EELLPLEINCRPPGGLTIDMWNYANDFDVFREFANIVKENKFYADIQHPWNVVYISRK
                     ANQNYVNSIEAVCEKFAGNIISVQSVPGVFAKVMGEQGILARTETMEQMREIAQFAQA
                     KQ"
BASE COUNT         3205 a         2579 c         2347 g         3037 t
ORIGIN      
        1 attccgacaa cttctctgga gttttttagt tctattaatc tctcaacaaa gaggccccct
       61 atggactttt taaccgaaat tctccttttc ttaaaggatc aagtgctgaa taaagcaccc
      121 ttcttactag gtatcgtagc ttgcttaggt tacattcttc ttaaaaaaga cacttctacg
      181 attattaaag gcacaattaa aacaattgtc ggttttatga ttgtacaagc cggttcaggt
      241 ttcttagtaa ccaactttaa gccggttatt gatggcttag ccaaatatca ccaacttacc
      301 ggtgcagtaa ttgaccctta caccagtatg caatcgacca ttcaaaccat gggcgagaac
      361 tacgcttggg ttggttatgc cgtaattggg gcgctgttcc tcaatattct attagtggtg
      421 ttccgccgtt taaccggtat ccgtaccatt atgctcaccg gtcacattat gttccaacaa
      481 gcaggcttgg ttgcggtgtt ctatatgatc atcggagcgt caatgtggga gaccattatc
      541 tacacctcag tgttgatggc tctttattgg ggtatttcgt ctaatattat gtataaacca
      601 acccaagcgg taacaggcgg tgcaggcttc tcaattggtc accaacaaca aattgcttct
      661 tggattgcag tcaaactcgc accaaaactt ggcgataaag acgatactgt agataaaatg
      721 aaattgccta actggctcaa tattttccac gacagtattt ctgcaaccgc attagtaatg
      781 accatcttct ttggaatcat cttactttca ttcggtttag ataacctcaa agaacttgct
      841 ggcaaaacca accagtttat gtacattctt gaaatgggct tgaaatttgc ggtggcaatt
      901 caaatcattg taaccggcgt acgtatgttt gtagctgagc tttcagaagc cttcaaaggt
      961 attgctgaac gcttaattcc aaactcagta ttagcgattg actgtgccgc tatctacgct
     1021 ttctcgccaa atgcgatggt attcggcttt atgtgggggg ctatcggtca atttgtggca
     1081 gtaggcggct tgcttgcagt aggctcaccg gtgcttatta ttccgggctt tatcccgatg
     1141 ttcttctcta acgcaaccat tggtgtgttt gcaaaccaat ttggtggttg gaaagcagta
     1201 atgaaaatct gttttgtgat gggtattatt gaagtgcttg gctcagcttg ggttattcaa
     1261 atgcttgctt cacaaggcac aacctttaac ggttggatgg gtatggctga ctgggcattg
     1321 ttcttcccac caatcctaca aggtattatc agcattccgg gcttcttctt tgtaattgtg
     1381 gcagcagcaa tggtttatat gttcttcgca tctaaacaac ttcgtgccga agaagcagaa
     1441 gcggcagctc gtggcattac acttgaacaa ttagacggct acggcttaga tgaagtaaaa
     1501 gcagaaccaa aagcggaggc agtagtacaa caagcggtcg aaaatgccga aaattctgca
     1561 aacccaatcc gcattctagc ggtgtgtggc tctggtcaag gctcatcaat gatgatgaaa
     1621 atgaagatca aaggctatct cgacaaacgt ggtattccga atattatgga ttcctgtgcg
     1681 gtaactgatt acaaaggcaa attaagcgag gttgatatta ttgtctccag caaacattta
     1741 gccaacgaaa tcgaagtacc ggaaggcaaa gcggtattag gtgtacaaaa tatgctaaat
     1801 ccaaactcat ttggtgatga attagttgag ctaatcaatc agcataatgc aaaataagta
     1861 agtttagggg tgaataatca cccctatcta tgctaaagat tgtaaaaact cacttcatca
     1921 aacgaggaat tatccaatga aaaaaatctt atccaccctg tttatgctct ccgcggttag
     1981 cgttgccgtt gccaaagagg taaacattaa actacttggt acctcagacg ttcacggacg
     2041 tgttgtgccg tggagctacg gggcagacgt ggaagacaaa tccggctcat tcgcccaaat
     2101 tgcaacctat gtcaaagagg tgcgtgccaa ccacaaaaat gtgttgctgt ttgatattgg
     2161 cgatgcgatt caagacaacc aagtcgaaga gttcgctaaa accttagaca aagcgaaaaa
     2221 caatcccgtg ccgaaagtgc tgaatgcaat gaattacgac atcttcattc tcggcaacca
     2281 cgaatttaac ttcggaatgc cgaatttaga tgcgatttta aaagacatca acgccaaaat
     2341 tctcactgcc aacttctatc acaaagacgg caaacgctac gttgagccaa ctaccatcat
     2401 tgaacgtgat ggcgtaaaac ttgggattat cggcttaacc accccaatgt cggctatttt
     2461 tgaaaaagac accggtcatt tagacgcaat gaagttcact tcgccgattg aagaggcgaa
     2521 agcccaaatt gccgatctca aagccaaagg cgtggacgcc attattgtgc tggcacatat
     2581 ggggattgag aacgaaaaca acattcccga caccggcgtg gcggatttag tgaatgcagt
     2641 ggacggtatt gatgtaatta tcgccggcca tatgcataaa gatgtgccga gtgaaactat
     2701 caaaaatacc ctgattaccg aaccgcaccg ctacggcaca gtggtttccg aagttgatct
     2761 tgcctttgat gtgaatgaca aaggcgaagt gaaactactt tctaaaaccg ccaaaaccgt
     2821 accggtgaag aaactcgcaa gcgatccgga aatcgaaaaa atttaccaac cgtatcacaa
     2881 tgaactgcgt gccttaaaca acgtcaaaat cggtgaaact gcacaagatt taatcccaca
     2941 aggcaaaatc acggtgtatc gattgctttc tcgcaagaca ccggaatgtc ctcattgatc
     3001 cacgatgtgc aacaacatta cagcggtgca gacgtagtga gttttgcatt tgactacgaa
     3061 accgtgcgtt tagacaaagg cgacatcaag aaaaaagaca tcatctacaa ctaccgctat
     3121 gccggtggcg atgtgagcat gtatgagcta accggcaaac agcttaaaca gtatatggaa
     3181 tggtcagcgg attacttcga caccattcaa gccggtgaca aagactaccg ctacaacgct
     3241 gtgcggggta aatctaaata cgttaccttc gacctattcg gcggcgtaag ctacaacatc
     3301 gacctacgca atccaagcgg tagcaaaatt gtcgatctaa aactggcaaa cggcagtcta
     3361 atcaccgatg acggcaaata caaagtggga atgaactcct accgctttgg tcagctcacc
     3421 aaaaaaggcg gcatctggga aggacagtaa atccccgtga tttgggaatc caaagtcgcc
     3481 atgggggctg aaaaaggcac aatccaaaat atgctgattg attacatcac caacgtcaaa
     3541 ggcggaaaaa tcgaaggcaa atcgcataac cgctgggcga ttatcggctt aaattaacga
     3601 aagggaaaca ctatgaactt aaaacaatct cttattgaaa ataactctat tttgctcaat
     3661 caatcagcgg cgaattggga agacgcaatc aaaatcggca ctgatttatt agtcaaagcc
     3721 ggtacgattg aaccacgcta ttacgataat attgtaagca aaatcaaaga gatggggcct
     3781 tatattattc ttgcaccggg cttggcaatg cctcacgccc gtccggaaga aggtgtgatt
     3841 aaaacctctt tcgctttagt gacttttgac accccgattt attttgaggg cgaagatgag
     3901 ccggttcacg ttatgctaac ccttgcaggg agtgactctg atcagcatat gcaaggcttg
     3961 gtagaaatca cccaagtgct agatgaccca gagagcgaca caggtgttga tttagataaa
     4021 atccgccgct gtaaaacggc tgaagaagtg tatgcagtaa tcgatcaggc attagcctaa
     4081 tattctacaa gcggttcaaa aacatcaata ttttgcaaat agaggaatac aattatgtcc
     4141 aaaccattat tacaaattgc ccttgattct ctttcactgg aaaaagcggt ggcggatgca
     4201 aaacaagcag aaaaccaagt cgaaattatt gaatgcggta ctattcttgc ttttgctgag
     4261 ggtatgaaag ccgtttccac cttgcgtgta ttgcacccaa atcacattat tgtgtgcgac
     4321 ttaaaaacca ccgatggcgg tgcaatttta gctaaaatgg catttgaagc cggtgccgac
     4381 tggctcacgg tttcggctgc ggctcaccct gcaaccaaag cggcttgcaa aaaagtggcg
     4441 gacgaattta acgctgctca cccggagcta aaagtgaaaa aagagattca aattgaaatc
     4501 tacggcaact ggacggtgga aaaagatgcc aaagagtggg tagaattagg ggtaacccaa
     4561 gcgatttacc accgctcccg tgatgcggaa ctagcaggta aaggttggac aacggaagat
     4621 gttgagttaa tgaaacagct ttctgactta ggcattgaat tatctatcac cggcggtatc
     4681 gtaccggaag atattcacct gttcaaagag atcaaaaacg ccaaagcctt tattgcaggc
     4741 cgtgctttag tcggtgaaaa aggcaaacaa actgccgaag ccattcgtgt ggagattgat
     4801 aaatactgga actaatccgg cattgaaacc caataaaaat ggcgttctct caaccggaac
     4861 gccatttttt atctcatttt ttctattctt gcaaggccga tattttccac aatctcgcta
     4921 cattttcggc agttgaaatc aggttctctt tgcctgattt taacaccgct tctaaattgc
     4981 tgacctgtcg aataatcgga aataccgcat caatgccgtg ttggtacacc acagggtaat
     5041 cttctttcaa tgagccaact atcgcaatca ccggcttgcc aaactgctta gcgactttcg
     5101 ccaccccaat cggggtttta ccggcgatag attgagcgtc cattcgccct tcccctgtca
     5161 ccaccaaatc cgcatcggca agtttctcag caagatcggt tgcctcaaga ataatttgca
     5221 cgccggaacg taatgttacg ttaggcagta gcagtaaacc accgcccatt ccaccggctg
     5281 caccggcacc ggctttctcg gcaatctcaa tgcctaattg ggattttacg gtttcggcaa
     5341 aatgcaacag ggcgtggtcg agcattttaa ccatttccgg tgtagctcct ttctgtggcc
     5401 caaaaattgc cgaagcccct cgctcgccac acagcggatt atcgacatcg caagcaacct
     5461 caaattccac ttgctttaag cgtgaatcca aaccgcttaa atcaatctgc tgaatttggc
     5521 ttaatgcctc gccaccaaag ccgatttccc gctgttcggc atttagaaat ttcgctccta
     5581 aggcttgtag cattccgaca ccgccatcgt tagtcgcact gccgccaatg ccgagaatga
     5641 ttttttccac ccctaaatct aaggcggctt taattaactg ccccgtgccg tagctggtgg
     5701 taaccagcgg atttcgttgc tccattggca ctaaatgcaa gccacttgcc gccgccattt
     5761 caataaaggc ggttttttga tcccccgaca agccaaaaaa gccctccacc tcatttgcaa
     5821 gcggtgcaat tacgctgatt ttttgcaaac tgccgtgagt ggcatcaacc agcgactgta
     5881 ccgagccttc gccaccgtct gccatcggta cgagctgata ctccgcctca gggaaaacac
     5941 gggcaaaacc ctgttgaatt gcttgagcca cttctaatgc ggtcaaactc tctttaaatg
     6001 aatccggtgc aatcacaatt ttcatcgtca atccttagag taaaatcaat gaaagcagat
     6061 aaaccgtgag catacccacc acacccataa tgaaagttag ggtagtttgc gtacgatagc
     6121 cttgttgcgg agtcagttta gtaaagtttg ttaccaccca gtagtagctg tcattggcgt
     6181 gggaaacgca cattgagcca gccgcaatcg ccattacggt taaggctgcc gccatttcac
     6241 tggttagccc taaggcgttc attaatgagt ccggtgcgtt gaacattccc ataatggagg
     6301 cggtggtgat aattgccacc gttgagctgc cttgtgcggt ttttaaaatt gccgaaatca
     6361 ggaacgggaa gaaaatccct gctgtactga taatatgagc gttttgcttg atgtaatcca
     6421 caaagccggc ttgagtaatc acgttaccta gcacaccacc ggcggcggta ataaagagaa
     6481 ttgggccgac taatttcagg gtatcattgg ttaagctgtc aaattccgcc attttaccgc
     6541 ttgaaaccag taggaaaata gcgaagatca ccccaattgc taacgcaata atcgggttgc
     6601 cgacaaattg taggaatacg ccgaaatcgc cacttacacc ggcaattttg gcaatcgagc
     6661 cgatagccat taagataatc ggcataaaaa tcggggcaaa gcttaaaaac ccacttggta
     6721 atttgccgta ttgtttgatc agatcttcat agctttggct gattacttga tccgcttgag
     6781 cttcttccat cacgctgact tgtttgccaa catatttggc aaagaagtaa ctggcaatca
     6841 acacaggaat cgaaaccaca aagcccattc cgatcacaag caggagatta tggcttaaac
     6901 caacagcacc ggctgctgca atcgggcccg gtgtcggagg aataaagacg tgggaggcat
     6961 ataaaccggc acttaacgcc accgccattc ccaccggatt ggcaagaatt tttttgcgaa
     7021 tagcttcacg aatcgggttt aacaccacaa agccgctatc acagaacact gggataccaa
     7081 ccacccagcc cataatcaac attgccagtt cagggcgttt ttgccccacc acttttacca
     7141 ccatatcggc taatttgagg gctgcaccgg ttttttctaa aatcgtgccg ataatcgccc
     7201 caaaaataat cacgataccg atacttttga aggtattact aaaaccttcg cccacaatag
     7261 ttggaatttt ggcaagcggt aaacctgcca ctaatgcaag ggctatcgaa atcgacatta
     7321 aggctaagaa cgggtgaact ttccacttcg caatcatata aatcattatg atgatagcga
     7381 ccagaaagat cagaataagt gcaatacctg acataataag tctcctcatt gtagaaaaat
     7441 gaacttatta ttcggtattt attgctaaaa agatttagat aaatttgcaa aaaatttgtt
     7501 aaaaacgacc gcttgtttgt atatttttac aatttttacg acagaaccgc tccaagatac
     7561 agcacaaatt tttgctctat gttattgaaa gataaaccag ttatctgctc aatcttctct
     7621 aaacggtaac gtagcgtatt tgggtgaata aacaattttt tggcagcgtg atccagatca
     7681 caatttgcga aaaaatagta acgcagactt ttcagtaaca cctgtttttt atcggaaacc
     7741 agtaaagctt ggaacggcga gagcaaggtt ttcgcttccc aagagtggct gaaactgtgc
     7801 aagagggccg gcagtttaaa atcttcaaaa tgaataatct gcttacggct ttggatctgc
     7861 tcggcataat tgagggtatg gcaggcggtt tggtaggaaa tatgggtttg cgataaattt
     7921 tcgaccgcca gcccaaccac cgttttgaag gaaatatccg gatcgttaag tttgtttagt
     7981 gcattgcgga ttaacgattt ttcgttggat aaatgattca gcaaggcaat tttatctaac
     8041 ccaatcacgg cggtgagtag gctcgggaaa taatgttcga aaaaatcaat caggcgttgg
     8101 agtttttccg cagtagagcc gtgaatttta atcaccatca ccgacagcgg ttttgcaaaa
     8161 tcttgcccga aaaagaccgc ttgttgctgg atttctgctg tgcttaggct acctttgagc
     8221 aaggcccgca caaactcttc ccgatagcgg cgttgccaac gttcctgttc caactcaaac
     8281 gcttgctgca taatcagctc cgccgccatt ttcaccaatt gagcatattg ccgaacttgt
     8341 tgtggctgcc ctgaaatccc cactacacca atggttgagc ctaaatagtg aagcggtaag
     8401 ttaatgcccg ctttcacttc atcgcaccac tgttttgcaa gattttcatc aatttcgacc
     8461 gcttgatcgt tgcgtaacgc aatcaccgct cctgtgtgtc gttgcccgat acgaccgaca
     8521 tcgccggaag caataatcac cccttcacta tccatcacat tgacggagtt gggaataatc
     8581 tgcatcgtgc gcttgacgat gcggtcggca atcgcttggt tgagtttcat tatatgattc
     8641 ctactcattc ccaatactat gaaaaatccc tctttcgagg gatttgcaaa ttatctacgc
     8701 ttccacttcc tgagaataga tcatagcgtg aagttatttt gccacagtcg ctttaattaa
     8761 tttttccgct ttggcaaggt tgttttctac atcagcataa tcggtattag cgtgagccac
     8821 cacttgatcg gcacgattta acattacttc gaccttgccc ttgttcggtt cggtaattaa
     8881 cacttttaac ggtaattgca acgctaacat cggatctttc accattaatg gcgtaccggc
     8941 tttcggtgtg ccgtaaacca atacggttgc cggttgcatt tctaagccgg cttgttttgc
     9001 cgccgcttgg tgatcgattt cggcaaaaat cgtcattcct ttttctttta aggtgttggt
     9061 taaagttgtg actgtagttt ggaaatcaaa tttactttca aataccaccg gtttgacatc
     9121 ggcaatatct gccattgcca cgctgctcat tgctaatgca gaaactgcga ctgcttttaa
     9181 gttcatttct tttctcctca aatagattaa ataatccctt gttcttccaa cttgcctaag
     9241 aaataaggca tctgtttacg ccaagtcggc cagtcatggt caatatcaaa gccccagtag
     9301 tcaaaccaag catcgatccc ttttgcgtta aaagcctctt gtaatcggcg ggtgtcttca
     9361 atatgctgtt cttcccacgc accttgtccg actgcaatca catagtgatt ttggcggtag
     9421 cggtctaaga accaatcgtc attttgaccc catacataat caatcggcga gttaaaataa
     9481 accgctttat cgccataaaa ctcaccactg aaaaagcgag cgtcataaac accgcttaag
     9541 gcgatggcaa tatcaaacag atccggatga cgtaaggcaa agtttaccgt atggaaagcc
     9601 cccatactac aaccggtggc aatcatcgtg ccgttccagt gcgattcatg gcggattaac
     9661 ggcactagct cgtgaataat ataacggtcg taagcattat gagctaatgc catatcgtgt
     9721 ccggatttat gtttagataa ccaagattcc gcatcgtaag aatcaggcgt gtaaaatttg
     9781 attaagccac gttcaataaa ggaacggcaa gcctcaatca ttccaaaatt accatactcg
     9841 ttttcattgc cgccggagga agggaaaaca ataaccggtt tacctgcgtg tccgtaaacg
     9901 ttgaacgaca tttcacgacc taattctcca ctccagtggc ttcttttttc aaaatgcata
     9961 cttcacctct tactgtttag cttgtgcaaa ttgtgcaatt tcacgcattt gctccattgt
    10021 ttcggtacgg gctaaaatgc cttgttcgcc catcactttg gcaaatacgc ccggtacgct
    10081 ttgcacgctg ataatattgc cggcaaattt ctcacaaaca gcttcaatcg aattcacata
    10141 attttggttt gccttgcggg aaatataaac cacgttccaa gggtgctgaa tatcggcata
    10201 gaatttgttt tctttcacaa tattggcaaa ttcacggaac acatcgaaat cgttggcgta
    10261 gttccacata tcaatagtta agccacccgg cggacggcag ttgatttcga gtggtaacaa
    10321 ctcttctttt ttgctccctt taacacggaa gaactcaaaa tggaaaaaac gctcttttac
    10381 gttaaaggct ttcacacatt gtttgcccat ttccactaat tttggcgaaa tttcacatgg
    10441 gacatagtag aacatatcgc catcttttga aacggtatct aataccgctt ctgaatattc
    10501 aaggctggag tagaaaacga tattgccctc tttatcggtt aaaccgtcaa aggtaataat
    10561 atcgccgtca ataaactctt ccataatata ttcaaccgtt ggcgttttat aaccgaagaa
    10621 agcttctaac tcttccgcag ttttgatttt gtaagtatcg cttgccccaa cccctgaatt
    10681 tggcttgata atcaccggga atttaagctg ttttgctaat ttgcgggcat cttcatcatc
    10741 tttaaatact cgcccttgtg ccactttcaa gccggttttg cggaatacct ctttcatttg
    10801 ggctttggtt ttaattgaga gcatatcatc gctcttataa ccaaacacat tgaaatcggt
    10861 acgcaatttc gcatctaact ccagccaata ttcattgtgc gattcaatgc ggtcaattcg
    10921 cccgtattta tgggcaaagt acgcgaccgc acgataaact tgttcgtaat cttccatatt
    10981 atctacacga taatattcag tcagggaatg acgcagattt tcgctcaatg attcataagg
    11041 ggcatctgca attcccaatg tattaaaacc ggcttcacgc aaacgaatgg caaaggtttc
    11101 aaagttcgtt gggaagtgcg gggaaatcat cacaaaatta agtggtctag acatagttct
    11161 tcctttat
//
LOCUS       DANLXO010000091        11094 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.091, whole genome shotgun sequence.
ACCESSION   DANLXO010000091 DANLXO010000000
VERSION     DANLXO010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11094
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.091"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            230..478
                     /gene="rpsP"
                     /locus_tag="PXD69_002063"
     CDS             230..478
                     /gene="rpsP"
                     /locus_tag="PXD69_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDL6284222.1"
                     /translation="MVTIRLTRGGAKKRPFYQIVVVDSRSPRDGRFIERIGFFNPLAA
                     GQAERLRLDVAKVDAWVAKGADLSDRVASLVKEARKAA"
     gene            511..1038
                     /gene="rimM"
                     /locus_tag="PXD69_002064"
     CDS             511..1038
                     /gene="rimM"
                     /locus_tag="PXD69_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005626427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDL6284223.1"
                     /translation="MSEQKIEVVGKLGSTYGIRGWLRLYSSTEQTESIFDYQPWFLKI
                     KGQWQQVELESWRYHSNDLIVKLKGTEDREAAQLLTNAEIGVDLSVFPELEEGDYYWH
                     DLIGCSVVNLEGYTMGTVAEMMETGSNDVLVVRNNGKDAFGKQERLIPFLYEQVVKRV
                     DLATKTITVEWDAGF"
     gene            1083..1838
                     /gene="trmD"
                     /locus_tag="PXD69_002065"
     CDS             1083..1838
                     /gene="trmD"
                     /locus_tag="PXD69_002065"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDL6284224.1"
                     /translation="MWIGIISLFPEMFKAITDFGVTGRAVKQNLLQVECWNPRDFTFD
                     KHKTVDDRPYGGGPGMLMMVQPLRDAIHAAKKAALAVEGGEAKVIYLSPQGRKLDQNG
                     VQTLASNQKLILICGRYEGVDERLIQTEVDEEWSIGDYVLTGGELPAMTLIDAVARFV
                     PGVLGKQASALEDSFAEGLLDCPHYTRPEVLDGMPVPEVLMSGHHEQIRKWRLEQSLE
                     RTWLRRPELLDSLALTDEQRVLLAKIKKQHKIS"
     gene            1865..2215
                     /gene="rplS"
                     /locus_tag="PXD69_002066"
     CDS             1865..2215
                     /gene="rplS"
                     /locus_tag="PXD69_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDL6284225.1"
                     /translation="MSNIIKQLEQEQLKQDLPSFRPGDTLEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTLRKVSNGVGVERVFQTHSPVIDSISVKRKGAVRKAKLYYLRE
                     RSGKSARIKERLGD"
     gene            2371..2727
                     /locus_tag="PXD69_002067"
     CDS             2371..2727
                     /locus_tag="PXD69_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284226.1"
                     /translation="MKQLSIRLPDDEFTFIKTFASAHKLTLQNFVMSAIQAKVAEMSA
                     KNKISEESNIHQPLSKDEKIMLNEAKVFYSARSHLKAENVILPSDFMEQIKSGCGAEK
                     MAEMMGYTKEDWESMK"
     gene            2729..3052
                     /locus_tag="PXD69_002068"
     CDS             2729..3052
                     /locus_tag="PXD69_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284227.1"
                     /translation="MGQITFSNIFTKVIFENVLSASTKEKIKQMLFQSVVALPPLHSE
                     RKMILQLKKQKITIFYQVIEEQSVQILAYQFGGTDKLTGVSKAHFKTLDAIFQMTDEE
                     KEGKF"
     gene            complement(3062..3394)
                     /locus_tag="PXD69_002069"
     CDS             complement(3062..3394)
                     /locus_tag="PXD69_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL6284228.1"
                     /translation="MQIEQYQQWVRQFYQQQGWYERSPFMRVTYLAEEIGEVACAVRA
                     IEIGRERPDETEASQQQKRDNLIEELGDVMDNLFVLADKYGISMTEVLERHQAKFEKR
                     YLQKNMEK"
     gene            complement(3487..4683)
                     /locus_tag="PXD69_002070"
     CDS             complement(3487..4683)
                     /locus_tag="PXD69_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDL6284229.1"
                     /translation="MNIPFCLPENISPETFLREYWQKRPLLIRNGLPQIVGLFEPEDI
                     LELALEEEVTARLIQCENEKWSVKSSPLVEEDLEELPVQWSVMVQNLEQWSPELGELW
                     QAFGFIPQWQRDDIMVSCSPLNGTVGKHYDEYDVFLVQGYGQRRWQLGKWCDPSTEFK
                     PNQPIRIFDDMGELVMDEVMNPGDVLYVPSRMAHYGVSESEQGLTFSFGLRYPNATDL
                     LENLCKTIEQQADNINSSEFHLPFRLTPNEQPNALLDPKMVKMFKHQLIDLLQNSEQF
                     DELLTHSVATAASSRRYELLQTDNEYYPDEVQEILEAGGWLQQDANVKILYTENPQRV
                     YVNGEWIDELNEAEMALLIRIANGDSISWNKLASKVQDQAELELMLDTICDWLDSGWI
                     ILSEAE"
     gene            complement(4832..6175)
                     /gene="accC"
                     /locus_tag="PXD69_002071"
     CDS             complement(4832..6175)
                     /gene="accC"
                     /locus_tag="PXD69_002071"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDL6284230.1"
                     /translation="MLEKVVIANRGEIALRILRACKELGIKTVAVHSTADRELKHVKL
                     ADETICIGPAPSVKSYLNIPMIIAAAEVTNADAIHPGYGFLSENANFAEQVEKSGFIF
                     IGPTADVIRLMGDKVSAINAMKKAGVPCVPGSDGPVGNDPKKNKEIAKRIGYPVIIKA
                     SGGGGGRGMRVVHHEKDLEESIAMTKAEAKAAFNNDMVYMEKYLENPRHIEIQVLADT
                     HGNAVYLAERDCSMQRRHQKVVEEAPAQGITPELRQFIGERCANACREIGYRGAGTFE
                     FLYENGEFYFIEMNTRLQVEHPVTEMITGVDLVKEQLRVAAGLPLSITQDDIKVKGHA
                     IECRINAEDPNTFLPSPGKITRLHVPGGLGVRWDSHIYSGYSVPPHYDSMIGKLITFA
                     ENRDIAIRRMENALSETIVEGIKTNIPLHTQILADKEFRKGGTNIHYLEKKLGLK"
     gene            complement(6247..6714)
                     /locus_tag="PXD69_002072"
     CDS             complement(6247..6714)
                     /locus_tag="PXD69_002072"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDL6284231.1"
                     /translation="MDIRKIKKLIELVEESGITELEVSEEEGTVRISRAAPAVAPAAV
                     QYAAAPVVAPAAPQVASTVPVAAPAEAPKAAETSGHAVLSPMVGTFYRSPSPDAKPFV
                     EVGQTVKIGDTLCIVEAMKMMNRIESDKAGVVKEILVNDGEPVEFDQKLFIIE"
     gene            complement(6967..7749)
                     /locus_tag="PXD69_002073"
     CDS             complement(6967..7749)
                     /locus_tag="PXD69_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HDL6284232.1"
                     /translation="MAVKNEQFIVICNGVFRLFGNIVKILSYPFHALFPKKRFTIPEY
                     SPAKIQSSIPSKITKTIWQTNYSNKVTLPMYANYLFNRLMSLSYDYRYVSTEEREAYI
                     KANADERTFNAYSKLTDGAAQADFWRIFTLLREGGIYIDIDGHLVYPLSKIIGENDSE
                     VLIKRRDKYTNFFLASEAGNWILKDTLELIISNIENRRIEGGVFVMTGPDTLNNAIGD
                     KEVNFRRDKVTCAQGTFTNEYFQYIDKPGSKWNYKKNEDLLK"
     gene            complement(7759..8196)
                     /gene="aroQ"
                     /locus_tag="PXD69_002074"
     CDS             complement(7759..8196)
                     /gene="aroQ"
                     /locus_tag="PXD69_002074"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDL6284233.1"
                     /translation="MKKILLLNGPNLNMLGKREPQIYGSQTLADIENHLKKLAAAQDV
                     ELESFQANGEEPIINRIHQAFQHTDFIIINPGAFTHTSVAIRDALLSVSIPFVEVHLS
                     NVHSREPFRHHSYLSDIAKGVICGLGAKGYEYALDFAISHLKA"
     gene            complement(8282..8650)
                     /locus_tag="PXD69_002075"
     CDS             complement(8282..8650)
                     /locus_tag="PXD69_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL6284234.1"
                     /translation="MAFTIRKMVEQDTHQVFPLMQKLAVFEHYIDSFAITPEVVMESG
                     FRKSPPDFYCLVAENASNIIGILVYYFLPYTAQNRPAIYMKELYVDETARNQKVGEAL
                     MQALKNEAKAHHCKTIKSLE"
     gene            complement(8710..9534)
                     /gene="dapD"
                     /locus_tag="PXD69_002076"
     CDS             complement(8710..9534)
                     /gene="dapD"
                     /locus_tag="PXD69_002076"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDL6284235.1"
                     /translation="MSLQAIIEAAFERRAEITPKTVDAETKAAVEEVIAGLDNGSLRV
                     AEKKDGEWVVNQWVKKAVLLSFRIADNEIIDGAETKFYDKVPTKYGNYTEEQFKADGI
                     RAVPGAVVRKGSHIEKNVVLMPSFVNIGAYVGEGTMVDTWVTVGSCAQIGKNVHLSGG
                     VGIGGVLEPLQANPTIIGDNCFIGARSEIVEGVIVEDNCVISMGVFIGQSTKIYDRET
                     GEVHYGRVPAGSVVVSGSLPSKDGSHNLYCAVIVKKVDEKTLSKVGLNDLLRSIDE"
     gene            9682..10344
                     /locus_tag="PXD69_002077"
     CDS             9682..10344
                     /locus_tag="PXD69_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDL6284236.1"
                     /translation="MENFANLLTGKTREHLVPLPNALSDKHYLQPQVVEAFLTLQHAA
                     KQAGFNLQPASTFRDFERQKGIWNAKFRGERKVHDDNGVAIDMAALSDLEKCKAMLRW
                     SAVPGASRHHWGTEIDIFDPDLLPENTPLLLEPWEYLEGGYFADLTKWLHVNAETFGF
                     YFPFDGKHSRVGFEPWHISYRPISNEYEQRFNDEILKAAWQDEEVAGKECLLEHFEEL
                     LK"
     gene            10341..11093
                     /locus_tag="PXD69_002078"
     CDS             10341..11093
                     /locus_tag="PXD69_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6284237.1"
                     /translation="MIQLINETQQHDKFRQICDKWQLVEDKSSPLALVLTEERLELRK
                     LDEPKLGAIAVNFVDGTMAHRRKFGGGRGEAVAKAVGIKGDYLPTVIDATAGLGRDAF
                     VLAAVGCKVLLVERNPIVAALLEDGLNRAYQDVEIGSFMQERMILADVRDISQLDPQS
                     QMAEVVYLDPMYPHKQKSALVKKEMRVFQHLVGADLDSDSFFLPAKGLAKKRVVVKRP
                     DYAPFLAEQKPDFSHTTKNHRFDVYLSHLKND"
BASE COUNT         3182 a         2240 c         2383 g         3289 t
ORIGIN      
        1 ttatgatatt ttaaacattt tctgatggtt agaacaattt ttattagtaa tttgtataaa
       61 aaaacgctaa atgtatcttt ctttaaaaga gtcatatcaa tgaatctccc ttgtctttcc
      121 gcaaaaaatc tgtataattt gaccgcttgt tttctctttt gaaacaagtt cgttaccctc
      181 acctcgaacg agggtttatt ttttactatc aacatttaga ggaaaggtta tggtaaccat
      241 tcgtttaact cgtggcggag ctaaaaaacg cccattttac caaatcgtgg tagtggacag
      301 ccgttcacct cgtgatggtc gctttatcga gcgtatcggt ttcttcaacc cattagcagc
      361 aggtcaagct gagcgtttac gcttagatgt ggctaaagta gatgcttggg ttgctaaagg
      421 tgctgattta tcagaccgtg ttgcttcttt agtaaaagaa gctcgcaaag cagcttaatt
      481 tttaagccaa aattaaataa gtaggtgagt atgagcgaac aaaagatcga agttgtcgga
      541 aaattaggtt caacctatgg tatccgtggt tggttgcgtc tctattcatc gacagaacaa
      601 actgagagca ttttcgacta ccagccgtgg tttttaaaaa ttaaaggtca gtggcagcag
      661 gtcgaattag aaagctggcg ttatcatagc aatgatttga ttgttaaatt gaaaggcact
      721 gaagaccgtg aagccgcaca gttattaacc aacgctgaaa ttggcgtgga tttgtctgtg
      781 tttcctgaat tggaagaggg agattactat tggcacgatt tgatcggctg ttcggtagta
      841 aacttagagg gctacacaat gggaacagtt gccgaaatga tggaaacagg ttcaaatgat
      901 gtgcttgtgg tgcgtaataa cggcaaagat gctttcggta aacaagaacg attaattccg
      961 tttttgtatg aacaagtagt taaaagagta gatctcgcca ccaaaaccat tacggtggag
     1021 tgggacgctg gtttctaacc tcaggtatgc ggtgagcttt ggaaaacatt taaggcgtta
     1081 aaatgtggat tggtattatt tcactgtttc ctgaaatgtt taaagcaatt accgatttcg
     1141 gggtgacagg acgtgcagtt aaacaaaatc tactgcaagt tgaatgttgg aatcctcgtg
     1201 attttacatt cgataaacat aaaactgtag atgatcgccc ttatggcggt ggtccgggaa
     1261 tgttgatgat ggtgcaacct ttgcgtgatg cgattcacgc agcgaaaaag gcggcattag
     1321 cagtagaagg cggtgaagct aaagtgattt atctttcgcc gcaaggacgt aaactcgatc
     1381 aaaacggtgt gcaaacactg gcttcaaatc agaaactgat tttaatttgt ggacgatatg
     1441 aaggcgtgga cgagcgattg attcaaacag aagttgatga agaatggtca atcggtgatt
     1501 acgttctcac agggggggaa ttacctgcaa tgacattaat tgatgcagtt gcaaggtttg
     1561 ttcccggggt attaggcaaa caggcttccg cgttagagga ttctttcgca gagggattat
     1621 tagattgccc acattatacc cgccctgaag tattagacgg tatgcctgtt ccggaagtgc
     1681 tgatgtctgg acaccatgaa caaattcgta aatggcggtt ggaacaatcg ctggaacgaa
     1741 cgtggttaag acgccctgag ctattggata gcctagctct gactgacgaa cagcgtgtgt
     1801 tgttagctaa aattaaaaaa cagcacaaaa tcagttaatt ctaggattat agaaggtttt
     1861 taaaatgagt aacatcatca aacaacttga acaagaacag ttaaaacaag acttacctag
     1921 cttccgtccg ggtgacacat tagaagttaa ggtatgggta gtagaaggta gtaaaaaacg
     1981 tttgcaagcg ttcgaaggcg tggttattgc aattcgtaac cgtggcttgc actctgcatt
     2041 cactctacgt aaagtttcaa atggcgtagg cgttgagcgt gtattccaaa ctcactcacc
     2101 tgtaattgac agcatttctg ttaaacgtaa aggtgcggta cgtaaagcta aactttacta
     2161 cttacgtgag cgttctggta aatctgcacg tatcaaagag cgtcttggcg actaattgct
     2221 acaaaacagt gaaatgcaca aaagccttga ggaaactcaa ggcttttgct ttttgtactt
     2281 acaagcagtt atttttcctc aatgatttac aaatcttgct ttcttttttg ttataatgtt
     2341 aacaagataa cattaatgat aggtgtcgat atgaaacaat taagtattag attgccagac
     2401 gatgaattta cttttattaa aacatttgct tctgctcata aactgacttt acaaaatttt
     2461 gtgatgtccg caatccaagc taaagttgca gaaatgtctg ctaaaaataa aatatctgaa
     2521 gaaagtaaca ttcatcaacc tctttctaaa gatgaaaaaa taatgctaaa tgaggcaaaa
     2581 gtattttatt ctgctcgttc gcatttaaag gcagaaaatg tgattcttcc gagtgatttt
     2641 atggagcaaa ttaaatcagg ctgtggagca gaaaaaatgg cagaaatgat gggatatacc
     2701 aaagaagatt gggagtcaat gaagtaatat ggggcagatt acatttagta atattttcac
     2761 aaaagtgatt tttgagaatg tgctttctgc ttcaactaaa gagaaaataa aacaaatgct
     2821 ttttcagtct gtggttgcat tacctcctct ccattcagaa agaaaaatga ttttacagtt
     2881 gaaaaagcaa aaaattacca ttttttatca agttattgag gaacaatctg tgcaaatcct
     2941 cgcttatcaa tttggtggaa ctgataaatt gacaggtgtg tctaaagctc actttaaaac
     3001 actagatgcc atttttcaaa tgacggatga agagaaagaa ggaaaattct aatgtaagcg
     3061 gttatttttc catatttttt tgcaaataac gtttctcaaa ttttgcttga tggcgttcaa
     3121 gcacttccgt catcgaaatg ccatatttat cggctaatac aaaaagatta tccatcacat
     3181 cgcctaactc ttcgattaag ttatctcgtt tttgctgttg tgaagcttcg gtttcgtccg
     3241 gtcgttcacg cccgatttca atcgctctta ctgcacaagc cacttcgccg atttcttctg
     3301 ctagataagt cacccgcata aaagggcttc gttcatacca accttgttgt tggtaaaact
     3361 ggcgaaccca ttgttgatat tgttcaattt gcattttatt tctgattcaa aaagtaggga
     3421 cgaaaaattt ttcgcccttt tataagaaaa tgtatcaggg caaatgatga tttgccccta
     3481 ggagtgttac tctgcctcag agagaataat ccagccacta tccagccagt cgcaaatggt
     3541 gtctagcatt agctccagct ccgcttggtc ttgcactttg gaggcaagtt tgttccacga
     3601 aatcgaatct ccattggcga tacgaatcag taatgccatt tctgcttcgt ttaactcatc
     3661 aatccactcg ccatttacat aaacccgttg agggttctcg gtgtagagga tttttacatt
     3721 tgcatcttgc tgtaaccagc cgccggcttc gagaatttct tgcacttcgt cagggtaata
     3781 ttcattgtca gtttgcaata attcataacg gcgggagctt gccgcagtgg caacactgtg
     3841 agtgagtaac tcatcgaact gttcggaatt ttggagcaag tcgattaact gatgtttaaa
     3901 cattttcacc attttcggat caagcaacgc attcggctgt tcattcggcg ttaagcggaa
     3961 cggaagatga aattccgatg aattaatgtt gtcggcttgt tgttcgatgg ttttgcagag
     4021 attttccagt aaatcggtcg catttggata acgtaaacca aaagagaaag ttaaaccttg
     4081 ctcgctttcg gaaacaccat agtgagccat tcgagacggc acataaagca catcacccgg
     4141 gttcattacc tcgtccatta ccagttcgcc catatcatca aaaatgcgga tcggttggtt
     4201 tggtttgaat tcggtgcttg gatcgcacca tttgcctaat tgccaacgac gttgcccata
     4261 gccttgcacc aagaacacat cgtactcatc ataatgtttg ccgacagtgc cgttgagcgg
     4321 tgagcaagaa accataatgt catcacgttg ccattgcggg ataaaaccaa aagcctgcca
     4381 aagctcgcct agctcaggag accattgctc gaggttttgc accattacag accattgtac
     4441 aggtaactct tccaaatctt cctcaacaag cgggctggat ttaacagacc atttctcgtt
     4501 ttcgcattga atcaggcgtg cagtgacttc ttcctctaat gccagttcta aaatatcttc
     4561 cggctcaaac aatccgacaa tttggggtaa gccgttacga attaatagcg gtcgtttttg
     4621 ccaatattct cgcaaaaagg tttcagggct gatattttca ggtaagcaga atggaatgtt
     4681 cataatggct ccttgctacg tgcttctttg agattactga tattctaccc gagaaatcag
     4741 gaaaaacggg aaatttttta tgatttagcg acatcattca cattttgaag aggaaataat
     4801 gaaaaaggcg aacattgttc gcctttgaaa tttattttaa accgagtttt ttctcgagat
     4861 agtggatatt ggtgccacct ttgcggaatt ctttatccgc aagaatttga gtatgtaaag
     4921 gaatattggt tttaatgcct tccacaatgg tttcggaaag ggcattttcc atccggcgaa
     4981 tcgcaatatc acgattttca gcaaaggtaa tcaatttacc aatcattgaa tcgtaatgtg
     5041 gcggcacgct atagcctgag taaatatgtg aatcccaacg cacacctaaa ccacccggaa
     5101 cgtgtaaacg ggtaatttta cccggcgatg gcaagaaggt gtttggatct tctgcgttga
     5161 tacggcactc aatggcgtga cctttcactt taatatcatc ttgtgtgatc gaaagtggta
     5221 agccggctgc cacacgcagt tgctctttta ccaagtccac accggtaatc atttcggtta
     5281 cagggtgttc tacctgtaag cgggtgttca tttcaatgaa gtaaaactcg ccgttttcat
     5341 ataagaactc aaaagtacct gcaccacggt agccaatttc acggcaggca ttggcacaac
     5401 gctccccaat aaattgacgc aattcaggtg taataccctg agcaggtgct tcttccacca
     5461 ctttttggtg gcgacgttgc attgaacagt cacgctctgc taaataaacc gcattaccgt
     5521 gagtatcggc aagtacttgg atttcaatat ggcgtggatt ttctaaatat ttctccatat
     5581 acaccatatc gttattaaat gccgctttcg cttcggcttt cgtcattgcg atagattctt
     5641 ccaaatcttt ctcgtgatga accacacgca taccacgacc gccaccacca cctgatgctt
     5701 tgatgatcac cgggtagccg atacgtttag cgatttcttt atttttcttc ggatcgttac
     5761 caaccggacc gtcagaaccc ggtacgcaag gcacgccggc ttttttcatt gcattgatag
     5821 cagagacttt atcgcccatt aagcgaatca catcagccgt tggaccaata aagataaagc
     5881 ctgatttctc aacttgttcg gcaaagtttg cgttttcaga taagaaaccg tagcccggat
     5941 gaatagcatc ggcattcgtt acttcggcag cggcaataat catcgggata tttaaatagc
     6001 tttttaccga tggagcagga ccgatacaaa tggtttcatc ggctaattta acgtgtttta
     6061 attcacggtc ggcagttgaa tgcactgcaa ccgttttaat gcccaattct ttacaagcac
     6121 gcaaaatacg cagggcaatt tcaccacggt ttgcgataac aactttttct aacataggga
     6181 aattccttgt gttctagaaa atgtagggcg tgttgcacac gcccgttgga taatttaagg
     6241 aagagcttat tcaatgatga ataatttttg gtcgaattct accggttcgc catcattaac
     6301 taagatttct tttaccacac cggctttgtc tgactcgata cggttcatca ttttcattgc
     6361 ttctacaata cataacgtat caccgatttt cacggtttga cccacttcaa cgaacggttt
     6421 tgcatctggg cttgggctac ggtagaaagt ccccaccatt ggtgaaagca ctgcgtggcc
     6481 actcgtttct gcggcttttg gtgcttcagc cggagctgca acaggtactg tcgaagctac
     6541 ttgaggtgcc gctggtgcaa caacaggagc tgctgcatat tgaactgcag ctggtgcaac
     6601 agctggagca gcacggctaa tacgcaccgt accttcttct tcagacactt ctaactcggt
     6661 aatgccagat tcttcaacta attcaataag ttttttgatt ttgcgaatat ccataataag
     6721 attccgtatg tgattaaata aaataaaaaa gagaactcca catttggggt ataaattcaa
     6781 atgtagagtt aaaaaatgct gggcgtagaa tacctgaatt tcgctaattt tgcgaataaa
     6841 atctgataat tttggcgaaa atggacgatt ttagcattca tcgtaccagt taggattttt
     6901 ggaaaatggt gactcacaag cgattgaaaa ttgccaattt tttgtaaaaa acaaccgctt
     6961 gtcagattat ttcaataaat cttcattttt cttgtaattc cacttgctac cgggcttgtc
     7021 gatatactga aaatattcgt tggtaaaagt accttgagca caagttactt tgtctcggcg
     7081 gaaatttact tctttatcac caatggcatt atttagggtg tcaggaccgg tcataacaaa
     7141 cacgccacct tcaatccgac gattctcaat attgctgata atcagctcaa gggtgtcttt
     7201 tagaatccaa tttccagctt ccgaagccaa gaaaaagttg gtgtatttat cacggcgttt
     7261 aattaacact tcgctatcat tttcgccaat aattttagag agtgggtaaa ccaaatgccc
     7321 gtcaatatca atataaatgc caccttctcg gagcaaagta aaaattcgcc aaaaatcagc
     7381 ttgtgccgca ccatcggtta atttgctata ggcgttaaag gtgcgttcat cggcgttggc
     7441 cttgatgtat gcctctcgtt cttctgtgct aacgtagcga taatcgtagc tcaatgacat
     7501 taggcggtta aacagataat tcgcatacat tggcaaggtg actttgttag aataattcgt
     7561 ttgccaaatg gttttggtaa ttttgctcgg aatgcttgat tggatttttg ccgggctata
     7621 ttccggaatg gtgaaacgtt ttttcggaaa aagtgcatgg aacggataac tcaatatttt
     7681 gacgatatta ccgaataaac ggaagactcc gttacagatc acaataaatt gttcattttt
     7741 aacagccatt ttattacctt atgcttttaa gtgtgaaatt gcaaaatcca acgcatattc
     7801 atagcctttt gcccctaaac cgcaaataac gccttttgca atatcactta gataggagtg
     7861 atggcgaaaa ggttcacggc tatgaacgtt agacaaatgc acctcaacaa acggaatcga
     7921 cacactcaat aacgcatcac gaattgccac gctggtgtga gtaaatgccc cggggttaat
     7981 aataataaaa tcggtatgct gaaaggcttg gtgaatacgg ttgataatcg gctcttcacc
     8041 gttggcttga aagctctcca gctcaacatc ttgggccgca gccaattttt ttaagtggtt
     8101 ttcaatatcc gccaaagttt gcgaaccgta aatttgtggc tcacgtttgc ccaacatatt
     8161 taaattcggg ccgttaagga gaaggatttt tttcatattt acttattcaa cttgtaattc
     8221 ataattaagc cattcacggt tttctttcgc ccccaagcgt tgataaaaac gaataccacc
     8281 gtcattccaa ggattttatt gtcttacaat gatgtgcctt cgcctcattt ttcaaggctt
     8341 gcattaacgc ctctcccact ttctgattcc gagcagtttc atcaacataa agctctttca
     8401 tataaatagc ggggcggttt tgggcagtgt aaggaagaaa ataataaacc aatatgccga
     8461 taatgttaga cgcattttca gccactaaac agtaaaaatc gggtgggctt ttgcgaaagc
     8521 cggattccat tacaacttca ggagtaatcg caaaagaatc gatatagtgc tcaaacacag
     8581 ccagtttttg catcagaggg aacacttggt gggtatcttg ttcgaccatt ttgcggattg
     8641 taaatgccat aaaattcctt acaagcggta aaaaaatccc tcacttttgc aaagcgaggg
     8701 aggttttaat tattcgtcaa tagaacgtaa taagtcgttt aagcccactt tgcttaaggt
     8761 tttctcatcc acttttttca caatcaccgc acagtagagg ttgtgtgaac catcttttga
     8821 tggaagcgag cctgaaacca caacagagcc tgccggcaca cggccgtaat gtacttcgcc
     8881 ggtttcacgg tcgtaaattt tggtagattg accgataaac acgcccattg agatcacgca
     8941 gttatcttcg acaatcacgc cttctacgat ttcagaacgt gcaccgataa agcagttgtc
     9001 gccgatgatg gttgggttcg cttgtaatgg ctctaacaca ccaccgatgc ccacgccacc
     9061 agaaaggtga acatttttac cgatttgcgc acaagaaccc actgttaccc aagtgtccac
     9121 cattgtgcct tcgccaacgt atgcaccgat gttcacgaaa gatggcatta acaccacgtt
     9181 tttctcgata tgtgaacctt tacgcaccac cgcacccggc acggcacgaa tgccatctgc
     9241 tttgaattgc tcttcggtgt agttgccgta tttggttggc actttgtcgt agaatttggt
     9301 ttctgcaccg tcgatgattt cattgtcggc aatacggaat gaaagtaata ccgctttttt
     9361 cacccattgg tttactaccc actcgccatc ttttttctcg gcaacacgca gtgaaccgtt
     9421 gtctaatcct gcgatcacct cttctactgc tgctttggtt tcagcatcaa cggttttcgg
     9481 agtaatttcc gcacggcgtt caaatgccgc ttcaataata gcttgtaaag acattgttgt
     9541 gttccttcaa tatataaatt aaaacagaaa attcggctca ctttttaaca tagaaaggcg
     9601 tttatttcca caagaaaaaa catatcgcag aaatttagtt tataattcca agccacttat
     9661 ttgatacaag cggtgatttt tgtggaaaat tttgcaaatc tgcttaccgg taaaacgcgt
     9721 gagcatttag tgccgttgcc gaacgctctt tcggataaac attaccttca gcctcaggtg
     9781 gttgaggctt ttttgacgtt gcagcatgct gcaaaacaag ccggctttaa tttacagcct
     9841 gccagtactt ttcgtgattt tgaacgccaa aaagggattt ggaatgcgaa gtttaggggt
     9901 gagcgtaagg ttcacgatga taacggggtt gcgattgata tggcggcgtt atcggatctt
     9961 gaaaagtgca aagcaatgtt gagatggtct gcggtgccgg gggcaagtcg gcatcattgg
    10021 ggaacggaaa ttgatatttt tgaccctgat ttattgccgg aaaatacgcc tttattgctt
    10081 gagccgtggg aatatttgga aggtggctat tttgccgatt taaccaagtg gttacacgtt
    10141 aatgcggaaa catttggctt ttatttcccg tttgacggta aacattctcg agtgggcttt
    10201 gagccgtggc acattagcta tcgcccgatt tcaaatgaat atgagcaacg ctttaacgat
    10261 gaaatcttaa aagctgcgtg gcaagatgaa gaagtggcgg gtaaggaatg cttacttgaa
    10321 cattttgaag aattactaaa atgatccaat taattaacga aacccaacaa cacgacaaat
    10381 tccgccaaat ttgcgacaaa tggcagctgg ttgaagataa atccagcccg ttagccttag
    10441 tgctaacgga ggaacgattg gaactacgca aattagacga acccaagctc ggggcgattg
    10501 cagtgaattt tgtggacggt acgatggcac atcggcgtaa attcggtggt gggcgaggtg
    10561 aagccgttgc gaaagcggtc ggcattaaag gggattattt gccaactgtg attgatgcga
    10621 cagccggttt agggcgagat gcttttgtat tagcagcggt tggttgtaaa gtgctgttag
    10681 tggaacgcaa tccaattgtc gctgccttgt tggaagatgg tttaaaccga gcttatcaag
    10741 atgtggaaat cggcagtttt atgcaagaaa gaatgatctt agccgatgtt cgagacattt
    10801 ctcagctaga tccacaatcc caaatggctg aggtagtgta tttagatccg atgtatccgc
    10861 acaaacaaaa aagtgcgttg gtgaaaaaag aaatgcgggt gtttcaacat ttagttgggg
    10921 cagatttaga ttcggacagc tttttcttac cggcaaaagg attggcaaaa aaacgtgtgg
    10981 tagtgaagcg tccggactat gccccgtttt tagcggagca aaagcctgat ttttcacaca
    11041 ccaccaaaaa tcaccgtttt gatgtttatc tttctcacct gaaaaatgat taaa
//
LOCUS       DANLXO010000092        10986 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.092, whole genome shotgun sequence.
ACCESSION   DANLXO010000092 DANLXO010000000
VERSION     DANLXO010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10986
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.092"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(7..312)
                     /locus_tag="PXD69_002079"
     CDS             complement(7..312)
                     /locus_tag="PXD69_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284238.1"
                     /translation="MSKLNKLLSRKTSRKIIPEQVNFDINLPIYIPLFLSDKTAKIQA
                     VWELEQENGERDAGAVKRNRIQFRYLPEGVHKLTLIVGTPLLSKGSKVYQCLIKVNK"
     gene            687..1802
                     /gene="asd"
                     /locus_tag="PXD69_002080"
     CDS             687..1802
                     /gene="asd"
                     /locus_tag="PXD69_002080"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDL6284239.1"
                     /translation="MQNVGFIGWRGMVGSVLMDRMVEENNFANINPVFFTTSQAGQKA
                     PVFGGKDAGELKNAFDIEELKKLDIIVTCQGGDYTNEVYPKLKETGWNGYWIDAASAL
                     RMKDDAIIVLDPVNQHVISEGLKNGIKTFVGGNCTVSLMLMAIGGLFEKDLVEWVSVA
                     TYQAASGAGAKNMRELLSQMGELEDSVKAELANPASSILDIERKVTAKMRAEDFPTEN
                     FGAALGGSLIPWIDKLLPETGQTKEEWKGYAETNKILGLSDNPIPVDGLCVRIGALRC
                     HSQAFTIKLKKDIPLAEIEQIIAAHNEWVKVIPNDKETTLRELTPAKVTGTLSVPVGR
                     LRKLAMGGEYLAAFTVGDQLLWGAAEPVRRILVQLTQ"
     gene            1912..2838
                     /locus_tag="PXD69_002081"
     CDS             1912..2838
                     /locus_tag="PXD69_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6284240.1"
                     /translation="MKPIFLEIRHLRTLIALKESGSVSLAAKRVHLTQSALSHQIKLL
                     EEQYDLTLFERKSSPIRFTPAGERLIKLAYDILPKVIEAELDLARVKQGEVGEVRVAV
                     ECHTCFDWLMPAMDTFRQHWPLVELDIVSGFHTDTVGLLLSHRADLAIVAEEEDSAGI
                     IYKPLFSYEMVAICSKDHPLATKDVWEAEDFKDETLITYPVPDDMLDLLRKILGPAGI
                     KVTRRNSELTIAIIQLVASRRGIAALPYWAVKPYLDRGYVVARKITQQGLYSTLYGAI
                     READATLAYLDDFHDTVKSQSFATLPGLMVLE"
     gene            complement(2905..4350)
                     /gene="pntB"
                     /locus_tag="PXD69_002082"
     CDS             complement(2905..4350)
                     /gene="pntB"
                     /locus_tag="PXD69_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HDL6284241.1"
                     /translation="MSFGFVTAAYIIAAILFIMSLAGLSKHETAKAGCWYGIVGMAIA
                     LVATIFGPQSHGTIWILIAMAIGGFIGVKKALKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYGLHTNALMPANLDETAQAAFLAEQATLANIHNVEVFLGIFIGAVTFSGSLVAFG
                     KLSGKLFGRKVSSAALNIPHKHKWNLAAIIVSVFLMIVFLNNPHNIFPVLIMTIIALV
                     FGWHLVSSIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYI
                     MCKAMNRSFISVIAGGFGNEVQSGKGDEEYGEHRETKAEEVAEMLKNASSVIITPGYG
                     MAVAQAQYPVAEITAKLREKGVNVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDE
                     INDDFEETDVVLVIGANDTVNPAALDDPSSPIAGMPVLEVWKAQNVIVFKRSMAVGYA
                     GVQNPLFFKENTQMLFGDAKERVDDILRALN"
     gene            complement(4365..5903)
                     /gene="pntA"
                     /locus_tag="PXD69_002083"
     CDS             complement(4365..5903)
                     /gene="pntA"
                     /locus_tag="PXD69_002083"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HDL6284242.1"
                     /translation="MLIGVPRELLDGETRVAATPKTVEQIKKLGFDVLVEQDAGFKAS
                     FEDNTFLNAGANIGTQQEVWNADIIFKVNAPTEAEIELIKEGVTLVSFIWPAQNPQLM
                     EKLQSKKINVLAMDAVPRISRAQALDALSSMANISGYRAVIEAANAFGSFFTGQITAA
                     GKVPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDSRPEVKEQVKSMGADFLEIDFEE
                     EGGSGDGYAKVMSEEFNRRAMALYAEQAKEVDIIITTAAIPGKPAPRLITKEMVDSMK
                     PGSVIVDLAAATGGNCEYTKAGEIVVTDNQVKVIGYTDFPARLPTQSSQLYGTNLVNL
                     LKLLAPNKDGQIEINFDDVVLRGVTVVRDGELTWPAPPIQVSAQLQKQAAAPQAVKKE
                     EKPADPRVKYGVMAAAGVLFLWLASVAPAAFLSHFTVFVLACVVGYYVVWNVSHALHT
                     PLMAVTNAISGIIIVGAVLQIAQPTGNFFIDILAFIAILVASINIFGGFKVTQRMLAM
                     FRKG"
     gene            6083..6799
                     /gene="trmJ"
                     /locus_tag="PXD69_002084"
     CDS             6083..6799
                     /gene="trmJ"
                     /locus_tag="PXD69_002084"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HDL6284243.1"
                     /translation="MQILNQIQIILVETSLPANIGSAARAMKTMGLTHLRLVAPKQPL
                     DEQAEALAAGAKDVLDNAQCYATFDEAIADCQLVIGTSARLRHLQNTLIEPRDCGELV
                     VNRTNLGKVAIVFGRERVGLTNEELLKCQYHLNFPTNPDYGSLNLAMAVQLASYEIRM
                     AYLQNSGEKQPLAADKDYPTAQALEHFFAHTERLYTELGFIRNDSVMLKLRRLYQRAE
                     LETNELNLLRGMLTAVEKAN"
     gene            complement(6881..9381)
                     /locus_tag="PXD69_002085"
                     /pseudo
     CDS             complement(6881..9381)
                     /locus_tag="PXD69_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651737.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
     gene            complement(9476..10912)
                     /gene="glgA"
                     /locus_tag="PXD69_002086"
     CDS             complement(9476..10912)
                     /gene="glgA"
                     /locus_tag="PXD69_002086"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HDL6284244.1"
                     /translation="MKVLHICSEMYPLIKTGGLADVMGALPFAQQQAGNDVRVLIPYY
                     PKVAQTLGETVEVATIGTFAGTVSVRFAYFNGLGVYVIDAPHLFMRDGNPYHDSNYQD
                     YPDNYKRFALLGYIGAQLAQGLDHWWGTAQVLHAHDWQAGLACAYLKSWGSNVKTLFT
                     IHNIAYIGRFNAFHLAELGLPWEFFHAEGLEFYGEISYLKAGLYFADRITTVSPTYAR
                     EITEEIAGAGLHGLLATRQYQGRLRGILNGVDAEVWNPETDTHIVVNYRANYMHGKAK
                     NKAELQRIFGLPEDKEALLMVMVTRLTEQKGADFLLANIDTLMQHKVQIIVLGSGSPD
                     LENALRYFQHKYPNQIGVKIGYDEALSHQIIAGGDLILVPSRFEPCGLTQLYGLKYGT
                     LPLVRRTGGLADTVVDSHKESIENRSATGFVFDYPDAPAFLEAAMRAISLWQKQKLWS
                     SVRQNALAQDFGWAKVAEQYQNLYHEII"
BASE COUNT         3242 a         2457 c         2134 g         3153 t
ORIGIN      
        1 ttaatattat ttattaactt taattaggca ttgataaacc ttacttcctt ttgataataa
       61 aggcgtacca acaattaatg ttaatttatg taccccttct ggcaagtatc taaactgaat
      121 acgatttcgc tttacagcgc cagcatcacg ctcaccattt tcttgttcta actcccatac
      181 tgcttgaatt ttcgctgtct tatctgataa aaacagcggg atatagatag gcaagttaat
      241 gtcaaaatta acttgctcag gaataatttt acgcgatgtt tttctcgata ataatttgtt
      301 taacttagac atagaatgtt cctttgtaaa atgtaaaata aactcattca ttactgtaaa
      361 gcttaaaata aaagtattag aaataatagt taaaaacctc ccatttaact aacctagatc
      421 aaactttagg taattacatc tacttcctat cgatatatcg gcaaaattta ttgattagac
      481 cacaattgga atgcataaat tgtgagcatt tccctattta taagattcta tttatttcca
      541 aaaatacacc ataatcgatg ttttatttta acaatagcgg ttaaattttg tcaaaacttt
      601 gcaaatcaat aaaaaacatt gatttttgca ctaaaatcct gtatttattc acaatcttta
      661 taacatcatt tttaggagca aacacaatgc aaaatgtagg ttttatcggt tggcgtggta
      721 tggtcggttc ggtcttaatg gatcgtatgg ttgaagaaaa taacttcgcc aatatcaacc
      781 ctgttttttt cactacttca caagcgggtc aaaaagcccc tgtttttggc ggaaaagatg
      841 ccggcgaatt aaaaaacgcc tttgacattg aagaattaaa aaaattagac attatcgtaa
      901 cttgccaagg tggtgattat acaaatgaag tctatccaaa attaaaagaa accggttgga
      961 acggctattg gattgacgcg gcttctgcat tacgtatgaa agacgatgct attatcgtat
     1021 tagacccggt gaaccaacat gtgatttcag aaggcttaaa aaacggcatt aaaacatttg
     1081 taggcggaaa ctgtaccgta agcctaatgc taatggctat cggtggttta tttgagaaag
     1141 atttggtcga gtgggtttct gtagcaactt accaagccgc ttccggtgcc ggtgcgaaaa
     1201 atatgcgtga attgctttct caaatgggtg aattagaaga tagcgtaaaa gctgaattag
     1261 caaatcctgc ctcttctatt ttagatattg aacgtaaagt tacggctaaa atgcgtgcgg
     1321 aagacttccc aaccgagaac ttcggtgcgg cattgggcgg tagcttaatt ccttggattg
     1381 ataaattatt accggaaacc gggcaaacta aagaagagtg gaaaggttat gcagaaacta
     1441 ataaaatttt aggtttaagc gataacccaa ttccagttga tggtttatgc gtgcgtattg
     1501 gagcattacg ctgccacagc caagcattca caattaagct gaaaaaagat attccgttag
     1561 cggaaatcga gcaaattatt gctgcccaca atgaatgggt gaaagtaatt ccaaacgaca
     1621 aagaaaccac attgcgtgaa ttgaccccgg cgaaagtgac cggtacattg agcgtgccgg
     1681 ttggtcgctt gcgtaaatta gcgatgggtg gagaatactt agctgcattt accgtaggtg
     1741 accaattatt atggggtgca gcagagcctg ttcgccgcat tttagttcaa ttaacccaat
     1801 aattcgccac tgctctatac aagcggttgg attttgcaaa ttttttgcag aatttgaccg
     1861 cttgtttgtt ataattattt tcatcttttt tcacttttag atgaataaat tatgaaaccg
     1921 atttttcttg aaatccgcca tttgcggaca ttaatcgcat taaaagagag cggtagcgta
     1981 tctcttgcag caaagcgtgt ccatttaaca caatccgcac tttcacacca aataaaatta
     2041 ctggaagaac agtatgatct tacgctattt gagcgaaaaa gctcccctat tcgctttaca
     2101 ccagctggcg aacgtttaat taagttggcc tacgatattt tgcccaaagt cattgaggct
     2161 gaattagatt tagcccgagt gaaacaagga gaagtcggag aggtacgtgt tgcagtagaa
     2221 tgccatacct gttttgattg gctaatgccg gcaatggata ctttccgtca acattggcct
     2281 ctagttgaat tagatatcgt atcgggtttc catactgata cggttggttt gctattaagc
     2341 catcgtgcag atctggcaat tgtcgctgaa gaggaagata gtgctggtat tatatacaaa
     2401 cctctctttt catatgaaat ggtagctatt tgctctaaag atcaccctct tgccacaaaa
     2461 gatgtatggg aagctgaaga ttttaaagat gagacattaa ttacctatcc agtacctgat
     2521 gatatgctag atttactgcg aaaaatatta ggccctgctg gcatcaaagt tactcggcgt
     2581 aatagtgagt taactattgc tattattcag ctagtagcaa gtcggcgagg cattgctgca
     2641 ctaccttatt gggcggttaa accatattta gatagggggt atgtggtggc aagaaaaata
     2701 actcagcaag gactatatag caccctttat ggcgctattc gagaagccga tgctacccta
     2761 gcctacttag atgatttcca tgataccgta aaatcgcaga gttttgcgac tcttcccgga
     2821 ttgatggtat tagagtaaaa aattaacaat ttatgttagc ctaagcacaa aaaagcgaac
     2881 ttatgttcgc ttttttattt aaatttaatt taacgcccgt aaaatatcat caacacgttc
     2941 ttttgcatca ccaaatagca tttgggtatt ttctttaaag aacagtgggt tttgcacacc
     3001 ggcgtagcct actgccattg aacgtttgaa cacgataaca ttttgtgctt tccatacttc
     3061 aagcaccggc attccagcaa tagggcttga tgggtcgtct aatgcagcag ggtttacggt
     3121 atcgtttgca ccgattacca ataccacatc ggtttcttca aaatcgtcat tgatttcgtc
     3181 catctccagc actacatcat aaggtacttt cgcttccgcc aataatacgt tcatatgccc
     3241 cggtaaacgc cctgccacag ggtgaatacc aaaacgcaca ttcacgcctt tttcacgcaa
     3301 ttttgcggtg atttccgcta ccggatattg tgcttgagcc actgccatac cataacccgg
     3361 cgtgatgatc acagagcttg catttttcag catttctgcc acttcttcgg ctttcgtttc
     3421 acggtgttca ccgtattctt catcaccttt gccagactga acttcattgc caaaaccacc
     3481 ggcaatcacg ctaatgaatg agcggttcat tgctttacac ataatataag aaaggatagc
     3541 acctgatgat cccactaatg caccggttac gattaataaa tcgttgctta gcataaagcc
     3601 tgccgctgcg gctgcccaac ctgaataaga attcagcatt gaaactacca ccggcatatc
     3661 cgccccacca atagaagaaa ctaagtgcca gccgaagact aacgcaataa ttgtcataat
     3721 cagcacaggg aagatattgt gcggattatt taaaaacacg atcatcaaaa aaacagaaac
     3781 gataatggct gccaaattcc atttgtgttt atgtggaata ttcagtgctg cagaagagac
     3841 tttacgacca aataatttac cgcttagttt accaaaggca accaatgaac cggagaaggt
     3901 taccgcacca atgaaaatac ctaagaacac ttccacattg tggatattgg caagagtggc
     3961 ttgttccgct aaaaatgccg cttgtgcagt ttcatctaaa tttgcaggca ttaatgcatt
     4021 ggtatgaagt ccgtagctgt taaaaccaac caataccgct gctaaaccga caaagctgtg
     4081 tagaattgcc actaattcag gcatttcggt catttctact tttagggctt ttttcacccc
     4141 gatgaatcca ccgattgcca ttgcgattaa gatccaaatc gtgccatgtg attgcgggcc
     4201 gaaaatggtt gccactaaag caatcgccat acccacaatc ccataccaac aacctgcttt
     4261 ggcggtttcg tgtttagaaa gaccggctaa gctcataata aagagaatag ctgcaataat
     4321 gtacgcagca gtcacaaatc caaaagacat agtttcgttt ctccttaacc ttttctaaac
     4381 attgcaagca tacgttgcgt tactttaaag ccaccaaaaa tattgatgct ggcaaccaaa
     4441 atcgcaataa atgccaaaat atcaataaag aaattaccgg tcggttgggc aatttgtaat
     4501 accgcaccta cgatgataat ccctgaaatc gcatttgtta ccgccattaa tggggtatgt
     4561 agtgcgtggc tgacgttcca aaccacataa taccctacca cacaagcgag aacgaatacg
     4621 gtaaaatgcg ataaaaacgc tgccggagcc acagatgcaa gccataggaa cagcacacct
     4681 gctgctgcca tcacgccata tttcactcga gggtctgcag gtttttcctc ttttttgacc
     4741 gcttgtggtg cggctgcttg tttttgcagt tgggcagata cttgaatcgg cggagccggc
     4801 caagttaatt cgccgtcacg caccaccgtt acgccacgca acactacatc atcaaaatta
     4861 atctcaattt gaccatcttt atttggtgct aacagtttga gtaaattcac caagttagta
     4921 ccataaagtt gcgaagattg cgttggtaaa cgtgcaggaa aatcggtata gccaatcact
     4981 ttcacttgat tatcggtcac cacaatctcg ccggctttgg tgtattcaca gttaccaccg
     5041 gttgcagcgg ctaaatcaac aatcactgaa cccggtttca ttgaatcaac catctcttta
     5101 gtgattaaac gaggagcagg tttgcccgga atggcagcgg tggtaataat aatatccacc
     5161 tctttggctt gctcggcata taacgccatt gcacgacggt taaactcttc cgacatcact
     5221 ttcgcatagc cgtcacctga gccaccttct tcttcaaaat caatttcgag gaaatcagcc
     5281 cccattgatt taacttgctc ttttacttca ggacgagagt caaaggcacg cacaatcgcc
     5341 cccaggctat ttgccgcccc gattgcagcc aagccagcaa caccggctcc aattaccaac
     5401 acttttgccg gtggtacttt acctgctgcg gtaatttgcc cagtaaagaa gctaccaaaa
     5461 gcgtttgccg cttcgatcac cgcacggtaa cccgaaatat ttgccatcga acttaaagca
     5521 tcgagagctt gggcacggga aatacgaggc acagcgtcca ttgccaacac attaattttc
     5581 ttagactgca atttttccat caattgtgga ttttgtgccg gccaaataaa gctgactaag
     5641 gttacccctt ctttgattaa ctcaatttca gcttctgtcg gcgcattcac tttaaaaata
     5701 atgtctgcat tccaaacttc ttgttgtgtg ccgatatttg cacctgcatt taaaaatgta
     5761 ttatcttcaa aactggcttt aaaacctgcg tcttgttcca caagtacgtc aaagccaagt
     5821 tttttgatct gctcaacggt ttttggcgtt gccgccactc gagtttcacc gtctaacagc
     5881 tctcttggta caccaataag cataaagact cctgtatggt tgttgtgatt aaaaacgctc
     5941 taaatgtacc actaaataaa acaaataggt aaaaaattat gcccaattaa accgattatt
     6001 tcccattttt tcaaatttta agcaggctaa atttttgcta cactattaac aggctaaatt
     6061 taacaaaaaa gaaacaaaac caatgcagat tctcaaccaa attcagatca ttcttgttga
     6121 aacttcactc ccggcaaata tcggttccgc agcccgagca atgaaaacga tgggcttaac
     6181 ccatttgcga ttagtcgccc caaaacaacc gcttgatgaa caagccgaag cccttgctgc
     6241 tggggcaaaa gatgtgttgg ataacgctca atgctacgcc actttcgatg aagccattgc
     6301 cgattgccaa ctggtgatcg gcaccagtgc cagacttcgc catttgcaaa ataccctgat
     6361 tgaaccaaga gactgtggtg aattagtggt aaatcgaacc aatcttggca aagtggcgat
     6421 tgtatttgga cgtgagcgag tggggctaac caacgaagaa ttattgaaat gccagtacca
     6481 tttgaatttc ccaaccaatc ctgattatgg ttctctgaat ttggcaatgg cagtacagct
     6541 cgcaagttat gaaatccgaa tggcttattt gcaaaattct ggcgaaaaac aaccgcttgc
     6601 agcagataag gattacccaa ccgctcaagc cttagagcat ttctttgctc acaccgaacg
     6661 cttatatacc gaattaggct ttatccgcaa tgattcagtg atgctaaaac tccgccgttt
     6721 ataccaacgt gccgaactgg aaactaatga gctgaattta ctgaggggaa tgctcacggc
     6781 ggtggagaag gcaaattgac aagcggttaa tttttagtag aaatttgcaa aatccctgac
     6841 taaaacaaaa acggtaagat tactcgtttt ctctaaatca ttattttaaa ttcaacagtt
     6901 tatttgaact ttcaataata ctgcccattg tagaatcgcc ttttaattgt tcttcgctca
     6961 tcggttcgat atgccaaata tttttcgcat aatccatcac cgagcggtct gaggagaaat
     7021 agcccatatt ggcaatattg atgatggctg aacgtgtcca agctttcttg ttacgatagg
     7081 cttgagccac tttttcttga gcctccacat agctacgata atcggcacag gcttggtagt
     7141 agtcacctga atttaagatc aaatcttgat agcgatacgg atcttccggt gagaatttac
     7201 cgtttagaat ttgtgaaatt gcctcattca attcgctgtc tttttcgtag tagtgatacg
     7261 gtgagtaacc gttgtggcga agctcttcca cctgctctac ttcattaccg aaaataaaga
     7321 tgttctcttt accaacgtga tctaaaattt cgacattcgc accgtctaat gtaccaatgg
     7381 ttaaagcacc attgagggca aatttcatat tagaggttcc ggaggcctct gtacccgcta
     7441 aggaaatttg ctctgaaaca tcagctgccg gaataatcat ttgtgctaat gaaacaccgt
     7501 agttcggaat aaacaccacc ttaattaaat cattaatgcg agggtcatta ttcaccacat
     7561 ttgccacatc attaatcaaa cgaatcactt ttttcgccgc ataataagca cttgccgctt
     7621 tccctgcgaa gataaacaca cgaggtgtcc aatcagcagt cgggtttttc aagatgcggt
     7681 tataaagcgt gatgatatgc aacacgttca tttgctggcg tttatacttg tgaatacgct
     7741 taacttgtac atcaaaaatc gcttcaggat taagtttaat tccctgagtt tcttcgacat
     7801 atttggctaa gcgacgtttg ttttctactt tcaccgctgc cacctgtgct tgcacatcag
     7861 catcatcaac aaacacgttg aatttttcca attcacttaa atcagtcagc cacttattgc
     7921 cgatacattt atctaaaata ttagcaagcc ctgggttggc aattttgatc cagcggcgag
     7981 gtgtcacccc attagtcaca ttagtaaaac gatttgggta aatacgggca aaatcggcaa
     8041 aaatagattc aaccattaaa tccgagtgaa ttttcgccac accatttact ttcgctgagg
     8101 cgactaccgc aagccacgcc atacgcacac ggcgatcgcc ttgttcatca attaaggaaa
     8161 cacgagaaat caaatcgtga tcttccggga attggctacg cacttcctct aagaaatatt
     8221 cgttaatgtc gaaaataatc tctaaatggc gtggtagcac acgggctaac atttctaccg
     8281 gccaagtttc taacgcttca ctcatcaaag tgtgattggt gtagaagaaa attttacgag
     8341 tcatcgccca cgcttgttcc cagccatagc ctttttcgtc aattaaaata cgcattaact
     8401 caggcaccgc aagggttggg tgtgtgtcat ttaagtgagt tgccactttg tcggctaaat
     8461 tcacacaaga gccgaactcc gcttcgtggc ggcggataat atcttgtaca gatgccgagc
     8521 aaaggaaata ctcttggcgt aagcgtaatt cacgaccgtt ataggtagaa tcgtccggat
     8581 aaagcacacg agagacgttt tccgagctgt tttgtttaac cattgctgca aaataatcgc
     8641 cacggttaaa atcagataag ccaaaccctc tacccgatgc gtgtgcagac cataaacgta
     8701 agctgttagt tgaggtggtc tcaaagcccg ggatcagttg gtcgtgagct tgagcggtaa
     8761 tttcttcttc cggctgccat actacttttt tgccctcacg ccaagtttta ccgccaaagc
     8821 gtaccgggaa acgcttactt gaacgtagat atggccacac aaattcattc tctaaccatt
     8881 catcaggttg ctcaatttgc tccccgttgc ggatttcttg gcggaacata ccgtattcat
     8941 attgaatacc gtagccgatt gccggaattt tcattgtggc aaggctgtcc atatagcagg
     9001 cggctaaacg ccctaagcca ccgttaccta agcccggacg ccctcttcat tgataatctc
     9061 ttccagatct tgccctaact cttttaacgc agcgccaata agctcataca caccttcaga
     9121 aatcattgcg ttactgaacg tacgccccat taaaaattcc attgaaaggt aataaacacg
     9181 gcggctacca tttgcaacct ggctacggcg ggtttgtaac caatcttcgg tagataaatc
     9241 acgcactaca cgtaaggttg cattgagcca gttacgctta ctggcatcac ggggttcgac
     9301 ccctaaagcg aacaccattt tgtgcaaaat cgcattttta acatttttga tcatttctgg
     9361 gcttaatgac tgcctgctca ttgagtaaat tctcctaatt tttaatattg caagcggtcg
     9421 tttttacaaa aaaatccgca aattcgaccg cttgaaatga tgttgtgaat acaaattaaa
     9481 taatttcgtg gtataaattt tggtactgtt ctgccacttt tgcccaacca aaatcttgag
     9541 caagggcatt ctggcgaacg ctcgaccaca atttttgttt ctgccataag ctgattgccc
     9601 gcatagctgc ctctaaaaac gcaggtgcat ctgggtaatc aaatacaaat ccggtggcac
     9661 tgcggttttc aatgctctct ttatggctat ctaccaccgt atcagctaag ccaccggtac
     9721 ggcgaaccag cggtaaagtg ccatatttca gcccataaag ttgagttaat ccgcacggct
     9781 caaaacggct tggtactaga atcagatcac cacctgcaat aatttggtgc gataaagcct
     9841 cgtcataacc gattttcacc ccaatttggt tcgggtattt gtgttggaaa taacgtagcg
     9901 cattttctaa atctggcgat ccacttccca atacaataat ctgtacctta tgttgcatta
     9961 aggtatctat attggcgagt aagaaatctg cccccttctg ctcagttaaa cgagtcacca
    10021 ttaccatcaa taatgcttct ttgtcttctg gcaaaccaaa aattcgttgg agttccgctt
    10081 tatttttggc tttaccgtgc atatagttcg cacgataatt caccacaata tgtgtatccg
    10141 tttccggatt ccacacctca gcatcgaccc cgtttaaaat gccacgcaat ctaccttgat
    10201 attgacgggt tgccagtaaa ccatgcaagc ctgcaccggc aatttcctca gtaatttcac
    10261 gagcataggt cgggctaacg gtagtaatgc gatcagcaaa atacaaacct gctttgaggt
    10321 aagaaatttc accgtaaaat tctaagcctt cggcgtggaa aaattcccaa ggtaagccaa
    10381 gctctgctaa atggaaggca ttaaagcgcc cgatataggc aatattatga atagtgaaga
    10441 gcgtttttac attgcttccc caacttttaa gatatgcaca agcaagccct gcttgccaat
    10501 cgtgtgcgtg taaaacttga gcggttcccc accaatgatc caaaccttgg gctaattgcg
    10561 ccccaatgta acctaataaa gcaaagcgtt tatagttatc cggatagtct tgataattgc
    10621 tgtcgtggta agggttacca tcacgcataa ataaatgagg cgcatcgata acgtaaacgc
    10681 ctaagccatt aaaataagca aatcgaacag agactgttcc ggcaaaagtg ccgatagtag
    10741 caacttctac cgtttcccct aaagtttgcg cgactttcgg gtaataagga attaacactc
    10801 tgacatcatt accagcttgc tgttgcgcaa atggcaatgc ccccattaca tcagctaaac
    10861 cgcctgtttt aattaaaggg tacatttcag agcaaatatg taaaactttc atttttaacc
    10921 gttttctatg tgtaaaatag ttgaaaaata agaccgcttg aagcgcttta atcataacaa
    10981 tacttc
//
LOCUS       DANLXO010000093        10881 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.093, whole genome shotgun sequence.
ACCESSION   DANLXO010000093 DANLXO010000000
VERSION     DANLXO010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10881
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.093"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(50..1765)
                     /gene="proS"
                     /locus_tag="PXD69_002087"
     CDS             complement(50..1765)
                     /gene="proS"
                     /locus_tag="PXD69_002087"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDL6284245.1"
                     /translation="MRTSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLP
                     TGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGER
                     DFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDA
                     YSFHTTQESLQETYDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGE
                     DDVVFSTESDFAANIELAEAVAVGERQAPTAEMQLVDTPNAKTINELVENHGLAIEKT
                     VKTLVVKGATEEQPLIALVIRGDHELNEIKAQKHPLVADPLEFADEAEIKAKIGAGVG
                     SLGVVNMPIPVIIDRSVALMSDFGCGANIDGKHYFNVNWERDVAVPEIADLRNVVEGD
                     PSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVV
                     AAAIEQHYDDRGIIWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQGVEVIF
                     DDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLLAFLK
                     ANVKA"
     gene            complement(1929..2090)
                     /locus_tag="PXD69_002088"
     CDS             complement(1929..2090)
                     /locus_tag="PXD69_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284246.1"
                     /translation="MEQKLNNVFGGIMFKEKDYDEYLEAKVKKGQIFTLEQANAEWQE
                     IIEQIEREN"
     gene            complement(2143..4026)
                     /gene="htpG"
                     /locus_tag="PXD69_002089"
     CDS             complement(2143..4026)
                     /gene="htpG"
                     /locus_tag="PXD69_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDL6284247.1"
                     /translation="MANNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAA
                     DKLRFKALSEPALYEGDGELRVRVSVDETLGTITIADNGIGMTREQVIDHLGTIAKSG
                     TKEFLNALGTDQAKDSQLIGQFGVGFYSSFIVADKVTVKTRAAGVPAEQGVIWESAGE
                     GDYTVADLEKKERGTEIILHLREDEKEFLNEWRLREIIGKYSDHIGLAVEIQTNEYDD
                     EGKASGQKWEKINKAQALWTRSKNEISDEEYTEFYKHLSHDFADPLIWSHNKVEGKQE
                     YTSLLYVPSKAPWDLFQREQKHGLKLYVQRVFIMDDAEVFMPNYLRFMRGLLDTNDLP
                     LNVSREILQENKVTQSLRSALTKRALQLLEKLAKDDAEKYAQFWQAFGVVLKEGVGED
                     FANKQQVAGLLRFASTQRDDSEQAVSFADYIARMKEGQKAIYFLTADSYQAAKNSPHL
                     ELFHKKGIEVLLLSDRIDEWLVSHLTEFDGKPLQSITKSDLDLGELADKQEEESQKAQ
                     QAEFGSFLERAKGYFGERVKNVVLTHRLTDTPAVVSTDSDEMTTQMAKLFAAMGQQAP
                     EVKYTFELNPDHPMVKKVADLADEAEFADWIELLFEQALLAERGTLENPTAFIKRVNK
                     LLG"
     gene            4190..4477
                     /locus_tag="PXD69_002090"
     CDS             4190..4477
                     /locus_tag="PXD69_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL6284248.1"
                     /translation="MAITITSREFNQNASKVLKMAEKEPVFITKWGKIVNVVSSYMDY
                     QQKKPSEPSFEELFASSENEDVSDEFWQEFEQTLVEIRKSNKPRPVDFGDE"
     gene            4477..4905
                     /locus_tag="PXD69_002091"
     CDS             4477..4905
                     /locus_tag="PXD69_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL6284249.1"
                     /translation="MYRYLFDTNIVSELYKLRNDKMDVNVRQWLRGVNPSQTNISCIT
                     LSEIKTGILLKARKDKEQSDRLNDWFENNVLKAYQTKAFVVNNDIALLASEYHIPNKM
                     DLNDAYIAATAKYHNLILVTRNTKDFIRCDVRLFNPFETA"
     gene            4909..6990
                     /gene="recG"
                     /locus_tag="PXD69_002092"
     CDS             4909..6990
                     /gene="recG"
                     /locus_tag="PXD69_002092"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDL6284250.1"
                     /translation="MSEQLLDGVPLTALSGVGAAISEKLSRIGINNVQDLLFHLPMRY
                     EDRTRITPIADVRPESFATIEGYVQLTEVQFGKRPILSVTLSDSTSKIMLKFFNFNAG
                     MKNSLATGVRVKAFGEIKRGRFMAEIHHPEYQIIRDNQPLVLAETLTPIYSTTEGLKQ
                     ASLRKLTEQALALLEKVKVAELLPDEYNPHKYSLKEALQLLHRPPPTISAEVLEKGDH
                     PAQKRLIFEELLAHNLAMQQLRLGVKQQYAEALTYQTDIKQRFLDSLPFKPTHAQSRV
                     TADIEQDLAKPHPMMRLVQGDVGSGKTLVAALAALLAIDNGKQVALMAPTEILAEQHA
                     NNFANWLNPFGIEVGWLAGKVKGKARTAQLEAIKNGDVQMIIGTHALFQDNVEFHHLA
                     LVIIDEQHRFGVHQRLTLREKGAKENNYPHQLIMTATPIPRTLAMTVYADLDTSIIDE
                     LPPGRTPITTVVISEDRRAEIVQRVYQVCKQEHRQAYWVCTLIDESEVLEAQAAAAIA
                     EDLQRALPDLRIGLVHGRLKPQEKQAIMAEFKAANLDLLVATTVIEVGVDVPNASLMI
                     IENSERLGLAQLHQLRGRVGRGATASHCVLMYKPPLGKISSKRLQVMRDSQDGFYIAE
                     KDLEIRGTGEILGTKQTGMAEFKVADLMRDRKMIPLVQRYAKQIISENQPLAEALIKR
                     WLDNKAEYTNA"
     gene            complement(7012..7946)
                     /locus_tag="PXD69_002093"
                     /pseudo
     CDS             complement(7012..7946)
                     /locus_tag="PXD69_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250489.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
     gene            complement(7999..9651)
                     /locus_tag="PXD69_002094"
     CDS             complement(7999..9651)
                     /locus_tag="PXD69_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDL6284251.1"
                     /translation="MTIFQVAQNWLAQDPDAETRAELEQLIQAAESDEKAKAELTARF
                     DGRLQFGTAGLRGRLQAGSMGMNRVLVAQAASGLAGFIKGYDKEPSIVIGYDGRKNSD
                     VFARDTAEIMAAAGIKTYLLPRKLPTPVLAYAIQYFDTTAGVMVTASHNPPEDNGYKV
                     YLGKANGGGQIVSPADKEIAALIDKVAAGDIRDLPRSQDFTVLDDEVVNAYIEKTASL
                     AKRPKAEINYVYTAMHGVGYEVLSKTLEKAGLPQPYLVSEQIQPDGSFPTVNFPNPEE
                     KGALDLAIKLAKEKNAEFIIANDPDADRLAVAVPDAQGNWKPLHGNVIGCFLGWYLAK
                     QFHAQGKQGVLACSLVSSPALAEIAKKYGLSSEETLTGFKYIGKVENLLFGFEEALGY
                     LVDPDKVRDKDGISAAIMFLDLVCSLKQEGKTLADYTTEFVQEFGAYVSGQISIRVCD
                     LAEIGKLMTALRNNPPSEIGGFKVAEFIDHTKTTRQNDILVFVLENGSRLIARPSGTE
                     PKIKFYLDARGTDAENAEQVLAQFDESVRSLLRQEEYGKQDC"
     gene            complement(9803..10864)
                     /locus_tag="PXD69_002095"
     CDS             complement(9803..10864)
                     /locus_tag="PXD69_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6284252.1"
                     /translation="MAIYAIWNNKGGVGKSYLTFQIACEYAKQYPAKKVLVVDLCPQA
                     NSSSMLLGGIEKGEQELAKIHSQVNKNTISGYISERLVSPYRSINSATKYVTQVSTIN
                     EYVPKNVYLVVGDEELEIQSSGILHASQAVHVPDSWRLVHLWVRDLVSDIQNAWDNDD
                     NVVFIDCNPSFTIYTELALAASDRLIIPFSADGSSKRAVKSVLSLVYGVKRHSGDVSS
                     HFYTESQKSKLALPQIYMYVGNRLTINAKASATAFKTVVEEIGDEIYNIWKTNANLFC
                     IHPAGVGTPTNKSSFRKMFQYEVRDANTASVVSGALGIPISRLSSGKRDVLGKNVMVN
                     QSQLDAQVPNIQNLVQCIE"
BASE COUNT         2988 a         2565 c         2229 g         3099 t
ORIGIN      
        1 gctttatatt aaagggcgta ttttatacgc ccaattttgt tatttataat taagccttta
       61 cattcgcttt taagaacgca agtaagctct ctttggcgat catctgtttt tcaccgctgc
      121 ggcggttttt gtattcgatt tcgccgttct cgaggttttt ctcaccaata accaccatat
      181 gcggcacacc gataagctcc atatccgcga acatcacgcc cgggcgttct ttacgatcat
      241 caaaaatcac ctcaacgcct tgagctttta agttagcgta taactcttca gcgaatgcct
      301 gcactttttc cgatttgtgc atattcatcg gcacaatcgc caccgtaaat ggcgccattt
      361 catcacaagg ccagataata ccacgatcat cataatgttg ttcaatcgca gctgccacca
      421 cacgggtaac gccgataccg taacaaccca ttgtcatcac tagcggttta ccgtcttcac
      481 cttgcacagt ggctttcatt gcttctgagt attttttgcc taattggaaa atatgcccta
      541 cttcaatacc tcgtttgatt tgaagtgtgc ctttaccgtc cgggcttggg tcgccttcca
      601 ccacattgcg taaatctgca atttccggca cagcaacatc acgctcccag ttcacgttaa
      661 agtagtgttt gccatcaata ttcgcaccgc agccaaaatc tgacatcaac gccactgagc
      721 ggtcaataat caccggaatc ggcatattca ccacacctaa cgagccaaca ccggcaccga
      781 ttttggcttt aatttccgct tcatcggcaa actcaagcgg atcagccacc aacgggtgtt
      841 tttgagcttt aatttcgttt aactcgtggt cgccacgaat cactaacgca attaacggtt
      901 gctcttcagt tgcccctttc accactaagg ttttcaccgt tttttcaatg gctaaaccgt
      961 gattttctac taattcattg atggttttcg catttggcgt atccactaat tgcatttctg
     1021 ccgttggtgc ttggcgttca cccaccgcaa ccgcttcggc taattcaata ttggcagcaa
     1081 aatctgattc ggttgaaaat accacatcat cttcaccgct tgaggctaac acttggaact
     1141 cgtgagaggc tgaaccgccg atagagccgg tatctgcctg caccgcacgg aaatctaagc
     1201 ccaaacgggt gaaaatattg ctgtaaacct gatacatcac atcataggtt tcttgcaggc
     1261 tctcttgtgt ggtgtggaaa gaataggcat ctttcatcac aaattcacgc gaacgcatta
     1321 ccccgaaacg agggcggact tcatcacgga atttcgtttg aatttggtat aaattcagcg
     1381 gaagttgttt gtacgaagaa acttcacggc gaaccaagtc ggtaatcact tcttcgtgag
     1441 tcgggccaag cacgaaatca cgctcgccac gatctttaaa acgtaataat tccgggccgt
     1501 aatcattcca acgaccggat tccacccata attccgccgg ctgaaccacc ggcattaata
     1561 cctcgatagc cccgcctttg ttcatctctt cacgaataat attttccact tttttcaaca
     1621 ctttgatccc ggtcggcaac cagttgtata aacctgacgc catcgggcga atcattccgg
     1681 cacgcaacat taattgatgg ctaactactt gtgcatcatt cggcatttct ttaagggttg
     1741 aaaataaata ttgacttgta cgcattgcta ttcctattct ttttaaactt tgaaacctga
     1801 aaaaatctgc ttattttaaa acaaagcggt taaattttca ggaaattttg caaaatccta
     1861 taaaaaaata accgcttgta agcggttatt ttgttttaac taagggtatt ttcttaaact
     1921 gtgtatgctt aattttctcg ttcaatttgc tcaataatct cttgccattc ggcatttgct
     1981 tgttcaagag taaaaatctg accttttttt actttagcct ctaaatattc atcataatct
     2041 ttttctttaa acattattcc cccgaataca ttgtttaatt tttgttccat tatatattga
     2101 atatggaaaa acggaaacct agatttccgt ttttagtaat ggctagccca acaatttatt
     2161 tacccgttta ataaaggctg tcgggttttc caacgtgcct cgttcagcaa gcagagcttg
     2221 ttcaaacagc agttcaatcc aatcggcgaa ctcggcttca tcggcaagat cagctacttt
     2281 tttcaccatt gggtgatctg ggttcagctc aaaagtatat ttcacttctg gtgcttgttg
     2341 ccccattgct gcaaacagtt ttgccatttg ggtggtcatt tcatcgctgt cagtggaaac
     2401 cactgccggt gtgtcggtta agcggtgagt cagcaccacg tttttgaccc gttcaccaaa
     2461 gtagcctttc gcccgttcta agaacgaacc aaactccgcc tgttgggctt tttggctctc
     2521 ttcttcctgc ttgtcggcaa gctcgcctaa gtctaagtcc gacttggtaa tgctttgtag
     2581 cggtttgccg tcaaactcgg tgaggtggct aaccaaccat tcatcaatgc ggtcagaaag
     2641 cagtagcacc tcaatgcctt ttttgtggaa cagctctaag tgcgggctgt ttttagccgc
     2701 ttggtagctg tctgcggtta agaagtagat cgctttctgc ccctctttca ttcttgcaat
     2761 ataatcggca aaactgaccg cttgttcgct gtcatcacgc tgggtggagg caaaacggag
     2821 taagcctgca acctgttgtt tgttggcaaa gtcttcgccc acgccctctt taagcaccac
     2881 gccgaacgct tgccagaatt gggcatattt ttcggcatcg tctttcgcca atttttccag
     2941 cagttgtaac gcacgcttgg ttaaggcaga acggagcgat tgggtaactt tattctcttg
     3001 cagaatttca cggctgacgt tgagcggcag gtcgttggtg tcgagcaagc cacgcataaa
     3061 acgcaagtag ttcggcataa agacttccgc atcgtccata ataaatacac gctgaacgta
     3121 gagtttcaag ccgtgttttt gctcgcgttg gaacagatcc cacggggctt tgctcggcac
     3181 atacagcaag ctggtgtatt cttgcttacc ttcgacttta ttgtgcgacc aaatcagcgg
     3241 gtcggcaaaa tcatggctga ggtgtttgta aaattcggtg tactcctcgt cactaatctc
     3301 attttttgag cgtgtccaaa gcgcttgagc tttgttaatt ttttcccatt tttgaccgct
     3361 tgctttgccc tcgtcatcgt attcattggt ctgaatttcc accgccaggc cgatatggtc
     3421 ggagtatttg ccgataatct cacgcaaacg ccattcgttt aaaaactctt tttcgtcctc
     3481 acgcaagtga agaatgattt ccgtgccacg ctcttttttc tccagatcgg caacggtgta
     3541 atcgccctca ccggcagatt cccaaatcac gccttgctcg gcaggcactc cggcggcacg
     3601 ggttttgact gtcactttat ccgccacgat gaaagaagag taaaagccca cgccgaactg
     3661 cccgataagc tggctgtctt tggcttgatc agtgccgagt gcgttcaaaa attctttggt
     3721 accagatttt gcaatcgtac cgagatggtc gatcacctgc tcacgggtca taccgatacc
     3781 gttatcggca atcgtaatcg taccgagtgt ttcatcaaca gagacacgca cacgcagttc
     3841 gccatcacct tcatacaaag ccggctcgga aagggcttta aaccgcaatt tatcggcggc
     3901 gtcagaggcg ttggaaataa gctcacgcag gaaaatttct ttgttggagt aaagcgagtg
     3961 gatcatcagt tgcaataact gtttcacttc cgactggaag ccacgggttt cttgattatt
     4021 tgccattgtg tattccttta ttcattaaaa aacagggaat agatggggca agtggtcaga
     4081 ttttcaagat tttttgcaaa atatctgttg ccaaatagcg aattaattga aagatattac
     4141 tacatttaat aaaatacact catcttttta ctacattttg gagagcgata tggcaataac
     4201 cattacttcc agagaattta atcaaaatgc cagcaaagtg ttaaaaatgg cagaaaaaga
     4261 gccggttttt attaccaaat ggggcaaaat cgtcaatgtg gtgtctagtt atatggatta
     4321 tcagcagaaa aagcctagcg agccaagctt tgaagagcta ttcgcctctt ccgaaaatga
     4381 ggatgtgagc gatgaatttt ggcaagagtt tgaacaaaca ttggttgaaa tccgcaaaag
     4441 caataaacca agacctgttg attttggaga tgagtaatgt atcgctacct ttttgatacc
     4501 aatatagttt ccgagcttta taagttaaga aatgacaaga tggatgtcaa tgttcgccag
     4561 tggctgagag gggttaatcc tagccagacc aatatcagct gtattacgtt atctgaaatc
     4621 aaaacaggta ttttgctgaa agcccgcaaa gacaaagaac aatcagaccg attaaatgat
     4681 tggtttgaaa ataatgtatt aaaggcttat caaacaaaag cgtttgtggt gaataacgac
     4741 attgctctat tggcatcaga gtaccatatt cccaataaaa tggatttaaa tgatgcttat
     4801 attgcggcaa ccgccaaata ccacaatctg attttagtca cccgcaacac caaagatttt
     4861 atccgttgtg atgtgcgttt atttaaccca tttgaaaccg cataaataat gagtgaacaa
     4921 ttattagacg gcgtgccatt aaccgccctt tccggcgtag gagcggcaat ttccgaaaag
     4981 ttaagtcgaa tcggcattaa taatgtgcag gatttactgt ttcatctgcc aatgcggtat
     5041 gaagatcgca cccgtattac cccgattgct gatgttcgcc cggaaagctt tgccaccatt
     5101 gaaggctatg tacaacttac cgaagtccag tttggtaaac gcccgatttt atcggttaca
     5161 ctctccgaca gcaccagcaa aattatgctt aaattcttca atttcaatgc tggaatgaaa
     5221 aatagccttg ccaccggcgt tcgggtaaaa gcctttgggg aaattaagcg tgggcgattt
     5281 atggcggaaa ttcaccaccc tgaatatcaa attattcggg ataatcaacc gcttgtactg
     5341 gctgaaaccc tgaccccgat ttactccacc actgaggggt taaaacaagc ctcgctgcgg
     5401 aaattaaccg agcaagccct cgctttatta gagaaagtga aagtcgccga gctgttgcct
     5461 gatgaataca atccgcacaa atacagccta aaagaagcgt tgcagttatt gcaccgccca
     5521 ccgccgacga tttctgccga agtcttggaa aaaggtgacc accctgctca aaaacggctg
     5581 atttttgaag aactgctggc acacaattta gcgatgcagc aactccgttt aggggtaaaa
     5641 cagcaatatg cagaggcact tacttaccaa accgatataa aacagcgttt tctcgacagt
     5701 ttgcctttta agcctactca cgcacaaagc cgagtaaccg cagatattga gcaagatctt
     5761 gccaaaccac acccgatgat gcgactggta caaggcgatg ttggttcagg taaaacctta
     5821 gtagccgcct tggcagcact attagcgatt gataacggca agcaggtggc attaatggca
     5881 ccgaccgaaa ttcttgccga acagcacgcc aataattttg ccaactggct taatcccttt
     5941 gggattgagg ttggctggct tgccggtaaa gtgaaaggca aggcgagaac cgcacaactt
     6001 gaggcaatca aaaacggtga tgtgcagatg attatcggca ctcacgccct gttccaagac
     6061 aatgtggaat ttcaccattt agcgttggtg attattgatg aacaacaccg ttttggcgta
     6121 caccaacggc tgaccttgcg ggaaaaagga gcgaaagaaa ataactatcc gcatcagctc
     6181 attatgacgg cgacccccat tccgagaacg ctggcaatga cggtctatgc tgacctcgac
     6241 acctcaatca ttgacgaact gccaccgggt agaacgccaa tcacgactgt ggtgatttct
     6301 gaagatcggc gagcagaaat cgtccaacgg gtgtaccaag tctgtaagca agaacaccgc
     6361 caagcctatt gggtctgcac cctgattgat gaaagcgaag tgttggaggc tcaagccgcg
     6421 gcagcgattg ccgaagattt acagcgagcc ttgccggatt tacgcatcgg gttagtacac
     6481 ggacggctga aaccacagga aaaacaagcg attatggcgg aatttaaggc agcgaattta
     6541 gatttgctgg ttgcgaccac cgtaattgaa gtgggagtgg acgtgccgaa tgctagccta
     6601 atgattatcg aaaattccga acgactcggg ctggctcaac tccaccagtt gcgtggacgt
     6661 gttgggcgag gggcaaccgc ctcgcattgc gtcttaatgt acaaaccgcc gctcgggaaa
     6721 atttccagca agcggttaca agtgatgcgt gatagccaag acggtttcta cattgccgaa
     6781 aaagatttgg agattcgagg cacaggcgaa attctcggca caaaacagac cggaatggca
     6841 gaatttaagg tggcggattt aatgcgagac cgcaaaatga ttccgctggt gcaacgttac
     6901 gccaagcaaa ttattagcga aaatcaaccg cttgcagagg cgttaattaa gcgttggtta
     6961 gacaacaagg cggaatatac caacgcttaa ccggcaagcg ggttatttag attacggcag
     7021 gtttttcacc gattcaatta ccaaatccca aaagcgggat ttgtctaatt tttttgctac
     7081 ccaagtatta cactgttttg gcgggtagcg gaaatccgcc accgtcatac ccagtgtatg
     7141 cgtgcctgtt agctcaatat tgaccggcac ttgctgaact tcaatcaggc ttgggtcaat
     7201 cacatacgcc accgcacagg catcgtgaac cggtggagca tcaaagcctt gagcctgttt
     7261 atacattttg gcgaagaacg ccagcaattc caccacaaac tgccccgatt tgctgtttaa
     7321 tgccttaaag cgttcaacca catcgggggt cgcaagtgct tggtgagtta agtctaagcc
     7381 gaccatcgtc accttccaac cggcattaaa cacaatatga gcagcttccg ggtcaatttt
     7441 aatattaaat tctgccaccg cactccagtt gccggtgtga taacctccgc ccatcagcac
     7501 cacttctttc actctttcaa taatacgggg ctcaaggcgg gcagctagag caatattggt
     7561 tattgcccac cggtcggcac taaggtaatg cttttctccg ggtgcgacat tatcaaatca
     7621 ataattaatt gagcggcgtg ttttttctca aattgtcggg tagattcagg gagtacaggc
     7681 ccatccattc ccgaatcacc gtgaatatcc ggggcatttt ccacttcacg caccagcggt
     7741 ctggcacaac ctttggcaaa aggaacgttg caaatatgag caatttccgc aaccgccaac
     7801 gcattacgcg atactttttc taaggtttga ttacctacca ccgtagtcac tgccaacaaa
     7861 tcaatattcg gattccccca agcgagcatc atcgcaatcg catcgtcatg ccccggatca
     7921 caatctaaaa taattttttg agccattatt gtctccttta aaaaagggag agcctaagct
     7981 ccccctcaat taatgccatt agcaatcttg tttgccgtat tcttcttggc gaagcagcga
     8041 acgcacactt tcgtcaaact gagccagcac ttgctctgcg ttttcagcgt ctgtgccacg
     8101 agcatctaaa tagaatttaa ttttcggctc agtacctgaa gggcgagcaa tcaaacggct
     8161 gccattttcc aacacaaaca ctaaaatgtc attttggcgt gtggttttgg tatggtcaat
     8221 aaactcagcc actttaaagc caccaatttc gcttggagga ttgttgcgta acgccgtcat
     8281 taatttgccg atttcggcta aatcacaaac tctgatcgaa atttgaccgc ttacataagc
     8341 cccgaactct tgtacaaact cggtggtgta atccgcaagg gttttacctt cttgtttgag
     8401 gctgcacact aaatctaaga acataatggc agcggaaatg ccgtctttat cacgcacttt
     8461 gtctgggtca accaaataac ctaaggcttc ttcaaagcca aataataggt tttcaacttt
     8521 tccgatatat ttaaagccgg ttaaggtttc ttccgagctt aaaccatatt ttttcgcaat
     8581 ttcagctaac gccggagagg atactaacga gcaagccaac acgccttgtt taccttgtgc
     8641 gtggaattgt ttggctaaat accagcctaa gaaacagccg atcacattgc catgcagtgg
     8701 tttccagttg ccttgagcat caggcacggc taccgctaaa cggtcagcat ccgggtcgtt
     8761 ggcgataata aattcggcat ttttctcttt cgccaattta atcgctaaat ctaacgcccc
     8821 tttctcttcc gggttcggga aattaaccgt tgggaacgaa ccgtccggct gaatctgctc
     8881 actaactaaa tacggttgcg gtaagccggc tttttctaat gttttgctta acacttcata
     8941 gcccacaccg tgcattgcag tgtaaacgta gtttatttcg gcttttggcc gtttggctag
     9001 tgaggcggtt ttctcaatat aagcatttac cacttcatcg tctaacaccg tgaaatcttg
     9061 gctacgaggt aaatcacgaa tatcgcctgc tgctacttta tcaatcagag cagcaatttc
     9121 tttatctgcc ggcgaaacaa tttgtccgcc accgttggct ttacctaaat aaactttata
     9181 gccgttatct tccggtgggt tgtggctggc agttaccatc acaccggctg tggtatcaaa
     9241 atattgaatc gcataggcaa gcactggtgt tggcaatttg cgaggaagca ggtacgtttt
     9301 aatgcctgcc gctgccataa tttcagcggt gtcacgggca aacacatcgg aatttttacg
     9361 accgtcataa ccaataacaa ttgacggctc tttatcataa cctttaataa acccagctaa
     9421 accgctggca gcttgtgcca ccaaaacacg gttcataccc attgaacccg cttgtaagcg
     9481 accacgcaaa ccagccgtac caaactgtaa acgtccgtca aaacgggctg ttaattctgc
     9541 ttttgctttc tcgtccgatt ctgccgcttg aattaactgc tctaattccg cacgggtctc
     9601 tgcatccggg tcttgggcta accaattttg tgcaacttgg aaaatagtca ttttttactc
     9661 ctatgtaatt taaaaactct gtttagatta gcccaaagtc cttttattta aaaggagata
     9721 tttctttttt tgtgatcgag ctatcaaata aaaagatttg tcagaaataa aaaatagcgt
     9781 acttaatata cgctattttt ctttattcta tacactgaac aagattttga atgttaggaa
     9841 cttgagcatc taattgtgac tgattcacca ttacattttt acctaaaaca tctctttttc
     9901 ctgatgataa gcgactaatt ggaataccta aagcacctga aacaacagat gctgtatttg
     9961 catctctcac ctcatactga aacatttttc tgaagcttga tttatttgta ggagtaccaa
    10021 cacctgctgg gtgaatacag aacaaattag cattagtttt ccatatatta tagatttcat
    10081 cacctatttc ctctacaact gttttaaatg cggttgctga tgctttggca tttatcgtta
    10141 atctattacc tacatacata taaatttgag gtaatgctaa cttactcttt tgagattctg
    10201 tataaaaatg agagctgaca tccccagagt gccttttaac cccatatact agagataata
    10261 cagacttaac agctcgtttt gatgaaccat cagcggaaaa agggatgatc aatctatctg
    10321 aagcagccaa cgctaattca gtataaatag tgaaacttgg attgcaatca ataaatacaa
    10381 cgttatcatc attatcccaa gcgttctgta tatcagaaac taaatcacgc acccaaagat
    10441 gcactagccg ccaagaatca ggaacatgaa cagcttggga agcatgtaaa ataccagatg
    10501 attggatttc taattcctca tcaccaacaa caagataaac attttttggt acatattcat
    10561 ttatagtgct aacttgagtt acatatttcg ttgcactatt aatagaacgg taaggactta
    10621 ctaatctttc tgaaatatat cctgaaatag tattcttgtt tacttgagaa tgaatttttg
    10681 ctaactcttg ctcacctttt tcaatgccgc ctaatagcat agatgatgaa tttgcttgag
    10741 gacataaatc aacaacgaga actttttttg ctgggtattg ttttgcatac tcacaagcga
    10801 tttgaaaagt taaataactt ttaccaaccc cacctttatt attccatatt gcataaatag
    10861 ccataatgcc ccctctttta a
//
LOCUS       DANLXO010000094        10672 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.094, whole genome shotgun sequence.
ACCESSION   DANLXO010000094 DANLXO010000000
VERSION     DANLXO010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10672
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.094"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            8..1114
                     /locus_tag="PXD69_002096"
     CDS             8..1114
                     /locus_tag="PXD69_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HDL6284253.1"
                     /translation="MNKLIASLVASSCATAFAAPVQQNNFHTTTHTYEFTQSYDLVVP
                     QGSKGTTNLWIPLPSDTDYQTVKSIEFEGSYKNAYITENNAYGAKTLFATWDTDAPKR
                     DLKVKMVIQTQDREPMAQGALANYQMPEKITYSVDVLEYLKPTAHIKTDGIVKEYADK
                     IVGNEQNPLKKAELIHKWIVDNMERDNSVLGCGDGDVEKILTTKVLKGKCTDINSVFV
                     ALARASNIPAREVFGIRLGQAVKMGQYSKTAFGSSKDGVANESGGQHCRAEFYLAGFG
                     WVPVDSADVAKMRLAEKKDVDDADVQAVSKYLFGNWEMNWVGFNHGRDFDLYPQPELT
                     PLNNFGYPYAEVGGDPLNSFEAKEFGYEFISKEL"
     gene            1089..1457
                     /locus_tag="PXD69_002097"
     CDS             1089..1457
                     /locus_tag="PXD69_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284254.1"
                     /translation="MNSSLKSYNHKFITMCVTAIVSAVTSTFCCIGPLVYLVFGISSP
                     WLMELNQLEFLQLPMLLISLAAFGYGFWLLNFSNKIICTKYFSRRTLVILYWVVSVVV
                     MFFLTYPYVLPYILEMWSGE"
     gene            1459..1767
                     /locus_tag="PXD69_002098"
     CDS             1459..1767
                     /locus_tag="PXD69_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL6284255.1"
                     /translation="MKKYIATMLLAFGLVHSSYAQEKTAQIETKQAEKTVVLHIPEMY
                     CQLCVYLVNKELRAVEGVISTKASMKERKATVVVKESVDNQALIQAVGNLKYTAKVIE
                     "
     gene            2005..2559
                     /gene="srlA"
                     /locus_tag="PXD69_002099"
     CDS             2005..2559
                     /gene="srlA"
                     /locus_tag="PXD69_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725059.1"
                     /note="catalyzes the phosphorylation of incoming sugar
                     substrates along with their translocation across the cell
                     membrane; the IIC domain forms the PTS system
                     translocation channel and contains the specific
                     substrate-binding site; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HDL6284256.1"
                     /translation="MIEAITHGAEWFIGLFQKGGETLVGMINGILPLLISLLVVMNAL
                     IKFVGQDRIERLAQRSAGNPISRYLILPVIGTFVFCNPMTLSLGRFLPERYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAISYLLVGMFTNFFRGWI
                     TDFTTAFFEKRMGITLDREVHLSH"
     gene            2590..3591
                     /locus_tag="PXD69_002100"
     CDS             2590..3591
                     /locus_tag="PXD69_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HDL6284257.1"
                     /translation="MSNKAIYIEKGNGGWGGPLTLPVVEGKKVLYMTGGTRPAIVNKL
                     VELTGWEAVDGFKEGEPPAEEIGIAIIDCGGVLRCGLYPKRRIPTINIHSTGKSGPLA
                     EFIVEDIYVSAVKENNIRLIDADGSVPVATEQAKPTSSTTATAKEYDSSKKITEQSDG
                     LLAKIGMGMGSVAALFFQAGRDTIDTVLKTILPFMAFVSALIGIIIASGLGDVIAHGL
                     TPLANSPIGLVTLALICSFPLLSPFLGPGAVIAQVIGVLVGTQIGLGNIPPHLALPAL
                     FAINAQAACDFIPVGLSMAEAKQDTVRVGVPSVLVSRFLTGAPTVLIAWAVSAFIYQ"
     gene            3636..4034
                     /gene="srlB"
                     /locus_tag="PXD69_002101"
                     /gene_synonym="gutB"
     CDS             3636..4034
                     /gene="srlB"
                     /locus_tag="PXD69_002101"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HDL6284258.1"
                     /translation="MHRLSKRENIYMTIIYQTTFTKIGNFAQESLTDDMLITFKQGAP
                     ADLQDYCFIHNPSELSSPLEVGDIAEFDGVAYPITAVGSVASENLSALGHITFRFDGA
                     NDAEFPGSVHVIGTPPQGLTENSTLIIKRD"
     gene            4082..4870
                     /gene="srlD"
                     /locus_tag="PXD69_002102"
     CDS             4082..4870
                     /gene="srlD"
                     /locus_tag="PXD69_002102"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HDL6284259.1"
                     /translation="MNNEKKVAIVVGGGQTLGAFLSEGLADAGYRVVVADLNGENAQK
                     VAADINAKQGEGNAIGVQVDAADEPSVEALAKATDTVFGRADVLVYSAGTAKASPIWD
                     FNLNDFDLSVKVNLTGYFLTAKHFSRLMIRDGIKGRIIQINSKSGKVGSKYNSGYSAA
                     KFGGVGLTQSLALDLADKGITVHSLMLGNLLKSPMFQSLIPQYAAKLGIPESEVEQVY
                     IDKVPLKRGCDYQDVLNVLKFYAGEEAAYCTGQSINITGGQVMF"
     gene            5039..5419
                     /gene="gutM"
                     /locus_tag="PXD69_002103"
     CDS             5039..5419
                     /gene="gutM"
                     /locus_tag="PXD69_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HDL6284260.1"
                     /translation="MDSITLLIILAMIMWLLQAVLGWLQIKAFNQAFMEISKKGKVTV
                     GRNSGRFNPKSVIVLAFDDEKKVVDSLCMKGFSVFARPQKLASVIGLSLDQIVPEKIF
                     PSDKRSQFALKVAISSGYSCSDQK"
     gene            5482..6129
                     /gene="hxpB"
                     /locus_tag="PXD69_002104"
     CDS             5482..6129
                     /gene="hxpB"
                     /locus_tag="PXD69_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HDL6284261.1"
                     /translation="MQINSVIFDMDGVMIDSEPQWAEAQIAVLADLGINITEQDCEQL
                     TRGKRIDELSDTWIKKFQLSVSNQALSEAILAHGCAAIEQHGKALTGLYELLDFLKSN
                     QIKLAVATSSPPVVIKAVFDRLKLWDYFPIRCSAMDEEYGKPHPAVYLSAVKKLGIEK
                     QECIVIEDSVTGLIAAKAANLTTFLVNTDYQNEKFSIADKRMASLLDVIEKLKQH"
     gene            6172..6969
                     /locus_tag="PXD69_002105"
     CDS             6172..6969
                     /locus_tag="PXD69_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor"
                     /protein_id="HDL6284262.1"
                     /translation="MKPFERRQQILAYLAQHGRTEVDVLADYFKLTGATIRKDLTSLE
                     EDKKVLRTYGSVVLIDEEILEREEKINKEDKDDKPLAQKTGINLQQKQAIGQKAAELI
                     NEGNSIIFDAGSTVLQMIPHLKAFDNLSLMTNSLTIFNEILKLNKSYNLLISGGTFRE
                     KSASFHGYFAESAFIGSNFDILFIGTDGLDLDVGLTTFNEVYKVSSLMCDAANKIVLL
                     ADSSKFGRKSPNIVCGLEKIHTIITDEGLSQEMREQIKAKGIELLVV"
     gene            6980..7915
                     /locus_tag="PXD69_002106"
     CDS             6980..7915
                     /locus_tag="PXD69_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDL6284263.1"
                     /translation="MNHLDSAKETLNLYAQQIITLNHRLSEEFNEVVNMILACQGRVV
                     VGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDMVILISNSGETDD
                     VNKLIPSLKNFGNKIIAMTGNPYSTLGRNADVILNIGVEREACLNNLAPTSSTLVTMA
                     LGDALAIALMKARDFRPEDFARYHPGGSLGRKLLNRVRDVMVRKVPTASLDTTFTECL
                     SVMNEGRMGVAVIMQDDKLEGIITDGDIRRTLAKFGAESLNKTADEIMTRNPKTINDT
                     EFLAKAEDLMKELKIHSLIAVNDEGKVTGLMEFSS"
     gene            complement(7959..8509)
                     /locus_tag="PXD69_002107"
                     /pseudo
     CDS             complement(7959..8509)
                     /locus_tag="PXD69_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005752768.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            8811..10670
                     /locus_tag="PXD69_002108"
     CDS             8811..10670
                     /locus_tag="PXD69_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HDL6284264.1"
                     /translation="MSNLKVKVQGFGRFLSNMVMPNIGAFIAWGFITALFIPTGWLPN
                     ETFAKLVGPMITYLLPLLIGYSGGKLVGGERGAVVGAITTMGIIVGSEIPMFLGAMIV
                     GPLGGWAIKTFDKAIDGKVKSGFEMLVNNFSVGIIGMILAMLSFAFIGGIVTQISAAL
                     GAGVGALVEAGLLPVTSIIVEPAKILFLNNAINHGVFTPLGTAQAQEVGKSILFLIEA
                     NPGPGFGILLAYMFFGRGTAKQTAGSASIIHFLGGIHEIYFPYVLMSPRLILAVIAGG
                     ATGVLTNSLLGGGLIAPASPGSIFAILAMTAPGAHFAVVASVILSCAVTFAIASILLK
                     TQKGEASLEDAQAQTQAMKAESKGVVNGNINKIYVACDAGMGSSAMGASMLRKKVQAA
                     GLNIEVQNLAINDLPQDAQLVITHKDLTARATQRVATAQHLSLTNFLDSAFYDSLVAK
                     LANHQPQQAVQNTQNFANPVEEPQAEGLKLQAAQVFLGLQANSKEEAIRFAGEQLVKA
                     GFVQPSYVDAMFAREQMVSTYLGEGLAVPHGTSDAKDSVLKTGIVVCQYPNGVRFTDE
                     EDGVAKLVVGIAAKGNDHIQILSAITNALDDEQAMKTLTSTNDVEKVLALLSK"
BASE COUNT         3156 a         2036 c         2379 g         3101 t
ORIGIN      
        1 catttcaatg aataaactta ttgcctcttt ggtggcttca agctgtgcga cggcttttgc
       61 tgctcctgtt caacagaaca atttccacac cactacccac acttacgaat ttacgcaatc
      121 ttatgattta gttgtgccac aaggctcgaa aggaacaact aatttgtgga ttccgttgcc
      181 gtctgatacc gattatcaaa cggtaaaatc gatagagttt gagggaagtt acaaaaacgc
      241 ctatatcaca gaaaataacg cttatggtgc aaaaaccttg tttgccactt gggatactga
      301 tgcaccaaag cgtgatctaa aagtgaaaat ggtgatccaa acccaagatc gtgagcctat
      361 ggctcaaggg gcgttggcaa attaccaaat gccggagaaa atcacttatt ctgttgatgt
      421 attggagtat ttaaaaccaa cggctcacat taaaacagac ggtattgtga aagaatatgc
      481 cgataaaatt gtgggtaacg agcaaaatcc gttgaaaaaa gcggaactta tccacaagtg
      541 gattgttgat aatatggaac gtgataactc ggtgctaggc tgtggcgatg gcgatgtgga
      601 gaaaattctc accaccaaag tgctaaaagg taaatgtacc gacatcaact cggtgtttgt
      661 agcacttgct cgtgcctcta acattcctgc tcgtgaagtg tttggtattc gtttagggca
      721 agcggtaaaa atggggcaat attccaaaac cgcatttggt agctcaaaag atggcgtggc
      781 gaatgaaagc ggcgggcagc actgccgtgc agagttctat ttagcaggct tcggctgggt
      841 gcctgtagat tctgccgatg tcgctaaaat gcgtttagcc gagaaaaaag acgtggatga
      901 tgctgatgtt caagcggtct cgaaatactt attcggcaac tgggaaatga actgggtagg
      961 cttcaatcac ggacgtgatt tcgatttata tccacaaccg gaacttacac cactgaataa
     1021 ctttggctac ccttatgctg aggtaggtgg tgacccgtta aactcgtttg aggcgaaaga
     1081 atttggctat gaattcatct ctaaagagtt ataaccataa atttatcaca atgtgcgtga
     1141 ccgccatagt gtcggcggtg acctccacat tctgttgtat tgggccactg gtttatttag
     1201 tgtttggcat ctcttcccct tggttgatgg agctaaacca actggagttt ctacaactgc
     1261 cgatgttgct gatttcgctc gctgcgtttg gctatggctt ctggttgctg aatttttcca
     1321 acaaaatcat ctgcaccaaa tacttctccc gcagaaccct ggtcattttg tattgggtag
     1381 tttctgtggt ggtgatgttc tttttaactt acccttatgt attgccttac attttggaaa
     1441 tgtggagcgg agaataaaat gaaaaaatat atcgcaacga tgctgttggc ttttggtttg
     1501 gttcattcaa gctacgcaca agaaaaaaca gctcaaattg aaacgaaaca agcagagaaa
     1561 accgtcgtcc tccatattcc ggaaatgtac tgccagctct gcgtttattt agtcaataaa
     1621 gaactacgag cagtagaagg tgtgatttcc accaaagcct caatgaaaga gcgaaaagcg
     1681 actgtggtgg taaaagaaag tgtggataac caagccctga tacaagcggt cggaaacctc
     1741 aaatatactg caaaagtcat tgaataaaac caaagctcaa acattattgt ttgagctttt
     1801 ttaatttagc cttccttttt tcccccatct aatattcaaa cttcactttt gttttgattt
     1861 aaaatgaaaa aataatttat tttgaaagtt gtttctcatt ttgtgatcgc tgtcacagtt
     1921 tttaaaataa aaataattta ctatttgcac atctcataac agagatgaaa gaaaaatatt
     1981 ttattttgaa aaacggagat cggtatgatt gaagcaatta cacacggagc agaatggttt
     2041 atcggcctgt tccaaaaagg cggtgaaacc ttagtcggta tgataaacgg tattttgcca
     2101 ctcttaattt cattattggt tgtaatgaat gccctgatta aatttgtagg gcaagatcgg
     2161 attgaacgac ttgctcaacg tagtgccgga aaccctattt cacgttattt gatcttaccg
     2221 gtgatcggca ctttcgtttt ctgtaacccg atgacattaa gcttagggcg tttcttaccg
     2281 gagcgttaca aaccaagcta ctacgccgca gcctcttata gttgccactc tatgaacggc
     2341 ttattccctc acatcaaccc gggtgaatta ttcgtttatt taggtattgc cagcggttta
     2401 accaccttag gcttaccact tgggccttta gccatcagtt atttattagt cggtatgttt
     2461 accaatttct tccgtggctg gataacagac ttcaccaccg cattctttga aaaacgaatg
     2521 gggatcacct tagatagaga agtacattta tcccactaac caagtaactg aaatacagag
     2581 gaatagatta tgagcaacaa agcgatttac attgaaaaag gcaacggtgg ttggggtggt
     2641 ccattaacat tacctgttgt ggaaggcaaa aaagtgcttt atatgaccgg cggcactcgc
     2701 cctgcgattg ttaataaatt ggtggaatta accggctggg aagcggttga tggttttaaa
     2761 gaaggcgaac cgccggcaga agaaatcggg attgcgatta ttgattgcgg tggggtatta
     2821 cgctgtgggc tttacccaaa acgccgtatt ccaaccatta acattcactc caccggtaaa
     2881 tccggccctt tagcagaatt tattgtggaa gatatttatg tttcagcggt gaaagaaaac
     2941 aatattcgct taattgatgc cgatggaagt gtgcctgtgg caacagagca agcaaaacca
     3001 acttcatcaa cgacagcaac ggcaaaagag tatgactcca gcaaaaaaat caccgaacaa
     3061 agtgatggtt tattagcaaa aatcggtatg ggaatgggat cggtggcggc gttattcttc
     3121 caagccggac gagacactat tgatacggtg cttaaaacca ttttaccgtt tatggcattt
     3181 gtttctgcgt taatcgggat catcattgcg tcaggtttag gtgatgtgat tgcccacggc
     3241 ttgacccctc tggcaaacag cccaatcggt ttagttacac tggcgttgat ttgttccttc
     3301 cctctccttt ccccattctt agggccggga gccgtgattg cacaagttat cggcgtgtta
     3361 gtcggtacgc aaatcggttt aggcaatatt ccgccacatt tagcactgcc ggcactcttt
     3421 gctattaatg ctcaagccgc ttgtgatttt attcctgtgg gtctttcaat ggcggaagca
     3481 aaacaagata ccgtacgggt gggtgtaccg tcagtattag tcagccgttt tttaaccggt
     3541 gcaccgaccg tgctgattgc gtgggcagtt tccgcattca tctaccaata attaaccacg
     3601 atacaagcgg tggaatttga aaaatttttt gcaaaatgca ccgcttgtca aaacgagaga
     3661 acatttatat gacgattatt tatcaaacga cctttaccaa aatcgggaat tttgctcagg
     3721 aatcattaac agacgatatg ttaatcactt ttaaacaagg cgcaccggca gatttacaag
     3781 attactgctt cattcataat ccatctgaat taagtagccc tttagaagta ggcgatatcg
     3841 ctgaatttga tggcgtagct tatccgatta cggcagttgg tagcgttgca tctgaaaact
     3901 tatccgccct cggacacatt accttccgtt ttgacggggc aaatgatgcg gaatttccgg
     3961 gaagcgttca cgttatcgga acaccgccgc aaggcttaac agagaactca accttgatta
     4021 tcaagcgtga ttaatgacgg attaaaaata atttcaaatt gaaaatttag aggaatacat
     4081 tatgaacaat gaaaaaaaag ttgctatcgt tgttggcggc ggtcaaacac ttggagcttt
     4141 tttatctgaa ggcttggcag atgccggtta tcgtgtggtg gttgctgact taaacggcga
     4201 aaatgcacaa aaagtggcag ccgacattaa tgccaaacaa ggcgaaggaa atgcgattgg
     4261 ggtgcaagtc gatgcggctg atgaaccaag cgttgaagca ctagctaaag caacagatac
     4321 cgtattcggg cgtgccgatg tattggttta cagtgcaggc acagcgaaag catcgcctat
     4381 ttgggatttc aacttaaacg attttgattt gtcggtaaaa gtgaatttaa ccggttattt
     4441 cttaaccgca aaacacttct cccgcttaat gattcgtgac ggtattaaag ggcgtatcat
     4501 tcaaattaat tctaaatcgg gtaaagtagg gagtaagtat aattccggtt atagtgcagc
     4561 gaaatttggt ggtgttggtt taacacaatc gttagcatta gacttggcag ataaaggcat
     4621 taccgtgcat tcattaatgt taggcaattt attgaaatcg ccgatgttcc aatcgttaat
     4681 tccgcaatat gcggcaaaac tcggcattcc ggaaagcgaa gtagagcaag tttatattga
     4741 taaagtgcct ttaaaacgtg gctgtgatta tcaagatgtg ttgaatgtct taaaattcta
     4801 tgccggcgaa gaggcagctt attgcacagg acagtctatt aatattaccg gtggtcaggt
     4861 aatgttctaa gcaaacaagc ggtcaaattt gtcgattttt ttacaacaat ttgcaaaaaa
     4921 tgactaaaat aaaccgcttg ttaattcgcc acaccggtta atatgccaca ggggaaagcg
     4981 tattgttttg aaatcgcagg tacgtttagg ctctgtggct ttttattaag gagcaatgat
     5041 ggattcaatt acacttctga ttatattggc aatgataatg tggctgttac aagccgtttt
     5101 gggttggctt caaattaaag cctttaacca agcctttatg gaaatcagta agaaaggcaa
     5161 agtaacggtt gggcgtaata gtggtcgttt taatcctaaa tcggttattg tgttggcgtt
     5221 tgatgatgag aaaaaagtgg tagatagcct ttgtatgaaa ggattttccg tctttgccag
     5281 accgcagaaa ttagcgtctg tgattggttt gtctcttgat caaattgtgc cggaaaaaat
     5341 ctttccaagc gataaacgtt cacaatttgc cttaaaagtg gcgatatctt ccggatatag
     5401 ttgctcagat caaaaataat gcgatttttt atttcatttt gaatattttt ttagttaaaa
     5461 atgagataat ggagaataaa tatgcagatc aatagtgtca tctttgatat ggacggggta
     5521 atgattgatt cagaacccca atgggcagag gctcaaattg cagtattagc cgacttaggt
     5581 attaatatca ccgagcaaga ttgcgaacaa ctcaccagag gtaagcggat tgatgagttg
     5641 agcgacactt ggattaaaaa atttcagtta tctgtttcca accaagcatt aagtgaagcc
     5701 attttggcac acggttgtgc tgcgattgaa caacacggca aagcattaac gggtttatat
     5761 gaattattgg atttcttaaa atctaatcag atcaagttag ccgttgcaac ctcatcgccg
     5821 ccggtggtga ttaaagcggt gtttgatcgc ttaaaactgt gggattattt cccgattcga
     5881 tgcagtgcaa tggacgaaga atatggcaag ccacaccctg cggtctattt gagtgcagtg
     5941 aaaaaattag gcattgaaaa acaagagtgt attgttattg aggacagtgt aaccggctta
     6001 attgccgcca aagccgctaa tttaactaca tttttggtga ataccgatta tcaaaatgaa
     6061 aaattttcaa ttgccgataa aagaatggca tcgctactag atgtcattga aaaattaaaa
     6121 cagcattagc acagattagc tcgctccaat ctttgctaaa ttggaggaac aatgaaacct
     6181 tttgaaagaa gacagcaaat tttagcctat ttagctcagc acggtagaac cgaagtggac
     6241 gtgctggcag actattttaa gctaactggt gcaaccattc gtaaagattt aacttcactt
     6301 gaagaagata agaaagtctt gcgtacttat ggcagtgtag tcttaattga tgaagaaatt
     6361 cttgaacggg aagagaaaat caataaagag gacaaagacg ataaaccgct tgcacagaaa
     6421 accggcatta atcttcaaca aaagcaagct atcgggcaaa aagctgcaga gttaattaat
     6481 gagggaaact ctattatttt tgatgcaggc agcacagtgt tacaaatgat tccccattta
     6541 aaagcatttg ataacctctc tttaatgaca aatagtttaa ctattttcaa tgagattttg
     6601 aaactcaata aatcctataa cttactgatt tccggtggta catttcgtga gaaatcagct
     6661 tcatttcacg gttattttgc tgaatccgct tttattggtt caaattttga catactcttt
     6721 attggcacag acggactaga tttagacgtt ggattaacga ctttcaatga agtatataaa
     6781 gtcagttcgc taatgtgtga tgcggcaaat aaaatcgtct tacttgccga ctccagtaag
     6841 tttggacgta aaagtccgaa tattgtgtgt gggttagaaa aaattcatac tatcattacc
     6901 gatgaaggat tatctcaaga aatgagagaa cagattaaag cgaaagggat tgagctgtta
     6961 gttgtataag ggcgtaaaaa tgaatcattt agacagtgca aaagaaacgt taaacctcta
     7021 tgctcagcag attatcacgc taaaccatcg actttctgaa gaatttaatg aggtggtaaa
     7081 tatgatactc gcttgtcaag ggcgagtggt tgttggcggt attggaaaat cggggctggt
     7141 tggcaaaaaa atggtggcaa cttttgcctc caccggtaca ccgagctttt tcttgcaccc
     7201 gacagaggct tttcacggcg atttgggaat gctgaaaccg attgatatgg taattctgat
     7261 ttctaacagt ggtgaaactg atgatgtgaa taaactgatt ccaagcctga aaaatttcgg
     7321 caataaaatt attgcgatga caggtaatcc ttactccaca cttgggcgaa atgccgatgt
     7381 gattttaaat attggtgtag agcgtgaagc ctgcctgaat aatctagctc caaccagctc
     7441 tactttggta acgatggctt taggcgatgc gttagccatt gcgctaatga aagcccgtga
     7501 tttccgccct gaagattttg cccgctacca cccgggtggc agtcttggtc gtaaattatt
     7561 gaacagagtg cgagatgtga tggtgcgtaa agtgccaacc gccagcttag acaccacctt
     7621 taccgaatgt ttatctgtga tgaacgaagg gcgtatgggg gtggcggtaa ttatgcaaga
     7681 cgataaattg gaaggcatta ttaccgatgg tgatatccgc cgcacattag cgaaattcgg
     7741 ggcggagagc ctaaataaaa ccgctgacga aattatgacc cgtaatccaa aaaccattaa
     7801 cgataccgaa tttttagcca aagccgaaga tttaatgaaa gagctgaaaa ttcactcatt
     7861 aattgcagtg aatgatgagg gtaaagtaac gggattgatg gagttctcta gttaatttat
     7921 agatgtaacg atggcgcaag cgtttacgct tgtgccgttc actgacatat atcaatatct
     7981 aataaaacag gtaagttgtt agcataattt cttgcactgc tatatttcca ttcaaatgcc
     8041 tcgcatacaa aaccgcttac gatagggttg ttgtgaatat ggtttagctt ttcatcaaaa
     8101 aatttctgag aatagattgt tatcggttgg ttatgatgtt gccaaagttg gtattgcttg
     8161 acattatttc gttgtttagc tgcccgagta aacatccata ataaccattc ttttctactt
     8221 tcttggggat ttgttttaat ttgctgaatc aacatttaga tgtaaatgtt ttaaaatctc
     8281 ttattaaatc tgacgggttt tggtcttttg cttgaaataa taaatgaata tggcttggca
     8341 taatgcagta gccatataaa atcatccctt tttgttttcg acaataattc aatgattgga
     8401 taatggtttg aaaataatct tctcgaataa atagatcaat ccaataaact gttgcaaaac
     8461 taacaaaata ggctccgctc ttctcataaa acttatattt tctactcatt atgaacctct
     8521 aaagtgcagt ttatgctgat agtaatatag gtgaacagtt agggttagca attcatttta
     8581 ttttttcgat gtagatcgca aaaatagaat tatgcttggc acaagcgagg acgcttacgc
     8641 catctttact ccaaaaatgt gagatagatc acattttcaa atctgcccaa aaaaatttaa
     8701 tgtgatctac ttcacatttc tgagagaaac atttttgtaa cttttgaaag tggtgctaat
     8761 ttaagcacga ttttttcaac cctaattttc tctccttttt tgaggtttct atgtctaatt
     8821 taaaagtgaa agtccaaggt tttgggcgtt tcttatcgaa tatggtgatg ccgaatatcg
     8881 gtgcctttat tgcgtggggc tttatcaccg ccctgtttat tccaaccggt tggttgccga
     8941 acgagacttt tgctaaactg gtcggtccga tgattactta cttgctgcca ctgttaatcg
     9001 gttacagcgg tggtaaatta gtcggtggtg agcgtggtgc ggttgtaggt gcgattacta
     9061 caatgggtat tatcgtgggt tctgaaatcc cgatgttctt aggtgcgatg attgtaggtc
     9121 cattaggcgg ctgggcgatc aaaaccttcg ataaagcgat tgacggcaaa gtaaaaagcg
     9181 gttttgagat gttggtaaac aacttctcgg tcgggatcat cggtatgatt ttggcaatgc
     9241 tttcatttgc tttcattgga ggtatcgtca cccaaatctc tgcggcatta ggtgcaggtg
     9301 tgggggcgtt ggttgaagct ggtcttctgc cagtaacctc tatcatcgtt gaaccggcga
     9361 aaatcctatt cttaaacaat gcgatcaatc acggtgtgtt cacgccattg ggtacagcac
     9421 aagcacaaga agtgggcaaa tctattctgt tcttgattga agcgaacccg ggtccgggct
     9481 ttggtatctt gcttgcctat atgttctttg gtcgtggcac agcaaaacaa accgctggta
     9541 gtgcgtcaat cattcacttc ttaggcggta ttcacgaaat ttatttcccg tatgtgttaa
     9601 tgagcccacg cttaattctt gcagtgattg caggcggtgc aaccggcgtt ttaaccaact
     9661 cattattagg tggcggttta atcgcaccgg cttccccggg ttctattttt gcgattttag
     9721 caatgaccgc accgggtgct cactttgcag ttgttgcctc cgtgattctt tcttgtgccg
     9781 tgacttttgc gattgcgtca atcttactca aaacccaaaa aggtgaagcc tcattggaag
     9841 atgcacaagc acaaactcaa gcgatgaaag cagaaagcaa aggcgtagta aatggtaaca
     9901 tcaacaaaat ctatgtagcg tgtgatgccg gtatgggttc aagtgcgatg ggtgcgagta
     9961 tgttacgcaa aaaagtgcaa gcggcaggtt taaacattga agtacaaaac ttagcgatca
    10021 acgacttacc gcaagacgca caactggtga ttacccacaa agacttaacc gctcgtgcaa
    10081 cacaacgtgt ggcaacggct caacacttat cgctcactaa cttcttagac agtgcgttct
    10141 atgacagctt agtggcaaaa ctggctaacc accagccaca acaagcggtg caaaatacac
    10201 aaaattttgc aaacccggtg gaagaacctc aagccgaagg gttaaaattg caagcagccc
    10261 aagtcttttt aggcttacaa gctaacagta aagaagaagc gatccgcttt gccggtgagc
    10321 agttagttaa agcgggcttt gttcaaccaa gctatgtaga tgcaatgttc gcccgtgagc
    10381 aaatggtttc aacttactta ggcgaaggct tagctgtgcc acacggtaca tctgatgcca
    10441 aagacagcgt actgaaaacc ggtatcgtgg tctgccaata cccgaacggc gttcgcttca
    10501 ccgatgaaga agacggcgtg gcgaaactgg tggtcggtat tgcagcaaaa ggcaacgacc
    10561 atatccaaat tttaagtgca attaccaacg cactggacga tgaacaagca atgaaaacac
    10621 tgacctcaac aaatgacgtg gaaaaagtgt tagcattatt atctaaataa tc
//
LOCUS       DANLXO010000095        10502 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.095, whole genome shotgun sequence.
ACCESSION   DANLXO010000095 DANLXO010000000
VERSION     DANLXO010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10502
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.095"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..233
                     /locus_tag="PXD69_002109"
     CDS             <1..233
                     /locus_tag="PXD69_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL6284265.1"
                     /translation="SIILEIINALGNKENIKQVEACLTRLRVVLHNNGLLNKSALKKL
                     GAVDVIKVGDTQQIIFGAKAGQYRDEINALIG"
     gene            complement(277..1101)
                     /locus_tag="PXD69_002110"
     CDS             complement(277..1101)
                     /locus_tag="PXD69_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL6284266.1"
                     /translation="MNGPTQLAHFQEQIRKEYDGLSKRLKQVAQYVLDNGNSVVFDTV
                     STIAERADVPPSTLIRFANAFGFSGFNEIKQLYRQDMMEGTSRYTERVQLFRQIEPLD
                     EQNSELNHILDVFVQGNTQALQQLSTQVSEEQLAQTVDILHNAKRIFIVGLKRSFSIA
                     NYLNYALHHLDYDVFMIDGSGGMFDEQLSRIREGDAVIAVSFSPYANETLNVVTATAR
                     PGVKHIAITDSQLSPLLSFSDVSFIIKEAQVSGFRSQCATMTLAQTIAVSLALKKA"
     gene            complement(1239..2579)
                     /locus_tag="PXD69_002111"
     CDS             complement(1239..2579)
                     /locus_tag="PXD69_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL6284267.1"
                     /translation="MSVSQRFIDFMNAHVAPVARRMENQPHISAIRDGFIVVLPFLIV
                     GSFIMILLIPPFDENTQNAFGQAWWRFANWASPYGWNFFQMSFNAISLFTSASIAYNL
                     AKAYKREPLPAAFLSVMAFLLVAAPVKDGMMDIKFFGGIGLFSAIFIAIYSVEMTRLL
                     EFLKIKIRLPKEVPHAVAESLNIVIPILAILLTLYPFAIWVESATGRNIPQLIMDFMA
                     PLIAVSDSLGAICLFVIATHLLWFLGINGSLVLMQLWTPFLLQNMAANLAAFQAGEPL
                     PFIITNSFWDFYIVHGASGGVIALAFLLVRSKSAHLRSIGKIGLVPSFFSIGEPIVYG
                     VPMVVNPLFFIPLIFAPLANAVIAYLILDFNLIHRVYLMAPWTTPAPIGAYLVSAGDI
                     WAPILSIALIILDIVIYYPFFKMYEKVCVEKEKAQNLDEKAQQELLEKARMAAQ"
     gene            complement(2582..3922)
                     /locus_tag="PXD69_002112"
     CDS             complement(2582..3922)
                     /locus_tag="PXD69_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HDL6284268.1"
                     /translation="MSCNTSPKRFHASWESIKQHQVPEWYEDAKFGIFIHWGIYSVPA
                     FAPPTCQLGEIDIDEQWFCNNPYAEWYFNSINVKKGPTYEHHIKTYGESFAYNDFLPL
                     WKAEKWQPAEWAKLFAKAGAKYVVLTTKHHDGFCLYPSKYTDFNCMQAGPKRDLMGEL
                     TENVREQGLKMGAYYSGIIDWTYSSAPIFTESQNFSNACPTYEYADYAYKQVVELIDR
                     YKPDVLWNDIGWPKVGEHMLPHLFAHYYNSVQEGVVDDRWNKLWCDFTSKEYKHGVAS
                     RDKKWEMCRGMGLSFGYNQVEDESHLISVKDLISLLVETVADNGNLLLNIGPKADGTI
                     PQEQVERLLALGSWLEINGEGIYKSRCSQHQTEQIGDVTYRYTKVGADLYLYIDGLTE
                     AQISLPLSVYGELQALNTELKFTIENTAQGRVLHIQNYQPDWYVLGFKIADGEK"
     gene            complement(4211..6127)
                     /gene="iolC"
                     /locus_tag="PXD69_002113"
     CDS             complement(4211..6127)
                     /gene="iolC"
                     /locus_tag="PXD69_002113"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HDL6284269.1"
                     /translation="MATVNHQDRPLDLICLGRVAVDFYGQQIGSRLEEMTTFSKYLGG
                     SSGNVAYGTAVQGLRSSMLARVGDEHMGRFLREELQSVGVDTSHLITDKERLTALVIL
                     GIKDKETFPLIFYRDNCADMAITKDDFSEAYIASSRCLAITGTHLSNPKTREAVLTAL
                     EYAGRNEVKRALDIDYRPVLWGLTSLGDGETRYIDSAEVTKSLQEVLHHFDLIVGTEE
                     EFHIAGGSTDTLTALKNVRKVSNAVLVCKRGALGCSVFEGELPNDLDGGLNVYGVRVE
                     VLNVLGAGDAFMSGLLRGYLNNEGWEQACHYANACGALVVSRHGCSPAMPTKRELDDY
                     LTRAESVPRPDLDERLNHLHRVTTRKKQWENLCIFAFDHRKQLVDMANKVGADLARIP
                     KLKQLLLKAMEQTATQSGLPQNQAGILADTTFGQDVLNEITGKDYWIARPIEEPSSRP
                     LELEYGDLGSQLASFPRDHVIKCLAFYHPNDESGLKARQDRKLKEVYQACCRTGHELL
                     LEIILPADMPQSEAFYNQAIAHFYQLGIKPEWWKLPDVSRAQWQAISATIEANDPDCR
                     GILILGLDAPLEVFKDTFEQAKGCEKVKGFAVGRTIFGEPSEKWLAGELDDNTLISAV
                     SEKYRTLIDLWQQR"
     gene            6395..8329
                     /gene="iolD"
                     /locus_tag="PXD69_002114"
     CDS             6395..8329
                     /gene="iolD"
                     /locus_tag="PXD69_002114"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HDL6284270.1"
                     /translation="MQTTRLTVAQALVQFLDNQYLDVDGKEIKFVHGVAAIFGHGNVL
                     GIGQALAQNAGGLTLYQGRNEQGMAHLAMGFAKQNLRQRIIACTSSVGPGAANMVTAA
                     ATATANRIPLLLLPGDVFATRQPDPVLQQIEQPYDLSISTNDAFRAVSKYWDRVQRPE
                     QLMSACINAFRVLTDPAETGAVTIALPQDVQAESFDFPNSFLQKRVHRLERTPPTTAM
                     IKQAVTLIQTKKKPLIVCGGGVRYSQAGQILQKFAKQFGIPFAETQAGKSAVVSDHAL
                     NVGGVGETGCLAANRLAKEADLVIGIGTRYTDFTTSSKWIFQNPNVQFLNINVARFDA
                     YKLDGVQLVADAKTALEALSQAIPTDYQAQWENEISQAKADFADEIQRLRAVQYHPDF
                     TPEINDNLDHKAVHNEFIQLTGSQLTQTQVLGIVNETIDNNAIIVAAAGSLPGDLQRT
                     WLSKGEETYHLEYGYSCMGYEVSAAVGVKIARPEQEVYALLGDGSYLMAHTELVTSIQ
                     EGKKINVVLFDNMANGCINNLQIGNGMDSFGTEFRFRNGETNQLNGGLVPIDFAKNAE
                     AYGCKTYRVTNEAELRAALDDAKKQTVSTLIDIKVLPKTMAHGYGCWWHVGVAEVSES
                     ERIQQARQRSEEQLAKARKY"
     gene            8456..9352
                     /gene="iolE"
                     /locus_tag="PXD69_002115"
     CDS             8456..9352
                     /gene="iolE"
                     /locus_tag="PXD69_002115"
                     /EC_number="4.2.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011817366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myo-inosose-2 dehydratase"
                     /protein_id="HDL6284271.1"
                     /translation="MKAENIQLGIAPIGWTNDDLPELGAENTFEQCVSEMALAGYTGC
                     EVGNKYPRDVAVLKHKLDVRGIQICNAWFSTFFVDGKREETIAEFIKHRDFLHAMGAK
                     VIGCSEQSRSIQGTTKSVFKEKPIFNDEDWKRMAEGYNELAKLAAEKGMKVCLHHHMG
                     TGIQTPEEVDRYMAEVNDDVYLLFDSGHLYYSEGCQKAMLGVLEKYIDRIIHVHLKDV
                     RDEVMAEVKAKDLSFLEGVKKGTFTVPGDGVIDFRPIFDILEKHDYKGWMVVEAEQDP
                     ALANPFEYALKGRKYIRETAGV"
     gene            9354..10364
                     /gene="iolG"
                     /locus_tag="PXD69_002116"
     CDS             9354..10364
                     /gene="iolG"
                     /locus_tag="PXD69_002116"
                     /EC_number="1.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol 2-dehydrogenase"
                     /protein_id="HDL6284272.1"
                     /translation="MLKVGIIGAGRIGRVHSESISKYVKGAEIKAISDVKITEELTAW
                     AKSMGIPEVYDDYKKILQDPEIDAVLVCSSTNTHAPISIEAAQAGKHVFCEKPVDADP
                     AKIREVLSAVEKAGVKFQVGFNRRFDHNFKAIKDRVAAGDIGEPHVIRVTSRDPEAPP
                     IEYVKVSGGMFFDMTIHDFDMIRYLSGSEVEEVFAVGTVLVNPEIGKAGDIDTAVITL
                     KLKNGAIGVIDNSRKAAYGYDQRAEVFGSKGAIHITNDTGSTAVFSGENGVVAEKPKY
                     FFLERYMQSFADEISCFVDSVVNDKPTLVNGNDGLQPVLIALAAKKSLEENRPVKLSE
                     VA"
BASE COUNT         2998 a         2321 c         2354 g         2829 t
ORIGIN      
        1 aatctatcat tctagaaatt attaatgctt taggaaacaa agagaatatc aagcaagttg
       61 aagcttgttt aacccgttta cgtgtggtgt tacataacaa cggtttatta aataagtcgg
      121 cactgaaaaa gcttggggcg gttgatgtca ttaaagtcgg tgatacgcaa caaattattt
      181 ttggtgcaaa agccgggcag tatcgtgatg aaattaacgc tttaatcggt taatagacaa
      241 agacctgtat ttacgcaggt ctttcacttt cttaatctag gcttttttca acgccagtga
      301 aacggcaatc gtttgtgcga gcgtcattgt ggcacactgg gatcgaaaac cactcacctg
      361 tgcttcttta ataataaacg acacatcgct aaatgaaagg agtgggctaa gttggctatc
      421 agtgatcgca atatgtttta cccccggtct ggcagttgct gtcaccacgt tgagtgtttc
      481 attcgcatac ggggaaaagc tcacggcaat caccgcatca ccttcacgga ttcggcttaa
      541 ttgctcgtca aacataccgc ccgaaccatc gatcataaag acatcatagt ccaaatggtg
      601 caacgcatag tttaggtagt tcgcaatgct gaatgagcgt tttaaaccca caataaaaat
      661 gcgtttggca ttgtgtaaaa tatctaccgt ttgtgctaac tgctcttcgc tgacttgtgt
      721 cgataactgt tgcagtgcct gcgtattacc ctgtacgaac acatctaaaa tatgattgag
      781 ctcactgttt tgctcatcaa gcggttcaat ttgacgaaaa agttgcacac gttcggtgta
      841 acgtgatgtg ccttccatca tatcttggcg ataaagctgt ttaatttcat taaaaccgct
      901 aaatccaaac gcattcgcaa aacggattaa ggttgaaggg ggaacatcag ctcgttcagc
      961 aatggtagaa accgtatcaa acaccacgct gttgccatta tccagcacat actgtgccac
     1021 ttgttttaaa cgtttactta gtccgtcata ctcttttcgg atttgttctt gaaaatgtgc
     1081 taattgagta ggtccattca tttcaaatta tctctgcttg aattttttat ttcattatac
     1141 gcttttcttg tttacaagcg gataaatttt gtcaattttt tgcaaaaata agggctaatc
     1201 tttcgattag cccctctcaa ttacgctaga aataagtgtt attgtgctgc cattcgtgct
     1261 ttttctagca actcctgttg tgctttttca tctagatttt gtgctttttc tttctcgacg
     1321 cagacttttt catacatttt gaagaatgga tagtagatca caatatccaa aataatcagt
     1381 gcaatactta aaattggtgc ccaaatatca ccggcagaaa ccagatatgc cccaatcggt
     1441 gccggtgttg tccacggtgc catcaagtaa acacggtgaa taaggttaaa atctaaaatc
     1501 aggtaggcaa taaccgcatt cgctagtggt gcgaaaatca gcgggataaa gaacagcgga
     1561 ttaaccacca ttggcacacc atacacaatt ggttcaccga tagagaagaa ggacggaacc
     1621 aagccgattt taccgataga gcgtaagtgt gccgatttac tgcgtaccag caggaatgcc
     1681 aaggctatta caccaccact tgccccgtgt acgatataga aatcccagaa ggaattggtg
     1741 atgataaagg ggagcggttc accagcttgg aatgctgcta agtttgccgc catattttgc
     1801 agtaggaatg gtgtccaaag ttgcattagt accaatgagc cgttaatgcc taagaaccag
     1861 agcaaatggg tagcaataac gaacaagcaa attgccccta gcgagtcact cacagcaatc
     1921 aatggcgcca taaagtccat aattagttgt ggaatattac gacctgtggc actttccacc
     1981 caaatggcaa acggatagag agtcagtaaa atcgctaaaa ttggaatcac gatattcaga
     2041 gattctgcta cagcgtgcgg cacttctttc ggtaagcgga ttttaatttt taagaactcc
     2101 aacaagcggg tcatttctac cgaataaatg gcaataaaaa tcgcagagaa tagcccaata
     2161 ccgccaaaga atttaatatc catcattccg tctttgaccg gtgcagccac taacaaaaat
     2221 gccattaccg agagaaatgc cgctggcagg ggctctcttt tataggcttt ggcaaggttg
     2281 taggcgatac tggcagaggt aaataatgaa atcgcattaa acgacatttg gaagaaattc
     2341 caaccgtaag ggcttgccca attcgcaaaa cgccaccaag cttgcccgaa agcattttgg
     2401 gtattttcat caaatggcgg aattagcaaa atcataataa agctgccgac aattaagaat
     2461 ggtaacacta caataaaacc gtctcgaata gcggaaatat gcggttgatt ttccattcga
     2521 cgtgctactg gagcaacgtg ggcattcata aagtcaataa aacgttgtga aacggacata
     2581 cctatttctc cccatctgca attttaaagc ctaatacata ccaatccggc tggtagtttt
     2641 gaatatgtaa cactctgcct tgtgcggtgt tttcaatggt aaatttcagc tcggtattga
     2701 gtgcttgtag ctcaccataa actgacagtg gcaagctgat ttgggcttcg gttaagccat
     2761 caatgtaaag atagagatcc gccccaactt tggtataacg ataggttaca tcaccgattt
     2821 gctcggtttg gtgttggcta caacgggatt tatagattcc ctctccattt atttccagcc
     2881 agctccccag tgctaataag cgttcaactt gctcttgcgg aatagtgcca tctgctttcg
     2941 ggccgatatt cagcaataaa ttgccgttgt cggctacggt ttctaccaat agggaaatca
     3001 agtctttcac cgaaatcaaa tggctttcgt cttctacctg gttatagccg aacgataagc
     3061 ccataccacg gcacatttcc catttcttat cacgggaagc cacgccgtgt ttgtattctt
     3121 tggaggtgaa atcgcaccat agtttgttcc agcggtcgtc cactacgccc tcttgaacgc
     3181 tgttgtaata atgagcaaat aggtgtggta acatatgctc gcccactttt ggccagccaa
     3241 tatcattcca caatacatct ggtttatagc ggtcgatcag ctctaccact tgtttatagg
     3301 cgtagtcagc gtattcgtaa gtcgggcaag cgtttgagaa gttttgactt tcggtgaaaa
     3361 tcggggcaga ggaataagtc caatcgataa tgcccgagta gtaagcgccc atttttaagc
     3421 cttgctcccg cacattttca gtcagctcgc ccattaaatc ccgcttcggt ccggcttgca
     3481 tacagttgaa atcggtatat ttacttggat agagacagaa accatcgtga tgtttggtgg
     3541 ttaataccac atatttggcg ccagctttgg caaacagttt cgcccattct gctggttgcc
     3601 atttttccgc tttccatagt ggcaggaagt cgttataggc aaaggattcg ccataagttt
     3661 tgatatgatg ttcgtaggtc gggccttttt tgacattgat ggaattaaaa taccattctg
     3721 cataagggtt attacagaac cactgttcat caatatcaat ttcacctaac tgacaggtcg
     3781 gtggggcaaa ggcgggtacg gagtaaatcc cccagtgaat aaaaatccca aacttagcat
     3841 cttcatacca ctctggtact tggtgctgtt tgatcgactc ccaactggcg tggaaacgtt
     3901 ttggtgaagt gttgcaactc atacacagac tcctattgaa tctaaataga actaaactga
     3961 aatacatttt ccattttgat aaaaataaaa caatttgttt cgataaaaag gggggggttt
     4021 atgtatgaaa tgtgaacttc atcacactta ttttgtgata agcagattga ggaatgcccg
     4081 atattcgctt ttttaggaaa attcgggcat ttttacggct agcaagcggt ctgtttagcc
     4141 ggattttttg caaaacaaaa ccccttgctt aatatcataa gctaaggggt tttcacttaa
     4201 agcaatatga ttaacgttgt tgccagagat cgattaaagt gcgatatttc tccgataccg
     4261 cagaaatcaa ggtattgtcg tccaattcac cggcaagcca tttttcggac ggttcaccga
     4321 aaatggtgcg gccgactgca aagcctttca ctttctcaca gccttttgcc tgttcaaagg
     4381 tgtctttaaa cacctctaac ggggcatcta aacctaaaat taaaatacca cgacagtccg
     4441 gatcgtttgc ctcaatggtg gcggaaatcg cttgccattg tgcgcgagaa acatccggca
     4501 atttccacca ttccggctta atgccaagtt ggtagaaatg tgctatcgct tggttataga
     4561 aagcctcact ctgtggcata tcagcaggca gaataatttc caacaatagc tcgtgaccgg
     4621 tacggcaaca ggcttgatac acctctttta acttgcgatc ttggcgggct tttaaaccgc
     4681 tttcatcatt cgggtggtaa aatgccaagc atttgatgac gtgatcgcgt gggaatgatg
     4741 ctagctgaga gcctaaatct ccatactcta attccagcgg gcgggaagac ggctcttcaa
     4801 tcgggcgggc aatccagtaa tctttgccgg taatctcatt aagtacatct tgcccgaaag
     4861 tggtatcggc taggatccct gcttgatttt gtggtaagcc ggattgagtt gcggtttgtt
     4921 ccatcgcttt taatagcagc tgtttcagtt tcggtatgcg agcaagatct gcaccgactt
     4981 tatttgccat atccaccaac tgtttgcggt gatcaaaagc aaaaatacag agattttccc
     5041 actgtttttt gcgggtggtg acacggtgta agtggtttaa acgctcatct aaatccggac
     5101 gtggtacact ctctgcacgg gttaaataat cgtcaagttc acgtttggtc ggcattgccg
     5161 gtgaacagcc gtgacgagat accactaacg ctccgcacgc attggcatag tggcacgctt
     5221 gttcccaacc ttcgttattt aagtagccac gcagtaagcc cgacataaaa gcatcgcctg
     5281 cacccagcac attcagcact tctacacgca cgccgtacac attcaagcca ccgtctaaat
     5341 cattcggcag ctcgccttca aatactgaac accctaatgc cccacgtttg cacactaata
     5401 cggcattaga gactttacgc acatttttga gtgcagtgag agtatcggtc gaaccgcctg
     5461 cgatatgaaa ttcttcctct gtgccgacaa tcagatcgaa atggtgcaat acttcttgta
     5521 gcgatttggt gacttcggca ctgtctatat aacgggtttc gccatcaccg agtgaggtta
     5581 atccccataa cacagggcga taatcaatat ctaacgctcg ttttacctca tttctacccg
     5641 catattcgag tgcggtcagc acagcttcac gggttttagg gtttgacagg tgcgtgccgg
     5701 taattgctaa gcaacggctg gaagcaatat aggcttcgct aaaatcgtct ttggtgattg
     5761 ccatatccgc acagttatca cgatagaaaa tcagcggaaa agtctcttta tctttaatgc
     5821 cgagaataac cagtgcagtt aagcgttctt tatcggtaat taaatggctg gtgtccacgc
     5881 ctacgctttg tagctcttca cgtagaaaac gccccatatg ttcgtcaccg acccttgcca
     5941 gcattgaaga acgtaaacct tgcaccgccg taccgtaagc cacattgcct gacgagccgc
     6001 cgaggtattt tgaaaatgtg gtcatctctt ccaaacggga accgatttgt tgcccataaa
     6061 agtccaccgc cacacgccct aaacagataa gatccaatgg acgatcttga tgattaactg
     6121 ttgccataac cgctccttac aacaagtaaa tttgaataca cactatacat catacaaaaa
     6181 tgaaattttt atttcaaatt tattctattt aaattatcat ttctgtgatc tagctctcac
     6241 tttgaaaaat aaggcaataa cttcgcagaa atgagaactg gatcacatct ttttttcgat
     6301 ttccttgcta ttataaatga aataaatttt tcatttgtaa aaatcagtag aaaaccgacc
     6361 gcttgcaaaa gcgatgtaag ccagaggagg ctttatgcag actactcgtt taacggttgc
     6421 acaggcgtta gtgcaatttt tggataatca atatttagac gtggacggca aagagattaa
     6481 attcgttcac ggtgttgccg ctattttcgg ccacggcaat gtgctgggaa taggtcaggc
     6541 gcttgctcaa aatgccggtg gtttaacgct ctaccaaggc agaaatgagc aaggtatggc
     6601 acatttggcg atgggctttg ctaagcaaaa tctgcgtcaa agaattattg cctgtacttc
     6661 ctcggtcggg ccgggggcgg caaatatggt tacggctgcg gcaacggcaa cagcgaaccg
     6721 tattcctctt cttttattac cgggcgatgt gtttgcgacc cgccagccgg atccggtact
     6781 gcaacaaatc gaacaacctt acgatttaag cattagcact aacgatgcgt tccgtgccgt
     6841 cagtaaatat tgggatagag tgcaacgccc tgagcagtta atgagtgctt gtatcaatgc
     6901 gtttcgtgtg ctgaccgacc ctgctgaaac cggtgctgtc accattgctc tgccgcaaga
     6961 tgtacaagcg gagagttttg atttcccgaa cagcttcctg caaaaacgag tgcatcgctt
     7021 agagcgtaca ccgccgacaa cagcgatgat taagcaagcg gtaacattaa ttcaaaccaa
     7081 gaaaaaaccg ctgattgtct gcggtggcgg tgttcgctac tcgcaagcgg gtcaaattct
     7141 gcaaaaattt gctaaacagt tcggcattcc atttgctgaa acccaagcgg gtaaaagtgc
     7201 ggtggtgtcc gatcacgcat tgaatgtagg cggagtggga gaaaccggtt gtttagcggc
     7261 aaaccgtctg gcaaaagaag cggatttagt gattggcatt ggtacacgct acaccgactt
     7321 cacgacttct tccaaatgga ttttccaaaa cccaaacgtg cagtttttga acattaatgt
     7381 ggcacgtttt gatgcgtaca aattagacgg cgtgcaactg gttgccgatg caaaaactgc
     7441 attagaggcg ttaagccaag ccattcctac tgattatcaa gctcaatggg agaatgaaat
     7501 ttcacaggcg aaagcggatt ttgctgatga aattcaacgc ctgcgcgctg tgcaatatca
     7561 ccctgatttc acccctgaaa ttaacgataa tcttgatcat aaagcggttc acaatgaatt
     7621 tattcagctc accggttccc agctcaccca aacccaagtg ctgggtattg tgaatgaaac
     7681 cattgataac aatgcgatta ttgttgccgc cgccggaagt ttgccgggtg atttacaacg
     7741 cacttggtta agtaaaggtg aagagactta ccaccttgaa tatggctact cctgtatggg
     7801 ctatgaagtg agtgcggcag tcggcgtgaa aattgcccgc cccgaacaag aggtctatgc
     7861 cttgctgggg gacggctctt acttaatggc acacaccgaa ttagtgacct caattcaaga
     7921 gggcaaaaaa atcaacgtgg tgctgttcga caatatggca aacggctgta tcaacaacct
     7981 gcaaatcggc aacggtatgg acagtttcgg tacggaattc cgcttccgca atggcgaaac
     8041 taaccaactc aacggcggtt tagtgccgat tgattttgcc aaaaacgccg aagcatacgg
     8101 ctgcaaaacc tatcgggtaa ctaacgaagc cgaattgcgt gccgcccttg atgatgcgaa
     8161 aaaacagacc gtttctacct taatcgatat taaagtgttg ccgaaaacaa tggctcacgg
     8221 ctatggctgc tggtggcacg ttggtgtcgc ggaagtgtca gagagcgagc gtattcaaca
     8281 agcccgccaa cgctccgaag agcagttagc taaggctcgg aagtattagt taaaaaaaca
     8341 actccccact ttgagctacg aggggagaat atcaagcggt caaatttgca aaatttttga
     8401 taaaaataac cgcttgcatc caaatttatc tctataaatc aaacgaggtt tctctatgaa
     8461 agctgaaaac attcaattag gcattgcccc aatcggttgg acgaacgatg acctgccgga
     8521 actgggagcg gaaaacactt tcgagcagtg tgtgagtgag atggcacttg ccggctacac
     8581 gggctgtgaa gtgggtaata aatatccgcg tgatgttgcc gtgttaaaac acaaactgga
     8641 cgtgcgtggc attcaaatct gtaatgcgtg gttcagcacc ttctttgtgg acggtaaacg
     8701 ggaagagacc attgccgagt tcatcaaaca tcgtgatttc ttgcatgcaa tgggggcaaa
     8761 agtgatcggc tgttccgaac agagccgtag tattcaaggc acaaccaaat ctgtgttcaa
     8821 agaaaaaccg attttcaacg atgaagattg gaaacgtatg gcagaaggct ataacgaatt
     8881 ggcgaaactt gccgccgaaa aaggaatgaa agtctgcctg catcaccata tgggaaccgg
     8941 tattcaaaca cccgaagagg tcgatcgcta tatggcagaa gtgaatgacg atgtctatct
     9001 gttgttcgat tcagggcatt tgtactattc cgaaggctgc caaaaagcga tgctcggcgt
     9061 actggaaaaa tatatcgacc gtattatcca cgttcactta aaagatgtgc gtgatgaagt
     9121 catggcggaa gtaaaagcaa aagatttaag ctttttagaa ggcgtgaaaa aaggcacctt
     9181 tactgtaccg ggcgatggtg tcattgattt ccgtccgatt ttcgatattt tagaaaaaca
     9241 cgactacaaa ggctggatgg ttgtagaagc cgaacaagat ccggcacttg ccaacccgtt
     9301 tgaatacgcc ctcaaaggca gaaaatatat ccgtgaaacc gcaggagttt aatatgttaa
     9361 aagtaggtat tattggtgca ggccgtattg gacgtgtgca ttctgaaagt attagcaaat
     9421 atgtcaaagg tgctgaaatc aaagcaatct ctgatgtaaa aattaccgaa gaattgaccg
     9481 cttgggcaaa atcgatgggt attccggaag tttatgatga ctataaaaaa atcctgcaag
     9541 atccggaaat tgatgctgta ttggtctgct cttccaccaa cactcacgct ccgatttcga
     9601 ttgaggcagc acaggctggc aaacacgttt tctgtgaaaa accggtagat gcagacccag
     9661 ctaaaatccg tgaagtattg agtgcagtcg aaaaagccgg tgtaaaattc caagtgggct
     9721 ttaaccgccg cttcgaccac aacttcaagg cgattaaaga ccgtgtggcg gcaggcgaca
     9781 tcggcgaacc gcacgttatc cgagtaacct ctcgtgatcc ggaagccccg ccaatcgaat
     9841 atgtgaaagt ctccggcgga atgttctttg atatgaccat tcacgacttc gatatgattc
     9901 gttatttatc cggcagcgaa gtggaagaag tgtttgcagt cggcaccgta ttagtaaacc
     9961 ctgaaatcgg caaagcgggc gatattgata ctgccgttat cacgttgaaa ctgaaaaacg
    10021 gagcaatcgg cgtaatcgac aacagtcgca aagctgccta cggctacgac caacgtgcgg
    10081 aagtgttcgg ctcgaaaggg gcaatccata tcactaatga taccggctca actgccgtat
    10141 tctcaggtga aaacggcgtg gtggcggaaa aaccaaaata cttcttctta gaacgttata
    10201 tgcaatcttt cgccgatgaa atcagctgtt tcgtagattc tgtggtaaac gacaaaccaa
    10261 cgttagtaaa cggcaatgac ggcttacaac cggtacttat tgccttagct gcgaaaaaat
    10321 cactggaaga aaaccgacca gtgaaattga gtgaagtggc gtaattgatc ataaatacaa
    10381 gcggtcggtt ttactcgcta cactcgcact tcgtgccatc ggcatagccg atgttcaaac
    10441 gcaagcattt tgcagaaaaa tttgtaaaac tgaccgtttg agtttttatt tattatcttt
    10501 tg
//
LOCUS       DANLXO010000096        10014 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.096, whole genome shotgun sequence.
ACCESSION   DANLXO010000096 DANLXO010000000
VERSION     DANLXO010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10014
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.096"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..388
                     /locus_tag="PXD69_002117"
     CDS             <1..388
                     /locus_tag="PXD69_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284273.1"
                     /translation="IEQLHFALVQAELKYSGSNIPSEYSKFNLENVLIDFPNKTNSVA
                     YQNLVIHNAKTRAGKLKTQYANAHDLGNLVLVEDIQKIFSGLLEIIYQVRCHLVHGSL
                     SPTPENHEVVKYCYLILWDCLKGFCD"
     gene            complement(656..1393)
                     /locus_tag="PXD69_002118"
     CDS             complement(656..1393)
                     /locus_tag="PXD69_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6284274.1"
                     /translation="MIKIENLTLAHGIQHLSCYLPKGKLIGIMGANGAGKSSLLKAIA
                     GILRPTSGEIWLENCKLHALSAVERSRQFAYLAQQLNVAWQLSVYDVIALGLPAPLPP
                     EQERQKVRSVAEQLAISHLLDNTYQQLSGGEQTRVQLARCLMKQAPILLADEPIAALD
                     PYYQIDIMQQLKALTPTQTCVVVIHHLPLAYRFCDEIILLKNGNLLVSGNTQAVLNAE
                     NIATAFGVKAEMDWEKREMWGIEKLEV"
     gene            complement(1390..2358)
                     /locus_tag="PXD69_002119"
     CDS             complement(1390..2358)
                     /locus_tag="PXD69_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL6284275.1"
                     /translation="MKKLNIVLGSLLLLIVSNAAFYQLSDFALLKNAEGVLSDLRWLV
                     LGEIRLPRIGLAVLTGASLALAGNAMQGVFKNPLASPGLLGSSSGATAVSVFLLYYFS
                     APMGWLLFGGVAGALGAFLLVWLISFRHGTTMMILSGVAVNVLLGAAVTLLLSNAESP
                     WALAELYRWLQGSLVWATAEAVCWALPLILLGIVCLYRERRYLDLLTFGEETAATMGI
                     NLQRSFFTVSIGVALLVGATIPQTGTIGFIGLIAPHLARIWLKKPPSQLYLTSALIGA
                     LLLLIADLAVQYVPFFARIYIGTLTAILGVPFLIWILFTQQWRLAQ"
     gene            2539..2874
                     /locus_tag="PXD69_002120"
     CDS             2539..2874
                     /locus_tag="PXD69_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6284276.1"
                     /translation="MYHIERTEIFDQWLENLKDPLAVVTIARRIERAESGNFGDTKYI
                     AEGISEMRLNVSKGYRLYYAQKGSIIYILLNGGHKGTQQADIDKAKMLWAEIKQHMAE
                     QEKKNERII"
     gene            2858..3181
                     /locus_tag="PXD69_002121"
     CDS             2858..3181
                     /locus_tag="PXD69_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL6284277.1"
                     /translation="MNELYDAPIPQATREKFGIQPFDAAEYLANDELIALYLAETLKD
                     GTDEEFIQALNTVARAKGMNELAKKAGIGRESLYQSLSSSKPRFETIRKIISALNLEL
                     SVVKA"
     gene            complement(3171..5057)
                     /locus_tag="PXD69_002122"
     CDS             complement(3171..5057)
                     /locus_tag="PXD69_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL6284278.1"
                     /translation="MTQLDSVTVYSAYATPINQDKTASSVTVLTEKDFAARNATYVSD
                     VLKTVPGVAIGQQGGRGTLTSLFLRGAESRHTAVVIDGVKVNPINIGNFDFGGLPISN
                     IERIEVLRGEQSALWGSSAMGGVVYITTKSGLYKEKPFNAEVDLGLGSNNTRDASATL
                     SGFHNGFYYALHGDSHRTKGISALSKNHFSYTTETGSEVKTGGASERDGFHRDNGSLR
                     LGYDLGNKGVEVLAAQSSQTVHIDGYNSDVSGEYSRTRNQTFKLGGYWGNEQELLKHQ
                     ANISQFNSKATHFGSNARYSNEKQLNANYQLDVNFDREGEVTQAVSLLTDYAKTRYTS
                     DKYLREKTLSEKSAALEYRLFTEQDHSFSISGRYTDNSQFKNSITGRISGAYRLSPNL
                     CSDRLLLELAEPQQIRAMSPYSQKPLMMLDKLNTDKPTVEPELTALLPYADSTILLNE
                     TFYPQLTARLKQLGFKLVALNDSPQTPEQLFTLILQLGELTQNQAKAEKLVERLRLQK
                     IPLKQPLAETLILSETGMIEPHFPQYQTLLDLLGLSPLKSDLTPQNFSLEKLLLAQPK
                     QLLFLTDNQSYNNQAELLKHPALQKIWQKMSQNPPLVLPMKYTYCFDHGVWQGIQLMH
                     KLTP"
     gene            5087..5887
                     /gene="metF"
                     /locus_tag="PXD69_002123"
     CDS             5087..5887
                     /gene="metF"
                     /locus_tag="PXD69_002123"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDL6284279.1"
                     /translation="MQQKWRMLWDSIDRLSPLKPKFVSVTYGANSGERDRTHSIVKSI
                     QEKTGIISAPHLTGIDATPEELKVIAKDYWDSGIRRIVALRGDIPKGYDKALFYASDL
                     VALLKSVADFDISVAAYPEVHPEAKSAQADLLNLKRKIDAGANHVITQFFFDVESYLR
                     FRDRCVSIGIDCEIVPGILPVTNFKQLQKMAAVTNVKIPTWMGKMYEGLDDDQTTRNL
                     VAASIAMDMVKVLSREGVNDFHFYTLNRSELTYAMCHTLGVRPDLTTA"
     gene            complement(5936..7096)
                     /locus_tag="PXD69_002124"
     CDS             complement(5936..7096)
                     /locus_tag="PXD69_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284280.1"
                     /translation="MKKSILLILSLFSASLFADVQLSPLPLPQIGKVSQFDLSEQGEL
                     VVINQQKQLWRVTQQAQKLADGVSTEIEPKAQYQRIALADQNGHFMLWTADKIYTSNI
                     PLAPKATMTALNFATIAVTKQNGQFKLARIETQGNQATITATAETEVLPDAHPLQIDF
                     DAETPNQGHIAVLAKPDDFTYQHGVLGDDVEAGEIQFLERHTLNPLAEKLTQQGRVFE
                     ANRWATFTENGKTKIVSVISGDGNGASTVVIGVKDGKLSIEAESEPLSTNRWQSPFIF
                     NRKLYAIQMPHLKGNLVEYSLKGNQLAERFITSGLSNHRYGDHETNLVATTETFALIP
                     QMGYQQVVVLDKTGKITELPTALPAGIKQTKADSNKAYLLLKNGEIWVAEEK"
     gene            complement(7156..8172)
                     /gene="galE"
                     /locus_tag="PXD69_002125"
     CDS             complement(7156..8172)
                     /gene="galE"
                     /locus_tag="PXD69_002125"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDL6284281.1"
                     /translation="MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERV
                     KQITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGESVREPLRYYQNNVT
                     GSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERIL
                     EDTVKAFPQLSAVVLRYFNPVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVF
                     GGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAF
                     EAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNWQKNNPN
                     GYKG"
     gene            complement(8260..8421)
                     /locus_tag="PXD69_002126"
     CDS             complement(8260..8421)
                     /locus_tag="PXD69_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HDL6284282.1"
                     /translation="MNETLLNNLVCPVSNEKLEWDKENNRLINPKLNIAYPIKNGIPE
                     LLPEAGVAL"
     gene            complement(8399..9400)
                     /gene="lpxK"
                     /locus_tag="PXD69_002127"
     CDS             complement(8399..9400)
                     /gene="lpxK"
                     /locus_tag="PXD69_002127"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDL6284283.1"
                     /translation="MKIWQTKSLITWLLSPLSLLFWLISQARKRLYSLNILQSYRSPL
                     PMLVVGNISVGGNGKTPVVVWLVEQLQQRGVKVGVISRGYGGKAKTFPQLVTRESSAE
                     MVGDEPVLIVQRTNVPLAISPNRQQSIELLLNQFEPDIIITDDGLQHYALQRDMEWVV
                     VDGVRRFGNGFVLPAGGLRELPSRLNSVQAVICNGGTPQANEHLMTLEPSDAINLVTN
                     QRKPLSEFTQPCVAIAGIGHPPRFFTMLEKLGIPLAKTQGFADHQAFDKAQLAQFADS
                     QTPLLMTEKDAVKCHDFAQPNWWYVPVSATFSEKSTACLLAPILQKLGKEDERNTTQ"
     gene            complement(9402..9806)
                     /locus_tag="PXD69_002128"
     CDS             complement(9402..9806)
                     /locus_tag="PXD69_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6284284.1"
                     /translation="MKVHEKIKLLRENNHWTQDEMAQKLSMTTKGYAKIERGETISNL
                     PKIEQIAEVFNMDICELLSYGEEGKIYINNTDNNLTNSFISLGNGVEEIQRLQLIISH
                     KDELLAHKEEIIENQKRELALLRDLVETLKNK"
BASE COUNT         2756 a         2139 c         2194 g         2925 t
ORIGIN      
        1 tattgagcaa cttcattttg cattagttca ggcagagtta aaatattcag gtagcaatat
       61 tccaagtgaa tattctaaat ttaacttgga aaatgtgctt attgattttc ctaacaagac
      121 aaattctgta gcatatcaga atctagttat tcacaacgca aaaacgcgtg caggaaaatt
      181 aaaaacacaa tatgcaaatg ctcacgattt aggcaatttg gttttagtag aggatatcca
      241 aaaaatattt tccgggttat tagaaataat ttatcaagtt cgttgccatt tggtacatgg
      301 tagcttaagt ccaacacctg aaaaccacga agttgttaaa tattgctatt tgattttgtg
      361 ggattgttta aaaggatttt gtgattagtt attgtcaata aagctacaag cggtcaattc
      421 tcccaaaact ttgcaaattt ccccgcaaaa ctgaccgctt gttctcctct atccattcac
      481 ctcaaccaac ttttctctct acccctactc aaaatcggtt aaacaatctg ttgaggtaaa
      541 tgttgtgtcg gaatgggatt taatcttaat gaaactgaaa aaatcttctg ccaagcaaat
      601 ttccctaaaa ttggaagttc atttccaatt tctcaaaaaa tcacccaaac cggaactaca
      661 cttccaattt ttcaatcccc cacatttccc ttttctccca atccatttca gctttcaccc
      721 caaaagccgt tgcaatattt tcggcattta agaccgcttg tgtgttgccg ctgacgagta
      781 aattgccgtt tttaagcaga atgatttcat cacaaaaacg gtaggcaagg ggcaaatgat
      841 gaatcaccac cacgcaggtt tgtgttggag ttagggcttt gagctgctgc ataatatcga
      901 tttggtagta ggggtcgagg gcggcaatcg gttcatcggc aagcaagatc ggggcttgtt
      961 tcatcaaaca acgggcgagt tgcactcggg tctgttcacc gccggagagc tgttggtaag
     1021 tgttgtccag caggtgagaa atcgccaatt gttcggcaac cgaacgcacc ttttgacgct
     1081 cttgttcagg cggaagcggt gcgggcaagc cgagtgcaat cacatcatac accgaaagtt
     1141 gccacgccac gttgagctgt tgggcgaggt aggcaaattg tcggctcctc tcaacggcgg
     1201 aaagggcgtg cagtttgcaa ttttccagcc aaatttcacc gcttgtcggg cgtagaatgc
     1261 cggcaatcgc tttgagcaac gaggatttcc ctgccccgtt tgcgcccata atgccgatca
     1321 atttgccttt tggcagatag caagagaggt gttgaatacc gtgggcaagg gtgagatttt
     1381 caatcttgat cattgtgcca atctccattg ctgggtgaat aaaatccaaa tcaaaaacgg
     1441 tacgcccaaa attgccgtga gcgtgccgat gtaaattcgg gcaaaaaacg gcacatattg
     1501 caccgccaga tctgcaatca gcagtaacaa cgccccgatt aaagcggagg taagataaag
     1561 ctgggacggc ggttttttca gccaaatacg ggcaagatga ggggctatca agccgataaa
     1621 accgatggtg ccggtctgtg gaatcgttgc tccgaccaac agcgccacgc caatgctaac
     1681 ggtaaaaaaa ctgcgttgca ggttgatgcc cattgttgct gccgtctctt cgccaaaggt
     1741 gagcaggtcg agataacgcc gttcccgata gaggcagaca atgccgagca agatcaacgg
     1801 taacgcccaa catactgcct ctgcggttgc ccagactaat gagccttgca accagcggta
     1861 gagttccgcc aacgcccacg ggctttcggc attggaaagc agtaaagtca ccgctgcccc
     1921 gagcaacacg tttaccgcca cgccacttaa aatcatcatt gttgtgccgt ggcgaaagct
     1981 aatcagccac accagcaaaa atgcccccag cgcccctgcc acaccgccaa acagtagcca
     2041 gcccatcggg gctgaaaaat agtagagcag aaatacgctc accgccgttg cccccgaact
     2101 gctcccaagc aaaccggggc tggcaagcgg atttttaaac acgccctgca tcgcattgcc
     2161 ggcaagcgca aggctggcgc ccgtcagcac cgccaagcca atacggggca gtcgaatttc
     2221 acccagcacc agccagcgca gatcgcttag cacgccttcc gcatttttaa gcaaggcaaa
     2281 atcgctcagt tggtaaaagg ctgcgttgct aacaatcagc aacaacaagc ttccaagcac
     2341 aatgtttaat ttcttcattc ttctttctct catcaaacgt gcaaattata ccatagcgcc
     2401 aaagtcaagc tgaaaacgct atttttgcga tcatcatcga aaaactagcg tttgccgaat
     2461 gtaacccacg acaggctttg ctatattcct tcaatcagcc taagttttgt atttaaaaca
     2521 ttacagattg ggggtagaat gtaccatatt gaacgcactg aaattttcga ccaatggctt
     2581 gaaaatttaa aagatccact tgctgtggtg accattgcaa gacgtattga acgtgccgaa
     2641 agcggaaatt ttggcgatac caaatatatc gcagaaggaa tttccgaaat gaggctaaac
     2701 gtcagcaaag gttatcgcct ttactatgcg caaaaaggta gcattattta tatactacta
     2761 aatggcggac ataaaggcac gcaacaagct gatattgata aagctaaaat gctatgggca
     2821 gaaattaaac aacatatggc agaacaggag aaaaagaatg aacgaattat atgacgcccc
     2881 aattccacaa gctactcgtg aaaaatttgg cattcaacct ttcgatgccg ctgaatacct
     2941 cgccaatgac gagctaatcg ccctttattt ggcggaaaca ttgaaagacg gcacggacga
     3001 ggagtttatt caagcattga ataccgtggc acgagcgaaa ggaatgaatg agttagcgaa
     3061 aaaagcaggg atcgggcgtg aaagtttgta tcaaagcctt tccagcagta agccccgttt
     3121 tgagactatc cgcaaaatta ttagcgcatt aaatttggag ttgtcggtcg ttaaggcgta
     3181 agtttgtgca ttaattgtat cccctgccaa accccgtggt cgaaacagta ggtgtatttc
     3241 atcggtagga caagcggtgg attttggctc attttttgcc atattttttg taatgctggg
     3301 tgtttgagca gttcggcttg gttgttatag ctttggttat cggtgaggaa caataactgt
     3361 ttgggttgcg ctaacagcag tttttctagc gagaaattct gtggcgtgag gtcgcttttt
     3421 aatggtgaca gaccgagaag atccaacaac gtttgatatt gcggaaaatg cggttcgatc
     3481 atacccgttt cgcttagaat taaagtttca gcaagcggtt gttttagcgg aattttttgc
     3541 aaacgtagcc gttccaccag cttttccgct ttggcttgat tttgggttag ctcgcccagt
     3601 tgtaaaatca gtgtgaaaag ctgttcgggt gtttgcggac tgtcgtttaa tgcgactaac
     3661 ttaaagccaa gctgtttcag ccgtgcggtg agttgcggat agaaggtttc attcagcaaa
     3721 atggtgctgt cggcataggg caacagggcg gtgagttcag gctcaacggt gggcttgtcc
     3781 gtgttcagtt tatccaacat catcaacggc ttttgggaat agggcgacat cgcccgaatt
     3841 tgctgtggtt cggcaagttc cagcaacaga cggtcgctac acaaatttgg cgataaacgg
     3901 taagctcctg aaatacgccc agtgatagaa tttttaaact gtgaattatc ggtgtaacgg
     3961 ccactaatag aaaaactgtg atcttgttcg gtaaataagc gatattctag tgccgcactt
     4021 ttttcggata aggttttttc acgcaaatat ttatcagagg tatagcgtgt ttttgcataa
     4081 tctgtcagta aactgaccgc ttgtgtcact tctccttcac ggtcaaagtt tacatctaat
     4141 tgataattcg cattaagttg tttttcgttg ctgtagcgag catttgaacc gaaatgtgtt
     4201 gctttactat tgaattggct gatatttgct tggtgtttca gcagctcttg ttcatttccc
     4261 caataaccgc ctaatttaaa agtttgattg cgagtacggg aatattcacc gctaacgtct
     4321 gaattatagc catcaatatg aacggtttgg gaagattgag cggcaagaac ttctacccct
     4381 ttgttaccga ggtcataacc taaacgtaaa gagccgttat cacgatgaaa gccatctcgt
     4441 tcgcttgcac caccggtttt cacttctgag cctgtttctg tggtatagct gaaatggttt
     4501 ttactcagtg cggaaatgcc tttggtacga tggctatcac cgtgtaaggc atagtagaaa
     4561 ccgttgtgaa atccggaaag tgttgcgctg gcatcacggg tattatttga gcctaaacca
     4621 agatcgacct ccgcattgaa tggtttctct ttgtataaac cgcttttagt ggtgatataa
     4681 actacaccac ccatagcact gcttccccaa agggcggatt gctcgccacg caacacttcg
     4741 atacgttcga tattgctaat cggtaagcca ccaaaatcga aatttccaat attaatcgga
     4801 ttgactttta caccgtcaat cacaaccgca gtatggcgag attctgcccc tcgtaaaaat
     4861 aagctagtaa gagtaccacg cccaccttgt tgcccaatcg ccacgcccgg cacagtcttt
     4921 aacacatcac tcacataagt cgcattgcgt gcggcaaaat ctttttcggt aagaaccgtc
     4981 acgctggaag cggttttgtc ttggttgatt ggggttgcat aggcggaata gactgttacg
     5041 gaatcaagct gagtcatctc attttgtgca aaagctgtac ttgctagtgc aacagaaatg
     5101 gcgaatgctg tgggattcta ttgatcgcct aagtccttta aaaccgaaat ttgtttcggt
     5161 aacttatgga gcaaattctg gtgagcgaga tcgtacacac agtattgtga aatcaatcca
     5221 agaaaaaaca gggatcattt cagctccgca cttaacaggc attgatgcaa caccggaaga
     5281 attaaaggta attgccaaag attattggga tagtggtatt cgccgaattg ttgctttgcg
     5341 tggcgatata ccgaaaggtt atgataaagc actattttac gcctcagatt tagtcgcttt
     5401 attaaaatca gtagcagatt tcgatatttc cgtggctgcc taccctgaag ttcaccctga
     5461 agcaaaatca gcacaggcag atttacttaa cttgaaacgt aaaatcgatg cgggtgcaaa
     5521 ccacgttatt acgcaattct tttttgatgt agagagttat ttacgttttc gtgatcgctg
     5581 tgtttctatt gggattgatt gtgaaattgt gccgggtatt ctgccggtga caaatttcaa
     5641 gcagttgcaa aaaatggcag cagtgactaa tgttaagatc ccgacttgga tgggtaaaat
     5701 gtacgaaggg ttagatgatg atcaaaccac cagaaactta gttgcagcaa gtattgcaat
     5761 ggatatggtg aaagtgcttt ctcgtgaagg ggtgaatgat ttccacttct ataccttaaa
     5821 tcgtagtgaa ctcacttatg caatgtgcca tactttaggc gtaagacctg atttaacaac
     5881 tgcataatcg aacattaagg ctgtatagct aaatgagcta tacctcctta tagttttact
     5941 tctcttcagc cacccaaatc tcgccatttt ttaataataa ataggctttg ttggaatcgg
     6001 ctttggtttg tttaattcca gccggcaggg cggttggcaa ttcagtgatc ttgcctgttt
     6061 tatccaacac aacaacttgt tgatagccca tttggggtat cagtgcgaaa gtctctgttg
     6121 tcgccactaa attggtttcg tgatcaccat agcggtgatt gcttaagccg gaggtaataa
     6181 aacgttcagc taattggttt cctttcaggc tgtattcaac caaattgcct tttagatgtg
     6241 gcatttggat tgcatagagc ttgcggttaa agataaacgg cgattgccaa cggttagtcg
     6301 acagcggctc actttcggct tctattgata attttccgtc tttaacgcca atcacaacag
     6361 tgctggcccc attgccatcg ccagagataa cagaaacgat cttggttttt ccattttctg
     6421 tgaaagtcgc ccagcggttg gcttcaaata ctcgcccttg ttgggtgagt ttttctgcta
     6481 aggggtttag ggtatggcgt tctagaaatt gaatttcgcc tgcctctaca tcatcgccta
     6541 atacaccgtg ttgatatgta aaatcatcag gctttgcaag tacagcaata tgcccttggt
     6601 taggtgtttc ggcatcaaaa tcaatttgca gagggtgagc atcaggcaac acctcggttt
     6661 ctgcggtggc agtaatagtg gcttggtttc cttgcgtttc aattctggct aacttaaatt
     6721 gtccgttttg tttggtcacg gcaatggtgg caaaattaag ggcggtcatt gtagctttcg
     6781 gggcaagggg aatgttggag gtatagattt tatcagccgt ccacagcata aaatgcccgt
     6841 tttgatccgc taacgcaatt cgttggtatt gagctttagg ttcaatctcg gtggaaactc
     6901 catctgccag tttttgagct tgttgtgtga ctctccataa ttgtttttgt tggttaatta
     6961 ccactaattc gccttgttct gaaaggtcaa attggcttac tttgccaatt tggggaagtg
     7021 ggagtggaga aagctgaaca tcagcaaaca aagaagcgga gaacaagctt aagattaaca
     7081 gaatagattt tttcattagc gttacctaaa aagaagattt aaatgataaa gggagatgtt
     7141 atctcccttt acgctttagc ctttataacc attcgggtta tttttttgcc aattccaagt
     7201 gtctttcatc atttgttcta gcccacgctc ggtttcccaa cccagttgct ctaacgcttt
     7261 ttgtggagcg gagtagcaaa cggcaatatc gcccgggcgg cgatctacca ctttgtatgg
     7321 aatagtaatg ccatttgcgg cttcaaaggc ttttaccata tctagcaccg aataacctgt
     7381 tcctgtgcct aaattgtaaa cgtggaaacc ggcatcattt tggtgcttgt ctaaggcttt
     7441 taagtgacca agtgctaaat ctaccacgtg gatataatca cgcacacctg tgccatcgtg
     7501 agtattataa tcgccaccaa acaccgataa ttgaggtaat ttgcccacag ccacttggct
     7561 gataaacggc attaagttat ttgggatacc gtttggatct tcaccgatta aaccgctttc
     7621 gtgagcccct accgggttga agtaacgcaa tactaccgca cttaattgtg ggaaggcttt
     7681 aacggtatct tcaagaatgc gttcaaccat atatttggac gtaccgtaag ggttggttgt
     7741 gccaccgaca gggcaagatt ccacaatcgg gataatctgc ggatcaccat aaacggtcgc
     7801 cgatgaacta aacacaatgg tattcacatt ggcttttagc atctcttcta ccaatacaat
     7861 cgagccggtt acattgtttt gatagtaacg tagcggttct ctgacgcttt cgcctacagc
     7921 ttttaaaccg gcaaagtgaa ttaccgattc aatctgattt tccgcaaaaa ttttgcgtaa
     7981 aatatcacga tctaaaatat cgccttgata gaattttacg ctcttgccgg tgatctgctt
     8041 cacacgctca agtgatactt cagaggaatt agaaagatta tctaacacca cgatttcacg
     8101 attttcgttt aataattcaa ctaatgtatg tgaaccgatg tagcctgcac cacctgtaac
     8161 taaaattgcc attttatgtt cctctataaa attaatacga accaaggtta ttgttgctat
     8221 tttacccgat ttaatcaggc ttgctaatat ttattcagtt tataatgcca ctccggcttc
     8281 cggcagtaat tccggaatgc cgtttttaat cgggtaagca atattgagct tagggttaat
     8341 taatcggttg ttctctttgt cccattctaa tttttcatta gagacagggc agacgaggtt
     8401 attgagtagt gtttcgttca tcttcttttc ctagtttttg tagaatcggg gctaacaaac
     8461 aagcggtcga tttttctgaa aatgttgcag aaaccggtac ataccaccaa tttggctgtg
     8521 caaaatcgtg gcattttacc gcatctttct cggtcattaa taacggcgtt tggctatcag
     8581 caaattgagc cagctgagcc ttatcaaagg cttgatgatc ggcaaagcct tgagttttgg
     8641 caagcggaat gcctaatttt tctaacatcg taaaaaagcg tggtgggtga ccgataccgg
     8701 caatcgccac acagggttgg gtaaattcgc ttaatggctt gcgttgattg gtgactaaat
     8761 taattgcatc agacggttca agcgtcatta aatgctcgtt agcttgcggt gtgccgccgt
     8821 tgcaaataac cgcttgcacg gagtttaaac ggctcggtaa ttcacgcaat ccgcccgccg
     8881 gcagcacaaa accgttaccg aaacgcctta cgccatcaac caccacccat tccatatctc
     8941 gctgtagggc atagtgttgc aagccatcat cggtgatgat gatgtccggc tcaaactgat
     9001 ttaatagtaa ttcaatgctt tgttggcggt ttggagaaat agccaaaggc acattggttc
     9061 gctgaacaat cagaaccggt tcatcaccca ccatttcagc agaactttct cgggtaacta
     9121 attgcggaaa cgttttcgct ttaccgccat agcctcgaga aatcacgcct acttttacgc
     9181 cacgctgttg cagttgttcc accagccaaa cgaccactgg cgttttgccg ttgcctccaa
     9241 ccgagatatt accgactacc agcataggca aaggcgaacg gtacgattgc aaaatattca
     9301 gagaatataa ccgcttgcga gcttgactaa tcagccaaaa cagcaacgaa agcggcgaaa
     9361 gcagccaagt gataagggat tttgtttgcc agattttcat attatttatt tttaagtgtt
     9421 tcaactaaat ctcgtaataa ggctaattca cgtttttggt tttcgataat ttcttcttta
     9481 tgggctaata attcatcttt gtgggagata ataagttgta aacgttgaat ttcttctact
     9541 ccatttccta atgagataaa tgaattagtg agattattat ctgtattatt tatgtaaatt
     9601 tttccttctt ccccatagga taataattcg caaatatcca tattaaatac ttctgcgatt
     9661 tgttctattt tcggtaaatt agagatagtt tcaccacgtt ctatttttgc ataacctttg
     9721 gttgtcatac ttaatttttg agccatttca tcttgtgtcc aatgattatt ttctcgcagt
     9781 aatttgattt tttcgtgtac tttcatataa cacctataga ttgtgggagt tgggatataa
     9841 cttgatgtgg taaaggataa attttgtgga ttgtagcagt ttattgagca atttagaata
     9901 gagtaaattt tatcttaagc tcacaggaga agaaacattc atgaataatc aatataatcc
     9961 attatatgga atgctaggta ttttagcgtc agctgcatca gtaattttgc ctct
//
LOCUS       DANLXO010000097         9831 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.097, whole genome shotgun sequence.
ACCESSION   DANLXO010000097 DANLXO010000000
VERSION     DANLXO010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9831
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.097"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            137..1843
                     /locus_tag="PXD69_002129"
     CDS             137..1843
                     /locus_tag="PXD69_002129"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDL6284285.1"
                     /translation="MNTSSFNRTWAKVILSALMRYGVKHFCIAPGSRSTPLTLAAVQL
                     QQTQYAECHTHFDERGLGFYALGIAKATDSPVAIIVTSGTAVANLYPAVIEASLSHQK
                     LIILSADRPTELIGCGVNQAIHQQGIFANYPVASVNLPKANEAYHASWLVSTIEQACT
                     TQAQQGGVLHINVPFEEPLYEADINEILNTPWLRPIQGWLNNAQTKWIDQQAIQSEVS
                     MHENWDYWRTKRGVIVVGKLPPEQGTGLKTWAETMGWCLLSDVQSCIEASLPYADIWL
                     SNETVKQRLLQADIVIQFGTQIVSKRVNEFLKAFQGEYWVVEQSHDYHNPNAHHQTRF
                     IAKAHHFLRVHPPLRQKPWLLEPLALSQFCSTFIEQQVGGSLSEASLAHNIQDVLAIN
                     GNLFIGNSLFVRLVDALCKLPEGYPVYTNRGASGIDGLIATMAGIAKGSDRPTVGVVG
                     DISALHDLNSIALLTKINQPTILFVVNNSGGALFDMLPVDSKAKDQYYRLAHNFEFAQ
                     VATMFGLEYIRPFTWADLKTKLKHAYARKGVTIVEIKVNEHDGSNMYKSLLKQISQAE
                     IA"
     gene            1892..2731
                     /gene="menH"
                     /locus_tag="PXD69_002130"
     CDS             1892..2731
                     /gene="menH"
                     /locus_tag="PXD69_002130"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDL6284286.1"
                     /translation="MLSYQWHAQQGTPVVFLHGLLGSQQDWQAVLQHLQNFPQIRPLT
                     IDLPFHGNSKHITCADFANLRQQLHATLESLIGSRPFYLVGYSLGGRAALDYVLNMEN
                     PNLQGVVLEGANIGLSTENDRQIRRQNDRHWANRFRQEPIEQVLEDWYKQPVFADLSD
                     TERECYIDSRKHNQGEQIAQMLEATSLAKQPDYTEKLKQTDKNIVFFIGEKDQKFRKM
                     ASSHQLPTQLIANAGHNAHRANAKNFVEKLGLLILHSDSDLRSQSVKHNGAALLHKSP
                     SGA"
     gene            complement(2780..3457)
                     /locus_tag="PXD69_002131"
                     /pseudo
     CDS             complement(2780..3457)
                     /locus_tag="PXD69_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251475.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            3543..4205
                     /locus_tag="PXD69_002132"
     CDS             3543..4205
                     /locus_tag="PXD69_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HDL6284287.1"
                     /translation="MRKTHSFQQVRKIKPTWMSVSGHIPFRNGVSIPYESTLERDFLM
                     YFTYLPSVDEVVSQPTTLPFVKNGITYTYTPDFFLSFTDGRKPMLIEVKPKAKWQKHW
                     KEWKEKWKAAIRFCQENGYVFHVYDEDRIRHLALFNLNYVQRYKRIQHEQEDIDAILA
                     QVKLMGNTTIDYLLSRFFAGSLYRMKGLQIIYHLLATKQLHCNWFLPLNEFTEVWGNN
                     DE"
     gene            4195..6123
                     /locus_tag="PXD69_002133"
     CDS             4195..6123
                     /locus_tag="PXD69_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDL6284288.1"
                     /translation="MMSNSGFTEKRYHHRLDRGRIILQKGNIYLNREDGEQYELVDYM
                     DEPSQLLVRNLNTRTTKVVSIHQLENFKMNERTDLSVDVTAISNEYWEKAQQKYEAIK
                     PLLGMDQHRPYAVKARAEDVGVNPRTLYRWLQAYNSIGSIAGLVDQKRGWQQGNSRLT
                     PEQDKLIVQVINEFYLHKQRPTTEQTIREIRRRCKIEKVESPSKETIRMRILHISEEE
                     RLRKRGQREKARNKFKPKPNSFPDADYPLSVVQIDHTPVDLIIVDSKYRKPIGRPFLT
                     VAIDIYSRMIVGYYLSLDAPSVTSVAMCIARGILPKERLLLDLGLQGSEWNAFGYPVK
                     VHVDNGPDFQALDLSKSCSAHGIHLEFRPMGRPEYGGHIERVIGTFMKEVHSLAGTTF
                     SNIKERDSYDSEKEAIMTLDEFEKWLVHYIVNVYHKRVHSALGISPEQKWKIGIFGDE
                     NEVGCGYPQLPVDEQTLLLDFLPSITRTIQHNGVTIDGLRYYDVALNMYISDSDESGK
                     SKEFLFRRDPRNISKIWFYDPKLKRYFPIPFANQAMPEMSIWEYREVRSRIANKGDKY
                     INEQQVLDGLTEMREMVAESAQRTKKARRQAERQKMHKASKPIIETKVETKAVVPVVV
                     TSNLLALDDESLSFGEVD"
     gene            6123..7010
                     /locus_tag="PXD69_002134"
     CDS             6123..7010
                     /locus_tag="PXD69_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniB family NTP-binding protein"
                     /protein_id="HDL6284289.1"
                     /translation="MQYEHVHEKFRHLVTADNQERIAFLDEPRWLGYGVAKDIMDNLV
                     SLMNKPKRPRMLNLLIVGDSNNGKTTLIRRFFDLYGQAYIDSDSNAIYPILLAEAPPS
                     ANEKELYISLLERFYVPYKPTDTIAKLRYQTIHLFREFRVKMLVIDEFHSLLVGTPRL
                     QRQVMNAIKMLCNELQIPIVGVGTRDAIRVLHTDRQHASRFDVAELPIWKLDKEFQKL
                     LFQFQGILPLRESSNLQSPELATKIHTISGGNLGNVHRLLTACAVQAITSGTEKITLD
                     IIEKNSWVQPTNGYRKIIG"
     gene            6968..8074
                     /locus_tag="PXD69_002135"
     CDS             6968..8074
                     /locus_tag="PXD69_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HDL6284290.1"
                     /translation="MGTTNKRLSQNNRIKKGVIHTPIYSNESISSWLIRASFDCGTDP
                     LTFTGFYWEKHRLWTLDLDRGLENIEPTIYDDVQALSGKIQLSEYSLFRRLYPINADE
                     TLAKGQVRWVIPRSARNRTHHIGQQYCPLCLDESPHLRNDWRLAWNFGCLKHNMMLAN
                     RCFCCGTLYQPHLLSAEKRHLNHCHQCGGKLEQGTMEMSLAEKLTLQGINQVLEKDSG
                     ICFGYKVSGKVWFDMLRYCINLLRRASDRPNHALAKFVVNLQIDVENICSPKTGLSFE
                     QLPLGERTNLLVNAYHILGMEADSIRSAIYLCGGTQKTFMFEKYPDFWQEFMALAPAG
                     PNRTRKRTKPQNESITAINRRWERLKRKLHLNNE"
     gene            8071..9495
                     /locus_tag="PXD69_002136"
     CDS             8071..9495
                     /locus_tag="PXD69_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284291.1"
                     /translation="MKINVIKPQEEPCSACGKISRIWRRYNGEGYCANCYAKWFPKKE
                     CSCCHQPKRIYLSSTVCWDCEKQTDCVRCGKAAGTFKIGKITRYGAVCNVCSRYFREE
                     RECFECGQLSRTMLRASESGHSELLCLKCFQKYRFATCKNCRRYRKVHDRDNQLCRKC
                     SEQRTSQCPKCKQDMPAGYGNICADCSRRTLLFNLIRMNVHLFRHKKVKRAYKKFIFW
                     YLAKCGVSVVLKKSDDHVLFFMRCDENWGNIPDYRELVTFFKPNGLRTHLTVLRWLLD
                     TNQVKVDESLKEEMAGLERIQSLFNKLSNSVPCIANYYTQLQHKYEAGKTSLKSVRLA
                     LQPAIDFISSESVSLLPTQVQLNSYLVAKTGQIAAITGFINHLNREYHCELEIDRSLI
                     QKMKEKQLKQQAKQRLAILYKQEKLSIKEQNELLSVVLLNLHNIWIKSPKKLSISEID
                     GIAYYVDNEKKYFIPKDIHIRLME"
     gene            9610..9816
                     /locus_tag="PXD69_002137"
     CDS             9610..9816
                     /locus_tag="PXD69_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA delta(2)-isopentenylpyrophosphate
                     transferase"
                     /protein_id="HDL6284292.1"
                     /translation="MTLKAQFREWLKKEQEHDEMIGFAHIPCILSKVDSKLAIVSGNA
                     YEKKYLRYWIKCFRFDRNISKYIK"
BASE COUNT         3036 a         1986 c         2120 g         2689 t
ORIGIN      
        1 gttgctcaat agatagaaat tttcacgaag ttttacaaaa acattccaat tttctcctaa
       61 aaaacttccc acaataattt cactttttgc tacaatccta accatttatc gaatttatca
      121 atcagtagag aagaatatga ataccagttc ttttaatcgc acttgggcaa aagtgatttt
      181 aagtgcatta atgcgttatg gcgtaaaaca tttttgtatt gctccgggtt ctcgctcaac
      241 accgctcaca ttagcggcag tgcaacttca acaaacgcaa tatgcagagt gccacactca
      301 ttttgatgag cgtggtttag gtttttatgc gttagggatt gctaaagcaa ccgacagccc
      361 ggttgctatt attgtcactt ccggcacagc agtagcgaac ctttatcctg cggtgataga
      421 ggcaagcctg agccaccaaa aactgattat tctttctgcc gaccgcccaa ccgaattaat
      481 cggctgtggg gtaaaccaag ccattcatca gcaaggtatt tttgccaatt acccggttgc
      541 cagtgtcaat ctaccgaaag cgaacgaggc ttaccacgca agctggctgg tttcgaccat
      601 tgagcaagcc tgcactaccc aagcacaaca aggcggtgtg ttgcatatca atgtgccttt
      661 tgaagagccg ctttacgaag cagacattaa tgaaattcta aatacacctt ggttacgccc
      721 aatccaaggc tggttgaata acgctcaaac caaatggata gaccaacaag cgattcaaag
      781 cgaagtctca atgcacgaaa attgggatta ctggcgaact aaacgagggg tgattgtggt
      841 cggcaaactg ccgccggaac aaggcacagg tttaaaaact tgggcggaaa ccatgggttg
      901 gtgcttgcta agtgatgtgc aatcttgcat tgaagccagc ctgccgtatg ccgatatttg
      961 gctctccaac gagactgtca aacagcgttt attgcaagcg gatatcgtga ttcaattcgg
     1021 cacgcaaatt gtcagcaaac gggtgaatga atttttaaaa gcattccaag gggaatattg
     1081 ggtggtggaa caatcgcacg attaccataa tccaaacgct catcatcaaa cccgttttat
     1141 tgccaaagca catcactttt tgcgggtaca cccaccactt cgccaaaagc catggttgct
     1201 tgagccattg gcattatcgc aattctgctc cactttcata gagcaacaag tgggtggcag
     1261 cttaagtgaa gcctcacttg cacacaacat tcaagatgtt ttagcaatta atggcaactt
     1321 atttatcggc aatagcttat ttgttcgatt ggttgatgct ctgtgcaaac tgccggaagg
     1381 ctaccctgtt tacaccaacc gtggtgcaag cggtattgat ggcttaatcg caacaatggc
     1441 aggcattgca aaaggtagcg accgcccgac tgtcggtgtg gtaggtgata tttccgcatt
     1501 acacgatctt aactcaattg cattgctcac caaaattaac cagccgacca ttttatttgt
     1561 ggtgaataac agcggtggtg cgttgtttga tatgttgcct gttgatagca aagcgaaaga
     1621 tcaatattac cgccttgctc acaactttga atttgctcaa gtcgccacaa tgttcgggct
     1681 tgaatatatc cgcccgttta cttgggcaga tctaaaaacc aaactcaaac acgcctatgc
     1741 tcgtaaaggt gttaccattg tggaaatcaa agtaaatgaa cacgacggca gcaatatgta
     1801 taaatcattg ctaaaacaaa tttcacaggc ggaaattgcc taatcacaac tgcccctcgc
     1861 caatcctgcg aggggtaaaa atgtatcgac tatgctttcc tatcaatggc acgctcaaca
     1921 aggcacaccc gtggttttcc ttcacggctt gctcggctca caacaagact ggcaagctgt
     1981 tctccaacat ttgcaaaatt ttccgcaaat tcgaccgctt accattgacc ttccttttca
     2041 cggaaatagt aagcacatta cctgtgccga ttttgccaac ctgcgacaac aactacacgc
     2101 cacccttgaa agcctaatcg gctcacgacc tttctattta gtcggctact cactcggtgg
     2161 acgagcggca ctcgattatg tgttaaatat ggagaatccg aatctgcagg gcgtggtgtt
     2221 agaaggggcg aatatcggct taagcacaga aaacgaccgc cagattcgcc ggcaaaatga
     2281 ccgccattgg gcaaaccgtt tccgtcaaga acccatcgaa caagtgcttg aagattggta
     2341 caaacagcct gtttttgcgg atttaagcga tacggaaaga gaatgttata ttgatagcag
     2401 aaagcacaat caaggagagc aaattgctca aatgctggaa gccaccagcc tcgccaaaca
     2461 gcctgactac accgaaaaac tcaagcagac ggataagaat attgtctttt ttatcggtga
     2521 aaaggatcag aaatttcgca aaatggcatc aagccaccaa ctaccaacac aactgattgc
     2581 taatgcaggg cataacgctc atcgggctaa tgctaaaaat tttgtggaga aattggggtt
     2641 attgatactc cactccgaca gcgacctacg gtcgcaatcg gttaagcata acggtgcagc
     2701 tctgctgcac aaaagcccca gtggggctta atcagccgta ggctaaatat aacctagtac
     2761 ggctcagccg tgctaggtgt tagggctccc cctgcaaccg ttgcaataag cgatccatcg
     2821 cccgataacc aagtgcttcc gctaaatgca gttgttgaat attcgcctcg ccggctaaat
     2881 cagcaatagt ccgagaaact ttcaaaatac ggtggtaggc tcgtaccgat aaaccgagct
     2941 ttgtcaatgc agtttctaaa aatagggcat cttgtgccga taattggcaa tctcgctcaa
     3001 tttctcgggt ggtgagttga gaattgattt tacctgctcg ctcaaattgc atttttctgg
     3061 ctaaaaacac tcgcttgcga acctgctcgg tggtctctcc tcgattctcc gtcccacttt
     3121 gcaatgctcc ttgtggcaaa agtggcactt ctatagagag atcgaaacgg tctaagaaag
     3181 gtccggaaag gcggtttaaa taccgcatta cctgttgggg cgaagtgcgg ttatgcgtgc
     3241 cttgataatg ccctgtcggg cttgggttca tcgctgcaat taattgaaag cgtgccggaa
     3301 attgtacttt agcgttggct cgggaaatca caatttcgcc tgcctccaac ggctgacgta
     3361 acgcatcaag cactttacgt tcaaattcag gcaattcatc taagaacagc acaccgttat
     3421 gggcaagtga aatttccccc ggtttgggga tcgagccact gtaaaaacta gaaataaatg
     3481 tcataaaaac tagaaatagc tgtcagatta tttagaaaac aagaaatagg tgtcaaatta
     3541 ttatgagaaa aacacatagt tttcaacagg ttagaaaaat taaacccact tggatgagtg
     3601 tatcggggca tattccattt agaaacggag tcagtattcc ctatgaatcg actttagagc
     3661 gtgatttttt gatgtatttc acttatctac cttcagtaga tgaagtcgtc tctcaaccga
     3721 ctaccctacc tttcgtcaag aatgggatca cttataccta tacaccagat ttcttcttgt
     3781 catttacaga cggtcgaaag ccgatgttaa tcgaggtcaa accgaaagca aaatggcaga
     3841 agcactggaa agaatggaaa gaaaaatgga aagctgcaat acgtttttgc caagaaaacg
     3901 gttatgtatt ccatgtgtat gatgaagatc ggattcgaca tctagcgctt ttcaatctca
     3961 actatgttca gcgctataag cgaatacaac atgaacaaga agatatagat gctattctag
     4021 cccaagtaaa gctgatggga aataccacta ttgactattt actctctcga ttttttgcag
     4081 gttctctata tcgcatgaaa ggcctacaaa tcatctatca cttactggca acgaaacaac
     4141 tacattgcaa ttggtttcta ccacttaatg aatttaccga ggtatggggg aataatgatg
     4201 agtaactctg gatttacaga aaagcgctat catcaccgat tagatcgggg acgtattatt
     4261 ttgcaaaaag gtaatattta cctaaataga gaagatggag aacagtatga attggttgat
     4321 tatatggatg aaccctccca actgctcgta cgaaatctca acactcgtac aaccaaagtc
     4381 gtcagtattc atcagcttga aaatttcaaa atgaacgagc gaacggatct ttctgtggat
     4441 gtaaccgcta ttagtaatga atattgggag aaagcccaac aaaaatatga ggcaattaaa
     4501 ccgttattag ggatggatca acatcggcct tacgcagtta aggctcgtgc agaagatgtt
     4561 ggggtgaacc ctcgtacatt ataccgttgg ttacaagcct ataattccat aggatctatc
     4621 gcaggtttag tcgatcaaaa acgtggatgg caacaaggaa attcccgttt aacgccagag
     4681 caagacaagc tgatcgtgca ggtaatcaat gagttttacc tacataaaca acgcccaact
     4741 actgagcaaa ctattagaga aattcgccgc cgatgcaaaa ttgaaaaagt ggaaagccca
     4801 agcaaagaaa ccatccgtat gcgcattttg catatttcag aggaagagcg attacggaaa
     4861 cgcgggcaac gagaaaaggc acgcaacaaa tttaagccga agccaaatag ctttcctgat
     4921 gcggattatc cattgagtgt ggtacaaatt gaccatacac cagttgacct aattattgtg
     4981 gatagtaagt atcgtaaacc gattggccga ccgtttttga cggttgcgat agatatatac
     5041 agcagaatga ttgttggtta ttacctttca cttgatgcgc cttctgtaac ttcggtggcg
     5101 atgtgtattg cacgtggtat tttgccgaaa gaacgcctac tgcttgattt aggtttgcaa
     5161 ggctcagaat ggaatgcttt tggctaccca gtgaaagtgc atgtggataa tggcccagat
     5221 tttcaggctt tggatttatc taaatcttgt tctgcacacg gaatccatct tgaatttaga
     5281 ccgatggggc gacctgaata tggcggacat attgagcgtg ttatcggtac atttatgaaa
     5341 gaagttcaca gtttagcagg aacaacattc tccaacatca aagagcgtga ctcttacgat
     5401 tcggaaaaag aggccattat gactctcgat gagtttgaaa aatggttggt acattacatt
     5461 gtgaatgttt accacaaacg tgtgcattct gctttaggca tttctcctga acaaaaatgg
     5521 aagattggta tttttggaga tgaaaatgaa gtgggatgtg gttatccgca acttcctgtt
     5581 gatgaacaaa cactactact tgatttcttg ccaagtatca ctcgtaccat tcagcataat
     5641 ggtgtaacaa ttgacggact tcgttattac gatgttgcgc taaatatgta tatcagtgat
     5701 tcagatgaaa gcggtaaatc taaggaattt ctgtttcgcc gagacccgcg aaatatcagc
     5761 aaaatttggt tttatgatcc gaaattaaaa cgttacttcc caattccatt tgcaaatcag
     5821 gcaatgcccg aaatgagcat ttgggaatat agagaggttc gtagccgaat tgcgaataaa
     5881 ggtgataaat atatcaacga gcaacaagtt ttagacggtt taaccgagat gcgtgaaatg
     5941 gttgctgaat cggctcaacg gacgaaaaaa gcacgccgtc aggctgaacg acaaaaaatg
     6001 cacaaagcaa gtaagccaat tattgaaaca aaagtggaaa ctaaggctgt tgtaccagtc
     6061 gtagtaacat cgaatttgct tgctttagat gatgagagct tatcttttgg tgaggtggac
     6121 taatgcaata cgaacatgtt catgaaaaat tccgccatct tgtgacagcg gacaatcagg
     6181 agaggattgc gttcttggac gagccaagat ggttaggtta tggtgtcgcc aaagacatta
     6241 tggataattt ggtttcttta atgaataaac caaaacgccc acgaatgttg aatttgttga
     6301 ttgtcggcga ttccaataat ggaaaaacca cactgatccg ccgcttcttc gacttgtacg
     6361 gtcaggcgta tatcgacagt gattctaatg cgatttaccc tattcttctt gccgaagccc
     6421 caccaagtgc gaatgaaaaa gaattgtaca tctcattatt agagcggttc tacgtaccat
     6481 ataagccgac agatacgata gccaaacttc gttatcagac tatccatttg ttccgagaat
     6541 ttcgtgtcaa aatgttggtt attgacgagt ttcattctct gttggttggt acaccacgct
     6601 tacaacgaca ggtgatgaac gcaattaaga tgctttgtaa cgagctacaa attccaattg
     6661 tcggtgttgg tactcgtgat gcaattcggg tattacatac ggatcgacaa catgccagtc
     6721 gttttgatgt tgcggaattg ccaatatgga aactagataa ggaatttcaa aaactcctat
     6781 ttcaattcca agggatttta cctttgaggg agagttcaaa tctgcaatct ccagaacttg
     6841 ctacgaagat ccacaccatt tcaggtggga acttagggaa cgtgcatcgc ttactaacag
     6901 cttgtgcagt tcaagccatt acaagtggca cggaaaaaat caccttagac atcattgaga
     6961 aaaattcatg ggtacaacca acaaacggct atcgcaaaat aatcggataa aaaaaggtgt
     7021 tattcatacc cctatttatt caaatgaaag tattagctcg tggttaattc gtgcatcctt
     7081 tgattgtggt acagatccac tgacttttac agggttttat tgggaaaaac atcggttgtg
     7141 gacattagat ttagatcgtg gcttggaaaa tattgagcca actatctatg atgatgtaca
     7201 ggcattatcg ggtaaaatcc aactttcaga atattccttg tttcgcaggc tttaccctat
     7261 aaatgcagat gaaaccttag ctaaaggtca agtaagatgg gtgattccac gttcggcaag
     7321 gaatagaacc catcacattg gtcaacaata ttgtcctttg tgcttggatg agtcgccaca
     7381 tttacgcaat gattggcggt tagcgtggaa ttttggttgt ctcaagcata atatgatgtt
     7441 ggcgaacaga tgtttttgtt gtggtacatt gtatcaaccc catttactat cagcggaaaa
     7501 gaggcatttg aatcattgtc atcaatgtgg tgggaaactg gaacaaggca caatggaaat
     7561 gagtctagct gaaaagctga cattgcaagg tattaatcag gtactcgaaa aagattcagg
     7621 catctgtttt ggatacaagg tgtcgggtaa ggtgtggttt gatatgctcc gctactgcat
     7681 caacttattg agacgtgcat cagacagacc aaatcatgcc ttagcaaaat ttgtagttaa
     7741 tctacagatt gatgttgaaa atatatgtag ccccaaaaca ggactttctt ttgaacaact
     7801 tccgctaggt gaacgtacaa atttacttgt gaatgcctat catattttgg gaatggaagc
     7861 agattctatt cgtagtgcaa tttatttgtg tggcggaaca caaaaaacct ttatgtttga
     7921 aaaatatcct gatttttggc aagaatttat ggcactagca cccgcaggcc caaatagaac
     7981 acgaaaacgc accaagcccc aaaatgagtc tatcacagca attaatcgcc gttgggagcg
     8041 tttgaaacgc aaactacact taaataacga atgaaaatta atgtaataaa accacaggaa
     8101 gaaccttgct ccgcttgtgg caaaatttct cgcatttggc gcagatataa tggcgaaggc
     8161 tactgtgcca attgctatgc taagtggttt ccgaaaaaag agtgcagctg ttgccatcaa
     8221 ccaaagcgta tctatttgag ttcaacagta tgttgggatt gcgaaaaaca gactgactgt
     8281 gtacgttgcg gtaaggctgc gggtacattc aaaattggta aaattacccg ttatggtgca
     8341 gtttgtaatg tgtgttcacg ttattttcgt gaagaacgag aatgttttga gtgtggtcaa
     8401 ctatctagaa ctatgcttcg agcatcagag tcaggtcata gcgagctact ctgcttgaag
     8461 tgttttcaaa aatatcggtt tgcgacttgt aaaaactgtc gccgttatcg caaagttcat
     8521 gaccgtgata atcagctttg tcgaaaatgt agtgagcaac gaacttcaca atgcccgaag
     8581 tgcaaacagg atatgcctgc gggatatggt aatatttgtg cagattgttc taggcgaact
     8641 ctactgttca accttattcg aatgaatgtg catttattcc gccacaaaaa agtgaaaaga
     8701 gcatataaaa agttcatttt ttggtatctc gcaaagtgtg gcgtgagtgt tgtgctgaaa
     8761 aaatcagacg accacgtcct cttttttatg cgttgcgatg aaaattgggg caacattcca
     8821 gactaccgtg agttggttac attctttaaa cccaatggat tacggacgca tttgactgtg
     8881 ttgcgttggt tgcttgatac caatcaagtc aaagtagatg agagcttaaa agaggaaatg
     8941 gcggggttgg aacgtattca atccctattt aacaaattaa gtaactctgt accttgtatt
     9001 gcaaactact acacgcagtt acaacataaa tatgaggcgg gcaaaacatc actgaaatct
     9061 gttcgattag ctttacaacc tgcgattgat ttcatcagtt cagaatctgt ctcgttactg
     9121 ccgactcaag tacaactgaa tagctatctt gtggcaaaaa cgggacagat tgctgctatt
     9181 acaggcttta taaaccacct gaaccgagaa tatcattgtg aattagaaat tgaccgctcc
     9241 ctcattcaaa agatgaaaga aaagcagttg aagcagcaag caaaacagcg attagcgata
     9301 ctctacaagc aagaaaaact aagtatcaaa gagcaaaatg agctactctc agtcgtatta
     9361 ctgaatttgc acaacatttg gataaaatca ccgaaaaaat taagtatttc agagatagac
     9421 ggtatagcct actatgttga taatgagaaa aaatacttta taccaaaaga cattcacata
     9481 cgcctgatgg aataagctgt cgtcaatttt tatttttgcg atctgtgtcg agaaaataat
     9541 atttatgaat cgacagatga aataatattg ataaagtctc tttgtgtgtt caacaaacag
     9601 gagataaata tgacattaaa ggctcaattt cgtgaatggc ttaaaaaaga gcaagaacat
     9661 gatgaaatga tagggttcgc ccatatccct tgcattttat ctaaagtgga tagcaaactg
     9721 gcgattgtta gcggaaatgc ttatgagaag aaatatctca gatattggat caagtgtttt
     9781 aggttcgata gaaatatcag caagtatatt aaataggtta aatatctagc t
//
LOCUS       DANLXO010000098         9446 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.098, whole genome shotgun sequence.
ACCESSION   DANLXO010000098 DANLXO010000000
VERSION     DANLXO010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9446
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.098"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            248..661
                     /locus_tag="PXD69_002138"
     CDS             248..661
                     /locus_tag="PXD69_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284293.1"
                     /translation="MRNWFLFITLFISFSVKANDPFFGEKQETQASGNIAESNVEFAK
                     NTENITACKVPDNLSAKNIVTDFDKMTLIGLVKINEVMRALFIDEKQQLLALKENDLL
                     NNEIEIKHINLKSITYINWKLTKDCNIPYEINIKL"
     gene            670..1983
                     /gene="pilQ"
                     /locus_tag="PXD69_002139"
     CDS             670..1983
                     /gene="pilQ"
                     /locus_tag="PXD69_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HDL6284294.1"
                     /translation="MWRIFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNM
                     VLDDNIETKSTLRLENKSVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPI
                     MNLQNNGQNTPLVTAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSN
                     SLIVKDSAKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGH
                     YKFGGRLEGNGLNNVTNNLNVNFPITGGASAVLQVSSINSRVLDLELSALEQENSVEI
                     IASPRLLTTNKKPASIKQGTEIPYVMYNTKSEATDVEFKEAVLGLEVVPHLSTQNQIL
                     LDLIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPI
                     LGSIPFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK"
     gene            2064..2477
                     /gene="nusB"
                     /locus_tag="PXD69_002140"
     CDS             2064..2477
                     /gene="nusB"
                     /locus_tag="PXD69_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDL6284295.1"
                     /translation="MKISPRRRARECAVQAIYSWYISQNTVEEVELAFVTDQDMKGVD
                     MPYFRKLFRGVVDNVEAIDEALRPYLDRKESDVDPIERSILRLSTYELKFEHDVPFRV
                     VINEGIEVAKVFGSDDSHKYINGILDKLAPALGRK"
     gene            2540..3520
                     /gene="thiL"
                     /locus_tag="PXD69_002141"
     CDS             2540..3520
                     /gene="thiL"
                     /locus_tag="PXD69_002141"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDL6284296.1"
                     /translation="MGEFDIIERYFNASQRPPRKDVLLSIGDDCALTSLKPNQQLAIT
                     TDTLVCGTHFLPTISPADLAYKSVASNLSDLAAMGAEPAWISLALTLPEINHDWLAEF
                     SEHFFEILDHYNVDLIGGDTTCGPLSLTITAQGIVPQDRGLFRHNAKVGDWIYVSGTL
                     GDSAGGLQLLLNQQSEQVNWNKEQSYLIQRHLRPTPRVLLGLTIASIANAAIDISDGL
                     LSDLSHILKRSDCGAVLNLENFPLSDVLLSCYSRTEAEYFALNGGEDYELCFTVPNDN
                     KAKLDKALANIGVTYTCIGQIRSAKEGLTLLRHNQPVTLPSQRGYDHFKK"
     gene            3525..3998
                     /locus_tag="PXD69_002142"
     CDS             3525..3998
                     /locus_tag="PXD69_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDL6284297.1"
                     /translation="MKPINLKNPIHFFAFGFGSGLLKPAPGTWGSLAGLIVAIALWSI
                     TQSALFFGLLTLVSFIAGCVICTKASQDLEVHDDGRIVWDEIVAIFLMFTCLPEYNLL
                     GYLLAFISFRIFDILKPFPIRYFDEKLESGLGIMFDDILAAIFALISLHLLYYFI"
     gene            4005..4628
                     /locus_tag="PXD69_002143"
     CDS             4005..4628
                     /locus_tag="PXD69_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDL6284298.1"
                     /translation="MLTILFIHFAGLISPGPDFFYVVRQSASHSVKSGVLAATGISIG
                     IIFWAAFAIFGLAWLSNSIGSLFQYAIMIIGGCYLVYIGSQMVRVTENIIFVENKAQL
                     TPLNPWQEIKKGLLINIFNAKAGVYFTSVISAYVDNLSNTLQMFELLLLFVVSTFIYF
                     CVVALLFSRRPVRLFYAKYSRYIDNISGVIFILFGSMLIYEGFSHFI"
     gene            4740..5345
                     /gene="ruvA"
                     /locus_tag="PXD69_002144"
     CDS             4740..5345
                     /gene="ruvA"
                     /locus_tag="PXD69_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005686751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDL6284299.1"
                     /translation="MIGRLHGKIIEKQPPEILLDVQGVGYELLLPMTSFYSLPQIGEE
                     ATIFTHLVVREDAHLLFGFAQKQDRTLFRELIKTNGVGPKLALAILSAMSVSQFATAI
                     ENEELAKLTKIPGIGRKTAERLLVELKGKFKGMAQSDFFVEVSHEQIVASNTPDPANE
                     ALDALIALGYKPADAEKMIKKVNKSGATSEQLIREALKNSL"
     gene            5482..6486
                     /gene="ruvB"
                     /locus_tag="PXD69_002145"
     CDS             5482..6486
                     /gene="ruvB"
                     /locus_tag="PXD69_002145"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDL6284300.1"
                     /translation="MIEADRIISASPKREEEVIDRAIRPKLLADYVGQPSVHDQMEIF
                     IKAAKLREEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLT
                     NLEPYDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
                     TTRAGSLTSPLRDRFGIVQRLEFYSVDDLTLIVKRSADCLNLNLSADGAYEVARRSRG
                     TPRIANRLLRRVRDYADVRNNGIITSDIAKQALAMLDVDSEGFDFMDIKLLQAIVERF
                     DGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRIATSRTYAHLGITQID
                     "
     gene            complement(6585..7268)
                     /gene="artM"
                     /locus_tag="PXD69_002146"
     CDS             complement(6585..7268)
                     /gene="artM"
                     /locus_tag="PXD69_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HDL6284301.1"
                     /translation="MWWDYLVEISQGIGTSLQLTFVALIIAFILAIILTFILSLENRP
                     LKWLVNGFITLFTGTPLLIQFFLIYSGPGQFEWITESAAWVLLSDAWFCAMLALALNS
                     AAYSTLLFHGAVKAIPKGQWETCAALGLSRLDTLKILVPYALKRALPSYSNEIVLVFK
                     GTSLASTITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRVLA
                     FERFETEKA"
     gene            complement(7268..7939)
                     /gene="artQ"
                     /locus_tag="PXD69_002147"
     CDS             complement(7268..7939)
                     /gene="artQ"
                     /locus_tag="PXD69_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HDL6284302.1"
                     /translation="MSSDILNLLVNATLMTLGIALASLLIGMLLSIFFVVLETSKIAC
                     IRKPTSIIITLLRGLPEILVVFLIYFGLIQVIFLITDEFAELNAFWCGAIALGIIFAA
                     YASQSLRGAIKAIPVGQWESGTALGLSRAQVFVRIILPQVWRHALPGLSNQWLVLLKD
                     TALVSLIGVDDLMRQSELINANTHQPFTWYGIAALIYLAITLISQRVIKVLEGRFTRF
                     ERGVA"
     gene            complement(7939..8664)
                     /locus_tag="PXD69_002148"
     CDS             complement(7939..8664)
                     /locus_tag="PXD69_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDL6284303.1"
                     /translation="MKKLLLASAIAFATLSANAQETITFAMEPSYAPFETTNEKGEVI
                     GFDVDIAKALCEELKATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEARQKQVAFTN
                     AYLENSVSYVAMKGKFTPETAKNVGVQNGTTFQQYLSKNAKQYNLKPYASLQSAVLDL
                     KNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALLEKLN
                     SALATIKTNGKYEQIYNTWMAGK"
     gene            complement(8690..9424)
                     /gene="artP"
                     /locus_tag="PXD69_002149"
     CDS             complement(8690..9424)
                     /gene="artP"
                     /locus_tag="PXD69_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HDL6284304.1"
                     /translation="MAIRIQNVNFFYGSNQALFDINLEIEKGDTVVLLGPSGAGKSTL
                     IRTLNLMEVPQSGTLAIANHQFDLTAKTDSKAVSLLRREVGMVFQQYHLWPHLTVMQN
                     LIEAPMKVLGLSKEEAVARAKGHLARLRLSEFAERFPLHLSGGQQQRVAIARALMMQP
                     QVLLFDEPTAALDPEITAQVVDIIKELQSTGITQVIVTHEVGVARKVASKVVYMEKGT
                     IIEQGDASCFESPKTEQFAQYLSHSE"
BASE COUNT         2905 a         1973 c         1794 g         2774 t
ORIGIN      
        1 acagcaacat acaaatatta gctgaaaaac accaactaac cattgaaagt ttacaatgga
       61 atttagaaca aggtaaaagt attgaattga gtattatcgg caatagccga tctttatttg
      121 attttatcca ttcagttaag caaatacctt atttgaaata caatgcgatt agcctcatca
      181 aatctcggca agacagaaaa gttgaaatga atactacctt agtcatatta gctaataagg
      241 aataacaatg cgtaattggt ttttatttat tactttattt atcagttttt ctgtaaaagc
      301 aaatgatcct ttctttggag aaaaacagga aactcaagcc tcaggcaaca tcgctgaaag
      361 caatgtggaa tttgcaaaaa atactgaaaa catcaccgct tgtaaagtac ctgataacct
      421 ttctgcaaaa aatatagtaa ctgattttga caaaatgaca ctgataggat tagttaaaat
      481 caatgaagta atgcgtgcat tatttattga tgaaaaacaa caattacttg ctctaaaaga
      541 aaatgacttg cttaacaatg aaattgaaat aaaacatatt aatcttaaat ccattactta
      601 tattaactgg aaattaacta aagattgtaa tatcccttat gaaattaaca tcaaattata
      661 gaggttgata tgtggcgaat ttttatatat ttcttatgcg gtttttcatt agcctatgcg
      721 aataccattt ccatagtttt aaaaaatgct ccaacttcgc ttatttttac ttatttagcg
      781 gaagaaaccg gtaaaaatat ggtgcttgat gataatattg aaaccaaatc aacactacga
      841 ttagaaaata aatcggttga cgagattttt aaaacgcttg gcaaagtcaa taaattatcc
      901 ttaacgcaag aagatgatat tgtttatatt cacaaaaaag aggaaaaagc ggctgactta
      961 acgcctctgc caataatgaa tttgcaaaat aatgggcaaa atacaccgct tgtcaccgcc
     1021 cctaagttaa tcacaaaaac cttgaaacta cattatgcaa aggcttcaga ggtgattgag
     1081 tcgttaacca aaggcagcgg aacgttttta tcggaaaacg gttatattca ctttgatgaa
     1141 agaagcaata gcctgattgt gaaagacagt gcaaaatcgc ttaaaaatat cgagaattta
     1201 gtaaaacagc tcgaccaacc caccgagcaa attgcgattg aggctagaat tgtcactatc
     1261 agtagcgagc atttgcaaga gcttggcgtt cgctggggaa ttttttctcg tggggctggg
     1321 cactataaat ttggcggacg gctggaaggc aatggactca acaatgtcac caataactta
     1381 aatgtaaatt ttccgattac tggtggagca tctgccgtat tacaggtttc gtccattaat
     1441 agcagagtgc ttgatttaga attaagtgca ttagaacaag aaaatagtgt ggaaattatt
     1501 gccagcccac gcctgttaac caccaataaa aagccggcaa gtatcaagca aggcacggaa
     1561 attccttatg tgatgtacaa caccaaatcg gaagccaccg atgtcgaatt taaagaagcg
     1621 gtattagggc ttgaagtcgt tccacacctt tcaacccaaa atcaaattct actcgatctg
     1681 atcgttaccc aaaattcgcc aaattcccaa tccggcagta gtggcttaat tacgattgat
     1741 aaacaagagc taaatacgca agtatttgcc aaacacggcg aaaccattgt acttggtggt
     1801 atttttcaac atttaaccca aaaaggcgaa gataaagtgc cgattttagg ctcaattccc
     1861 ttcatcaagc ggttatttag tcaaactcga gataaaatca gcaaaagaga gctagtcatt
     1921 tttgtgacgc cttatatcct tcaatctaat gaaaagagca gcaaccgcaa aaaatcaaaa
     1981 tagcacatca taaacgcaag caaaaatagg ggaagtgtga tagaatcagc cgtcattttt
     2041 tgagttaaag atttagaggt tttatgaaaa tttccccacg tcgccgtgca agagaatgtg
     2101 cggtgcaagc catttattct tggtatattt cccaaaacac ggttgaagaa gtggaattgg
     2161 cgtttgtgac cgatcaagat atgaaaggcg ttgatatgcc ttatttccgt aaacttttcc
     2221 gtggcgttgt ggataatgta gaagccattg atgaagcatt acgcccttat ttagatcgta
     2281 aagagtcaga tgttgatcct attgaacgtt ctattttgcg tttatcaact tacgaattaa
     2341 aatttgaaca cgatgtgcct ttccgtgtag tcatcaatga agggattgaa gtcgctaaag
     2401 tgttcggctc tgatgacagc cacaaataca ttaacggcat tttagataaa ttagccccag
     2461 cattaggcag aaaataataa gattccccaa tttatacata aattggggat tttgattata
     2521 acgctcaagg agatttttta tgggtgaatt tgatattatc gaacgctatt ttaatgcttc
     2581 tcaacgccca cctcgcaaag atgttttact ttctatcggc gatgactgtg cgctcacatc
     2641 actcaaacca aatcagcaac ttgcgatcac aaccgatacc cttgtttgcg gcactcattt
     2701 tctaccgact atttcacctg ccgatctcgc ttataaaagt gtggcgtcca atttaagcga
     2761 tcttgccgca atgggtgcag aacctgcatg gatctcttta gccttaacct tacctgaaat
     2821 taatcacgat tggctagctg aatttagtga acatttcttt gagattcttg atcactataa
     2881 tgttgatttg attggagggg atactacttg tggaccacta tctttgacaa tcacagctca
     2941 agggattgtg ccacaagata gaggcttatt ccgccataat gctaaagtag gcgattggat
     3001 ctatgtttcc ggcacactcg gtgacagtgc aggtggtttg caacttctgc taaatcagca
     3061 aagcgagcaa gtgaattgga ataaagagca aagctacctg attcaacgcc atttacgccc
     3121 aacacctcga gttttacttg gcttgactat cgcctctatt gctaatgcag cgattgatat
     3181 ttcagatggt ctattgtctg atttaagcca tattttaaag cgcagtgact gtggtgcagt
     3241 attaaacctt gagaatttcc ccttgtctga cgtcttactt agttgttatt ctcgaacaga
     3301 ggcagaatat tttgccttaa acggtggcga agattacgaa ctctgcttta ccgtgccaaa
     3361 tgacaacaaa gccaaattag acaaagcatt agccaatatc ggagtaactt atacatgtat
     3421 tgggcaaatt cgttcggcta aagaaggttt aaccctatta cgtcataatc agcctgtcac
     3481 cttgccctca caacgaggct acgatcattt taaaaaataa cgcaatgaaa ccaattaatc
     3541 ttaaaaatcc gattcatttt tttgcctttg gctttggttc aggcttatta aagcctgctc
     3601 ccggcacctg gggtagcctc gccgggctaa ttgtagcaat agccttgtgg tctatcacac
     3661 aatccgccct gtttttcggc ttactcaccc tagtttcttt tattgccggt tgtgttattt
     3721 gcaccaaagc cagccaagat ctagaagtac acgatgacgg gcgaattgtt tgggacgaaa
     3781 tagttgccat ctttttgatg ttcacctgtt tgcctgaata caatcttctt ggctacctgc
     3841 tcgcctttat cagctttcgc atttttgata ttttgaagcc ttttccaatc cgctattttg
     3901 atgaaaaatt agaaagcggt ttaggcatta tgtttgatga tattctcgca gccatttttg
     3961 ccctgatttc acttcatctt ttatattatt tcatttaaaa atttatgctc actattttat
     4021 ttattcattt tgccgggctt atcagccccg gccccgattt cttctatgtc gtcagacaat
     4081 ccgccagcca ctcagttaaa agtggggtac ttgccgcaac cggaatctca atcggcatta
     4141 ttttttgggc agcctttgcg atttttggtt tagcgtggct cagtaatagt attggctcgc
     4201 tgtttcaata tgccattatg attatcggtg gctgttacct ggtttatatt ggctctcaaa
     4261 tggtacgggt aaccgaaaat atcatttttg ttgaaaataa agctcaactc acgccgctaa
     4321 acccttggca ggaaattaaa aaaggcttat taatcaatat ctttaatgcc aaagctggcg
     4381 tttactttac cagcgtcatt tcagcctatg tagataattt aagcaatacc ctacaaatgt
     4441 tcgaactact tctactcttt gtggtaagta cctttattta tttctgtgtg gtggcactac
     4501 tcttttctcg ccgaccggtc agactgttct atgccaaata tagtcgctat attgacaata
     4561 tctcaggcgt aattttcatc ttattcggct cgatgctgat ttatgaagga ttcagccact
     4621 ttatctaatc acaagcggtc tgatttcact aaaaatttgc aaattccgct atcaataaat
     4681 agtgttattt tatacagttt ctgctatgct actgccaatt ttaactctga gagaacaaaa
     4741 tgattggacg attacacggc aaaattattg aaaagcaacc gcctgaaatt ttattagacg
     4801 tgcaaggggt aggctatgaa ctactgctcc cgatgaccag tttctacagc ctgccacaaa
     4861 ttggcgaaga ggcgactatt ttcacccatt tagtggtgcg agaagatgct cacttgctat
     4921 tcggctttgc ccaaaaacaa gatagaactc tattccgtga attaattaaa accaacggtg
     4981 tcgggccgaa gctcgcgttg gcaattctat cagcaatgtc ggtgtcgcaa tttgccaccg
     5041 cgattgaaaa tgaagagctg gcaaaattaa ccaaaattcc gggaatcggt cggaaaaccg
     5101 cagaacgctt attggtggaa ctcaaaggca aatttaaagg aatggcacag agtgatttct
     5161 ttgtggaagt atcgcacgag caaattgtgg caagtaatac gccagacccg gcaaatgaag
     5221 cccttgatgc cttaatagcc ctaggctaca aacctgccga tgcggaaaaa atgattaaga
     5281 aagtgaataa atccggtgca acgagcgaac agcttattcg tgaggcgtta aaaaattcat
     5341 tatgatattg atagtatagg gcgaaagata tttcgcccct acaatctcat ttttaaaaat
     5401 atatgtgtag gggcaaatca atatttgccc tcatgagtaa tatagggtaa taccattcca
     5461 ctacaacaat aatctaaatg tatgattgaa gcagatagaa tcatcagtgc ctcgcctaag
     5521 cgtgaggaag aagttataga ccgagcaatc cgcccgaaac tgcttgccga ctatgtcggg
     5581 cagccttctg tgcatgatca aatggagatc ttcatcaaag ccgctaaatt gcgggaagag
     5641 gcattagatc acttgctcat tttcggcccg cccggtttgg gaaaaactac ccttgccaac
     5701 attgtggcaa acgaaatggg ggtgaatatt cgcacaactt cagggccggt gctggaaaaa
     5761 gcaggcgatt tggcagcaat gctgaccaac cttgaacctt acgatgtgct gtttattgat
     5821 gagattcacc gcctttctcc agcgattgaa gaagtgcttt atcctgcaat ggaagattac
     5881 cagctcgata ttatgattgg ggaaggacct gctgctcgtt ccatcaagct cgatctaccg
     5941 ccttttaccc ttgtaggggc aaccacccgt gccggctcac tgacctcacc gttacgagat
     6001 cgttttggga ttgtacaacg cttagaattt tactcagtgg acgatcttac tctgattgtc
     6061 aaacgcagcg ccgattgctt aaatctcaat ttgtcggcag acggtgctta tgaagtggct
     6121 cgccgctccc gtggcacacc ccgtattgcc aaccgcttac tccgccgagt tcgggattac
     6181 gccgatgtgc gtaataatgg cattattacc tcagacattg ccaaacaagc tctggcaatg
     6241 ctcgatgtgg attcggaagg ctttgatttt atggacatta aactgttgca agcgattgta
     6301 gaacgctttg atggcgggcc agttggatta gacaatcttg cggcagctat cggcgaagaa
     6361 cgagatacga ttgaagatgt gctagagcct tatctgattc agcaaggctt tctacaacgc
     6421 acaccaagag gcagaattgc taccagcaga acctatgccc atttaggtat aacccaaata
     6481 gattagtcat atttctaaag gcattgatac ataaataaaa agcggatagt tagtactatc
     6541 cgctttcatt tgcaaaaaat caataaaatt tgaccgctta tccgctaggc tttttcagtc
     6601 tcaaaacgct caaaagctaa tactctgctt tctaattttc tgagaacgat tgtcataatg
     6661 ccggtaatta ccaagtaaat aacccctgcc ataccataaa ttgataatgc gtcatactct
     6721 gtaccataaa gctggcgagc atagcccata atatccataa tcgtaatggt tgaagcaagc
     6781 gatgtgcctt taaaaactag cacaatctca ttactataag aaggtaaagc acgttttaat
     6841 gcgtaaggca ctaaaatttt cagtgtatct aaacggctca aaccaagggc tgcgcaagtt
     6901 tcccattgcc ccttcggaat cgcttttacc gcaccgtgga acaacaatgt cgaataggca
     6961 gcactgttta acgctaaagc caacattgca cagaaccaag cgtcggataa taatacccaa
     7021 gccgcacttt ctgtaatcca ttcaaattgc cccgggccac tataaatcaa gaaaaattga
     7081 attaataaag gcgttccggt aaaaagcgta ataaatccgt ttaccaacca ctttaacgga
     7141 cgattttcta acgagagaat aaacgtaaga atgatcgcta aaataaaggc aatgatgagc
     7201 gccacaaaag tgagctgtag gctggtgcca ataccctgtg aaatttcaac taaataatcc
     7261 caccacatta agcaactcct cgctcaaaac gggtaaatct accttctaat actttaatca
     7321 ctcgctggct aattagagta atcgctaaat aaataagtgc tgctatccca taccaagtaa
     7381 aaggttgatg agtattagca ttaattaact ccgattgacg cattaaatca tctaccccaa
     7441 ttaacgatac caatgccgta tcttttaaca gcactaacca ctgattgctt aagcctggta
     7501 aagcgtgtcg ccagacttga gggagaataa tgcgaacaaa tacttgcgct cggcttaacc
     7561 ctaacgccgt accagattcc cactgcccaa ctggaatagc tttaattgca ccacgtaaag
     7621 attgggaagc ataagcagca aaaataatac ccagcgcaat agccccacac cagaaagcat
     7681 ttaactccgc aaactcatcg gtgatcaaga aaataacttg gataagacca aaatagatca
     7741 aaaataccac taaaatctcc ggcaacccac gcaataatgt aattattata ctagttggtt
     7801 tacggataca tgcaatctta ctggtttcaa gtaccacaaa aaagattgac aataacattc
     7861 caatcaagag gcttgccagc gcaatcccta aggtcatcag ggttgcgttg acaagtaagt
     7921 ttaaaatatc gctagacatt atttcccagc catccaagta ttataaattt gctcatattt
     7981 accatttgtt ttgatggtag ctaaagccga atttaatttt tcaagcaatg cagtgttaga
     8041 tttatttacc gcaataccat atccattacc aaaaaaggct ttatcgacta ctttttcacc
     8101 cacgaaatct aactcttttt cggtttttag ccactctgcc aatactggtg tatcaccaaa
     8161 taccatatca acacgtccat tttttaaatc taacactgct gattgtaggc tagcgtaagg
     8221 ttttaaatta tattgtttgg catttttgct taagtattgt tgaaaagttg taccattttg
     8281 cacgccgaca ttcttagctg tttccggtgt aaatttcccc ttcattgcga cataacttac
     8341 tgagttttct aaataagcat tggtaaaggc aacctgtttt tgacgcgctt cagtaatatc
     8401 catgcctgaa ataattgcat caaaattttt aaattttaat cccgcaatta agctatcgaa
     8461 tgattgcgtt ttaaattcgc aagttgcttt tagttcttca cataatgctt ttgcaatatc
     8521 tacatcaaag ccaataactt cacctttttc atttgttgtt tcaaaagggg cgtaagaagg
     8581 ctccatcgca aaagtgatag tttcttgtgc attggcagaa agcgttgcaa atgcgatagc
     8641 ggaagctaat aataattttt tcattgttgt gtccttttgt tgttatagat tactctgagt
     8701 gagataaata ttgagcaaat tgctctgttt tcggtgattc aaaacaactt gcatcacctt
     8761 gttcaataat tgtacctttt tccatgtaca ccactttgct tgccacctta cgagcaacgc
     8821 ctacttcgtg agtcacaatc acctgagtaa tgcctgtaga ttgcaattct ttaataatat
     8881 caactacttg tgcagtaatt tccgggtcaa gtgctgcggt aggttcatca aataataaga
     8941 cctgtggctg catcatcagt gctctggcaa tcgccacccg ttgttgctga ccacctgaaa
     9001 gatgcagtgg gaaacgctcg gcaaactcgc tcaaacgcaa acgtgccaaa tgtccttttg
     9061 ctctggcaac cgcttcttct ttgcttaacc caagcacttt catcggggct tcaattaagt
     9121 tttgcattac ggttaaatgc ggccataaat gatactgctg gaacaccatt cccacctcac
     9181 ggcgtaacaa actcaccgct ttgctgtcgg ttttagcagt taaatcaaat tgatgatttg
     9241 caatcgccaa agtgcctgat tgcggtactt ccattaagtt taaggttcga attagggtac
     9301 ttttacctgc cccactcggg ccaagcaata caacagtatc ccctttttca atctctaagt
     9361 taatgtcaaa taaggcttgg tttgagccat aaaaaaaatt gacattttga atacgaattg
     9421 ccattcgtta aaatcctact acattt
//
LOCUS       DANLXO010000099         9433 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.099, whole genome shotgun sequence.
ACCESSION   DANLXO010000099 DANLXO010000000
VERSION     DANLXO010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9433
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.099"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            51..875
                     /locus_tag="PXD69_002150"
     CDS             51..875
                     /locus_tag="PXD69_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284305.1"
                     /translation="MEHFIGLGVAGNFAGHLEQAGEEADFAKVKTVEAVQPKAIFPFY
                     VPAENLGDYQFLSTYPLSNTAINFPSDADNLQIEPEVALICEIGYQDQQVVSLTPTHF
                     AAYNDCSIRRPNANKICEKKNWGASSKGLSAIHLPLDNFNKGGTLDNYNIACFHKRNG
                     ELNTYGIDSPAVEYSYFHQKLLDWIVERMNNQPDEGPMNNISEMLKQANYPTKAIISI
                     GATRYTPFGESNLLQVGDVSMVVVYNVKKYSHSQIEEMAKLETFSEDISALIQTVR"
     gene            1009..1833
                     /locus_tag="PXD69_002151"
     CDS             1009..1833
                     /locus_tag="PXD69_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDL6284306.1"
                     /translation="MKKLLLFLLFIGNPIFAKSPELMLVEQYQDQDISGWVMSEKLDG
                     VRGFWDGQQLISRQGYPLNPPDYFIQDFPPFAIDGELFSERGKFEEISSIVRSAQPKG
                     WHKLKLQVFDVPNAQGNLIERLATLENYLKQHPTLHIAIIEQIPIKDKAHLQQFYQSV
                     LEQGGEGVIVRNPNAGYIQGRSAQILKIKPVLDEECTVVAHHKGKGKYTDKLGAITCE
                     NQRGRFRIGSGFKDKERENPPPIGSIITYKYRGVTESGKPRFATFWRIRNDQISEN"
     gene            1927..2574
                     /gene="pxpB"
                     /locus_tag="PXD69_002152"
     CDS             1927..2574
                     /gene="pxpB"
                     /locus_tag="PXD69_002152"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDL6284307.1"
                     /translation="MLTIHHTSEHSLLCLAEPPAELAKQQQIWRVAEQARALDGVLEV
                     VVGMNNFTLFHAIGTDSTRLIQAVQQLWENDQAQAAQSPRLIEIPVHYGGEFGEDLFE
                     VAQFHNTTPEEIIRRHTEPTYTVFMIGFQPGFPYLNGLPQNLHTPRRNVPRTKVPAGS
                     VGIGGRQTGIYPFTSPGGWQLLGRTELPLFDIQHNPPTLLTAGDNVRFVAESITL"
     gene            2571..3500
                     /locus_tag="PXD69_002153"
     CDS             2571..3500
                     /locus_tag="PXD69_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDL6284308.1"
                     /translation="MIYIEIIQGFAHIQDLGRYGYRHLGVSHGGAMDSLALQAGNLLL
                     KNANNAPAIELTLGGMRITFDCDTPFCLTGALVEAELDGTPVFSYYRYTANARQTLTI
                     KRIVLGNYAYLCVAGGFLVPQVLGSASTALKAQFGGFQGRMLKAGDNIATGRRDSRLS
                     LMSIEPIDFTSRIRATASSEYEAFTADSRERFWQQGWQLQNNSNRMGYRFAEKALELT
                     ASLEMLSYAAPSGTVQVPPDGQPIVLMADAQTTGGYPKIACIIQADLGRLAQNPFGST
                     VQFEQVSREQAVEIYQKDQNYLETIRRKANESR"
     gene            3487..4224
                     /gene="pxpA"
                     /locus_tag="PXD69_002154"
     CDS             3487..4224
                     /gene="pxpA"
                     /locus_tag="PXD69_002154"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDL6284309.1"
                     /translation="MNHVDLNVDLAEGCGNDHSLLQLVTSANVCCGLHAGDYNEMRKA
                     INWAKENSVRVGAHPSFPDRENFGRTNMQLPDDELKACLLYQLGAAKALCDAENMPMS
                     YVKPHGALYNMAAKDPHLATLIANTVKQFDPNLKLMGLSGSLMLSIAEQHGLETISEV
                     FADRHYLADGSLVPRTRDDAMVESDDEAISQVLQMVLDGTVPTVDGGNVAIKADSICL
                     HGDGEHAVVFAERIKKELQAKGILVKA"
     gene            4499..5686
                     /locus_tag="PXD69_002155"
     CDS             4499..5686
                     /locus_tag="PXD69_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL6284310.1"
                     /translation="MSNNNRSALLGAAFLMATSAIGPGFLTQTATFTQTLLASFGFVI
                     LLSILLDIGAQLNIWRIVAVSEKKAQDIANAVLPGAGYFLALLIVMGGLAFNIGNVGG
                     AGLGLNILTGLSPEMGAVVSGAIAVGVFLFHEAGKVMDRFAQIMGFVMIALTIFVAVK
                     ANLPIDDAVVHTFVPEKLDVIAIVTLVGGTVGGYITFAGAHRLLDAGIKGKENLKEVS
                     KSSVSAILIASIMRVVLFLAVLGVVSMGVQLDPKNPAATPFAHVAGDVGLMIFGVVIW
                     AASITSVIGAAYTSVSFITSFSPFIEKHKNCFIVAFIVVSTAVLATIGRPAQVLVFVG
                     TLNGLILPISLGLILLAAHKTKIVGDYKHPVWMTVSGAIVVILMAVLSAMTLSKYISG
                     LMA"
     gene            5876..6130
                     /locus_tag="PXD69_002156"
     CDS             5876..6130
                     /locus_tag="PXD69_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase subunit gamma"
                     /protein_id="HDL6284311.1"
                     /translation="MAPAELFAEGINLMVAGMGFVMLFLLVLIYAISFISKIINQYFP
                     EPVSIPASKTVPQSPPDDLERLRPVIAAAIAHHRRINGQH"
     gene            6170..7996
                     /gene="oadA"
                     /locus_tag="PXD69_002157"
     CDS             6170..7996
                     /gene="oadA"
                     /locus_tag="PXD69_002157"
                     /EC_number="7.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-extruding oxaloacetate decarboxylase
                     subunit alpha"
                     /protein_id="HDL6284312.1"
                     /translation="MTTQPKKIAITDVVLRDAHQSLFATRLRLDDMLPIASELDNIGY
                     WSLETWGGATFDSCIRFLGEDPWVRLRELKKAMPKTPMQMLLRGQNLLGYRHYADDVV
                     DKFVERSVANGMSVFRVFDALNDPRNMQAALQAVKKHGGHAQGTLSYTTSPVHTLQTW
                     LDVTEQLLEIGVDSLVIKDMSGILTPMAAYELVSEIKKRYDVELHLHCHSTTGMAEMA
                     LLKAIEAGVDGVDTSISSMSGTYGHPATESIVATLQGTPYETGLSIPALEKISAYFRN
                     VRKKYAKFEGQLRGIDSRILVAQVPGGMLTNLESQLKQQNASDKLDLVLQEIPRVRED
                     LGNIPLVTPTSQIVGTQAVMNVLMGERYKTIAKETAGILKGEYGRTPAPVNKALQDRV
                     LEGAEPITDRPADHLPPELEKLVAEVTASAKEKGITLSENMIDDVLIVALFQQVGWKY
                     LENRNNPSAFEPVPSADEAKPAQASAASAPKAQTQSGSAIYTVELEGKAFVVKVSEGG
                     DITNIAPTPATPAPQAVDSAPKSANTLSANAEPVNAPMAGNILKVEVKEGQQVAEGDV
                     LLILEAMKMETQICAAKSGTIQGINVKQGDVVAVNDTLMSIA"
     gene            8006..9310
                     /locus_tag="PXD69_002158"
     CDS             8006..9310
                     /locus_tag="PXD69_002158"
                     /EC_number="7.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HDL6284313.1"
                     /translation="MESIIALFKGMGLMHLELGQAIMIVISLVLLWLAIARKFEPLLL
                     LPIGFGGLMSNIPEAGMAMTALDNLLHSGSAEQLAIIAAKVNSTSLDLHSIKDAIALA
                     APSVQNELEVMAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRM
                     LMLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPE
                     LLGAIAVAAYSYMALVPLIQPPIMKALTTEQERKIRMVQLRNVSNREKIIFPIVLLLL
                     VALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIFLGLSVGAKLVADK
                     FLQPQTLGILVLGVIAFGIGTASGVIMAKIMNRFSQHKINPLIGSAGVSAVPMAARVS
                     NKVGQEYDKQNFLLMHAMGPNVAGVIGSAIAAGVMLKYISTM"
BASE COUNT         2570 a         2129 c         2240 g         2494 t
ORIGIN      
        1 gttacaagcg gtaaaatttt atccaacttt taccaattaa ggagtagatt atggaacact
       61 ttatcggttt aggcgtggcc ggcaattttg ctggacattt agaacaagcc ggagaggagg
      121 cggattttgc gaaagtgaaa acagtggaag cagtgcagcc aaaggcgatt ttcccgtttt
      181 atgtgccggc ggaaaatttg ggggattatc agtttttatc cacctatccg ctttcaaata
      241 ctgcgattaa tttcccgagt gatgctgata atctgcaaat tgagcctgaa gtggcgttaa
      301 tttgtgaaat tggctaccaa gatcagcaag tggtttcgct cacgccaacc cattttgcgg
      361 cttacaatga ctgctctatc cgccgtccga atgcgaataa aatctgtgaa aagaaaaact
      421 ggggggcttc gtctaaaggg ctttcggcaa ttcatcttcc gttagataac ttcaacaaag
      481 gcggcacgct ggataattac aacatcgctt gtttccataa acgtaatggc gagctgaata
      541 cctacggcat cgacagccct gcggtggagt acagctattt ccatcaaaaa ttgctcgatt
      601 ggattgtaga gagaatgaat aatcagcccg atgaaggtcc gatgaacaac atttccgaaa
      661 tgttaaaaca ggcaaactac ccaactaaag cgattatcag cattggggca acacgctaca
      721 cgccttttgg cgaaagtaat ttattgcaag taggtgatgt aagtatggtg gtcgtttaca
      781 atgtgaagaa atattctcat agccaaattg aagaaatggc gaagttggaa acctttagcg
      841 aggatatttc tgctttaatt caaacagtac gttaaatttc tcactcaagc gatcagtttt
      901 tcggaaaatt ttgcgatctg cgtcgaaaaa ttgagattca tttctgactg tttgcacgct
      961 ttcctttata gtgccttgca tattcggagg cactatttcg gagagactat gaaaaaactg
     1021 ctcttattcc tactcttcat tggtaaccct atttttgcca aatcgcccga gttaatgctc
     1081 gttgagcaat atcaagatca agacatcagt ggctgggtaa tgtcagaaaa actcgatggc
     1141 gtgcgaggct tttgggacgg tcaacagctc atcagccgcc aaggttatcc gctcaatcca
     1201 cccgactatt ttattcaaga tttccctcct tttgcgattg acggcgaact gtttagcgaa
     1261 cggggcaaat ttgaggaaat ttcaagcatt gtgcgttccg ctcagcccaa aggttggcac
     1321 aagctgaaat tacaggtgtt cgatgtgcca aatgcacaag ggaatttgat tgaacggctg
     1381 gcgaccttag agaattatct gaagcaacat ccaacgctcc atatcgctat tattgagcaa
     1441 attccgatta aagataaagc ccaccttcaa caattttacc aatctgtgct ggaacaaggt
     1501 ggcgaagggg ttatcgttcg caacccgaat gcaggctata ttcaaggtcg ttctgcccaa
     1561 attttgaaaa tcaaaccggt tttagatgag gaatgcactg tggttgccca tcataaaggc
     1621 aaagggaaat ataccgataa actcggggca atcacttgtg aaaatcaacg tggacgtttt
     1681 cggattggca gcggttttaa agataaagaa cgagaaaatc cgccaccgat tggctcaatc
     1741 attacctata aatatcgagg tgtcacagaa tcaggcaagc ccagatttgc aacgttttgg
     1801 cgaataagaa atgatcaaat ttctgaaaat taagagctat ttcacatttt caacaaaata
     1861 aaattgacag tctggatata tcagcgtaaa aagttgttac ctttttgtaa caatttgagg
     1921 gcaattatgc tgacgattca tcataccagc gaacattccc tgctctgctt agccgaaccg
     1981 cctgcagagc ttgccaaaca gcaacagatt tggcgggtgg cagaacaggc aagagcctta
     2041 gatggcgtgt tggaagtggt ggtaggaatg aacaatttta ccctatttca cgccattggc
     2101 accgatagca cacgccttat ccaagcggtt caacaactct gggaaaacga ccaagcccaa
     2161 gccgcacaat ccccacgcct gattgaaatc cctgtccatt acggcggtga atttggcgaa
     2221 gatctgtttg aagtcgccca attccacaat accactcccg aagagattat ccgccgtcat
     2281 accgaaccga cttacaccgt gtttatgatc ggctttcaac ccggctttcc ttacctcaac
     2341 ggcttaccgc aaaatttaca caccccacgc cgaaacgtgc ctcgcaccaa agtccctgcc
     2401 ggttcggtcg gcatcggcgg caggcaaaca ggcatttatc cctttacctc accaggtggc
     2461 tggcaactgt taggacgaac cgagttaccg ttgtttgata ttcaacacaa tccgccaacg
     2521 ctacttacag ccggcgataa tgttagattt gtggcggaga gtataacgct atgatttata
     2581 tcgaaataat acagggtttt gcccacattc aagatttagg gcgttatggt tatcgccatt
     2641 taggcgtgag ccacggcggt gcgatggaca gccttgcctt acaagcgggt aatttattgt
     2701 taaaaaatgc aaataatgca cctgcgattg aacttaccct tggcggaatg cggattacct
     2761 ttgattgcga cacgccattt tgcctcaccg gtgcattggt ggaggcggag ctggacggca
     2821 cgccggtttt ttcctattac cgctacactg ccaacgcccg tcaaacgctg acgataaaac
     2881 ggattgttct cggcaattac gcctatttat gcgtggcagg cggttttctg gtgccgcagg
     2941 tgttaggttc ggcaagtacc gctctcaaag ctcaatttgg cggttttcaa ggcagaatgt
     3001 taaaagccgg cgataacatc gccacaggcc gcagagacag ccgactttct ttgatgtcga
     3061 ttgagccgat tgatttcacc tcacgcattc gggcaaccgc ttcgagcgaa tatgaagcct
     3121 ttaccgcaga tagccgtgaa cgcttttggc aacaagggtg gcaactgcaa aacaacagca
     3181 accgtatggg ctaccgtttt gcagaaaaag cgttggaatt gaccgcttcc cttgaaatgc
     3241 tctcctacgc agccccgagt ggtacggtgc aagtgccgcc ggacggccag ccgattgtgc
     3301 tgatggcaga tgcccaaacc accggtggtt atccgaaaat tgcctgcatt attcaggccg
     3361 atctcgggcg gttggcacaa aatccgttcg gctcaacggt gcaatttgag caagtaagcc
     3421 gtgaacaagc ggtcgaaatt tatcaaaaag atcaaaatta tttggaaaca attcggagaa
     3481 aagcgaatga atcacgttga tttaaatgtc gatcttgccg aaggttgtgg caacgatcat
     3541 tcattattac agctcgttac ttcggcgaat gtctgctgtg gcttgcacgc cggtgattac
     3601 aatgaaatgc gtaaagcgat taactgggcg aaggaaaaca gcgtgcgagt tggcgctcac
     3661 ccgagttttc cagataggga aaactttggg cgtaccaata tgcaactgcc cgatgatgaa
     3721 cttaaagcct gtctgctcta ccaactggga gccgccaaag ccttatgtga tgcggaaaat
     3781 atgccgatga gctacgttaa accgcacggc gctttataca atatggccgc caaagaccct
     3841 caccttgcca cccttatcgc caatacggtc aaacagttcg atcccaacct caaactgatg
     3901 ggcttatccg gcagcctgat gttgagcatt gccgagcagc acggtttgga aaccatttcc
     3961 gaagtctttg ccgaccgcca ctatttagct gacggctcgc tcgtgcctcg cacccgtgat
     4021 gatgcaatgg tagaaagcga tgatgaagcg atcagccaag tcttgcaaat ggtgttagac
     4081 ggcactgtac caaccgttga tggtggtaat gtggcgatta aagccgacag catttgctta
     4141 cacggtgacg gcgaacacgc cgtggtattt gccgagcgaa ttaaaaaaga gttacaggca
     4201 aaggggattt tggtgaaagc ctgatcctgt tttagtcaaa atggacggaa aaccagaaat
     4261 aaaactcttg gagatcgaac tcccctcttt agaaaagagg ggctggggga gatttgacag
     4321 aagcgattta cggagaaaat aagtaatttc aagaggttaa attgagcatt attaactctc
     4381 tcacttcgat gagttctact gccaaatctc ccctaacccc tctttgctaa agaggggaat
     4441 attaccatga taaatccacg aataatgact cattaacaac aaaaaaggaa ccaacacaat
     4501 gtcaaacaac aaccgtagcg ccctactcgg ggcagcattt ttaatggcga cctccgccat
     4561 cgggccgggg ttcttaaccc aaacagccac cttcacccaa accctacttg ccagcttcgg
     4621 ctttgtgatc ttactctcga tcttgcttga tatcggtgct caactgaata tttggcgaat
     4681 tgtagcagta tcggaaaaga aagctcaaga catcgccaat gccgtattgc cgggggcagg
     4741 ttactttctg gctctgctta tcgtgatggg cggtttagcc tttaatatcg gcaacgtggg
     4801 cggtgcaggt ttagggctaa acattctcac cggactttcc cctgaaatgg gtgcggtggt
     4861 cagcggtgcg attgccgtgg gcgtgttcct gttccatgaa gctggtaaag tgatggacag
     4921 atttgcacaa attatgggct ttgtgatgat tgctttaacc atcttcgttg ccgtaaaagc
     4981 caatctgcca atcgacgatg cggtggtgca tacctttgtg ccggaaaaat tagacgtgat
     5041 tgcgattgtc acgctagtgg gcggaactgt tggtggatac atcacctttg ctggtgcgca
     5101 ccgtttgctt gatgcaggca ttaaaggcaa agagaattta aaagaggtga gcaaaagctc
     5161 ggtgtcagcc attttaatcg cctcaattat gcgtgtggta ctgtttttag cggtgctggg
     5221 cgtggtgtca atgggcgtgc aacttgatcc gaaaaaccct gcggctaccc catttgccca
     5281 cgttgccggc gatgtcggtt tgatgatctt cggcgtggtg atttgggcag cctccattac
     5341 ctctgtgatt ggggcggctt atacctcggt ttccttcatt acttcattct cgccatttat
     5401 cgaaaaacac aaaaactgtt tcattgtcgc ctttattgtg gtttcaaccg ccgtgctggc
     5461 aaccatcggc agaccggcac aagtcttggt gtttgtaggg acgcttaacg gcttaattct
     5521 accgatttcc ctcgggttaa ttctgctggc agctcacaaa accaagattg tgggcgacta
     5581 caaacaccct gtgtggatga ccgtttcagg ggcgattgtg gtgattctaa tggcggtgct
     5641 aagtgcaatg accctttcaa aatatatttc ggggctaatg gcataacgac ttagcttcaa
     5701 gctaacctaa ggtcaggttt tgcaaatttt aactactctt gtaaaaaatt tgtaaaatct
     5761 gaccgcttgc gtttaaagtt tgtgatctac cactcatttt gaggctaaat aatttgaaat
     5821 aaatctgaat tttttctaca ttttcttcat catttctaca ttttaaggat aaattatggc
     5881 acctgcagaa ctctttgcgg aaggtataaa tttaatggta gccggaatgg gatttgttat
     5941 gctgttcctg ctggttttaa tttatgccat cagctttatt tccaagatta tcaatcaata
     6001 tttccccgaa cctgtttcta ttccagcctc taaaactgtg cctcaatctc ccccagatga
     6061 tttagagcgt ttacgccctg tgattgccgc tgcgattgct catcatcgtc gaattaacgg
     6121 gcaacattaa caagatttca aaaataaaat aattagaagg aatttgatta tgacaactca
     6181 accgaaaaaa attgcgatta ccgatgtggt tttgcgtgat gcacaccaat ccctttttgc
     6241 gactcgttta cgcttagacg atatgttacc gattgcctcc gagctggata atatcggcta
     6301 ttggtcgtta gaaacttggg gcggggcaac ttttgacagt tgtattcgtt ttttaggcga
     6361 agatccgtgg gtgcgtttac gtgagctgaa aaaagcaatg ccgaaaaccc caatgcaaat
     6421 gctgctacgt gggcaaaact tattgggtta tcgtcattat gccgacgatg tggtagataa
     6481 atttgtcgag cgttcggtgg caaacggtat gagtgtgttc cgtgtatttg atgccctcaa
     6541 cgaccctcgc aatatgcaag ccgcattaca agcggtcaaa aaacacggcg ggcacgcaca
     6601 aggtactttg agttacacca ccagccctgt tcatacccta caaacgtggt tggatgtaac
     6661 cgagcaatta ttggaaattg gcgtggattc gttggtgatc aaagatatgt cgggcatttt
     6721 aaccccaatg gcagcctatg aattagtcag cgaaattaaa aaacgctacg acgttgagct
     6781 acatctccat tgccattcaa ccaccggtat ggctgaaatg gcgttgctca aagcgattga
     6841 agccggtgtc gatggtgtcg atacctccat ttcatcaatg tccggcactt acggtcaccc
     6901 ggcaaccgag tctattgtcg ccacacttca aggcacgccg tatgaaaccg gcttgagcat
     6961 tccagctctg gagaaaatct ctgcctactt ccgtaacgtg cgtaaaaaat atgcaaaatt
     7021 tgaaggacag ctccgtggta tagatagccg tattttggtt gcccaagtgc cgggtggcat
     7081 gctgaccaac ctcgaaagcc aactcaagca acaaaatgcg tcggataaat tagacttggt
     7141 tttacaagaa attcctcgtg tgcgtgaaga tttaggcaat attccgttgg tgacaccaac
     7201 ctcacaaatt gtcggcacac aagcggtgat gaacgtatta atgggcgaac gttataaaac
     7261 tatcgccaaa gaaactgcag gtattttaaa aggcgaatat ggtcgcacac cggcaccggt
     7321 aaacaaagcc ttgcaagaca gagtgcttga gggagcagag ccgattaccg accgcccagc
     7381 cgatcatctt ccgccggaac tggaaaaatt agtggcagaa gtgactgcaa gtgcaaaaga
     7441 aaaaggcatt acgctatctg aaaacatgat tgatgatgta ttgattgtgg cactcttcca
     7501 acaagtgggc tggaaatatt tggaaaaccg caataatccg tctgcctttg agccagtgcc
     7561 aagtgctgat gaagcaaaac cggcacaagc ctccgctgct tctgcaccaa aagcccaaac
     7621 acaatccggt tcagccattt ataccgttga gcttgaaggc aaagcctttg tggtgaaggt
     7681 gagtgaaggt ggcgatataa ccaatatcgc tccaacacca gcaacaccgg ctccgcaagc
     7741 ggtcgattct gcaccaaaat ctgcaaatac gctatcagcc aatgccgaac cggtgaatgc
     7801 tccaatggca gggaacattt tgaaagtgga agtgaaagag gggcaacaag ttgctgaagg
     7861 cgatgtgtta ctgattcttg aagcaatgaa aatggaaacc caaatttgtg cggcaaaatc
     7921 cggcacgatt caaggcatta atgtcaaaca aggcgatgtt gtggcggtaa atgatacttt
     7981 aatgagtatt gcctaggagt ccggtatgga aagtattatt gcacttttta aaggtatggg
     8041 gctaatgcat ttagaactgg ggcaagcgat tatgattgtc atcagtttag tgttgctttg
     8101 gcttgccatc gcccgaaaat tcgaaccgct tttactactg cctattggct ttggtggttt
     8161 gatgtcaaac attccggaag caggtatggc aatgacggca ttagacaatt tactccacag
     8221 cggttctgcc gagcaactgg caattattgc tgctaaggta aatagtacaa gccttgatct
     8281 gcattcgatt aaagatgcca tcgcactggc tgctccctct gttcaaaatg agcttgaagt
     8341 aatggctggc gatatgggct ataccgccgg tgtgttggca ttattctata aagttgctat
     8401 cggctacggc gttgctccgc ttattatctt tatgggtgtc ggggcgatga ctgatttcgg
     8461 ccctttactt gccaaccctc gaatgttaat gcttggggct gcggctcaat ttgggatttt
     8521 tgctaccgta ctgggtgcat tagggctaaa ctggttaggc attatcgact tcacattgcc
     8581 acaagccgct gcgattggga ttatcggcgg ggcagatggc ccgaccgcga tttatcttgc
     8641 cagcaaactt gcccctgaat tattaggtgc gattgcggta gcggcttatt cttatatggc
     8701 gttagtgcca ctgattcagc cgccgattat gaaagcctta accaccgagc aagaacgtaa
     8761 aatccgaatg gttcagctcc gtaatgtaag caaccgtgag aaaattattt tccctatcgt
     8821 gttgctatta ttagtggcac tcttactgcc ggatgctgca ccgttattgg gaatgttctg
     8881 ctttggcaac ttactgcgaa ccagtggcgt agtagaacgc ttaaacgaca ccgcccaaaa
     8941 tgcgttaatc aatatcgtga cgattttctt agggttatcg gtgggggcaa aattggtcgc
     9001 agacaaattc ttacaaccgc aaacactagg cattttagta ttgggcgtga ttgcctttgg
     9061 gatcggcact gcaagcggtg tgattatggc gaaaataatg aaccgcttta gtcagcacaa
     9121 aatcaaccca cttatcggct cagcgggtgt ttctgccgtg ccgatggctg cacgggtatc
     9181 aaacaaagtc ggacaagagt acgataaaca aaacttcttg ttaatgcacg caatgggccc
     9241 aaacgttgcc ggcgtgattg gctctgcgat tgcagcgggg gtgatgttga aatacatttc
     9301 aacgatgtaa atcctcattt gcaaaaaacc tccgaaaaat aaccgctctc ggaggttttt
     9361 tctaaaaata ccgcttacca acactcttac aatacgaaaa ttccgctgta cattcttcac
     9421 taattgccgt agt
//
LOCUS       DANLXO010000100         9410 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.100, whole genome shotgun sequence.
ACCESSION   DANLXO010000100 DANLXO010000000
VERSION     DANLXO010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9410
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.100"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(18..554)
                     /gene="hpt"
                     /locus_tag="PXD69_002159"
     CDS             complement(18..554)
                     /gene="hpt"
                     /locus_tag="PXD69_002159"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDL6284314.1"
                     /translation="MEKHHIETLHSKEEVLNRINELAKEINQHYHQKQCQNLVVVGLL
                     RGSFMFMADLVRKLELPVEVDFLTASSYGSSTESSRDVKILKDLDGEIQGKDVLIVED
                     IIDTGFTLSKVGEILKLREPNSLAICTLLDKPCRREVDVPVKWVGFEIPDEFVVGYGI
                     DYAQKYRHLDYIAKVVIE"
     gene            complement(593..1942)
                     /gene="pmbA"
                     /locus_tag="PXD69_002160"
     CDS             complement(593..1942)
                     /gene="pmbA"
                     /locus_tag="PXD69_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HDL6284315.1"
                     /translation="MSITDKQTLLQQEQELRQAVEFALNFAKQAGAEAEVGVTKVAGL
                     SVSSRLEQVENIEFNNDGSLGISVYLGKRKGNASTSDLQPESIQKTVEAALAIAKYTS
                     EDACTGLADKELLAFEAEDLELYHQADISVDQAVELAIEAEHYALNADEKIVNSDGAT
                     FNSHSGVRVYGNTHGMLQSYLSSRYSLSCSVISAYEDQLERDYEYTIFREFDKLQAPK
                     WVGEQAAIKAVDRLNPQRIKTGEMSVIFYNDVATGLVGHLAGAISGGALYRKSSFLLD
                     KLGEQILPEWFAISERPHLLRQLASSAFDSEGVITQNREIITDGVLQTYLMTSYSGRK
                     MGLKSTGHAGGIHNWLVKPNRQGGLNTLLKEMGTGLLVTEMLGSAINSVTGEYSRGAA
                     GFWVENGEIQYPVAEITIAGQLQDMYKNLVAVGDDIEHRSNIQTGSILLEKMMVSGE"
     gene            2041..2571
                     /locus_tag="PXD69_002161"
     CDS             2041..2571
                     /locus_tag="PXD69_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HDL6284316.1"
                     /translation="MAKKRSKNEIDWTDEEEEIIWVSKSEIKRDSEHLKKIGAELIEL
                     TPQNLEKIPLDDDLKEAIRQAQGFKMEARRRQIQFIGKLLRNRDQEPIQEALDKVKNR
                     HNQQQALLHKLELVRNQLIAMGDASLDNLLTEYPQLDRQHLRNLIRGAIKEREANKPA
                     KNYREIYQYLKTEIVE"
     gene            2577..2948
                     /locus_tag="PXD69_002162"
     CDS             2577..2948
                     /locus_tag="PXD69_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HDL6284317.1"
                     /translation="MEYLSTILKAHIGLAYISLILLLTRGFLSSKMVDWRQYKILRIA
                     PHAVDTFLLITGIAAVAIFLAYDFFTLAQFSWLLPKLLFLVLYIVFATKAFKKGQPFS
                     LKFYLLAVVSFLLMMLTATFH"
     gene            2961..3674
                     /locus_tag="PXD69_002163"
     CDS             2961..3674
                     /locus_tag="PXD69_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HDL6284318.1"
                     /translation="MIGPFVNAGAIILGGVLGACLGSHLPERIRTTLPLVFGLCCFGL
                     GMMLTASVKYMSAVALALILGTIIGELIYLENRIGKVAGLARGLIDRLFPPVHSLSQE
                     EFLEKFIALLVLFCVSGTGIFGAIKEGMTGDPSILYIKSILDFFTAMIFAASLGYAIA
                     AIAVPLIIVQGILILLATVIMPLTTANMMADFSATGGLLLFATGFRICGIKNFPVANM
                     LPALLLAMPMSYFWEWLVH"
     gene            3677..4240
                     /locus_tag="PXD69_002164"
     CDS             3677..4240
                     /locus_tag="PXD69_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDL6284319.1"
                     /translation="MKKRIIVGISGASGFQYGYKVLELLKPFSEIETHLVISKGAELT
                     RTLETDYTREALHDLADQIHSLNNVGASIASGSFKTEGMVIAPCSMRTLAAIANGLSD
                     NLLTRAADVVLKERRKLVLMVREAPLNLAHIDNMRKVTEMGGIIFPPIPAFYQKPTSL
                     DEMVTHSVSHALSLLDIDIPNTPHWGE"
     gene            4303..4743
                     /locus_tag="PXD69_002165"
     CDS             4303..4743
                     /locus_tag="PXD69_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDL6284320.1"
                     /translation="MHNPIPTHILDFIQTNHVVNIAAHTEQDFWAANCFYAFDQENVR
                     LIILTAKKTRHAGLMLENPHIVGTICGQIEKINEIEGVQFSATAECLEDKQAEKAALQ
                     IYYQKHPLARLKPSDVWVLSFNTIKHTGNKLMFAKKTIWERNII"
     gene            complement(4747..5622)
                     /locus_tag="PXD69_002166"
     CDS             complement(4747..5622)
                     /locus_tag="PXD69_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6284321.1"
                     /translation="MMKTILIDEANQIKGFSHLYRLRSDLMLKYTEISVTETVEQEPA
                     EFEAGLRLVILLSGRSEIDFNSEVFELDASLKPQAAFLPLNRAEMGRKIFRKGQLQKE
                     LVIFLYPKWLIESQLNLASYHHFKQHLKAHQIILTQSMLKLIHDIVSEQEMQPFGLLE
                     KEGNLLALLASAFSQLTQAPRLKKDRVQQLTELLESGKFDGWSLKQIAIYFHTNVTTL
                     QNEFQHYHKTSIFAYLRRSKLEQAYKLLLQGQSITQAAEFAGYANSENFSTAFKRTFG
                     ITPSQIKRDKAKGII"
     gene            5728..7803
                     /locus_tag="PXD69_002167"
                     /pseudo
     CDS             5728..7803
                     /locus_tag="PXD69_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            7847..9283
                     /locus_tag="PXD69_002168"
     CDS             7847..9283
                     /locus_tag="PXD69_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3327 domain-containing protein"
                     /protein_id="HDL6284322.1"
                     /translation="MKKTTACILTFLVSSVLYANNITIELKQNDFVQGKLIQKAQQPL
                     SLSIIFPDQSSRLLAQNVFGEQDFMFKSELIGTATFSILANGATVSDQDFTLTIERHI
                     PISAQIAPPKVIENTQLEELSQKIAKNPEKQTALINDFWDKAKQAGTPLIEPLDEQQS
                     RVTFLWRGATKNARIWGGVSTEHDFMQRFGETDIWYKSYIVPNDTLVEYKLAPDVPTL
                     PVDENTQRRALLATAQADPLNKTAYFEKIGQNIHNTDKFNYASLLKLPNAPTQSFLTE
                     APNIAKGKLQQLIFESATLGNKHRLFVYLPDGFSAEKNYAVLYLFDGVEYTERVPTKT
                     ILDNMIAQKVILPTVAVFIENPSSESRRVELPANPIFTQVLAKELVPFVEKQLNIKTK
                     ERIIGGSSYGGLSSAYTVLNYPNVFSKALILSGSFWWQPKGTPSEQSHYIAQQFIQKE
                     KLPLCFFISAGFYESGKSAICKRSNYFA"
BASE COUNT         2879 a         1940 c         1758 g         2833 t
ORIGIN      
        1 gtagtgattg agttttttta ttcaatcact actttagcaa tataatctaa atgacgatat
       61 ttttgggcat aatcaatccc ataacccacc acaaattcat cggggatctc aaatcccacc
      121 cattttacgg gcacatcaac ttcgcggcgg caaggtttat ctaataaagt acaaatagca
      181 agtgaatttg gctcacgtaa cttgagaatc tcccctacct tgcttaaggt gaagccagta
      241 tcaataatat cttctacaat caatacatct ttaccttgaa tttcgccatc taaatctttt
      301 agaattttga catcacggct ggattccgtg ctgctgccat agcttgatgc ggttagaaaa
      361 tccacttcta caggtaactc tagctttctt actaaatctg ccataaacat aaacgagcct
      421 cgcaataaac caaccactac aaggttttgg cactgttttt ggtgatagtg ttgattgatt
      481 tcttttgcta attcattgat tcggtttaat acttcttctt ttgaatgtag cgtttcgata
      541 tgatgttttt ccattgattt ctccaaataa aattgattac aagcggccgt ttttactcgc
      601 ctgaaaccat cattttttct aataagattg aacctgtttg gatatttgag cggtgttcaa
      661 tatcatcgcc taccgccact aaatttttat acatatcttg cagttgccct gcaatggtaa
      721 tttccgctac agggtattga atttcaccgt tttctaccca aaatcctgct gcacctcgag
      781 agtattcccc tgttacgcta ttaatcgcag aacctagcat ttccgttact aataatcctg
      841 ttcccatttc cttaagtaac gtatttaaac caccttgacg atttggttta actaaccagt
      901 tatgaatacc acctgcgtgt cctgtacttt ttaaccccat tttacgccct gaatagctag
      961 tcattaaata cgtttgtagc acgccatcag taataatttc acggttttgg gtaattacac
     1021 cttcactatc aaacgcagaa gaggctaatt gacgcaacaa atgcggacgc tctgaaatcg
     1081 caaaccattc aggcagaatc tgttcgccta atttatctaa taagaaactt gatttgcggt
     1141 ataatgcacc gccactaata gctccggcca aatgccccac taaaccggtt gccacatcgt
     1201 tatagaaaat cacagacatt tcgccggtct taattcgttg cggattcaat ctatctaccg
     1261 ctttaattgc agcttgctcc cctacccatt tcggtgcttg taatttatca aactcacgga
     1321 aaatggtgta ttcataatca cgctcaagct gatcttcata agctgaaatc acgctacaag
     1381 agagtgaata tcggctcgac aggtaactct gcaacattcc gtgcgtattg ccataaacac
     1441 gcacgccact gtgagaattg aaagttgccc cgtcactatt cacaattttt tcgtctgcat
     1501 ttaaggcata atgctccgct tcaatcgcca attcgactgc ttgatcaact gaaatatccg
     1561 cttggtggta caattccaaa tcttctgcct caaaggcaag caattcttta tcagcaagcc
     1621 cggtacaagc atcttctgag gtatattttg caatcgcaag agctgcttca accgtttttt
     1681 gaatcgactc tggctgaaga tcggaggtgg aagcattacc tttgcgtttg cctaaataaa
     1741 ccgaaatacc gagagaacca tcgttattga actcgatgtt ttcaacttgc tctaaacggc
     1801 ttgaaaccga aagcccggca actttagtca cgcctacttc cgcctctgcc ccagcctgtt
     1861 ttgcaaaatt taaggcaaat tcgaccgctt gtcgtagctc ctgttcttgt tgtaacaagg
     1921 tttgtttatc tgtaattgac attttgttcc attgattgat tgcattgatg aatatattct
     1981 aactcaaatt tctgttagaa tacggcattt tttagagttt atgtaatgaa aggataaaga
     2041 atggctaaaa aacggagcaa aaacgaaatt gactggacag atgaggaaga agaaatcatc
     2101 tgggtcagca aaagtgagat aaaacgagat tctgaacact taaaaaaaat tggggctgaa
     2161 ttgatcgaat tgaccccaca aaatttggaa aaaattccac tagacgatga tttaaaagag
     2221 gcaattcgcc aagctcaagg ctttaaaatg gaggctcgcc gccgtcaaat tcaatttatc
     2281 ggcaaattat tacgcaaccg tgaccaggag ccgattcaag aagccttaga taaagtgaaa
     2341 aatcgccata atcagcaaca agccctatta cataaattgg aattagtgcg taatcaactg
     2401 attgcaatgg gcgatgcatc attagataat ttattgacgg aatatcctca attagaccgc
     2461 caacatttgc gtaatttaat tcgtggggca attaaagagc gtgaagccaa taaaccggca
     2521 aaaaattacc gtgaaattta tcaatattta aaaactgaaa tcgtggagtg attattatgg
     2581 agtacctatc aaccattctt aaagctcata tcggcttagc ttatattagt ttaattttat
     2641 tattaacccg tggattttta tcgtcaaaga tggtggattg gcgacaatat aaaattttgc
     2701 gcattgcccc acacgcagtt gataccttct tacttatcac cggtattgct gctgtcgcta
     2761 ttttcttagc ttatgatttt ttcaccttag cacaattcag ttggttgcta ccaaagttac
     2821 tcttcttagt actttatatt gtatttgcga caaaagcgtt caaaaaagga caaccgtttt
     2881 cgctcaaatt ttatctgtta gccgtagtct cattcttatt aatgatgcta actgccactt
     2941 ttcactaaat aagggaaact atgatcgggc cttttgtgaa tgccggtgca attattttag
     3001 ggggcgtgct gggtgcttgt ttagggagtc acctgcctga acgtattcgc actacgttgc
     3061 cgctggtatt cggcttatgc tgtttcggct taggtatgat gctgactgcc tcagtaaaat
     3121 atatgtctgc ggttgcctta gcattgattt taggcacgat catcggtgaa ctgatttatt
     3181 tagaaaacag aatcggtaaa gttgccggtt tagctcgtgg tttaattgac cgcctattcc
     3241 caccggtgca tagtctttcc caagaagagt ttttagagaa atttattgct ctgcttgtac
     3301 tgttttgtgt gagcggtacc ggcatttttg gtgcaataaa ggaaggaatg acaggcgatc
     3361 caagtattct ttacattaaa tcgattctag atttcttcac cgcaatgatt ttcgctgctt
     3421 cgttaggcta tgccattgcg gcgattgcag tgccgttgat tattgtgcaa gggattttaa
     3481 ttctactggc aaccgtgatt atgcctttaa ccactgccaa tatgatggca gatttctccg
     3541 caaccggcgg tttactgcta tttgcaaccg gctttcgcat ttgtggaatt aaaaactttc
     3601 cggtcgcaaa tatgctacca gcactactcc ttgcgatgcc gatgtcttat ttctgggaat
     3661 ggttggtaca ttaatgatga aaaaacgtat tattgtcggc attagtgggg caagtggttt
     3721 tcaatatggc tataaagtgc ttgaactgct gaaaccgttt tcagaaattg aaacccacct
     3781 tgtaatcagc aaaggagctg aactcactcg tactctcgaa acggattata cccgagaagc
     3841 tcttcatgat ttagctgatc aaatacattc gctaaacaat gtcggagcaa gcattgccag
     3901 tggttcattt aaaaccgaag gtatggtcat cgccccgtgt tctatgcgaa cccttgccgc
     3961 tattgccaac ggtttgagcg ataatttgct gacccgtgcg gcagatgtgg tgttgaaaga
     4021 acggcgtaaa ttggtattaa tggtgagaga agctccgctc aaccttgctc atattgacaa
     4081 tatgcgaaaa gtcacagaaa tgggcggcat tattttccca cccattccgg cgttttacca
     4141 aaagccaacc agccttgacg agatggtcac ccacagcgta agccatgccc tttccctgtt
     4201 ggatattgac attccaaata ccccacattg gggagaataa ttcggcttat cttttgcttt
     4261 ttgaaatgct agaatacctg ataaaaacta tcaggtattt ttatgcacaa tccaatcccg
     4321 acccatattt tagatttcat tcaaactaac cacgttgtca atattgcagc tcataccgaa
     4381 caggattttt gggcagcaaa ttgcttttat gcctttgacc aagaaaatgt tcgcttgatt
     4441 atcttaaccg ccaagaaaac cagacacgct ggcttgatgc ttgaaaaccc acatattgtc
     4501 ggcacaattt gtgggcaaat tgagaagatc aacgaaattg aaggtgtcca attctccgct
     4561 accgccgaat gtttagaaga taaacaagcc gaaaaagccg ctttgcaaat ttattaccaa
     4621 aaacacccgc ttgcacggct taagcctagc gatgtttggg tgttatcatt caataccatc
     4681 aagcacaccg gtaataaact tatgtttgcg aaaaagacga tttgggagag aaatataatt
     4741 tgaagctcaa ataatgcctt tagccttatc ccgtttgatt tggcttggtg ttatcccaaa
     4801 agttcgctta aatgccgttg aaaaattctc cgaattggca tatccggcaa attcagctgc
     4861 ttgtgtaata ctctgccctt gtaatagtaa tttataggct tgttctaatt tagaacgcct
     4921 taaatacgca aaaatagagg ttttgtggta atgctgaaat tcattttgta atgtggtcac
     4981 attggtatgg aaatatattg caatctgctt caaactccag ccgtcaaatt taccgctctc
     5041 aagcaattct gttaactgtt gcacccgatc tttttttaac cggggagcct gtgtcagctg
     5101 agaaaaagca cttgctaata aagctaatag attaccttct ttctcaagta acccaaatgg
     5161 ttgcatttcc tgctctgaca caatatcgtg aataagtttt aacatactct gagtcaaaat
     5221 aatttggtgg gcttttaaat gctgtttaaa gtgatgatag cttgccaaat ttaactggct
     5281 ttctattagc catttagggt agagaaagat aacaagctct ttttgaagtt gccctttcct
     5341 aaaaatttta cgccccattt cagctctatt tagcggtaaa aatgcggctt gaggttttaa
     5401 acttgcatct aattcaaata cttccgaatt aaaatcaatt tccgatcgac cactcaacaa
     5461 tataaccaat cttagtccgg cttcaaattc cgcaggttct tgctctacgg tttcagtaac
     5521 tgaaatctct gtatatttca gcataagatc tgaacgtagt cggtataaat gtgaaaaacc
     5581 ttttatttgg ttagcttcat caatcaagat tgttttcatc attaaaaact ttttttcgca
     5641 tagtcaaaat tttattttac aaaggttttt tgcataaaaa caagatatta ttatattcaa
     5701 taatcattct tatttaagga taaactaatg aaaataaaaa aatattcact ttctctaatc
     5761 actttagcga ttgtagctcc tcaagtatta gcagaaacaa cctctcaagc agaactaaat
     5821 gctattgagg tcaaagagaa attggcagct accaccggct atattcctgt ttatacgact
     5881 gtaggaacga aaacattaac ctctttggct cgtacacctt ttagtatcaa tgttgtctct
     5941 gatgatttaa tgcatgacca agctgttcgt tctgttaccg attcagtggc ttatacctcc
     6001 ggtatgatgg gtggctatcg tggtaacaat tcgcttatcg aaatctccat tcgaggcatt
     6061 ggcaataaaa gtgatggcag tacaattccg acctatttaa acggttctcg ctaccaaact
     6121 gcatttgaaa tcgatccgtt cttcttagaa agtatcaatg tgattaaagg tccaaactcc
     6181 attttatacg ggcaagctaa tcccggtggc gtaatggata ttatcaccaa aaaagccggc
     6241 agtaacccac atcgccattt gcaatttgtg gtgggaaacc atcaacgata ccaaatcggg
     6301 ctggatattg aagaaaatct ctccaatacc ttatccgctc gtttaatcgg tcaattagaa
     6361 cgaacaaact ggaataccta atttgtaaaa gaaaaaggcg gtgcttttgc tccaagcatt
     6421 ttatggaaac cgactacaaa tacagaactt aatgtttacg cttactatgc aaaaaaaccg
     6481 aaagccggtg atcgtaactt tttaccgaaa gaaggaacga ttaatagcgt aaacgggaag
     6541 gaactaccct atgatatgtt cctcagcgat ctgaactatc acggtttaaa agccgaacaa
     6601 atgcaagtag gttacagttt ctcacataaa tttacgccaa acctaacgtt ccgccaaaat
     6661 gcaagttacc ataatggcga agagaatttc aaaaatctag tttattgggg cgatgtcggt
     6721 tcggttttag aacgtagagc tcgccattgg gatgtcaaaa cccaagaaat caacttagat
     6781 aaccaattag aatgggtatt tagcacagca aatataaatc ataccttgtt agccggtatt
     6841 gattataaac gagtgcgtaa agatcttgat aactatatgg ggattgcccc tgattttgat
     6901 tggcagaacc ctgtttatgg cgtgaccgtt actgagccta gcttattttc aagtgaagtg
     6961 aagcatttaa aacaacttgg ggtttatcta caagatcaaa tagaaatcgg taattttgac
     7021 ttcctgttag gcggtcgtta cgatcgagca aaaaacagca accaagatcg tttgaacagt
     7081 aaaacagaga ataaccaaga aggaaaattt acttggcgta caggcgtagt ttacaacttt
     7141 gaaaacggta tcgctccgta tatcagctac agcacttctt ttgtgccatc ggctgaaaaa
     7201 gatgctcaag gaaatttctt aaaaccaaca actgctgggc aatgggaagt gggaatgaaa
     7261 taccaaccta cccaagacac cttactgacc ttagcaggat ttaaaattac acaaaaagat
     7321 ttagccaatt atcaatggca aacccgctct tatgagcaaa ttggtgaagt gcaaaccaaa
     7381 ggaattgaag tgagtttaaa tcagcaatta tccgataaat tttcaatagc ggcttcttat
     7441 gcttacttaa aaaaagagat tactgcagat aaagatggca cgacgattgg aaaaacgcag
     7501 tggggagtgc ctcgccatca agcatctctt tgggcaaaat ataaattctt tgataagctg
     7561 accgccggtg taggtgtacg ctatatggga acgacttttg gcgataacca aaatactttt
     7621 accgtaccgg catacacact ttacgatatg atgctagctt atgattttat gcctaactta
     7681 aacttacagc tcaacgcaca aaacctgacg aataaaaaat atgtcgcaag ctgtgccaat
     7741 aatttttcct gtttctatgg aaaagatcgc aatttaagtg caacgttaaa ctatcatttt
     7801 taatctcaac agccctcaaa tgagggctta aacttttgca aaaaatatga aaaaaacgac
     7861 cgcttgtatt cttacttttt tggtttcatc tgtgctttat gctaacaata taaccattga
     7921 gcttaaacag aatgattttg tgcaaggcaa attgattcag aaggctcaac agccactttc
     7981 cttgtcgatt atttttcctg accaaagctc tcgcctgctg gctcaaaatg tctttggtga
     8041 acaagatttt atgtttaaat cagaactaat cggcacagct actttttcta ttctagcgaa
     8101 tggtgcaacc gtttcagacc aagattttac cttaacgatt gagcggcata ttccaatctc
     8161 ggcacaaatt gctccaccta aagtaattga aaatacacag cttgaagaac tcagccaaaa
     8221 aattgcaaaa aatccagaaa aacagaccgc tttaattaac gatttttggg ataaagcaaa
     8281 acaagccggc acaccattga ttgaaccatt ggacgaacag caaagccgtg taactttttt
     8341 atggcgtgga gcaacgaaaa atgcccgtat ttggggcggt gtgagtactg aacacgattt
     8401 tatgcaacgc tttggtgaaa cggatatatg gtataaaagt tatatagtgc ccaatgacac
     8461 tttagtggaa tacaaattag ctccagatgt gccgacattg cccgttgatg agaataccca
     8521 acgcagagcg ttactggcta cggctcaagc cgatccactc aataaaacag catacttcga
     8581 gaaaatcgga caaaatattc ataataccga taaattcaac tacgcttcgc tacttaaatt
     8641 gccaaacgca cctactcaat cttttttgac tgaagctcca aatattgcaa aaggtaaact
     8701 gcagcagttg atttttgaga gtgcaacact cggcaataaa cacagattat tcgtctatct
     8761 gcctgacggt tttagtgcag aaaaaaacta tgcggttctc tatttatttg atggtgttga
     8821 atataccgaa cgagtgccaa ctaaaaccat tttagataat atgatcgctc agaaagtgat
     8881 tctgcctact gtagcggtgt ttatcgaaaa tccatcgagt gaatcaagac gtgtcgagct
     8941 gcctgccaat cccatattta cgcaagtatt ggcaaaagaa cttgtacctt ttgttgaaaa
     9001 acagctcaat ataaaaacaa aggagcgaat tattggcggc tctagctatg gcgggctatc
     9061 ctctgcttac accgtactca actatcctaa tgtatttagt aaagcattga ttctatccgg
     9121 ttcattttgg tggcaaccca aaggcacacc tagtgaacaa agccactata ttgctcaaca
     9181 atttatccaa aaagaaaaat taccactctg ttttttcatc agtgcaggtt tttatgaaag
     9241 cgggaaatcg gctatttgta agcggtcgaa ttattttgca tagaattaca ctcaattttg
     9301 catagataaa aattaaaaac tatgcaaaat aattgtagaa gatcaaacct aatctgacag
     9361 tcccccgttt taaattaccg tgtctgtcag attaatttga gcttaaattc
//
LOCUS       DANLXO010000101         9323 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.101, whole genome shotgun sequence.
ACCESSION   DANLXO010000101 DANLXO010000000
VERSION     DANLXO010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9323
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.101"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            72..1085
                     /gene="cas1c"
                     /locus_tag="PXD69_002169"
     CDS             72..1085
                     /gene="cas1c"
                     /locus_tag="PXD69_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated endonuclease Cas1"
                     /protein_id="HDL6284323.1"
                     /translation="MRKLQNTLYITTQGSYLHKERETLVVEQDRKKVAQLPIHSIGHI
                     FCFGNVLVSPFLMGFCGENNVNLAFFTENGRYLGRLQGRQSGNVLLRRAQYKKSETNP
                     VPVARNIIAAKIQASKRVLQRQIRNHGENADLQSTITALNYSLQQLKTADNLDLIRGI
                     EGDAAARYFGVFSHLIKENSGFHFDGRNRRPPRDGVNALLSFLYSIVGKDISGALQGV
                     GLDPQIGFLHADRSGRDSLAQDILEEFRAWWVDRMVLSLINRGQVKPDDFVTEASGAV
                     TLKPEARKLLFQTLQAKKQEKIIHPFLEEEVEIGLLPYIQAMLLARHLRGDLAEYPPF
                     LMR"
     gene            1152..1445
                     /gene="cas2"
                     /locus_tag="PXD69_002170"
     CDS             1152..1445
                     /gene="cas2"
                     /locus_tag="PXD69_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDL6284324.1"
                     /translation="MLMLITYDISFDDPEGQARLRRIAKHCLDYGVRAQYSVFECDVT
                     PAQWVTLKNKLLATYNPDCDSLRFYHLGSKWRNKVEHHGAKPSVDIFKDTLIL"
     repeat_region   1637..2471
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=1637..1656
                     /rpt_unit_seq="cagccacctacgcgtggctg"
     gene            2721..4196
                     /gene="rng"
                     /locus_tag="PXD69_002171"
     CDS             2721..4196
                     /gene="rng"
                     /locus_tag="PXD69_002171"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HDL6284325.1"
                     /translation="MSSTELLVNVTPSETRVALVENGILKELHIEREAKRGIVGNIYK
                     GRVTRVLPGMQSAFVDIGLEKAAFLHASDIVSHTECVDENEKKQFLVKDISELVREGQ
                     DIVVQVVKDPIGTKGARLTTDITLPSRYLVFMPENSHVGVSQRIESEEERARLKSLVE
                     PYCDELGGFIVRTAAEEATEESLKQDVEFLKRLWRKVLERKGKYSAKSMLYGELALAQ
                     RVLRDFIGTHINSVRIDSKLTYEQVREFLAEFMPELTDCVTLYTGQQTLFDAYGVEKA
                     IQKALDKRVDLKSGGYLIIEQTEAMTTIDINTGAFVGHRNLAHTIFNTNIEAIQAIAH
                     QLQLRNLGGIIIIDFIDMQEEEHRERVLQSLQEALKGDRVKTNVNGFTQLGLVEMTRK
                     RTRESLERILCCDCQACQGRGTVKTVETVCYEIMREIVRVHHLFKTENIHVYAAKDVA
                     EYLINEESHALLAELQAFIGKKIEIKLEPYYHQEQFDVVVM"
     gene            4350..5852
                     /gene="lysS"
                     /locus_tag="PXD69_002172"
     CDS             4350..5852
                     /gene="lysS"
                     /locus_tag="PXD69_002172"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDL6284326.1"
                     /translation="MSEVENQELDLNGEMLARREKLNKIREQGNAFPNTFRRDALAKD
                     LHAQYDAVEGETLKEQNIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSD
                     SVYEEKVSLWDLGDIVGVEGALFKTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLE
                     TRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKP
                     FITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEY
                     YQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYGN
                     GIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVAEHQLIQPTFLMAHPAE
                     ISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEA
                     MFKDEDFIVALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFPAMRQK"
     gene            complement(5930..7003)
                     /locus_tag="PXD69_002173"
     CDS             complement(5930..7003)
                     /locus_tag="PXD69_002173"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HDL6284327.1"
                     /translation="MAQQITLFEDVPLPLTLGGELSPITVAYQTYGRLNAEKSNAVLL
                     CHALTGDAKPYYDSPTEKGWWQDFIGKGLAFDTDKYFFICSNVLGGCKGTTGPASINP
                     KTNKPYGSLFPIITVQDIVNVQKALLDYLEIPQLHAVVGGSFGGMQATQWGISYPDKV
                     RNIINLCSSLTLSAEAIGFNHVMRQAIINDPHFNGGNYYDGIAPDNGLKIARMLGMLT
                     YRTDIQLAKAFGRETKQQGQIWGDHFQVESYLSYQGTKFLGRFDANTYLRLLRALDLY
                     DPALGYENEETALKRIKANYTFVAVTSDQLFKQVDVYKSKQKLEQAGVNLEFHEFHSD
                     FGHDAFLVDYDFFEPMIKAGLAK"
     gene            7271..7954
                     /locus_tag="PXD69_002174"
     CDS             7271..7954
                     /locus_tag="PXD69_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL6284328.1"
                     /translation="MNQTRDRLEKLPLFHKMQQFIIKALKIIAIFPLLGIAILLVVDS
                     LTSYIVRDKIYTDSKQIPYREYAVVLGTAKFYSKDVINQYYKYRLEAAKQLVQEGKVN
                     QLLLSGDNKTPYYNEPKTMTSDLLKMGIATSKIKQDYAGYTTFYSIIRAKKVYKLPPF
                     TIISQKFHCERALFIAKFRDIDAICYAATYPEGAYQVRMREILARSAMVFSLLIGKEP
                     ESLEDIRSK"
     gene            complement(7991..8830)
                     /gene="purU"
                     /locus_tag="PXD69_002175"
     CDS             complement(7991..8830)
                     /gene="purU"
                     /locus_tag="PXD69_002175"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDL6284329.1"
                     /translation="MLQQHKILLTECPDDTGLVAKITNICYKHQLNIIKNSEFVENET
                     KRFFMRTELNGIFNDETLLTDLKFTLPEGSSYKLLPKQRKRIVILVTKEAHCLGDLLM
                     KNYYGGLDVEIAAVIGNHETLKSLVERFDIPFHLVSHENLTRVEHDKLLAEKIDEYSP
                     DYIVLAKYMRVLNPEFVARYPNRVVNIHHSFLPAFIGAKPYHRAYERGVKIIGATAHF
                     VNDELDEGPIIMQNVINVDHTYTAEAMMRAGRDVEKTVLSQALELVLADKVFVYKNKT
                     IIL"
     gene            complement(8900..9301)
                     /locus_tag="PXD69_002176"
     CDS             complement(8900..9301)
                     /locus_tag="PXD69_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
                     /protein_id="HDL6284330.1"
                     /translation="MSALKSLLNIRSLRALAKDLALEQLKSISEKLDIIIAEKEEEMK
                     QEELEKLKQLESLNKYREMLKQDGLSIDELAELLADKVIKTRKALSPRPAKYKFVDAN
                     GNEKTWTGQGRTPKALQDALDSGKKLEDFAI"
BASE COUNT         2792 a         1672 c         2006 g         2853 t
ORIGIN      
        1 ttacatcaaa aatcagaaaa atatatttaa ataattatga tgtgagatta aagttaaagg
       61 gattttcaac catgcgcaaa ctacaaaaca ccctctacat taccacccaa ggtagctatt
      121 tgcacaaaga gcgagaaacc ttggtggtgg agcaagatcg gaagaaagtg gcacagttgc
      181 cgattcattc cattgggcat attttttgtt ttggcaatgt gttagtgtcg ccgtttttaa
      241 tgggattttg tggcgaaaat aacgtaaatt tagcgttttt taccgaaaat gggcgttatc
      301 ttgggcggtt gcaggggcgg caaagtggta atgtattgtt acgccgagcc cagtataaaa
      361 agtcggagac caaccctgtt cctgtggctc gcaacatcat tgcagccaaa attcaagcat
      421 ctaagcgggt gttacaacgg caaattcgta atcacggcga aaatgctgac cttcaatcga
      481 caattaccgc attaaattac agcctgcaac agttgaaaac agcagacaat ttggatttga
      541 ttcgtggcat tgagggcgat gctgcggctc gttattttgg ggtgttttct catcttatca
      601 aagaaaatag cggtttccac tttgacggac gtaatcgccg cccacctcgt gacggtgtga
      661 atgcgttgct ttcatttctt tatagcattg tagggaaaga tattagcggg gcattgcaag
      721 gcgtggggct tgatccccag attggctttt tgcatgcaga tcgttcgggg cgagatagct
      781 tagctcaaga tattttggag gaatttcgag cgtggtgggt ggacagaatg gtgctgtcgc
      841 tgatcaatcg agggcaggtt aagcctgatg attttgtgac ggaagccagt ggtgcggtaa
      901 cgctcaagcc tgaagccaga aaattactat ttcaaacctt gcaagcgaaa aaacaagaaa
      961 aaatcatcca cccattttta gaggaagaag tggaaatcgg cttgttacct tatatccaag
     1021 cgatgttatt ggctcgtcat ttgcgtggcg atttggcaga atatccgccg tttttaatgc
     1081 gttaaaatct gcaaaatttt gttgaaattt gaccgcttgt ttatgtttta ttcattgagg
     1141 aattagcaac tatgctgatg ttgattacct acgacatttc atttgatgac cccgaagggc
     1201 aggctcgcct acgccgtatt gctaagcatt gtttggatta tggtgtgcgg gcgcaatatt
     1261 ctgtgtttga gtgtgatgtt actcctgctc agtgggtaac attgaaaaat aaattattgg
     1321 caacttacaa cccagactgt gatagtttgc gcttttacca tttaggcagt aaatggagga
     1381 ataaagttga gcaccatggc gcaaaacctt cagtggatat ttttaaagat acgctgattt
     1441 tataaatcgc tagcctgtag ttctcataaa aatgtagcaa ggttagcgaa tctatattgt
     1501 tctttaataa tcaaggaatt agaaaaaata aggcacaata tattggcgat atgctatact
     1561 ttatccactc tctacaaaac gttagcgaat aaagggctaa aaagcctgat atttcaatac
     1621 gttatcttat agggaccagc cacctacgcg tggctgcgaa ttgaaaccac cgctgctact
     1681 tcggttatcg gagtagtttg cacccagcca cctacgcgtg gctgcgaatt gaaacgtggc
     1741 acagtaacac gagcagatgc tgataaacgc ccagccacct acgcgtggct gcgaattgaa
     1801 accagcagcc gttgttaccg tggtgcaatg cttgcgccag ccacctacgc gtggctgcga
     1861 attgaaacta cacttattgc catagggtag tagtaatctt ttacccagcc acctacgcgt
     1921 ggctgcgaat tgaaactgcg atttttggat ttttcgggcg ataaatgata ccagccacct
     1981 acgcgtggct gtgaattgaa actcgtggct ggttatacaa agaaaagcat tgttgggcag
     2041 ccacctacgc gtggctgtga attgaaactt aaatctaaag ctaaagctat tttattaatt
     2101 aaagcagcca cctacgcgtg gctgtgaatt gaaactttac cgtttaccga ttggatttta
     2161 atgctagagg cagccaccta cgcgtggctg tgaattgaaa ccctaaattg ccgtaaaaat
     2221 ctgccattag ctacgcgcag ccacctacgc gtggctgtga attgaaacct cataacgaat
     2281 ccaatcctgt tcggttaatc cccgcagcca cctacgcgtg gctgtgaatt gaaacagggg
     2341 cgtgtaccgc aatcaatttt aattataacc aagcagccac ctacgcgtgg ctgtgaattg
     2401 aaacctcgtc ttgaattgga aaatcaaggg cgacaatagg cagccacctt cgcgtggctg
     2461 tgtattgaaa cggtgtaccc acaaatccta tgttttcgcc attggctgct accttcgcat
     2521 caatatatat tgaaatatca atggcaaatt tgtatgttgt taattagact gattgcatct
     2581 gctatgtatc atagtaatga cgaaaatatt ctattttgca aaaaataatc agaaattacc
     2641 cgcttgttcg aactgagttt ttgttttcta agatgtgaaa tgatacactt tagatagttt
     2701 taaaatatag agacagtaag atgagtagta cggaattatt agtgaatgtt accccaagcg
     2761 aaacaagggt agcgttggta gaaaacggaa tattgaaaga attacatatt gagcgggaag
     2821 ctaaacgcgg gattgttggt aatatttata agggaagggt gacaagggta ttaccaggta
     2881 tgcaatctgc ttttgtggat atcggcttgg agaaggctgc ttttttgcac gcttctgaca
     2941 tcgtttcgca tacggaatgt gttgatgaaa atgaaaagaa gcaatttctg gttaaagata
     3001 tttctgaatt ggtgcgtgaa gggcaagata tagttgtaca agtagtgaaa gatccaattg
     3061 gtactaaagg agctaggctc actactgata ttacgttacc atctcgttat ttagtgttta
     3121 tgccagaaaa tagccatgtg ggagtatctc agcggattga aagtgaagaa gagcgtgctc
     3181 gtttaaaaag cttggttgag ccttattgtg atgaacttgg gggctttatt gtacgtaccg
     3241 ctgcagaaga ggcaactgaa gaaagtttaa agcaagatgt tgaattttta aaacggttgt
     3301 ggcgtaaagt attagaacga aaagggaaat attccgcaaa atcaatgctt tatggagagc
     3361 ttgcgcttgc tcaaagggta ctgcgtgatt ttattggtac acatatcaat tcggttagaa
     3421 tcgattcaaa gctaacttat gagcaagtgc gagaattttt agctgagttt atgccagaat
     3481 taacggattg tgtcaccctc tataccggtc agcaaacttt atttgatgcc tatggtgtag
     3541 aaaaggcaat ccaaaaggca ttggataaac gggttgattt aaaatcgggg ggctatttaa
     3601 ttattgagca aactgaggcg atgacgacta ttgatattaa tactggtgct tttgtcggac
     3661 atcgtaacct tgcacatacg attttcaaca caaatattga agcaatacag gcaattgcac
     3721 accagctaca gttgcgtaat ttaggtggta ttatcattat tgattttatt gatatgcaag
     3781 aggaagaaca tcgtgagcgc gttttacaat cgttacaaga ggcattaaaa ggcgatcgtg
     3841 ttaaaaccaa tgtgaatggc tttactcagc ttggcttggt ggagatgacc agaaaacgta
     3901 caagggagag tctagagcga attctttgtt gcgattgcca agcttgccaa gggcgtggca
     3961 cagtgaaaac tgtagagacg gtttgctatg aaattatgcg tgaaattgtg cgtgtacatc
     4021 atttgtttaa gacagaaaat attcacgttt atgcagctaa agatgttgct gaatatttaa
     4081 ttaacgagga aagccacgca ttattggctg agcttcaggc gtttatcggt aaaaaaattg
     4141 agattaaact tgagccatat tatcatcaag agcagtttga tgtggtcgtg atgtaatcta
     4201 ttacttggtt gaggctaaat agttagcctc aatatcgtta gttacaaaaa atttagaaaa
     4261 tctgaccgct tgtttcctat ccaaattcct caaaataacg tataatcgtc cagttttatt
     4321 tatccttttt tgaaatctaa ggtaattcaa tgtctgaagt agaaaatcaa gaattagatc
     4381 taaacggtga aatgttagcc cgccgtgaaa aattaaacaa aatccgtgag cagggtaacg
     4441 catttccaaa tacattccgt cgtgatgcgt tagccaaaga tctgcacgct caatatgatg
     4501 cagtggaagg tgaaacctta aaagaacaga atattcaagt gaaagttgcc ggtcgtatta
     4561 tgttaaaacg agtaatgggt aaggcatctt tctttaccat tcaagatgtg agcggtgcga
     4621 ttcagcttta tgtagctcgt gataacttaa gtgacagcgt ttacgaagaa aaagtcagcc
     4681 tttgggattt aggcgacatt gtgggcgtcg aaggtgcgtt atttaaaacc aaaaccggtg
     4741 aattaacggt tcgttgctct gaagttcaac ttttaaccaa gtctttacgc ccgttgccgg
     4801 ataaacatca cggtttaacg gatttagaaa ctcgttatcg tcagcgttat ttagacttga
     4861 tttctaatga agaatctcgc cgtactttta tgatccgctc gcaagtagtt tcaggcattc
     4921 gcaaattctt cttagaaaga gactttattg aagttgaaac gccaatgttg caagtgatcc
     4981 cgggcggtgc ggcagcgaaa ccgtttatca ctcatcataa tgcgttagat gtggatatgt
     5041 atctgcgtat tgctccagag ctttacttaa aacgtttagt tgtgggtggt tttgagcgag
     5101 tatttgagct taaccgtaac ttccgtaacg aaggggtttc agtacgccac aatcctgaat
     5161 ttacaatgat tgagtactac caagcctatg cggattatca cgatttaatg gataataccg
     5221 aagaactgtt acgccaatta gccttagata ttcttggcac aactgacgta ccttatggtg
     5281 attatgtatt cgatttcggt aaaccgtttg agcgtattac gatgcacgat gcgattgtga
     5341 aatatggtaa cggcattcaa cgtgaagatt tagacagctt cgagaaaagt gtggaaattg
     5401 cgaaaggctt aggcattgaa attcaaaaat cttggggttt aggctcggta gtcaatgcga
     5461 tttttgaaga agtggcagaa catcaattaa ttcagccaac tttcttgatg gctcacccgg
     5521 cagaaatttc accattagct cgccgtaatg atgaaaaccc agaggtaact gatcgttttg
     5581 agttatttat cggtggtcgt gaaattggta atggtttctc agaattaaac gatgcagaag
     5641 accaagcaga gcgttttgat gctcaagttg cggcgaaaga tgccggtgat gatgaagcaa
     5701 tgtttaaaga tgaagacttt atcgtggcat tggaacacgg tctgccgcca acagcgggtg
     5761 aaggtttagg aattgaccgc ttagtaatga ttttcgctaa cgccccatca atccgtgatg
     5821 taattttatt cccagcgatg cgtcagaagt aatcagaaat agaacaaaag cacacttcgg
     5881 tgtgcttttt tgtattacaa gcggtcaaat ttataataaa aaatgcaatt tattttgcta
     5941 atccggcttt aatcatcggt tcaaaaaagt cataatcaac caaaaaggca tcgtgtccga
     6001 aatcggagtg aaactcgtgg aactccaaat ttacgcctgc ctgttctaat ttttgtttgc
     6061 tcttatacac gtcaacttgc ttgaatagtt ggtcgcttgt taccgctaca aaagtgtagt
     6121 tggctttaat acgttttagg gcggtttctt cattttcata gccaagagcc gggtcgtata
     6181 aatctaatgc tcggagtaaa cggaggtaag tgttggcatc gaaacgacct aaaaatttcg
     6241 tgccttgata gcttaaatag gattccactt ggaaatggtc gccccaaatt tgtccttgct
     6301 gtttggtttc tcgtccaaag gctttagcaa gttgaatatc agtacggtaa gtcagcatac
     6361 cgagcatacg ggcgattttt aagccgttat caggtgcaat gccatcataa tagttcccac
     6421 cgttaaagtg tggatcgtta ataatagctt ggcgcataac gtggttaaaa ccgatagcct
     6481 cggcacttag ggtaagtgac gaacaaagat ttataatgtt gcgaacttta tcagggtaac
     6541 taatacccca ctgtgttgct tgcattccgc cgaaagatcc ccctaccact gcgtgaagtt
     6601 gagggatttc taaatagtcc aataatgctt tttgtacatt aacaatatct tgcactgtaa
     6661 taattggaaa caaactaccg taaggtttat tggttttagg gttaatcgaa gctgggccgg
     6721 ttgtgccttt acaaccgcct aatacattac tgcaaataaa gaaatattta tcggtatcaa
     6781 acgcaagccc tttgccgatg aaatcttgcc accagccttt ctcggttggt gagtcatagt
     6841 aaggcttagc atcaccggta agggcgtggc aaagcaagac cgcattgctt ttctctgcat
     6901 ttaatctgcc gtaagtctgg taagccactg tgatagggga cagttcgcct cctaatgtga
     6961 gtggtaaagg tacgtcctca aaaagggtaa tctgctgagc cataaaaatc ctgtttgcaa
     7021 aaaattctgc ttttttgacc gcttgttgta atgaccgtta aattagcggt gttcatttca
     7081 attgtcaaga atttttagac gtctaaacgt ctagattttt aaacggctaa aatcaaaatt
     7141 ttattgctga gaagatattt attacttaac aaataacatg aaatagaata aatttattga
     7201 acgattagac tattttgttt gtctctaatt tacccatctt aaatagggta gcaaaagtaa
     7261 aggatctcat ttgaaccaaa cgcgtgatag gttagaaaaa ttgccacttt tccataaaat
     7321 gcagcagttt attattaagg cattgaaaat aattgcaatt ttccccttat tgggaatagc
     7381 tatattatta gtggttgatt cacttacaag ttatattgtg agggataaaa tttatacaga
     7441 tagtaaacag attccttacc gggagtatgc agttgtactc ggtacggcaa aattttactc
     7501 taaagatgtg attaaccaat attataaata tcgtttggaa gccgctaagc aattagtcca
     7561 agaaggaaag gtcaatcagc ttttgttaag tggagataat aaaacgccgt actataatga
     7621 gccaaaaaca atgacaagtg atctacttaa aatggggatt gcgacttcaa aaattaagca
     7681 ggattatgcg gggtatacca ctttttattc aataattagg gctaaaaaag tatataaatt
     7741 accgccattt acgattatct cccaaaaatt ccactgtgaa agggcattgt ttattgcaaa
     7801 atttagggat attgatgcaa tttgttatgc cgctacatat ccagaggggg cttatcaggt
     7861 acgaatgcgg gaaattttag ccagatcggc aatggttttt agtttgttga taggtaaaga
     7921 gcctgaatca ttggaagata tccgttctaa atgagatagc cggtcagata atgttgaccg
     7981 gctattttgc ttataaaata atggttttgt ttttatatac aaatactttg tcagcaagca
     8041 ctaattctaa ggcttggcta agtacggttt tctcgacatc acgtccggca cgcatcatag
     8101 cctctgcggt gtaggtgtga tcaacattaa tcacattttg cataataatc gggccttcat
     8161 ctaattcatc attcacaaaa tgggcggttg caccgataat tttcactcca cgttcgtatg
     8221 cacgatgata aggttttgca ccaatgaaag cgggtaagaa cgagtggtga atattgacaa
     8281 ctcggtttgg ataacgagcg acaaattccg gattcagcac ccgcatatat ttagccaaca
     8341 caatataatc aggtgaatat tcatcaattt tttccgctaa taatttatcg tgttccactc
     8401 gggttaaatt ttcgtggctg actaaatgga atggaatatc gaaacgttca actaaacttt
     8461 ttaatgtttc gtggtttcca atcacggcag caatttctac atctaatcca ccatagtaat
     8521 ttttcatcag taagtcacct aaacaatgtg cttctttggt aactaaaata acgatacgtt
     8581 ttctttgttt agggagtaat ttatagcttg agccttcagg taaggtaaat tttaaatcag
     8641 tgagtaaggt ttcatcatta aaaattccgt ttaattcggt acgcataaaa aaacgtttag
     8701 tttcattctc aacaaattca gaatttttaa taatatttaa ttggtgctta tagcaaatat
     8761 tggtaatttt agcgacaagt cctgtatcat caggacattc agttaataat attttgtgtt
     8821 gttgtagcat ttcatttcct attataaaaa taagagaact caattgagtt ctctttaaac
     8881 taaaaatagt tatagccaat taaatagcaa aatcttctaa ttttttacca ctatctaaag
     8941 catcttgtaa tgcctttggt gttctgcctt gacctgtcca agttttctca ttaccgttag
     9001 catcaacaaa tttatattta gccgggcgag gtgatagtgc tttgcgggtt ttgattactt
     9061 tatctgctaa taattcagct aattcatcaa tagataaccc atcttgtttt agcatttctc
     9121 tatatttatt taaactttct agttgtttta gtttttctaa ttcttcctgt ttcatttctt
     9181 cttctttttc agcaataatt atatctaatt tctcagaaat tgattttaat tgctctaatg
     9241 ctaaatcttt agccaaagcc cttaagctgc ggatattcaa aagacttttt aaagctgaca
     9301 ttttactctc ctaaattaat gtt
//
LOCUS       DANLXO010000102         9068 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.102, whole genome shotgun sequence.
ACCESSION   DANLXO010000102 DANLXO010000000
VERSION     DANLXO010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9068
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.102"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            467..1471
                     /locus_tag="PXD69_002177"
     CDS             467..1471
                     /locus_tag="PXD69_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL6284331.1"
                     /translation="MPGDANKIISNGTSAGGALSTLLGASADHYDYEPYLKEAGALNA
                     SDKIFAVSAYCPITNLENADMAYEWQFNGVNEYSRIDMSRLNAAEFNDRSKPKPKPKI
                     EGSLNEAEIKVSNELAERFPTYLNSLHLVDEKGNPLTLDPKGNGSFKDYLSEVVKTAA
                     NKAYRGLVQDSEEQKAFQQISWLSFEKGKVSSVDWFGYVFSDKRMKSPPAFDALNGSS
                     GENNLFGTDTENNRHFTLYSAERSANKDLNLADPQIVKRMNPMHYLDNPNAAEHWRIR
                     VGTADRDTSLAISAILAIKLQMAGKNVNYETPWNVPHSGDYDVNELFLWADELVKGKK
                     "
     gene            1526..3376
                     /locus_tag="PXD69_002178"
     CDS             1526..3376
                     /locus_tag="PXD69_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL6284332.1"
                     /translation="MQVKKFSQKYINWVLKLGRLKASLLGFFMVALSAILIQSSLTYL
                     FIGRVVVVDILRSIAFGLISAPFVLYFFTLLVEKLEISRLKLEKAVRDLEELREQDAY
                     LNAKLEKNSRDKSILMATISHELRTPLNGIIGLSQILLDDKTTEKQQEYLKTINMSAT
                     ALAHIFGDIIDLEKIDSSRIELVRKEVEFEQLIHDIANFGHFMAGNKQINFEVKYPPD
                     LPKYIYIDHARLSQILWNLISNAVKFTPASGRILLEIYQLDKEQFSFAVTDSGIGIPE
                     KDQRKIFDMFYQAENSKEKKAQGSGIGLSVSKRIAKLMGGDLVVASQENQGSTFTLTV
                     QAESTETKPIFAIQQHSLKVLLVEDIEMNVVVARAMLEKIGCVVDVAMSGEETFQHFA
                     QNSYDLILLDIQLPDTTGFEIAQQLRLQYENEEIDYLPLLVALTANVIQSRQEYQAQG
                     MDDVLHKPLSLDELMRCLNQHFGDDFLQKNEEKQPLVERGSENLPYSITILNELIGVM
                     GKENVLANMDLFADLMPTYLANLQRYLSDWQTTNSVESRKLTADEAHKIKGALASVGL
                     HQLQQTAQLAQSDNGEQWEQNIAHWVEMICSKWQMDLQLAKEYVRSKGDI"
     gene            complement(3472..4026)
                     /locus_tag="PXD69_002179"
     CDS             complement(3472..4026)
                     /locus_tag="PXD69_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDL6284333.1"
                     /translation="MKSQIYYDYYPSPIGQLLLLATEEGLIYIELGQEQQTTSLDNFL
                     SAQAASGQILEIFCKTKEILDRYFAGEPLDFQQLDFLAPQGTPFQQSVWKILREIPYG
                     QTTTYGEIATQLGKPSAMRAVGGAVGRNPISILVPCHRVLGKNQALTGFGGGLPNKRF
                     LLQLEDITYKDKGIEFVKPKTKKW"
     gene            complement(4093..5574)
                     /locus_tag="PXD69_002180"
     CDS             complement(4093..5574)
                     /locus_tag="PXD69_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HDL6284334.1"
                     /translation="MKMKNFSKTLIASLVAFSSAGASAAAFQLAEISTSGLGRAYAGN
                     AAVADNASVVATNPALMTLFKQTEISAGGIFVDADVNIDGKLNATGADASHKNVIPTA
                     IVPNAYIVSPINERLSIGGGVNVNYGLISEFDPNYSAGFLGGRTSLSAVNVNFSAAYD
                     LGYGFVLGAGLNAVHAKAELGRFLGAGAARFAPAKQFLEDKKVQVQSAIQGLKALEAG
                     IAAGNTALEAQKTQVLAQVNGLLKSQNLNQTITNSAQLERLVNGIQNTNASSTIHKLK
                     GDKWALGWNVGLVYNINERNRLGFTYHSEIDLKFKGKYSNTVPVVIPKMVDTITGGAE
                     IDGTLRLRLPAFWEVSGYHKLTDKLAAQYSYKRTDWSKFQSLEAYDMQGNRLLHKTEN
                     FNDSQRIALGLSYDVNEMLTLRTGVAFDESASVTHPSISIPDTDRAWYSVGATVRFTP
                     NLSADVGYSHLRGSNLTFSEDGLATFKSKARANLYGLNVNYKF"
     gene            5922..6374
                     /gene="iscR"
                     /locus_tag="PXD69_002181"
     CDS             5922..6374
                     /gene="iscR"
                     /locus_tag="PXD69_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HDL6284335.1"
                     /translation="MKLTSKGRYAVTAILDIALHGKLEPVSLADISDRQAISLSYLEQ
                     LFAQLRRDGIVQSVRGPGGGYQLGKKPEEISVGMIISAVNENIDVTKCKGSGNCRKDS
                     QCLTHSLWERLEDQIEQFLGTISVADLAAEHADHDCEKEHCHDHPHHH"
     gene            6429..7649
                     /locus_tag="PXD69_002182"
     CDS             6429..7649
                     /locus_tag="PXD69_002182"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HDL6284336.1"
                     /translation="MKLPIYLDYAATTPMDERVAKKMMEYMTKDGIFGNPASRSHKFG
                     WEAEEAVDVARNQIADLIGADSREIVFTSGATESDNLAIKGAAHFYQTKGKHIITVKT
                     EHKAVLDTCRQLEREGFEVTYLDPEEDGILDLAKLKAAIRPDTILVSVMHVNNEMGVI
                     QPIKEIGAICRAKKIIFHVDATQSVGKIEVNVQDLNVDLMSFSSHKLYGPKGIGGLYV
                     CRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMARLTVLRDR
                     LYNGFKDIEEVYVNGSMEEGKRIGSNLNISFNFVEGESLMMSLRDIAVSSGSACTSAS
                     LEPSYVLRAIGRDDELAHSSIRFTLGRWTTEEEIDHTIEIVKKAIVKLRELSPLWEMF
                     KEGVDLSKIEWNHH"
     gene            7776..8159
                     /gene="iscU"
                     /locus_tag="PXD69_002183"
     CDS             7776..8159
                     /gene="iscU"
                     /locus_tag="PXD69_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HDL6284337.1"
                     /translation="MAYSEKVIDHYENPRNVGTFDKEASDTGTGMVGAPACGDILRLQ
                     IKVNDQGIIEDARFKAYGCGSAIASSSLITEWVKGKSLEEAGAIKNSDIAEELELPPV
                     KVHCSILAEDAIKAAIADYKEKQAK"
     gene            8268..8591
                     /gene="iscA"
                     /locus_tag="PXD69_002184"
     CDS             8268..8591
                     /gene="iscA"
                     /locus_tag="PXD69_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HDL6284338.1"
                     /translation="MSITLTEAAANRVRTFLENRGKGIGLRLGVKTSGCSGLAYVLEF
                     VDVLNEDDQVFEQHGVKVIVDEKSLTYLNGTQLDFVKEGLNEGFKYTNPNVKNECGCG
                     ESFSV"
     gene            8601..>9068
                     /gene="hscB"
                     /locus_tag="PXD69_002185"
     CDS             8601..>9068
                     /gene="hscB"
                     /locus_tag="PXD69_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HDL6284339.1"
                     /translation="MNNPFTLFDLPVQFQLDNAQLSERYLALQKQLHPDNFAHKSSAE
                     QLEAVQKSADVNEALNILKDPILRAEAMIEIHTGEAKNLEEKSMRDVDFLMQQLEWHE
                     KLETIEHRKDETELTVFLKQIKAEQKAVLEQLEQTLNTADWQKANALTDKLRYF"
BASE COUNT         2887 a         1614 c         1939 g         2628 t
ORIGIN      
        1 agacgttttt aagtttgtta tggctttatt tttttaacta tattgacagt tataaatatc
       61 atcttgtcca taaatgatca atgatcatgc aaaaatgaac caggcagacg cgatgagatg
      121 atcgacttca tcttttgata aactctttgc gatttaaaca gaaaatatat ttagaatgta
      181 aacaaacatg agtcgatttt atgttcaaag agctgtaata agacggaata atgtcagacc
      241 aagatagata ctttcaagta aaatcaagca taaaaatgat tttcagactt tacaaatctg
      301 aaagaatgtg taagatcagg attgtccgaa attcggatgg aaaatcccag tggatgtatt
      361 ggctggatac atcataataa ctatgtattt gtgaatgtta tttgaatgat tctacgtagt
      421 tgattcaaaa tcagcagtgc ggtatctgca tgctaatgat gaaaaaatgc cgggcgatgc
      481 aaataaaatt atctctaacg gcaccagtgc cggaggagca ttatctactt tgttaggagc
      541 ttcagctgat cattacgact atgagcctta tttgaaagag gcgggggcat tgaatgccag
      601 tgacaaaatt tttgcagttt ctgcctattg cccaattacc aaccttgaaa atgcggatat
      661 ggcgtatgaa tggcaattta atggtgtcaa tgaatatagc cgaatcgata tgagtcgatt
      721 aaatgcagca gagtttaacg accgctcaaa accaaaacca aagccgaaaa ttgaaggctc
      781 gttaaatgag gcggaaatta aagtttctaa tgaattagca gaacgctttc cgacttattt
      841 gaacagtttg catttggttg atgagaaagg caatccttta acacttgatc caaaaggcaa
      901 cggctcgttt aaagattatt tatctgaagt ggtaaaaacg gctgcaaata aagcctatag
      961 aggtttagtt caagatagcg aagagcaaaa agcctttcaa caaattagtt ggctttcatt
     1021 tgagaaaggc aaagtcagca gtgtggactg gtttggttat gtgttttcag ataaacggat
     1081 gaaatcacca cctgcatttg atgcgttaaa tggaagttcg ggcgagaata atttatttgg
     1141 cacagacacg gaaaataacc gccattttac gctttatagt gcggaacgtt ctgccaataa
     1201 agatctcaat ttagccgatc cgcaaatcgt gaaacggatg aacccgatgc actatttgga
     1261 taacccaaat gctgcggaac attggcggat tagggtggga acggcagata gagatacctc
     1321 gctggcaatt tctgcaatct tagcaataaa actgcaaatg gcaggcaaaa atgttaatta
     1381 tgaaaccccg tggaatgtac cccattcagg tgattatgat gtaaatgaat tattcctatg
     1441 ggctgatgag ctagtcaaag gcaaaaagta aaaaatagag taaaataaag cagatctgat
     1501 ggtctgcttt ttgttttgag gtcgtatgca agttaaaaaa tttagccaaa aatatattaa
     1561 ttgggtatta aagctagggc ggttaaaagc ttctctttta ggctttttta tggtcgctct
     1621 ttcggcaatt ttaattcaaa gtagcttaac ctatcttttt attgggcgag tagtcgtggt
     1681 ggatatttta cgctccatcg cttttggttt aatttctgcg ccttttgtgc tttatttctt
     1741 cacgttattg gtggaaaaac ttgaaatatc tcgcttgaaa ttagaaaaag cagtaagaga
     1801 tttggaagaa ctccgggaac aagatgccta tcttaacgct aaattagaaa aaaacagccg
     1861 tgataaaagc attttaatgg cgaccattag tcacgaactt cgtactcccc ttaatggaat
     1921 tatcggcttg agccaaattt tgttagatga taaaaccacc gaaaaacagc aagaatatct
     1981 aaaaactatc aatatgagtg ccactgcatt ggctcatatt tttggcgata ttattgattt
     2041 agaaaaaatt gatagtagcc gaattgaatt ggtaagaaaa gaggtggaat ttgaacaact
     2101 cattcacgat attgctaatt ttgggcattt tatggcgggc aataagcaga ttaattttga
     2161 agtgaagtat ccgcctgatt tgccgaagta tatctatatc gaccacgcac gcttgagcca
     2221 aattttatgg aatttgatca gcaatgcggt gaaatttacc cctgcaagcg gtcgaatttt
     2281 gctggaaatt taccaattag ataaagaaca gtttagcttt gcggtgacgg attcaggcat
     2341 cggtattccg gaaaaagatc aacgcaaaat ttttgatatg ttctaccaag cggaaaactc
     2401 taaagagaaa aaagcgcaag gtagcgggat tggcttatcg gtctcgaaac gcattgcgaa
     2461 gctaatgggc ggtgatttgg tggtggcaag ccaagaaaat caaggctcaa cttttaccct
     2521 cactgtgcag gcagaaagca cggaaaccaa gccgatattt gctattcagc aacattccct
     2581 taaggtgcta ttggtagaag acattgaaat gaatgtggtg gttgcccgag caatgttgga
     2641 gaaaatcggt tgcgtggttg atgtagcaat gagtggtgaa gaaacgttcc aacattttgc
     2701 acagaacagc tacgatctga ttttacttga tattcaactg ccggatacca ccggttttga
     2761 aattgcacag caattaagat tgcaatatga aaacgaggaa attgactatt taccgctgtt
     2821 ggttgctttg acggcaaatg tgatccaaag ccggcaggag taccaagcac aaggtatgga
     2881 cgatgtgcta cacaaaccgc tctctttaga tgaattaatg cgttgtctca accaacattt
     2941 tggagatgat tttttgcaaa aaaatgaaga aaaacagccg cttgtagaga gaggttctga
     3001 gaatttacct tatagcatta caattcttaa tgaattgatt ggggtaatgg ggaaagagaa
     3061 tgtgcttgcc aatatggatt tatttgctga tttaatgccc acttatttgg caaatttaca
     3121 gcgttattta agtgattggc aaaccacaaa ttctgtggaa agccgtaaat taacggcgga
     3181 cgaggctcat aagattaagg gagcattagc atcagtcgga ttacatcagc tacaacaaac
     3241 tgctcagctt gctcaatccg ataacggcga gcagtgggag caaaatattg cacactgggt
     3301 ggaaatgatt tgttccaaat ggcagatgga tttgcaatta gctaaggaat atgttagaag
     3361 caagggggac atttagtaaa tttgaaatgt tacgatggtg caagcgtcca cgcttgtacc
     3421 aattttaata tctgaagcac aagcgtggac gcttgtgcta tcaaaacgta tttaccattt
     3481 cttggttttc ggttttacaa attcaatgcc tttatcttta taggtaatat cttccagctg
     3541 taatagaaaa cgcttattcg gcaagccacc accgaatccg gttaaggctt gatttttccc
     3601 taatacccta tggcaaggca ctaaaatcga aatcgggttt cgcccaactg caccgccgac
     3661 ggctcgcatc gcacttggct tgcctagttg ggtggcaatt tcgccataag tagtagtttg
     3721 cccgtaaggg atttcacgca aaattttcca aactgattgc tggaatggag tgccttgcgg
     3781 ggcaagaaaa tccaactgct gaaaatccaa tggctcgccg gcaaaatagc ggtctaaaat
     3841 ttctttggtt ttgcaaaaaa tttctaaaat ctgaccactt gcagcttgag cggaaaggaa
     3901 attatcaagc gaggtggttt gttgctcttg ccctagctca atgtaaatca agccttcttc
     3961 tgtggctaaa agcaataatt gcccgatagg gcttgggtag taatcgtagt aaatttgaga
     4021 tttcatgttt ttatgccaat aaaaaaagag gtgtaattga ttttacacct ctttaaacct
     4081 taattcatca aattagaatt tgtagtttac gtttaaaccg taaagatttg cacgagcttt
     4141 gctcttgaat gtggctaaac cgtcttcaga gaaggtcagg ttgctaccac gaagatgtga
     4201 gtaacctaca tcagcagata ggtttggcgt gaaacgcacg gttgcaccta cagaatacca
     4261 agcacgatca gtgtccggaa ttgagattga tggatgagtt acacttgcac tttcatcaaa
     4321 tgctacacct gtacgcaatg ttagcatttc attcacatca taagacaagc ctaatgcaat
     4381 acgttgagag tcattaaagt tctcggtttt gtgcaatagg cggttacctt gcatatcata
     4441 agcttctagg ctttggaatt tgctccagtc tgtgcgttta tagctgtatt gtgcagcaag
     4501 tttatcggtt agtttgtggt aacctgacac ttcccagaat gccggtaggc gtaatcttag
     4561 tgtaccatca atctctgcac cgccggtaat ggtatctacc atcttaggaa taactacagg
     4621 aacggtatta gaatatttgc ctttaaattt aagatcaatt tcagagtggt aagtaaaacc
     4681 taaacggttt ctttcattga tattataaac caagccaaca ttccaaccca atgcccattt
     4741 atcgccttta agtttatgaa ttgttgaact tgcattggta ttttgaatgc cattaaccaa
     4801 acgttctaat tgagcagaat tcgtgatggt ttggtttaaa ttttgagatt ttaataaacc
     4861 gtttacttga gctaatactt gtgttttttg agcttcaaga gcggtattac ctgctgcgat
     4921 acctgcctca agagctttta aaccttgaat tgcactttgt acttgtactt tcttgtcttc
     4981 caaaaattgt ttagctggag caaaacgtgc cgcaccggca cctaagaaac gtcctaattc
     5041 tgcttttgcg tgtactgcat tcaaacctgc ccctaataca aaaccataac ctaaatcata
     5101 agccgcacta aaattaacat tcacagcact taatgatgta cgaccaccta agaaaccagc
     5161 agaatagtta gggtcaaatt cagatatcaa accataattt acatttacgc caccaccaat
     5221 agaaaggcgc tcattgatag gtgaaacgat ataagcattt ggaacaatag cggtaggaat
     5281 gacattttta tgtgaggcat ctgcacctgt agcattgagc tttccatcaa tatttacatc
     5341 agcatctacg aaaataccac cggcagaaat ttcggtttgt ttaaataacg tcattaacgc
     5401 agggttggtt gcaacaacag aagcgttatc ggctacagcg gcattacctg cgtaagctct
     5461 acctaaaccg gatgttgaaa tttcagctaa ttggaatgcg gcagcagatg caccggctga
     5521 gctgaatgct actaatgaag cgattaaagt tttgctaaag tttttcattt tcataggaaa
     5581 tctcttaaaa aatatatatt ttagaatgaa taattcataa aagttataag aagaaagtgc
     5641 agattttatg tgtcgaagta ctctctatca attaaatttc aactgttccg atcagttagg
     5701 agcaaataag agtgaaattg tgcggtctat gaactgttta tctttggtat tttggtattt
     5761 tcggctcttt tttcgtataa tcagcgttat tgttttaatc tgttttaata tataaaacct
     5821 tttacactaa ttagtcctaa atgattgact aaattggtgg ggtatatcaa aatttagcaa
     5881 ctgtttcaga agattttctg gataatcaat gaggatattt tatgaagctt acctcaaaag
     5941 ggcgttatgc agtaaccgcc attttagata ttgctttaca cggaaaacta gagccggtta
     6001 gcttagccga tatttcagat cgccaagcga tttcactgtc ttatttagag caactgtttg
     6061 ctcaacttcg ccgtgacggt atcgtgcaga gcgttcgtgg accgggtggt gggtatcaat
     6121 taggtaaaaa accggaagag attagcgtgg gtatgatcat ctccgccgtg aatgaaaata
     6181 ttgatgtcac caaatgtaaa ggtagtggta attgccgtaa agattctcag tgtttaacgc
     6241 attctttgtg ggagcggtta gaagatcaaa ttgagcagtt tttagggaca atttcagttg
     6301 cggatttagc cgcagaacac gctgatcacg attgtgaaaa agagcattgt cacgatcatc
     6361 ctcatcatca ctaattgcaa attttttatc aaaaatgacc gcttgggttg ttttaactag
     6421 gagtaacaat gaaattacca atttatttgg attacgcagc aaccacacca atggacgaac
     6481 gtgttgcgaa aaaaatgatg gaatatatga ccaaagacgg tatctttggt aaccctgctt
     6541 ctcgctcaca caaatttggt tgggaagcgg aagaagcggt tgatgtggct cgtaaccaaa
     6601 ttgccgattt aatcggtgca gacagccgtg aaatcgtttt cacttctggt gcaacagagt
     6661 cggataactt agccatcaaa ggtgcggctc atttctatca aaccaaaggt aaacacatta
     6721 tcactgttaa aaccgaacat aaagcagtat tagatacttg ccgtcagtta gagcgtgaag
     6781 gttttgaagt gacttactta gaccctgaag aagacggtat tttagattta gctaaattaa
     6841 aagcggctat tcgtccggac acaattttag tttcggtaat gcacgtaaat aacgaaatgg
     6901 gcgtaatcca accgattaaa gagatcggtg caatctgccg tgcgaagaaa atcattttcc
     6961 acgttgatgc gacccagtct gttggtaaaa tcgaagtgaa tgtacaagac ttaaatgttg
     7021 atttaatgtc tttctcaagc cacaaattat acggaccaaa aggtatcggc ggtctatatg
     7081 tttgtcgtaa accacgtgtg cgtttagaag caattattca cggtggcggt cacgagcgtg
     7141 gtatgcgttc gggtacattg cctgttcacc aaattgtagg tatgggtgaa gcatatcgta
     7201 tcgctaaaga agaaatggca acggaaatgg ctcgtttaac cgtgttacgt gatcgtttat
     7261 ataacggctt taaagatatt gaagaagtat atgtaaacgg ttcaatggaa gaaggcaaac
     7321 gtatcggttc aaacctaaac atcagcttta actttgttga gggcgaatcg ttaatgatgt
     7381 cattacgtga tatcgcagta tcatcaggtt cagcttgtac ttctgcaagt ttagagccat
     7441 cttatgtgtt acgtgcaatc ggtcgtgacg atgaattagc tcacagctca atccgtttca
     7501 ctttaggtcg ttggacgact gaagaagaaa tcgatcatac tattgaaatc gtgaaaaaag
     7561 ctatcgtgaa attgcgtgag ctttcgcctc tttgggaaat gttcaaagaa ggtgtagatt
     7621 tgtctaaaat cgaatggaat caccactaat tcagaaaaat tttgcaaggg caaataatat
     7681 ttgcccctac aaaataagct ttcatcacaa atagtaaatt gaatgtaggg gcgaaatagg
     7741 tttcgccgga aataggaaat aaaaggaata caaaaatggc atatagcgaa aaagtaattg
     7801 atcattacga aaacccacgc aacgtaggga cttttgataa agaagcatca gacaccggta
     7861 caggtatggt gggagcaccg gcttgtggtg atattttacg tttacaaatt aaagtgaacg
     7921 atcaaggtat cattgaagat gcacgcttta aagcatacgg ttgtggttct gcaatcgcat
     7981 caagttctct cattaccgaa tgggtaaaag gtaaatcatt agaggaagca ggtgcgatta
     8041 aaaacagtga tatcgctgaa gagttagaat taccaccggt aaaagttcac tgttcaatct
     8101 tagcagaaga tgcaatcaaa gctgcaattg cagactacaa agagaaacaa gctaagtaat
     8161 atgatacaat caatgcaagc ggtcgatttt tgcaaaaaat ttgcaaaatt taaccgcttg
     8221 catttgctat ttctatcttg atttaatcca ttcacataag gaaaactatg agcattacct
     8281 taacagaagc tgccgcaaac cgagttcgta cattcttaga aaacagaggt aaaggtatcg
     8341 ggctaaggct tggtgtgaaa acttccggtt gttcggggct tgcctatgtg cttgaatttg
     8401 ttgatgtatt aaatgaagac gatcaggttt tcgaacaaca cggcgtaaaa gttattgtcg
     8461 atgaaaaaag cctgacttac ttaaacggta cgcagctgga ttttgtgaaa gaaggcttaa
     8521 acgaaggctt taaatacacc aacccgaatg ttaaaaacga atgcggctgt ggcgaaagtt
     8581 ttagtgtgta aggaactgta atgaataacc cttttacttt atttgattta cccgttcaat
     8641 ttcaacttga taacgcccag ctttctgagc gttatcttgc tttacagaaa cagcttcacc
     8701 cagataactt tgcccacaaa tcaagtgctg aacagttaga agcggtgcaa aaatctgctg
     8761 atgtcaatga ggcactcaat attcttaaag atccgatttt acgggcagaa gcgatgattg
     8821 aaatccatac aggtgaagcc aaaaatctcg aagaaaaaag tatgcgagat gtggatttct
     8881 taatgcagca actcgaatgg cacgaaaaac tggaaaccat tgagcatcgt aaagacgaaa
     8941 ccgaactgac cgtcttttta aaacagatta aagcggaaca aaaagcagta ttagaacagc
     9001 ttgaacaaac gttaaataca gccgactggc aaaaagccaa tgcgttaacc gacaagctcc
     9061 gttacttt
//
LOCUS       DANLXO010000103         8888 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.103, whole genome shotgun sequence.
ACCESSION   DANLXO010000103 DANLXO010000000
VERSION     DANLXO010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8888
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.103"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            58..327
                     /locus_tag="PXD69_002186"
     CDS             58..327
                     /locus_tag="PXD69_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL6284340.1"
                     /translation="MKIMAVCGSGLGSSFMMEMNIKKVLAKLGVEAEVSHTDLSSVVA
                     DDADLFVMAKDIAASSNVPKEKLIVVKNIVGLAEFEEKLTAYFNQ"
     gene            340..1690
                     /locus_tag="PXD69_002187"
                     /pseudo
     CDS             340..1690
                     /locus_tag="PXD69_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013745980.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
     gene            complement(1785..2933)
                     /gene="dprA"
                     /locus_tag="PXD69_002188"
     CDS             complement(1785..2933)
                     /gene="dprA"
                     /locus_tag="PXD69_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDL6284341.1"
                     /translation="MAYHYDLLRLLQVPQMGAQRIGRLLAELNFAEFCHYDKLQLKQI
                     GWNEKQIQRWFNPDQKWIDQAMTWSELPNQQIVTLFDENYPFLLKQISTAPPLIYVKG
                     NVESLSLPQIAIVGSRDYSHYGEYWAGQFAAELARHNIIITSGLAIGIDGFAHQKIVM
                     EQGITIAVLGSGLNQVYPARHKKLAEQIVDLGGALVSEFSPNQPPVAENFPRRNRIIS
                     GLSLGTLVIEATLNSGSLITARYALEQGREVFALPNAVQNPYAQGCHKLIKEGALLVE
                     GVEDILEVVASQYQPQQIPLFDESKPTVSTSLQAVKNSEKFAKNLPSLTACQQQIYQH
                     ISLEPMAIDDLAKVTELTIEILLVELLGLELAGVIKQVSGGYVMDNGY"
     gene            3022..3534
                     /gene="def"
                     /locus_tag="PXD69_002189"
     CDS             3022..3534
                     /gene="def"
                     /locus_tag="PXD69_002189"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDL6284342.1"
                     /translation="MAILDVVLYPDEKLATVCEPVEQVDEALNRFIDDMFETMYEHEG
                     IGLAAPQVGVLKRVITIDIEGDKTNQVVLINPEILESSGETGIEEGCLSIPGHRALVP
                     RKEKVKVKALNRQGEEIIIDADDLFAICIQHEIDHLNGVLFVDHISNLKRQRIKEKMQ
                     KLKKQIARAK"
     gene            3628..4554
                     /gene="rfaD"
                     /locus_tag="PXD69_002190"
     CDS             3628..4554
                     /gene="rfaD"
                     /locus_tag="PXD69_002190"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDL6284343.1"
                     /translation="MIIVTGGAGMIGSNIVKALNEIGRKDILVVDNLKNGEKFINLVD
                     LDIADYCDKEDFIASIIAGDDFGEIDAVFHQGACSATTEWDGKYLMQNNYEYSKELLH
                     FCLDRQIPFFYASSAATYGGRSDNFIEKREFEGPLNAYGYSKFLFDEYVRRILPEAES
                     PVCGFKYFNVYGPREQHKGSMASVAFHLNNQMLKGENPKLFAGSEQFLRDFVYVEDVA
                     KVNLWAWQNSISGIFNLGTGKAESFQEVANAVIKYHGKGEIETIPFPDHLKSRYQTFT
                     QADLTNLRAAGYTGTFKTVAEGTAEYMAWLNR"
     gene            complement(4622..5152)
                     /gene="fabA"
                     /locus_tag="PXD69_002191"
     CDS             complement(4622..5152)
                     /gene="fabA"
                     /locus_tag="PXD69_002191"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HDL6284344.1"
                     /translation="MNSCTPIIKPSYTYEELLLSGKGELFGEKGPQLPAPPMLMMDRI
                     IEMNQEKGNFEKGYIEAEFDIKPDLWFFNCHFINDPVMPGCLGLDAMWQLVGFYLGWI
                     GGEGKGRALGVGEVKFTGQILPTAKKVTYRIHMKRVVNRKLVMGVADGEVEVDGRVIY
                     TATDLKVGLFQDTTAF"
     gene            complement(5265..6902)
                     /locus_tag="PXD69_002192"
     CDS             complement(5265..6902)
                     /locus_tag="PXD69_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6284345.1"
                     /translation="MTLSLLSSQKLVMQNDFSRLDEKLNFLDFQPQAKQALNQFLQSQ
                     FGALLVLKSELFPEFINEITEYLKKYSVDLPIISKMDFNKNSLFGYSVFLERELKTEY
                     VKGAIHEADKGILIVNIRSLLLDITQWDKLKQALLFGEYEPNSVNHSPYLSAKEKSTF
                     KLILVGEREDISTLSAYDDGLYQFGQYTEIKSYLSLSDNVEQWGGYVQNYAENLINKR
                     LTSTALNQFLQAYIRESESRELVSISPTLLRKHLLGIQNFYPNVTEIDEVKGYFDYLE
                     QQSSILNQYTVGDILTNQLYIETEGEEIGQINGLSVIEFEGIPHSFGEPLRMSCNVQY
                     GDGEITDIERKVELGGNIHSKGIIIAQSCLANLLELPTQLPFSASIAFEQSYGEIDGD
                     SSSLAIFNVLVSALAKVGLPQSIAVTGAIDQFGNVLSVGGVNQKIEGFFNICHARQLT
                     GKQGVIIPAACVSHLSLSSEVVEAVEQGLFKIWTVENVFDAIAILFERDFYDDEKAPN
                     SAQTALFTLIHQNLDERESEETSGSFLSKICKKIKLD"
     gene            6995..7441
                     /gene="matP"
                     /locus_tag="PXD69_002193"
     CDS             6995..7441
                     /gene="matP"
                     /locus_tag="PXD69_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HDL6284346.1"
                     /translation="MRYQKLITQETTWKWQYLLKKHREGENITKYEEQSLIDLKVQFL
                     STLQNSPDEVEKWIKSEMTPEQRKKMRQSVRAKRKRFFNAEKQTTKKKSIDLEYSSWL
                     RLSKYAKSQKLTLSEAIVKLTDELENKQLYLEQVAKMKSSLKDLLK"
     gene            complement(7507..8643)
                     /gene="ompA"
                     /locus_tag="PXD69_002194"
     CDS             complement(7507..8643)
                     /gene="ompA"
                     /locus_tag="PXD69_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_119863613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HDL6284347.1"
                     /translation="MKKTLVALAVLSAAAVAQAAPQANTFYAGAKAGWASFHDGLTQF
                     DNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNNFGLATELGYDYFGRVRGNTT
                     FSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVDKDSR
                     IKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIPRGTNFQ
                     YSPDIHSVSAGLSYRFGQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDA
                     AHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAV
                     GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQVQGSKEVTM"
BASE COUNT         2695 a         1819 c         1677 g         2697 t
ORIGIN      
        1 tatttctata gttcaaaatt cagacaacta ttcattcacc tttaatggag atttactatg
       61 aaaattatgg cagtatgtgg ttccggctta ggtagcagct ttatgatgga aatgaacatt
      121 aaaaaagtat tggcaaaact cggtgtcgaa gcggaagtga gtcataccga cctttcctct
      181 gttgttgctg atgatgctga tttatttgtg atggcaaaag atattgccgc aagcagcaat
      241 gtgccgaaag aaaaactcat cgtggtaaaa aacattgttg gattagcaga attcgaagaa
      301 aaattgaccg cttactttaa ccaataacgg agatgttata tggaatcgct actctttttt
      361 atattagata ttctcaaagt gccttccgtt ctagtgggtt taattgctct ggtcggttta
      421 gttgcacaga aaaaatcggt atccgatatt gttaaaggaa caatcaaaac tattttaggc
      481 ttcttagtgt taagcggtgg tgcaacagta cttttaagct ccctgactcc tttaggcggt
      541 atgtttgaac acgccttcaa cgtgcaaggc attatcccta ataacgaagc gattgtgtct
      601 atggcaatcg aaaaatatgg tacggcgact gcgttaatta tggcattcgg tatggtagcc
      661 aatattttaa ttgcacgttt tacccgccta aaattcattt tcttaaccgg acaccatacc
      721 ttctatatgg cgtgtatgat cggcgtaatc ctaaccgttg ccggctttga aggtattcag
      781 ctcgtctttg tcggggcatt aaccttaggg ttaattatgt ttcccgacta tcgctcactt
      841 ctatatgaaa aaagtgaccg ctagcaatga tgttgcctta ggtcatttcg gcacattggg
      901 ctacgtgctt gctggttcaa tcgggcaact ggtaggaaaa ggctctaaat ctaccgaaga
      961 aatggattta cctaaaaacc tcggcttctt acgtgatagc tccatttcta tttcactcac
     1021 gatgatggcg atttactata ttctcgccct tgcttcgggc agtgaatacg tttctacatt
     1081 aagcggcgga caacattatt tagtgtatgc caccattcaa gccatcactt ttgcagccgg
     1141 tgtttatgtc attttgcaag gggttcgttt aattttagcc gagatcgtcc cggcatttac
     1201 cggcttctcc gaaaaattag tacctgatgc caaaccggct ctcgactgcc cgattgtttt
     1261 cccttacgcc cccaatgcgg tattagttgg atttcttgcc agtttcttag gtgggatttt
     1321 aagcttagcc attctagggc aacttaattg ggtgttaatt ttaccgggcg tagtgccaca
     1381 cttcttctgt ggggcaactg ccggcgtatt tgggaacgcc accggcgggc gtcgtggtgc
     1441 aattatcggt gcttttattc acggcatatt aattaccttc ttgcctgtat tcttattacc
     1501 tgtactgggt tcattaggct ttgctaacac cactttctct gactcagact tcggcggtat
     1561 tgggattgtg ttaggctata tggctcaata cttcgacaag aatatcatta cgctcattat
     1621 tgtcggctta ttcgctctgt tggtagccta taattatttg gcgaaaaaac cggcaaaact
     1681 gaatacctaa ttaaaatcag gtgttatttg ctgcctgcga ggaatcttcc ctgccatttc
     1741 ttgatggtag ggaattttgt ttagttaaac gacaacgctc ttgttcaata cccattatcc
     1801 atcacatacc ccccactcac ttgtttaatc acaccggcta attccagacc cagtaattca
     1861 accagcaata tttcaatcgt caactccgta actttggcta aatcatcaat tgccatcggc
     1921 tctaagctga tatgctgata aatttgctgc tggcaagcgg tcagacttgg cagatttttt
     1981 gcgaattttt cgctgttttt gaccgcttgt aaagatgtgc ttactgttgg cttagactca
     2041 tcaaacaaag ggatttgctg aggttgatat tgcgaggcga ccacctctaa aatatcttcc
     2101 acaccttcca cgagcaatgc cccttcttta attagcttgt ggcaaccttg tgcgtaaggg
     2161 ttttgtaccg cattcggtaa cgcaaacact tccctacctt gttcaagggc ataacgagcg
     2221 gtaatcagtg aaccactatt aagcgttgct tcaataacta aagtgccgag cgataagcca
     2281 ctaataattc gattacgacg aggaaaattt tctgccaccg gcggctgatt aggcgagaac
     2341 tccgacacca atgcaccacc taaatcaaca atttgttcgg ctaatttttt atggcgagca
     2401 ggatagactt gatttaatcc actccctaac acggcaatcg ttatgccttg ttccataacg
     2461 attttttgat gggcaaaacc gtcaatacca atggctaaac cgctggtaat gataatatta
     2521 tggcgagcta attcggcagc aaattgccca gcccaatatt caccataatg agaatagtct
     2581 cggctgccaa caatcgcaat ttgtggcaga gaaaggcttt ccacatttcc ctttacataa
     2641 attaacggtg gcgcagtcga aatttgtttt aagagaaacg gataattttc atcaaagagt
     2701 gtcacaattt gctgatttgg caattctgac caagtcatcg cctgatcaat ccacttttga
     2761 tcaggattaa accaacgttg aatttgcttt tcattccaac ctatttgttt gagttgaagt
     2821 ttgtcatagt ggcaaaattc agcaaaattg agttccgcca ataatcgccc tatacgttga
     2881 gcccccattt gcggcacttg taataatcgt aataaatcgt agtgatatgc catattttca
     2941 tcctcaaaat ttccctaata ataagaaaag gtttaaaata gccaaacgaa ttttttaaac
     3001 ttttcgagag agatcacaaa aatggcaata ttagatgttg tgctttaccc cgatgagaaa
     3061 ctggcaaccg tttgtgaacc ggtggaacag gtggacgaag cactgaatcg ttttatcgat
     3121 gatatgtttg agacaatgta cgaacacgaa ggtattggct tagctgcacc gcaagtgggc
     3181 gtacttaagc gtgttattac tattgatatt gagggcgaca aaaccaatca agtggtgtta
     3241 attaaccctg aaattttaga aagcagcggt gaaaccggca ttgaagaggg ctgtctctcc
     3301 attcccgggc atcgtgcctt agtgccacgc aaagagaaag tgaaagtcaa agcccttaac
     3361 cgccaaggcg aagaaattat catcgatgcc gatgatttat ttgcgatttg tattcaacac
     3421 gaaatcgacc atttaaacgg cgtgcttttt gttgaccaca tatccaattt aaaacgccaa
     3481 cgcatcaaag aaaaaatgca aaaattgaaa aagcaaattg cacgagcgaa ataaccaggc
     3541 acaagcggtt aaaatggctt aaaaatttgc aaattaagtg tgatgacacg ataataacca
     3601 cagttcaact ttagaaagga taaaaatatg attatcgtca ccggcggcgc aggtatgatt
     3661 ggcagtaaca ttgttaaagc cttaaatgaa atcggtcgca aagatatttt agtagtagat
     3721 aacctcaaaa acggggaaaa atttatcaac ttagtggact tagatattgc ggattattgc
     3781 gataaagagg atttcatcgc ctctattatc gccggcgatg attttggtga gattgatgcg
     3841 gttttccatc aaggggcttg ctcggcaacc accgaatggg acggcaaata cttaatgcaa
     3901 aataactacg aatattcaaa agagttattg catttttgct tagatcgcca aattcctttc
     3961 ttctatgcct caagtgcggc aacctatggc ggacgttcgg ataattttat cgagaaacgg
     4021 gagtttgaag gtccattaaa tgcttatggc tactccaaat tcctgtttga tgaatatgtc
     4081 cgccgtattt tgcctgaggc agaatcaccg gtctgtggtt tcaaatattt caacgtatac
     4141 gggcctcgtg agcaacacaa aggttcaatg gcaagcgtgg cattccactt aaacaaccag
     4201 atgttaaaag gggaaaatcc aaaactattt gccggctcag agcagttctt gcgtgatttt
     4261 gtttatgtgg aagatgtggc aaaagtgaat ctttgggcgt ggcaaaacag catttctggc
     4321 attttcaacc tcggcaccgg aaaagcggaa tctttccaag aagttgcgaa tgcggttatc
     4381 aaataccacg gcaaaggcga aattgaaacc atcccattcc cggatcattt aaaatcccgc
     4441 taccaaacgt tcactcaagc ggacttaacc aacctaagag ccgctggcta cacaggcaca
     4501 tttaaaaccg ttgctgaagg aacagcggaa tatatggcgt ggttgaatcg ctaatcaaac
     4561 gttgttaaaa aagcagaaag agctacgaaa tgtagctctt tttgttataa ggttataagg
     4621 attagaatgc tgtcgtatct tggaataagc ctacttttaa atcagtagca gtatagatca
     4681 ctcgcccgtc cacttcgact tcaccatcag caacccccat cactaactta cgattgacca
     4741 cacgtttcat atggatacgg taagtaactt ttttcgctgt cggtaaaatt tgtccggtga
     4801 attttacttc acctacgccc aatgcacgcc ctttgccttc gccaccaatc cagccgagat
     4861 aaaaaccaac cagttgccac atcgcatcta agcctaagca acccggcatt acaggatcgt
     4921 taataaaatg gcagttaaaa aaccataaat ccggtttaat atcaaactca gcttcaatat
     4981 accctttttc aaaattgcct ttttcttggt tcatttcaat gatgcgatcc atcattaaca
     5041 tcggtggagc cggcaattga ggcccttttt caccgaataa ttctcctttt cctgatagca
     5101 aaagctcttc gtaagtatag cttggtttga taattggtgt acaactgttc attattttta
     5161 aaatcctgta aagtgaaaaa agcctgttat atcaataact gataaatcag gctgatagta
     5221 acagactttt aattcagtga acagttgtaa gctgacttgt cggatcagtc tagctttatc
     5281 tttttgcaaa ttttgcttaa aaatgaaccg cttgtttctt cactttcccg ctcatctaga
     5341 ttctggtgaa tcaaggtaaa taatgctgtt tgggctgagt taggggcttt ctcatcatca
     5401 taaaaatccc gctcaaacag aatcgctatg gcatcaaaca cattttccac cgtccaaatt
     5461 ttaaatagac cttgctccac tgcctcaaca acttctgaac ttaaactcaa atggctaaca
     5521 caggccgccg gaataatcac accttgtttc cccgttaatt ggcgagcgtg acaaatatta
     5581 aagaagcctt caattttctg atttaccccg cccacgctta gcacattccc aaattgatcg
     5641 atagcacctg tcaccgcaat agattgtggc aagccaactt tagctaaggc actcactagt
     5701 acattgaaaa tcgcaagaga agaactatcc ccatcaattt caccatagga ttgttcaaaa
     5761 gcaatcgaag ctgaaaacgg taactgggtt ggtagttcta acagattcgc taaacaagat
     5821 tgagcgataa taataccttt ggagtggata tttcccccta gctccacttt acgctcaata
     5881 tctgtaattt cgccatcacc atattgtaca ttacaactca tgcgtaaggg ctcgccaaaa
     5941 ctatgcggaa tgccttcaaa ctcaatgacc gataagccat tgatctgccc aatttcctct
     6001 ccttcggttt caatataaag ttgattagtc agaatatcac ccaccgtata ttgatttaat
     6061 atcgatgatt gctgttctaa ataatcaaaa taacctttta cctcgtcaat ttcggtcaca
     6121 tttgggtaaa aattttgaat tcctaataaa tgttttctca ataatgtagg ggaaatagac
     6181 accaactctc ggctttcact ttcacgtata taggcctgta aaaattgatt aagcgctgtg
     6241 gaagttaatc gcttattgat gagattctca gcataattct gaacataacc tccccactgc
     6301 tccacattat ccgataatga taagtaggat tttatttcgg tatattgccc aaattggtac
     6361 aacccatcat cataagcaga taaagtagaa atatcttctc tttcccctac taaaatcaat
     6421 ttaaatgttg atttctcttt agccgataaa tagggtgagt gattaacaga atttggctca
     6481 tattcaccaa ataataatgc ctgttttagc ttatcccatt gggtaatatc caataagagc
     6541 gaacggatat taacaattaa aattccctta tctgcctcgt gaattgcacc tttaacatat
     6601 tctgttttca gctctctttc caaaaacaca gaataaccaa atagactatt tttattgaaa
     6661 tccattttgc taataatcgg cagatctaca ctatattttt tcagatattc cgtgatttca
     6721 ttgataaatt ccggaaaaag ctcagatttt aagactaata aagcaccaaa ctgagattgt
     6781 aaaaattgat ttaacgcttg ttttgcttga ggttgaaaat ctaaaaaatt caatttctca
     6841 tctaaacgag agaaatcatt ttgcattact aatttttggc tactaagtaa agaaagggtc
     6901 acaaatctgc ctcattattg aaaatttggt ttattataca aaattccgct atacttgcta
     6961 aatatagctt actttttcct atcatattca gattatgcga tatcagaaac tcatcaccca
     7021 agaaacaact tggaaatggc aatatctcct aaaaaaacat cgtgaaggag aaaatattac
     7081 taagtacgaa gaacaaagct tgatcgattt aaaagttcag ttcctctcta ctttgcaaaa
     7141 ctctccggac gaagtggaaa aatggattaa gtcggaaatg acgcctgagc aacgtaagaa
     7201 aatgcgtcaa tcagtacgcg ccaaacgcaa acgcttcttt aatgctgaaa agcaaacaac
     7261 caagaaaaaa tccattgatt tagagtattc gagctggtta aggctctcta aatatgccaa
     7321 aagccaaaaa ctaacgcttt ctgaagctat tgtcaaatta accgatgaac tcgaaaataa
     7381 acaactttac ttagagcaag ttgctaaaat gaaatcaagt ttaaaagatt tactgaaata
     7441 aaaaaagaaa aaagcccact aacaagcggg ctttttttga ttcaattttt caactgaata
     7501 actatattac atagttactt cttttgaacc ttgaacttgg atttcaacac gacgatctgg
     7561 tgctaagcaa gcgattaatg ctttacgacc tttaactgca tcacatgtgt gaccagttac
     7621 tgggtttgct tcaccgtaac ctacagctgt tacattagct gggttagtac ctttagaaac
     7681 gatgtaatta gctactgttt cagcacgacg ttgtgaaagt tttaagttag atgcttcttt
     7741 accgatgcgg tctgtgtaac cattaacttg gatagctagg tttgctaagc ctaagttgct
     7801 gatttcagcg tgtgctgcat ctaaagaagt tgctgctgct ggttttaagc ttgatttacc
     7861 gaaatcaaat aaaacatcag agctgaatgc gaagttttta gttacaactt ctggtgcttc
     7921 aactggtgct gcaccttgac cgaaacggta tgataaacct gcagatactg agtggatatc
     7981 tgggctgtat tggaaatttg tacctcttgg tattagataa ccaactgttg tacgaactgc
     8041 cttatctaag ttaccaacac gatttaagta ttgatattca acacgagcag ctaattcagg
     8101 agtaattgca tactcaagac cagcacctaa taatagagat ggttttaagt tgtgaacttt
     8161 aatgcgtgaa tctttatcta catgttgttg tacgtagtaa tcgttgcgaa ctaatgcaac
     8221 acctacttta ccgtaaacat ctaagttagg aacaacttcg tagcttggtt ttaagcttaa
     8281 gtgcgcaccg tgagctgaat gtttagccgc agttttttct ttatcatcac cagaaaatgt
     8341 agtgttacca cgaacacgac caaagtagtc ataacctaat tctgtcgcta aaccaaagtt
     8401 gttttggttt aagatttggt aaccaccgaa tacaccgtaa gttacagagt tacggttaat
     8461 accgaggtta ataccgaggt taataccgga tccataatca tatgtgttgt caaattgagt
     8521 taaaccgtcg tggaatgatg cccaaccagc tttagcacct gcgtagaaag tgttagcttg
     8581 tggagctgct tgagctactg cagctgctga taatactgct aatgcaacta atgttttttt
     8641 cattttgatg atcctcttaa atattgtcat cgattaaaat aaattcttaa tacccacaaa
     8701 aagtattaaa actttaactt tatgcttcaa cattataata agaagcaaga tagctaatgt
     8761 cagaagctat tatacaaaga tttatctaaa aacagatttt ttgtataaaa tttatcttct
     8821 gaataacatt cttgttctaa tttagattga gcaagaatat tgtcattatg tggtttcatt
     8881 ttcgaaaa
//
LOCUS       DANLXO010000104         8800 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.104, whole genome shotgun sequence.
ACCESSION   DANLXO010000104 DANLXO010000000
VERSION     DANLXO010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8800
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.104"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(50..823)
                     /locus_tag="PXD69_002195"
     CDS             complement(50..823)
                     /locus_tag="PXD69_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL6284348.1"
                     /translation="MNLSNALKLIKYNELDVLEVNHNKFKAKIALQGAQLLSWQPYNA
                     EQDVLWLSEIEPFRIGSAIRGGIPICYPWFGSIKEPAHGTARIQEWRLVEHTCSDENV
                     GLVFALENKAKMEMMLGETCELYFTHLDPEPAQLALHSYFNIGDIEKVEVQGLPTRCF
                     DKLTDQEVEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETVLWNPWH
                     NTVSAMTETAYQNMVCVETARINTLLQQNETLGVRVLVR"
     gene            972..5168
                     /locus_tag="PXD69_002196"
     CDS             972..5168
                     /locus_tag="PXD69_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6284349.1"
                     /translation="MKTKTFTRSYLASFVTIVLSLPAVASVVRNDVDYQYFRDFAENK
                     GPFSVGSMNIDIKDNNGQLVGTMLHNLPMVDFSAMVRGGYSTLIAPQYLVSVAHNTGY
                     KNVQFGAAGYNPDSHHYTYKIVDRNDYEKVQGGLHPDYHTPRLNKLVTEVVPAAVTNA
                     GTSIKPYLNEERFPMFLRAGSGTQALRGKESNKTTGIAGAYEYLTGGTTLQLSKSSPD
                     HWLDYSSNLYQVSYGPLSTYALPGDSGSGSYAYDMNEKRWVLVGVLNFYNGMDNQFNR
                     SAIIRKDFHEKKFAEDIAGTINNTVQNAQFNWTAQGKSSSLSQSNNVQKLNVDLKDSS
                     IANQNTSLPQENHGKTINFNGKDATIVLKQDIDQGAGALNLNANLTIRPETDQTWQGA
                     GIIVGKDKKVNWQVKNPQGDRLSKLGEGTLYVNGRGQNLGDISVGDGIVILNQQADHQ
                     GRKQAFNTVGIVSGRPTVVLGSADQVNPDNIYFGFRGGRLDLNGNSIAFKRIQNSDKH
                     ARIVNHNRDHISTLIIQGQDPLTSNDLIWGKWASNSPADIYEYTNPYQNKRKDYFRLK
                     GNSRVYYPTNATSNDHWEFLSSNREQAIQKILDAKNLRQRYDTFNGFIGEDASNKTNG
                     ILNVVFDTKTEVNTEQDKLKNIYTMSGGFNLNGELTLKGGTLLLSGHPTPHAYDIKNK
                     HDVVRENDWQDSHFTAKNITVNKMAQLYIGRNVNEVNSHFTATDKAKLNLGFINRSTP
                     SCYDSEYTGTTHCEVQAVISDNIFANLATTAIKGNVKLQNHSQLNLGKANLTGSVQAD
                     QTTHITLANHSHWLNNGTSQIGHLTMEKGSILSLNDKFATTEIPVRFNKMIIQGNLKG
                     NGRINYTANLAKGESDHLQVDGIAEGNFVLAVRNSTTEANPKSSLNLLSLKNSNQEGN
                     KASISLENNYVDLGTYRYVLENRNHNYHLFNPLIPNSTSKEMNATSVSSIPKKESVTN
                     VPTLDKKETEQNLTQLQKDFSAHQLENQKAKQSMINAQSELRRLNSQLNVLQKYVNSR
                     RLGYYTQQAVLEQISIIQNKIKQTQTIFNDANATVKLTDQKLEEAKLALGSVNDLVLI
                     KASAPAMQATNQDTSMMNIIQADWISQYANTALSELSAQANSALQISNSLDRQLFKQS
                     DKFNVWSSVEHQKTEHKSDLYRPYKQQTNLTQLGIQMPIDNGLMFGVALSKNHANAEF
                     NEGVNGKSNLLMASLYGKWQSQQGTFISLDGSYGKAKNQLYLFGENHFTRRISSIGAN
                     IGHQFDLAGVQIQPTIGARYYHFSGQDYTLGGAKISSPNTHFMTYQAGLKASKTFSLD
                     DWKVEPSITTHYVDASNKRLAVNVNNNNINQRFGRYLKTEAGIRFEHNQWQFDLHAGF
                     INGNEIKKQHFAGVKLGYSW"
     gene            complement(5223..6317)
                     /gene="mobA"
                     /locus_tag="PXD69_002197"
     CDS             complement(5223..6317)
                     /gene="mobA"
                     /locus_tag="PXD69_002197"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL6284350.1"
                     /translation="MSKTIEERISAVILAGGLARRMNGVEKGLQLFEGKPLISHILAR
                     LSPQVSDIWLNVNRSIEQYQQLYPAFSYYQDSLPDFQGPLSGMLAGFEQIESDYLLFV
                     PCDTPFMPELLLQKLKTALRINNVQIAYAHDGERPHPTFALIHRSVQEDLKAYLGSNQ
                     QQLLAFFQSQKSVAVDFSEQKSAFTNVNTLEDLSRVSQFPVKNLAITGYSGTGKTTLL
                     EKLIPKLTACGIRVGLIKHSHHNVDVDKKGKDSYRLREAGANPTMIVCDERWALMTET
                     KQAVEFSQLIAKFNPQEVDLVFVEGFKHETLPKIQLHRKGIEKPLPELDQWTIATATD
                     YPLERENWLDINNIGGIADFIKNWLENKAS"
     gene            6404..6673
                     /locus_tag="PXD69_002198"
     CDS             6404..6673
                     /locus_tag="PXD69_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1040 family protein"
                     /protein_id="HDL6284351.1"
                     /translation="MKCERLEELLELLGEHWRKNPDLHLIDILQQLSVEVGEPDNFKA
                     LSDEVLIYQLKMRNAGKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            6737..7375
                     /locus_tag="PXD69_002199"
     CDS             6737..7375
                     /locus_tag="PXD69_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL6284352.1"
                     /translation="MKKLALKTAFVALSALFTFNSTAIAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELSYKIPSQIKEKLPSDSKLVQYHVNFLGRQSEDLTRAWAL
                     AMALGAEDKVKTALFEGAQKDAFKSMDDIRSVFLANGITAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFADSSSTNDFIKRYVDAVVFLSKK"
     gene            7459..8235
                     /locus_tag="PXD69_002200"
     CDS             7459..8235
                     /locus_tag="PXD69_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL6284353.1"
                     /translation="MTKLSILNLVPIREGQTAKQAVDSMVKLAKHAESIGIERYWIAE
                     HHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLPNHSPYIVAEQYGTLETLYPNRV
                     ELGLGRAPGTDMRTATALRRNAQSLPFPDEISELKGYFEGTNSVSAYPAQGLNVPFYI
                     LGSSPESAYLAAERGLPYAFASHFAPRFMDDAVRIYRTHFKPSEVLDKPYVILGVNAI
                     AAETDQEAEQLATTQTQFFLNVVTNAQNYLQPPVESDDKV"
     gene            8245..8499
                     /locus_tag="PXD69_002201"
     CDS             8245..8499
                     /locus_tag="PXD69_002201"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase"
                     /protein_id="HDL6284354.1"
                     /translation="MKAEIVPHFGPVSFQQNALYNQEKPVVRQMTACSLIGSRESIEQ
                     QLKSLKARIEIDEIMAVSYIFDEQKQHQSYTWLKEIADKV"
     gene            8501..8794
                     /locus_tag="PXD69_002202"
     CDS             8501..8794
                     /locus_tag="PXD69_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL6284355.1"
                     /translation="MSKTMQQKAADAHNMCKLKGDSMLDNSDRQIAFEAVYDSEEIAV
                     QAVEFFTQKAKSVETEPCDIQSEITPIIDGFLMKMWITFSCQAEVILFQMAVR"
BASE COUNT         2911 a         1758 c         1626 g         2505 t
ORIGIN      
        1 taaatttgta aacaatatta ctaattcagc tgcttgctct cattaaacac tatcgcacta
       61 aaaccctcac tcctagcgtt tcattttgtt gaagtagagt atttatccga gcggtttcca
      121 cacataccat attttgatac gccgtttctg tcatcgcact aacggtatta tgccaaggat
      181 tccaaagtac ggtttcggtc gcattaatat gctcaacttt aatggtgcgc tgatttgcaa
      241 aatcttgaat aaaattcacc gcttgtgccg gataaataca atccacattt tcacttatct
      301 tgcgaggtga tggcacttca acttcttgat cggttagctt atcaaaacag cgagttggca
      361 agccttgcac ttccactttt tcaatatcac caatattaaa ataagagtgc aatgccagtt
      421 gtgctggttc tggatctaaa tgggtaaaat ataactcaca agtttcgcct aacatcattt
      481 ccattttcgc tttattctct aaggcaaata ccaaaccgac attttcatca gaacaagtat
      541 gctcaactaa acgccattct tgaatgcgag ctgtgccgtg ggcaggctct tttattgaac
      601 cgaaccacgg ataacaaatt ggtataccgc cacgaatcgc agagccaatt ctaaacggtt
      661 ctatctcact taaccacagc acatcttgct ctgcattata cggctgccaa cttagcaatt
      721 gtgctccttg taatgcaatt ttagctttga atttattgtg attaacttct agcacgtcta
      781 attcattata tttgattaat tttaatgcat tactcaagtt cataatttat tcctttgatg
      841 actaaaataa ttgacagcaa acactactta gtaattttat ataaaataag ggaagacatc
      901 ttgccaaact atcagttata agacagaata gccagaattt tttattactt ataaggataa
      961 acttctcatt tatgaagacc aaaacattta ctcgttctta tcttgcttct tttgtaacaa
     1021 tcgtattaag tttacctgct gtagcatctg ttgtacgtaa tgatgtggac tatcaatact
     1081 tccgcgattt tgccgaaaat aaaggaccat tttcagttgg ttcaatgaat attgatatta
     1141 aagacaacaa tggacaactt gtaggcacga tgcttcataa tttaccaatg gttgatttta
     1201 gtgctatggt aagaggtgga tattctactt taattgcacc acaatattta gttagtgttg
     1261 cacataatac tggatataaa aatgttcaat ttggtgctgc aggttataac cctgattcac
     1321 atcactatac ttataaaatt gttgaccgca atgattatga aaaggttcaa ggagggttgc
     1381 acccagacta tcatactcct cgattaaata aattagtaac agaagttgtg cctgccgcag
     1441 tcaccaatgc aggtacatct attaaaccct acttaaatga agaacgcttc cctatgtttc
     1501 ttcgtgctgg ttcagggaca caagcgctaa gaggaaaaga aagtaataaa acaactggaa
     1561 tcgctggtgc ttatgaatat cttactggcg gtaccacatt acaattatct aaaagctccc
     1621 ctgatcactg gttagattat tcaagtaacc tttatcaagt aagctatgga ccactttcaa
     1681 cctatgcact acctggtgat agtggttcag gttcttacgc ctatgatatg aacgaaaaac
     1741 gatgggtatt agttggtgtg ctcaatttct ataatggtat ggataatcaa ttcaaccgct
     1801 ctgcgattat ccgtaaagat ttccacgaga aaaaatttgc cgaagatatt gcaggaacaa
     1861 tcaataatac cgtacaaaat gcacaattca attggactgc tcaaggtaaa tccagctctc
     1921 ttagtcaatc aaataatgtg caaaaactca acgttgatct aaaagatagt agcattgcaa
     1981 accaaaacac ttctctgcca caagaaaatc acggtaaaac cattaatttt aatggtaaag
     2041 atgcaactat tgtactaaaa caggatattg accaaggtgc aggtgcatta aatctgaacg
     2101 ctaatctcac tattcgtcct gaaacagacc aaacttggca aggtgcaggt attatcgtcg
     2161 gtaaagataa aaaagtgaat tggcaagtaa aaaatccaca aggcgatcgt ttatctaaac
     2221 tcggggaagg aacactctat gtaaatggac gtggacagaa tcttggcgat atcagtgtag
     2281 gtgatggtat tgtaatactt aaccagcaag ccgatcacca aggaagaaaa caggccttta
     2341 atacagtagg aatcgtaagt ggtcgcccca ctgttgtgct aggtagtgca gatcaagtta
     2401 atcccgataa tatttacttt ggatttcgcg gaggtcgttt agacctaaac ggtaacagca
     2461 tcgcctttaa acgtattcaa aacagcgata aacatgctcg tattgtaaac cacaatcgcg
     2521 atcacatttc taccttaata atacaaggcc aagatcctct cactagtaat gatcttatat
     2581 ggggaaaatg ggcaagtaat agcccagcag acatttacga atataccaat ccttatcaaa
     2641 ataaacgcaa agattacttc cgtctgaaag gtaattcgag agtatattat ccaacgaatg
     2701 ctacaagtaa cgatcactgg gaatttcttt ccagtaaccg cgagcaagca atacagaaaa
     2761 tcctagatgc caaaaactta agacagcgct atgacacgtt taatggtttt ataggggaag
     2821 atgcttccaa taaaactaat gggatattaa atgtcgtgtt tgatacaaaa acagaagtaa
     2881 atacagaaca agataaatta aagaatatct acacaatgtc gggaggattt aaccttaatg
     2941 gtgaactcac ccttaaaggt ggtacattgt tgctttctgg tcacccaacg ccacacgctt
     3001 atgatattaa gaataagcat gatgttgtgc gtgaaaacga ttggcaagac agccatttta
     3061 ctgctaaaaa tatcacggta aataaaatgg cacaactcta tatcgggaga aatgtcaatg
     3121 aagtaaatag tcactttact gcgactgata aagccaaact caatttagga tttattaatc
     3181 gttcaacgcc aagttgctat gattctgaat acacaggcac tacacattgt gaagtgcaag
     3241 cggtcatttc cgataatatt tttgcaaatc tagcaacaac cgccattaaa ggtaatgtta
     3301 aattacaaaa ccatagccaa ttaaatttag gcaaagcaaa cctcactggt tctgtacaag
     3361 ctgatcaaac aactcatatc actttagcaa atcacagtca ctggttaaac aatggtacga
     3421 gccagattgg gcatcttaca atggaaaaag ggtcgatcct tagcctaaac gataaatttg
     3481 ctaccacgga aatcccagtc cgattcaaca agatgatcat ccaaggtaat ctaaaaggta
     3541 atggacgaat taactatacc gcaaatttag ccaagggcga atctgatcat ctccaagttg
     3601 acggtattgc tgaaggaaat tttgtccttg ccgttagaaa tagcacaact gaagcaaatc
     3661 caaaaagctc attaaaccta ctaagcttaa aaaatagcaa ccaagaaggc aataaagctt
     3721 ctatttctct agaaaataat tatgttgatc taggtactta tcgttatgta ttagaaaatc
     3781 gtaatcacaa ttaccattta tttaatccat taataccaaa ttcaacctct aaagagatga
     3841 atgctacatc tgtatcctct attccaaaaa aggaatctgt tactaatgtt cctactttag
     3901 ataagaaaga aactgaacaa aatcttactc aactacaaaa agatttttca gcacaccaat
     3961 tagaaaatca aaaagcaaaa caatctatga taaatgctca atctgagcta agacgactca
     4021 attcacaact gaatgtattg caaaaatatg tgaattctcg tcgcttaggt tactatactc
     4081 agcaggcagt tttagaacaa attagcatta ttcaaaataa aattaaacaa acacaaacaa
     4141 tatttaatga cgctaatgca actgtaaaac tcacagatca aaagctagaa gaagccaaat
     4201 tagctctagg ctctgtaaac gatcttgtat taataaaagc ctctgctcca gcaatgcaag
     4261 caactaatca agatacgagt atgatgaata ttattcaagc agattggata agccaatacg
     4321 ctaacacagc actttctgaa ctctcggcac aggctaattc tgctctgcaa atcagtaata
     4381 gcttagatcg ccaactcttc aaacaaagcg ataaattcaa cgtatggagc agcgtcgaac
     4441 atcagaaaac cgagcataaa tcagatttat accgcccgta taaacaacaa accaacctga
     4501 cccaactggg catacaaatg ccgatagata acggtttaat gtttggagtt gcattatcta
     4561 aaaaccacgc taacgcggaa tttaacgagg gtgtaaacgg taaatcgaat ctactaatgg
     4621 caagcctata tggtaagtgg caatctcaac aaggcacttt tatcagcctt gatggcagct
     4681 acggtaaagc aaaaaaccaa ctctacctat ttggtgaaaa ccactttacc cgccgaattt
     4741 cctctattgg tgctaacatt ggacatcaat ttgacctcgc aggagttcaa attcagccaa
     4801 caataggagc aagatactac catttcagcg gccaagacta tacactagga ggagcgaaaa
     4861 tcagctcacc aaatacccac tttatgacat atcaagcggg tctaaaagct agtaaaacct
     4921 tttcattgga tgactggaaa gttgaaccaa gcattacaac ccactatgtg gatgcaagta
     4981 acaaacgctt agcagtaaac gtcaataata acaatatcaa ccaacgtttc ggtcgctatc
     5041 tgaaaaccga agctggtatc cgatttgaac ataaccaatg gcaattcgac ttacacgctg
     5101 gtttcattaa cggcaacgaa atcaaaaaac aacattttgc tggtgttaag ctaggatata
     5161 gctggtaaga aaaagcccct agaactattt ctaggggctt tttctactct taaaaagagt
     5221 atctaacttg ccttattttc taaccaattc ttaataaaat ctgctattcc cccaatatta
     5281 ttaatatcca accaattttc tctctcaagc gggtaatccg ttgcggtggc aatcgtccat
     5341 tggtctagct ctggcaatgg tttttcaatc cctttgcggt ggagctgaat ttttggcaag
     5401 gtttcgtgtt taaagccttc tacgaaaacg agatcaacct cttgcgggtt gaattttgca
     5461 attaattgag aaaattcgac cgcttgtttg gtttctgtca ttaatgccca acgttcatcg
     5521 cacacaatca ttgtcgggtt tgctcctgct tcacgtaggc ggtagctgtc tttgcctttt
     5581 ttatctacat caacgttatg gtgggaatgt ttaatcagcc caacccgaat accgcaagcg
     5641 gtcaattttg ggattaattt ttccaataag gtggttttac ctgtgccgct gtagcctgta
     5701 attgcaaggt tttttacagg gaattggctt actcggctta aatcttccaa tgtattcacg
     5761 ttggtgaatg ccgatttttg ttcggaaaaa tcaactgcca cgcttttttg tgattggaag
     5821 aacgcaagca attgctgttg gtttgagcct aaataggctt tcaaatcttc ttgtaccgaa
     5881 cgatgaatca acgcaaaagt gggatgtgga cgctcaccat catgggcata tgcaatttgt
     5941 acgttattta tccgcaaagc agtttttaat ttttgcaata acagctcagg cataaagggc
     6001 gtatcgcaag gcacaaaaag caaatagtca ctttcaattt gctcaaatcc tgccagcatt
     6061 ccactgagtg gaccttgaaa atcaggcaag ctatcttgat agtaagaaaa agcaggataa
     6121 agctgctgat attgctcaat agaacgattg acattaagcc aaatgtcact aacttgtggt
     6181 gaaagtcggg ctaaaatgtg tgaaataagc ggttttcctt caaaaagttg taaccctttt
     6241 tctaccccat tcattcgacg agctaaaccg cccgctaaaa tcacggctga aatgcgttct
     6301 tctattgttt tactcacagc tttatccctt aaaattttgc aaaaataaga gtaaaagtat
     6361 attatttcgt ttaatttcca acaagttttt taaggggtaa aagatgaaat gcgaacgttt
     6421 agaagagtta ttagagttac ttggcgaaca ttggcgtaaa aatcctgact tacacctcat
     6481 tgatattttg cagcagcttt cagttgaagt gggcgagcct gataatttca aagcgttaag
     6541 cgatgaagtg ttaatctatc agcttaaaat gcgaaatgca ggcaaatttg agcctattcc
     6601 cggcataaaa aaagattatg aagatgattt taaaacggct ttattgcgag ctcgtggaat
     6661 tttaaacgat taagattgtc ttatccgtta gctagtttag catttattat ttatcaacat
     6721 ttttgaagga atcattatga aaaaattggc attaaaaacg gcatttgttg cactttctgc
     6781 cctttttaca tttaactcaa cggcaatcgc tgctgatcca accgcaggca aagaatatat
     6841 cgaagtgcgt aaagcacctt ctgcacaaaa agaagtggtg gaatttttct cattctactg
     6901 cccacactgt tatgattttg aattaagcta caaaatccca agccaaatca aagaaaaatt
     6961 accaagcgat agcaaattag tgcaatatca cgttaatttc ttaggtcgcc aatctgaaga
     7021 tttaactcgt gcttgggcat tagcaatggc attaggtgcg gaagataaag taaaaaccgc
     7081 attatttgaa ggtgctcaaa aagacgcatt caaatcaatg gacgatattc gctctgtatt
     7141 cttagcaaac ggcattacag ctgaacagtt tgatagcggt attaatagct ttgcggtaaa
     7201 tggcttagtg aataaacaag ttcaattagc ggaagacttc caaattcgtg gtgtgcctgc
     7261 attcttcgta aatggtcaat accaactcaa cttagaaggc tttgcagatt cttcatcaac
     7321 gaatgatttc atcaaacgtt atgttgatgc ggttgtgttc ttaagcaaga aataacccct
     7381 taaaatagtt agggttttta caatgctgag taggtaaatc ctattcagca ttttttatat
     7441 gcaaactcgg agaacaaaat gacaaagtta tctatcctaa accttgtacc tattcgtgaa
     7501 gggcaaactg ccaaacaagc ggtcgattct atggtgaaat tagcaaaaca cgcggaaagt
     7561 atcggcattg aacgctattg gattgcagag caccacaata tgaaaaacct tgccagctcg
     7621 gcaacacagc tcctcattca gcatgccctt tctcacactg aaaaattaag agtgggatca
     7681 ggtggcgtga tgttgcctaa ccatagtcct tatattgtgg cagagcaata cggtacgctt
     7741 gaaacactct accctaaccg tgtagaactt gggcttgggc gagcaccagg caccgatatg
     7801 cgaaccgcta ccgctttacg ccgtaatgca caaagtctgc catttcctga tgaaatcagc
     7861 gaactaaaag gttattttga aggcacaaat tctgtgtctg cctaccctgc acaggggttg
     7921 aatgtgccgt tttatatttt aggctcaagc cctgaaagtg cctatttagc agcagaacgt
     7981 ggcttgcctt atgcctttgc ttcacatttc gctcctcgtt ttatggacga tgcggtgcga
     8041 atttatcgca cacactttaa gccgtctgaa gtgttagata aaccctatgt gattttaggt
     8101 gtgaatgcga ttgcggcaga aaccgaccaa gaggcagaac agcttgctac cactcagact
     8161 cagtttttct taaatgttgt taccaatgcc caaaactatt tacaaccgcc cgtcgaatcc
     8221 gatgataaag tgtgaaaaaa ttttgtgaaa gcggaaatcg taccgcattt cgggcctgtt
     8281 tcgttccaac aaaatgcgtt atacaaccaa gagaaacccg ttgttcgcca aatgactgct
     8341 tgttcactta tcggtagccg agagagcatt gaacaacagc tcaagtcatt aaaagcacgc
     8401 attgaaattg atgaaattat ggcggtaagc tacattttcg atgagcaaaa acagcatcaa
     8461 tcctatactt ggttaaaaga gattgcagat aaggtgtgat atgagcaaaa caatgcaaca
     8521 aaaagccgct gatgcacata atatgtgtaa gctaaaaggc gactctatgt tagataactc
     8581 agaccgccaa attgcctttg aagcagtgta tgatagtgaa gaaatagctg tacaagcggt
     8641 cgaatttttc acacaaaaag caaaatcggt agaaaccgag ccttgcgaca ttcaaagtga
     8701 aatcacaccc attatagatg gctttctgat gaaaatgtgg ataactttca gttgccaagc
     8761 agaagtaatc ttatttcaaa tggcggtgag atagatataa
//
LOCUS       DANLXO010000105         8373 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.105, whole genome shotgun sequence.
ACCESSION   DANLXO010000105 DANLXO010000000
VERSION     DANLXO010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8373
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.105"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            30..3188
                     /locus_tag="PXD69_002203"
     CDS             30..3188
                     /locus_tag="PXD69_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDL6284356.1"
                     /translation="MITINENTIEQSAIATLQSLGWDYTYGKKILAGLEHEWRERTAE
                     VILKPLLAQAIAKFNPNLPACEVENVVAQVCRADSGDLAERNRQAYDWLRNGVKITYQ
                     LYGEQVSDVVQLIDFQRPENNDFRIVNQLDISGKKGKRIPDLIGFVNGLPLVVFELKN
                     PLKENADIGKAFAQLQTYKDEISDLFVFNQALVISDGIVARIGSLTADFDRFTPWRVV
                     DEKNQSKRIVFEDELTALLQGVMTPKNLLDYVQNFVVFERDGKNRLIKKIGAYHQFYG
                     VNEAVDCTLLAATGNRKIGVFWHTQGSGKSLSMLFYAGKVLSQSSLKNPTLVLVTDRN
                     DLDGQLYATFCGGEALLKQTPIQADGRDELRSALASRSAGGVIFTTIQKFGLMEGELA
                     HPVLNERENIIVITDEAHRSQYGFSQKINHKGEYREGYAKHLRSALPNASFIGFTGTP
                     IELDDKDTQEVFGKYVSIYDFEDAVEDGATVPIIYEPRQISLGESGEFSKVMEEAQQL
                     IDDDENSYNFRLREKLHSVDSRLQKMAEDIIAHYDERTKQQDGKAMVVVMSRAICVKL
                     YEKITALRPEWHSNDVLQGSIKIVMTSNASDPAEWQKHNQDKKTLEKRFKDPDDPLNI
                     VIVRDMWLTGFDAPCCNTMYIDKPMSGHNLMQAIARVNRVFRNKSRENGGLIVDYVGL
                     TDELEKAMKQYTNAGGKEKPVRDISAVLEKMVEHITVIHGQFATPIDGQAVDIAKMLQ
                     ISEPPKLLNAILTSANHILALDRIQPPDNTAKDKTPRKNAFLQSVRLAKKGYALCGAL
                     KAVEPYKQELAFYDAVRATIIKNSTAPRNSSSENDRLLQLTALMNRAVQSDGVVDLFD
                     LLKKDRPNINLLSDEFLETVKNSPTKDLWLSAMERYLASQLREQSGANLATKKAFEQK
                     LKEAMNQYHNHNLSVLEILEELIALAKEFEARQKRGEALGLSPAEMAFYDALARNESA
                     VREMGDEVLMKLAKDITDKLRKSVTVDWQYKDSVRAKMRTLIRIALRTYKYPPDLQAE
                     AIEFVLQQAEEIAGEFAITETA"
     gene            complement(3222..6113)
                     /gene="glnE"
                     /locus_tag="PXD69_002204"
     CDS             complement(3222..6113)
                     /gene="glnE"
                     /locus_tag="PXD69_002204"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HDL6284357.1"
                     /translation="MLTTLIPLSQLNLPPNLQNSEQIQPLVTAISLSNFVHQTLQKQP
                     DLLAEWLAKFPTPDDCCNYTERLAKILARVENEEMLGRVLRQFRHRELARLSFIQSNK
                     LATVELVFQHLSDLAESLILAARDWLFQRCCAEYGTPKNTLGETQELLILGMGKLGGR
                     ELNFSSDIDLIFTYPDIGETEGGRKSIENSKFFTRMGQRLIKVLDEITADGFVYRTDM
                     RLRPFGDSGALVLSFTAMEDYYQEQGRDWERYAMIKAKILGEDSQNLNHRYLKQMLRP
                     FVYRRYLDFSAIQSLREMKEKISREVVRRNLTDNIKFGAGGIREVEFIAQTFQMIRGG
                     RDKILQERSLLKVLPRLAELNLLTQTQVETLHNAYIFYRQIENVLQAIDDKQTQTLPT
                     DEASQARLVFACQSYYQQDLYSEKTHWVEHSFNDWQQFMAVLSQYQQAVRQIFNEIIG
                     EEETQANCNPVNEKLAEWKDILHYNIRLEDLSAVLKGYPKVAENDYTEIFRHFSTTFQ
                     DWVKRPIGVRGREVLRNLMPRIADSIFKGEDHLLLLPRVLNIVDKITTRTTYLELMLE
                     KEQILPQLLALCSKSVMIAEQIARYPMLLDELMSHRGLTDVQAFEKYQSALQDYLIRI
                     PEEDEEALIDGLRQFKQTQILRIAAADILGVLLVMKISDHLTYLAEAIINAVVNMAWK
                     QVSQRFGVPEHLEADEKGFAVIGYGKLGGIELGYNSDLDLVFLHNAPEDSQTVGGKKE
                     ISSHQFYLKLAQKINSIFNLNTSAGVLYEVDMRLRPSGEAGLLVSTFNAYEHYQKNEA
                     WTWESQALVRTRCVFGAENLKQAFEKIRQSTLAQPRASGQLRQEICEMRQKMYQHLSS
                     HSAEQFHIKQDQGGITDIEFIAQYLVLAHSHQHPKMAVWSDNVRIFDSAVECGILSSE
                     QSEQLQHCYTALRNKIHHLNLLRKDSVVDASEFTTERAFVREMWQRLLA"
     gene            complement(6285..6566)
                     /locus_tag="PXD69_002205"
     CDS             complement(6285..6566)
                     /locus_tag="PXD69_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDL6284358.1"
                     /translation="MYYVIFAQDNPNMLEKRLEVRPAHLARLEKLQAEGRLLIAGPNP
                     TEDGSSVTGSTVIAEFNSLEEAQQWASQDPYVEAGVYSDVIIKPFKRVF"
     gene            complement(6568..7032)
                     /gene="yciA"
                     /locus_tag="PXD69_002206"
     CDS             complement(6568..7032)
                     /gene="yciA"
                     /locus_tag="PXD69_002206"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HDL6284359.1"
                     /translation="MKDKPYGKAPEGKLILRTLAMPSDTNANGDIFGGWIMSQMDLGG
                     AILAKELAKGRVVTVTVDKMIFHRPISVGDVVCCYGKLMHIGRSSMQVKVEVFIKQVY
                     EGNRERYLVTEALFTYVAIDKEGKPRAVPRENNPELDEALSLIDLTPEKQGE"
     gene            complement(7022..7579)
                     /locus_tag="PXD69_002207"
     CDS             complement(7022..7579)
                     /locus_tag="PXD69_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HDL6284360.1"
                     /translation="MKQLLEFIPLILFFVVYKMSGIQMASIALVIATIVQMIALKMLY
                     GKIEKQQIIMGGSVVFFGLLSAYFNEVKYLQWKVTIVYALFALVLLVSQFVFKTPLIK
                     KLLGKEIQLPEAVWNKINFGWAVFFLICMLLNIYISQYLSEEIWVDFKSFGIIGLTLV
                     ATVITGFVLYPYLKDAEKQEQKNER"
     gene            complement(7588..8337)
                     /locus_tag="PXD69_002208"
     CDS             complement(7588..8337)
                     /locus_tag="PXD69_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6284361.1"
                     /translation="MSIKFVDLLQQSWNFMRNQQAFSLFAIVTIVVVQLVFILVSPNS
                     PELMAESQPQQLQIDASKMVSILLPTILLGVVNLLINVLMIFNIQSINDGNYRQFFQN
                     AGNALKHFLPVLLLQFVMVLPLSLGASFAMASPETVIIALPVLVVGFYFFIKLSLVIY
                     AYLLEKPQKSLSESIKFTLQLSRGKMLPLILFCVISYLLPGMLSRLFTVFGNDFIGIF
                     ITIVLSAVINVFMAIFSFRFYQVYRQMPAVR"
BASE COUNT         2463 a         1823 c         1796 g         2291 t
ORIGIN      
        1 aaattattaa gtggggagat ggagttgtga tgattaccat caacgaaaac accattgaac
       61 aatccgccat tgcaactttg caaagcttgg gctgggacta cacctacggc aaaaaaattt
      121 tggcaggttt agaacacgaa tggcgggagc gaaccgctga ggtgatttta aagccgcttt
      181 tggcgcaagc gattgcaaaa ttcaacccga atttgcccgc ttgtgaggtg gaaaatgtgg
      241 tggcacaggt gtgccgtgcc gacagtggcg atttggcgga gcgtaatcgt caggcttatg
      301 attggctaag aaatggggtc aaaatcactt atcagttgta cggtgagcag gtgtctgatg
      361 tggtgcagct gattgatttt cagcgtccag aaaataacga ttttcgcatt gtcaatcagc
      421 tggatattag cggcaaaaaa ggcaaacgca ttccggattt gattggcttt gttaatggct
      481 tgccgctggt ggtgtttgag ctgaaaaatc cgctcaaaga aaatgccgac attggcaagg
      541 cgtttgccca actgcaaacc tataaagatg aaatttctga tttgtttgtg tttaatcagg
      601 cactcgtgat ttcagacggc attgtcgccc gcatcggttc gctgaccgct gatttcgacc
      661 gttttacccc ttggcgtgtg gttgatgaaa aaaatcagag caaacgcatt gtgtttgaag
      721 atgaactcac cgccctgctg caaggcgtga tgacacccaa aaatctcttg gattatgtgc
      781 agaattttgt ggtgtttgaa cgggacggca aaaaccgctt aattaagaaa atcggagcat
      841 atcatcagtt ttatggcgtg aatgaagcgg tggattgcac cttgcttgcc gccacaggca
      901 accgcaaaat cggcgtgttt tggcatacgc aaggttcggg caaatcgctt tcgatgctgt
      961 tttatgcagg taaagtatta agccaaagca gcctgaaaaa tccaactttg gtgttggtaa
     1021 ccgaccgcaa cgatttggac ggtcagcttt acgccacttt ttgcggtggc gaggcactgc
     1081 tcaaacaaac gccaatccaa gccgatgggc gagacgaact ccgctctgcc cttgccagtc
     1141 gttcggcagg cggtgtgatt tttaccacca ttcaaaaatt cggcttaatg gagggtgagc
     1201 ttgcccaccc tgtattaaac gagcgggaaa acatcattgt gattaccgat gaagcacacc
     1261 gctcacaata tggttttagc caaaaaatca accacaaagg cgagtatcgt gagggttatg
     1321 ccaagcattt acgcagtgca ttgccgaatg cctcttttat tggctttact ggcacaccga
     1381 ttgaacttga tgacaaagac acccaagaag tcttcggtaa atatgtctcg atttatgatt
     1441 ttgaagatgc ggtggaagat ggggcaaccg tgccgattat ttatgagcca cgccaaatca
     1501 gcttaggcga aagtggcgag ttttccaaag tgatggaaga ggcacaacaa ctgattgatg
     1561 acgatgaaaa cagctataac ttccgcctgc gtgaaaaact gcacagcgtg gatagccgtt
     1621 tgcaaaaaat ggcggaagat attattgccc attacgatga gcgtaccaaa cagcaagacg
     1681 gcaaggcgat ggttgtggtg atgagccgtg ccatttgcgt gaaattgtac gaaaaaatca
     1741 ccgcacttcg tccagaatgg cactcaaacg atgtgcttca aggcagcatt aaaattgtga
     1801 tgacaagtaa tgccagcgac cctgccgagt ggcaaaaaca caatcaggat aagaaaacct
     1861 tagaaaaacg ctttaaagac ccagacgatc cgctcaacat cgtgattgtg cgggatatgt
     1921 ggctgacagg ctttgatgcg ccctgctgta acacaatgta cattgataaa ccaatgagcg
     1981 gacacaacct gatgcaggca atcgctcggg taaatcgggt atttcgcaac aaaagccgtg
     2041 aaaatggcgg cttgattgtg gattatgtgg gcttgaccga tgagctggaa aaagcgatga
     2101 agcagtacac caacgcaggc ggtaaagaaa agccggtgcg ggacatttca gcggtgctgg
     2161 aaaaaatggt ggaacatatc acggtcattc atgggcaatt tgccacaccg attgacggac
     2221 aagcggttga tattgccaaa atgttgcaaa tcagcgaacc gcctaaactg ctcaatgcga
     2281 ttttgacatc agccaaccat attcttgccc tagaccgcat tcagccacct gataacactg
     2341 ccaaagacaa aaccccacgc aaaaacgcct ttttgcaatc ggtacgcttg gcgaaaaaag
     2401 gttatgcttt gtgtggggca ttaaaagcag ttgaacccta taaacaggaa ctggcgtttt
     2461 atgatgcagt gcgtgccacc attatcaaaa acagcaccgc tcctcgcaat tcttcgagcg
     2521 aaaatgaccg cttgttgcag cttaccgcct tgatgaatcg tgcggtacag tcggatggtg
     2581 tggtggattt atttgatttg ctgaaaaaag accgcccaaa catcaacctg ctttctgatg
     2641 agtttttgga aacagtaaaa aacagcccaa ccaaagattt gtggctatca gcaatggagc
     2701 gttatcttgc ctcacaactg cgagagcaaa gcggtgccaa tcttgccaca aaaaaagcat
     2761 ttgaacagaa actcaaagag gcgatgaacc aataccacaa ccacaattta agcgtattgg
     2821 aaattttaga agagctgatc gccctcgcca aagagtttga agcccgccaa aaacgagggg
     2881 aagcgttggg actaagccct gcggaaatgg cgttttatga tgctttggca cgtaatgaaa
     2941 gtgcggtgcg ggaaatgggc gatgaggtat tgatgaaact tgccaaagac attaccgata
     3001 aattacgcaa atcggtcacc gtagattggc aatataaaga ctcggttcgt gccaaaatgc
     3061 gaaccttaat ccgcattgct ctgcgtacct ataaataccc gcccgattta caggcggaag
     3121 cgattgagtt tgtgttgcaa caagcggaag agatcgccgg agagttcgct atcaccgaaa
     3181 cggcgtaatc tatattaggg cgtgcaatgt acgccctaaa tttatgctaa taacctctgc
     3241 cacatttccc gcacaaatgc tcgctcggtg gtaaattcac ttgcgtccac cacgctgtct
     3301 ttgcgtaata agtttaggtg gtggattttg ttacgcagtg cggtgtagca atgttgtagc
     3361 tgttcgcttt gttcggaact taaaataccg cattctactg cgctgtcgaa aattcggaca
     3421 ttatccgacc atactgccat tttcgggtgt tggtggctgt gggctaatac caaatattgg
     3481 gcgataaatt caatatcggt aatacctcct tgatcttgtt taatatgaaa ttgctcggct
     3541 gaatgcgagc ttaaatgttg gtacattttc tgtcgcattt cgcaaatttc ttggcgtaat
     3601 tgaccgcttg cacgaggctg agcaagcgtg ctttggcgga ttttttcaaa ggcttgtttg
     3661 aggttttccg ccccaaatac acatcttgtc cgcacgaggg cttggctttc ccacgtccac
     3721 gcttcatttt tttgataatg ctcgtaggca ttgaaagtgc tgactaaaag cccagcctcg
     3781 cctgatgggc gaagtcgcat atccacttca tatagtacgc cggcactggt attaaggtta
     3841 aaaatcgagt taattttttg agccaatttt aagtaaaatt gatggcttga aatctctttt
     3901 ttaccgccaa cagtttggct atcctctggg gcattatgca agaaaaccaa gtcgagatct
     3961 gaattatagc ccagttcaat cccgcctagc ttgccgtagc caataactgc aaaccctttt
     4021 tcatcagcct ctaaatgttc cggcacacca aagcgttggc tgacttgctt ccacgccata
     4081 tttaccaccg cattaataat cgcttctgct aagtaagtaa gatgatcgct gatcttcatt
     4141 accagcagca cgcctaaaat atcagcagcg gcgatgcgta aaatttgggt ttgtttgaac
     4201 tgacgtaagc catcaatcag tgcttcttca tcttcttcag gaatgcggat taaataatcc
     4261 tgcaaggcag attgatattt ttcaaaagcc tgcacgtcgg ttaagcctct atggctcatc
     4321 agctcatcaa gtagcattgg atatcgagct atctgttccg caatcataac cgacttacta
     4381 cacaatgcta aaagttgagg cagaatctgc tctttttcga gcattaattc caaataggta
     4441 gttcgggtgg tgattttatc gacaatattc aacacgcgag gcaataacaa taaatgatct
     4501 tcacctttaa aaatgctgtc ggcaattcta ggcattaaat tgcgtagcac ctctcgccct
     4561 cttaccccaa tcgggcgttt tacccaatct tgaaaggtag tagaaaagtg acggaaaatc
     4621 tccgtataat cattttctgc aacctttgga taacctttta gcactgcgga taaatcttca
     4681 aggcgaatgt tatagtgcaa aatgtctttc cattcggcta atttttcatt aaccggattg
     4741 cagttggctt gtgtttcctc ttcaccgata atttcattaa aaatctggcg tactgcttgt
     4801 tgatattggc tcaatactgc cataaattgt tgccaatcgt taaaggaatg ctccacccaa
     4861 tgcgtttttt cgctatatag atcttgctga taatagcttt ggcaagcaaa tacaaggcgg
     4921 gcttgcgagg cttcatcagt gggtagggtt tgagtttgtt tatcgtcaat cgcttgtaat
     4981 acattttcaa tttgacggta aaaaatatag gcattgtgga gcgtttccac ctgcgtttgg
     5041 gttaataaat ttaattctgc caagcgtggt agcactttta acaggctacg ttcttgtaaa
     5101 attttatctc gcccgccacg gatcatttgg aaagtttggg cgataaactc cacttcccga
     5161 atcccaccgg caccaaattt aatattatcg gttaaattac ggcgaaccac ttcacggctg
     5221 attttttctt tcatttcacg caacgattgg attgcactga aatccagata acggcggtaa
     5281 acaaaagggc ggagcatttg ctttaaatag cgatgattta aattttggct atcctcgcct
     5341 aaaatttttg ctttaatcat cgcataacgt tcccaatcac gcccttgctc ttggtaataa
     5401 tcttccattg cagtaaaact cagcaccaag gctccgctat caccaaaggg gcgaagtcgc
     5461 atatcggtac gatacacgaa accatcagcg gtgatctcat ctaatacttt aattaaccgc
     5521 tgccccattc gggtaaaaaa tttgctgttt tcaatcgatt tgcgtccacc ttcggtttca
     5581 ccaatatcgg ggtaggtaaa aatcaggtca atatcggaag aaaaattaag ctctcgtccg
     5641 cccaatttgc ccatacctaa aatcagcagt tcttgtgttt cgccaagagt gttctttggc
     5701 gtgccatatt cggcacagca acgctgaaac aaccaatctc gagcggctag aatcaggctc
     5761 tcggctaaat ccgacaaatg ctgaaatacc aattctaccg tcgctaattt atttgactga
     5821 ataaagctca gacgagccaa ttcacggtgg cgaaattgcc gcaaaaccct ccccaacatt
     5881 tcttcatttt ccactcttgc taatattttt gctaaacgct cagtataatt gcagcaatca
     5941 tcaggcgtag gaaacttggc aagccattct gccagtaaat ccggctgttt ttgcaaggtt
     6001 tgatgcacga aattggaaag cgaaatcgcc gtcacaagcg gttgaatttg ctcagaattt
     6061 tgcaaattgg gcggtaaatt gagttgggat aagggaatta gggtggtaag cataaattta
     6121 ggctcaaaat tgaaaataga tagaatttta cgctcgatca attcccctct ttagcaaaga
     6181 gggcttaggg gagatttggc agaggtaatt ttactctcat acgaaacatt aatatcgtaa
     6241 tcaaatctcc cccagcccct cttttctaaa gaggggagaa aaaattaaaa cactctttta
     6301 aacggtttaa taatcacatc gctatacaca ccggcttcca cataaggatc ttggcttgcc
     6361 cattgttgag cttcttcaag tgagttgaac tctgcaatta cagttgaacc ggttacgctt
     6421 gagccgtctt cagtcgggtt aggccctgcg attaataatc gaccttctgc ctgtaatttt
     6481 tccaaacgag ccaaatgagc cgggcgaact tctaaacgtt tttccaacat attgggatta
     6541 tcttgggcaa agataacata atacatacta ttctccttgt ttttcagggg ttaaatcaat
     6601 tagcgataat gcttcgtcta attcggggtt attttctctc ggcacagcac gcggtttgcc
     6661 ttctttatca atcgctacat aggtaaataa ggcttcggtt acgagataac gttcgcgatt
     6721 gccctcataa acttgtttga taaagacctc gactttcact tgcatcgaag aacgccctat
     6781 gtgcattaac ttgccgtagc agcagaccac atcaccgact gaaatcgggc ggtggaaaat
     6841 cattttatct accgttaccg taacgactct accttttgcc aactctttgg ctaaaattgc
     6901 accgcctaaa tccatctgcg acataatcca accgccgaaa atatcgccat tggcgttagt
     6961 atctgacggc attgccaaag ttcttaaaat cagtttccct tccggggctt ttccataggg
     7021 tttatctttc atttttttgt tcctgctttt cagcatcttt taagtaaggg taaaggacga
     7081 aaccggtaat aaccgttgcg actaaggtta agccaataat gccaaaggat ttgaaatcaa
     7141 cccaaatctc ttccgataaa tattgactga tataaatatt cagcagcata caaatcagaa
     7201 agaatactgc ccaaccgaag tttattttat tccacactgc ttcaggcaac tgaatttctt
     7261 tgcctaataa ttttttgatt aatggtgttt tgaacacaaa ttggctcact aatagcacca
     7321 atgcaaacag agcgtaaaca atggttactt tccattgtaa atatttaact tcattaaaat
     7381 aggcactcag taagccgaaa aagaccaccg agccacccat aataatttgc tgtttttcaa
     7441 ttttgccgta gagcattttt aaggcgatca tttgcacgat tgtagcgata accaatgcga
     7501 tagacgccat ctgaataccg ctcattttat acacgacaaa aaacagaatc agcggaataa
     7561 attcaagtaa ctgtttcatt gatactccta acgcactgcc ggcatttggc ggtaaacttg
     7621 gtaaaagcgg aagctgaaaa tcgccataaa gacgttaatt accgcactta aaacaatggt
     7681 aatgaatatg ccaataaagt cattaccaaa cactgtgaac aaacgagata acatccccgg
     7741 taataaataa gaaatcacac aaaataaaat cagcggtagc atttttccac gtgataattg
     7801 aagcgtaaat ttaatacttt ccgatagact tttctgcggt ttctccaata aataagcata
     7861 aatcactaac gataatttga taaaaaaata aaaaccgact accaacaccg gcaatgcaat
     7921 aatcactgtt tcaggcgatg ccattgcaaa agatgcaccg agagaaagcg gtaacaccat
     7981 cacaaattgt aacaacagca caggtaggaa gtgctttaat gcgtttcctg cattttggaa
     8041 aaattgacga taattgccat cgttaatcga ttggatattg aaaatcatta agacattgat
     8101 caaaagattg acaacaccta ataaaatagt tggcaatagt atagacacca ttttagaggc
     8161 atcaatttga agttgttgcg gttgcgactc cgccattagc tcaggcgaat ttggcgacac
     8221 taaaataaaa accaactgca caaccacaat ggtgacaatg gcaaacagtg aaaatgcttg
     8281 ttgattacgc ataaagttcc aactttgctg caataaatcg acaaatttaa ttgacataaa
     8341 atacccttca atagattgta aatattttgt tgt
//
LOCUS       DANLXO010000106         8352 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.106, whole genome shotgun sequence.
ACCESSION   DANLXO010000106 DANLXO010000000
VERSION     DANLXO010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8352
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.106"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            49..1041
                     /locus_tag="PXD69_002209"
     CDS             49..1041
                     /locus_tag="PXD69_002209"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HDL6284362.1"
                     /translation="MKKSFILQQQEISFVKNTFTQYLIDKLGIIEVQGPILSEVGNGM
                     QDNLSGIEKAVKVNVKCIPSATYEVVHSLAKWKRHTLARFGFKEGEGLFVHMKALRPD
                     EDSLDRTHSVYVDQWDWEKVIPEGRRNFDFLKETVNEIYKAIRLTELAVEARFDIPSV
                     LPKQITFVHSEDLVQRYPNMTSKERENAICKECGAVFLIGIGGKLSDGKPHDGRAPDY
                     DDWTTESEQGYKGLNGDILVWNEELGTAFELSSMGIRVDETALRLQVALTGDEDRLEM
                     DWHKDLLAGRLPLSIGGGIGQSRLVMFLLRKKHIGEVQSSVWPKAVFEEFENIL"
     gene            complement(1165..1584)
                     /gene="atpC"
                     /locus_tag="PXD69_002210"
     CDS             complement(1165..1584)
                     /gene="atpC"
                     /locus_tag="PXD69_002210"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDL6284363.1"
                     /translation="MASQFELTVVSAERKIFEGTVTSVRVSGTDGELGVYAGHAPLLT
                     AIKPGMVKFTLADGKEEFIYVSGGFLEVQPTVVTVLADTAIRGEELDEQRILAAKRKV
                     EETLSKTSDADMTAKLAREIAKLRVYELTKTKLANKR"
     gene            complement(1612..2985)
                     /gene="atpD"
                     /locus_tag="PXD69_002211"
     CDS             complement(1612..2985)
                     /gene="atpD"
                     /locus_tag="PXD69_002211"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDL6284364.1"
                     /translation="MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQL
                     GGGVVRCIALGSSDGLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEE
                     ERWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMEL
                     IRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA
                     LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVL
                     QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDP
                     LDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDDKRLVARAR
                     KIERFLSQPFHVAEVFNGVPGKFVPLKETIRGFKGILEGEYDHIPEQAFYMAGSIDEV
                     VERAKQM"
     gene            complement(3006..3872)
                     /gene="atpG"
                     /locus_tag="PXD69_002212"
     CDS             complement(3006..3872)
                     /gene="atpG"
                     /locus_tag="PXD69_002212"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDL6284365.1"
                     /translation="MAGAKEIRTKIASVRNTQKITKAMEMVAASKMRKTQERMAASRP
                     YAESIRKAISHIAKGNIEYKHPFLTPRPVKKVGYLVVSTDRGLCGGLNINLFKTVLHE
                     LKEKDDQGVKSRLAVVGNKGISFFNPMGLEIKGHINGLGDTPAMEDLVGIVNGMVNAY
                     REGEIDEVYVVYNRFINTMSQKPTVQQLLPLPALENDSLEQTGSWDYLYEPNPQALLD
                     SLLVRYLESQVYQAVVDNLASEQAARMVAMKAATDNAGNLINELQLVYNKARQASITN
                     ELNEIVAGAAAI"
     gene            complement(3898..5439)
                     /gene="atpA"
                     /locus_tag="PXD69_002213"
     CDS             complement(3898..5439)
                     /gene="atpA"
                     /locus_tag="PXD69_002213"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDL6284366.1"
                     /translation="MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGVIRIHGL
                     SDVMQGEMIALPGNRYAIALNLERDSVGAVVMGPYADLAEGMQVQCTGRILEVPVGRG
                     LLGRVVNTLGQPIDGKGEIQNDGFSPIEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGAL
                     ANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERASRVNADYVERFTNGAVKGQTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLESGLFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGG
                     IRTALAQYRELAAFAQFASDLDEATRKQLSHGQKVTELLKQKQFEPMSVAQLGLSLAA
                     AEYGYLDDIPVERVGSFEANLLAYAQSNYGEFMQELSKSGNFNDEIKDKLNEILSGFK
                     KNSAW"
     gene            complement(5452..5985)
                     /gene="atpH"
                     /locus_tag="PXD69_002214"
     CDS             complement(5452..5985)
                     /gene="atpH"
                     /locus_tag="PXD69_002214"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDL6284367.1"
                     /translation="MSELSTVARPYAKAAFDFALEQGQLEQWQQMLTFSAAVANDEQV
                     ASFLNSSLASGQISETFIKICGEQLDQYGQNFIRVMADNKRLAVLPAVLNAFLELRAE
                     QESIKDVEVVSADKLTDAQEAKIANAMEKRLGTKVRITSSIDSSLIAGVIIRYDDVVI
                     DGSSRGQLNRLSQELSL"
     gene            complement(5999..6469)
                     /gene="atpF"
                     /locus_tag="PXD69_002215"
     CDS             complement(5999..6469)
                     /gene="atpF"
                     /locus_tag="PXD69_002215"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDL6284368.1"
                     /translation="MNLNATLIGQLIAFALFVAFCMKFVWPPLIRVIEERQANIASAL
                     ASAEKAKQEQADSKAAADQEILRAKEEAQNIIDLATKRRNEILESVQAEAEVERQRII
                     EQGYAEVESERKRVQEELRQKVAALAIAGAEKIVGRSVDAAANNDIIDKLVAEL"
     gene            complement(6530..6784)
                     /gene="atpE"
                     /locus_tag="PXD69_002216"
     CDS             complement(6530..6784)
                     /gene="atpE"
                     /locus_tag="PXD69_002216"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDL6284369.1"
                     /translation="MESVITATIIGASILLAFAALGTAIGFAILGGKFLESSARQPEL
                     ASSLQTKMFIVAGLLDAIAMIAVGISLLFIFANPFIDLLK"
     gene            complement(6902..7690)
                     /gene="atpB"
                     /locus_tag="PXD69_002217"
     CDS             complement(6902..7690)
                     /gene="atpB"
                     /locus_tag="PXD69_002217"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDL6284370.1"
                     /translation="MAGTTAEYISHHLSFLSTGEGFWAVHLDTLFFSLVAGAIFLWVF
                     SRVAKNATTGVPGKLQCFVEIVIEWVNGLVKDNFHGPRNVIAPLALTIFCWVFIMNAI
                     DLIPVDFLPQLANLFGIHYLRAVPTADISATLGMSICVFALILFYTVKSKGFGGLVKE
                     YTLHPFNHWAFIPVNFILETVTLLAKPISLAFRLFGNMYAGELIFILIAVMYMADNFA
                     LQALGIPLHLVWAIFHILVITLQAFIFMMLTIVYLSIAYNKADH"
     gene            complement(7713..8096)
                     /locus_tag="PXD69_002218"
     CDS             complement(7713..8096)
                     /locus_tag="PXD69_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDL6284371.1"
                     /translation="MSAVINRAKSQYKQALKVEFFLLCVFALGVSLWKMNFNFSFLGG
                     ALASFLPHLVFVYWVFFKKSAKNQSKMTAFYRGEGMKWLVTIILVIGCFKLIPALDVV
                     LFFVGYFIALFLNNMIPFVLSKHHH"
BASE COUNT         2498 a         1867 c         1552 g         2435 t
ORIGIN      
        1 aagcacgaga aataaaaaat caacattctt taattaggaa agcaaacaat gaaaaaatct
       61 tttattttac agcaacaaga aatcagtttt gttaagaaca catttactca atatttaatt
      121 gataaattag gcattattga agttcagggg cctattttga gcgaagtcgg caacggtatg
      181 caagacaacc tttccggtat cgaaaaagca gtaaaagtaa acgtaaaatg tattccaagc
      241 gctacttatg aagtggttca ttctcttgca aaatggaaac gccacacctt agctcgtttt
      301 ggatttaaag aaggagaagg gttatttgtt catatgaaag ctcttcgccc tgatgaagat
      361 tctttagatc gcacacactc ggtatatgtt gaccaatggg actgggaaaa agtcattcct
      421 gaaggtcgcc gcaacttcga tttcttaaaa gaaacggtaa acgaaatcta taaagcaatt
      481 cgtttaaccg aattagcggt ggaggctcgt ttcgatattc catctgtatt gcctaaacaa
      541 attactttcg ttcacagcga agacttagtg caacgctatc cgaatatgac cagcaaagag
      601 cgtgaaaatg ctatctgtaa agagtgcgga gcggtgttct taatcggtat cggcggcaaa
      661 ttatcagacg gtaaacctca cgatggacga gctccggact atgatgactg gacaaccgag
      721 tccgaacaag gctacaaagg cttaaacggc gatattttag tttggaacga agaactcggc
      781 acagcctttg aactttcctc aatgggtatt cgtgtagatg aaaccgcctt acgcttacaa
      841 gttgctttaa ctggcgacga agaccgcctc gaaatggatt ggcacaaaga tttattagcc
      901 ggcagactcc cgctttctat cggcggcggt atcggtcaat ctcgcttagt gatgttctta
      961 ctacgcaaaa aacacatcgg tgaggtgcaa tccagtgtct ggccaaaagc ggtatttgaa
     1021 gagtttgaga atattcttta ataaaacaaa aaagcgaacc ttagggttcg cttttgcttt
     1081 ctacaagcgg tcttattttg caaaaaattt actgttttta accgcttgta aaacaaaacc
     1141 ccactttcgt ggggtttttt gatattaacg tttattcgct aatttggttt tagtgagttc
     1201 gtaaacacgc agtttcgcaa tttctctcgc taacttcgcg gtcatatccg catcgctggt
     1261 ttttgaaagt gtttcttcta ctttgcgttt tgcggcaaga atacgctgtt cgtctagttc
     1321 ttcaccacga attgcggtat cagccaacac tgttactacg gtcggttgta cttcaaggaa
     1381 accacctgaa acgtagataa actcttcttt gccgtcagct aaagtgaatt taaccattcc
     1441 cggtttaatt gcggttaata acggtgcatg ccctgcatac acccctaatt caccatctgt
     1501 ccctgaaaca cgcacgctgg taactgtgcc ttcaaagatt ttacgttctg cactcactac
     1561 cgtgagttca aattgagatg ccatgttgtt ctcctttagt ttagaacaaa attacatctg
     1621 ttttgctctt tcaaccactt cgtcaattga acccgccata tagaacgctt gttccggaat
     1681 atggtcgtat tcgccttcta aaatgccttt aaagccacga attgtttctt ttaacggtac
     1741 gaatttgccc ggtacgccgt tgaatacttc cgcaacgtgg aatggttgtg aaaggaaacg
     1801 ttcgatttta cgcgcacgag caacaaggcg tttgtcgtct tccgataatt catccatacc
     1861 caaaattgca atgatgtctt ttaactcttt ataacgttgt aatgtacctt gtacaccacg
     1921 agcaacgtta tagtgttcct caccaaccac gagtggatct aactgacgag aggttgagtc
     1981 aagagggtca accgccgggt aaataccgag tgaagcgata ttacggctta ataccaccgt
     2041 tgagtctaag tgggcaaagg tagttgccgg agacgggtca gttaagtcat ccgccggaac
     2101 atataccgct tgcacagagg taatagagcc ggttttggtt gaggtaatac gctcctgtaa
     2161 tacgcccatc tcttctgcaa gagtcggctg ataacctacc gcagacggca tacgacctaa
     2221 taacgcagat acttcggtac cagctaaagt ataacggtag atgttatcca cgaagaataa
     2281 tacgtcacga ccttcatcac ggaatttttc tgccatggtt aagccggtta atgccacacg
     2341 cagacggttg cccggtggtt cgttcatttg accgtaaacc agcgatactt tgtctaatac
     2401 gttagagtct ttcatttcgt ggtagaagtc attaccctca cgagtacgct cacctacacc
     2461 ggcgaatacc gagtaaccgc tatgttcgat agcgatgtta cggattaact ccatcatatt
     2521 tacggtttta cctacacccg caccaccgaa taagccaact ttaccaccct tagcaaatgg
     2581 agcaactaag tcgataactt tgataccggt ctctaaaagc tcggtgctgt tcgcttgttc
     2641 ttcgtagctt ggtgctgcac ggtggattgt ccaacgttct tcttcaccga ttgggcctgc
     2701 ttcatcaatt ggctcaccta atacgttcat aatacgaccg agtgtttttg taccaaccgg
     2761 tacttcaatc gctttattcg tattttcaac ttttaagcca cgttttaaac catcagatga
     2821 accaagtgcg atacaacgga ccacaccgcc acctaattgt tgttgaactt caagggttaa
     2881 tcctgattca acttttaatg catcataaac ttttggtact gcatcttgcg gaaactcaac
     2941 atcgattacc gcaccgatga tctgtacaat ttttcccgtt gccattaccg ttcctctatt
     3001 cattgttaaa ttgctgcggc acccgcgaca atttcattta attcattcgt aatacttgct
     3061 tgacgagctt tgttatacac taactgtaac tcattaatca gattacctgc gttatcggtt
     3121 gctgctttca ttgccaccat tcgagcagcc tgttcagacg caagattatc taccactgcc
     3181 tgataaactt gagattctaa ataacgaacc agtaagctgt ctaataacgc ttgtggattt
     3241 ggttcataga gataatccca agaaccagtt tgctctaatg agtcattttc cagtgcaggc
     3301 aaaggaagca actgttgtac tgtcggtttt tgtgacatcg tgtttataaa acggttatat
     3361 accacataca cttcatcaat ttcgccttca cggtaggcat ttaccatacc attaacaata
     3421 ccgactaaat cttccattgc cggtgtatca cccaatccat tgatatgacc tttaatctct
     3481 agccccattg ggttaaaaaa ggagatccct ttatttccca ccacagcaag tcgagactta
     3541 acaccttggt catctttttc tttcaattca tgtaaaacgg ttttaaataa attgatattt
     3601 aagccaccac ataaaccgcg atcggttgaa actactaaat agccaacttt ttttaccgga
     3661 cgtggggtca aaaatgggtg tttatactca atgttacctt tggcaatatg gctaattgcc
     3721 ttgcgaatac tttcagcata agggcgagaa gccgccatac gctcttgggt tttacgcatt
     3781 tttgatgcgg caaccatttc catcgctttg gtaatttttt gtgtattacg aacacttgca
     3841 attttggttc ttatctcttt agcacctgcc atattatttc tccgctaaaa agttagatta
     3901 ccaagcactg ttctttttga aaccagataa aatctcgttc aatttatctt taatttcatc
     3961 gttgaaattg ccggattttg acagttcttg cataaactcg ccgtagttac tttgagcata
     4021 agctaataag tttgcttcaa atgagccaac acgctcaacc ggaatatcat ctaagtaacc
     4081 gtattcagct gctgctaatg ataaacctaa ttgtgcaaca gacatcggct cgaattgttt
     4141 ttgtttcaac aattcagtta ctttttgacc gtgtgaaagc tgtttacgtg ttgcttcatc
     4201 aagatctgat gcgaactggg caaatgccgc taattcacgg tattgagcaa gtgcggtacg
     4261 gataccaccg gcaagcttct taaccagttt agtttgtgca gaaccaccta cacgggaaac
     4321 cgagataccc gggtttaccg cagggcgaat accggcattg aataagcctg attctaagaa
     4381 aatctgacca tcggtaattg aaattacgtt agtcggtacg aaggctgaaa cgtcacctgc
     4441 ttgggtttcg atgatcggta atgcggttaa agaaccggtt tgacctttca cagcaccgtt
     4501 agtgaaacgt tctacatagt ctgcatttac acgagacgca cgctctaata agcgagagtg
     4561 tagatagaac acatcacccg ggaatgcttc acgacccggt ggacggcgta ataacaatga
     4621 aatttgacgg taagcaactg cttgcttaga caaatcatcg taaacgatca acgcatcttc
     4681 accacggtca cggaagtatt cacccattgc acaacctgca taaggtgcaa gatattgtaa
     4741 tgcagcagat tcagacgcag aagccactac aacgatagtg ttcgctaatg caccgtgttc
     4801 ttctaattta cgcaccacgt tggcgatagt tgatgccttt tgaccgattg caacgtagat
     4861 acatttaatg cctgaatcac gttggttgat gatcgcatca atcgctaatg cggttttacc
     4921 ggtttgacgg tcacctataa tcaattcacg ctgaccacga ccgattggta ccattgagtc
     4981 caccgctttg taaccggttt gaaccggttg atcaaccgat tgacggtcga taacgcccgg
     5041 tgcgatcact tcgattggtg agaaaccgtc attttggatt tcgcctttac catcgattgg
     5101 ctgacctaag gtatttacaa cacgacctaa taagccacga ccaaccggca cttctaaaat
     5161 acgaccggta cattgtactt gcataccttc tgctaaatcg gcataaggtc ccattacaac
     5221 tgcaccaaca gaatctcttt ctaagtttaa tgcaatcgca taacgattgc ccggtaatgc
     5281 aatcatttca ccttgcatta catcagataa gccgtggata cgaataaccc cgtcacttac
     5341 cgaaacgatt gtccctgtgc tttgagcttc actcaccaca ttaaactggg caatacgttt
     5401 tttaatcaat tcactaattt cagttgaatt tagttgcatt ttttattcct cttacaagct
     5461 caactcttga ctcaagcggt ttagctgtcc acgactacta ccatcaatca ctacatcatc
     5521 ataacgaatg atcacacccg caattaatga actatctatt gatgaagtaa tacgtacttt
     5581 cgttccgagt cgcttttcca tcgcattggc aatttttgct tcttgtgcat ctgttaattt
     5641 atctgcagaa acaacctcaa catctttaat tgattcctgt tctgctctta attctaaaaa
     5701 tgcattcaat accgcaggta atactgctaa acgcttgtta tcagccatta cgcgaatgaa
     5761 attttgccca tattgatcta attgttcgcc acaaatcttg ataaacgtct cagaaatctg
     5821 accgcttgca agtgatgagt taagaaaact agctacttgc tcatcgttag cgacggcggc
     5881 agaaaaagtt aacatctgct gccattgttc caattgacct tgttctaaag caaaatcgaa
     5941 agccgcttta gcataggggc gagctactgt gcttaattct gacatctgcc cctcctagtt
     6001 atagttccgc aactagctta tcaataatat cgttgttcgc agcggcatcc accgaacgac
     6061 ccacgatttt ttctgcacca gcaatagcca atgcagccac tttttgacga agctcttctt
     6121 gaacgcgttt acgttcgctt tcaacttccg cgtaaccctg ttcaataata cgttgacgtt
     6181 ccacttcagc ttctgcttgt acagattcta aaatttcatt acgacgtttt gttgctaaat
     6241 caatgatatt ttgtgcttct tctttcgctc taaggatttc ttgatccgca gccgctttag
     6301 aatcagcttg ttcttgtttc gctttttcgg cagaagccaa tgcgctagca atatttgcct
     6361 gacgctcttc tatcactcga attagcggtg gccatacaaa cttcatacag aacgcaacaa
     6421 aaagtgcgaa cgcaatcagt tgaccaatta gtgttgcatt taaattcaca acgccctcct
     6481 aaaagccggt aaagttattc aactgaataa cggttaatca aatcccgact tatttcaata
     6541 aatcaatgaa cgggtttgcg aagatgaata gtaatgaaat acctacagcg atcattgcga
     6601 tagcatctaa aagaccagca acgataaaca ttttagtttg taagcttgat gctaattccg
     6661 gctgacgtgc agatgactct aagaatttgc cacctaagat agcaaagccg atagcagtac
     6721 caagagcagc gaaagctaat aaaattgaag caccaataat tgttgctgtg attactgatt
     6781 ccataatgtt ctccattaga ttgaggaatt agcccgaagg ctgggttgtt gataaaaata
     6841 catatcaagc ggtcaatatt ttgcaaaaat ttgcgaaaaa cctaccgctt gtaaggctag
     6901 tttaatgatc cgctttgtta taagcgatac tcaaataaac aatcgttagc atcataaaaa
     6961 taaaggcttg aagcgtaata actaaaatat ggaaaatcgc ccaaaccaag tgtaatggaa
     7021 tccccaacgc ctgtagagcg aagttgtctg ccatatacat tactgcaata aggataaaga
     7081 ttaactcacc tgcatacata ttaccgaata aacggaacgc caatgaaatc ggttttgcca
     7141 aaagcgttac cgtttcaaga ataaagttta ccggaatgaa tgcccagtgg ttaaacgggt
     7201 gtaacgtgta ttctttcact aaaccgccaa aacctttcga tttcaccgtg taaaataaaa
     7261 ttaacgcaaa tacacaaata gacataccca gtgttgcact aatatctgcc gttggtactg
     7321 cacgcaaata gtgaatacca aacagattgg ctaactgtgg taagaaatcg accgggataa
     7381 ggtcgatcgc attcataata aacacccaac agaaaatcgt taatgctaat ggtgcaatta
     7441 cattgcgagg tccgtggaag ttatccttca ctaaaccgtt tacccactca ataacaatct
     7501 caacaaaaca ttgcaatttt cccggaacgc ccgttgttgc attttttgct acacgcgaga
     7561 acacccataa aaaaatcgca cctgccacta aagagaagaa cagtgtatct aaatgcactg
     7621 cccaaaagcc ttcacctgtc gataaaaaac tcaagtgatg gctaatatat tctgctgtcg
     7681 ttccagccat aacatatcct tttaaattaa aattagtggt gatgtttgct taatacaaac
     7741 gggatcatat tatttaaaaa taatgcgata aaataaccca cgaaaaacaa cacaacatct
     7801 agagcaggga taagtttaaa acagccgatc accaaaataa tagtaaccaa ccatttcatt
     7861 ccttcaccac gatagaaagc ggtcattttt gactgatttt ttgcagattt cttaaagaaa
     7921 acccaatata caaacacaag atgaggcaaa aaactcgcta aagcaccgcc tagaaaggaa
     7981 aaattaaaat tcattttcca taaagacact ccaagtgcaa aaacgcacaa gagaaaaaat
     8041 tcaaccttta atgcttgttt atattgtgat tttgctctat tgattacagc tgacacattt
     8101 tatccttttt gaataagtaa accacacaat caggctaata attagccact gttgaatcaa
     8161 agaaaatccg tgctaaatta tactttacaa atgaattgtt gcaaccgaaa agcgacacaa
     8221 aaacttgtta ttcttcacat ttttgaaaaa aaattttatt tacgttgcat ttttttgagt
     8281 aaaaccatca aaatcagtta acaaaaaaac aacaaataga ggtgtgtgta tttttctctg
     8341 tcacattatt tc
//
LOCUS       DANLXO010000107         8351 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.107, whole genome shotgun sequence.
ACCESSION   DANLXO010000107 DANLXO010000000
VERSION     DANLXO010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8351
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.107"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            31..567
                     /gene="proQ"
                     /locus_tag="PXD69_002219"
     CDS             31..567
                     /gene="proQ"
                     /locus_tag="PXD69_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HDL6284372.1"
                     /translation="MSEQIEQKVEQTQNKTNPSTKEVIAYLAEKFPLCFTLEGEVKPL
                     KVGLFQELAEALKDDEKISKTLLRQVLRNYTNSWRYLAASQANVARVGLQGEEVGVVT
                     EDEATHAAEALAAAKAVVAERKAQERKAQRKEYFKQKAREENAKKRAEFKAKKAIDNL
                     PKASEEKLAALADKFGRK"
     gene            653..2665
                     /gene="prc"
                     /locus_tag="PXD69_002220"
     CDS             653..2665
                     /gene="prc"
                     /locus_tag="PXD69_002220"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HDL6284373.1"
                     /translation="MKLTRLNKIFALALGLMIGNAFAVQPDIKESAIVMPKPNEQHSL
                     STKRVTARLTQSHYHKFQLNDEFAGKIFNRYVDWLDPSHNTFLQADIDEMRSKYATTL
                     DDDLYAGKLDAAFAMYELMSKRRYERYSYALSLLDKEPDLKGNDEIEIDREKAAFPKS
                     VEEANTLWEQRVKNDIINLYLKDKKWPEIKKTLTKRYNFAIKRLTQVKADDILQTYLN
                     SFSREIDPHTSYLSPRAAKAFQESMNLSLEGIGATLTQEDDVTSIRALVPGAPAAKSK
                     KLVVGDKIVGVGQGERGEIEDVIGWRLDNVVDKIKGKKGTKVRLEIEPEKGGKTKIIT
                     LVRDKVRIEDSAAKLTVEKVDGKNVGVIKIPTFYIGLTSDVRKLLTQIEKKNVEGLII
                     DLRENGGGSLTEVIELTGLFIKDGPVVQVQDAFNRIKVHEDPESKSVYDGKVMVMINR
                     HSASASEIFAAAMQDYNRAIIVGQQTFGKGTVQQSRSLNFVYDLDQEPLGFIQYTIQK
                     FYRINGGSTQLKGVEADIKFPEIINAAKTGESFEDNALPWDKIPAANYKEAGNARNAV
                     AALTAKHQERIAKNPEFIVLNENIAIRKERDERKFLSLNLEERLKENKADESKRLKDI
                     NARFAREGKKALKDIDDLPKDYEAPDFFLKEAEQMMLDWSEFDKKS"
     gene            2783..4288
                     /locus_tag="PXD69_002221"
     CDS             2783..4288
                     /locus_tag="PXD69_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HDL6284374.1"
                     /translation="MVAFSGMALAETATVAQVASEPVVQDNILPQLSFAAQQARAAEL
                     VKQADYALEQEQIRQEQARKFAEAEARIKQEIGNNALLLSQATTKVYLDSEFATMWND
                     KAAEKAFLKEYALFAVSGVSSKSAKALQQILNQPEGLGRDILLTDGFLDYLYYNKNVF
                     KNANNWLYNLGSYVPKSPSSEQIFQWTNAVREGDSGQFVTDLVPRNHLYRDTAQRVLA
                     MAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNGIFVNIPSYQLY
                     YFRDGNLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPG
                     YADRASFEILDSSGNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSD
                     AIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEAGWGSDKKNQVLGSKKTT
                     SAQIRSDNPVYLYYVTAWVEGGKVQTLPDIYNFDAKIPQHSVNWGKLKSII"
     gene            4458..5012
                     /locus_tag="PXD69_002222"
     CDS             4458..5012
                     /locus_tag="PXD69_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HDL6284375.1"
                     /translation="MKQINVQRRKWLSLGGLVLGASLLPGQVMAALSTPAPAALRFRN
                     VNTGDTYTAKFGAGGLNKTDLSQLNYLMRDRHINQVKAIDPKLFVKLNQLQRRLGFHN
                     AEILVLSGYRSAQTNARLRRRSRGVASHSYHILGQAVDFQVSGVPLYKVKQAAESLNN
                     GGVGYYPRSNFVHVDTGPVRTWRG"
     gene            5029..5658
                     /locus_tag="PXD69_002223"
     CDS             5029..5658
                     /locus_tag="PXD69_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6284376.1"
                     /translation="MFNLQIIPVSPFQQNCTVIWDENKNAAIIDGGDNAEGIIQFVES
                     QQLKVQKLLITHGHLDHIMAVEKLREHFQVEVFGSHLADKPLFERLPEMCQQFGLPPV
                     NGFLPDHWLEEGDRVEVGELSYTVRHLPGHAPGHIGFFDFDNRIAFSGDVLFQNSIGR
                     TDLYLGNHSQLLETIREKMFDLDDDFIIIPGHGPHTTIGREKQTNPFLK"
     gene            complement(5693..6064)
                     /locus_tag="PXD69_002224"
     CDS             complement(5693..6064)
                     /locus_tag="PXD69_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDL6284377.1"
                     /translation="MRISYFAFAIFSIFLTACGSKPVSYLPTGSEPIVNIESDIAEKI
                     ELETNSKQFSTTNLTEFPLNLTYKLFWYNKDGVTQSHNGISDSIGWQHLWLQPKQKQT
                     IALIKPTEESHNYRLYLRGVK"
     gene            complement(6067..6426)
                     /locus_tag="PXD69_002225"
     CDS             complement(6067..6426)
                     /locus_tag="PXD69_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDL6284378.1"
                     /translation="MTTEYQKTIFTKIINKEIPANIVYQDELVTAFRDIAPQAPTHIL
                     IIPNKFIPTVNHVSNEDELALGRLFTVAAKLAQEEGIAEEGYRLVMNCNKNGGQEVFH
                     IHMHLLGGQKLGPLVAK"
     gene            complement(6439..7038)
                     /gene="rnhB"
                     /locus_tag="PXD69_002226"
     CDS             complement(6439..7038)
                     /gene="rnhB"
                     /locus_tag="PXD69_002226"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDL6284379.1"
                     /translation="MMNEFIYPNARLIAGVDEVGRGPLVGAVVTAAVILDPNNPIQGL
                     TDSKKLSEKKRQALAEEIKAKALSWSLGRAEPTEIDELNILNATMLAMQRAVAGLHIQ
                     PDFVLIDGNRPPKLPMPAQAVVKGDSLVAEISAASIIAKVARDQEMDELDQQFPQYGF
                     AQHKGYPTKLHFEKLAEFGATPYHRKSFAPVRKVLGLID"
     gene            complement(7035..8072)
                     /gene="rsgA"
                     /locus_tag="PXD69_002227"
     CDS             complement(7035..8072)
                     /gene="rsgA"
                     /locus_tag="PXD69_002227"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HDL6284380.1"
                     /translation="MSKPKLTHNQQRRIQSNHHKRINKKEIEWQDEMLGEMQQGIVVT
                     RHVKHADVETAEGQIFRCNIRRTLKNVVVGDQVSWRKGSEQLQGISGVIEAVFPRKNE
                     LTRPDYYDGIKVMASNIDQIIIVSAVLPTLSLNIIDRYLVICETANIPALIVLNKIDL
                     LNESERQAVKEQLKIYEEIGYETLCLSADTGENMQALHQYLAKGTSIFVGQSGVGKSS
                     LINQLLPEVNALTGSVSDNSGLGQHTTTASRLYHLPQGGQLIDSPGIREFGLWHLEPE
                     QITLGYREFQSVLGTCKFRDCKHKTDPGCALRQEVENGEISAIRFENYHRLIESLSET
                     KSQRHFRKEEV"
BASE COUNT         2578 a         1485 c         1806 g         2482 t
ORIGIN      
        1 ttattagatt tttattaaat aggacttatt atgtcagagc aaattgagca aaaagtagaa
       61 caaactcaga ataaaaccaa tccaagtacc aaggaagtga ttgcttattt agcggagaaa
      121 tttccgcttt gtttcacgct tgaaggtgaa gtaaaaccat tgaaagttgg gttgtttcag
      181 gaattagctg aagcattaaa agatgatgag aaaatcagta aaacgttatt gcgccaagta
      241 ttgcggaatt acactaattc ttggcgttac ttggctgcca gccaagctaa tgttgctcgt
      301 gtcggcttac agggtgaaga agttggcgtg gtaacagaag acgaagctac tcacgccgca
      361 gaagctttgg ctgctgcgaa agcggtggtt gcagaacgta aagcacaaga gcgtaaagca
      421 caacgtaaag agtacttcaa acagaaagca cgtgaagaaa atgcgaaaaa gcgtgcagaa
      481 tttaaggcga aaaaagcaat agataattta cctaaagctt cagaagaaaa attagctgca
      541 ttagcagata aattcggtcg taaatagttt tcaagtcgct ttgtgcttac aagcggtcgg
      601 attttagtaa aattttgcaa aaaaatgacc gcttgattat ttggaaaaga agatgaaatt
      661 aacaagatta aataaaattt ttgccctagc cctaggttta atgataggaa acgcttttgc
      721 cgttcagccg gacattaaag aaagtgcgat tgtgatgcca aaacctaatg agcagcatag
      781 cttatcaacc aagcgtgtaa cagcccgatt aactcaatcg cattatcata aatttcaact
      841 gaatgatgag tttgcaggga agatttttaa ccgctatgtc gattggcttg atccttctca
      901 taatactttt cttcaagccg atattgatga aatgcgtagt aaatatgcta caacattaga
      961 tgatgattta tatgctggta aattagatgc agcatttgca atgtatgagt taatgtctaa
     1021 acgtcgttat gagcgttata gctatgcctt atctttacta gataaagagc ctgacttaaa
     1081 agggaatgat gaaattgaga ttgaccgtga gaaggccgca tttccaaaaa gtgtagaaga
     1141 ggcaaataca ctttgggagc agcgagttaa aaacgatatt atcaatttat atcttaaaga
     1201 taaaaaatgg cctgaaatta agaaaacact cactaaacgt tataactttg cgattaagcg
     1261 tttaactcaa gttaaggctg atgatatttt acaaacttac ttaaattcat tctctcgtga
     1321 gatcgatccc cacactagct atttgtctcc tcgtgcggca aaagcgttcc aagagagcat
     1381 gaatctgtcg ctagaaggaa ttggtgcaac gctaacccaa gaagatgatg taaccagcat
     1441 tagagcatta gtgccaggag cccctgccgc taaaagtaag aagctggtag tcggcgataa
     1501 aattgtcggt gtaggtcaag gtgagagagg tgagattgaa gatgttatcg gttggcgttt
     1561 ggataatgta gtcgataaaa tcaaaggtaa aaaaggcact aaagttcgtt tagaaattga
     1621 gcctgaaaaa ggtggaaaaa ctaaaattat tacccttgtg cgtgataaag ttcgtattga
     1681 ggatagtgct gctaaattaa cggtagaaaa agtagatgga aaaaatgtag gggtaattaa
     1741 gatccctact ttttatatcg gtttgacttc agatgtacgt aaattactta ctcaaataga
     1801 gaaaaaaaat gttgaaggat tgatcattga tttacgtgaa aacggtggtg gttcgttaac
     1861 tgaagtgatt gaattaactg gtttatttat taaagatggg cctgtagtgc aagtacaaga
     1921 cgcattcaat cgtatcaaag tacacgaaga tccagaatca aaatcagttt atgatggaaa
     1981 agtgatggtg atgattaatc gccatagtgc ttcagcctct gaaatcttcg ctgcggcaat
     2041 gcaagattac aaccgtgcaa ttattgtagg gcaacaaacc tttggtaagg gaactgttca
     2101 acagagccgt tcattgaatt ttgtatatga tttggatcaa gagcctcttg gttttatcca
     2161 atatacgatt caaaaattct accgtatcaa tggtggaagt acccagctaa aaggggttga
     2221 ggcggatatt aaattcccgg aaatcattaa tgctgcaaaa acaggtgaaa gttttgaaga
     2281 taatgcgctt ccttgggata aaattccagc agctaattat aaagaggctg ggaatgctcg
     2341 taacgcggtt gctgcattaa cagcgaaaca tcaagagcgt attgctaaaa acccagagtt
     2401 tatagtatta aacgagaata ttgcgattcg aaaagaacgt gatgagcgta agtttttatc
     2461 gttaaattta gaagaacgcc tgaaagaaaa taaagcagat gaaagcaagc gcttaaaaga
     2521 tattaatgct cgttttgccc gtgaaggcaa aaaagcatta aaagatattg atgatttacc
     2581 aaaagactat gaagcaccgg actttttctt aaaagaagct gaacagatga tgcttgattg
     2641 gtcagaattt gataaaaaat cataaatgtg tttataatgc gcacataacg taccgcttag
     2701 ctccgctaag cggtttattt ttttataaat ttgcaaatat taagaggaag agtgggtgaa
     2761 aacctttaaa ttattaccta ttatggtggc gttttctggc atggctttgg ctgaaacagc
     2821 cacagttgct caggtggctt ctgagcctgt tgtacaagat aatattttac cacaattaag
     2881 ttttgcagct cagcaggctc gtgctgcaga attggtaaaa caggccgatt atgcgttaga
     2941 acaggaacaa attcgtcaag agcaagcaag aaaatttgca gaagcggaag caagaattaa
     3001 gcaagaaata ggtaataatg ccttattgct gagccaagca acaactaagg tttatttaga
     3061 cagtgaattt gcgacaatgt ggaatgataa agccgcagaa aaagcatttt tgaaagaata
     3121 tgcattattt gcagtaagtg gggtatcctc taaatcagct aaggcattgc agcaaatctt
     3181 aaatcaaccg gaaggtttag gtagagatat tttattaact gatggcttct tagattattt
     3241 gtattacaac aaaaatgtgt ttaaaaatgc aaataattgg ttatataact taggcagtta
     3301 tgtaccaaaa tcgccctctt cagagcaaat cttccaatgg actaatgccg tgagggaagg
     3361 cgattctggg cagtttgtaa cagaccttgt tccaagaaac catttatatc gtgatacggc
     3421 acagagagta ttggcaatgg caggaggctc ttcagcacct aaagccaaaa aaggtaaagc
     3481 tgttacggag gtagctggtg gcggtaatgg ggcttctttc tataaattag cgctcaatgc
     3541 tcaacgttta cgtattattc caagttttaa caatggaatt tttgtgaata tcccaagcta
     3601 tcaattatat tatttccgtg atggtaattt agctcttcaa tctaaagtga ttgttgggcg
     3661 agaagatcgc cgtacaccgg taatgtatag taagctgagc aatgtggtag tgaatccacc
     3721 ttggaatgta ccgactagta ttatgactaa agatattatt cctaaactag cgcgtgaccc
     3781 aggttatgca gatcgtgcta gtttcgaaat tcttgatagt agtggcaata aaattaatcc
     3841 gcgtagcgta aattggtcac aatatttaaa tgctaaaagt tcaccatacc gtattcgcca
     3901 gaaagcaggt gatgatagcg ctttaggacg ttataaattt aatatgccaa gttcggatgc
     3961 aatttatttg catgatacgc caaatagagg attatttggt aaaacggggc gtgcgttaag
     4021 ttctggttgt gtccgtgtag aaaaatctga tgaattggca accattttat taaaagaagc
     4081 gggttgggga tctgataaaa agaatcaagt cttaggcagt aagaagacga cctcggctca
     4141 gattcgttca gataacccgg tttatctcta ttatgtgacg gcttgggttg aaggtggaaa
     4201 agtgcaaacc cttccggaca tttataactt tgatgccaaa atcccacaac attctgtgaa
     4261 ttggggaaaa ttaaagagca ttatttaatc gtgctatttc tgataaattc caagaagata
     4321 tcatcttctt ggaacttttt gaaaatatag cttacataaa tttacgattg taaattttta
     4381 ctttaagtat ggtgtataga aattcgctca tttgtgagtg attttctata aatcattagc
     4441 taacctatga ggaaaaaatg aaacaaatta atgttcaacg ccgtaagtgg ctatcactcg
     4501 gcggacttgt tttaggggct agccttctgc cgggtcaagt aatggcagcg ctttctactc
     4561 ctgccccagc tgcgttacgt tttcgtaatg tgaatacagg cgatacttac actgctaaat
     4621 ttggtgcagg tggattaaat aaaaccgatt taagccagtt aaactattta atgcgggatc
     4681 gtcatatcaa tcaagttaaa gcaattgatc caaaattatt tgtcaaattg aatcaattac
     4741 aacgccgttt aggtttccat aatgcggaaa tcctagtatt aagtggctat cgctccgcac
     4801 aaacaaatgc aagacttcgt cgtagaagcc gtggtgttgc cagccatagt taccatattc
     4861 ttgggcaagc agtagatttc caagtatcag gtgtgccgtt atataaagta aaacaagcgg
     4921 ctgagagctt gaataatggt ggcgtaggtt attatcctcg tagtaacttt gttcacgtag
     4981 atactggccc agttcgcact tggagaggct aacaagcggt cttattttat gtttaatttg
     5041 caaattattc ctgttagtcc atttcaacaa aattgcacgg tgatttggga cgaaaataag
     5101 aatgcggcta ttattgatgg cggcgataat gccgaaggca ttattcaatt tgttgaatct
     5161 cagcagctta aggttcagaa attattgatt acgcacggtc atttagatca tattatggcg
     5221 gtggaaaagt tgagagagca ttttcaagta gaggttttcg gctcgcatct tgcagataaa
     5281 cctttatttg aacgtttgcc ggaaatgtgc caacaatttg gattaccacc agtaaatggc
     5341 tttttgccgg atcattggtt ggaggaaggt gatcgggtcg aagtcggcga gctgagctat
     5401 accgttcgac atttgccggg tcatgctccg ggtcatatcg gtttttttga ttttgacaat
     5461 cgtattgctt ttagtggcga tgttttattc caaaatagca taggtcgaac agatctctat
     5521 ttaggcaacc atagccagtt attggaaacg atcagggaaa aaatgtttga tttagatgat
     5581 gatttcatca tcataccggg acatggtcca cacacaacta tcgggcggga aaaacagacc
     5641 aacccgtttt tgaaataaat aaagaagcag agcagttggc tctgcttttt tgctatttta
     5701 cgcctcgtaa atagaggcgg taattatggc tttcttccgt cggtttaatg agtgcaatgg
     5761 tctgtttttg cttaggttgc aaccatagat gttgccagcc gatactatct gatataccgt
     5821 tatgggattg tgttacccca tctttattat accaaaataa tttataagta agattaagcg
     5881 gaaattcagt taaatttgtg gtgctaaatt gcttgctatt cgtttccagc tctatctttt
     5941 cagcaatgtc agactcaata ttgacaatag gctctgagcc ggttggtaaa tagctgacag
     6001 gtttgctacc acaagcggtc aaaaaaatcg aaaaaattgc aaatgcaaag taggaaatac
     6061 gcatagttat tttgccacta aaggtcctag tttttgtccg cctaacaagt gcatatgaat
     6121 atggaacact tcctgcccgc cgtttttatt acaattcatc actaagcgat agccttcttc
     6181 ggcaatgcct tcttcttggg ctaattttgc cgccaccgta aataaacgcc ctagggctaa
     6241 ttcatcttca ttactcacgt gattgacggt tggaataaat ttattcggaa taatcaaaat
     6301 atgcgtgggt gcttgtggag caatatcacg aaatgcggtc acaagttcat cttgatagac
     6361 aatatttgcc ggaatttctt tattgatgat tttggtgaaa atcgtttttt ggtactctgt
     6421 agtcattgtg ttttccttct aatcgattaa acctaatact tttcttacag gggcaaaact
     6481 cttacgatga taaggtgttg ccccaaattc tgctaatttt tcaaaatgga gtttagtcgg
     6541 gtagcctttg tgctgtgcga agccgtattg cggaaattgt tggtctaatt cgtccatttc
     6601 ttgatctcgg gcgactttgg caataatcga agcagcactg atttcagcca ctaagctgtc
     6661 tcctttcacc accgcttgtg ccggcattgg cagttttggc ggacgattgc cgtcaattag
     6721 cacaaaatcc ggctgaatat gcaagccggc aaccgcacgt tgcattgcca acattgtcgc
     6781 atttaaaata ttcagctcat caatttctgt cggctcggca cgtcctagcg accagctcag
     6841 agccttggct ttaatctctt ctgccaaagc ttggcgtttt ttctcggata attttttgga
     6901 atcggttaag ccctgaatcg ggttattcgg atctaaaatc acggctgcgg tcacaaccgc
     6961 tccgactaaa ggtcctcgtc cgacttcgtc aacaccggcg attaatcggg cgttagggta
     7021 aataaattca ttcattatac ttcttctttt ctgaaatggc gttggctttt ggtttcagac
     7081 aggctttcaa ttaagcgatg gtaattttca aaccgaattg cagaaatttc gccattttcg
     7141 acctcttgtc ttaaggcaca acccgggtcg gttttgtgtt tgcaatcacg gaatttgcac
     7201 gtgcctaaaa ccgattgaaa ttctcgatag cctaaggtga tttgctcagg ttctaaatgc
     7261 cataagccaa attctcgaat gcccggcgag tcaatcagct gtccgccttg cggtaaatgg
     7321 tataagcgag aggcagtggt ggtgtgctga cctaaccctg agttatcgct cactgagcca
     7381 gtgagagcat tgacttcagg taacagttgg ttaattaggc tggatttccc cacgccggat
     7441 tgtccgacaa aaatagacgt acctttagca agatattggt gtaacgcctg catattttca
     7501 cccgtatcag ccgataaaca tagggtttca tagccaatct cttcatagat tttgagctgc
     7561 tctttaactg cttgccgttc gctttcgttt aataaatcaa ttttgtttag cacgattaag
     7621 gcaggaatat tcgccgtttc gcaaatcact aaataacggt cgataatatt cagcgaaagt
     7681 gtaggtagca cagctgatac aataatgatt tgatcgatgt tcgatgccat caccttaata
     7741 ccgtcataat aatcggggcg ggtaagttca tttttacgtg ggaagacggc ttcaatgacc
     7801 ccactaatcc cttgtagttg ctcactacct ttacgccaag aaacctgatc gcccaccact
     7861 acatttttca atgtacggcg gatattacag cggaaaattt gcccctctgc ggtttcaaca
     7921 tcagcgtgtt taacgtggcg agtaacgacg atgccctgtt gcatttctcc taacatttca
     7981 tcttgccatt caatctcttt tttgttgata cgcttatgat ggttagattg gattctacgc
     8041 tgttggttat gggttaattt cggtttactc aaaagaactc tcggtaatta ttgcaaatga
     8101 aaaataggct ttagcatact ataaaacctc tttttataat agattaaagt gaaagaataa
     8161 aaaagcagaa aggctagaat aaaggtagcg aataatatag aatgcgatct aggttttgtg
     8221 ctgttttttt acatagaaaa aaaccgccca aagtgggcgg ttataaacca atacggttca
     8281 aaatatacag gaagtgaaac aagtaacttt cgttactcta gtctagtttc ctagaccaat
     8341 atgcaaacac a
//
LOCUS       DANLXO010000108         8331 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.108, whole genome shotgun sequence.
ACCESSION   DANLXO010000108 DANLXO010000000
VERSION     DANLXO010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8331
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.108"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            111..692
                     /locus_tag="PXD69_002228"
                     /pseudo
     CDS             111..692
                     /locus_tag="PXD69_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252416.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
     gene            693..863
                     /locus_tag="PXD69_002229"
     CDS             693..863
                     /locus_tag="PXD69_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL6284381.1"
                     /translation="MLKCKQITELVSLSQEQKLTLKQRVNVQVHLMLCSRCRAFSQNC
                     KTVDKLMKEFNS"
     gene            complement(1001..2056)
                     /locus_tag="PXD69_002230"
     CDS             complement(1001..2056)
                     /locus_tag="PXD69_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6284382.1"
                     /translation="MGRPRKQQNRYLPENLRPKTVTRKSGKTVIYWLYRTHGKTEISL
                     GTNRNEAFIKAAQLNIERESQTARITFGLVAKRYRDEVIPQKKASTAQTDLCKIKNLL
                     LFFNDAPLEEITPQHIREYMTWRKDTPGSANNEFSMFSHIWQYAREWGYTNLPSPNIG
                     MKRYPIRKREIYVENNIFQMVYEVADQDMRDLMDLAYITGQRPVDLVNIRKEHIFDGY
                     LHIVQQKTQAKLRIEIVGKLADIIQDRLEKATGTHLFSTKKGEKLTARKLGKRFTYIR
                     EQAVKNNPEYANEIMAFQFRDLRAKSGTDKALSLGEEAARQQLGHTSVQMTKTYIRKA
                     PIVTPIKESVPSSKHQS"
     gene            complement(2016..2291)
                     /locus_tag="PXD69_002231"
     CDS             complement(2016..2291)
                     /locus_tag="PXD69_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL6284383.1"
                     /translation="MEQPTEFLTKDELADLTGYRQKKRQIEWLRERHYIIQDENKYKP
                     LVLYKDVYGHPRQQYPEAQSTGKWKSPAYLMGVKNGKTTQTTESLLT"
     gene            complement(2381..2887)
                     /locus_tag="PXD69_002232"
     CDS             complement(2381..2887)
                     /locus_tag="PXD69_002232"
                     /inference="COORDINATES: protein motif:HMM:NF024784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDL6284384.1"
                     /translation="MRILPRNENYAATENGEIFSFLSNKILKPRPLKNGYLRVQLVDE
                     NGVKDYLIHRLVCETFHGYPDLHVNHKDRDKTNNRPENLEWCTRSENMLHCSRLGGFS
                     KQSERMKKMNIESCSVPVAAITLDGKLFKKYTSMTSAGKDGFSHSKISLCIQGKRKTH
                     KGYIWQKL"
     gene            complement(2865..3461)
                     /locus_tag="PXD69_002233"
     CDS             complement(2865..3461)
                     /locus_tag="PXD69_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL6284385.1"
                     /translation="MPLSITANLTKAVQLKHQGEALSGGSETLVVHGTQDPIISQNKA
                     HCLGRNNGQENVLFEVKGAEAVRISEIQDKTPTLKARMGTGGNNIPCIALAGNTIGRQ
                     PQNDGNGNVFDESGVSYMLTRTDVHAVSAGTTIRKLTPTECERLQGFPDGWTKITYRG
                     KSAEECPDSPRYKAIGNSMCTNVMKWIGERLSAYLTSQ"
     gene            complement(3382..4701)
                     /locus_tag="PXD69_002234"
     CDS             complement(3382..4701)
                     /locus_tag="PXD69_002234"
                     /inference="COORDINATES: protein motif:HMM:NF024795.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HDL6284386.1"
                     /translation="MNNIIKFTYGSICSGIEAASVAWHDIGTPLWFSEIEPFPCAVLA
                     HRFPDVPNLGDMTALPEKILNRKIPAPDVLVGGTPCFTAGHMVLTDKGYMPIETLSVG
                     DLVVTHKGQLKPILRVGSEIKPVGKLTAVGLPESIVCTPEHPFYAQKWQTINTKRNGK
                     YHRKTIISKPEWIEAHKLEGYQWVSLTDFSVMPYGGFHSKLTDDEVLLIAGYYLGDGW
                     IRRWKGKNKKAVVISVNKEKYRKFSLSFAKLPHHITTENNSVIKITICDTELADFLYS
                     QFGEKAGGKTIPAWCLSHSFRSKIFEGYMITDGSFRNGVYTANSISKSLAYGIAALSQ
                     TLGYISSVSKVTVAPTKEIQGRIVNQNDYYQMRAFLQSTSRKSRLDENRLLRSVQSFE
                     ITGNEVVYNIEVADDNSYILNNAVVHNCQSDKGGTVKASGGGFEWRE"
     gene            complement(4698..5603)
                     /locus_tag="PXD69_002235"
     CDS             complement(4698..5603)
                     /locus_tag="PXD69_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL6284387.1"
                     /translation="MQFQEHNNRKKADKFAEYITGEALRRYVAEKVKQYARNNVSVFD
                     GAAGSGQLEQFVRPTSFTAVEVQSESCDVLRHNFPTAQIYNQSFFLYPNGEPCDCVIM
                     NPPFSLKFKDLSQAEQAQIQSEFPWKKSGVVDDIFVLKGLANSHQWGFFILFPGVGYR
                     QTEKRFREEVGNQLVELNRIQNAFEDTPIEVLFLVVDKTKTTDDCSRELIDCAGGQIQ
                     QICADKWKIRPDHWESIQPPPPPQEEIKPLELEAFAREQAIERIVGEVRLSKLIAEFF
                     EPELRRTFNAFIDDICVAVQAEKIV"
     gene            complement(5837..6514)
                     /locus_tag="PXD69_002236"
     CDS             complement(5837..6514)
                     /locus_tag="PXD69_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL6284388.1"
                     /translation="MSNQVQFPVFNFNSSAVRVIIDPNQEPWFCGADVCRILGYVNES
                     LTLQKHCKENGVSKRYLTDKMQRQQKAIFINEPNLYRLIIKSRKPEAEKFEAWVFEEV
                     LPQIRKTGKYALQNNQQNLPLAPPPKKYSFDFTEDELQSLIWAWFAFVRGIHTFRYIY
                     PMFQKLGSNIAPEIYGQGFEYSHTAQSAHKILERITKEFDYDPMTNWRVLKHVRGFDP
                     AFKKPTF"
     gene            complement(6762..7601)
                     /locus_tag="PXD69_002237"
     CDS             complement(6762..7601)
                     /locus_tag="PXD69_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HDL6284389.1"
                     /translation="MANSVMIVQGVEVKVTARDGEDYISLTDMCKAFGDSDQLIKNWL
                     QNKNTIEFLQVWEELNNPNFNLVELHQIKNNIGLNRFVMSVKKWTATGAIGLVAKAGR
                     YGSGTYAHKDIALEFGSWLSPEFKLYLIKEFQRLKQQEANESKLEWSVKRILSKANYR
                     IHTDAIKAHIIPALLNTKQHTFVYSSEADILNQALFGQTAKQWKDRNPNLKGNMRDHA
                     TVEQLTVLAALESQNALLIEQGYSQEERLAMLNRLAIQQMSSLLQTRAIEELKEKPLL
                     IEE"
     gene            7831..8208
                     /locus_tag="PXD69_002238"
     CDS             7831..8208
                     /locus_tag="PXD69_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284390.1"
                     /translation="MFSLLRDALTFAAMFTGILFPAIIHKYDLSLGTQIQLLSFVPAF
                     FVLCHFLIKRKYQRDFDRLSYLSAVVCVAMCAGVGAFSQSEMIELGFKVERVLDYVTI
                     KFLLYFWSLLLLPVVLRKLFGKD"
BASE COUNT         2225 a         1654 c         1708 g         2744 t
ORIGIN      
        1 atgttaggtt taaaaatact tcataccaat atcccctaag ttgggtaaaa ccttatgaaa
       61 taggatacaa gcggttagtt tctctcaatt ttttaccaaa ggatcacgca atgagccaac
      121 cggctttacg gcaaatttcc ccctcgcagc tagaagatat tcgtctgcaa atggtgaagt
      181 ttgccttttt acagttaaaa aataacgaac ttgccgaaga tgtggtgcaa gaggcgtttg
      241 tcagcgctta taaatatgcc gacagcttca aaggtgaaag tgcgttaaaa acgtagattt
      301 ttgcaatttt aaaaaacaag atcgtagatt tagtgaaagc caaaggcaaa ttggtggcag
      361 tatctgagct gatggaagaa gacgatcacg atcttgccga taaattgttt aacgaaaatg
      421 gcggttggga taaagatgct tatcaatcta atgagtggaa gaacaccgaa agccatacct
      481 attccgctca attctggcaa gtatttgaat tttgcctaaa taatctgccg gcaaatcaag
      541 caagggtgtt tatgatgcgt tcccatttgg aaatggaaac cgaagaaatt tgcgcagaat
      601 gtgagatttc accagcaaat gtgcatacct tactgtatcg ggcaagattg cagttacagg
      661 tctgtttaag tcaaaaatgg tttggaggtt aaatgttaaa atgtaagcaa attaccgaat
      721 tagtttctct gtcccaagaa caaaaactga cattaaaaca acgtgttaat gtgcaagttc
      781 atttaatgct ttgttctcgt tgcagagcct ttagccaaaa ctgcaaaacc gtagataagc
      841 taatgaaaga atttaactct tagcgtaaaa gcaagcggta aaatttttaa taaatattat
      901 cagtaataac gagtaacaaa aattacttat ctttcaatct attataagtg atttttatgt
      961 aaacgttccg aaaaaatgca aaatgttccg aaactgtctt ttaagactgg tgttttgagg
     1021 agggaacact ttctttgata ggggttacta ttggggcttt tcgaatgtat gttttggtca
     1081 tttgaacgct agtatgacct agttgttggc gagcggcttc ttcacctaga gaaagggctt
     1141 tatctgttcc tgatttagct cttagatccc gaaattggaa tgccattatt tcatttgcgt
     1201 attccgggtt attcttgacc gcttgttccc gaatataagt gaacctttta cctagttttc
     1261 tagcggttag cttttcccct ttcttagtgc tgaataagtg tgttccagta gctttctcca
     1321 gcctatcttg gataatatca gccagttttc ccactatctc aatacgtagt ttggcttgtg
     1381 ttttttgctg aacaatatgg agataaccat caaaaatgtg ttctttccgg atattgacca
     1441 aatcgacagg acgttgtccg gtgatatagg cgagatccat taagtctctc atatcctgat
     1501 ctgccacttc atataccatc tgaaatatat tgttctcaac gtaaatttca cgctttctga
     1561 tagggtagcg tttcattccg atattagggc ttggtaagtt tgtataaccc cactctcgag
     1621 cgtattgcca aatatgactg aacattgaaa attcgttatt agcagatccc ggtgtgtctt
     1681 ttcgccaagt catatactct cggatatgtt gaggggtgat ttcttcgaga ggagcgtcat
     1741 taaagaatag cagtagattt tttatcttgc acaaatctgt ttgtgctgtg ctcgcttttt
     1801 tctgaggtat aacttcatct cgataacgtt tggctacaag cccgaaggta attctggcag
     1861 tttggctttc tctttctata ttgagttgag cagccttaat aaaagcctca tttctatttg
     1921 tgcctagaga gatttccgtt tttccgtgcg tgcgatatag ccaataaatg acagttttgc
     1981 ctgattttcg tgtaactgtt tttggacgta aattctcagg taagtagcga ttctgttgtt
     2041 tgcgtggtct tcccattttt cactcccatt aaataagcag gtgatttcca tttcccagtg
     2101 gattgagctt ctggatattg ttggcggggg tgcccataga catctttgta tagcactaat
     2161 ggcttatact tgttttcatc ttgaattata tagtgacgct ccctcaacca ttcgatttgt
     2221 cttttctttt gacgatagcc tgttaaatca gcaagttcgt ctttcgttaa aaattcagta
     2281 ggttgttcca tattctctcc aaataacccc ctcatttaga gggattgagt taaataatcg
     2341 ttaagccttt gtcctatcca ccgcatacaa gggacggcca ttataacttt tgccatatgt
     2401 aacccttgtg cgttttgcgt ttaccctgaa tgcaaaggct gatttttgaa tgtgagaaac
     2461 catctttacc tgcacttgtc attgaggtgt attttttgaa taatttcccg tccagagtta
     2521 ttgcggcaac aggaactgag caactctcaa tattcatttt tttcatcctc tcggactgct
     2581 tgctaaaacc tccaagtctt gagcaatgca acatattttc tgagcgtgta caccactcta
     2641 aattttcagg tcggttattt gttttgtctc tgtccttatg atttacatgt agatctggat
     2701 aaccgtgaaa agtttcgcat accagtctat ggattaaata gtcttttact ccattctcat
     2761 ctacaagctg aactcttaaa taaccattct ttaaaggtct aggttttaag attttgttgc
     2821 tcaagaaact aaaaatttct ccattctcgg tagctgcata gttttcattg cgaggtaaga
     2881 tacgcactta atctctctcc tatccatttc attacatttg tacacatcga atttcctatc
     2941 gccttatatc gtgggctatc agggcattct tcggcagatt tgccacggta tgtgattttc
     3001 gtccagccgt ctggaaagcc ttgtagtctc tcgcattcgg tgggagtaag ttttcgaata
     3061 gttgttccag cactgacagc gtgaacatca gttcgggtaa gcatgtaact tacaccactc
     3121 tcatcaaata cgttgccgtt tccgtcgttt tgtggctgtc tgccgatagt attaccggca
     3181 agggcaatac aagggatatt atttccaccc gtccccattc ttgctttcag tgttggcgtt
     3241 ttgtcctgaa tttcgctaat tcgtacagct tcagcacctt ttacttcaaa taagacgttc
     3301 tcttgcccgt tgtttcgacc taaacaatga gctttgtttt ggctgataat tggatcttgc
     3361 gtaccgtgaa caactagcgt ctcactcccg ccactcaaag cctccccctg atgctttaac
     3421 tgtaccgcct ttgtcagatt ggcagttatg gacaacggca ttatttaaga tgtagctgtt
     3481 gtcatctgcc acctcaatgt tataaacaac ttcatttcca gttatctcaa aggattgcac
     3541 gcttctcaat aatctatttt catcaaggcg actttttctt gatgtcgatt ggaggaacgc
     3601 tcgcatttga taatagtcat tctgattgac aattcttcct tggatttctt ttgtcggagc
     3661 aacagttact ttggaaacag atgagatata tcctaaggtt tgggataatg cagcaatgcc
     3721 gtaagcaagg gatttcgaaa tgctatttgc ggtataaact ccgtttctaa aagagccatc
     3781 ggtaatcata tacccttcaa aaattttact tctgaaagaa tgagataaac accaagccgg
     3841 tatagttttt ccgccggctt tctcaccaaa ttgcgaataa agaaaatcag caagttcagt
     3901 gtcacaaata gtgattttaa ttaccgaatt attttcggta gtaatatgat gaggaagttt
     3961 ggcaaaagaa agagaaaact tccgatattt ctctttattt acagaaataa caacagcttt
     4021 tttatttttg cctttccatc ttcttatcca gccatcacca agataataac cggcaattag
     4081 aaggacttcg tcatcagtca gtttgctatg aaaaccacca tagggcataa ctgaaaaatc
     4141 agttaatgat acccattgat agccctctag cttatgagcc tcaatccact caggtttgga
     4201 aatgatagtt ttcctatggt attttccatt ccttttggtg tttatcgttt gccatttttg
     4261 agcataaaaa ggatgttcag gggtgcaaac gattgattca ggtaagccaa cagccgttaa
     4321 ttttccaact ggttttattt cactgccaac acgcaaaata ggttttagtt gtcctttatg
     4381 agtaacaact aaatctccga cagaaagtgt ttcgattggc atatatcctt tatccgttaa
     4441 aaccatatgc ccagcggtaa agcaaggcgt acccccaacc aacacatcag gagcaggaat
     4501 tttacgattg aggatttttt caggtagggc ggtcatatcg cccaagttcg gcacatcggg
     4561 gaaacggtga gcaagcactg cacacggaaa cggctcaatc tcgctgaacc ataacggcgt
     4621 accgatgtcg tgccacgcta cacttgctgc ctcaatgccg gagcagatag atccataggt
     4681 gaattttatt atgttgttca tacaatcttc tccgcctgca ccgcaacgca aatatcatca
     4741 ataaatgcgt taaaagtgcg gcgtaattct ggttcaaaaa attctgcgat cagcttggat
     4801 aagcgaacct cgccgacaat tcgttcaatc gcttgctctc gggcaaacgc ctctaattca
     4861 agcggtttta tctcttcttg tggcggtggt ggcggttgga tactttccca atgatcaggt
     4921 ctaattttcc atttatcagc acaaatttgt tgaatttgcc caccagcaca atcgattaac
     4981 tcccgagagc aatcatcggt cgttttggtt ttgtctacca ccaagaatag gacttcaatc
     5041 ggggtatcct caaaggcgtt ttggatgcgg ttgagttcta caagttgatt gccaacttct
     5101 tctcgaaagc gtttttctgt ttggcggtag ccaacgccgg gaaagagaat gaaaaatccc
     5161 cattggtgac tatttgccag tccttttagg acgaaaatat catcaaccac cccagatttt
     5221 ttccacggaa attcggattg aatttgtgct tgttcggctt ggcttaaatc cttaaattta
     5281 agggaaaatg gcggattcat aatcacgcaa tcgcacggtt cgccgttagg atagagaaag
     5341 aagctctgat tatagatttg agccgtaggg aaattgtgcc gtaacacatc gcagctttcg
     5401 gattggacct ctaccgcagt aaaagaggtt gggcggacaa attgctccaa ctgcccagaa
     5461 cctgccgccc cgtcaaaaac agaaacatta tttctggcat actgcttgac cttttcagca
     5521 acataacggc gtagagcttc acctgtgatg tattcagcga atttgtcggc ttttttgcgg
     5581 ttattgtgtt cttggaattg catttttcct ccaaaaaata accgcttgcg gaacaagcgg
     5641 ttgggttaat tagcgttgag ctgtacaaat tttgccatcg cagtcgttgc gtaactctag
     5701 atggtcagca gcaactgcaa aggcggttaa aaagagtatg atttttgcgt atttcatcgt
     5761 ctaatcctca aaatttgggt gcaggaaacc gccgcttgat gtttcgcaag cggtcgggtt
     5821 ttataatttt ttgtgattag aacgttggct ttttaaatgc cgggtcgaaa cctcgaacgt
     5881 gtttgagtac tcgccagttt gtcatcgggt cgtaatcaaa ttctttggta atccgttcaa
     5941 gaattttatg agccgattgt gcggtgtggc tatattcaaa accctgtccg tagatttcag
     6001 gtgcgatatt tgagccgagt ttttgaaaca tcgggtagat atagcggaaa gtgtgaatgc
     6061 cacgcacgaa agcgaaccaa gcccatatga ggctttggag ttcatcttcg gtaaagtcga
     6121 aagagtattt ctttggcggt ggtgcaagcg gtaggttttg ctgattattt tgcaacgcat
     6181 atttaccagt cttgcgaatt tgtggcagaa cttcttcaaa tacccacgct tcaaactttt
     6241 ccgcttctgg tttgcgtgat ttgataatca gtcggtatag gtttggttcg ttgatgaaga
     6301 tcgctttttg ttgtctctgc attttatcgg tgaggtatcg tttcgatacc ccattttctt
     6361 tacagtgttt ttgcagagta aggctttcat ttacataacc taaaattcgg caaacatctg
     6421 caccgcaaaa ccacggttct tgatttggat cgataatgac acgaacagca gatgaattga
     6481 aattgaaaac agggaattga acttgatttg acattttttg taccttttgg atttaagtat
     6541 ttaatccgat cattaagtgg gtgatcgggg ttcaacttac cctccaaaag atgggcggag
     6601 cttattcaga tgtattgtat atcgctctct cgccccgatc atttcggatt aaacctaaaa
     6661 tttaggtaca aaaaaaccgc tttatatcgg aggcggaaac cgcttttgga aagtaagtgt
     6721 ggttatctta gccgaaaggg cggttttttg tcaattagat tttattcttc aattagcaat
     6781 ggcttttctt tcagttcttc aatcgctctg gtttgtaaca gcgagctcat ttgctgaata
     6841 gccaaacggt tgagcattgc cagtcgctct tcttggctgt aaccttgctc aattagtagg
     6901 gcgttttggc tttccaatgc agcaaggacg gtaagttgct caacggtagc gtggtctcgc
     6961 atattgcctt tcaggttcgg attgcggtct ttccactgtt ttgccgtttg tccgaagaga
     7021 gcttgattga gaatgtccgc ttcgctggaa taaacgaaag tatgttgttt tgtattcagc
     7081 aatgccggta tgatgtgagc tttgatggca tcagtatgaa tgcggtagtt cgccttgctt
     7141 aaaatgcgtt ttacgctcca ttcgagctta ctttcgttcg cttcttgctg tttgagtcgt
     7201 tggaactctt tgatgagata aagcttaaat tctggactga gccaagaacc aaattcgaga
     7261 gcaatatctt tgtgggcgta agtgccgcta ccatatcgtc ctgcttttgc tactagccca
     7321 atagctcccg ttgcagtcca ttttttgaca gacatcacaa agcggtttaa gccgatgttg
     7381 tttttaattt ggtgtaattc caccaaatta aaatttggat tattcagctc ttcccaaact
     7441 tgaagaaatt caatggtatt tttattttga agccagtttt taatgagctg gtcactgtct
     7501 ccaaaagctt tgcacatatc agttaggctg atgtaatcct caccatcacg agcggttact
     7561 ttgacctcca cgccttgtac aatcattacg ctatttgcca tttcgtttct ccgtttttag
     7621 gtacaaaaaa agccgttggt ggacggcttg aaagtgcggt tatcttaatc cgaattgggg
     7681 gcggtgtcaa ttagattaat ccgtataagt atggaaccaa gttaaagagt agaactacaa
     7741 cacataacca aaaaatgaaa ttcatatctt gctcagtttt gattttgtgt aaaatacgct
     7801 taagtttgtt tttcatttag gaaaccttta atgtttagtt tattgcgtga tgctttaacc
     7861 tttgctgcaa tgtttacagg gattttattt cctgcaatta ttcataaata cgatctatca
     7921 cttggtacac aaatccaatt acttagcttt gttccagctt tctttgtgtt gtgccatttt
     7981 cttattaagc gaaaatatca acgtgatttt gacagacttt cgtatttatc tgctgtggtt
     8041 tgcgtagcaa tgtgtgcagg cgttggagca tttagccaat cagaaatgat tgagctaggt
     8101 tttaaagttg agcgtgttct tgattatgtg actatcaaat tcttactcta cttttggagc
     8161 ttgctgttat tgccagttgt gctaagaaaa ttgtttggga aagattagtt ggttatttaa
     8221 agagagctat ttgtcaaacc tcaatatcta tttttgcgat ctgcatcgaa aaaataaatt
     8281 ttcgttctga cagtaaaacg ctttcgtagt aatctcataa aaaacataag g
//
LOCUS       DANLXO010000109         8305 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.109, whole genome shotgun sequence.
ACCESSION   DANLXO010000109 DANLXO010000000
VERSION     DANLXO010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8305
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.109"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..547)
                     /locus_tag="PXD69_002239"
     CDS             complement(<1..547)
                     /locus_tag="PXD69_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein Hlp"
                     /protein_id="HDL6284391.1"
                     /translation="MNTLAKISLSVLFTLFLTACEQPNSTKTQSSAESPVQVKEESKE
                     EVKPADTGAQDYKMLREWQDTQEKALNDAIKAATETLTDKQKADSTLMQETVNNALLA
                     QIDHIKISAETLNIQNNEVKALKDKTLEVLTLGAQMIVEGAKMEKNPTPEAHKAFGEL
                     QTKLNQLAEEGQQLENILRAKY"
     gene            complement(614..1198)
                     /locus_tag="PXD69_002240"
     CDS             complement(614..1198)
                     /locus_tag="PXD69_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein HlpB"
                     /protein_id="HDL6284392.1"
                     /translation="MNKLTKISATALVALFLAACDKPAEKAPATEPTKTTEAAPTTTA
                     PAAEAAKPAETAVAAPSEAAKADYQKLVDWNTAQESTMATAQAELQKKLATQDPKQIQ
                     EGLSAFNKKVEETVKSLDAIEVSDAQIKTFKEKTKSVLTLSSEVISEQVKTISTPNDQ
                     AALQAVQQKAQSLIEAGNELQKLNVELQQRFSAK"
     gene            complement(1330..2514)
                     /locus_tag="PXD69_002241"
     CDS             complement(1330..2514)
                     /locus_tag="PXD69_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL6284393.1"
                     /translation="MKSADIVIVGGGMVGLALAGLLKDVDCQIKIIEKNTPKFDADTI
                     YHRVSAINASSQKILEQIGAFQHIPAQRLSPYTEMKVWEKDSFANIHFDNNDNEIKQL
                     GLSQLGFILENAVIQHALWQQVSQQANVEYIIAAPQTLGVSENGAFLTLDNGEMLSAK
                     LVVGADGANSWVRNQMKMPLTSKDYQHTALVCNVKTTEKHGKTARQIFAEDSIFAFLP
                     MADEHLCSIVWSLPPNKANELKNASEAEFNKALTIAFDNQLGLCEVQSLREIYPLAAR
                     FCRDFAQPRIALIGDAAHTIHPLAGLGVNLGFADARTLANEIQKQLVNNQDIGEYRHL
                     RQFERERKAQAMKLLATMEGLKQLFDGNHPLKKLFRGIGLSLTNQLPFVKKQLIQQAI
                     YL"
     gene            complement(2597..3460)
                     /gene="rapZ"
                     /locus_tag="PXD69_002242"
     CDS             complement(2597..3460)
                     /gene="rapZ"
                     /locus_tag="PXD69_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDL6284394.1"
                     /translation="MELIIISGRSGSGKSVALRALEDAGYYCVDNIPLPLIPTLTYYL
                     TQENRSAVISLDIRNLPNTPNAIEELLTQLEPLNAKLIFLDCERNTLIRRYSDSRRIH
                     PLSTQDDLSLEGALDLEQKLLEPLVQNANYIIDTSHLSSHELAENLRQILQGSTEKEL
                     KIIFQSFGFKYGLPADSDYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNF
                     IYQTRNYLEMWLPMLEQNNRSYLTIAIGCTGGKHRSIFIAEQLAKYFQAKGKNVQVRH
                     KSLEKHHKKTS"
     gene            complement(3473..3985)
                     /locus_tag="PXD69_002243"
     CDS             complement(3473..3985)
                     /locus_tag="PXD69_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL6284395.1"
                     /translation="MTKLTEFLSPENVRQGVLISSKKRALELVGKIVAESINQTEQQS
                     EALCPIECFGNLFKREKLGTTGLNQGIALPHAKLPACGDIELTKPIAVFLQLEEAIDY
                     EAQDNKEVDLIYAMMFPENSCEQYKSCLPAIAQKLTDKSLLKQLRAAESAEDIWQILV
                     YADNHLKDEE"
     gene            complement(4027..4752)
                     /gene="lptB"
                     /locus_tag="PXD69_002244"
     CDS             complement(4027..4752)
                     /gene="lptB"
                     /locus_tag="PXD69_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005727816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDL6284396.1"
                     /translation="MSVLYAEHLAKSYKQRQVVKDVSLNVKSGEIVGLLGPNGAGKTT
                     TFYMVVGLVRHDHGTIRIDDQDISTLPMHDRAKQGIGYLPQEASIFRRLSVYDNLMSV
                     LQVRKNINDKQRKERAEELITEFHIEHIRNSLGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKKIIVNLKERGLGVLITDHNVRETLDVCERAYIVGSGEMIAS
                     GTPQQVLENPDVKRVYLGDQFKL"
     gene            complement(4764..5270)
                     /gene="lptA"
                     /locus_tag="PXD69_002245"
     CDS             complement(4764..5270)
                     /gene="lptA"
                     /locus_tag="PXD69_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HDL6284397.1"
                     /translation="MKLMFKSILVSVLLGSSFSAYALKGDTDQPINIDSGSQSLDMTN
                     NIVTFSDNVVITQGSIKVTAANVKITRQEGKKETIDATGSPVTFQQTLDNGKPVNGKG
                     NSVHYDLNSEFLTLIGNAELKQQGSFIKANKITYDVKKQQLKATSGGKTRVKTVLIPN
                     ELQDNKKK"
     gene            complement(5294..5878)
                     /gene="lptC"
                     /locus_tag="PXD69_002246"
     CDS             complement(5294..5878)
                     /gene="lptC"
                     /locus_tag="PXD69_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDL6284398.1"
                     /translation="MNKRLTVILLIIVAVLGGWYYSLQEKENTGLDQLIKKEGQPEYV
                     GNKMSTTVYDLKGNPQYFAQATEIKRYESTERTEFFKPFIELFAKESTQKQWKVSADY
                     AEITKEKMLNLKGNIKLVALDPASRLQQITTDTLTVDLNTQDIFTESTVKSIGSGFTT
                     TGVGLKGNLKQQVATLQKDVKSYIEPTIIQETKE"
     gene            complement(6032..6835)
                     /gene="xthA"
                     /locus_tag="PXD69_002247"
     CDS             complement(6032..6835)
                     /gene="xthA"
                     /locus_tag="PXD69_002247"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDL6284399.1"
                     /translation="MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPY
                     DLVNHLGYHVFHHGQKGHYGVALLTKKEPIAVRKGFPTDVLDAQKRMIMADIETDFGV
                     LTVLNGYFPQGENRSHETKFPAKQKFYADLQNYLESELKPENPIIIMGDMNISPTDLD
                     IGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLVDTFRAGNPDVNDKFSWFDYRSK
                     GFDDNRGLRIDLILASKSLAERCVETGIDLDIRAMEKPSDHSPVWATFK"
     gene            complement(6933..>8305)
                     /locus_tag="PXD69_002248"
     CDS             complement(6933..>8305)
                     /locus_tag="PXD69_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDL6284400.1"
                     /translation="SNEVFISIIVLLILSLLRINVVIALIISALTCGLIGNLGVEGAG
                     FTEALEKTIKSFTGGLGGGAETAMNYAVLGAFAVALSKSGVTDLLAYKVIKSFGHSPS
                     GRSVTWFKYIVLFVLVAFAMSSQNLIPIHIAFIPILIPPLLSVMNKLQIDRRAVACAL
                     TFGLTATYMLIPAGFGQIFIESILVKNINQAGEPFQLVTTTAEMTKAMLIPVSGMILG
                     LLFAFFVSYRKPRVYIENMPEPTADDIEARVANVKPFHIGISIVAIIATCSVQLATNS
                     TIIGGLVGLVIFALGGVFRLKESNDVFQAGLRLMAMIGFVMIAASGFAGVVNSTGGVP
                     ALVESLRDVISSKEMAALLMLVVGLFITMGIGSSFSTVPIITSIYVPLCISFGFSPLA
                     TMAIVGVAAALGDAGSPASDSTLGPTSGLNADGKHDHIWDSVVPTFIHFNIPLLVFGW
                     IAAMTL"
BASE COUNT         2308 a         1661 c         1675 g         2661 t
ORIGIN      
        1 catatttagc tcttaatata ttttctaact gttgcccttc ttcagctaat tgattcaatt
       61 ttgtttgtaa ctcgccaaat gctttatgtg cttccggtgt aggatttttc tccattttag
      121 caccttctac gatcatctga gcccctaaag tcaggacttc taaggttttg tcttttagtg
      181 ctttgacttc attattttga atattcaggg tttcagcact tatcttaata tgatcaattt
      241 gagctaataa tgcgttatta actgtctctt gcattaaggt agaatcggct ttttgtttgt
      301 cagtaagtgt ttctgttgcc gctttaattg catcatttaa ggctttttct tgagtgtctt
      361 gccattcccg taacatttta taatcttgag cgccggtatc agcaggttta acttcttctt
      421 ttgactcttc tttcacttga actggcgatt ctgctgagct ctgtgttttg gtagaattag
      481 gttgttcgca agcggttaaa aaaagggtaa ataatacaga taggctaatt ttagcgagcg
      541 tgttcatagt aatccttagt aattgcaaaa aaaagctaga gcaaaatact ctagcttttc
      601 attgaatggt aaattattta gctgagaatc tttgctgtaa ttctacgttt aatttttgta
      661 actcattacc agcttcaatt aaagactgag ctttttgttg tacggcttgt aatgctgctt
      721 ggtcatttgg tgtagagatc gtttttactt gttcagaaat cacttcactt gaaagtgtta
      781 aaactgattt tgttttttct ttaaatgttt tgatttgtgc atcagatact tcaatcgcat
      841 ctaagctttt tacagtttct tctacttttt tattaaatgc acttaatcct tcttgaattt
      901 gtttaggatc ttgtgtagct aatttctttt gtagttctgc ttgtgctgtt gccattgtgc
      961 tttcttgtgc cgtattccaa tcaactaatt tttggtaatc tgcttttgca gcttcgcttg
     1021 gagcggctac agctgtttca gcaggtttgg ctgcttctgc agcaggagct gttgtagttg
     1081 gtgcagcttc agttgttttt gtaggttctg ttgccggtgc tttttctgct ggtttatcac
     1141 aagctgctaa gaataatgcg actaaagcgg ttgcactgat ttttgttaat ttgttcatta
     1201 aaaaattcct caagaatata aaaataaaag ccaataaagg ctggttattg taccaataaa
     1261 tagacaagta atctccgtat tagttcataa aatcgttcat ctttacgtta tttcgaaaaa
     1321 atttacattt tataagtaaa tagcttgctg aataagctgc tttttcacaa aaggcagctg
     1381 gttggttagg cttaaaccaa ttcctctgaa taatttttta agcgggtgat tgccgtcaaa
     1441 tagctgtttt aatccttcca ttgtggctaa taatttcatc gcttgggctt tacgctcacg
     1501 ttcaaattgg cgtaaatggc ggtattcacc aatatcttgg ttgtttacca actgtttttg
     1561 gatttcgttt gccagcgttc tggcatcggc aaagcctaaa ttgacaccaa gtcccgccaa
     1621 tgggtgaatg gtatgagcgg catcaccaat caacgcaata cgaggttggg caaagtcacg
     1681 gcagaagcgt gctgcaagcg ggtaaatttc acgcaaactt tgcacttcac ataagccaag
     1741 ctgattatcg aaggcaatcg ttaaggcttt attaaattcg gcttcgcttg cattttttaa
     1801 ttcattggct ttgtttggtg gcagcgacca aacaatcgag cagagatgct catctgccat
     1861 tggcagaaaa gcaaaaatgc tatcttcagc aaagatttga cgagcggttt tgccgtgctt
     1921 ttcggttgtt ttgacattac agactaaggc ggtatgttga taatctttac tggtaagcgg
     1981 cattttcatc tggttacgca cccacgaatt tgcaccgtct gccccgacaa ccaatttagc
     2041 agacagcatt tcgccgttat ctaaggttaa aaatgccccg ttttcgctca cgcccagagt
     2101 ttggggggcg gcgataatat attctacatt agcttgttga gaaacctgtt gccacaatgc
     2161 gtgttgaatc accgcatttt ccaaaataaa gccaagttgt gaaagtccta attgcttgat
     2221 ttcattatca ttattatcaa aatggatatt agcaaagctg tctttttccc acactttcat
     2281 ttcggtgtaa ggagaaaggc gttgagccgg aatgtgttga aaagcaccaa tctgttccag
     2341 tattttttgg cttgaagcat taatcgcact tacacggtgg taaatcgtat cggcatcaaa
     2401 tttgggcgtg tttttctcaa taattttaat ttggcaatcg acatctttga gcagtccggc
     2461 aagagccagc ccaaccatac cgccgccaac aataacaata tctgcggatt tcataaaatc
     2521 aaatgtaggg gcggtgccct gtgcccgccc taaaatagtt gaaatgaggg ctggcacagg
     2581 accagcccct acttatttaa gatgtttttt tatggtgttt ttccaaactt ttatgccgaa
     2641 cttgcacatt tttgcctttt gcttggaaat attttgccag ttgctcggca ataaatatgg
     2701 aacgatgttt tccaccagtg caaccaatcg caatagttag gtagctacgg ttattttgtt
     2761 ccaacatcgg cagccacatt tctaaataat tgcgggtttg gtaaataaaa ttatgcactt
     2821 cggtttggcg ttctaagaaa tcaatcaccg gttgctctaa gcctgtcatt gggcgaagct
     2881 ccggattcca atgtgggttc ggtaaaaagc gaacatcaaa aacgtaatcg gaatcggcag
     2941 gtaagccgta tttaaaaccg aatgattgga aaataatttt aagctctttt tcggttgagc
     3001 cttgcagtat ttggcgaaga ttttccgcta attcgtgcga agaaagatga ctggtgtcaa
     3061 taatataatt tgcattttgc accaaaggct caagcaattt ttgttccaaa tccaatgcac
     3121 cttctaacga gagatcgtct tgggtggaaa gcgggtggat tcggcgggaa tcgctataac
     3181 ggcggattaa ggtattgcgt tcgcaatcta aaaaaatcag cttagcattt aaaggctcaa
     3241 gctgggtaag caattcttca atcgcattag gcgtattcgg taaattacga atatctaagc
     3301 tgatgactgc cgaacgattt tcttgagtaa ggtagtaggt taaggttgga attaaaggta
     3361 aagggatatt atccacgcag taataacctg catcttctaa tgctcttaat gctaccgatt
     3421 taccagagcc tgagcgtccg cttataatga ttaattccat atttcctcag tattattctt
     3481 catcttttag gtgattatca gcatacacca aaatttgcca aatatcttct gcggattcag
     3541 ctgctcggag ctgttttaat aacgatttat cggtaagttt ctgtgcaatt gcaggtaggc
     3601 aacttttata ctgttcgcag ctattttccg gaaacatcat tgcataaatt aaatccactt
     3661 ctttgttgtc ttgggcttcg tagtcaatcg cttcttccag ttgtaaaaag accgcaatcg
     3721 gtttagtcag ctcaatatca ccgcaagcgg gcaattttgc atgaggaagt gcaatgcctt
     3781 gatttaagcc ggttgtgcct aacttttcac gtttaaataa attgccaaag cattcaatag
     3841 ggcagagtgc ttcagattgc tgttcggttt ggttgattga ttcagccacg attttaccca
     3901 cgagttctaa cgctcgtttt ttacttgaaa tcagtacacc ttggcgaaca ttttcagggc
     3961 ttagaaattc ggttagtttt gtcataattt ttcatctaaa gatgaaatcc ccaaagaggg
     4021 gattttttag agtttgaatt gatcgcctaa ataaacacgt tttacatcag ggttttcaag
     4081 cacttgctgt ggtgtgccgc tggcaatcat ttcgccgcta ccgacaatgt aggctctttc
     4141 acatacatct agagtttcac gtacgttatg gtcggtaatc aataccccta aaccacgctc
     4201 ttttaaattg acgataattt ttttaatatc aattaccgag attgggtcaa ccccagcaaa
     4261 aggttcatct aacagaataa atttcgggtt cgctgctaat gctcgggcaa tttccacacg
     4321 gcggcgttca ccacctgaaa gtgattgacc taaactattg cgaatatgct caatatggaa
     4381 ttctgtaatc agctcttcgg cacgctcttt acgctgttta tcattgatat ttttacgcac
     4441 ttgtaatacc gacattaagt tatcgtacac acttaaacgg cggaaaatag atgcttcttg
     4501 cggtagatag ccaatccctt gttttgctct gtcgtgcatt ggtagtgtgc tgatatcttg
     4561 gtcgtcaata cgaattgtgc cgtggtcgtg gcgaaccaaa cccacaacca tatagaaagt
     4621 ggtggtttta cctgcgccgt tcggaccgag caagcccacg atttcacctg atttgacatt
     4681 caggctgacg tcttttacca cttggcgttg tttatagctt tttgctaaat gttcggcata
     4741 aagcacagac atatcattta accttatttt ttcttgttat cttgaagttc atttggaatt
     4801 agcacggttt tcactcgggt tttaccgcca ctggtagctt taagttgttg ttttttcaca
     4861 tcataggtaa ttttattggc tttaataaag ctaccttgtt gtttgagttc cgcattgcca
     4921 atcagcgtta aaaattcaga gtttaaatca taatgaacgc tgttgccttt accgtttacc
     4981 ggtttaccgt tatctaaggt ttgttggaat gttacaggtg agcctgtagc gtcaatagtt
     5041 tcttttttac cttcttgacg ggtaattttg acgtttgctg cggtcacttt aatcgaccct
     5101 tgagtgataa cgacattatc gctaaaggtc acgatattgt tagtcatatc taacgattgg
     5161 ctacctgaat caatattaat cggctgatcg gtatcgcctt ttagagcata agcggaaaag
     5221 ctgctaccca gtaacacgct cactaaaata gatttaaaca ttaatttcat tgttattcct
     5281 tgttccaagc aaattattct ttagtttctt gaataatggt cggttcaatg taagatttta
     5341 catctttttg caaagtcgca acttgttgtt ttaagttacc ttttaatcca acccccgttg
     5401 tagtaaaacc ggaacctatc gatttgaccg tactttcggt aaaaatatcc tgtgtattta
     5461 aatcaacagt taacgtatcg gtagtgattt gttgcaaacg tgatgcagga tctaatgcaa
     5521 caagtttgat attacctttt aaatttaaca ttttttcttt ggtaatttct gcataatcgg
     5581 cactgacttt ccactgtttt tgcgtcgact ctttggcaaa aagctcaata aaaggtttaa
     5641 aaaactcagt acgctcagta gactcatagc gtttaatttc agtagcttga gcgaaatatt
     5701 gtgggtttcc ttttagatca tagaccgtgg tggacatttt attccccaca tattcaggct
     5761 gtccttcctt tttaataagc tgatcaagcc ccgtattctc tttctcttgt aagctgtaat
     5821 accagccacc aagtacggca acaataatca gtaaaataac ggttaaacgt ttgttcataa
     5881 tccaaaaata atctaaaaat agtgtttgat tgtagcacag atttgaatag ggatatagta
     5941 cagcgtaaaa agtgcaaaaa agtgagaaaa aataaccgct tgtagggcta aaaactgaca
     6001 agcggttgaa aactcagatt tttttgcaac tttatttaaa ggttgcccaa acaggggagt
     6061 ggtcagacgg tttttccatt gctcgaatgt ctaaatcaat gcctgtttcc acgcaacgct
     6121 cagcaagtga ttttgaagca agaattaaat caatacgcaa gccacgatta tcatcaaaac
     6181 cttttgaacg gtagtcaaac caagagaact tatcgttcac gtctgggttg cctgcacgga
     6241 aagtatcaac caagccgtag ctgtataagc gatctagcca ttcacgctct tcgggtaaga
     6301 atgaacattt accgtcacgc agccagcgtt tgcggtttgg ctcgccgatg ccgatatcca
     6361 aatcagtcgg gctgatgttc atatcgccca taataataat cggattttcc ggctttaatt
     6421 cgctttccaa gtagttctgc aaatcagcat agaatttttg ttttgccggg aatttggttt
     6481 cgtggctgcg attttccccc tgtgggaaat agccgtttaa tacggttagc acgccgaaat
     6541 cggtctcgat atccgccata atcattcgtt tttgagcatc aagtacatct gtcgggaagc
     6601 ctttacgcac cgctataggc tcttttttag tcagtaatgc cacgccgtaa tgacctttct
     6661 gcccgtggtg gaaaacgtgg tagcctaagt gattgactaa atcgtaagga aaatcttcat
     6721 cggcaacttt gatttcttgt aagccgagta catcgggctg gtgtttttcg ataatcgctt
     6781 cgagctgatg tggtctggct cgtaatccgt tgatattaaa agagataaat ttcattggtg
     6841 atcctaatgt ggtttgcaaa ataaagaaga aaatagaccg cttgtaatgg ctacaagcgg
     6901 tcatttttag caaaaatttt gcatattata gcttaaagtg tcattgctgc aatccagccg
     6961 aacactaata atggaatgtt aaagtggata aaagttggta caacagaatc ccaaatgtgg
     7021 tcgtgtttac cgtcagcatt caagccggag gttggaccaa gtgtggaatc tgatgccgga
     7081 gaacctgcat caccgagtgc agcagcaaca ccgacaatcg ccattgtcgc cagtggcgag
     7141 aagccaaatg agatacaaag cggcacataa attgaggtaa tgatcggcac agtcgagaat
     7201 gaagagccga tacccatcgt aataaataag ccaacgacta acattagcaa tgctgccatt
     7261 tcttttgatg aaatcacatc acgcaggctt tctaccaatg ccggcacacc gcctgttgaa
     7321 ttgaccacgc cggcaaaacc ggaggcggca atcatcacaa agccaatcat cgccattaaa
     7381 cgtaagccag cttggaagac atcgttactc tctttcagtc taaatacacc gcctaaggcg
     7441 aaaataacca gaccgactaa gccgccgata atagtcgaat ttgttgctaa ttgcaccgaa
     7501 caggtcgcga taatcgccac aatactaatg ccgatatgga agggcttaac gtttgcaaca
     7561 cgggcttcaa tatcatctgc ggttggttca ggcatatttt caatatacac acgcggttta
     7621 cggtatgaca caaagaatgc aaacagtaag cctaaaatca taccggaaac aggaattaac
     7681 atcgctttgg tcatttccgc tgtggtagtc actaattgga acggttcacc tgcttggttg
     7741 atatttttaa ctaagatgct ttcaataaag atctgaccga aacctgccgg aattaacata
     7801 taagtggcgg ttaaaccaaa ggttaaagca caagctaccg cacggcggtc aatttgcaat
     7861 ttattcatta cgcttaatag cggtggaatt aaaatcggaa taaaggcaat atgaattgga
     7921 attaggtttt gagatgacat tgcaaatgcc actaacacaa ataatacaat gtatttaaac
     7981 caagtaacgg agcgacctga cgggctgtga ccaaaggatt tgatcacttt ataggctaat
     8041 aaatcggtca cgcctgattt tgatagagct acggcaaacg caccaagaac ggcatagttc
     8101 atagcagttt ccgcaccccc acctaaacca ccagtaaaac tttttattgt tttttccaat
     8161 gcttcggtaa atccagcccc ttctacacca agattaccga ttagaccgca agtaagggca
     8221 gaaataataa gtgcgattac tacattaatt ctaagcaagc ttaggattaa cagcacgata
     8281 atcgaaataa agacttcgtt tgata
//
LOCUS       DANLXO010000110         8277 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.110, whole genome shotgun sequence.
ACCESSION   DANLXO010000110 DANLXO010000000
VERSION     DANLXO010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8277
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.110"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            177..554
                     /locus_tag="PXD69_002249"
     CDS             177..554
                     /locus_tag="PXD69_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HDL6284401.1"
                     /translation="MEYQFTHSIHGVVAKCSMDHEAFARWLNAEITENPSQLAPIFAE
                     IEKCRAAFPNHYECVFEGREYSLYFDYDEVMAKANNLDAAFDDEEMEEGFQFYNEESI
                     AFCGLDDFEKFLKAYQHFVQTYH"
     gene            643..1230
                     /gene="yihI"
                     /locus_tag="PXD69_002250"
     CDS             643..1230
                     /gene="yihI"
                     /locus_tag="PXD69_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HDL6284402.1"
                     /translation="MSRTKKTRRITDIMPARKTDKPKQPMPKLGGGKNRKLTRYELDA
                     QAREEKRKRKHKGLPTGSRNADPAEQKKAVVKEVKDPRIGSRKKVPLMVEFVNQPEKG
                     RTIKAVPVEPIKPTLSPEQELEQLENNECLNQLLDDLEAGKTLSAEDQKFMNECLDRI
                     DELMTELGIEYEDEEGDNGDALLRQFETMDINKFR"
     gene            1244..1711
                     /locus_tag="PXD69_002251"
     CDS             1244..1711
                     /locus_tag="PXD69_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2489 domain-containing protein"
                     /protein_id="HDL6284403.1"
                     /translation="MLRIFLMVLAALILISLGGYALHLMLKVRAQKKHEQALIEQAKQ
                     AQKDRYIRILDSIEVIARAMISEQCDFSEGVLRLKPLLDVLGRKLSDYTAMWALYGVV
                     ENMPILDERKNLKRNERMKLDLEREAKEAELESDIKNECYQLLKDIEEMRKAI"
     gene            1711..3078
                     /gene="hemN"
                     /locus_tag="PXD69_002252"
     CDS             1711..3078
                     /gene="hemN"
                     /locus_tag="PXD69_002252"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDL6284404.1"
                     /translation="MSEIIWDLALIQKYNHSGPRYTSYPTALEFNENYTNEDFIRAAA
                     RYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRL
                     VTQIHWGGGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDHLRAI
                     GFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVE
                     SFMYTLKRVVELNPDRMSVFNYAHLPSRFAAQVKIKEELLPAPETKLTILQNSIEFLG
                     KNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTY
                     AQNRKELQQYYADVETNGIALHKGIALTQDDCIRRDVIKALICNFKLDFATIEKQYGI
                     DFKRYFAEDLAFLAPLAEDELLTMNDDSIVVSPRGRLLIRNICLCFDVYSRQLARRQQ
                     FSRII"
     gene            3152..5485
                     /gene="lptD"
                     /locus_tag="PXD69_002253"
     CDS             3152..5485
                     /gene="lptD"
                     /locus_tag="PXD69_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HDL6284405.1"
                     /translation="MKQRYSLLSLAVMAACYSNSAAADLKQQCLLGVPHFQGEVVEGD
                     QLRMPVTIEADSAVINQPRDATYTGDVTIKQGNRSIWADQVRVEQDGENARMAYLQGN
                     FNYQDNLIQATGSDATINLLSKDANLANANYQLIGRQGRGTAESGEFGNSKHTLKNAS
                     FTSCLPNDNSWQIEANEMIQHVDEEYAEMWHARFKVLGMPVFYSPYLQFPIGDRRRSG
                     LLIPSFERSSKNGWTYSQPFYWNIAPNMDSTITPTYYSRRGWQISPEFRYLTKIGQGL
                     VATEYMAKDRLSEYQPGNDDRKRYLFHWRHAMSFLTDWRFSVDYTKVSDRRYFSDFDS
                     DYGSSTDGYATQNFKLGYYQPNYNISISGKKFQTFDELDIGPYRVLPQIDFNYYKNDL
                     IKGGDFKFFAQAARFENDSKLMPKAWRFHAEPTLNFPLANRYGSLNLETKLYATYYQQ
                     TKGSESTEEIKKSVSRVLPQIKLDFKTVLESDKQLFSGYTQTLEPRVQYIYRPYKDQS
                     DIGSKAHRSVSLGYDSALLQNDYFSLFNDRRYSGLDRISSANLVTAGGTTRFFKEATG
                     EEVFNFSLGQTYYISPSKIDDTSDNSTKGHTTSWAAESNWKFHKNWNWHGSYQYDTRL
                     NQTALANMSLQYKPQSDKLIQLNYRYASKDYINQNLNTNKYGQSIKQVGGVLGWELTD
                     KVSVMTSYYHDLALKKPVEGQISLNYNTCCWAANVYVARRLVSTPVGSSDTINDFYYD
                     NKFGINFELRFGTNYSNGVTRMLKRGIIPYTEPYSIN"
     gene            complement(5627..8266)
                     /gene="ppc"
                     /locus_tag="PXD69_002254"
     CDS             complement(5627..8266)
                     /gene="ppc"
                     /locus_tag="PXD69_002254"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HDL6284406.1"
                     /translation="MNQQYSTIQHNIHMLGEFLGETIRDAQGNYILELIESIRVLSRN
                     SRAGDENAREQLLDKLANISNDDVLPVARAFSHFLNLTNIAEQHQTVSRHHIDESLGS
                     RSLDSLFLRLKSQNIPVEKVIKTVESLMIDLVLTAHPTEVTRRSLGHKHVEINKCLNL
                     LEHDDLTEAESYKIKRRLMQLIALAWHTNEIRTQRPTPVDEAKGGMAVIENSLWKAVP
                     EFCRQLNFYLEKHFGVQYPVNLAPVRFSSWMGGDRDGNPFVTAETTRRVLRMNRWKAT
                     ELFLQDIKNLAEELSITQCTPAFRAKYGNHLEPYRVLLKVLRQKLINTEIYYAELLEG
                     KISTIDESDILTSDQQLWEPLFDCYESLQACGMRIIANGALLDCLRRINCFGLGLSRL
                     DIRQESTRHEMAIAEITRYIGLGDYAHWTEDDKQAFLVRELSSRRPLIPTNWTPSPET
                     KEVLDTCKIVAEQPEGVISAYVISMAREASDVLSVHLLLKEAGCKFTIPVAPLFETLG
                     DLDHSEKVMTDLFNIGWYRGVINNYQMIMIGYSDSAKDAGMFAAGWAQYRAQEALVNL
                     CEKYNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPA
                     VAVESLELYASAILEANIFPPPEPKQQWRDVLAKASDISCQIYRDMVRGELDFVPYFR
                     SATPEQELSRLPLGSRPAKRNPKGGVESLRAIPWIFAWMQNRLMLPAWLGAGQALQQL
                     IDEGNETLLKEMCNEWPFFSTRIGMLEMVFSKADIWLAEYYDQRLVEPKLHRLGNMLR
                     TQLQADLKTVLALAHDGQLMADLPWIAESIALRNIYTDPLNLLQVELLDRIRKQGENA
                     DPVLEQALMITITGIAAGMRNTG"
BASE COUNT         2508 a         1604 c         1818 g         2347 t
ORIGIN      
        1 gtagttcctt tttgatgtat caatactaaa aataacctgt attattctag cagatttctg
       61 ggtaatcgag gagttgataa catttaaaaa ttagcgtttt gcaaaatttt ccaaaaaaag
      121 accgcttgtt aggctataat agccaaccaa acagaccaat tcaaaggaga atcggtatgg
      181 aatatcaatt tacccatagt attcacgggg tggtggcaaa atgttcgatg gatcacgagg
      241 cgtttgctcg ttggttgaat gccgaaataa cggaaaatcc tagccagtta gcccctattt
      301 tcgctgaaat agagaagtgt cgagccgcat ttccgaatca ttatgaatgt gtgtttgaag
      361 ggcgggagta tagtctctat tttgattatg atgaagtgat ggcaaaagca aacaatttag
      421 atgctgcttt tgatgatgag gaaatggaag aaggctttca attttacaat gaagagagca
      481 tcgcattttg tggcttagat gactttgaga aatttttgaa agcctaccaa cattttgtgc
      541 aaacttatca ttgattgaaa tgattaattg aaaccaaagc tattaaggga atctaattcc
      601 ttgtagaata gccgtttata gcaattttaa gatattaaat ttatgagtcg tactaaaaaa
      661 acacgtcgta ttaccgacat tatgccggca agaaagaccg ataaacctaa acagcccatg
      721 cctaaattag gtggggggaa aaatcgcaaa ctgacccgtt atgagttaga tgctcaagcc
      781 cgtgaggaaa aacgtaagcg taaacataaa ggcttgccga caggctcacg caatgctgat
      841 ccggcagagc agaaaaaagc agtggtgaaa gaggtgaaag atccgcgtat cggtagccgt
      901 aaaaaagtgc cgttaatggt ggaatttgtg aaccagccgg aaaaagggcg gacgattaag
      961 gctgtgccgg ttgagccaat caaaccaacg ctttcaccgg aacaagagct ggagcagtta
     1021 gaaaataacg aatgtttaaa tcagttgtta gatgatttgg aggcgggcaa aaccttatcc
     1081 gcagaagatc agaaatttat gaatgaatgt ttagatcgca ttgatgaatt aatgactgag
     1141 cttggcatcg aatatgaaga tgaagagggc gataatggcg atgcgttatt acgccaattt
     1201 gaaacgatgg atattaataa attccgctag gtagccgatt atgatgctaa gaatattcct
     1261 gatggtgctt gccgctttga ttttaatttc gctgggcggg tatgcactgc acttaatgct
     1321 gaaagtgcga gctcagaaaa agcacgaaca agcactgatt gaacaggcaa agcaagcaca
     1381 aaaagatcgt tatattcgga ttttagacag cattgaagtt attgctcggg caatgatttc
     1441 agaacagtgc gatttttcgg aaggcgtttt acgtttaaaa ccgctattag atgttctcgg
     1501 cagaaaatta agcgactata cggcgatgtg ggcgttgtat ggcgtggtag aaaatatgcc
     1561 gattttagat gaacgcaaaa atttaaaacg taacgaaaga atgaagttgg atttagagcg
     1621 ggaagcaaaa gaagcggagc ttgaatcaga catcaaaaat gagtgttacc aattattaaa
     1681 agatattgaa gaaatgagaa aggcaatcta atgtcagaaa ttatttggga tttagccctt
     1741 attcaaaaat ataaccattc agggcctcgt tatacctctt acccaacagc gttggagttt
     1801 aacgaaaatt acaccaatga agattttatt cgtgctgcag ctcgttaccc tgagcgtccg
     1861 ctttcgcttt atgtgcatat tccgttttgc cataaactgt gctatttctg tggctgtaat
     1921 aaagtgatta ctcgtcatcg ccataaagtt gaaatttatt tagattattt agagcgtgaa
     1981 attaaaactc gcgcacctct gtttcaaaat cgtttagtga cccaaataca ctggggtggc
     2041 ggtacgccga cttatttaga cgaagatcaa tcggcacgtt taatgcaaat gctacgagcc
     2101 aattttgatg tgagcgatga tgcggaaatc agcattgaaa tggatccgcg tgaaatcgaa
     2161 ttaagtatgt tggatcacct gcgtgctatc ggttttaacc gtctgagtat gggtattcag
     2221 gatttcgata aagaagtgca acgtttggtg aatcgtgagc aagatgaaga gtttattttt
     2281 gccttgatga aacgggcaaa agaacttggt tttgtttcaa ctaatgtgga tttgatttac
     2341 ggcttgccaa aacagaatgt ggaaagcttt atgtacacct taaaacgtgt ggtagagcta
     2401 aaccctgatc gtatgagcgt atttaactat gcccacttgc caagccgttt tgctgcacaa
     2461 gtgaaaatta aagaagagtt gttgccggct ccggaaacca aattgacgat tttgcaaaat
     2521 tccatcgaat ttttaggcaa aaacggttat aagtttatcg gtatggatca ctttgctaaa
     2581 cctgatgatg agttagctat tgcacaagaa aaaggcattt tacaccgtaa cttccaaggc
     2641 tataccactc aagaagagtg tgatttattg ggaatgggcg tatcggcaat cagcttactc
     2701 ggcgatactt acgcccaaaa ccgcaaagaa ttacaacaat actatgctga tgttgaaacc
     2761 aacggtattg cgttgcataa aggcattgcg ttaacccaag atgattgcat tcgccgtgat
     2821 gtgataaaag ccttgatttg taatttcaaa ttagattttg ccaccattga aaagcaatat
     2881 ggtattgatt ttaaacgtta ttttgccgaa gatttagctt tcttagcgcc gttggcggaa
     2941 gatgaattat taacgatgaa tgacgacagc attgtggttt ccccacgagg gcgtttattg
     3001 atccgtaata tttgcttatg ctttgatgtc tattcaagac aattagcgag aagacagcag
     3061 ttttcccgta ttatttaatg agcaagcggt cgattttggt aaaaattttg caaaaacaga
     3121 ccgcttgttc ccggcttata aaggaaaaat gatgaaacag cgttatagct tactttctct
     3181 tgctgtgatg gcagcttgtt atagcaacag tgccgcagct gatttaaagc aacaatgttt
     3241 acttggcgtg ccgcattttc agggcgaagt ggtagagggc gatcaactta gaatgcctgt
     3301 taccattgag gctgacagtg cggtcattaa ccagcctcgt gatgccacct acaccggtga
     3361 tgtaacgatc aaacaaggta accgttcgat ttgggcggat caggtgcggg ttgagcaaga
     3421 tggcgaaaat gcccgaatgg cgtatttgca gggtaatttt aactaccaag ataatttgat
     3481 tcaggcaacc ggttcagatg cgaccatcaa tctgctttcc aaagatgcga atttagctaa
     3541 tgctaattac caattaattg gcagacaagg gcgtggcacg gcagaatccg gtgaattcgg
     3601 caacagcaaa cacacgctga aaaatgccag tttcacttcg tgcttaccga atgataattc
     3661 gtggcaaatt gaagcgaatg aaatgattca gcacgttgat gaagaatatg cggaaatgtg
     3721 gcacgcccgt tttaaagtgc tgggaatgcc ggtattttat tcgccttact tacaatttcc
     3781 gattggcgac cgccgccgta gtgggttatt aattccaagt tttgagcgtt caagcaaaaa
     3841 cggctggaca tattcgcaac cgttttattg gaatatcgca ccgaatatgg actcgaccat
     3901 cactccaact tactattcac gccgtggttg gcaaatcagc ccggaatttc gttatttaac
     3961 gaaaatcggg caaggcttag tggcaaccga atatatggcg aaagatcgtt taagcgagta
     4021 ccaaccggga aatgatgatc gtaaacgcta tttattccac tggcgtcacg caatgagttt
     4081 tttaaccgat tggcgtttct cggtcgatta caccaaagtg agcgacagac gttatttctc
     4141 tgattttgat tcggattatg gtagcagtac tgatggctat gcgacgcaga attttaaatt
     4201 aggctactat cagccgaatt ataatatctc aatttcaggt aaaaaattcc aaaccttcga
     4261 tgagttggat atcgggcctt atcgcgttct gccacaaatt gattttaact attataaaaa
     4321 cgatctaatt aaaggcggag atttcaaatt ctttgcccaa gcagcccgtt ttgaaaatga
     4381 tagtaaatta atgccaaaag cgtggcgttt ccacgctgag ccaacactga atttcccatt
     4441 agcgaaccgc tatggtagct taaatttaga aaccaagctc tatgcaacct actatcaaca
     4501 aacgaaaggt agtgagagta cggaagaaat taagaaaagt gtaagtcgtg tactgccaca
     4561 gattaagctc gattttaaaa ccgtgttgga atccgataaa cagcttttct ctggctatac
     4621 tcaaacgctt gagcctcggg tgcaatatat ttatcgccca tataaggatc aaagcgatat
     4681 tggctcgaaa gcacatcgaa gtgtgagctt aggctatgac tctgcattat tgcaaaacga
     4741 ctatttctca ctgtttaatg acagacgtta tagcggttta gatcgtattt cgtcagcaaa
     4801 tttagtcacc gcaggtggca caacccgttt ctttaaagag gcaaccggtg aagaggtgtt
     4861 taatttcagc ttaggacaaa cttattatat aagcccgtct aaaattgatg atacctcaga
     4921 taacagcact aaaggtcata cgacttcatg ggcagcggaa tctaactgga aattccataa
     4981 gaattggaat tggcatggta gctatcaata tgatactcgt ttaaaccaaa cggcgttagc
     5041 gaatatgtca ttgcaataca aaccacagtc agacaaattg attcagctta attaccgcta
     5101 tgcaagtaaa gattacatca atcaaaactt gaacacgaat aagtatgggc aatccattaa
     5161 acaagtgggc ggtgtgctag gttgggaatt aaccgataaa gtgtcggtaa tgaccagtta
     5221 ttaccacgac cttgcattga aaaaaccggt ggaagggcaa atttcgctta actacaacac
     5281 ttgctgttgg gcggcaaatg tgtatgtggc tcgtcgctta gtttcaacgc cggtaggttc
     5341 atctgatacg atcaatgatt tctactatga caataaattc ggcattaact ttgagctacg
     5401 ctttggcaca aactacagca atggtgtaac ccgtatgcta aaacgaggta ttattcctta
     5461 caccgagccg tatagcatta attaacaaag taaaaacaaa taagtaaaaa tacaaatcgg
     5521 ggcgaaaaat atttgccccg atttttttat atttggctga taagcggtta aattctgttg
     5581 gaattttgca aatcttccgc taaattcaac cgcttgccat cgaaacttaa cctgtatttc
     5641 gcatacctgc ggcaatacct gtgatggtga tcatcaatgc ttgctctagt acaggatcag
     5701 cattttcacc ttgtttgcga atcctatcta acaattctac ctgaagtaga ttgagcggat
     5761 cggtataaat attgcgtagt gcaatcgatt ctgcgatcca aggtaaatcg gccattaatt
     5821 gtccatcgtg agccagtgca agtacggttt taagatcagc ctgtagttgc gtacgcaaca
     5881 tattgcctaa acggtgtagt tttggctcga ctaggcgttg gtcgtaatat tccgccagcc
     5941 aaatatcagc tttactaaat accatttcca gcattccgat acgggtcgag aaaaacggcc
     6001 attcgttaca catttctttt agtaaggttt cattaccttc atcaatcaac tgttgcaatg
     6061 cttgccctgc acctaaccaa gcaggtagca ttaagcggtt ttgcatccaa gcgaaaatcc
     6121 aaggaattgc acgcaaactc tccactccgc cttttggatt acgttttgca gggcgtgagc
     6181 caagcggcag acgggaaagt tcttgctctg gtgtagcaga gcggaaatac ggtacgaagt
     6241 ctagctcgcc acgcaccata tcacggtaaa tttggcaaga aatatcggag gcttttgcta
     6301 gcacatctcg ccattgctgc tttggctccg gtggtgggaa aatattcgct tctaaaatcg
     6361 cactggcata gagttctaaa ctttcaactg ccacggcagg taagcctaat ttaaagcgga
     6421 tcatttctcc ttgttcggtc actcgtaagc catttttgag tgagcgaggt ggctgagaaa
     6481 gtaaggctgc gtgagccggt gcgccaccac gcccgatagt accaccacga ccgtggaata
     6541 aggttaattc aatattatat ttttcacata aattaaccag agcttcttgc gcccgatatt
     6601 gcgcccagcc ggcagcaaac attccggcat ctttggcgga atcagagtag ccgatcataa
     6661 tcatttggta attgttgatg acgccacgat accagccgat attaaataaa tcggtcatca
     6721 ctttttcact atgatctaaa tcgcctagcg tttcaaataa tggggcaacc ggaatagtaa
     6781 atttgcaccc cgcctctttg agtaaaaggt gaaccgagag tacatcagag gcctctcttg
     6841 ccattgaaat gacataggct gaaatgacac cttcaggttg ctcggcaaca attttacaag
     6901 tgtctaacac ttctttagtt tcagggcttg gagtccagtt ggttggaatc aatgggcggc
     6961 gagaactgag ttcacgcact aagaatgcct gtttatcatc ttccgtccag tgagcataat
     7021 cgcctaagcc gatatagcgg gtaatttctg caatcgccat ttcgtggcgg gtactttctt
     7081 ggcgaatatc taagcgtgat aaacctaaac caaaacagtt tatacgacgt aagcaatcta
     7141 gtaatgcacc atttgcaata attcgcatac cacaggcttg taatgactca tagcaatcaa
     7201 aaagcggttc ccacaattgc tgatctgaag ttaaaatgtc actttcatca atagttgaaa
     7261 ttttaccttc caataattcc gcatagtaaa tttcggtatt aattaatttc tggcgtaata
     7321 cttttagtaa tacgcgatat ggctctaaat ggttgccata tttagcacga aatgcagggg
     7381 tacactgtgt aatcgataat tcttcagcaa gatttttaat atcttgtaag aacaattccg
     7441 tggctttcca acggttcatt cttaatacac ggcgagttgt ttctgccgtg acgaacgggt
     7501 taccgtcacg gtctccgccc atccaagaag aaaaacggac aggggctaaa tttaccggat
     7561 attgcacacc aaagtgtttt tctaaataga agttaagctg acggcaaaat tccggcacgg
     7621 ctttccataa actattttca atgactgcca taccgccttt ggcttcatca acaggggttg
     7681 ggcgttgggt tctgatttca ttagtatgcc aagcaagggc aatcagttgc attaaacggc
     7741 gcttgatttt atagctttct gcctcagtta aatcatcatg ttccaacaaa ttcaaacatt
     7801 tattgatttc aacgtgttta tgccccagcg aacggcgggt tacttccgtt gggtgagctg
     7861 ttagcactaa atcaatcatt aggctttcca cggttttaat cactttttca acggggatat
     7921 tttgtgattt tagacgaagg aacagagagt ctaatgagcg actaccaagt gattcatcaa
     7981 tatgatggcg agaaacagtt tgatgttgtt cagcaatatt tgttagattt agaaaatggc
     8041 taaatgcacg tgcaacgggt aagacatcat cgttagaaat attggctaat ttatctaata
     8101 gctgttcacg ggcgttttca tcgccggcac gagaattgcg agataacaca cgaatgcttt
     8161 cgatgagttc tagaatgtaa tttccttgcg catcacgaat cgtttctccc aaaaattcac
     8221 ctaacatatg gatattatgc tgaattgttg aatattgctg gttcataaaa aattcct
//
LOCUS       DANLXO010000111         8151 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.111, whole genome shotgun sequence.
ACCESSION   DANLXO010000111 DANLXO010000000
VERSION     DANLXO010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8151
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.111"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            52..810
                     /gene="ftsN"
                     /locus_tag="PXD69_002255"
     CDS             52..810
                     /gene="ftsN"
                     /locus_tag="PXD69_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HDL6284407.1"
                     /translation="MLMRIIGVILFFGIGLWFLKSSAPVPTVPSAPQPANSQTKSELP
                     SRPEETWSYIRDLETRTVITDNSQTSQERLAQLTAEQKQQIEERRKQEEARLAAEQAQ
                     QKPATDVSATELAPKTEEVKSLTEEELAAKKAQEQALAQKQAEEKRRQAELKKQQEAK
                     KEQPAKIVASAATLADKAANQAGKFGLQCGAFKNKAQAENMQARLAMAGFNARIASSA
                     DWNRVFVGPIGDRAATSRAQSNARSVAECVIVAM"
     gene            complement(852..2033)
                     /locus_tag="PXD69_002256"
     CDS             complement(852..2033)
                     /locus_tag="PXD69_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL6284408.1"
                     /translation="MKTELDMIVIGGGMIGAATALGLAKQGLRLALLEKNPLPTFNPD
                     SDYDLRISAISMGSIQLLEKLGVWEQIVAMRSTPYTQLETWEIDGFNTLFSAADLGLE
                     KLGDMVENNVIQIALWEQLKQYPNCLQAVGFEQIFANKAGEYWEVTVDGNTFAAPLLI
                     AADGANSQVRQWAGIGLTAWQYRQHCLLATVTTEKPAPSGTWQQFYPTGPRAFLPLSG
                     NHGCVVWYDSPQKIAELKMLPAEKLGVAIEQHFPSRLNAELGNIQVQASGAFPLTRQH
                     AQHYVQNGVVLVGDAAHTINPLAGQGVNLGFKDVKTLLEVIEQAVKKGKNFASEQVLQ
                     RYEQKRKPDNLLMQTGMDVFYKAFKTDLLPLKIARNVGLVLADKVSPIKKQALKYAIG
                     I"
     gene            2140..2478
                     /locus_tag="PXD69_002257"
     CDS             2140..2478
                     /locus_tag="PXD69_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284409.1"
                     /translation="MSCKTHANHEHEHGEGCGHTAIKHNDHIDYLHDGHLHHNKHGDH
                     YDEHVLEVNETNPADCNAAHCCGDHVHGEVCGHEAVPHGDHIDYIVNGRLHHQHGDHC
                     DDHGPVEIVK"
     gene            2610..3479
                     /locus_tag="PXD69_002258"
     CDS             2610..3479
                     /locus_tag="PXD69_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDL6284410.1"
                     /translation="MTLAIVYSRASIGVEAPLVTIEVHISNGQPKLTIVGLPEATVKE
                     AGDRVRSALLNANFIYPPQRITINLAPADLPKEGGRFDLPIAIGILAASGQIDSDLLT
                     QFEFLGELALTGHLRGVHGTIPAVISADKAKRQMILAKQNANEASLVSNATTYFAGSL
                     LEVVNMLNKRDKLPICQHISQHSAEIRPLVSRDLTDIIGQQHAKRALMIAAAGQHNLL
                     FLGPPGTGKTMLASRLADLLPEMTDEEAIETASVTSLVQNELNFQNWKQRPFRSPHHS
                     ASMVALVGGGCEN"
     gene            3571..5382
                     /locus_tag="PXD69_002259"
     CDS             3571..5382
                     /locus_tag="PXD69_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284411.1"
                     /translation="MFYLNNDNFKREPYRGYCPSHLEKLFTKPHLDIRGNGYYYPDNE
                     YVVAWYESDFIFKSRKAQAHAKVKLVNLTCPKYTGKNSAEYLSVLYISVPLNYLHYFT
                     IGSIWKGGVAKEQFALEEFYITVEAENQDGKRENLSIVSFGESEENGLEKPFDYTIYT
                     IPTEYHNYGDDLNRLLSISYQNQKFIIHPLHIFMMHYGYSTDIKRILATYPLDEVRER
                     LFIDKVVENFDVERYVVLPKYFVKKDAIFLYHFKYDEETTGTRVKKLVSQFRLNIHNQ
                     THPIEIDFWHTQKVELKIRGVRLGNAVLCAEIIGLNQPEGEDITLVLSQSKREKSGNK
                     TEEQNNEVNNVPITRVYTREPELDELPLTDNSPDNRTVEYNKRQFELLGRQRQIRALK
                     KAREESNQKMKALTPDEIDSLGVGESDGRNGKVGLAFCFLDDTPVGKSSKLYKLWQHA
                     KAVAEWNHGEAHWYTPNLGFRNDDELLPVSLETNKCFDYPEIAIIIRLQIYGETFFLI
                     DFSMKQRDISIRGLGYKPDPNEDFLYESDMSKSELSELLSAVHHHEHLPKEYIEKKNK
                     EKTKLTTFNHSEAESSNWAYNAVQKLTSRAITKPTYF"
     gene            5391..>8151
                     /locus_tag="PXD69_002260"
     CDS             5391..>8151
                     /locus_tag="PXD69_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDL6284412.1"
                     /translation="MNAEQRVIVTPTFWGKFFGKIKSVELQQNKVIVTDKKNNITEHD
                     LGKTFDFPAIQKSFFGTKLFFKDDSTEVVLSKLAKKQTDSLLLEIEKVVASNIKVKVK
                     EGFQHFANLAENQYLRDSDIPTLNDRVRLSVLSYGDNKEHFQKYFDESLVKKIQYISS
                     LFPVNAINAQTIRREYEQHVLNHRKHFFDVIESNPLTEQQRLSVIRNNDINMVLAAAG
                     TGKTSVMVAKALDLIDSGACKSEDILILAYNRDAATELSERLQERAREANLDLENSPS
                     ISTFHALGRRIIKECGKSVHLSKFAEDPMKLDRWFNKWLEDYIKEDPDNLAKFIQLAY
                     QPIDPFQFKTKDEYDRYVNDNDYRTLQGERVRGYQELLIANWLFSHSVEYEYEPRYVS
                     KRRIEIGFDYKPDFSLGDGVYLEHFGIDRQGRTRADINAQEYNANIQRKRELHAEHNT
                     TLLETYHYNWVENTLYKRLEQLMNEQFIPLKPKSQQEILDALNESGIFKENKNRYLKC
                     LQAIRTERLDYQQILKRLTDAKIVYAKEYATLLMRIHDAYVKELRSANEIDFDDMILL
                     ATQLVKTGEFKPKWKHILVDEFQDISMARLELLKEIYTKGPRPIWTVVGDDWQSIYRF
                     SGGKLEVTTRFNDMVGSHTLSKLEKTYRYNNSIADTAGQFIMQNPEQYQKNVVTHTKV
                     ADSCVHLYDSHVVKDEKSEANISLKASAILKLIRQKAPEATVAILARYRYLLEDAKSV
                     IKDKNVKFWTFHGSKGLEADYCILLGFFQGKVGFPNQNKEEAVVEALLPMLDSFPHSE
                     ERRLFYVALTRAKKESYLIADANAPSEFINELLSPKYKIDIVSKRFQERYRTIFKCNE
                     CSTGYFVMKQGKFGQFYSCTSGEVCRSSPRICEKCGRPMKLREGKFGQFWGCSGYGIK
                     GDQCTN"
BASE COUNT         2604 a         1665 c         1715 g         2167 t
ORIGIN      
        1 tccaacgaga aaaaaagtaa aaaaaatcaa aaagaaagta atgttaaaaa gattttaatg
       61 cggattatcg gggtaatttt attcttcggt attggtttat ggtttttgaa atccagtgca
      121 cctgtaccaa cagttccgtc agcaccgcag cctgctaatt cacagactaa aagcgaatta
      181 ccaagtcgac cggaagagac gtggagctat attcgtgatt tagaaacccg tacggtaatt
      241 accgataata gccaaacttc acaagaacgt ttggcacaat taacggcgga acaaaagcag
      301 caaattgaag aaagacgcaa acaagaagaa gcacgcttag ccgctgagca agctcaacaa
      361 aagcctgcga ccgatgtatc tgctacagaa ttggctccga aaacagagga agttaagtcg
      421 ttaacggaag aagaattagc agcaaaaaaa gcacaggagc aagctttagc acaaaagcaa
      481 gcggaagaga aacgcagaca agcagagctt aaaaaacagc aggaagcgaa aaaagagcag
      541 ccggctaaaa ttgtagcaag tgctgcaaca ctggcagata aagctgcaaa tcaggcgggt
      601 aaatttgggt tacagtgcgg tgcatttaaa aataaagccc aagccgaaaa tatgcaagca
      661 agattggcaa tggcaggttt taacgcccgt atcgcaagca gtgccgattg gaaccgtgtt
      721 tttgtcggcc cgataggtga cagagcggca acttccagag ctcaatccaa tgcacgcagt
      781 gtagcggaat gtgtgattgt ggcgatgtaa aattgattga aatattgaag agagctatag
      841 gctctctttt tttatatccc aatcgcatat ttcaaggctt gctttttgat gggtgacact
      901 ttatcagcca atactaaacc gacattgcgg gcaattttga gcggtaataa atcggtctta
      961 aacgctttat aaaacacgtc catgcctgtt tgcatcagta aattatccgg tttacgtttt
     1021 tgctcatagc gttgaagcac ctgctcactt gcaaaatttt tgcctttttt gaccgcttgt
     1081 tcgatcacct caagcaaggt tttaacatct ttaaagccta aatttacacc ttgtccggca
     1141 agcggattaa tggtgtgagc cgcatcgccg actaatacca ccccgttttg cacatagtgc
     1201 tgagcgtgct ggcgggttag cgggaaagcc cctgaagcct gcacctgaat gttgcctaat
     1261 tctgcgttga gccggcttgg gaaatgttgc tcaatcgcaa ctcccagctt ttctgctgga
     1321 agcattttca gttcggcaat tttttgtggt gaatcgtacc aaacaacgca gccgtgattg
     1381 ccggaaagcg gtaaaaaggc tcgagggccg gttggataga attgttgcca agtgccgctt
     1441 ggagcaggtt tttcggtggt aacggtggcg agtaaacagt gttggcgata ttgccaagcg
     1501 gttaaaccaa tgcccgccca ttggcgaacc tgtgaatttg caccgtctgc ggcaatcagc
     1561 agtggggcag caaaggtgtt gccatcaacc gtcacttccc aatactcgcc cgctttattt
     1621 gcaaaaattt gctcaaatcc gaccgcttgt aggcagtttg gatattgctt taattgctcc
     1681 cataacgcaa tttgaataac gttgttttcg accatatcgc cgagcttttc caaacccaaa
     1741 tcagctgccg aaaaaagagt gttgaatcca tcaatttccc aggtttcgag ctgggtataa
     1801 ggggtgcttc tcattgcaac aatttgctcc cacacgccca atttttctaa cagttgaatc
     1861 gagcccatac taatggcgga aattcgcaaa tcgtagtctg aatcaggatt aaaggtcggc
     1921 agagggtttt tctccaacaa ggctaaacgc agcccctgtt ttgctaagcc tagagctgtt
     1981 gctgccccaa tcataccgcc accgattaca atcatatcta attcagtttt cattttttct
     2041 tcctttttag ttaggcaaaa tactgctaaa acgccttgaa ttgtagtgca tttcagatta
     2101 ggatcaaacc gatttatcta tttatctaag gagcgtttta tgtcttgcaa aactcatgca
     2161 aaccacgagc acgaacacgg cgaaggctgt ggtcatactg ctattaaaca taacgaccat
     2221 atcgactatt tacacgatgg gcatttacac cacaacaaac acggcgatca ctatgacgaa
     2281 cacgttttag aagtgaatga aaccaacccg gcagactgta atgccgccca ttgctgcggc
     2341 gaccacgttc atggtgaggt ttgcggacac gaagctgtgc cgcacggcga tcatatcgac
     2401 tacatcgtga atgggcgttt gcaccaccaa cacggcgacc actgcgatga ccacgggccg
     2461 gttgaaattg tgaaataaga tttttgatgg gaggttttag cctcccatta ttatttttgc
     2521 gatctcgctc gaaaaattga acattcctgc tacccctctt ccgattttcc ttttatgctc
     2581 tcggtattga tttctaatac cgaaatgtga tgaccttagc gattgtttac agccgagcct
     2641 ccattggcgt tgaagccccg ttggtgacga ttgaagtgca tattagcaac ggacaaccaa
     2701 aattaaccat tgtcggcttg cccgaagcca cagtgaaaga ggctggtgat cgtgtgcgga
     2761 gtgcgttgct gaacgctaat tttatctatc cgccacaacg gatcacgatt aatcttgctc
     2821 cggcagattt acccaaagaa ggcggacgtt ttgacttgcc gattgcgatt ggcattctgg
     2881 cagcctcagg gcaaattgat tctgatttat taacgcagtt cgagtttttg ggcgagttgg
     2941 cactgacagg gcatttgcga ggagtgcacg gcacgattcc ggcagtgatt tctgccgata
     3001 aagccaaacg gcagatgatc ttagccaagc aaaatgcgaa tgaggcatcg cttgtttcca
     3061 atgccaccac ctactttgcc ggctcgttgt tggaggtggt aaatatgctc aacaaacggg
     3121 ataaactgcc gatttgtcag cacatttcgc aacattctgc cgaaattcga ccgcttgtca
     3181 gccgagatct tactgatatt atcgggcaac aacacgccaa gcgagcctta atgattgccg
     3241 ctgccgggca acataatttg ctgtttctcg gaccaccggg aacgggtaaa acaatgttgg
     3301 caagccggct ggcggattta ctgccggaaa tgaccgatga ggaggcgatt gaaaccgcct
     3361 cggtgaccag ccttgtgcaa aatgagctga attttcagaa ctggaaacaa cgcccgtttc
     3421 gttcgcccca tcacagtgca tcaatggtgg cattagtggg aggtggctgt gaaaactaga
     3481 aataaatgtc aaaaacaaga aataaatgtc acaaatcttt ctctaatttc gctataattc
     3541 gatcatcaaa actttaaggg gaaatccgtt atgttctacc tcaataacga caatttcaaa
     3601 cgagaacctt atcgtggata ttgtccgagt caccttgaaa agctttttac taaaccacac
     3661 cttgatatta gaggtaacgg ttattattac cctgacaatg aatatgttgt agcttggtat
     3721 gaatcggact tcattttcaa atcaagaaaa gctcaagcac atgcaaaagt aaagcttgtt
     3781 aatttaactt gccccaaata cactggcaaa aacagtgctg aatatttaag cgttttgtat
     3841 atctccgttc cccttaatta tctacattat ttcactatcg gcagtatctg gaaaggcggt
     3901 gtcgccaaag agcagtttgc tctcgaagaa ttttacatta cggttgaagc tgaaaatcaa
     3961 gatggtaaac gagaaaacct ctcaatcgtt tcattcggtg agagtgagga aaacggttta
     4021 gagaaaccat ttgattacac aatctacact atccccacag aatatcacaa ctacggtgat
     4081 gacctaaacc gactactttc catctcttac caaaatcaaa aattcattat ccatccgcta
     4141 catattttta tgatgcacta cgggtactct acggacatca agcgtatctt ggcaacatac
     4201 ccacttgacg aggtaagaga acgcctattt atagataagg tcgttgagaa ttttgatgta
     4261 gagcgttatg tcgttttacc gaaatacttt gtaaaaaaag atgcgatttt cctctatcac
     4321 ttcaaatatg acgaagagac tacgggaaca agggtaaaaa agcttgtaag ccagtttagg
     4381 ttaaatattc acaatcaaac acatccaata gaaatagatt tttggcacac gcaaaaggtt
     4441 gaattgaaaa tccgtggtgt tcgacttgga aatgctgtgt tatgcgcaga aattatcggt
     4501 cttaatcagc ccgaaggcga agatattacg ctagtgctat ctcaatcgaa aagagaaaaa
     4561 tcgggtaata aaaccgagga acaaaataac gaggtaaata acgttcctat taccagagtt
     4621 tatacacgag aacctgaatt ggatgagtta ccactcaccg ataactcccc agataatcga
     4681 acagtcgaat acaacaagcg acaatttgaa ctcttgggcc gtcaacgcca aatcagagcg
     4741 ctcaagaaag cacgcgaaga gagtaatcag aaaatgaaag ccttgactcc agatgagata
     4801 gactcactgg gtgtaggtga atcagatggc cgaaacggta aggttggact cgctttctgt
     4861 ttccttgatg atacacctgt tggcaaaagc tccaaactat acaaattatg gcagcacgcg
     4921 aaggctgttg cggaatggaa tcacggtgag gcgcactggt acacgcctaa tctcggtttt
     4981 agaaatgacg atgaactcct tcccgtttcc ttagaaacca acaaatgttt cgactaccct
     5041 gaaatcgcga taattatccg cctccaaata tacggagaaa catttttcct gattgatttc
     5101 tcaatgaagc aaagagatat aagcattcgt ggcttagggt ataaacccga tccaaacgaa
     5161 gattttctct atgaaagtga tatgagcaaa agcgaattat ccgaattatt gtccgcagtt
     5221 catcatcatg aacatctgcc aaaagagtac atagagaaaa agaacaaaga aaaaaccaaa
     5281 ctcactacat ttaaccatag cgaagccgaa agtagtaact gggcttataa cgcggtgcaa
     5341 aaattaactt caagggcaat tactaagccg acatattttt aattattttt atgaatgcag
     5401 aacaacgtgt aattgttact ccgacatttt ggggtaaatt ttttggaaaa attaaaagtg
     5461 ttgaacttca acaaaacaaa gttatcgtaa ctgacaaaaa gaataatata actgaacatg
     5521 atttaggaaa aacttttgac tttccagcta tccagaagtc tttctttggt actaaattat
     5581 tttttaaaga cgatagcaca gaagttgttt tatcaaaact tgcgaaaaaa caaactgata
     5641 gtctattact tgaaatcgaa aaagtagttg catctaatat taaagtgaaa gtaaaagagg
     5701 gttttcaaca ctttgcaaat ttagccgaaa atcaatatct cagagattcc gacattccta
     5761 cattaaatga tcgtgtaaga ttgtcagtgc tttcctatgg ggataacaaa gaacattttc
     5821 aaaaatactt tgatgaaagt ttggttaaga aaattcaata tatctcttca ctttttcctg
     5881 taaatgccat aaatgctcaa acaattcgaa gagaatacga gcaacatgtt ttaaatcatc
     5941 gcaagcattt ctttgatgtc attgaatcta atccgcttac tgagcaacaa agattgtcag
     6001 tcattcggaa caacgacatc aatatggttc ttgctgccgc ggggacagga aaaacgtctg
     6061 taatggtcgc aaaagcattg gacttaattg attctggtgc ttgtaaaagc gaagatattt
     6121 tgattcttgc atacaaccgc gatgcagcaa ccgaactatc cgaacgctta caagaacgtg
     6181 cacgagaagc caatttagat ctggaaaata gccctagcat ctcgactttc catgcgcttg
     6241 gccgaagaat tattaaagaa tgtggaaaat cagtccactt gtcaaaattt gccgaagatc
     6301 cgatgaaatt agatagatgg ttcaacaaat ggctagagga ctacatcaaa gaagatcctg
     6361 ataatcttgc aaaattcatt caacttgcat accaacctat cgatccattc caattcaaaa
     6421 cgaaagacga atacgataga tatgtaaatg acaatgacta tcgaacctta caaggcgaac
     6481 gcgttcgtgg ttatcaagag ttattgatcg cgaactggct ttttagccac agcgtagaat
     6541 atgagtatga accaaggtat gtatcaaaac gccgtatcga gattggtttt gactacaaac
     6601 ccgatttctc tttgggtgat ggtgtttacc ttgaacattt cggcattgac cgacaaggta
     6661 gaactcgcgc agatattaac gcgcaggaat ataatgccaa tatccaaaga aaacgtgagt
     6721 tacacgccga acataataca acattactgg agacatacca ctacaactgg gtggaaaata
     6781 cgttatataa acgactagag caattgatga atgaacagtt cattcctctg aagccaaaat
     6841 cacaacaaga gattttagat gcactcaatg aatcaggaat cttcaaagaa aacaaaaatc
     6901 gctatttgaa gtgccttcaa gctattcgta cagagcgatt agactatcaa caaatcttaa
     6961 aacgtctaac cgatgcgaaa attgtctatg ctaaagaata tgcgacattg ctcatgcgta
     7021 ttcatgatgc ctacgttaaa gaactacgta gcgcaaatga aatcgacttt gacgatatga
     7081 ttttgttggc tactcaactg gtgaaaacag gtgagtttaa acctaaatgg aaacatattt
     7141 tagtcgatga atttcaagat atttctatgg ctcgattgga gttattgaaa gaaatttata
     7201 ctaaagggcc tcgaccgatt tggactgttg ttggagatga ctggcaatca atctatcgtt
     7261 tctctggcgg taaactagaa gttactacgc gatttaatga tatggtcggc tcacacacgc
     7321 taagtaaact agaaaaaacc taccgctata acaatagtat tgctgacaca gcaggtcaat
     7381 tcattatgca aaatcctgag cagtatcaga aaaatgttgt aacgcataca aaggtcgctg
     7441 attcttgtgt tcatttgtat gactctcatg tcgtaaagga tgaaaaatca gaagccaata
     7501 tcagtttaaa agcctcagca atattaaaac tgatacgtca aaaagcacct gaagccactg
     7561 tcgcaatttt ggctagatac cgttaccttt tagaagatgc aaaaagtgta atcaaagata
     7621 agaatgttaa attttggacg ttccacggct caaaagggtt ggaagcagat tactgcattt
     7681 tacttggttt cttccaagga aaagtcggat ttcccaacca aaataaagaa gaagccgttg
     7741 tagaagcatt gcttcctatg ctagacagtt ttccacactc agaagaacgt aggttatttt
     7801 atgtggcatt aacgcgtgcg aaaaaagaaa gttatttgat cgcagatgcg aacgcgccat
     7861 cagaatttat caatgaatta ttatcaccga aatacaagat agatattgtg tcaaaacgat
     7921 tccaagaacg ttatcggaca atctttaaat gtaatgaatg tagcactggc tatttcgtga
     7981 tgaaacaagg taaatttggt cagttctatt cttgtacatc aggggaagta tgccgctctt
     8041 cgccacggat ttgtgaaaaa tgtggccgtc ctatgaagct gcgagaaggt aaatttggtc
     8101 agttttgggg atgctcagga tatggaatca aaggcgatca atgtacgaat a
//
LOCUS       DANLXO010000112         8095 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.112, whole genome shotgun sequence.
ACCESSION   DANLXO010000112 DANLXO010000000
VERSION     DANLXO010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8095
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.112"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(100..780)
                     /gene="can"
                     /locus_tag="PXD69_002261"
     CDS             complement(100..780)
                     /gene="can"
                     /locus_tag="PXD69_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HDL6284413.1"
                     /translation="MEKIERLFANNHAWATKMKDEQSDYFKELAEHQKPTYLWIGCSD
                     SRVPAEKLTGLGPGELFVHRNVANMVIHTDLNCLSVVQYAVDVLEIEHIIICGHTNCG
                     GINAAIAQKELGLINNWLLHIRDIWFKHSHLLGKLPYEERSNVLTRLNVAEQVYNLGQ
                     SSIIKTAWEQGKSLSLHGWVYDVTDGFLIDQGVMATSRETLEITYRNAIAKITTEANE
                     KIVLNDEN"
     gene            complement(894..3029)
                     /gene="pta"
                     /locus_tag="PXD69_002262"
     CDS             complement(894..3029)
                     /gene="pta"
                     /locus_tag="PXD69_002262"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005542370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDL6284414.1"
                     /translation="MSRTIILIPISTGVGLTSVSLGLVHALEQKGSKVGFLKPISQPI
                     SGEDTLDRSTTIIRAEQTTEVGEPFMLSEAETLIGQNQTDVLLEKVVERHQKLSKNNE
                     IVIVEGLIPTRKNSYANSINYEMAQALDAEIVLVAAPASDTPAQLKERVEAAASQFGG
                     RNNPNLLGVIINKFNAPVDDSGRTRPDLTEIFDSFQHSNNNVSEVEHLFAKSPIKLLG
                     CISWKAELIATRAIDVAKHLGASIINEGEIKARRIRGVTFCARNLPNMVDHFKAGSLL
                     VTSADRPEVLVAASLAVMNGIEIGAILLTGGYKIDSSIAKLCQQAFETGVPVFRIEGN
                     TWQTALSLQSFSLEVPVDDKERIAAIKEYMASKFNVGFIDEVSKAATRARRLSPAAFR
                     YQLTEYARQAKKRIVLPEGDEPRTVKAAALCAERGIAECVLLANPTDVQRVAEAQGVV
                     LGKGVTIIDPASIRENYVDRLVELRKAKGMTEVVAREQLLDTVVLGTMMLEANEVDGL
                     VSGAVHTTANTIRPPMQIIKTAPGSSIVSSIFFMLLPDQVLVYGDCAVNPDPTAEQLA
                     EIAIQSAESAKAFGIDPRVAMISYSTGTSGSGADVEKVKEATRIAQEKRPDLIIDGPL
                     QYDAAIMEDVARSKAPNSPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGM
                     RKPVNDLSRGALVDDIVYTIALTAIQATQ"
     gene            complement(3082..4290)
                     /locus_tag="PXD69_002263"
     CDS             complement(3082..4290)
                     /locus_tag="PXD69_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDL6284415.1"
                     /translation="MSKNLILILNCGSSSLKFAILDPKTGDEKLSGLAEAFHLEDARI
                     KWKLNGEKGNADLGAGAAHSEALTFIAEKLLSDELKAGIGAIGHRIVHGGEKFTSSVV
                     ITDEVIKGIEDATQFAPLHNPAHLIGIKEAFRIFPELKDKNVAVFDTAFHQTMPEHAF
                     LYALPYTFYKENGIRRYGFHGTSHFYITSQVAELAGKSVEQTNAIICHLGNGGSVSVV
                     RNGKCIDTSMGLTPLEGLVMGTRSGDLDPAIISFLYNNLGMSMDEIDTTLVKKSGLLG
                     LTGVTSDCRYAEDNYNDVSKPEAKRALDVYSYRLAKYIGSYMAILGDDHLDAIAFTGG
                     IGENSGLVRELTLNHLKLFGIKLDQERNLAARFGKDGVITADESTFKAVVIPTNEELV
                     IAQDTAKLAL"
     gene            4531..6507
                     /gene="cpdB"
                     /locus_tag="PXD69_002264"
     CDS             4531..6507
                     /gene="cpdB"
                     /locus_tag="PXD69_002264"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HDL6284416.1"
                     /translation="MLNRRKFIQLGATAMLVLGTQPSAFAQTAKNKAGLRVIATTDIH
                     GFLTDFDYYKDAPTEKFGFTRTASLIKQARAEVKNSVLVDNGDLIQGNPISDYQSTKG
                     AKEGKPEPSIMALNAMQYEVGTLGNHEFNYGLSYLDNAIKQAKFPIVNANIVKPGTDE
                     PFFTPYVIQQKEIVDEKGNKHTIKIGYIGFVPPQVMIWDKANLEGKVEARDIVKTAQK
                     YVPIVKKEGADIVVALAHTGPSDEPYKEGAENCAFYLADVKGIDAVIFGHSHRLFPNK
                     EFANSPNADIAKGTMKGVPESMAGYWGNNISVIDLSLAENDGKWGVVDGRAELRPIYN
                     TEEKKATVENHPEIVALLKETHEATRQFVSQPIGKATDNMYSYLALVQDDPTIQIVNQ
                     AQKAYVENVVKGLPELAGLPILSAGAPFKAGGRKNDPTGYTEVDKGELTFRNAADLYL
                     YPNTLVVVKATGAELKEWLECSAGMFKQIDVASDKPQYLLDWTGFRTYNYDVIDGVSY
                     QFDITQPARYDGECKLINPNSHRVVNLTFDGKPVDPKQEFLIATNNYRAYGAKFPGTG
                     DKHIVFAAPDENRQVLANYITTESKAHGQVSPKADNNWRIAPISSNAKLDIRFETSPT
                     DKAKAFIKENAQYPMEYIENDETGFAVYRIDLTK"
     gene            complement(6580..8058)
                     /locus_tag="PXD69_002265"
     CDS             complement(6580..8058)
                     /locus_tag="PXD69_002265"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDL6284417.1"
                     /translation="MDSILGKKINSTAIPSLLCDFYKTSHRIQYPEGSQFLYSTFTPR
                     SNIYAPFVTRVVSFGFQAFILKYLIHYFNDNFFSRSQHDVVSEYTQFISDTLNIEDSG
                     EHIAQLHQLGYLPIRIKAIPEGKSVAVKVPLMTIENTHSSFFWLTNYLETLINVSLWQ
                     PITSASIAFAYRKALAEFSEQTCDDNSHLPFQAHDFSMRGMSSLESAESSGAGHLTSF
                     LGTDTIPAISFVTAYYGSQHLIGTSIPASEHSVMSSHGVDELPTFRYLMAKYPNNMLS
                     IVADTTDFWHNITVNLPLLKQEILARPESAKLVIRPDSGDFFTIICGNNSSPVEHERK
                     GLIECLWDIFGGSINQKGYKVLNPHIGAIYGDGVTYDKMIRILEGLTAKGFASSNIVF
                     GVGAQTYQRNTRDTLGFAIKATSITINGVEKAIFKAPKTDNGLKKSQKGRVKVISYDH
                     YVDELTALDDFSDDLLEVVFENGKLVKSTNFDEIRQNIAQQF"
BASE COUNT         2572 a         1568 c         1547 g         2408 t
ORIGIN      
        1 tttgacgata acaggaatca ggaaaataaa aaaccatcaa acaatggttt tttataaaaa
       61 gattgtaaaa aaatcgataa atttaaccgc ttacaatggc taattttcat cgtttaaaac
      121 tattttttcg tttgcttcgg ttgttatttt agctattgca ttacgatagg taatttctaa
      181 tgtttctcgg ctagtagcca taacaccttg gtcaatcaag aaaccatctg taacatcgta
      241 tacccaaccg tgtagcgaga gggatttacc ctgttcccaa gcggttttaa taatagagga
      301 ctgacctaaa ttataaactt gttctgcaac atttaatcgg gtcaagacat ttgatcgctc
      361 ttcataggga agtttgccta gtaaatggct gtgtttaaac cagatatcac gaatatgtaa
      421 caaccagtta ttaattaaac caagttcttt ttgtgcaatt gccgcattga taccaccaca
      481 attagtgtga ccacagataa taatatgctc aatttctaat acatctaccg catattgaac
      541 aaccgacaga caattaagat cagtgtgaat caccatattt gctacatttc gatgaacaaa
      601 taattctccg gggcctaacc ctgtgagttt ttcagcaggc acacgactat cggaacagcc
      661 aatccataaa taggttggct tttgatgttc cgctaattct ttaaaataat ccgattgttc
      721 atctttcatc ttagttgccc aggcgtggtt attggcaaat aagcgttcaa ttttttccat
      781 aaattctcct ttttaacact aatcttgatt atatgattaa attgaaaagt cgggtaggta
      841 aaaaataaaa atgcccttag ttttaagggc atttggtttc atttgggagg gaattattgc
      901 gttgcttgaa tcgcagttaa cgcaatagta taaacgatgt cgtcaactaa agccccacgg
      961 gacaagtcat ttacaggttt acgcatacct tgtaacattg ggccgataga gactaaatct
     1021 gccgaacgtt gtaccgcttt ataggtggta ttaccagtat ttaaatccgg gaagacaaat
     1081 acagttgctt tacctgctac aggtgaattt ggtgcttttg agcgggcaac atcttccata
     1141 atcgccgcat catattgtaa tgggccatca atgattaaat ctggacgttt ttcttgggca
     1201 atacgagttg cttctttcac tttttctaca tccgcacctg aacctgatgt accggtagag
     1261 taggagatca ttgcaacacg agggtcaata ccaaaggctt tggcagattc tgctgattga
     1321 atcgcaattt ccgctagctg ttctgcagtt gggtcagggt ttaccgcaca gtcaccatat
     1381 accaatactt gatcaggtag tagcataaag aagatagaag atacaataga gcttcccggt
     1441 gcagttttaa tgatctgcat tggtgggcga atagtgttag cggttgtgtg aactgcgcct
     1501 gagactaaac cgtccacttc attagcttca agcatcattg tacccaatac aactgtatct
     1561 aaaagttgct cacgagcaac aacttcagtc attccttttg ctttacgcaa ttcaactaag
     1621 cgatcaacat aattttcacg aatgctcgca gggtcaataa tcgttacgcc tttacctaat
     1681 accacgcctt gtgcttcagc aacacgttgt acgtctgttg ggttagctaa taacacacat
     1741 tctgcaatgc cacgctcagc acataatgca gccgctttca cagtacgagg ctcatctcct
     1801 tcaggtaaaa caatgcgttt tttcgcttga cgggcatatt cggttaattg gtaacggaat
     1861 gctgcaggtg ataaacgtct tgcacgagta gcggctttag aaacctcatc aatgaaacct
     1921 acattaaatt tgcttgccat atattcttta attgcagcaa tacgctcttt atcatctaca
     1981 ggcacttcta agctgaagct ttgtaggctt aatgcggttt gccaagtgtt accttcaata
     2041 cggaatacag gcacaccggt ttcaaatgct tgttggcaaa gttttgcaat tgagctatca
     2101 attttataac caccggttag taaaatagca ccaatttcga tgccattcat taccgccaac
     2161 gatgcagcaa ctaacacttc aggacgatcc gcagaggtaa ctaataaact accggcttta
     2221 aaatgatcga ccatatttgg taagttacgt gcacagaatg tcacaccgcg aatccgacga
     2281 gcctttattt cgccttcatt aataattgaa gcgcctaaat gttttgcaac atcaattgct
     2341 cgtgtagcaa taagttctgc tttccagcta atacagccta acagcttaat tggactttta
     2401 gcaaaaagat gctcgacttc tgaaacatta ttatttgagt gttgaaatga atcaaaaatt
     2461 tcagtcaaat ctggacgggt tctacctgaa tcatctactg gtgcattgaa tttattgata
     2521 ataacgccca gtaaatttgg gttgttacgt ccaccaaatt gtgaagcggc agcttcaact
     2581 cgctctttta attgagctgg tgtatctgag gccggtgctg caactaatac aatttcagca
     2641 tcaagggctt gagccatttc atagttaatg ctgttagcgt atgagttttt acgcgttgga
     2701 attaaacctt caacaatgac aatttcatta ttttttgata atttttggtg gcgttccacc
     2761 actttttcta acaatacatc cgtttggttt tgaccgatta atgtttcagc ttcgcttaac
     2821 ataaacggct caccaacctc tgttgtttgt tctgctctga taatcgttgt tgagcggtct
     2881 aacgtatctt caccgctgat aggttgagaa atcggtttta aaaatcctac tttagaacct
     2941 ttttgctcca aagcatgtac taaacctaag ctaacactgg ttaaaccaac accagttgaa
     3001 atagggataa gaatgatcgt tctagacata atatttccaa attaaaagaa agtgaaaggg
     3061 cagaatatct gccccctatg attataatgc taatttagcg gtatcttgtg caatcacgag
     3121 ttcttcatta gttgggataa caacagcttt aaatgttgac tcgtccgctg taatgactcc
     3181 atctttacca aaacgggcag caaggttacg ctcttgatct aacttaatgc caaataattt
     3241 taagtgattt aaggttaatt cacgtactaa gcctgaattt tcaccgatac cacctgtaaa
     3301 tgcgatagca tctaagtggt catcgcctaa aattgccata tatgaaccaa tatatttagc
     3361 taaacgatag ctatatacat ctaaagcacg ttttgcttcc ggttttgata cgtcattgta
     3421 attatcttcc gcataacgac agtcactagt tacgccagtt aaacctaaaa gaccagattt
     3481 ttttactaga gtagtatcaa tttcgtccat tgacatacct aagttattgt ataagaaaga
     3541 gataatcgca gggtctaagt caccagagcg agtacccatt actaaacctt ctaatggagt
     3601 taaacccatt gaggtatcaa tacatttacc attgcgtaca acagaaacag aaccaccgtt
     3661 acctaagtgg caaataatgg cattggtttg ctcaacagac ttacctgcta attctgcaac
     3721 ttgtgaggtg atatagaagt ggcttgtgcc atggaaaccg tagcgacgaa taccattttc
     3781 tttatagaat gtatatggaa gtgcatataa gaatgcgtgt tccggcattg tctgatggaa
     3841 tgcagtgtca aatacagcta cgtttttgtc ttttaattca gggaaaatgc ggaatgcttc
     3901 tttaatacca attaaatgcg cagggttgtg taatggtgca aattgcgttg catcttcaat
     3961 acctttaatc acttcatcgg taattacaac tgatgaggtg aatttttcac cgccatgaac
     4021 aatacgatga ccaatcgcgc cgatacctgc ttttaattcg tcagataaca atttttcagc
     4081 aataaaggta agtgcttcac tatgtgcggc acctgcacct aaatcagcat tacctttctc
     4141 cccgtttaac ttccacttga tacgtgcatc ttctaaatga aaagcttcag caagtccaga
     4201 taatttttca tcacctgttt taggatctaa aatagcaaat ttaagagatg aactaccgca
     4261 gttaaggatt aagattaagt ttttagacat ggtcaaatta ccttatttta tgaaatgagt
     4321 ttgaagaaaa tactattttt attggtgtat ttaaggtgta aaggatacac ctttcagatc
     4381 ttaaaataaa tgcttgaact caaagaaaga taaaaatgtg tttaaaattt gatataacaa
     4441 gctataaatg tgaaaaaata tggcgaacaa gcggttattt ttctaaaata ttttacaatt
     4501 taccctttca tttcattaag gagatatttt atgttaaata gaagaaaatt tatccagctt
     4561 ggtgcaactg caatgcttgt attggggaca caaccgtctg catttgcaca aacagccaaa
     4621 aataaagctg gcttgcgtgt catcgccact acggatattc acggtttctt aactgatttt
     4681 gattattaca aagatgctcc aacagaaaag tttggtttta cccgtacggc aagcctaatt
     4741 aaacaagcta gagcagaagt taaaaacagt gtgttagtcg ataatggtga cttaattcaa
     4801 ggtaatccta tttctgacta ccagtcaacc aaaggtgcaa aagagggcaa acctgaacct
     4861 tcgattatgg cattaaatgc gatgcaatat gaagtcggaa cgctgggaaa tcatgaattt
     4921 aactacggtt taagctattt agataatgct attaagcaag caaaattccc tattgtcaat
     4981 gcaaacattg tgaagccggg gacagatgaa ccattcttta caccttatgt tattcaacaa
     5041 aaagaaattg tagatgaaaa agggaataag cataccatta agattggtta tatcggtttt
     5101 gtaccaccac aagtgatgat ttgggataaa gctaatcttg aaggaaaagt tgaagctcga
     5161 gatattgtga agaccgcaca aaaatatgtg cctatagtaa aaaaagaagg ggcagatatt
     5221 gtcgttgcat tggcacatac cggcccttca gacgaaccct ataaagaagg cgctgagaac
     5281 tgtgcgtttt atctagctga tgtaaaaggt attgatgcag ttattttcgg gcattcacat
     5341 cgcctgttcc caaataaaga atttgcaaat tcaccaaatg ccgatattgc aaaaggaaca
     5401 atgaaaggcg taccggaaag tatggctggc tactggggaa ataacatcag tgtgattgat
     5461 ttaagcttgg ccgaaaacga tggtaaatgg ggcgttgtgg acggtagagc agagttgcgt
     5521 ccaatttata atacggaaga gaaaaaagca accgttgaga accaccctga aatcgttgca
     5581 ttattaaaag aaacccatga agcaacccgt caatttgtgt ctcaacctat cggtaaagca
     5641 actgataata tgtatagtta ccttgcgtta gttcaagatg accctaccat tcaaattgtg
     5701 aaccaagctc aaaaagcgta tgtagaaaat gtggtaaaag gcttgccgga gcttgcagga
     5761 ttaccaattc taagtgccgg agcaccgttt aaagccggtg gacgtaaaaa tgacccgaca
     5821 ggctataccg aagtcgataa aggcgaatta actttccgca atgcggcaga cttatacctt
     5881 tacccaaata ccttagtggt ggttaaagca acaggagcag aattaaaaga gtggttagag
     5941 tgcagtgcag gaatgttcaa acaaattgat gtcgcttcgg ataaaccgca atatttactg
     6001 gattggacag gtttccgcac ctataactac gatgtaattg acggtgtcag ctatcaattt
     6061 gatataaccc aaccggctcg ttatgacggc gagtgcaaat tgatcaaccc taattcgcac
     6121 cgtgtggtga acttaacctt tgacggcaaa ccggttgatc ctaaacaaga attcttaatt
     6181 gccaccaaca attaccgtgc ttatggagca aaattcccgg gaacaggcga taaacatatt
     6241 gtgttcgccg caccggacga aaaccgccaa gtgttagcga attatattac caccgaaagt
     6301 aaagctcacg ggcaggtaag tccgaaagcg gataacaact ggcgtattgc accaattagc
     6361 tcaaatgcaa aattggatat tcgttttgaa acctctccaa cagataaagc taaagctttc
     6421 attaaggaaa atgcacaata tccgatggag tatatcgaaa acgatgaaac cggcttcgca
     6481 gtttaccgta ttgatttaac caaataatca gagctaaata caagcggtct aatttgcaaa
     6541 aaaattaaca aatttgaccg cttgtttcat tccatttttc taaaattgtt gtgctatatt
     6601 ttgccgaatt tcatcaaaat tggtcgattt gaccaactta ccattttcaa aaaccacctc
     6661 taaaagatca tctgaaaaat catccagtgc ggttagctcg tcaacataat gatcataaga
     6721 gattactttt actcgccctt tttgcgattt ttttaagccg ttatcggttt taggagcttt
     6781 gaaaattgcc ttttcgacac cgttaattgt aattgaagtc gctttgattg caaaacccag
     6841 cgtatcacga gtattgcgtt gataagtttg agccccaacg ccaaacacaa tattgctgga
     6901 agcaaaacct tttgccgtta agccctctaa aatccgtatc attttatcat aagtgacgcc
     6961 gtcaccataa attgccccaa tatgcggatt aagcacttta taaccttttt ggttaatact
     7021 accaccaaaa atatcccaca aacactcaat cagacctttg cgttcgtgtt caacggggga
     7081 ggaattgtta ccgcaaataa ttgtaaaaaa atcaccgcta tcagggcgga taaccaattt
     7141 tgctgattcc ggtcgagcta aaatttcttg ttttaataat ggcaaattaa cggtgatgtt
     7201 atgccagaaa tcggttgtat ctgccacaat agatagcata ttatttggat attttgccat
     7261 taaataacgg aaagtcggca gctcatcaac accgtgtgaa ctcatcaccg aatgttctga
     7321 tgccggaata gatgtaccga ttaaatgttg agaaccataa taggctgtca cgaatgaaat
     7381 tgcaggaatg gtatctgtgc ctaaaaatga ggttagatgt ccggcaccgg agctttctgc
     7441 tgattctaag gaactcattc cacgcataga gaaatcgtgt gcctggaagg gtagatggct
     7501 attatcatca caggtttgct ctgaaaattc ggctagagcc ttacgataag caaatgcaat
     7561 ggaagctgat gtaataggct gccataatga cacattaatc agggtttcca aataattagt
     7621 cagccaaaaa aagcttgagt gagtgttttc aattgtcatt aaaggaactt tcactgcaac
     7681 agattttcct tctggaatag ctttaattct gataggtaag taaccgagct gatgcaattg
     7741 tgcaatatgt tcgccagagt cctcaatatt caatgtgtca gaaataaatt gagtatattc
     7801 agaaacaacg tcatgttgtg agcgagaaaa aaaattatcg ttaaaataat gaatcaagta
     7861 ttttaaaata aatgcctgaa agccaaatga tacaacacgt gtaacaaatg gagcataaat
     7921 attactacga ggtgtgaatg tactatataa aaactgagaa ccttcaggat attgaattcg
     7981 atgtgaagtt ttataaaaat cacataatag tgatggtatt gcagttgaat taattttttt
     8041 acccaaaata ctatccattt tcttaaagtc cttatttaac ttttaaggct aaagg
//
LOCUS       DANLXO010000113         8083 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.113, whole genome shotgun sequence.
ACCESSION   DANLXO010000113 DANLXO010000000
VERSION     DANLXO010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8083
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.113"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(98..3631)
                     /gene="mfd"
                     /locus_tag="PXD69_002266"
     CDS             complement(98..3631)
                     /gene="mfd"
                     /locus_tag="PXD69_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDL6284418.1"
                     /translation="MSLISLNLPKSDGNFQDHQTLGNLVGHSDTLAISQAARAFYGLT
                     VVVTPDTRTALRLEKALPQFAGLPVQLFPDWETLPYDNFSPHQDIISARLSALFELQQ
                     GRQQILLLPINTLMQKVCPPNYLANNVLLIKKGDRFSIQKLRLQLENAGYRAVEQVLE
                     YGEYAVRGSILDLFPMGAEEPFRLDFFDDEIDSIRTFDVDNQRTKTEIAEINLLPAHE
                     FPTDSNGIEHFRAKFREKFGEIRREPEHIYQQVSKGILNAGIEYWQPLFFEEMASLFD
                     YFPAQTLFITFADIQQKAEQFHQDTQNRYESHRVDPMRPLLPPSDLWFAIDEVNRWLK
                     GYPRLTITSEKIRKSAAKMNANVANLPDIAIQSSAKEPFSAFQQFRQKFDGNILFSVE
                     SEGRRETLLDLLAPLGVKPKQVNSLDEAQGLPFSLIISPLDQGFVVETGGHGTRPYDD
                     ELNTNGENDNNYVGAGPVPARNLAIICETDLLGERVQTRREKNRKAVNPDTLIRNLAE
                     LKIGQAVVHLENGVGRYGGLTVLDAGGIKAEYLVLHYANDAKLYVPVASLHLISRYIG
                     GADETAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKRESQTGFAFAYDKAEFDQ
                     FSATFPYEETDDQKIAINAVISDMCQAKAMDRLVCGDVGFGKTEVAIRATFLAVMNHK
                     QVVILAPTTLLAQQHYENFKDRFANYPVNVEVLSRFKTAKEQKTILQNVAEGKVDILV
                     GTHKLLQDDVAFRDLGLLVIDEEHRFGVRQKEKIKQLRANVDILTLTATPIPRTLNMA
                     LNGMRDLSIIASPPARRLLIKTFVRQSDEMVIREAILREILRGGQVYYLHNDVATIEN
                     CAEKLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVPTANT
                     IIIERADKFGLAQLHQLRGRVGRSHHQAYAYMLTPHPKTLTKDAEQRLEAMSTIDNLG
                     AGFALATHDLEIRGAGELLGSEQSGQIESIGFSLYMDLLENAVKALQEGREPSLDEIT
                     QHQAEIELRVPALLPDDYLPDVNMRLSFYKRIASSENLQSLNDLKVELIDRFGLLPEA
                     TKNLFAITQLRLSAQTLGIKKIDAGIHGGYLEFKPTAQPDPMKFIALIQKQPAVYSFE
                     GAVKFKFRLALEDNRKRLEFVENLLREVVGG"
     gene            3792..5009
                     /locus_tag="PXD69_002267"
     CDS             3792..5009
                     /locus_tag="PXD69_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter"
                     /protein_id="HDL6284419.1"
                     /translation="MKNKILGSALMIAGTTIGAGMLAMPLTSAGMGFGATALLLVGLW
                     ALLAYTGLLFMEVYQTAPQKDVGVASLAEQYFGLIGRVLATFSLLVLLYALLAAYITG
                     GGSLLAGVMPEMADADMKLKISILIFTAVLGTFVVVGVKSVDGLTRVLFLGKIVAFIA
                     VLLMMLPKAKLENLTAIPLDNLLIISAIPIFFTAFGFHVIMGTINSYLDADIGKIRKS
                     IYIGTAIPLVAYLLWQLATHGVLSQNEFTTILTQDPTLNGLVKATSQITGSTILGEMV
                     RLFSVLALITSFLGVSMGIFEGVGDLLKRLNLPTNRLWLTIATFTPPILFALFYPNGF
                     IKALGYAGLLFAFYGMILPIGLAWKARRQYPNLPYRVIGGNLALVVALIAGIIIMVIP
                     FLIQAGYLPQAVG"
     gene            complement(5089..5595)
                     /gene="hutX"
                     /locus_tag="PXD69_002268"
     CDS             complement(5089..5595)
                     /gene="hutX"
                     /locus_tag="PXD69_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization cystosolic carrier protein
                     HutX"
                     /protein_id="HDL6284420.1"
                     /translation="MISIEQQTALRNELAENPGQILEMLAAKYQCTLEEVMLNLPAEM
                     LKVTEGERFAEVLQQIHEWDDAITLISHTEDTIIEFVGKLPSGSISRGFYNFEHKEGG
                     GLQGHLRYENCAKIYLLDRPFMGKRTVSLIFINKKGNAMFKIFVGREKIGGALKEHQI
                     KALYQLIG"
     gene            complement(5650..7728)
                     /locus_tag="PXD69_002269"
                     /pseudo
     CDS             complement(5650..7728)
                     /locus_tag="PXD69_002269"
                     /inference="COORDINATES: protein motif:HMM:TIGR01786.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
     gene            complement(7695..8078)
                     /locus_tag="PXD69_002270"
     CDS             complement(7695..8078)
                     /locus_tag="PXD69_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL6284421.1"
                     /translation="MVFTSYSIKSKKLCPTILALSVSSILSSQATYAEETTAELSEVN
                     VVAKEDVKASIEKKNKEIIQQELIQNNRDLVRYSPDVGIVNQGRHQKGFAIRGVEDNR
                     VGISIDGVSLFLIQKKIPFINAMVI"
BASE COUNT         2153 a         1838 c         1670 g         2422 t
ORIGIN      
        1 agcctagatg aaattactgg attcgcaata aacaaaaacg atttttacga tacagatcgc
       61 aaaaatcgtt tttcaagatt gacaacctta ggaggcttta tccgcccaca acctccctta
      121 gcaaattttc cacaaattct aaccgcttgc ggttgtcttc gagtgctaag cggaatttga
      181 acttcaccgc cccttcaaaa ctgtacaccg ctggttgttt ttggattaag gcgataaact
      241 tcattgggtc gggctgggct gtcggtttaa attcaagata accgccgtga atgccggcat
      301 cgattttctt aatcccgagc gtttgtgccg acaagcgaag ttgggttatc gcaaacaggt
      361 ttttggttgc ctctgggagc aagccgaagc gatcgatcag ctccactttc aagtcgttca
      421 ggctttgcag attttccgag cttgcgatcc gcttgtagaa cgacagacgc atattcacgt
      481 caggcagata atcgtccggc aataaggccg gtacacgcaa ttcaatctcc gcttggtgtt
      541 gggtgatttc atcgaggctc ggttctcgcc cttcttgcaa agctttgacc gcattttcga
      601 gcaagtccat atagagcgaa aaaccgatgc tttcaatctg tccgctctgc tccgaaccga
      661 gcaattcgcc tgcaccacga atttctaaat cgtgggtcgc caacgcaaaa ccggccccga
      721 gattatcaat ggtactcatc gcctccaagc gttgctcggc atctttggtg agcgttttcg
      781 ggtgcggtgt gagcatatag gcgtaggctt ggtggtgcga gcgtccgacc cgtccacgca
      841 gttggtgcag ttgtgccagc ccgaatttgt ccgcccgttc gataataatg gtattggcag
      901 tcggcacgtc aatccccgtt tcaataatgg tggagcaaac cagcaggtta aagcgttgat
      961 gatagaaatc gctcatcacc cgctccaatt cacgctcacg catctgcccg tgtccgatca
     1021 caattcttgc ctctggcacg agttcagcca atttctcggc acaattttca atggttgcca
     1081 catcgttatg gaggtagtaa acctgcccac cacgcagaat ttcacgcaaa attgcctcac
     1141 ggattaccat ttcatcactt tgtcgcacaa aggttttgat taaaagtcgg cgagccggcg
     1201 ggctggcgat aatcgagaga tcacgcattc cgttgagtgc catattcagc gttcttggaa
     1261 ttggcgtggc ggtgagggtc agaatatcca cattggcacg cagttgtttg attttctctt
     1321 tttggcgtac gccgaaacgg tgttcttcat caatcactaa aagcccaaga tcacggaacg
     1381 ctacatcgtc ttgcaacagt ttgtgcgtgc cgaccaaaat atccactttg ccctccgcca
     1441 cattttgcaa aatcgttttc tgctctttgg cggttttaaa gcgagacagc acttccacat
     1501 tcacagggta attggcgaaa cggtctttga aattctcata atgctgttgg gcgagcaagg
     1561 tagttggggc aagaataacc acctgtttat ggttcatcac tgccaagaaa gtcgctcgaa
     1621 tggccacttc ggttttgccg aagccgacat cgccacacac caatctatcc atcgctttgg
     1681 cttggcacat atcgctaatt acggcattga tggcaatttt ctgatcgtcc gtttcctcat
     1741 aagggaaagt ggcactaaac tgatcaaatt ccgctttatc gtaggcaaac gcaaaaccgg
     1801 tttggctttc tcgtttggca taaacatcaa gcaattctgc cgccacatca cggatttttt
     1861 ccgctgcttt ttggcgggtt ttcgcccacg cttcactgcc taatttatgt agcggcgcag
     1921 tttcatccgc cccaccgata taacggctga ttaaatggag cgaggcaacc ggcacataga
     1981 gtttggcatc gttagcataa tgtagcacga gatattcggc tttgatccca ccagcgtcca
     2041 gcacggttaa gccaccgtaa cgccccacgc cgttttccaa atgcaccacc gcctgtccga
     2101 ttttgagttc tgctaaatta cggattaagg tatcaggatt gacggctttg cggtttttct
     2161 cacgccgtgt ttgcacacgt tcgcccagca ggtcggtttc gcagatgatg gcaaggttgc
     2221 gggcgggcac aggacccgcc cctacgtagt tattatcatt ttcgccattt gtatttaatt
     2281 catcatcgta gggacgggtc ccgtgcccgc ccgtttccac cacaaaccct tgatcaagcg
     2341 gtgaaataat cagggaaaat ggcaaacctt gtgcttcatc taatgaattg acctgcttcg
     2401 gcttcacccc aagcggagca agcaaatcca gcaaggtttc tcttcgccct tcgctctcca
     2461 ccgaaaacag aatgttgccg tcaaattttt ggcggaattg ctggaaagca gaaaacggct
     2521 ctttggcaga ggattgaata gcaatatccg gcaagttagc cacatttgca ttcattttcg
     2581 ctgctgattt acggattttc tccgaagtta tcgttaaacg gggatagcct ttcagccagc
     2641 gatttacctc atcaatcgca aaccagagat cactcggcgg cagtagcggt cgcatcggat
     2701 ccactcggtg gctttcatag cggttttggg tatcttggtg aaattgttca gctttttgct
     2761 gaatatcggc gaaagtgata aacagcgttt gggcagggaa atagtcaaac agacttgcca
     2821 tttcctcaaa aaacaacggc tgccaatact caatccctgc atttaaaatg cctttgctga
     2881 cttgctgata aatatgctcc ggctcacggc ggatttcacc gaatttttca cggaatttgg
     2941 ctctaaaatg ctcgatcccg ttgctatcag tcgggaactc gtgtgccggc agtaaattaa
     3001 tttcggcaat ttccgttttg gtgcgttggt tatccacatc aaaagtgcgg atactgtcga
     3061 tctcatcatc gaaaaaatcg aggcgaaacg gctcttctgc tcccatcggg aataggtcta
     3121 aaatcgagcc acgcacggcg tattcaccat attccaacac ctgttccacc gcccgatagc
     3181 cggcattttc cagttgtaac cgcagttttt gaatcgaaaa acggtcgcct tttttaatca
     3241 acagcacatt gttagcgaga taattcggcg ggcagacctt ctgcattaag gtgttgatcg
     3301 gcaacagcaa aatctgctgt cgcccttgtt gcagttcaaa cagggcagaa agtcgggcgg
     3361 agataatgtc ttggtgcggc gaaaaattgt cataaggcaa ggtttcccaa tcggggaaca
     3421 gttgcactgg cagccctgca aactgaggca aggctttttc caagcgtaac gccgtgcggg
     3481 tgtcgggtgt gacaaccacc gtcaagccgt aaaaggctcg ggcagcttgg ctgatcgcaa
     3541 gggtatcgga atgcccgaca aggttaccga gggtttgatg atcttgaaaa ttgccgtcag
     3601 atttcggcag attaagtgaa attaaagaca tacaagcggt ctgttttaaa taaaaaattg
     3661 caaattgttg cttagtttac taaagcacgg ctgattgtgc aaaataagcg gagaaattat
     3721 gttatctaga tcgcattgcg aaaaaattct gataaaatgt tccccttttt taactcttac
     3781 tcacacatat tatgaaaaat aaaattttag gaagtgcatt aatgattgca ggcactacca
     3841 ttggtgcagg aatgcttgca atgccactca cctctgcagg aatgggtttt ggggcaaccg
     3901 cattactctt agtcggatta tgggctttat tggcctacac cggtttatta tttatggaag
     3961 tttatcaaac cgctccgcaa aaagatgttg gagtggcaag ccttgccgag caatactttg
     4021 gcttaatcgg gcgtgtatta gccactttca gtttgctcgt actactttat gccctacttg
     4081 cggcttatat taccggtggt ggttcactgt tagccggtgt aatgcctgaa atggcagatg
     4141 ctgatatgaa actgaaaatc agcattttaa tcttcactgc ggtattaggt acatttgtgg
     4201 tagtcggcgt gaaatcggtt gatggtttaa cccgagtact gtttttggga aaaattgttg
     4261 cttttattgc cgtgttgctg atgatgctgc ctaaagcgaa gctggaaaac ttgacagcaa
     4321 ttccattaga taacttactc attatttctg ctatacccat tttcttcact gcgttcggtt
     4381 tccacgttat tatgggaaca attaatagct atttagacgc agatatcggc aaaattcgta
     4441 aatctattta tatcgggacg gcaattccgc tagtggctta tttattgtgg cagctcgcta
     4501 cacacggggt attaagccaa aatgaattca ccacaatttt gacacaagat ccgaccttaa
     4561 acggcttggt gaaagccact agccagatta ccggtagtac gattttaggc gaaatggttc
     4621 gcttattctc agtgcttgca ttgattacct catttttagg ggtttcgatg ggaatttttg
     4681 aaggcgtggg cgatttgtta aaacgcttaa atctaccgac taaccgttta tggctgacca
     4741 tcgccacctt tacaccgcca attctgttcg ctttattcta tccgaacggc tttattaagg
     4801 cattaggtta cgccggttta ctctttgcgt tctatggtat gattttacct atcggcttag
     4861 cgtggaaagc acgtcgccaa tatccgaatt taccttaccg tgtgattggt ggtaatttgg
     4921 cattagtggt tgcgttaatt gccggtatta tcattatggt cattccgttt ttaattcagg
     4981 ctggctattt accgcaagcg gtaggctaat attgaaaagg gctacgattc aatatcgtag
     5041 ccctttctat aagttacaag cggtcatttt tcgatgactt tttacagatt agccaatcaa
     5101 ctgatacagc gccttaattt gatgctcttt taatgccccg ccaattttct ctctgccgac
     5161 aaaaatctta aacattgcgt tgcctttttt attaatgaaa atcagtgaaa cagtacgttt
     5221 tcccataaaa ggacgatcca acaaataaat tttggcacaa ttttcgtagc gtagatgccc
     5281 ttgtaagcct ccgccctctt tatgttcgaa attgtaaaat ccacgagaaa ttgaaccgct
     5341 tgggagcttt cccacaaact caataatggt atcttccgta tgcgaaatca gcgtaatcgc
     5401 atcgtcccat tcgtggattt gctgtagcac ttcggcaaaa cgttcccctt cggttacttt
     5461 tagcatttca gccggtaaat tcagcattac ctcttccagc gtgcattgat attttgccgc
     5521 taacatttct aaaatttgcc ccggattttc ggctaattca ttgcgtaagg cggtttgttg
     5581 ttcgattgat atcattaaat gttcctttaa gtaaagagag tttcttagct ctctaagtaa
     5641 atttgtaaat tagaaacggt attcaaaatt agccgagaag ttacgtccag gttcataata
     5701 gcgttgtaat ccaggatagc caccgtaagt tgcattttca cgtactccaa cagaattaac
     5761 gattccacct gttgtattta aaccacgtaa agtatcccaa gtatggtatt tacggttaaa
     5821 caaattataa ataccggcac gtaatgtaat attctcagtt ggtttataga aaccgtataa
     5881 atccacaaca aaggctttag catttaagtg cttccaggta tctaaacctg tctcgtgaga
     5941 atattcagta caacgaatgt catattcatc cccccaataa gggtaatacg gatttggcgt
     6001 tctatcctct ttaaggcatt tttccggtaa tgtttttaaa tattttgcat ctttcgcctt
     6061 tttagccccc aagaatgtga agcgagaaaa tactccccat ttaccttcag gttgttcata
     6121 atctaagcca actacggctt taatcggctg aatagaaagt aaatctgccc cgttagacat
     6181 actacctttg ctgtaaccga aggctccaaa tagcttccag ccttcaggta ttggcatagc
     6241 tgaatttaaa ttccatttac cactcacttc tagcccgtag attttcgcag aatcaatatt
     6301 ttgcatttgc tgtaccgggc gccaaaactc tctaccatat gcttggtaaa catcccaggt
     6361 ttcttgctcc cataaaaaat ctttatattt agtatggtgg aaattaactg agagcagccc
     6421 aacattgcca ctaccttgca aacttaaatt ttggcttaaa ctacgttccg cttttaggtt
     6481 tggattggac atccaagctc ctgcagcatt atcacggtaa tcaaaataca tttctgatgc
     6541 atttggaata cggaagcctg tcccaatgtt atatcctact ttccatgcct cagtcagatg
     6601 tttttctaaa ccggtaaccc aagttagttg attaaatttc gcattgtcag tttttacgca
     6661 gttacgacaa acaagaccat tgagttcttg ttgttcatac ttcgcccaat cataacgaat
     6721 gcctagcgtt gcaatccaat catgcgttaa atcaatctta tcgtgcaatg aaaaagtgtg
     6781 ctgtttcgtt ttaattgggt acatcatcgt agaatcggga gaatttaccc aaacaccgga
     6841 taaataaacc gagtccttat gtaatacatc gaaatctctc tctgcagtag aggctttgaa
     6901 agatagctga tgagtccatt taccaaattc taatgcttgg ctgtctaaac ggaaatttaa
     6961 gcgtttcaat tcagtattaa aaatacgaat attattgtca cttggttttc tttgtttagc
     7021 agggctccag tctgttgcat cttcagcgcg tgtaccttca tagttataag cagatgtttc
     7081 agtatcttga taatctgcat ctatcttcgc tagagatatc cattttgact ctgggaaata
     7141 ctcataaaaa acatttactg tatcacgttt actacggtct tccgcttcac gccaaaaaga
     7201 agtaatagta acggctgaat cttcgataat ataattttta ttattttgcc cactgtaaga
     7261 aacaccaacg cggtgattat cattaaatcg ataagcaaat ttggctaaat aattatgatg
     7321 attatgagta gaatcatcag gagtttgttt actactgcgt aaagagcgag tttgtagaga
     7381 atcttcagga agtgtataac ctcctgcact tttcatttca tgcccatggc gatttgaata
     7441 aaccaatatc gcctcagctt tctcacctaa atatccaaca ccgaatgtat tcaaccattc
     7501 attattacga gtaccatatc ctgtgcgata aaaagcacca aatttattac cgttacgaac
     7561 aatatcataa ggctcaagcg tccgataatt aactccgccg cctaaattac cactaccttg
     7621 attgaaagaa tctgcacctt tagatacttc aatagtacga gctaattccg gatctataga
     7681 ttggcgagat gtatttaaat taccatagcg tttataaagg gaattttctt ctgaatcagg
     7741 aaaagcgaga caccatcaat acttattcct acacggttgt cttccactcc acgaatagca
     7801 aatccttttt gatgtctacc ttggttaaca atgccaacat cagggctata acgaactaaa
     7861 tctcgattat tttgaatcaa ctcttgctga attatctctt tatttttctt ttctatagaa
     7921 gccttcacat cttctttagc aacaacattt acttcagata attccgctgt tgtttcttcc
     7981 gcataggtag cttgtgaaga caaaatgcta ctaacgctta aagccaatat agtcgggcac
     8041 aattttttag actttattga ataagaggta aacaccatga ttc
//
LOCUS       DANLXO010000114         7789 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.114, whole genome shotgun sequence.
ACCESSION   DANLXO010000114 DANLXO010000000
VERSION     DANLXO010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7789
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.114"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..359)
                     /locus_tag="PXD69_002271"
     CDS             complement(<1..359)
                     /locus_tag="PXD69_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284422.1"
                     /translation="MSTTLNEINITELDAGPEIKSLSLNDAVNSFLNDSACPICGKNC
                     QYWQRLKRSLNRKENQGKGDKVLVKNPSPISIEKNLINAYKEYRKFEEDLKDKIHSQE
                     SIYDLKLAKELFHSYTN"
     gene            complement(393..1679)
                     /gene="purD"
                     /locus_tag="PXD69_002272"
     CDS             complement(393..1679)
                     /gene="purD"
                     /locus_tag="PXD69_002272"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDL6284423.1"
                     /translation="MNILIIGNGGREHALAWKVRQSPLADKVFVAPGNAGTAMENGIE
                     NVAISATDVPALVTFAKQNSVGLTIVGPEAPLVVGVVDAFRAHGLTIFGPTQAAAQLE
                     GSKAFTKDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPIVIKADGLAAGKGVIVAMT
                     LQEAEDAVRDMLSGNAFGEAGSRVVIEEFLDGEEASFIVMVDGKNVEPMATSQDHKRV
                     GEGDSGLNTGGMGAYSPAPVVTKAIHQRVMDEIIYPTVQGMASENTPYTGFLYAGLMI
                     MPNGQPKVIEFNCRFGDPETQPIMMRLESDLVELCLKACEGKLDSVQSKWCEQAALGI
                     VLAAAGYPGDYRKGDEIIGIPTSTSNQKVFLAGVEQKEGKLLTNGGRVLCATALGNSV
                     FEAQQQALQLAEQIQWQGKFYRRDIGYRAVARKQAK"
     gene            1913..2287
                     /gene="rpsF"
                     /locus_tag="PXD69_002273"
     CDS             1913..2287
                     /gene="rpsF"
                     /locus_tag="PXD69_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDL6284424.1"
                     /translation="MRHYEIVFMVHPDQSEQVPAMIERYTASVKEAGGQVHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPM
                     VKAKESKVAEAVAEVESEEAGE"
     gene            2262..2636
                     /gene="priB"
                     /locus_tag="PXD69_002274"
     CDS             2262..2636
                     /gene="priB"
                     /locus_tag="PXD69_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HDL6284425.1"
                     /translation="MNQRKQASNLPIDNCLILSGTVSSLVKQSLNPLGVPHYSFWLEH
                     RSIQTEVNLERQAWCKIQVVLAGNQFSYLTQQIKLGESVRIKGFIHTHKDFNGLNQLV
                     LHTEQIEFIDQEKPNGTLFPSS"
     gene            2611..2838
                     /gene="rpsR"
                     /locus_tag="PXD69_002275"
     CDS             2611..2838
                     /gene="rpsR"
                     /locus_tag="PXD69_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDL6284426.1"
                     /translation="MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLALLPYTDNHQ"
     gene            2854..3303
                     /gene="rplI"
                     /locus_tag="PXD69_002276"
     CDS             2854..3303
                     /gene="rplI"
                     /locus_tag="PXD69_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDL6284427.1"
                     /translation="MQVILLDKVAHLGSVGDQVTVKSGFARNFLIPQGKAVMATAANI
                     AHFEARRAELEAKAAAALATAQERAAKIAALAAVSVSATAGDDGRLFGSVSAKDIAEA
                     LTAAGVGVAKSEVRLGEGPLRTTGEHQVKIHLHPEVNATVAVNVVAE"
     gene            complement(3367..4143)
                     /gene="dnaQ"
                     /locus_tag="PXD69_002277"
     CDS             complement(3367..4143)
                     /gene="dnaQ"
                     /locus_tag="PXD69_002277"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDL6284428.1"
                     /translation="MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRR
                     LTGRTYHVYIKPPREVDEEAIAVHGITNEFLQDKPVFAEIAEEFLDFIKGAELIIHNA
                     PFDVAFMDQEFSYLPNPPAKTAEMCTVTDSLQMARRMYPGKRNNLDALCDRLGIDNSK
                     RVLHGALLDAEILADVFLMMTGGQISLLGEEETEVVSEVIDIEEEFSAIVLNADEAII
                     LKANDEEEESHLALLKLIEKKSKGNCLWTKALTDTAEISH"
     gene            complement(4231..5901)
                     /gene="ettA"
                     /locus_tag="PXD69_002278"
     CDS             complement(4231..5901)
                     /gene="ettA"
                     /locus_tag="PXD69_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HDL6284429.1"
                     /translation="MSTQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGA
                     GKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPKLAPQQTVREAVEEAVAEVKNAL
                     TQLDEVYAMYADENADFDKLAAKQAELEAIIQAHDGHNLQNQLERAADALRLPDWDAK
                     IEHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITH
                     DRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKEKRLAQEQAAESARQKSIEKELEW
                     VRQNPKGRQAKSKARMARFEELNSGEYQKRNETNELFIPPGPRLGDKVIEVQNLTKSY
                     GDRTLIDDLSFAIPKGAIVGIIGANGAGKSTLFRMLSGKEQPDSGSIVLGETVVMASV
                     DQFRDAMDDKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGE
                     RGRLHLAKLLQRGGNVLLLDEPTNDLDVETLRALENAILEFPGCAMVISHDRWFLDRI
                     ATHILDYGDEGKVTFYEGNFSDYEEWKKKTFGEAATQPHRVKYKRIAK"
     gene            6107..6586
                     /locus_tag="PXD69_002279"
     CDS             6107..6586
                     /locus_tag="PXD69_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284430.1"
                     /translation="MYVQKHSNYSTALLVVIREKINSLPHQGLILDLISISKDDLDDI
                     LEGNTDMNIHQLLSLIYKAGFFDVLNITNNLCIKLSQFGFYFQNGNLSQKDDELLSLY
                     REFYKHNEFITHLKSHSLYGCIEQPTSAFFHYCTNENFRNAFNEESLYDFQMWNVFR"
     gene            6596..7765
                     /locus_tag="PXD69_002280"
     CDS             6596..7765
                     /locus_tag="PXD69_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284431.1"
                     /translation="MSSQNSFLTKYSKSNSHSQDSQKINESLEWLNEKNYGELYSSFL
                     IAVGVKEFLDKGFIPNDNYRDIIALLPVALYVFHLRSLKHIKNLESNSYLDEEGRDTV
                     NKYKAFFSIFEAEIRDATCICDNKIVTINGEVCCDIKEVARKIVIEFLNEVDIGNKVK
                     FYYPDERHELFVELLIVLATLRIYRNRNIFFFEKGFFNFFPEFITILGTGAFNGFLDF
                     PSLVGKVFPEIIDTINEGLDLDIAIENFEVLSQEEMTECMGLYEQALIKKAEEGEIGL
                     LNVDEINSFYEDNSELILLAKQPMVEEIIPKPDSKASSAILKFFDSNSNILIAKLKES
                     GLQLSAVALQNDQNIARVANVVYNLLPGMVRIFVSYDTVENFLLNNRQWLINKLV"
BASE COUNT         2189 a         1608 c         1594 g         2398 t
ORIGIN      
        1 aaatttgtat aagaatgaaa taattcttta gctagtttta gatcatatat actttcttga
       61 gagtggattt tgtcctttaa atcctcttca aattttctgt attctttata agcgttaatt
      121 aaatttttct caatagaaat tggagatgga ttcttcacaa gaactttatc tcccttacct
      181 tgattttctt ttctatttaa agatcttttt agtctttgcc aatattgaca gttttttcca
      241 catatagggc acgcagagtc atttagaaaa gagtttactg catcgtttaa tgatagtgat
      301 ttaatttcgg ggcctgcatc gagttcagtg atattaattt cattaagtgt tgtactcata
      361 ataaattttt ccttgtttta agagtttata aattatttcg cttgttttct tgccactgct
      421 cggtagccaa tatctcggcg atagaatttg ccttgccatt gaatttgttc ggcaagttgt
      481 aaggcttgtt gttgagcttc aaatacactg ttgccaagtg cggtggcaca aagtacacgt
      541 ccaccgttgg tgagcagttt tccttctttt tgctcaaccc ctgctaagaa aactttttga
      601 ttggaggtag aggtcggaat gcctatgatt tcatcgcctt tacggtaatc gcccgggtag
      661 cctgcggcag ctaaaacaat gcctaatgcg gcttgttcac accattttga ttgcacgcta
      721 tccaatttgc cttcgcacgc ttttaagcac aattcaacga ggtctgattc caaacgcatc
      781 ataatcggct gagtttcagg gtctccaaaa cggcagttaa attcaatcac tttcggctga
      841 ccgtttggca taatcattaa gccggcatag agaaaaccgg tgtaaggggt attttcgctt
      901 gccattcctt gcacggtcgg gtaaataatt tcgtccatta cacgttggtg gattgccttt
      961 gttaccaccg gagcagggga gtaagccccc attccgccgg tatttaagcc gctatcgccc
     1021 tcgccaacac gtttgtggtc ttgtgaggtt gccattggtt cgacattttt gccgtccacc
     1081 atcacaataa aactggcctc ttctccgtct aaaaattcct cgatcaccac acggctgccg
     1141 gcttcaccaa aggcgttgcc tgacagcata tcacgcactg catcttccgc ctcttgtaaa
     1201 gtcattgcaa caattacgcc tttgcctgcg gctaaaccgt ctgctttgat tacaatcggt
     1261 gcaccttttt gttttaagta ggcaagtgcc ggttcaattt cggtgaaatt ttggtattct
     1321 gcggttggaa tctgatggcg agccaagaaa tctttggtaa atgctttaga accttctaat
     1381 tgagcagcgg cttgggtcgg gccgaaaatg gttaaaccgt gggctcgaaa agcatcaacc
     1441 acgccaacta ctaacggtgc ttcagggccg acaatcgtca aacctacgct attttgttta
     1501 gcgaatgtaa ctaaggcagg cacgtcagtg gcggaaatag ctacattttc aatgccgttt
     1561 tccatcgctg tgccggcatt gccgggggcg acaaagactt tgtctgcgag cggcgattga
     1621 cgaactttcc aagcaagagc gtgttcacgc ccaccgttgc cgataattaa aatattcatt
     1681 gggattcctt gcaaaaatga taaagcaaac gtttgcgtat tgtacttgat ttgtttatct
     1741 gctgacaagc agtcgttttt ctcggatttt ttgcaaaata cgaaattgtt gcttgcaaaa
     1801 taggcttttt tcagtataat cctgccgttc agtcacattc gttttttaat ccttgcttcc
     1861 acaagttggt gactggctaa agttggaggc tgctaacccg taaggatagt caatgcgtca
     1921 ctacgaaatc gtttttatgg ttcacccgga ccaaagcgaa caagtaccag caatgattga
     1981 gcgctacaca gcgtctgtaa aagaagctgg cggtcaagtt catcgcttag aagattgggg
     2041 tcgtcgtcaa ttagcatacc caatcaacaa acttcacaaa gcacactatg tgttaatgaa
     2101 tgtagaagca cctcaaagtg taatcgacga gttagaaact aacttccgtt ataacgatgc
     2161 agttcttcgt aacttaatcg ttcacactaa agcggcagta actgaagcgt caccaatggt
     2221 gaaagcgaaa gaaagcaaag ttgctgaagc ggtagctgaa gttgaatcag aggaagcagg
     2281 cgagtaattt gccgattgat aattgtttaa tcttaagcgg aacggtttcc agcttggtta
     2341 aacaaagcct aaaccccctt ggtgtgcctc attacagttt ttggttagaa catcgttcaa
     2401 tccaaaccga agtgaattta gaacgccaag cgtggtgcaa aatccaagtg gttttggcag
     2461 gcaatcaatt tagttattta acccaacaaa ttaagctcgg tgagagcgtg agaattaaag
     2521 gttttatcca tactcacaaa gactttaacg gtttaaatca gttagtctta cacaccgaac
     2581 aaattgaatt tatagatcag gagaagccaa atggcacgtt atttccgtcg tcgtaagttc
     2641 tgccgtttca cagcggaaaa tgttgttgaa atcgattaca aagatatcgc tacattaaag
     2701 aactacattt ctgaaagcgg caagattgtt cctagccgta ttactggtac tcgtgcgaag
     2761 tatcaacgtc aattagctcg tgcaattaaa cgcgctcgct accttgcgtt acttccatat
     2821 actgataacc accaataatc aggagagagt acaatgcaag ttattttatt agacaaagtt
     2881 gctcacttag gttctgtggg cgaccaagta accgttaaat ctggttttgc tcgtaacttc
     2941 ttaatcccac aaggtaaagc ggttatggca actgcggcaa acattgctca ctttgaagca
     3001 cgtcgtgcag aattagaagc aaaagctgca gcagcattag caactgcaca agaacgtgca
     3061 gcgaaaattg cagcattagc agcagtatca gtatctgcaa ctgcaggtga tgatggtcgt
     3121 ttattcggtt ctgtatcagc taaagacatc gctgaagcat taactgcagc aggtgttgga
     3181 gttgctaaat ctgaagttcg tttaggtgaa ggtccacttc gtacaaccgg cgaacaccaa
     3241 gttaaaattc acttacaccc tgaagtgaat gcaactgtag cagtaaacgt tgttgctgaa
     3301 taatcagtag aaatagaaaa cccagcgaaa gctgggtttt ttgtttgctt tatttattgg
     3361 ttagaatcag tgagatattt ctgctgtgtc ggttaatgct tttgtccata ggcaatttcc
     3421 tttggatttt ttctcaatca gtttcagaag tgctaaatgc gactcttcct cttcatcgtt
     3481 tgctttaaga ataattgcct catcggcatt taacacaatt gcagaaaatt cttcttcaat
     3541 atcaataact tcacttacca cttcagtttc ttcttcgcct aataatgaaa tctgaccgcc
     3601 ggtcatcatt aggaatacat cagctaagat ctccgcatcc agtaacgccc cgtgtagtac
     3661 acgcttgcta ttatcaatgc cgagcctgtc gcaaagtgca tctaaattat tccgtttgcc
     3721 ggggtacatt cttcgtgcca tttgcaggct atcggttacg gtacacattt ctgcggtttt
     3781 tgccggtgga ttaggcagat aagaaaattc ttgatccata aacgccacat cgaagggggc
     3841 attgtgaata attaattccg cacctttgat gaaatccaaa aactcctcgg caatttcagc
     3901 aaaaacaggt ttatcttgca aaaattcatt ggtgatgccg tgaactgcaa tcgcctcttc
     3961 atctacctca cgcggtggct tgatataaac gtgataagtt ctgccggtta aacggcggtt
     4021 aatgacttca accgcaccga tctcaataat attatgccca atctgtggcg ggccacctgc
     4081 catattcatt cctgtggttt cagtatccag cactacttgg cggataattt tttcttctgt
     4141 catattcaat ttaaaattgt aggggtgaaa tatttttatc ccttaattct gcatttgatt
     4201 aggggcgaaa catatttcgc ccctacattg ttacttcgca atccgtttat atttcactcg
     4261 gtgcggttgg gtggcggctt caccgaaggt tttcttcttc cactcttcat agtcggagaa
     4321 gttaccctcg tagaacgtca ctttgccttc atcgccgtag tctaaaatat gggtggcgat
     4381 acggtctaag aaccagcggt cgtgcgaaat taccattgca cagcccggga actctaagat
     4441 cgcattttcc aacgcacgca gggtttctac gtctaagtcg ttggtcggct cgtccagtaa
     4501 caacacgtta ccgccacgtt gtagtagctt cgccaagtgt aaacgaccac gttcaccgcc
     4561 tgaaagctcg cccacacgtt tttgctgatc tacgcctttg aagttgaaac gccccacata
     4621 agcacggctt gggatttcaa agttaccaat cgtgagaata tcctgcccgt tcgacacctc
     4681 ttcccacacg gttttcttat cgtccatcgc atcacggaac tgatcgaccg atgccattac
     4741 caccgtttca ccaagcacga ttgaaccaga atccggctgt tctttaccag aaagcatacg
     4801 gaacaaggtt gatttacccg caccatttgc cccgataatc ccgacaatcg cccccttcgg
     4861 aatagcgaac gacaagtcgt caatcaaagt gcgatcgccg taagatttag tcaggttttg
     4921 tacctcgatc actttatcac ctaagcgtgg acccggtgga ataaagagtt cgttagtctc
     4981 gttacgtttt tgatattcgc ctgagttaag ctcttcaaag cgtgccatac gagccttact
     5041 tttcgcttgg cgaccttttg gattttggcg tacccattcc aactctttct caatcgattt
     5101 ttgacgagcc gattccgccg cttgctcttg tgccaagcgt ttttctttct gctccaacca
     5161 agaagagtag ttaccttccc aaggaatgcc ttcaccacgg tcaagctcta agatccagcc
     5221 cgcaacgttg tctaagaagt aacggtcgtg ggtaattgcc actacggtgc cttcgtagtc
     5281 gtggaggaaa cgctccaacc acgccaccga ttccgcatct aagtggttgg tcggctcatc
     5341 taacaataac atatccggtt tttccagcaa cagacggcaa agtgccacac ggcggcgttc
     5401 accccctgat aaatgctcga tttttgcgtc ccaatccggc agacgtaacg catcggcagc
     5461 acgctctaac tggttttgaa ggttatggcc atcgtgggct tgaataatcg cctctaattc
     5521 cgcctgtttt gccgctaatt tgtcgaaatc ggcattctca tcagcataca tcgcatagac
     5581 ttcatcaagc tgggttaagg cgtttttcac ttccgcaacc gcttcttcca ccgcttcacg
     5641 cacggtttgc tgtggggcaa gtttcggttc ttgtggaaga tagccgattt taattcccgg
     5701 ttgtggacga gcctcgccct cgaactcttt atctacgccc gccataatgc gtaaaagcgt
     5761 tgatttaccc gccccgttta agccgagcac cccgattttc gcccccggga aaaagctcag
     5821 ggaaatatct ttaagaatgt gacgcttcgg cggcacgact ttgccgacac ggtgcatcgt
     5881 atatacaaat tgagttgaca ttggttgtat tcctcacaaa aaaattcgcc ttattttact
     5941 tgaatttaca gccaaaatat agggtggttt tggcttttgg taaagtaacc ttttccaata
     6001 gagatgttat ttgaggctgc atagtactat gcatttctct taccttgaca ggtaagagaa
     6061 acaaatcctg aaggaaaaaa attttaagga agttattcta tgcaatatgt atgtccaaaa
     6121 acactcaaat tattcaacag cattgttggt tgttataagg gagaagatta attctctacc
     6181 tcatcaaggc ttgattttag atttaatatc catttctaaa gatgatttag atgatatttt
     6241 ggagggtaat actgatatga atattcatca attattaagc ctgatttata aggctggatt
     6301 ttttgatgta ttaaacatca caaataatct atgtataaaa ctcagtcaat ttggttttta
     6361 tttccaaaat ggcaatttga gccaaaaaga tgatgagctt ttgagtttat atagagaatt
     6421 ctataaacat aacgagttta tcactcatct caagtcccat agtctttatg gatgtattga
     6481 gcaacctact tcggcatttt ttcattattg tactaatgaa aactttagaa atgcgtttaa
     6541 tgaagagagc ctctatgatt ttcaaatgtg gaatgtgttt agataggagt tttttatgtc
     6601 atctcaaaat agtttcttaa caaaatattc aaaaagtaat tctcatagtc aggattctca
     6661 aaaaataaat gagtcattag aatggctgaa tgaaaaaaat tatggtgaat tatatagttc
     6721 ctttctgatt gcagtgggag tgaaagagtt tttagataaa ggatttatac ctaatgataa
     6781 ttatagagat attattgctc tactcccagt agcgttatat gtctttcact taagatcttt
     6841 gaaacatatc aaaaatctag aatctaacag ttatttagat gaagaaggaa gagatacggt
     6901 aaataaatac aaggcatttt tctctatttt tgaagcagag attcgagatg caacatgtat
     6961 ttgtgacaat aaaattgtaa caattaatgg tgaggtgtgc tgtgatatta aggaggtagc
     7021 aaggaaaatt gttatagaat ttctaaatga agtggatatt ggtaataaag ttaagtttta
     7081 ttacccagat gaaagacatg agctttttgt agagctgctc attgttctag caacattaag
     7141 aatatatcgt aatagaaata tattcttctt tgaaaagggg ttttttaact tttttcccga
     7201 atttatcact attctcggga ctggtgcgtt taatggattt ttagacttcc ctagtttggt
     7261 aggaaaggtt tttccagaaa ttattgatac gataaatgag ggtttagatt tagatattgc
     7321 gattgagaac tttgaagtgt tgagtcagga agaaatgact gaatgtatgg gtttatatga
     7381 gcaggctctc attaagaaag ctgaagaagg cgaaattggt ttattaaatg ttgatgaaat
     7441 aaatagcttt tatgaagata atagtgagct aatcttactt gctaaacaac ctatggttga
     7501 agagataatc cctaaaccag atagcaaagc ctcctctgca attctaaaat tctttgattc
     7561 aaactcaaat atcttaattg ctaaattaaa agaaagtggt ttgcaattaa gtgctgtggc
     7621 attacaaaac gaccaaaata tcgcacgagt agcaaatgtc gtttataact tattgccggg
     7681 catggtaaga attttcgtaa gttacgatac cgtagaaaat ttcttattaa ataaccgcca
     7741 atggttgatt aataaattag tttaatttgg aggggaagaa ctatggata
//
LOCUS       DANLXO010000115         7606 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.116, whole genome shotgun sequence.
ACCESSION   DANLXO010000115 DANLXO010000000
VERSION     DANLXO010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7606
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.116"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            150..2297
                     /locus_tag="PXD69_002281"
     CDS             150..2297
                     /locus_tag="PXD69_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL6284432.1"
                     /translation="MKRLRYSYLALILGSALPLSAYADGYLSNDNIRQFDARFNFFLA
                     NPLPAPIAKADGRGEAIENLVVKYASDYLNDIYLKEDVIRFRRWQWQDLYTSLDLKTK
                     QKPDYLNTYRLQAEAYFINKQYQEALSQLDQILRRNPNDVHAMAMSVVASRVLENPNT
                     EAERLLALYQISPSIAQKVQQYLHFTDTMLAASYGSEPQTTMIPDTIAVFGQSPNPDG
                     TPSKGLLQRLEKTKEMAEKFPNAKIILSGGPVRYIYAEADVMKKWLIENGVDESRLLL
                     DDVARDTPGNAVGIIDFMKEYGGRKVLGIGTILHLPRAMSVLKSYADSIGYELEIDSA
                     GGGSPPNEKNKKGEALYTFVNVARAMGLFTLGDFENLLAKEQAEKEQREALEKAQQNY
                     LEKLVAERDQAVKNAENSANELEVARQALETAKQAHQQAEEELNKELSKTQEQLKQST
                     EALSRLIIKQNNPFSEHYVVQLNLMEQATYDLYRRLAEIEHTQDWNLWLSDSLSKYRL
                     KNRSTEDYHLLHIGLDHQVSHNWSIGGVFGISQGQIENRTHKVKGTSAGIYAGYRPTS
                     GLFWTNFFNYSHFTNQSGVTKRDNNAYSLSSEIGRNIVMSHQWQITPKLQLGWAKAGS
                     ARMFWAGTGLRLGKVIELNAIKLKPYADISYRFRNRHIDTLDSLSDRHRNVISIGIQA
                     VGNRHYFAIEGSMLHGDALKRSYGLHANYHYQW"
     gene            2310..3428
                     /locus_tag="PXD69_002282"
     CDS             2310..3428
                     /locus_tag="PXD69_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL6284433.1"
                     /translation="MKKIKTTLSALALSLSLISVNSWAIPADYLSQDNISQYDKAFNF
                     VLAKVLPAPKGKEDGRGAPIEHLVIQYAPDYVDDPYLKEDVLNFRRWYWQAMYASLDQ
                     KVKEKPTYLNTYRLQAEAYFVNKEYREALSQLDQILRQNPRDIHALAMTVLASRVLED
                     TEQETARLSALKQLAPEVAQRMTDFFAFTEQTLAASYGNEPQTAMIPDTIAVFGSTPN
                     KDGTPSPLLLDRLQKTKEMAQKFPQAKIIVSGGAVKTEFAEADVMAKWLSENGIEKDR
                     LLLDPVARDTPGNAVGIIKLMQTYNGKKVLGIGTLQHIPRATAVLKGYAQHIGYPIEM
                     DSVGGGKPATPGKAKIEALYTYVNVARSMGLFELGDFK"
     gene            complement(3489..4751)
                     /gene="rho"
                     /locus_tag="PXD69_002283"
     CDS             complement(3489..4751)
                     /gene="rho"
                     /locus_tag="PXD69_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDL6284434.1"
                     /translation="MHLTQLKNTPVSKLVEMGENQMGLENLARLRKQDIVFAILKQHA
                     KSGEDIFGQGVLEILPDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKI
                     RPPKEGERYFALLKVDSVNDDKPEASRSKILFENLTPLHANSRLKMERGNGSKEDLTA
                     RILDLAAPIGKGQRALIVAPPKAGKTVLLQNIAQSITHNHPECELIVLLIDERPEEVT
                     EMQRTVRGEVIASTFDEPATRHVQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYN
                     TVTPVSGKILSGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIFE
                     EFKGTGNMELHLSRRIAERRIFPAIDFNRSGTRKDDLLMAADELQKTWMLRKVLNPMD
                     EVDAIEWLIDKLMMAKTNEEFFEIMKRS"
     gene            complement(4937..5884)
                     /gene="cysK"
                     /locus_tag="PXD69_002284"
     CDS             complement(4937..5884)
                     /gene="cysK"
                     /locus_tag="PXD69_002284"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDL6284435.1"
                     /translation="MTIYADNSYSIGNTPLVRLKNFGNGNIVVKVEGRNPSFSVKCRI
                     GANMVWQAEKDGILTKDKEIVDATSGNTGIALAYVAAARGYKLTLTMPETMSTERKRL
                     LRGLGVNLVLTEGAKGMKGAIAKAEEIAASDPDRYVTLKQFENPANPAIHQQTTGPEI
                     WDATEGKIDVLVAGVGTGGTITGVSRAIKQDKGKQIISVAVEPSESPVITQTLNGEEV
                     KPGPHKIQGIGAGFIPKNLDLSLLDRVEQVSSEEAITTARRLMAEEGILGGISSGAAV
                     AAADRIAKLPEFADKLIVVILPSASERYLSTLLFEGIEA"
     gene            complement(6058..7554)
                     /gene="pepA"
                     /locus_tag="PXD69_002285"
     CDS             complement(6058..7554)
                     /gene="pepA"
                     /locus_tag="PXD69_002285"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDL6284436.1"
                     /translation="MEFSVKNGSVEKQRTACLVVGVYEPRRLCSAAEQLDKLSNGYIS
                     TLLRRGDLEGKAGQTLLLHNVPNVLADRVLLVGCGKERELTERQYKQIIQKSVQTINE
                     TGSMEAVSFLTELHVKGRTPYWNVRFAVEAIQEQLYAYNDFKSIKPEVRRELRRVIFN
                     VAHRKDLPDAERALEHGKAVALGISHAKNVANCPPNVCNPHYLAELAKGLAYDYPAIS
                     TTIVDEKQMAELGMNAYLAVSRASENEAFLSVIEYKGNPNADAKPIILVGKGMTFDSG
                     GLSIKPAEAMDEMKYDMCGAATVYGTIKAIAEMKLPLNVIGLLAGCENAVDGKAYRPG
                     DILTTMSGLTVEVLNTDAEGRLVLCDALSYVERFEPELVIDIATLTGACMIALGNHNS
                     GLMSPHNGLANELLAAAEQADDKAWRLPLGEEYQEQLKSNFADLANIGGRLGGACTAG
                     QFLSNFTKKYTWAHLDIAGTAWKSGAAKGATGRPVSLLTQFLINKAQV"
BASE COUNT         2200 a         1524 c         1631 g         2251 t
ORIGIN      
        1 cttaatgtca ttgagcaacc acaaaaatta aaaatgattt tgaatattat taataaaata
       61 gcacaaacaa attttatcct taatcaactt tgttggttag atgtaaaaag ttataaatac
      121 ttcttcaccc aatataagga gaaatcataa tgaaacgctt gcgttattct tatcttgctt
      181 tgatattagg ttcagcctta cctttatcgg cttatgctga cggttattta agtaacgata
      241 atattcggca atttgatgcc cgttttaatt ttttcctcgc aaatccacta cctgcgccta
      301 ttgcaaaagc agatgggcgt ggtgaagcga ttgagaattt ggtggtgaaa tatgcatcag
      361 attatcttaa tgatatctat cttaaagagg atgttattcg ttttcgccgt tggcagtggc
      421 aagatctcta tacgtcattg gatttaaaaa cgaaacaaaa gcccgattat ttaaatactt
      481 accgattaca ggcggaagcg tactttatca ataagcaata ccaagaagca ttatctcaac
      541 tggatcaaat tctgcggcgt aaccctaatg atgttcatgc aatggcaatg agtgtggttg
      601 caagtcgggt attggaaaat cctaatactg aagccgagcg tttattagcg ctttatcaaa
      661 tctctccaag tattgcgcaa aaggtgcagc aatatctaca ttttacagac actatgcttg
      721 ctgccagcta tggtagtgag cctcaaacaa caatgatccc cgacaccata gcggtatttg
      781 ggcaatcgcc taacccagac ggtactccaa gcaagggatt attgcaacgt cttgagaaaa
      841 ccaaagaaat ggcagagaaa tttccgaatg caaaaattat tttaagtggt ggacctgttc
      901 gttatatcta tgcagaagcg gatgtaatga aaaaatggtt gatagagaat ggcgttgatg
      961 aaagcagact gttgcttgat gatgtggcac gagatactcc gggaaatgct gtcggtatca
     1021 ttgattttat gaaggaatat ggaggtagaa aagtattggg gatcggtacg atcttacatt
     1081 taccgagagc aatgtctgta ttgaaaagct atgcggattc cattggatat gaattggaaa
     1141 ttgattctgc cggaggcggt tctcctccta atgaaaaaaa taaaaaaggt gaagctcttt
     1201 atacatttgt taatgttgct cgtgcaatgg ggttatttac cttgggcgat tttgagaatt
     1261 tgcttgccaa agaacaagct gaaaaagaac aaagagaagc gttggaaaaa gcacagcaga
     1321 attatttaga aaaattggta gctgagcgag atcaagcagt aaaaaatgca gaaaattctg
     1381 caaatgagct ggaagtagcc agacaggcgt tagaaacagc aaaacaggct catcagcaag
     1441 ctgaagagga attgaataaa gaacttagta aaacgcaaga gcagttaaaa cagagtacgg
     1501 aagcccttag tcgtttaata ataaagcaga acaatccttt ttccgagcat tatgttgtac
     1561 agcttaattt gatggaacaa gcaacttatg atctgtaccg taggttagca gaaatagaac
     1621 atacacaaga ttggaattta tggctttcgg atagtctatc caaatatcgt ttaaaaaatc
     1681 gttcaaccga agactatcac ttattacata tcgggctaga tcatcaggtt tcccataatt
     1741 ggtctattgg tggagtattt ggtatcagtc aggggcaaat tgagaatagg acgcataaag
     1801 tgaaagggac atctgctggt atttatgctg gttatcgtcc tacaagtggt ctgttttgga
     1861 caaatttttt taattacagt cattttacta atcaatctgg tgtaacaaaa cgagataata
     1921 atgcatacag tctgagtagt gaaattggaa gaaatatcgt gatgagtcat caatggcaaa
     1981 ttacgccaaa gctgcaatta ggctgggcaa aagctggatc agcacgaatg ttttgggctg
     2041 ggacagggct acgtttagga aaagtgattg aactcaatgc aatcaaactt aaaccttatg
     2101 ctgatattag ctatcgtttt cgaaatcgtc atattgatac cttagatagt ttatctgatc
     2161 gtcatcggaa tgtaatcagt attgggatac aagcagttgg aaatcgccat tattttgcaa
     2221 tcgaaggatc aatgttacac ggggatgcat tgaagcgttc atacggatta cacgcaaatt
     2281 atcactatca atggtaaata ggagcctcta tgaaaaaaat caaaacaacc ctttctgccc
     2341 ttgctttaag cctttctttg ataagtgtaa atagctgggc gataccagct gattatttga
     2401 gccaagacaa tatcagtcaa tatgataagg cgtttaactt tgtattagca aaagtactgc
     2461 ctgcaccaaa aggtaaagaa gatggtcgag gagcgccgat tgagcattta gttattcaat
     2521 atgcgccaga ctatgttgat gacccttatc taaaagagga tgtgctgaat ttccgccgtt
     2581 ggtattggca agcgatgtat gcttcgcttg atcagaaagt taaagagaag ccgacctacc
     2641 ttaacactta ccgtttacaa gcagaggcgt atttcgtcaa taaagagtat cgggaagcac
     2701 tttctcagct cgaccaaatt ttgcgccaaa acccccgtga tattcacgct cttgcgatga
     2761 cagtattagc ttcaagggtg ctagaagata ctgaacaaga aacggctcgt ctttctgcac
     2821 tgaaacagct tgctcccgaa gtcgcacaac gaatgacaga cttttttgcc tttaccgaac
     2881 aaacgctggc ggcaagctac ggtaatgaac cacagacagc aatgatccct gatacgattg
     2941 ccgtttttgg ttctacgcca aacaaagacg gcacaccttc gccgctgttg ttagatcgat
     3001 tacagaaaac caaagagatg gcacaaaaat ttccgcaagc aaaaattatc gtcagtggcg
     3061 gtgctgtgaa aacggaattt gctgaggctg atgtgatggc aaaatggctt agcgaaaatg
     3121 gtattgaaaa agaccgtttg ctacttgatc ctgttgccag agataccccg ggaaatgcgg
     3181 ttgggattat caagctgatg caaacttata atggcaagaa agtattaggt atcggtacgt
     3241 tacaacatat ccctcgtgca acagcggttc tcaaaggtta tgcacagcac attggttatc
     3301 cgattgagat ggattccgtt ggtggtggca agccggcaac accgggaaaa gccaaaatcg
     3361 aggcacttta tacttatgta aatgtggcga gatcaatggg gttgtttgag ttgggggatt
     3421 ttaagtagtt actttattga cagctgctat tgataaaaat cccgcgttaa gcgggatttt
     3481 tttatgttct acgaacgttt cataatctcg aaaaactctt cgttagtttt tgccatcatt
     3541 aatttgtcga ttagccattc gatagcatct acttcgtcca ttgggttgag gactttgcgt
     3601 aacatccaag ttttttggag ttcgtctgct gccattaaga ggtcatcttt acgagtacct
     3661 gagcggttga agtcaatagc cgggaagata cggcgttcag caatacggcg tgagaggtgt
     3721 aattccatat tacccgtacc tttgaactcc tcgaaaatca cttcgtccat ttttgatccg
     3781 gtatccacaa gtgcggttgc gataatggtt aagctgccac cttcttccac attacgggct
     3841 gcaccgaaga aacgttttgg acgatgtaag gcgttagcgt ccacaccacc ggaaaggatt
     3901 ttgccggaaa ccggggtaac ggtgttgtag gcacgggcta aacgagtgat ggagtctaat
     3961 aaaatcacca catctttttt atgctctacc gagcgttttg ctttctcgat taccatctcc
     4021 gcaacttgaa cgtggcgggt tgccggttca tcaaaggttg aggcaattac ttcaccacgt
     4081 acggtgcgtt gcatctctgt tacttcttcc ggacgctcat caattaataa tacgataagc
     4141 tcacattcag gatgattatg ggtgatgctt tgtgcaatat tttgcagtaa cacggtttta
     4201 ccagcttttg gcggggcaac aattaacgct cgctgacctt taccgattgg ggcggctaaa
     4261 tctaaaatac gagcggttaa atcttctttt gatccattgc cacgctccat ttttaagcga
     4321 gaattggcgt gcagaggggt taagttttca aagagaattt tactgcgaga ggcttccggt
     4381 ttgtcatcat taactgaatc aactttcagt agggcaaaat agcgttctcc ctcttttggt
     4441 gggcgaattt taccttctat tttatcgcca gtttgtaagt taaaacggcg gatttggctt
     4501 ggagaaacat aaatatcatc agggccggct aaatatgagc tatctgatga gcggaggaaa
     4561 ccgaagccgt ccggtagaat ttcaagcacg ccttgcccga aaatgtcttc accgcttttt
     4621 gcgtgttgtt taagaatagc aaatacgatg tcttgtttac gtaaacgagc cagattttct
     4681 aagcccattt gattttcacc catttccaca agctttgaaa caggggtgtt tttaagttga
     4741 gtaagatgca taatttgaat gtaaaattgt gattaattaa gattggattt gttgatattg
     4801 attagatacg gccaaccgta aagatgtggc gaagaataac gcaataggag acaaattgca
     4861 aattttttat aaaaaataac cgcttgtttg caataaaaat gccgacatca gccggcattt
     4921 ttatattaat ttaatattac gcttcaatcc cttcaaacag tagcgtactt aaataacgct
     4981 ctgaggctga aggcagaatc actacaatta atttatcggc aaattcaggt agtttagcga
     5041 tgcgatctgc ggcagcaacg gcagcacctg atgaaatacc gcctaaaatg ccttcttctg
     5101 ccattaaacg gcgtgcggtt gtaatcgctt cttcgcttga aacttgttca acacggtcaa
     5161 gcagtgataa atctaagttt ttcggaataa agcctgcacc aatgccttga attttgtgcg
     5221 ggcccggttt gacttcttca ccgtttaaag tttgcgtaat gaccggcgat tcactcggtt
     5281 ctaccgccac tgaaataatt tgcttgcctt tatcttgctt aatagcacgg gaaacaccgg
     5341 taatagtgcc acctgttcct acgcctgcca ctaatacatc aattttacct tcagttgcat
     5401 cccaaatttc aggaccggta gtttgttggt gaattgccgg gtttgccggg ttttcaaact
     5461 gttttaaggt aacatagcga tctgggtcgg aagccgcgat ttcttcagct ttcgcaatcg
     5521 ctcctttcat tccttttgcc ccttcggtta agactaaatt tactcctaag ccacgcaata
     5581 agcgtttacg ctcggtactc attgtttccg gcattgtgag cgttaattta taaccacgag
     5641 cggctgctac ataagccaag gcaattccag tgttaccgct ggttgcatct acaatttctt
     5701 tgtctttggt tagaataccg tctttctctg cttgccacac catattcgca ccaatacggc
     5761 atttcacgct aaaacttggg ttacgccctt ccacttttac cacaatattg ccgttgccaa
     5821 aattctttaa acgcaccagc ggggtattgc cgattgagta tgagttgtct gcatagatag
     5881 tcatagtgat attccttaat aagtattgag attgggattt atcatactta tttttaatcg
     5941 cttttctagt agctggaatt tatttgatat aactaaaaag aatatagggg cgtatgaaga
     6001 ggatcggtct gattttcttt ttgcaaaaac tcgataaaat cagaccgctt gtgagagtta
     6061 gacctgggct ttattgatca aaaattgtgt tagtaaggat accggtctgc cggtcgcccc
     6121 tttggctgcc ccagatttcc aagccgtgcc ggcaatatct agatgcgccc aagtatattt
     6181 ctttgtaaag ttagagagga attgaccggc agtacaggct ccgcctaaac gtccgccgat
     6241 attagcaaga tcagcaaagt tagattttaa ctgttcttga tattcttccc ctaaaggtaa
     6301 acgccacgct ttgtcatcgg cttgctctgc ggcagctaag agttcgtttg ctaaaccgtt
     6361 atgaggtgac atcagcccgc tgttatgatt acctaaggca atcatgcaag caccagttag
     6421 ggtagcaata tcaatcacta attccggttc aaaacgttct acatagctga gagcatcaca
     6481 tagcactaaa cgtccttctg catcggtgtt gagtacctca acggttaaac cagacattgt
     6541 agtgagaata tcccccggtc gataggcttt gccatcaacc gcattttcac agccggcgag
     6601 taagccgata acattgagtg gtaatttcat ctcggcaatt gctttgattg taccgtaaac
     6661 agtagcagct ccgcacatat cgtatttcat ttcgtccatc gcctccgcag gtttaatgga
     6721 taaaccgcca gagtcaaagg tcattccttt gccgactaag ataatcggct tcgcatcagc
     6781 attcgggttg cctttatatt caatcactga aagaaaggcc tcattttcag aggctctgga
     6841 aaccgctaag taagcattca ttcccaattc tgccatctgt ttttcatcaa caatggtagt
     6901 tgaaatggca ggatagtcgt aggctaaacc cttagccaat tcggctaaat agtgaggatt
     6961 acacacatta ggcggacaat ttgctacatt tttagcgtgg ctgattccaa gtgctacggc
     7021 ttttccgtgt tctaaagctc gttcggcatc aggaagatct ttacggtgtg cgacattaaa
     7081 aatcacacgg cgtaattcac ggcgaacttc aggtttgatg cttttgaaat cgttataggc
     7141 atatagttgt tcttggattg cctctaccgc aaatcgcaca ttccaataag gtgttctacc
     7201 tttaacgtgc agttcggtta aaaagctgac agcttccatt gaaccggttt cattaatagt
     7261 ttgtacactt ttttgaataa tttgtttgta ttggcgttca gttaattcac gctcttttcc
     7321 acagccgact aataatactc gatcagcgag tacattcggc acattatgca agagtaaggt
     7381 ttgccctgct ttgccttcta aatctcctct tctcagtaat gtgctgatat agccgttact
     7441 taatttatca agctgttctg cggcagaaca taatcggcgg ggttcataga caccaacaac
     7501 caaacaggcg gttctttgtt tctcaacact gccatttttg acactaaatt ccatttttcc
     7561 tccttaattt ttattgctac agattttata atgccaacat aatcat
//
LOCUS       DANLXO010000116         7487 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.117, whole genome shotgun sequence.
ACCESSION   DANLXO010000116 DANLXO010000000
VERSION     DANLXO010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7487
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.117"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            37..456
                     /locus_tag="PXD69_002286"
     CDS             37..456
                     /locus_tag="PXD69_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS sensor domain-containing protein"
                     /protein_id="HDL6284437.1"
                     /translation="MVPSNEAVLKAVHDTLVISTTDLQGVITYANDLFCKLTGFTREE
                     LIGQPHNIVRHPAVPKEVYKDMWDTIQAGKIWTGIVPNCGKGGVVYVVDTTVQPMFDE
                     TGKITGYISVRRVINDLMTNFEAVESAKEIFDDFYGE"
     gene            527..2083
                     /locus_tag="PXD69_002287"
     CDS             527..2083
                     /locus_tag="PXD69_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase flavoprotein subunit alpha"
                     /protein_id="HDL6284438.1"
                     /translation="MSLIPHIHIAYGSESGNAEKLAQQLAIQPFLLPYSPTLSTLNET
                     DLSQLSAESLLLIVTSSFGDGEPPENADEFAEKLENLTACNLQYAIFGLGDITYDKFC
                     GYSKQLDSLLQQKQAKAVIARVDADLNYQEIFKQWLPLVEQALHSTNKETIQHSLSVQ
                     AYGEEMAYQAEVLEIKHLANSSPAVYHIRLSLKESGIFYQAGDLIYVKVQQPDRLLNE
                     YAEWFNDQNAVALLRHKELRLLSKNVLRDIQKICGSNELKDLTKISNKKALEQYVYGR
                     DLLDVLRDFDPNKSVTLADLEPILSNLAARAYSISSCGKTHPDYVDLCIRHVSYHLNG
                     RDYQGTASGYLSELQAGDFVSIFANANPNFRLPETLTAPVVMIGSGTGIAPHIAFLQA
                     LEQQYQGVESYLFFGERYRDKDFLYQTELENYLAKGTLTQLFTAFSRDQAEKFYVQDA
                     LSQQAELVWHLIQQGAYFYICGSKAMSKAIDAELIKIADQIGGDPYIDDFNNIIAKLV
                     AEGRLMRDVY"
     gene            complement(2141..2398)
                     /gene="rpsQ"
                     /locus_tag="PXD69_002288"
     CDS             complement(2141..2398)
                     /gene="rpsQ"
                     /locus_tag="PXD69_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDL6284439.1"
                     /translation="MTDKIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKL
                     HVHDENNEAKLGDVVEIKECRPISKTKSWTLVRVVEKAVVA"
     gene            complement(2398..2589)
                     /gene="rpmC"
                     /locus_tag="PXD69_002289"
     CDS             complement(2398..2589)
                     /gene="rpmC"
                     /locus_tag="PXD69_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDL6284440.1"
                     /translation="MKAQELRNKSVEELNGELVNLLGEQFKLRMQAATGQLQQTHQLK
                     QVRRSIAQVKTVLTEKAGE"
     gene            complement(2589..2999)
                     /gene="rplP"
                     /locus_tag="PXD69_002290"
     CDS             complement(2589..2999)
                     /gene="rplP"
                     /locus_tag="PXD69_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDL6284441.1"
                     /translation="MLQPKRTKFRKVHKGRNRGIAGGTEVSFGSFGLKAIGRGRLTAR
                     QIEAARRAMSRAVKRQGKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVSEEVARNAFALAAAKLPFKTTFVTKTVM"
     gene            complement(3013..3720)
                     /gene="rpsC"
                     /locus_tag="PXD69_002291"
     CDS             complement(3013..3720)
                     /gene="rpsC"
                     /locus_tag="PXD69_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDL6284442.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLN
                     KELANASVSRITIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQIN
                     IAEVKKPELDAKLVADSIASQLERRVMFRRAMKKAVQNAMKLGAKGIKVEVSGRLGGA
                     EIARSEWYREGRVPLHTLRADIDYSTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESE
                     KEPAAQPKKAPRGKGRK"
     gene            complement(3740..4072)
                     /gene="rplV"
                     /locus_tag="PXD69_002292"
     CDS             complement(3740..4072)
                     /gene="rplV"
                     /locus_tag="PXD69_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDL6284443.1"
                     /translation="METIAKHRYARTSAQKARLVADLIRGKKVSVALEILTFTNKKAA
                     TLVKKVLESAIANAEHNDGADVDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            complement(4083..4358)
                     /gene="rpsS"
                     /locus_tag="PXD69_002293"
     CDS             complement(4083..4358)
                     /gene="rpsS"
                     /locus_tag="PXD69_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDL6284444.1"
                     /translation="MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSM
                     IGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHAADKKAKK"
     gene            complement(4389..5210)
                     /gene="rplB"
                     /locus_tag="PXD69_002294"
     CDS             complement(4389..5210)
                     /gene="rplB"
                     /locus_tag="PXD69_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDL6284445.1"
                     /translation="MAIVKCKPTSAGRRHVVKVVNAELHKGKPFAALLDTKSKTGGRN
                     NLGRITTRHIGGGHKQHYRLIDFKRNKLDIPGVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLTAGDQIQAGASAPIKVGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGA
                     YVQIIAREGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRWRGIRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRHNKRTDKFIVRRRGK"
     gene            complement(5229..5534)
                     /gene="rplW"
                     /locus_tag="PXD69_002295"
     CDS             complement(5229..5534)
                     /gene="rplW"
                     /locus_tag="PXD69_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDL6284446.1"
                     /translation="MIQQERLLNVLKAPHISEKATNNAEKGNTIVFKVALDANKVEIA
                     NAVEELFEVKVDSVRTVVVKGKTKRRGAKVGRRSDWKKAYVTLQEGQSLDFVEGAAE"
     gene            complement(5531..6133)
                     /gene="rplD"
                     /locus_tag="PXD69_002296"
     CDS             complement(5531..6133)
                     /gene="rplD"
                     /locus_tag="PXD69_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDL6284447.1"
                     /translation="MELQVVGANALTVSETTFGREFNEALIHQVVVAYAAGARQGSRA
                     QKTRAEVSGSGKKPWRQKGTGRARSGDIKSPIWRSGSVTFAAKPQDHSQKVNKRMYRG
                     AIKSILSELVRQDRLVVVEKFEIDAPKTKVLAQKLKDMALNDALIITANVDENLFLAA
                     RNLYKVDVRDVQGIDPVSLIAFDKVVVTVDAVKQIEEMLA"
     gene            complement(6149..6778)
                     /gene="rplC"
                     /locus_tag="PXD69_002297"
     CDS             complement(6149..6778)
                     /gene="rplC"
                     /locus_tag="PXD69_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDL6284448.1"
                     /translation="MIGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDG
                     YSAIQVTTGSKKASRVTKPEAGHFVKAGVEAGRGLWEFRTTEGEEFTLGQEINVDIFT
                     DVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKK
                     MAGHLGAERVTVQSLEVVRVDVERKLLLVKGAVPGATNGDVIVKPAVKA"
     gene            complement(6804..7115)
                     /gene="rpsJ"
                     /locus_tag="PXD69_002298"
     CDS             complement(6804..7115)
                     /gene="rpsJ"
                     /locus_tag="PXD69_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDL6284449.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
BASE COUNT         2185 a         1586 c         1375 g         2341 t
ORIGIN      
        1 catttatatt aatggagatt caacacggct gaacaaattg ttccttcaaa tgaagctgtt
       61 ttaaaagcag tccacgatac tttagttatt tcaacaactg atttacaagg tgttattact
      121 tacgctaacg accttttctg caaattaacc ggttttaccc gtgaagaatt aattggacaa
      181 ccgcataata tcgtacgcca cccagctgta ccaaaagaag tttataaaga tatgtgggat
      241 acaatccaag ccggtaaaat ctggacaggt atcgtaccaa actgcggtaa aggcggtgta
      301 gtttatgtgg ttgataccac cgttcaacca atgtttgatg aaacaggcaa aattacaggc
      361 tatatcagcg ttcgccgtgt aattaatgat ttaatgacca actttgaagc agtagaatca
      421 gcaaaagaaa tctttgatga cttctacggt gaataattaa aaaacaatga ttgcgtgtaa
      481 aagatgatct cttttacacg caatttttta ttttcgagga gtttgtatgt ctctcattcc
      541 ccatatccac attgcttatg gttcggagtc tggtaacgca gaaaagcttg cccaacaatt
      601 agctatccaa ccctttttac ttccctactc acccacactt tctacattaa acgaaaccga
      661 tttaagccaa ttatctgccg agagtttatt gcttattgta accagctcct ttggtgatgg
      721 cgaaccacct gaaaacgccg atgaatttgc agaaaaattg gaaaatttga ccgcttgtaa
      781 tctgcaatat gcgatattcg ggctaggtga tattacttat gataaattct gtggctatag
      841 caaacaacta gattcattat tacaacaaaa acaagctaaa gctgtgattg caagggttga
      901 tgccgattta aactatcaag aaatttttaa acaatggcta cccctagtgg agcaggcatt
      961 acattcaaca aacaaagaaa cgatccaaca ttccctttct gttcaagctt acggcgagga
     1021 aatggcatac caagcagaag tgttggaaat taagcatttg gcaaactcaa gccctgcggt
     1081 gtatcacatt cgtttatcat taaaagagag cggtattttc tatcaagcag gggatttaat
     1141 ttatgtcaaa gtgcagcaac cagacagact attaaatgaa tatgcagaat ggtttaacga
     1201 tcaaaatgca gttgcattac tacgccataa agaactccga ctactaagta aaaatgtact
     1261 gcgtgatatt caaaaaattt gcggcagtaa tgaactcaaa gatttaacta aaatttccaa
     1321 taaaaaagca ttggaacaat atgtctatgg gcgggattta ttagacgtat tacgcgattt
     1381 tgacccaaac aaaagcgtga cattagccga tttagagcca attttatcta acttagccgc
     1441 acgagcctat tcaattagct cttgcggtaa aactcaccct gattatgttg atttatgtat
     1501 ccgccacgtt tcgtatcatt taaacggtag agattatcaa gggactgcaa gtgggtattt
     1561 atccgaatta caagcgggcg attttgtctc gatttttgca aatgccaatc cgaatttccg
     1621 tttacccgaa acattaaccg ctccggtggt gatgattggc tcaggtactg gcattgctcc
     1681 gcatatcgca tttttacaag cgttagagca gcaatatcag ggggttgaaa gctatttatt
     1741 cttcggcgag cgttatcgtg ataaagattt tctgtatcaa acggaactgg aaaattactt
     1801 agcaaaaggc accttaactc agctgtttac tgctttttca cgtgatcagg cagagaagtt
     1861 ttatgtgcaa gatgccctat cgcaacaagc agagttagtt tggcatttaa ttcagcaagg
     1921 ggcttatttc tatatttgtg gtagcaaagc aatgagtaaa gcaatagatg cggaactcat
     1981 caaaattgca gatcaaattg gaggcgatcc ttatattgat gatttcaata atattattgc
     2041 aaaattggtc gcagaaggcc gattaatgcg agatgtatat tagcaaatga aaaaaactaa
     2101 aaacccagca aaagctgggt ttttatttaa tcatagttca ttaagcaaca actgctttct
     2161 caactacacg aactaaagtc caagatttag tttttgaaat aggacgacat tccttaattt
     2221 caacaacatc acctaattta gcttcattgt tttcatcgtg tacatgaagt ttagtagtac
     2281 gacggataaa cttaccgtat aacggatgtt taactgtacg ttcgatagca acaacaaatg
     2341 atttatccat tttgtcgcta accactttac cttgtactgt acgaatttta tcagtcatta
     2401 ttcacccgcc ttttcggtta atacagtttt aacttgtgca atactacgac gcacttgttt
     2461 taactggtgg gtttgttgaa gctgaccggt ggctgcttgc atacgcaatt tgaattgttc
     2521 acctaaaagg ttcactaact caccattcag ctcttcaaca cttttattac gtagttcttg
     2581 agctttcatt acatcaccgt cttagttaca aatgtggttt tgaacggaag tttagctgcc
     2641 gctaatgcaa acgcattgcg tgcaacttct tcagaaacac catccatttc atagagaact
     2701 ttacccggtt ggattaaggc tacccagtac tcaacgttac ctttaccttt acccatacgg
     2761 acttctaatg gtttttcagt aattggtttg tctgggaaca cacggatcca gattttacct
     2821 tgacgtttaa ccgcacggct catcgcacga cgagcagctt caatttgacg agctgttaaa
     2881 cgaccacggc caatagcttt taaaccaaat gaaccgaagc tcacttctgt gccacccgcg
     2941 ataccacggt tacggccttt gtgtacttta cggaattttg tgcgttttgg ttgtaacatt
     3001 cagtgattct ccttatttac gacctttgcc acgtggcgcc tttttaggct gtgccgctgg
     3061 ttctttttca gattcaatca ctgcagccat tccaccaaga atttcacctt tgaagatcca
     3121 cacttttacg ccgattacgc cgtaagtagt gtgagcttca gcagtactat aatcgatgtc
     3181 tgcacgaagc gtatgtagag gtacacgacc ttcacgatac cattctgagc gagcaatttc
     3241 tgcaccacct aaacgaccgc taacttcaac tttgatacct ttagcaccta atttcatcgc
     3301 gttttgaact gcttttttca ttgcacgacg gaacatcaca cgacgttcaa gttgagaagc
     3361 gatgctatct gcgactaatt tcgcatctag ctctggtttt ttcacttcag cgatgttgat
     3421 ttgagctgga acgccagcga ttttcgcaac tgcgttgcgt aatttttcaa catcttcacc
     3481 ttttttaccg ataacgatac ccgggcgagc tgtgtgaata gttacacgaa tgctttttgc
     3541 aggacgctca atagtgatgc gtgatacaga agcgttcgct aactctttgt ttaaaaattt
     3601 acgtactttg aagtcgccgt ctaagttatc agcgaaatct tgtgtattcg cgaaccaagt
     3661 agagttccaa ggtttaacaa tacctaggcg aataccatta ggatgtactt tctgacccat
     3721 ttgttattct cctacttaat taacgatctg acacaaccac agtgatgtgg cttgtacgtt
     3781 ttaaaatacg atctgcacga ccttttgcac gtggcattac acgtttcatg cttggacctt
     3841 catcaacgaa gattttagca actttaagat catcgacatc tgcaccgtca ttatgctctg
     3901 cgtttgcaat agctgactct aatactttct taacaagcgt cgctgctttt ttgttagtga
     3961 aagttaagat ttctaatgct acagaaactt ttttaccgcg aattaaatca gcaactaagc
     4021 gagctttttg ggcagaagta cgagcgtaac gatgtttagc aatagtttcc atcttttacc
     4081 tcttatttct tagctttctt atctgcggcg tgaccgcggt atgtacgagt cggtgcaaat
     4141 tcacctaatt tatgaccgat catttcgtcg gaaacataaa caggaacgtg ctgacgacca
     4201 ttatggactg cgatggtcaa accaatcatt gatggaatga tcattgaacg acgggaccaa
     4261 gttttaattg gttttttatc cccgctttcc accgccttct ctaccttctt caacaagtgt
     4321 aggtcaagga aaggaccttt cttgagggaa cgtggcattg gtgtttacct tttagttaat
     4381 gaattaaatt atttgccacg acgacgtacg atgaatttat cagtacgttt gttgtgacga
     4441 gttttcttac ctttggtttg aacgccccaa ggtgtaacag gatgtttacc gaagttacga
     4501 ccttcaccac caccgtgtgg gtgatctacc gggttcattg cagtaccacg aacagttgga
     4561 cgaatacctc tccaacggtt tgcacctgct ttaccaagaa cgcgaagcat atgctctgag
     4621 ttacctactt caccaatggt tgcagtacac tcagctaata ctttacgcat ttcgcctgaa
     4681 cgaagacgta aagttacata gttaccttca cgggcaatga tttgaacgta agcaccagca
     4741 gaacgtgcaa tttgaccacc tttaccaggt tttaattcaa cgttgtgtac agttgtacct
     4801 actgggatgt tacgcattgg taatgcgtta cctactttaa tcggagctga agcacccgct
     4861 tgaatttgat caccagcagt taaacctttt ggtgctaaaa tatagcgacg ttcaccatct
     4921 ttataaagta ctaatgcgat attcgcagaa cgatttggat cgtattctaa acgctcaaca
     4981 acacccggaa tgtctaattt attacgttta aaatcaatta aacggtagtg ttgtttgtga
     5041 ccgccaccaa tgtgacgagt tgtgatacga cctaagttgt tacgaccacc agttttagat
     5101 ttagtatcta aaagtgctgc aaaaggttta cctttgtgaa gctcagcgtt tacaacttta
     5161 acaacgtgac gacgaccagc ggaggtcggc ttacatttaa cgatagccat ttattttatc
     5221 tcctctgatt actctgccgc accttcaacg aagtcaagcg attgaccttc ttgaagagtt
     5281 acataagctt ttttccagtc actacgacga ccaactttag caccacggcg tttagtttta
     5341 cctttaacta ctacggtacg aacagaatca acttttactt caaaaagttc ttcaactgca
     5401 tttgcaatct caactttgtt tgcatctaat gcaactttga atacgattgt attgcctttt
     5461 tctgcgttgt ttgtcgcttt ttcagagata tgtggtgctt taagcacgtt tagcaaacgt
     5521 tcttgttgaa tcatgctaac atctcctcaa tttgttttac tgcatctacg gttacaacca
     5581 ctttatcgaa agcaattaag ctaactgggt caataccttg cacatcacgc acatcaactt
     5641 tatataagtt gcgtgctgct aagaataaat tctcatctac gtttgcagta atgataagag
     5701 cgtcatttaa cgccatatct tttaattttt gtgctaatac tttagttttt ggtgcatcga
     5761 tttcgaattt ctcaacaacc actaaacggt cttgacgaac taattcagaa agaatgcttt
     5821 tgattgcacc acggtacatt cttttgttca ctttttggct gtgatcttgt ggtttcgcag
     5881 caaaagttac actacccgaa cgccaaattg gtgatttaat atcaccagaa cgtgcacggc
     5941 ctgtaccttt ttgacgccaa ggttttttac ctgaaccaga cacttcagca cgagtttttt
     6001 gagcacgaga tccttgacga gcacctgctg cataagcaac aactacttgg tggattaatg
     6061 cttcattgaa ctcacgtccg aaggtagttt cagaaacagt tagtgcgttt gcacctacaa
     6121 cttgtaattc catctctatc tcctagactt atgctttaac tgccggtttt acgataacat
     6181 caccattagt tgcaccagga acggcacctt taactaataa taatttacgc tcaacatcta
     6241 cacgaacaac ttcaagtgat tgaacggtta cacgctctgc acctaagtgt cctgccattt
     6301 ttttaccttt aaacacacga cctggagttt ggttttgacc aatagaacca agtacacgat
     6361 gtgataaaga gttaccgtga gttgcatctt gagtacggaa gttccaacgt ttaacaccac
     6421 cttggaagcc tttacctttt gatgtaccag taacatcgac ttttttaaca tcagtaaaga
     6481 tgtcaacatt gatttcttga cctaaagtga attcttcacc ttcagtagta cgaaattccc
     6541 ataaaccgcg tccagcttca acacctgctt tcacgaaatg acctgcttct ggtttagtta
     6601 cacggctagc ttttttagag ccagtagtaa cttgaattgc agagtagcca tcgttttcaa
     6661 gggttttaac ttgagtaaca cggttggctt cgatttcgat aacggtaact ggaatagaca
     6721 cgccgtcttc agtgaaaacg cgggtcatac caactttacg accgattaaa ccaatcattg
     6781 taataacctc ttaaaattcc caattaacct agactaatct gaacgtcaac gccagcagct
     6841 agatctaaac gcattaatgc atcaacagtt ttttctgttg gttcaacaat atcaactaaa
     6901 cgtttgtgag tacggatttc atattggtca cgtgcatctt tattcacgtg tggagaaatc
     6961 aatacagtga aacgttcttt acgagttggt aaaggaattg gaccacgaac ttgtgcacca
     7021 gtacgtttag ctgtttctac gatctccgca gtagattgat caattaaacg atgatcaaat
     7081 gcttttaagc ggatacggat tctttggttc tgcattagac cagagctcca attaaaaaat
     7141 ttagctaata aaaaaaccaa actaccactt aacaaattag ttaagggagc tcagttaaac
     7201 ctatatagtt ccaaaattag gaacattgta tacactacaa tatctgtagt gccatttgat
     7261 aaatgattac atcaaatgtc tttagatacc taaagctttg ctatcatact cgtttcattt
     7321 cccttatgca agtaattttt gttttttata ttgacaataa tttgattcga taaaacttct
     7381 aaagatacac aatatttcca atacttcatt tgaagtggct caaataaatt gtatttatgc
     7441 atttttttat tcaaactttt cgagccactt cacaaatcta aaaaatc
//
LOCUS       DANLXO010000117         7461 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.118, whole genome shotgun sequence.
ACCESSION   DANLXO010000117 DANLXO010000000
VERSION     DANLXO010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7461
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.118"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            3..503
                     /locus_tag="PXD69_002299"
     CDS             3..503
                     /locus_tag="PXD69_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL6284450.1"
                     /translation="MQTINEIKEEIYPIFEPIIGTIRLKTYFSYYAVFKDGLMIALYQ
                     NGATYLRIAKKDIEYIRQYPKTCILCDEKIGIQSRKFHYIPQVLIDDTPKFSSLLFGI
                     IEELRTEKYKISQKRATQIRNLPNMNLKLERMLKKIGIHSIHDFTQEGYMSTFIKLIL
                     HRRLTV"
     gene            791..2185
                     /gene="fumC"
                     /locus_tag="PXD69_002300"
     CDS             791..2185
                     /gene="fumC"
                     /locus_tag="PXD69_002300"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDL6284451.1"
                     /translation="MEFRIEKDTMGEVQVPADKYWAAQTERSRNNFKIGPEASMPAEI
                     IEAFGYLKKAAAYANHDLGVLAVEKRDLIAKACDEILANKLDDQFPLVIWQTGSGTQS
                     NMNVNEVVANRAHVLNGGKLGEKSIIHPNDDVNKSQSSNDTYPTAMHIAAYKKVVEHT
                     LPCVKRLQKTLAEKAEAFKDVVKIGRTHLMDATPLTLGQEFSAYAAQLAFGIKALENT
                     LPHLRELALGGTAVGTGLNTPQGYDVKVAEYIAKFTGLPFVTAQNKFEALATHDAIVE
                     THGALKQLAVSLYKIANDVRLLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEAMT
                     MVCAQVLGNDVTISFAGTQGHFQLNVYKPVMAYNFLQSAQLLGDACVSFDEHCAVGIE
                     PNYPRIKQQLDQSLMLVTALNTHIGYENAAKIAKTAHKNGTTLKEEAINLGLVTAEQF
                     DEWVRPEDMVGSLK"
     gene            2312..2422
                     /locus_tag="PXD69_002301"
     CDS             2312..2422
                     /locus_tag="PXD69_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDL6284452.1"
                     /translation="MKKLILIALVTTLGLSACGVKGPLYFPEQAPKHEQK"
     gene            2527..3777
                     /gene="lysA"
                     /locus_tag="PXD69_002302"
     CDS             2527..3777
                     /gene="lysA"
                     /locus_tag="PXD69_002302"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDL6284453.1"
                     /translation="MNHFEYKNNQLFAEEVAIADIIEQYGTPAYVYSRSTLERHWHAF
                     NNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEASKVVFS
                     GVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAPISLRVNPDVDAHTHP
                     YISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLI
                     ILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPG
                     RAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITEVDKTLNRDK
                     AVYDVVGPICETSDFLGKQRELAISEGDLIAIRSAGAYGAAMSSTYNSRPQAAEIMVD
                     GNQAHLIKARATFADLWRLEKLLP"
     gene            3791..4420
                     /locus_tag="PXD69_002303"
     CDS             3791..4420
                     /locus_tag="PXD69_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDL6284454.1"
                     /translation="MKLYGLTGACSFVPHVALEWVKLRANQDYAFQAVSREFIKSAEY
                     LALNPRGNVPLLVDGDLALTQNQAIVHYLDELYPEAKLFGSKTARDKAKAARWLAFFN
                     SDVHKSFVPLFRLPSYAEGNETLTKTIRQQSAEQILEQLAFANAHLENHIFFGEEISV
                     ADAYLYIMLNWCRLLGLDFSHLSQLSAFMQRVEADQGVDNVREQEGLKG"
     gene            4491..5936
                     /gene="tldD"
                     /locus_tag="PXD69_002304"
     CDS             4491..5936
                     /gene="tldD"
                     /locus_tag="PXD69_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HDL6284455.1"
                     /translation="MLNQVSNSLLAPSGLELSHLTQVLDHFSGRHIDYADLYFQLSQD
                     ESWSLEDSIIKEGGFYIDRGFGVRAISGEKTGFAYADQITLKQLEQCAAAARSISPTS
                     GQLSVKNFKKTTACSRYPAINPLETISREQKVELLHLVDKTARMADPRVIQVNANLSA
                     VYEEMLVAATDGTLAADIRPLVRLSVSVLVEQNGKRERGSAGAGGRFGLDWFLAPSET
                     GFSRAESLTKEAVRQALVNLTAIPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRK
                     ESSLFSGKIGQMVTSELCTIVDDGTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQ
                     DKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGNHEFEEMIESVEYGLYAPHFS
                     GGQVDITSGKFVFSTAEAYLIEKGKITKPVTGATLIGSGIEAMQQVSMVGKKMELDPG
                     IGTCGKEGQSVPVGVGQPTVKLDKITVGGRG"
     gene            6000..6881
                     /gene="prmA"
                     /locus_tag="PXD69_002305"
     CDS             6000..6881
                     /gene="prmA"
                     /locus_tag="PXD69_002305"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDL6284456.1"
                     /translation="MAWVQIRLNSTDKQAEEISDFLTEIGAVSVTFMDSQDTPIFEPL
                     PGETRLWGNTDVVGLFDAETDMNLIVEALKTSKLVDENFAHKIEQIEDKDWEREWMDN
                     FHPMQFGKRLWICPSWREVPDPNAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLEGK
                     TVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQ
                     PRELQADVVVANILAGPLKELAPNIITLVKPNGNLGLSGILATQAESVCEAYSEAFTL
                     DPVVEKEEWCRITGRKI"
     gene            complement(7056..7131)
                     /locus_tag="PXD69_002306"
     tRNA            complement(7056..7131)
                     /locus_tag="PXD69_002306"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7096..7098),aa:Trp,seq:cca)
     gene            complement(7197..7273)
                     /locus_tag="PXD69_002307"
     tRNA            complement(7197..7273)
                     /locus_tag="PXD69_002307"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7237..7239),aa:Asp,seq:gtc)
     gene            complement(7284..7399)
                     /gene="rrf"
                     /locus_tag="PXD69_002308"
     rRNA            complement(7284..7399)
                     /gene="rrf"
                     /locus_tag="PXD69_002308"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         2225 a         1663 c         1646 g         1927 t
ORIGIN      
        1 atatgcaaac aatcaatgaa attaaagaag aaatctaccc tatatttgag cctatcattg
       61 gaacaattcg gctaaaaacc tacttttcct actacgcagt ttttaaggat ggattgatga
      121 ttgcattgta tcaaaatgga gcaacttatt tacgtattgc gaaaaaagat attgaataca
      181 ttcgtcagta tcctaaaacc tgtatcttat gcgatgaaaa aattggtata caaagtagaa
      241 aatttcatta tattccgcaa gttctcatag atgatacacc aaaatttagc tcgctactct
      301 ttggaattat agaggaactc cgaacggaga agtacaaaat aagccaaaag cgagctacac
      361 aaatccgaaa cctaccaaat atgaatttaa agttagaaag aatgttgaaa aaaataggga
      421 ttcattccat tcatgatttt actcaagaag ggtatatgtc aacttttatc aaactgattc
      481 tccaccgaag acttactgtt taagctaaac ggagctttaa atcaccaata tatttacacc
      541 ttcacagatc aacaaaaaag ggaactaatg caagaagcaa atcaagcgct atataattca
      601 ggcctaagaa aaagatttaa cgccctgtag ttaaataatg tgatccaaat cataaaatat
      661 aaaaaaacca ataaggaatt gcaattcgca gttcctttct ttttctttta tatgctagta
      721 tcaccttata cctctaaatt attagtgcct actgattttc aattaatcca acaatttagg
      781 agagcgcatc atggaattcc gtatcgaaaa agacacaatg ggcgaagtgc aagttcctgc
      841 cgataaatac tgggcggcgc aaaccgagcg ttcacgcaat aacttcaaaa tcgggccgga
      901 ggcatcaatg ccggcggaaa ttatcgaggc gtttggctat ctgaaaaaag cggctgccta
      961 tgctaatcac gatttaggcg tactagcggt cgaaaaacgg gatttaattg caaaagcctg
     1021 tgatgaaatt ttggcgaaca aactcgatga tcaattcccg ctggtgattt ggcaaaccgg
     1081 ctcgggtacg cagtcaaata tgaacgtgaa tgaagtcgtg gcaaaccgtg cacacgtgtt
     1141 aaacggcggc aagctgggtg aaaaatcgat tattcacccg aatgatgatg tgaataaatc
     1201 ccaatcttct aacgacacct acccaactgc aatgcacatc gctgcttaca aaaaagtggt
     1261 ggaacacacc ctaccttgtg tgaaacgtct gcaaaaaacc ttagcggaaa aagccgaagc
     1321 ctttaaagat gtggtcaaaa tagggcgtac tcacttaatg gatgctaccc cgctcacgct
     1381 cggtcaagag ttctctgcct atgcagcaca gttagcattc ggcatcaaag cattggaaaa
     1441 caccctgcca cacctgcgtg agctggcact cggcggcaca gcagtcggca ccggcttgaa
     1501 taccccgcaa ggttacgatg tgaaagtggc ggaatacatt gcgaaattca ccggtttacc
     1561 gttcgttacc gcccaaaaca aatttgaggc attagcgact cacgatgcga ttgtcgaaac
     1621 ccacggtgca ttaaaacagc ttgcggtgtc gctctacaaa attgccaacg atgtccgttt
     1681 attagcctcc ggtcctcgtt caggcattgg cgaaattctg attccggaaa acgagccggg
     1741 ttcatcaatt atgccgggta aagtaaaccc aacccaatgc gaagcaatga caatggtatg
     1801 tgcccaagta ttaggcaacg atgtaaccat ctcttttgcc ggcacgcaag ggcatttcca
     1861 actgaatgtc tataaaccgg tgatggcgta caacttcctg caatcggctc aactgctagg
     1921 cgatgcgtgc gtgtcgtttg acgaacactg tgcagtcggc attgaaccga actaccctcg
     1981 cattaaacaa cagctcgacc aatcgctgat gttagtgacc gcattaaata ctcacattgg
     2041 ttatgaaaat gcagcgaaaa tcgccaaaac tgcccacaaa aacggcacaa cactgaaaga
     2101 agaggcgatt aacttaggct tagtcacggc agaacagttc gatgaatggg ttcgtccgga
     2161 agatatggtt ggcagcttga aataagccca acccttctct tgtaatctga tttacacctc
     2221 aatctaccgg taagattgag gtgtaatttt ttatagcgag ggtactgatt ttgttttaga
     2281 atgaagcatc attttttaag cggaaaaacc tatgaaaaaa ctcattttaa tcgcattagt
     2341 tactacttta ggcttaagtg cttgtggggt caaaggccca ctctacttcc ctgagcaagc
     2401 ccctaaacat gaacaaaaat aagcattgca agcggtctgt tttggctaaa attttgcaaa
     2461 tttttgtgaa aaaatgaccg cttgttgcct cttttctttc aaaatcccaa acacaacgga
     2521 ctttcaatga accattttga atataaaaac aaccaacttt ttgctgaaga agtcgctatt
     2581 gccgatatta tcgagcaata cggcacgcca gcttatgttt actccagatc tacccttgaa
     2641 cgccactggc acgcattcaa taatgcgttt ggctcgcacc cacatttagt ttgctttgca
     2701 gtcaaatcca actctaacat tgccttgtta aatgtaatgg ctcgtctcgg ttcaggcttt
     2761 gatattgtct ctcaaggcga gttggagcgt gtcttagctg ccggcggcga agcctctaaa
     2821 gttgtctttt ccggtgtggc aaaatcgcac agcgaaatca aacgagcatt ggaagtcggg
     2881 attcgttgct ttaacattga atcggtttcc gaacttcacc gcattaacca agttgccggt
     2941 gaactaggca aaatcgcacc gatttcactg cgggtaaacc cggatgtgga cgcccacact
     3001 cacccataca tttccaccgg tttaaaagaa aacaaattcg gcgtgagcgt tactcaagcc
     3061 cgtgaagtgt atcgcttagc caaaacctta ccgaatgtga aaattaccgg tatggattgt
     3121 cacatcggtt cgcaattaac cgaattgcaa ccttttttag atgcaacgga tcgcttaatc
     3181 atcttaatgg agcaactgcg tgaagacggc attgagctac accacttaga cttaggtggc
     3241 ggtttaggcg tgccttacaa cggcgaagag cctccgcatc cgaccgaata tgccaaagcc
     3301 ttgctggaaa agctcaaagg ctatgaaaac ttagaaatca ttattgaacc ggggcgtgcc
     3361 attaccgcaa atgccggtat tttagtgacg aaggtggaat acttgaaaca aaatgaagat
     3421 cgtaattttg cgattgtcga taccggtatg aacgatatga ttcgcccggc tctgtatgaa
     3481 gcctatatgc aaattacgga agtggataaa accttaaacc gtgacaaagc tgtttacgat
     3541 gtggtcggtc cgatttgcga aacctcggat ttcttaggca aacaaagaga attggcaatt
     3601 tctgaagggg atttaatcgc tattcgttct gccggtgctt atggggcggc gatgtcttca
     3661 acctacaact ctcgcccaca agcggcagaa attatggttg atggcaacca agcccattta
     3721 attaaagccc gagccacttt tgctgattta tggcgtttag aaaaattatt accttaatga
     3781 ggaagaaaag atgaaattat atggattaac cggtgcttgt tcatttgtac cacacgttgc
     3841 cctagagtgg gtgaaattgc gtgccaatca agattatgcg tttcaagctg ttagccgtga
     3901 atttattaaa tcggcggaat atctggcttt aaaccctcgt ggtaacgtac cattgttggt
     3961 tgatggcgac ttggccctca cgcaaaacca agctatcgtc cactatttag acgagcttta
     4021 tccggaagct aaattattcg gcagcaaaac cgctcgtgat aaagccaaag cggctcgttg
     4081 gttagctttt ttcaattcag atgtgcataa atcattcgtg ccactgttcc gcttgccaag
     4141 ttatgcggaa ggcaatgaaa cgctcaccaa aactattcgc caacaatcgg ctgagcaaat
     4201 tttagaacaa ctggcttttg cgaatgctca tttagaaaat catattttct ttggcgaaga
     4261 aatttcggtt gccgatgcgt atctctacat tatgctcaac tggtgtcgcc tactagggtt
     4321 ggatttctct catctttccc aactttctgc ctttatgcaa cgagtggagg cagaccaagg
     4381 cgtagataat gtgcgtgagc aagaaggctt aaaaggttaa ttcaccattg ttcatttaag
     4441 acggtagatt ttatgttaaa atctaccgtc ttttattttt aggaatcacc atgctaaatc
     4501 aggtttcaaa cagcttgctt gctccaagtg ggcttgaatt atcgcactta actcaagtgt
     4561 tagatcactt ctccggccgt catattgatt atgccgatct ctacttccaa ctcagccaag
     4621 acgaaagctg gagcttggaa gacagcatca tcaaagaagg cggtttttat atcgaccgag
     4681 ggttcggtgt gcgagccata tcaggcgaaa aaaccggctt tgcctacgcc gatcaaatca
     4741 cgttaaaaca gcttgagcaa tgtgccgctg ccgcacgttc aatcagccca acaagcggtc
     4801 aattatcggt aaaaaatttc aaaaaaacga ccgcttgttc tcgctacccg gcaatcaacc
     4861 cgctagagac catcagccgt gaacaaaagg tcgaattgct ccatttggtg gataaaaccg
     4921 ctcgaatggc agatccgaga gtgattcaag tgaatgcgaa tctctcagcg gtatatgaag
     4981 aaatgttagt ggcagcgact gacggcacac tggctgcgga tattcgcccg ttagtgcgtt
     5041 tatctgtgtc ggtactggtg gaacaaaatg gcaagcgtga acgaggttca gcaggtgccg
     5101 gtggtcgctt tggtttagat tggttcttag caccaagcga aaccggcttt agccgtgcgg
     5161 aatcgcttac caaagaagcc gttcgccaag ccctcgttaa tctcacagcc attcctgcac
     5221 cggcaggcac gatgccgatt gttctcggtg ctggctggcc gggcattttg ctccacgaag
     5281 cagtcggaca cggcttggag ggtgatttta accgtaagga atcttcgctc ttcagtggta
     5341 aaatcgggca aatggtcacc tctgagcttt gcaccattgt tgatgacggt acggtgccga
     5401 atatgcgagg ctcaatcacg gtagatgacg aaggcgtgcc ttcgcaacgt aatgtgttaa
     5461 ttgaaaacgg cattctaaaa ggctatatgc aagacaaact caatgcccgc ctgatgggag
     5521 ttgccccaac cggcaacggc agacgggaat cttacgctca tttgccgatg ccacgaatga
     5581 ccaacaccta cctcaccgaa ggcaatcacg aatttgaaga gatgattgaa tcggtcgaat
     5641 acggtttata tgctcctcac ttcagtggtg gacaagtgga tattacctcc ggcaaatttg
     5701 tgttctccac cgccgaagcc tacttaatcg aaaaaggcaa aatcaccaaa cctgttaccg
     5761 gtgcaaccct gatcggcagc ggcatagaag caatgcaaca agtttcaatg gtcggcaaaa
     5821 aaatggaact cgaccccggc atcggcactt gtggcaaaga agggcaatcc gtaccagtcg
     5881 gcgtagggca gcctacagtg aagttggata aaattacggt ggggggaaga gggtaatctc
     5941 tccccgtttg caaaatataa agaaaatatc accgcttgta gcgataaaag gaaaacaaaa
     6001 tggcttgggt acaaattcgt ttaaacagta cagataaaca ggctgaggaa atcagcgatt
     6061 ttttaaccga gattggagcg gtgtcagtga cttttatgga tagtcaagat accccaattt
     6121 ttgaacctct tccgggggaa acccgtcttt ggggaaatac cgatgtggtt gggcttttcg
     6181 atgcggaaac tgatatgaat cttatcgtag aagcactaaa aaccagcaaa ttggtggacg
     6241 aaaactttgc tcacaaaatc gagcaaatcg aagacaaaga ctgggaacgg gagtggatgg
     6301 ataatttcca cccaatgcag tttggcaaac ggttatggat ctgcccaagc tggcgtgaag
     6361 taccagaccc gaatgcagtg aatgttatgt tagaccctgg tttagcattt ggcaccggca
     6421 cacacccaac gacctcgctt tgcttacaat ggttagatag cttagattta gaaggcaaaa
     6481 cggttatcga cttcggctgt ggctccggta ttttagctat cgctgcactt aaactcggtg
     6541 caaaacaagc catcgggatt gatatcgacc cacaggcgat tttagctagt caaaacaatg
     6601 ctgaggcgaa cggcgtagca gaaaaactac aactattctt agccaaagat cagccaagag
     6661 agttacaagc cgatgtcgtt gttgcgaata ttctagccgg cccactcaaa gagttagcac
     6721 cgaatatcat cacgctggtt aaaccaaacg gcaatttagg cttatccggc attcttgcta
     6781 ctcaggctga aagtgtgtgt gaggcttata gcgaagcctt tacgctagac cctgttgtag
     6841 aaaaagaaga atggtgtcgt attacaggcc gcaaaatcta atataagaag ccctgtttta
     6901 aacagggctt actttttgat aaattctact actctttacc tgtcttggga atcgttctcc
     6961 ctaaattaat taacacaagc ggtagaaata acaggaaaat ttacaaatta cataaatgaa
     7021 aaaagccgac tgaaatcagt cggctttcta aataatggca ggggcggaga ggctcgaact
     7081 cccaacaccc ggttttggag accggtgctc taccaattga actacgcccc tattgatagg
     7141 tattcatttt gcacttatag gggcgaatta ctattcgccc ctgcattaaa gattattggc
     7201 ggaacggacg ggactcgaac ccgcgacccc ctgcgtgaca ggcaggtatt ctaaccagct
     7261 gaactaccgc tcctaaatta atagattgat aatgccctac tctcacatgg cgaatcacca
     7321 cactaccatc ggcgttactg cgttttactt ctgagttcgg tatggagtca ggtagagcca
     7381 cagcactctg gttatcaatc aaattctttc atttagtcag tttactaaaa tatagtttat
     7441 actttctaat aaactcacta a
//
LOCUS       DANLXO010000118         7169 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.119, whole genome shotgun sequence.
ACCESSION   DANLXO010000118 DANLXO010000000
VERSION     DANLXO010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7169
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.119"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..657)
                     /locus_tag="PXD69_002309"
     CDS             complement(<1..657)
                     /locus_tag="PXD69_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284457.1"
                     /translation="MITSNLERSFHGLNIAQHNYKIFLDESGGNIGKLKHTPNDKKGS
                     NFNRTISSHIGVPPVFVLGGIAQISNANLIAPDWRKLLHLQNKELKFSKIGKNFFNKL
                     GSKELRKVLEWINENNLCIHFALYDWVYFYDVDIIDSALIESDVCSVWKYLSEKIGNS
                     NRYKEIKDYQRKVGLDKQSDDIIYLFYIKELLHDFIINNLQWFLSEIYNNHYKKIDNQ
                     E"
     gene            complement(684..1358)
                     /gene="cas4"
                     /locus_tag="PXD69_002310"
     CDS             complement(684..1358)
                     /gene="cas4"
                     /locus_tag="PXD69_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HDL6284458.1"
                     /translation="MGDLQNSAEILPLVQPKFGDDKRSISLSALQHYAFCPRQCALIH
                     NEQVWAENYLTAQGQALHERVDSGEPEVRKGIRFERTVHVAAEKLGISGILDLVERDL
                     KTGELKPVEYKRGKPKLDPIDEIQLCAQALCLEEMTEQTINEGALWYMQTRHRLPIIF
                     STELRTKTLATIAEVRSLLDSGTTPPPEYSKRCKACSLIDLCQPKLLERDRSKGYVVG
                     VFGSLL"
     gene            complement(1358..2221)
                     /gene="cas7c"
                     /locus_tag="PXD69_002311"
     CDS             complement(1358..2221)
                     /gene="cas7c"
                     /locus_tag="PXD69_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
                     /protein_id="HDL6284459.1"
                     /translation="MSIQNRYEFVFFFDVTNGNPNGDPDAGNMPRLDPETSKGLVTDV
                     CLKRKIRNFIEMSYENEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKEEAKAR
                     EITAWMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSIDPIIPLEVSITRMAVTN
                     EKDLEKERTMGRKYIVPYALYRVHGFISAKLAEKTGFSDEDVQKLWQALQLMFEHDRS
                     AARGEMAARKLIVFKHDSELGNQPAHKLFDSVKVERINGEKDTPAKDYDDYCISVQTE
                     GLTGVTVEELL"
     gene            complement(2231..4012)
                     /gene="cas8c"
                     /locus_tag="PXD69_002312"
     CDS             complement(2231..4012)
                     /gene="cas8c"
                     /locus_tag="PXD69_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
                     /protein_id="HDL6284460.1"
                     /translation="MITALTRYYYRLAAQEDRLTGEAKVPSYGFSEEKIGWVLELDSK
                     GNLVNVISNLTEDKKPKPKLMSVPRPEKRTSGIKPNFLWDKTAYVLGIESNPDKATAK
                     DQPINFAEKTFEAFKQYHLDLLADSNDEGLMAIRNFLQQWQPTHFAESICPREILDAN
                     VVFKLVGTSGYIHQREAAQTLWTSLLINQSDNAEKGLCLISGKLSPIQRTHPPIKGVF
                     GGQSSGGSIISFNKESFTSFGKEQGSNAPVSEQAAFAYTTALNYLLRTEKHRLTIGDA
                     STVFWAEADNTTQAEAAEGFFAALMTPPDDEQENQKIFEELQKISKGRPLAEISPELS
                     ENTRFYVLGLAPNAARISVRFWLDTTFGQLAKNLSEHWQDLALEPCPWKTPPSIWRLL
                     LQTASLGKSENISPVLAGEMARAVISGHLYPMSLLSQLVTRIRADGDINGLRVALMKA
                     VLQRKFRKGFIKEGVPMSLNKESDNQAYLLGRLFAVLERIQSQALGELNAGIADRYYG
                     SASAVPFSVFPRLLSGAKHHLSRLRKDKGGMAVNLDKDLGEIIASLPENFPRHLSIDE
                     QGRFAIGYYHQKQSYFAKKETTESIEN"
     gene            complement(4034..4711)
                     /gene="cas5c"
                     /locus_tag="PXD69_002313"
     CDS             complement(4034..4711)
                     /gene="cas5c"
                     /locus_tag="PXD69_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
                     /protein_id="HDL6284461.1"
                     /translation="MPNKIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVH
                     WKPAIRWVIDKIYVLQPIQFESVRRNELGSKISASKISGAMKRKTVADLYTVIEDDRQ
                     QRAATVLKNVGYVIEAHAVLTKMAGEAETVTKHIEMFKRRAKKGQCFQQPCMGVREFA
                     ANFALIDDDEPLPECFLAENERDRDLGWMLHDIDFEHGNQPRFFRAEMKNGVIDVPPF
                     YAEEVKS"
     gene            complement(4953..6704)
                     /locus_tag="PXD69_002314"
                     /pseudo
     CDS             complement(4953..6704)
                     /locus_tag="PXD69_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250669.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
     gene            complement(6694..7122)
                     /locus_tag="PXD69_002315"
     CDS             complement(6694..7122)
                     /locus_tag="PXD69_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284462.1"
                     /translation="MAGDVPMTSCIGKVEEPLIITPGVGKYKKGYGQPFDAHREKANE
                     AIDSASSILCIGYGFNDDHLQTHLTGKIKSGVKTLLLTRGLSENARNVVKEAPNCKAL
                     IFDGDKAGTRVVSKQEETFIPNVHWWDVEFFVKEILENGK"
BASE COUNT         2028 a         1614 c         1305 g         2222 t
ORIGIN      
        1 ttcttgatta tctattttct tgtaatgatt attataaatt tctgataaaa accattgtaa
       61 attattaata ataaaatcat gtaataattc ttttatataa aaaagataaa taatatcatc
      121 cgattgctta tctaatccta cctttctttg atagtctttt atttctttat atcgattaga
      181 attaccaatt ttttctgaaa gatatttcca aacactacat acatcacttt ctattaaagc
      241 actatctata atatctacat cgtagaaata cacccaatca tacaaagcaa aatgtataca
      301 taggttattt tcattaatcc attccaagac ttttcttaat tcttttgaac caagtttatt
      361 aaaaaaattc tttcctattt tactaaactt taattcctta ttctgcaaat gaaggagttt
      421 tctccaatca ggagcaatta aattagcatt actaatttga gcaatccctc ctaatacaaa
      481 tacaggagga accccaatgt gggaagaaat ggttctatta aaattactac cttttttatc
      541 attaggcgta tgttttaact tcccaatatt tccaccactc tcatcaagaa atattttgta
      601 gttatgctgt gctatattta atccgtgaaa tgatctttct aagtttgaag ttatcacaac
      661 aagtccctcc ccaaagtagg taattataat aaagatccaa acactcccac cacatacccc
      721 ttcgatctat ccctttccaa caactttggt tggcagaggt cgataagcga gcaggctttg
      781 cagcgtttgc tgtattctgg aggaggtgtg gttccgctat ctaagagcga ccgcacttcg
      841 gcaatggtgg cgagggtttt ggtgcgtagt tcggtggaaa aaatgatcgg caaacggtgg
      901 cgagtttgca tataccacaa cgccccttcg ttaatcgtct gctctgtcat ttcttccaaa
      961 cataaggctt gggcacagag ttggatttca tcaatcggat caagtttggg cttgccacgt
     1021 ttgtattcca ctggttttag ctcgcctgtt tttaggtctc gctcaaccaa atccaaaatg
     1081 ccgcttatgc ctaatttttc ggctgcaacg tgaaccgttc gctcaaagcg aatccctttg
     1141 cgaacttctg gctcaccact atctacccgc tcgtgcaacg cttgaccttg tgcggtgaga
     1201 tagttttctg cccacacctg ttcgttgtgg atcagcgcac attgacgtgg gcagaaggca
     1261 tagtgttgca aagcggaaag cgaaattgac cgcttgtcat cgccaaattt tggctgaaca
     1321 agcggtaaaa tttccgcaga attttgcaaa tcgcccatta cagtaattct tcaacggtta
     1381 cacccgttaa gccttcggtt tgtacgctga tacagtaatc gtcatagtct ttcgctggcg
     1441 tgtctttttc accgttgatt cgctcaactt ttaccgagtc aaacagtttg tgtgcaggtt
     1501 ggttgcctaa ttcgctgtcg tgtttaaata cgatcagttt acgagctgcc atttcgcctc
     1561 gtgcggcaga acggtcgtgt tcaaacataa gttgcaaggc ttgccaaagt ttttgtacat
     1621 cttcatcaga aaagcccgtt ttttcagcga gtttagctga aataaagccg tgaacacgat
     1681 aaagtgcgta aggcacgata tatttacgcc ccatagtccg ttctttttca agatcttttt
     1741 cgttggtcac tgccattcgt gtgatcgata cttctagcgg aataatcgga tcgatagatt
     1801 gagcgaacgc caattgcact gggcctcgca cctgtccgct gtttacttcg gtagtcatta
     1861 ccgccccaaa ggtgcgaata tcgaaaaagt ttttgcacat ccaagcggta atttctcggg
     1921 ctttagcttc ctcttttggt agttttttcg cttccgattc aatccctaat gcttcataag
     1981 cacgtttgtt ttgtaaattc agaacacttt tttctttaac ataaatttcg taacccgcct
     2041 cgttttcata gctcatttca ataaaattgc ggattttgcg ttttaggcaa acatcggtga
     2101 ctaaaccttt actggtttca ggatcaaggc gtggcatatt tcctgcatct ggatcaccat
     2161 ttgggttacc gttggttaca tcaaagaaaa aaacaaattc atagcggttt tgaatagaca
     2221 tagtgtttcc ttagttttca atagactcag tggtttcttt tttagcgaaa tagctttgtt
     2281 tttggtggta ataaccaatc gcaaaacgcc cttgttcatc gatacttaaa tggcgaggga
     2341 aattttccgg caagctggca ataatctcac ctaaatcctt atccagatta accgccattc
     2401 cgcccttatc ttttctcaag cgagataaat ggtgttttgc accgcttaat aagcgaggga
     2461 ataccgaaaa cggcacggca gaagccgaac cataatagcg gtcggcaatg ccggcattta
     2521 attcgcctaa tgcttggctt tggattcttt ctaatactgc aaataacctg ccgagcaagt
     2581 aagcttggtt atcgctttct ttatttaagc tcataggaac tccttcttta ataaaacctt
     2641 ttctaaattt tcgttgtaag actgctttca tcaacgctac tcgcaaaccg ttaatatcgc
     2701 cgtctgctcg gattcgagtc actaactgtg aaagtaaact catcggatat aaatgaccgc
     2761 taataactgc gcgagccatt tcacccgcca agactggaga aatattctca cttttaccta
     2821 atgaagcggt ttgtaataat agtcgccaaa tggaaggtgg tgttttccat gggcaaggct
     2881 caagagcgag atcttgccaa tgctcgctga ggttttttgc cagttgccca aaggtggtat
     2941 ccagccaaaa acgtaccgaa atgcgagctg catttggagc aagccccaac acataaaaac
     3001 gggtgttttc agataattct ggggaaattt ctgcaagcgg tcgtcctttg ctgatttttt
     3061 gcaattcttc aaagattttt tggttttctt gctcatcatc tggaggcgtc attaaagcag
     3121 caaaaaagcc ttcagcagct tcagcttggg tggtattgtc tgcttctgcc caaaagacag
     3181 tgctggcatc accaatagtt aaacgatgtt tctcggtgcg taacaaataa tttaaagcag
     3241 tagtgtaggc aaaggcggct tgttcagaaa caggggcatt actaccttgt tccttgccaa
     3301 atgaagtgaa ggattcttta ttgaaagaga tgattgaacc accggaactt tgcccaccaa
     3361 ataccccttt aataggagga tgagttcgtt gaattggcga taatttgcct gaaattaagc
     3421 ataaaccttt ttcagcatta tcactttgat ttatcaacaa acttgtccaa agggtttgtg
     3481 cagcttctcg ctgatgaata taaccgcttg tgccgactaa tttaaacacg acattcgcat
     3541 caagaatttc tcttgggcag attgattcgg caaaatgtgt gggttgccat tgttgcagga
     3601 aatttcttat cgccattaaa ccttcatcat tggaatctgc aagcaaatcc aaatggtact
     3661 gtttaaatgc ctcaaaggtt ttctcggcga aattgatggg ttgatctttg gcggtggctt
     3721 tatcaggatt actttcaatg cctagcacat aagcggtttt atcccacaga aaattgggct
     3781 taatgccaga cgtgcgtttt tcagggcgag gtacgctcat caatttcggt tttggtttct
     3841 tatcttctgt taaatttgag atcacattga ccaaatttcc ctttgaatct aattctagta
     3901 cccaaccgat tttttcttca ctgaaaccat aagaaggcac tttagcttcg cctgttaagc
     3961 gatcttcttg tgctgcaagg cggtaataat agcgagttaa ggcggtaata atagcgagtt
     4021 aaggcggaga gaatcatgat ttgacctcct ctgcataaaa tggtggcaca tcaatcacgc
     4081 catttttcat ttccgcacgg aagaaacgag gttgattacc gtgctcaaaa tcaatgtcgt
     4141 gcaacatcca gcctaaatcc cgatctcgct cattttctgc caaaaaacac tcaggtaacg
     4201 gttcatcgtc atcaatcaag gcaaaatttg cggcaaattc acgcacgccc atacaaggct
     4261 gctggaaaca ttgccccttt ttcgcacggc gtttaaacat ttcaatatgc ttggtgacgg
     4321 tttccgcctc gcctgccatt ttggtcagca ctgcgtgagc ttcgatcaca taaccgacat
     4381 ttttcagcac agtagcagca cgttgttggc ggtcgtcttc aatcacagta tataaatccg
     4441 ccactgtttt acgcttcatt gcaccactga ttttactggc agaaatttta ctgcctaact
     4501 cattacggcg aacagactca aattgaatcg gttgtaatac ataaatttta tcaatcaccc
     4561 agcgaattgc cggcttccaa tgcaccgcag ccaaaatccc ccgtgccgca gacggcgtaa
     4621 tcacatcata agacacccgt tctaccttca tttcaggacg ggtaaaacaa gcataatcac
     4681 cccaaatatg gagcctgatt ttgtttggca taatagaatg ctccttttaa ttatgtaaca
     4741 cacacctccc cgaagggagg tgaaatttct ttagcttata ttataactgc tttggtttca
     4801 acccacgcac tcagtaaaat gcgaaaaatt ttatggctta ttatattaag cggtcggatt
     4861 tacttagaaa gttgcaaagt tatttgagta tttaaccgct tgtatttcaa aaatagtcag
     4921 aaaaataaca gcattctagg tacaatattt ttctaagaac gaacttgtct ccgcaatgcc
     4981 tctactgcgt ttgacacagc atttggtttg ggctcctggt ttgcccaatc agaccagaat
     5041 tggcgtgtag cactttctgg ggctatatgc ggtttagcaa gtttgattcg tgtaggtaat
     5101 agaatcgaat cgcctagcaa taacgcttcg cctaaatcaa gtaacggcaa tatatcagta
     5161 attccaacca tagattccgg caataaacgc tttacaacac tttgatcttg accatttgtt
     5221 aatcgtaaaa ccaagaaatt attacattga ctcaaaattg ttcggcttac atctgaagga
     5281 cgttggctaa cgaccaacaa agacacgcca tattttctac cttctttcgc aatccgctca
     5341 aaggcttcca atgcgcgttt ttccgctgct tccgctgaat ctcgaacagg gagatataaa
     5401 tgtgcttcat cgcaaataat cgttagtgga tggcgggaat ctttatccat ccaaaattga
     5461 atgttgtata aaaggcgggc aagaactccc gtaacaatcg gtaaaacatc cgacgggact
     5521 tccgaaaaat caataatttt tatccctttt tcgctctcag aagcagaaaa cagttttgac
     5581 aacatatttt ccagccaccc atagctgttg cactctactg gcggttggaa cataaaaccg
     5641 caacgtctgt catctatttt ggctttcatc cttcccataa acctagacaa cttactatac
     5701 caaggacctt gctttgttcc tgaacctccc tctttaggta ccatctcaga attatcttta
     5761 tctaaacgag ctaacaataa ttcaatagaa tacggaattg gcgaatcaac agtaaacgtt
     5821 tccaaaacat catttctttc ttccttattc aatgtttgct cttttaatgc gcgaacatgc
     5881 tcagtaaaac gcgccgcctg attcggagca ttatcatcac tgcgatctaa aattaaagcc
     5941 agcatttatt cccgattgag cagccaatag ggaataaata aactgcgttc atctgaacca
     6001 tccaaatctc ccggtccagc aatacggtat tgctgagcga tagcgttttt accttcgcat
     6061 agagtgctat attcaccgtg catatcgaat acaataagat tagcagcttt taaagctgct
     6121 gcacgttcca atattaatgc aactgaccag cttttaccgg aaccagtact acccaaaata
     6181 gcagcgtgcc gttgaaagaa tttatctccg tttgctatag ctacagccgt ttcatcagcc
     6241 ataaaatgac ctaaagtcag ccgttcattt tcttttacgt tagcggacaa aagattcata
     6301 aataattgca gattgctgcc actaatatga aagcaatctc tatcaatttg cggaaaacaa
     6361 tccgctcccc gcttaaaagt gttgctcaaa ctaccatcaa cagctttata agtaccgatt
     6421 aatactgcct tgataaagtc atcctgactt tcacccagag gaatttcacc ctcattagat
     6481 atttcttcta gcagcaattt ttcactgata gaacgcgtta cccgttcgat aatgccgata
     6541 aggtactcac tagccgttct gccttgaatc gcaatcagat tacccacagc aatactagtc
     6601 atttgttgat gctcttcaac agaaatcaat acacggctgg tatctactgt tacaaccctg
     6661 cccaaacggg cattgtcttt aaaattcaat gtttcatttg ccattctcta aaatctcttt
     6721 tacaaaaaac tcaacgtccc accaatgaac attaggaata aaagtttctt cttgcttgct
     6781 aaccaccctt gttccagcct tatctccatc aaaaatcaga gccttacaat tcggagcttc
     6841 cttcaccacg tttctggcat tttctgaaag tcctcttgtc agaagtagtg ttttcacacc
     6901 acttttaatt ttgcctgtca aatgtgtttg aaggtggtca tcattaaaac catagccgat
     6961 acataaaatt gaagaagcag aatcaatagc ttcatttgct ttttctcgat gagcatcaaa
     7021 tggttgtcca tagccttttt tatacttccc aacaccaggc gtaataatta aaggctcttc
     7081 cactttacct atacaacttg tcattggaac gtctccagcc ataaaccaat ctaaactacc
     7141 atgcggttta aagattttga tatgatctc
//
LOCUS       DANLXO010000119         7071 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.120, whole genome shotgun sequence.
ACCESSION   DANLXO010000119 DANLXO010000000
VERSION     DANLXO010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7071
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.120"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            151..636
                     /locus_tag="PXD69_002316"
     CDS             151..636
                     /locus_tag="PXD69_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HDL6284463.1"
                     /translation="MKIKTLSLIMLLSVTVNAAPVELHQFDSPKQESDYRALIQELRC
                     PQCQNNNIADSNATIATDMRAKTLELLKQGKSKDEVVDYMIERYGNFVTYDPPLTPAT
                     IMLWLLPLILIALGLGVVLRRKKNKPQAVNFEQNTAKPTTHLAQDEQERLNQILNKEE
                     K"
     gene            633..1544
                     /gene="ccmI"
                     /locus_tag="PXD69_002317"
     CDS             633..1544
                     /gene="ccmI"
                     /locus_tag="PXD69_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HDL6284464.1"
                     /translation="MNFWLAIIFVTLIVCGVAFYPLLKKNKQIDNTKRDSLNKAFYFD
                     RLKEVENEANEGVIDDPEQTKLELQKNLLDDIPHSTQSATSEKLTLGKSWFVALILFV
                     GGISFAIYSNVGSWFSNSMLDTTHQKLDSFYERLKTEETNPLSQEEMNQFAMALRVDL
                     QSNPNDDKKWYMLGQIGMALDDGQLAHDAFSKAAQLKPDNLDYKLSHAQLLLFSEAQE
                     DKKQGETLLKEIIRQDHTNFNALSLLAFHSFEKEDFKMAAMTWGMMLKLLPDEDPSKV
                     TVERSFNMALSNLSEAEKQELQKGEKK"
     gene            1541..2146
                     /gene="mog"
                     /locus_tag="PXD69_002318"
     CDS             1541..2146
                     /gene="mog"
                     /locus_tag="PXD69_002318"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDL6284465.1"
                     /translation="MTACKPLSKEKLKIGLVSVSDRASQGVYSDQGIPELRAWLESAL
                     TEPFELETRLIPDEQAIIEQTLIELVDAHACHLVLTTGGTGPAKRDVTPDATLAVAHR
                     EMPGFGEQMRQVSLHFVPTAILSRQVGVIRHDSLILNLPGQPKAIKETLEGVKDEQGK
                     VLVKGIFSAVPYCLQLLSEIYVETHAAICESFRPKSARREN"
     gene            2156..2494
                     /gene="glnB"
                     /locus_tag="PXD69_002319"
     CDS             2156..2494
                     /gene="glnB"
                     /locus_tag="PXD69_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HDL6284466.1"
                     /translation="MKKIEAIIKPFKLDDVREALTDVGVSGMSITEIKGFGRQKGHTE
                     LYRGAEYAIDFLPKVKVEIVIPDELEEQCIEAIMETAQTGKIGDGKIFVYDVGRVIRI
                     RTGEENEEAI"
     gene            2575..3054
                     /gene="lspA"
                     /locus_tag="PXD69_002320"
     CDS             2575..3054
                     /gene="lspA"
                     /locus_tag="PXD69_002320"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDL6284467.1"
                     /translation="MKTGLKFLWVSLIVIIIDLWSKYIVVQHFEFGESINILPIFNFT
                     YARNYGAAFSFLADHSGWQKYFFLGLAVVISSALVVALWKNQAVKKLENIAYALIIGG
                     AIGNAIDRAYNGYVVDFLHFYWDIYHYPVFNIADIAICVGAGLLILEAFITKKEPKK"
     gene            3065..4009
                     /gene="ispH"
                     /locus_tag="PXD69_002321"
                     /gene_synonym="lytB"
     CDS             3065..4009
                     /gene="ispH"
                     /locus_tag="PXD69_002321"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDL6284468.1"
                     /translation="MKILLANPRGFCAGVDRAISIVELALEIHGAPIYVRHEVVHNKF
                     VVDGLKAKGAIFVEELHEVPDDAIVIFSAHGVSQVVRQEAKNRGLKVFDATCPLVTKV
                     HMQVARASKKGTKAILIGHEGHPEVIGTMGQYNNQEGGIYLVESVEDIANLPVSNNDE
                     LTFMTQTTLSIDDTIGVIEALKEKYPAIQGPRKNDICYATTNRQHAVRELAEQSQLVL
                     VVGSKNSSNSNRLAELASRMGVMSKLIDGPQDIDPTWLEGIETIGITAGASAPEVLVQ
                     SVISHLKTLGVTEVETLVGNEEDVVFEVPKELRIKEVK"
     gene            4009..4257
                     /locus_tag="PXD69_002322"
     CDS             4009..4257
                     /locus_tag="PXD69_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HDL6284469.1"
                     /translation="MTEINRFKLEWACRRGMRELDKMIMPFYQNHFNELNETQQQAFV
                     EMLNYSDPELFRWVMLQAPAPTEEIAELIRLMRDKIET"
     gene            complement(4464..5066)
                     /locus_tag="PXD69_002323"
     CDS             complement(4464..5066)
                     /locus_tag="PXD69_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL6284470.1"
                     /translation="MINFNIWRYTVANHSNHSNHSNHSNHSNQSANQYIFNSDWFTHN
                     VPSLASIFEYVKPRRILEIGSFEGRSSVFFIEEALKYQSQVEIHCIDSWEGGAEHQGV
                     WDMGEIEQRFIHNVTLAQQKFQNVVLYKHRGYSHQKMIELLANGYINYFDYIYIDGSH
                     EAPDVLFDALLAHRLVRKGGVISFDDYLWSPDETGKQRHY"
     gene            5287..5619
                     /locus_tag="PXD69_002324"
     CDS             5287..5619
                     /locus_tag="PXD69_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF413 domain-containing protein"
                     /protein_id="HDL6284471.1"
                     /translation="MADSFSVTRRFFDDKNYPRGFSRHGDYTIRESQTLEQFGQACLA
                     LESGERKPATQEEKRFVAVMKGEEVAETDIEKAWLKYRTLTSKTKRIYTLSGNAGSDA
                     GDDFSAAE"
     gene            5684..6775
                     /gene="trmA"
                     /locus_tag="PXD69_002325"
     CDS             5684..6775
                     /gene="trmA"
                     /locus_tag="PXD69_002325"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDL6284472.1"
                     /translation="MTLPIEQYSDLLAKKTENLTALLKPFNPPAIEVFASKPSHFRMR
                     AEFRVWHEEGELYHIMFNPETKARYRVDSFPIASELINHMMTALLAEIKGNELLTRKL
                     FQIDYLSTLSGEIAVSMLYHKSLNEEWVEQANALKSRLEQQGFKVQIIGRANKQKIAL
                     DCDYVEEILPVHGKNYVYRQVENSFTQPNAEMNIKMLEWARNCTKNSEGDLLELYCGN
                     GNFSIALAENFRKVLATEISKSSVQSAQYNIEKNGIVNLQIIRMSAEEFTQAMNGVRA
                     FYRLKGIDLNAYECNTIFVDPPRAGLDQATLNMVQAYERILYISCNPETLAENLQQLS
                     QTHRIEKAALFDQFPYTHHIESGVWLIRK"
     gene            6867..6956
                     /locus_tag="PXD69_002326"
     tRNA            6867..6956
                     /locus_tag="PXD69_002326"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6901..6903,aa:Ser,seq:tga)
BASE COUNT         2255 a         1409 c         1489 g         1918 t
ORIGIN      
        1 aaactaagat aacactagaa aaaggagata aggttactta ttatatgatc tgtggaaaaa
       61 agctatttga aaacacagaa acttttgtac tggaaattga aaataacaaa tatcaaattc
      121 ctaataaata tatcaacaat attcaaaatt atgaaaataa aaactctcag cctaataatg
      181 cttctaagtg taacagttaa tgctgctccg gtagaactgc accaattcga cagcccgaaa
      241 caagagtcgg actatcgtgc cttaattcaa gaactgcgtt gcccgcagtg tcaaaataat
      301 aatatcgccg attccaatgc gactattgcc accgatatgc gggcaaaaac cttagaattg
      361 ctcaaacaag gcaaaagcaa agacgaagtg gtggattata tgattgaacg ctacggcaat
      421 ttcgtcactt acgacccgcc tctcacaccg gcaaccatta tgttatggct gttgccgtta
      481 attttaattg ccttagggct gggggtggtg ttgcgtagaa agaaaaacaa accacaagcg
      541 gtcaattttg agcaaaatac tgcaaaaccg accactcatc tcgctcaaga tgagcaagaa
      601 cgtcttaacc aaattctcaa taaggaagaa aaatgaattt ctggctggca attattttcg
      661 ttacactgat tgtatgtggc gtggcgtttt atccgttact taaaaagaac aagcaaatcg
      721 ataacaccaa gcgagacagc ttaaacaaag ccttctattt tgaccgctta aaagaagtgg
      781 aaaacgaagc gaatgaaggg gtgattgatg accctgaaca aaccaaatta gagctacaaa
      841 aaaacttgct tgatgatatt ccacacagca cacaaagtgc cacaagtgaa aaattaacgc
      901 tcggcaagtc gtggtttgtg gcattgattt tatttgtcgg cggtatcagc tttgcgattt
      961 acagcaatgt cggttcttgg ttctccaact caatgttaga caccactcac caaaaattag
     1021 acagcttcta tgagcgttta aaaaccgaag agaccaatcc gctctcacaa gaggaaatga
     1081 accaatttgc gatggcatta cgggtagatt tacaaagtaa tccgaatgac gacaaaaaat
     1141 ggtatatgct cggtcaaatc gggatggcgt tagatgatgg tcagcttgca cacgatgcct
     1201 ttagcaaagc ggctcaactc aagccggata acttagatta caaactcagc cacgcccaac
     1261 tgctgctctt ttccgaagca caggaagaca aaaaacaggg tgaaaccttg ttaaaagaga
     1321 ttatccgcca agaccacaca aactttaatg cgttaagttt attggcgttc cactcctttg
     1381 aaaaagaaga tttcaaaatg gcggcaatga cgtggggaat gatgttaaaa ctactgcctg
     1441 atgaagatcc tagcaaagta acggtagaac gcagttttaa tatggcgtta tccaatttaa
     1501 gtgaggcgga aaaacaagaa ttgcaaaaag gtgagaaaaa atgaccgctt gtaaaccact
     1561 tagcaaagag aagttgaaaa tcggcttggt gtcggtttca gaccgagcct cgcagggggt
     1621 ttattcagac caaggcattc ccgaattaag ggcgtggctt gaatctgcct taaccgagcc
     1681 gtttgagctg gaaacccgct taattcccga tgagcaagcc attattgagc aaaccttaat
     1741 cgagttagtc gatgctcacg cttgccattt ggtattaacc accggcggca ccggcccggc
     1801 aaaacgtgat gtcaccccag atgccaccct tgctgtcgcc caccgagaaa tgcccggctt
     1861 tggcgaacag atgcgacaag tgagccttca cttcgtgcca accgccattc tctctcgcca
     1921 agtgggagta attcgccacg acagtctgat tttaaatctg ccggggcaac cgaaagcaat
     1981 taaagaaacg ctggaaggtg tgaaagatga acagggcaaa gtattggtta aaggtatttt
     2041 tagtgccgtg ccatactgtt tacaactttt aagcgaaatt tatgtcgaaa cccacgcagc
     2101 tatttgcgaa agtttcagac ccaaatcggc aagacgagaa aattaaggct aaaaaatgaa
     2161 aaaaatagaa gcaattatta aaccttttaa attagacgat gtgcgtgaag ccttaaccga
     2221 tgtgggtgtc agcggaatga gtattaccga aatcaaaggg tttggcagac aaaaaggaca
     2281 taccgagctt tatcgtgggg cggaatatgc gattgatttt ctaccgaaag tgaaagtcga
     2341 aatcgtgatt cccgacgagt tggaagaaca gtgcattgaa gcaattatgg aaaccgccca
     2401 aaccggcaaa atcggcgatg gcaagatttt tgtgtatgat gtcgggcggg tgatccgcat
     2461 tcgtaccggc gaagaaaatg aagaagcgat ttagttttgc aaaaaatccg gcaaaaacga
     2521 ccgcttgcag ggggatttcc atctactctt tttacattaa attttggata ttaaatgaaa
     2581 acaggcttaa aatttctttg ggtgagttta attgtaatca tcattgacct ttggtcaaaa
     2641 tacattgtag tgcaacattt tgaatttggt gaaagcatta atattttgcc gatttttaac
     2701 ttcacttacg cccgaaacta cggggctgcc tttagtttcc ttgccgacca ttccggctgg
     2761 caaaaatatt tctttttagg gctggcggta gtgatttcca gtgctttagt ggtggctctt
     2821 tggaagaatc aagcggtcaa aaaattagaa aatattgcgt atgccttaat tattggtgga
     2881 gcgattggga atgccattga ccgtgcttac aacggctatg tagttgattt ccttcatttt
     2941 tattgggata tttatcacta ccctgtgttt aatattgccg atattgcgat ttgtgtgggt
     3001 gcaggcttac tgattttaga agcctttata accaaaaaag aaccgaaaaa ataagagtga
     3061 ttaaatgaaa attttattag caaacccacg cggtttttgt gccggcgtgg atcgagccat
     3121 ttcgattgtt gaattagcct tagaaattca cggtgcacct atctatgttc gccacgaagt
     3181 ggtacataac aaatttgtgg tggatggctt gaaagccaaa ggggctattt ttgttgagga
     3241 gctacacgaa gtgccggacg atgctatcgt gatcttctca gcccacgggg tgtcgcaagt
     3301 agttcgccaa gaagccaaaa atcgtggctt aaaagtgttt gatgccactt gcccactcgt
     3361 gaccaaagtg catatgcagg ttgcccgagc cagtaaaaaa gggacaaaag caattttaat
     3421 cggtcacgaa ggtcaccctg aagttatcgg cacaatggga caatacaata accaagaagg
     3481 tggcatttat ttggtagaat cggtggaaga tattgccaac ttgccggttt ccaacaacga
     3541 tgaattaact tttatgacgc aaaccacact ttccattgac gataccattg gcgtgattga
     3601 ggcgttaaaa gagaaatatc cggcaattca aggccctcgc aaaaatgata tttgttatgc
     3661 taccaccaat cgccaacacg cagtgcggga actggcagaa caatcacaat tagtgttagt
     3721 ggtaggttca aaaaactcct cgaactcaaa tcgtttggcg gaactcgcct ctcgaatggg
     3781 tgtgatgtca aaactgattg atggtccgca agatattgat ccaacttggt tggagggtat
     3841 tgaaactatc ggtattaccg ccggtgcttc cgctcctgaa gtgttggtgc aatcagtaat
     3901 ttcgcattta aaaacccttg gcgtaaccga agttgaaacc ttagtcggca acgaagaaga
     3961 cgtggtgttt gaagtcccga aagagttacg catcaaagag gtaaaataat gacagaaatc
     4021 aaccgcttta aattagaatg ggcgtgccga cgtggtatgc gtgagttaga caaaatgatt
     4081 atgccgtttt accaaaatca ttttaatgaa ctcaatgaaa cccaacagca agctttcgtt
     4141 gaaatgctca attacagcga cccggaactg tttcgctggg taatgctgca agcacctgcc
     4201 ccaaccgaag aaatcgctga attgattagg ttaatgcgag ataaaattga gacctagagc
     4261 taatagatta acctcttctt tggggtaaat atatagctac ttaccccaaa gaagactaaa
     4321 ttcattcaac ttttacaaaa taaccctaaa ctagaaaagt taatcttcca atttaataat
     4381 atgttgctga taagctatta aaccttgtat tacatgcact ttctgctgat aggtattgac
     4441 atagtgatca acagcgggtt ttactaataa tgacgctgtt tacctgtctc atctggtgac
     4501 caaaggtaat catcaaaact aataacgcct ccttttctca ctaaacgatg tgcaagtaaa
     4561 gcatcgaaca acacatctgg cgcttcgtga gatccatcta tgtaaatata gtcaaaataa
     4621 tttatatatc catttgcgag aagttcaatc attttttggt gagaatagcc acggtgctta
     4681 tataacacaa cattttggaa tttctgttgc gcaagagtga cattatggat aaatcgttgt
     4741 tctatttctc ccatgtccca aactccttga tgctctgctc ccccttccca actatcaata
     4801 caatgaattt caacttgtga ttgatatttc aatgcttctt caatgaaaaa gacagatgat
     4861 ctaccttcaa atgatccaat ttctaaaatc ctccgaggtt ttacatattc aaaaatagaa
     4921 gctaatgaag gaacattatg agtaaaccaa tcagagttaa aaatatattg gttggctgac
     4981 tggttggaat ggttggaatg gttggaatgg ttggaatggt tggaatggtt ggccacagta
     5041 tatctccaaa tattaaagtt aatcaaaact caatacattt aggtaatata ccttaacaaa
     5101 tataaaaaat atacctcaga ctgcattgtc tattttaaaa ggatcaatat ttctccttaa
     5161 agagtttttt gcaaaaaatt tgccaaattt gaccgctttt ttacattaag gcattgattt
     5221 attcgctgtt tttgtttaat gtatgccgat tttattttcc ctaatttcaa acaacgaggc
     5281 attattatgg cagacagttt cagcgttacg cgccgctttt ttgacgataa aaattatcca
     5341 cgtggtttct ctcgccacgg cgattacacc attcgtgaat cacaaacttt agaacaattc
     5401 ggtcaagctt gcttggcttt agaaagtggt gaacgtaagc cggcaactca agaagaaaaa
     5461 cgtttcgttg cggtaatgaa aggcgaagag gtagcagaaa ctgacattga aaaagcgtgg
     5521 ttaaaatacc gcacattaac tagtaaaaca aaacgcatct acaccctttc aggcaatgca
     5581 ggtagcgatg ccggcgatga cttcagtgct gctgaataat ttctaattta aaaccacgaa
     5641 gtaattcgtg gtttgttttt tcatttgcta tttgtggtaa aaaatgactc ttcctatcga
     5701 acaatattcc gatcttcttg caaaaaaaac cgaaaatttg accgctttac tcaagccgtt
     5761 taacccgcct gcgattgagg tatttgcctc aaagccaagc catttccgta tgcgggcaga
     5821 atttcgagtg tggcacgagg aaggcgagct gtaccacatt atgttcaacc ctgaaaccaa
     5881 agctcgttat cgtgtggata gcttccctat tgccagtgag ctgattaacc atatgatgac
     5941 cgcattattg gcggaaatta aaggcaatga actactgact cgcaagctgt tccagatcga
     6001 ttatttaagc accttaagcg gtgaaattgc agtctcaatg ctttaccaca aaagcctgaa
     6061 tgaagaatgg gttgaacagg caaacgcctt aaaaagccgt ttagagcaac aaggtttcaa
     6121 agtgcaaatt atcgggcgtg ccaataaaca aaaaatcgca ctggattgcg attatgtgga
     6181 agaaattcta ccggtacacg gcaaaaatta tgtgtatcgc caagtggaaa acagctttac
     6241 ccagccgaat gcggaaatga atattaaaat gctggaatgg gcgagaaatt gcacaaaaaa
     6301 tagtgaaggc gatttgcttg agctttactg cggcaacggc aatttttcga ttgccttggc
     6361 ggaaaacttc cgcaaagtgc tggcaaccga gatctcaaaa tcttcagtgc aatcggctca
     6421 atacaatatt gaaaaaaatg gcattgttaa cctacaaatt atccgaatgt cggcagaaga
     6481 atttacccaa gcgatgaacg gtgtgcgagc cttttatcgc ttaaaaggga ttgatttaaa
     6541 cgcctacgaa tgcaatacca tttttgttga tccacctcgt gcagggttag atcaagctac
     6601 attaaatatg gtgcaagcgt atgagcggat tctctatatc tcttgcaatc cggaaaccct
     6661 tgccgagaat ttacaacaat taagccaaac ccatcggatt gaaaaagccg ctctttttga
     6721 ccaattccct tacacccacc atattgaaag tggcgtttgg ttaattagaa aataaattgt
     6781 gctgaaaaaa agaacgaata agcagctttt aagatttatt acttgacgat gttcgcaata
     6841 atctctatta ttgcaacgtt ttcaacggag gaatggcaga gcggttgaat gcaccggtct
     6901 tgaaaaccgg cgagggttaa cgccctccgt gagttcgaat ctcacttcct ccgccagtct
     6961 ttaaacctgt tgagcaatca gcaggttttt ttatttcatt tgcaagaaaa tcagataaaa
     7021 ccaccgcttg aatccatcgc tataaactgg ttgaaatcag cctaaagttg c
//
LOCUS       DANLXO010000120         6694 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.121, whole genome shotgun sequence.
ACCESSION   DANLXO010000120 DANLXO010000000
VERSION     DANLXO010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6694
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.121"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(77..382)
                     /locus_tag="PXD69_002327"
     CDS             complement(77..382)
                     /locus_tag="PXD69_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDL6284473.1"
                     /translation="MRKPAHPGQILLDGFIEPNNIKIKELADHLGFSRETLSRVLHGK
                     TPMTANLALSLEEAGISTAKLWLNLQTKYDLWELKQQRLNPVMPFHFGGNYGETAHA"
     gene            complement(391..666)
                     /locus_tag="PXD69_002328"
     CDS             complement(391..666)
                     /locus_tag="PXD69_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011039853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6284474.1"
                     /translation="MIKSFKHKGLKQYFEKGITKGIQLNHQRKIDGILDLIDSAESID
                     EFMPFYQCHELKGNRKGIYSMTVNGNWRITFEFVNGDAYILNYEDYH"
     gene            958..1188
                     /locus_tag="PXD69_002329"
     CDS             958..1188
                     /locus_tag="PXD69_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284475.1"
                     /translation="MNAQATLNNHKDYILCGRKEKRTSDFINVFEVFENEATQEFVIE
                     RAMFRNGKLIDWNQSDKMNAEQAQQLWQAYIH"
     gene            1570..1806
                     /locus_tag="PXD69_002330"
     CDS             1570..1806
                     /locus_tag="PXD69_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284476.1"
                     /translation="MSNQEFVKLGSVEPSTIDELQKEDIRQAILKSVSITPYYVGLEI
                     AVCQAISAINKFSDGCITEELLDTKNGDKYRKNN"
     gene            2113..2188
                     /locus_tag="PXD69_002331"
     tRNA            2113..2188
                     /locus_tag="PXD69_002331"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2146..2148,aa:Arg,seq:tct)
     gene            2375..2881
                     /locus_tag="PXD69_002332"
     CDS             2375..2881
                     /locus_tag="PXD69_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284477.1"
                     /translation="MKTKYKIIIERAKQQGLTHIELTQKHCLYLATSVGKLCYGVANN
                     AEQHIKLAAGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVDSNEKEQNQNTIRINLFNKCSGILIELNGILKEYELTLDECLDEFLKNKHCL
                     NEFSIHKE"
     gene            2885..3244
                     /locus_tag="PXD69_002333"
     CDS             2885..3244
                     /locus_tag="PXD69_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284478.1"
                     /translation="MTTFSIYTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINDV
                     WVQISRIRKRFKCPEQAKSFVEQWKQIDSPAFMQHQINRQALREELSNLEQRKQKQDG
                     ILEVIEYRISQIKELLK"
     gene            3241..3720
                     /locus_tag="PXD69_002334"
     CDS             3241..3720
                     /locus_tag="PXD69_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284479.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKAVNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYNFEQIEEDPEQVKPKPSKPKRK
                     PFIPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNVLAEMVKRTQEANNAKHA"
     gene            3854..4066
                     /locus_tag="PXD69_002335"
     CDS             3854..4066
                     /locus_tag="PXD69_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284480.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFILAEENIIELLENNGFETIAT
                     ILAGSDGWRNAINAYLAEQNKHRNEF"
     gene            4079..5029
                     /locus_tag="PXD69_002336"
     CDS             4079..5029
                     /locus_tag="PXD69_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284481.1"
                     /translation="MTTANQQFELILKTESRVVSTNLQTFEEQANQYLATLTTTFETD
                     DDFAKAKEEVKELESIEKKIRDAIKQTQTGEIAELVLTAEQIAERFRQERLTRDKLVK
                     SKETEIKKQIADKAIEEITDTRNKLVKVSDISLALEITMPKHGIANRIAEAQKNKRTI
                     DSLTKAVNAEKALIISEMSVEIGRLTERLEQLAAKSAYLFPDAVKLIATQDDLAPIIQ
                     QRLAEEAEREAAIKAKAEADKVQAEAKAITDKMERKQAVENPQNVAKMNIEEPAQTDG
                     PLGDFIITIRLNQTIQTNAVSIARELKAKFGDSVSLNKAK"
     gene            5070..5864
                     /gene="bet"
                     /locus_tag="PXD69_002337"
     CDS             5070..5864
                     /gene="bet"
                     /locus_tag="PXD69_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HDL6284482.1"
                     /translation="MTTALQTLTNKLAERFEMGDGSGLVETLKSSAFAGATVSDAQMI
                     ALLVIANQYQLNPWTKEIYAFPGGNGGLTPIVGVDGWVRIINREPQYDGMEFHFTDDY
                     SACTCTIYRKDRSKPIVVTEFMGECKKSSPAWNSHPKRMLRHKAMIQCARLAFGFTGI
                     YDQDEAERIAENEKPPKNITPQNNVVETTAVELISEEQLSQIRQLMQVTGTEEAKILA
                     YIGVQALNQIPKSQAEAVIKKLNLTLDKQNAEKADNGESVGEEIPL"
     gene            5861..6496
                     /locus_tag="PXD69_002338"
     CDS             5861..6496
                     /locus_tag="PXD69_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDL6284483.1"
                     /translation="MTGDLIILDCEQGSEEWLNARLGIPTATGIENIVTPSGKKSSAW
                     NSYLAELVAESIEGAKDGFKSSDMARGNELEPLARMAYEFETDTEVVQVGGVYLNAEK
                     QLMVSPDGLIPNLKKGLEIKCPKMKTHIKYLLEGGVPNEYLIQVQSALWVTGYETWDF
                     VSYCPEYQKQPLYIYTAERDPVLMKAFDQYIPQFIKSLYALKGVTAPKGAF"
     gene            6509..6685
                     /locus_tag="PXD69_002339"
     CDS             6509..6685
                     /locus_tag="PXD69_002339"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284484.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAICHFRRTAEYSARATHA
                     TAAECYGGIACTST"
BASE COUNT         2327 a         1381 c         1327 g         1659 t
ORIGIN      
        1 aatattcctt gaataaaccg ccctcgtggc ggttttcttt tcctaagaac aataaaatcc
       61 tccgaagagg gcattattaa gcgtgagcag tttctccata atttccacca aaatgaaaag
      121 gcataacagg atttaaccgc tgctgcttta actcccataa atcatattta gtttgtaagt
      181 ttagccataa cttagccgta ctaattcctg cctcttctaa acttaacgct aaatttgcag
      241 tcattggtgt tttgccgtgt aatactcttg ataaagtttc acgagaaaac ccaagatgat
      301 ctgctaattc tttaattttg atgttatttg gttcaataaa tccatctaat aaaatttgcc
      361 ccggatgtgc tggtttacgc ataactcccc ctaatgataa tcttcataat tcaaaatata
      421 agcatcgcca tttacaaatt caaatgtaat ccgccagttg ccattaaccg tcatagaata
      481 aatgcctttt cgatttcctt ttaactcgtg gcattggtaa aaaggcataa attcatcaat
      541 actttctgct gaatcaatca aatctaaaat accatcgatt ttacgttgat gattaagctg
      601 aatacctttt gttattcctt tttcaaaata ttgttttaag cctttatgct tgaagctctt
      661 aatcataata acacctagca aacacaatgt gatacaaata tatcacgcac aataaaaaag
      721 acaatctttt ttaagtgctt tttctcctaa ttgtctttct cttcttatgt taagtgttta
      781 aaaaacaagc aatcaaacaa cctttctaaa aataatttct ctttaaaatc aattatttaa
      841 tcacgaattg aaatttgttt ggctaaaata attacaaatt gaattgactt aatgatttca
      901 atttgtgata ataaacccat caaaacaaac aacgccacag acaaagagga aaccaaaatg
      961 aacgcacaag caacgctaaa taaccacaaa gactacattt tatgcggacg caaagaaaaa
     1021 cgcaccagtg atttcatcaa tgtgtttgag gtctttgaaa atgaagccac gcaagagttt
     1081 gtgattgaaa gagcaatgtt cagaaatggc aagttaatcg actggaacca aagcgacaaa
     1141 atgaacgccg agcaagctca acaactttgg caagcctaca ttcactaaga atttttatca
     1201 aagcccttca cggagggctt gaataaaggt tctaaacctc gccgaaaggc attgttcttt
     1261 aaaaattaaa ccaaaaacac atcacgacaa gcggattact tagcaatgta atgacattgg
     1321 agagacagaa ccaatctttg cataaagcgg taaaacgtat gcggtaaatg aacttatagg
     1381 caagttgtga aactctctaa gctactcgga ctgaaagaat agtacggtag ttgtggcgaa
     1441 tttactggtg atgtgcgaac tagcggaaag gttaagcact ggcagtgaat cgggaagcac
     1501 aaacgctggt tcaattccaa agcatatttg agaaagtgtg ctttggaata ttaataacag
     1561 gagaacaaaa tgagtaatca ggaatttgtt aaattaggca gcgttgaacc ttcaacgatt
     1621 gatgaattac agaaagaaga tattaggcag gcaatattaa aatccgtctc tataacgcca
     1681 tattatgtgg ggctggaaat agcggtttgc caagcaatat cagccatcaa taaatttagt
     1741 gatggctgta ttacagaaga gcttttagat acgaaaaatg gtgataaata ccgaaaaaat
     1801 aactaatcaa taacaccaaa gtgatttcat tttttcggca ttagccctag atgttgccca
     1861 agtattatat tcctcgaagt tgtggcaaac aagaggactt ggcccggtgg ctcacaagta
     1921 taaaaaagag ccaccatctc taacagctct caacagagag tgagacaaat aaccccgttt
     1981 tagttttaat gttttctaaa gtcggcgtta ggcagcgaaa cgaatgtact agagagttgt
     2041 tagagatggt tagtccatca cattccttag attgaagtaa gccctgccgt tggggttaag
     2101 caacggtact ttgaccgcat agttcagtgg atagagcagc tgccttctaa gcagtgggtc
     2161 gagagttcga atctctctgc ggtcgccatc caaaaccgct ttacgcacat catcgatgac
     2221 gagcctacga agtggaaacc taccgtgtag agcggttttg aatggctaag ttgtgtaact
     2281 gctacaactt aaaaagagcg gttgataata aacataatga ctccgtttcc ccgcctcgtg
     2341 cggggctttt tttatccaca taaaaggatt caaaatgaaa actaaataca aaattattat
     2401 tgagcgagca aaacaacagg gtttgaccca tattgagctt actcaaaaac attgtctgta
     2461 tctcgctaca tcagtaggga aactgtgcta cggggtagct aataatgcag aacaacatat
     2521 taaacttgct gctggagaga tttttacact actaacgatc attaaccatc aaatccagtt
     2581 cgatgaagac ttagagcttc acacgtggaa agctagtgga acaaccccac ccgagcaaag
     2641 agcgatacgt atgttacatc atacctcgca atttgcttgg tttgctcctt ggttagtgga
     2701 cagcaatgaa aaagaacaaa accaaaatac aatcaggatt aatttattta acaaatgctc
     2761 tgggattctg attgaactaa atggcattct taaagaatac gagctaactc ttgatgagtg
     2821 cttagatgaa ttcttgaaaa ataagcattg tttgaatgaa tttagtattc acaaggagta
     2881 aaaaatgacg acgtttagta tttataccag tgtatggcac gacagctcca cgaaaggctt
     2941 tcgccacaac attaagcata aacgccacga ttgctggaga gcggatatcc gcataaagca
     3001 aaaaatcaat gatgtgtggg tgcagatttc aaggatacgc aaacgcttca agtgccctga
     3061 acaggcaaaa tcctttgtag aacaatggaa acaaattgat tcacctgcat ttatgcaaca
     3121 ccaaatcaac cgccaagcat taagagaaga attatcaaac cttgagcaac gcaaacagaa
     3181 gcaagacgga atacttgagg tgattgagta tcgtattagc caaatcaagg agttgctgaa
     3241 atgaaacgca ataaagtaga aagctatact atccgcttat taaaaaataa tcatacaaaa
     3301 cgctacttcg gagaagttat attaaacggc ataaaagaaa tcagcacggc agagatgatg
     3361 tctgaaatta acgctattaa ggcagtaaat aagcgcattg aagctctgaa taaaaccaaa
     3421 gccgttaatt tgcctaatta tcctgaaatc cggggtcatc agcctattat gtacaattac
     3481 aattttgaac aaattgagga agatcctgaa caggttaagc ctaaaccatc aaaaccaaaa
     3541 cgcaagccat tcatacctta tgggctaaac ggctactttg tggatagcaa cggtaatatt
     3601 cgcttacatc tagacagacg agcaagtgcc gaaacaatta cccttgaaac tgatttcttc
     3661 aacgttcttg ccgaaatggt aaaacgtaca caagaggcaa acaatgctaa acatgcttag
     3721 acaatggatt aaatacggct tatacgccct gctttttatg gttgccatca ccctcctaat
     3781 gcaatgaaga gcttatccct gaaagcacct gcaagcctga aacttgcgaa tttaaagtaa
     3841 cggagaaagt gtgatgatag gatacgaaga ctacacagat gcttcacttc aaccagaaga
     3901 agaccctagc gaagaggctt tcatcttggc tgaagaaaac atcatcgagc tattagaaaa
     3961 caacggcttt gaaaccattg ccaccatcct agccggttct gatggctggc gtaacgcaat
     4021 caacgcctac ctagccgaac agaacaaaca cagaaatgaa ttttagagga ataagaaaat
     4081 gacaactgca aatcaacaat ttgaacttat tttaaaaacc gaaagccgag tggtttctac
     4141 caacttgcaa acttttgaag agcaagcaaa tcaatacctt gccacgctca ccaccacctt
     4201 tgaaaccgat gatgattttg caaaagcaaa agaagaagtg aaggagcttg aaagcattga
     4261 gaaaaaaatt cgtgacgcaa ttaaacaaac gcaaactggc gagattgcgg aattggtatt
     4321 aacagcagaa caaatcgctg aacgtttccg ccaagagcga ttaacccgag acaagctcgt
     4381 taagagcaaa gaaacggaaa tcaaaaaaca gattgccgat aaagccattg aagaaatcac
     4441 tgataccaga aacaagctgg ttaaagtaag tgatatttcc cttgccttag aaatcacaat
     4501 gccaaaacac ggcattgcta atcgtattgc cgaggcacag aaaaataaac gcacgattga
     4561 cagcttaacc aaagccgtga acgccgaaaa agcgctgatt atcagcgaaa tgtcggtaga
     4621 aatcgggcgc ttgactgagc gattagaaca gcttgctgca aaatcagctt atctttttcc
     4681 tgatgcagtg aaattgatcg caacccaaga cgacctcgcc ccaattattc aacaacgcct
     4741 tgccgaagaa gccgagcgtg aggcggcgat taaagccaaa gcagaagccg acaaagtaca
     4801 agccgaagcc aaagcgatta ctgataaaat ggagcgcaaa caagcggtcg aaaatccgca
     4861 aaatgtggca aaaatgaaca tcgaagaacc ggcacaaacc gatgggccat taggcgattt
     4921 tatcattact attcgcttaa accaaacaat ccaaaccaac gcagtcagta ttgctcgtga
     4981 gctgaaagcg aaatttgggg atagcgtttc gctcaataag gctaaatgat ttgataccgc
     5041 acaaattcaa cctaaataag gatcatatta tgacaactgc attacaaaca ctaaccaaca
     5101 aacttgccga gcgttttgaa atgggagatg gctcaggatt agttgagaca cttaaatcgt
     5161 ctgctttcgc aggggcaacc gtaagcgatg ctcaaatgat tgcactattg gttattgcta
     5221 accaatacca attaaaccct tggacaaaag aaatttatgc attccccggt gggaacggtg
     5281 gattaacgcc tattgtcggc gttgatggtt gggttcgcat tattaaccgt gagcctcaat
     5341 atgatggaat ggaatttcat tttaccgatg actattccgc ctgtacttgt actatctacc
     5401 gtaaagatag aagtaaaccg attgtggtga cggaatttat gggggaatgt aaaaagagct
     5461 ctccagcttg gaactctcac ccaaaaagaa tgttacgcca taaagcaatg atccaatgtg
     5521 caagattagc ctttggcttt acgggtattt acgaccaaga cgaagcagag cgtattgcgg
     5581 aaaatgaaaa accacctaaa aacatcacac cacaaaataa cgtggtagaa accactgccg
     5641 ttgaactcat ttcggaagaa caactgtcgc aaatccggca gttaatgcaa gtaaccggta
     5701 cggaggaggc gaaaattctc gcctatattg gcgttcaagc actgaaccaa atccctaaat
     5761 cgcaggcaga ggcagtgatt aaaaagctca atcttacgct agacaagcaa aacgctgaaa
     5821 aggcggataa tggcgaaagt gtcggtgagg aaatcccact atgacaggcg atttaatcat
     5881 tttagattgc gaacaaggat cagaagaatg gctcaatgcc agattgggca ttcccaccgc
     5941 cacaggcatt gaaaatatcg ttacgccaag cggtaaaaaa tcgtccgctt ggaatagcta
     6001 tcttgccgaa ctggttgccg aaagcattga gggagcaaaa gacggtttta agtcgtctga
     6061 tatggcacga ggcaacgagc ttgaaccgct tgcacgaatg gcttacgagt ttgaaaccga
     6121 caccgaagtc gtgcaagtcg gcggtgtgta ccttaacgcc gaaaaacagt taatggtaag
     6181 tcctgacggc ttaattccca atctaaaaaa agggttggaa atcaaatgcc cgaaaatgaa
     6241 aacccacatc aaatacctgc tagaaggcgg tgtgccgaat gaatatctta ttcaagtgca
     6301 atctgccctt tgggtaacag gctacgaaac gtgggacttt gtcagctact gccccgaata
     6361 ccaaaaacaa ccgctttaca tctacacagc cgaacgtgat ccggtattga tgaaagcctt
     6421 tgatcaatat atcccgcaat ttatcaaatc cctttatgca ttgaaggggg taaccgcccc
     6481 gaaaggggct ttttaatagg tagccaatat gacaacccaa aagaaatacg aactactcca
     6541 aaacgacaca atcaaccaca acggcagaac actctaccgc atcaaagcca tatgccactt
     6601 taggcggacg gctgaatatt ccgcaagagc cactcacgcc acagccgctg aatgctatgg
     6661 tggaattgcc tgtacatcaa cataaccaca aaca
//
LOCUS       DANLXO010000121         6641 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.122, whole genome shotgun sequence.
ACCESSION   DANLXO010000121 DANLXO010000000
VERSION     DANLXO010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6641
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.122"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..1995
                     /locus_tag="PXD69_002340"
     CDS             <1..1995
                     /locus_tag="PXD69_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6284485.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAGSFGRGLMGAGVGIAAGAAMARQPARNQMEFDRQLAMVANTAFSDRDVKGRI
                     DGKRELLDAVQKAVSVGGGSKEEALSSLDALLASGAVSTETALNLLPTLQKGAVATGA
                     SANDMAQIAISSMQQFGIKEEDIGRVLDMAVAAGQAGSFELADMASWLPQQMAAAKQA
                     GLSGIEGFERLLIANQQARVTAGTSNEAGNNLVNLLGKITAKETNERFKNIEYKDPKT
                     GKTKAIDFAKSMEHYKGKGQDSLQAFMSIMDDVVGSDKRYQELQAKLKTAKGEEQKRL
                     FNELTNLVEGTAIGEIISDRQALMALLGIKNNVQLGEKVQKDIQNSEGAVETSHAVIR
                     DTNAHKVESLKNTTEFAQMKNFEKVNGVLGTLAELLNKYANEYPNLTQFLSGATDAVK
                     IFGAALAASSVLDLLTGKKDKGGLIGDVLDKSSKASGGKGKVGKLLSVGGSFASVAGV
                     ATMLHGDQAPMSEERKAELRDPNYQARKMYEYKKEILGSRFHSFFRSNETLEQYRKDV
                     SAYEAKQKNSNTMGAVQGVLSTIPSLQELRPKVDSVTQTLSTYQADFQAFGATISAGI
                     EAGLASQSHTIANQITVELDGSVVAEKVAEYQFNFNKRMA"
     gene            1995..3287
                     /locus_tag="PXD69_002341"
     CDS             1995..3287
                     /locus_tag="PXD69_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HDL6284486.1"
                     /translation="MSGWTMPIQQASFKGVRFDVLAVDDSFERAVVEHAYPFVNGADL
                     EDMGLNTQTIRLQAVFFGSSYYTDYIRLLSVLQQKGADVLVHPIRGRLPNMLLVSANL
                     HTDAENINYVALDLTFKEATEMQPIFAFEDSLISKIDKLLLDLENLFDDGLRFWDSVG
                     VFDLKSRLLGLWGALFASFEAVRNLFDLDKKKYSIASSTSQRTYLRDGSGALNQLKEM
                     VDSGIQGRADLTTLSFKSQLLNITDAIDNTQAIVSKVARDEGFNRSKTVKLLGSDVVE
                     LGIMLDLIATTKLTKVLTELVEEREEELLIGDLELINQIVREHWLNIINKLREQQKNT
                     QKGVPSDKTKVIYETAEKLINNIRNVAHQFTALVLAVINKKPPLTVRMVMDSGTIHKV
                     AHAFYGDYERADELLRLNPHIRQPNFIERGTLLNCYWE"
     gene            3290..4417
                     /locus_tag="PXD69_002342"
     CDS             3290..4417
                     /locus_tag="PXD69_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284487.1"
                     /translation="MENEIVVEIDGSQHKNWKSYDIDSDFLIPADSFNFELGKSSNIE
                     VLPNYSGKTAIVKINGKTVLTGIVDTTHHTISKSGRGFSLNGRDKAAILVDCSAPITN
                     VQGLSLLDAVKKIVTPLGIKEVQLKAEKNPTLSKVDIDVGESAWEAIMRCANSAGLHC
                     WFDPKGVLIVGGADYAQPPVATLYCVKESGDSRKNNFVDATLSYDVSQSYSEVTFLAQ
                     KHGKDSDNAKHDFKWVYKNEEMELYKPKTIVLGDVENLEALMKQAKKQVSDWQLESFN
                     LTIIVPDHKTKDGTLWQAGQRVHVVCEEYDLDGIFFLMGRRFRLSRTGGTTTELRLKL
                     DGVWTPDAYQAKAQEARKRKGKKGRKKKEPVEYVGSWELGK"
     gene            4419..5081
                     /locus_tag="PXD69_002343"
     CDS             4419..5081
                     /locus_tag="PXD69_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL6284488.1"
                     /translation="MMRKLAKQTKEVAKGVQDSVRAAFRGVLNLVKSGSDIQQVQVSA
                     LADETIQDLELMQHFGFTSVPPAGTQAVVIPLGGKTTHGIIVATENGSFRVKNLKNGE
                     TAIYDSSGSTIILKNGRVIDIECDSFNIKCKQYSVTASGGANFNTPKLETDQQFVSQG
                     QISGNGGMVVQGGSGASFTGSLTQQGGSISTDGDVVASGKSLVTHQHNEQGDGRPTSA
                     PI"
     gene            5200..5550
                     /locus_tag="PXD69_002344"
     CDS             5200..5550
                     /locus_tag="PXD69_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HDL6284489.1"
                     /translation="MDREISPLTRDYTSENITTLQNAVYIRLTTPKGSWWADGRVGSL
                     LHLIQREKDLSRVGLLAQQYAEEALQPIIDDGRAKSITVTHEQPKDGSLNLLISVIDN
                     RGVKFEFKHPVKLV"
     gene            5563..6624
                     /locus_tag="PXD69_002345"
     CDS             5563..6624
                     /locus_tag="PXD69_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL6284490.1"
                     /translation="MYQIPTLEDVRREILRDIQSLEPTADIEVDSDYFVRASALASCV
                     VGLYAHQNWIVRQYFPDTADSEYLEMHAKLRNLYRKNATYASGSLKVFGTAGSVINEG
                     LQVKFGERFYVTKSSDVIGDDGSATVRVISMATGASSNVKSESKAQLTAAPAGVSSDC
                     LLLPDVTGGTEVESDAALLARLLEQIRRPPSGGNKNDFRQWAESVDGVTSAFVYPLRR
                     GEGTVDIAITSGDTVPSDEIVRATQAYIDEVRPVTAKSVYVLKPVEKRVNFNIKVQLD
                     TDTTLDGVKAEIENALENYFLSLKPADTLIISQIEAVISDLVGVVDREIVQPTRNQTI
                     DAYREMGWFRLGDVTVELM"
BASE COUNT         1955 a         1228 c         1680 g         1778 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctcgcaa
       61 aatgagctac gccgtgcctc agaagcgact aagcaacgag tccgagagtt aaatgctgaa
      121 ttgggtaaaa ccagttttgg ggataaggca ggaagttttg ggcgtgggtt gatgggtgca
      181 ggggttggaa ttgctgcagg tgcagcaatg gctcgccagc ctgcaagaaa tcaaatggaa
      241 tttgatagac agcttgcaat ggtagcgaat accgcctttt cagatcgtga tgtgaaaggg
      301 cgtattgatg ggaaaagaga gttacttgat gccgtacaga aagcagtaag tgtaggcggt
      361 ggctcaaaag aagaagcgtt gagctcacta gacgctttac ttgcctcagg tgctgtttct
      421 accgaaaccg ctctcaattt actcccaacg ttgcagaaag gtgcggtcgc aacaggggca
      481 agtgcaaatg atatggctca aattgctatt tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg gtcgagtctt agatatggca gttgccgctg ggcaagccgg tagctttgag
      601 cttgcagata tggcaagttg gttgcctcaa caaatggccg ctgcaaaaca agctggctta
      661 agcggcattg agggatttga gcgactttta attgcaaacc aacaggctcg tgtcactgcc
      721 ggtacaagta acgaggctgg taataattta gtgaatctgt tgggtaagat tactgctaaa
      781 gaaactaatg agcgttttaa gaatattgaa tataaagatc cgaaaactgg caaaaccaaa
      841 gcgattgatt ttgcaaaatc tatggagcat tacaagggaa aagggcaaga ttcattgcag
      901 gcttttatgt ctattatgga tgacgttgtc gggagtgata aacgctatca agaactacaa
      961 gctaaactta aaactgctaa aggcgaagag cagaaacgct tattcaatga attaacaaac
     1021 ttagttgaag gtacggcaat tggagaaatt atttctgatc gccaagcatt aatggctcta
     1081 ttagggataa agaataatgt tcaattaggt gaaaaagtac agaaagatat tcagaatagt
     1141 gaaggagctg ttgaaacctc tcacgctgtt attcgggata ctaatgctca taaagttgaa
     1201 tcattaaaaa atacaactga atttgcacaa atgaaaaact ttgaaaaagt aaatggagtg
     1261 ttaggcacat tagctgaatt actgaataaa tacgccaatg aataccctaa cttaactcaa
     1321 tttttaagtg gtgcaacaga tgccgttaaa atttttggag cagctcttgc tgcatcaagt
     1381 gtgcttgatt tattaaccgg taaaaaagac aagggcggac taattggtga tgttttggat
     1441 aaatcatcaa aagctagtgg aggtaaaggt aaggtaggta aattgctttc ggttggtggc
     1501 tcttttgcta gtgttgcagg cgttgccaca atgctacacg gcgaccaagc cccgatgagt
     1561 gaggagcgaa aagcagagtt aagagatcct aattatcaag ctcgtaaaat gtacgagtac
     1621 aaaaaagaga ttttaggtag ccgtttccac tcgttttttc gtagtaatga aacccttgag
     1681 caatatcgga aagatgtgag tgcttatgag gctaagcaaa agaatagcaa tactatggga
     1741 gctgtacaag gggttttaag taccattccg agcttacaag agttacgccc taaagttgat
     1801 tcggttactc aaaccctatc cacctatcaa gccgactttc aggcttttgg ggcaacgatt
     1861 tcagccggta ttgaggcagg gcttgcctcg caatctcata cgattgcaaa tcaaatcacc
     1921 gtggagctgg acggttcggt ggtggctgaa aaagtggctg aatatcagtt taattttaac
     1981 aagaggatgg cgtaatgagc ggttggacaa tgcctattca acaggcgagt tttaaaggtg
     2041 tgcgttttga cgtgcttgca gtggatgata gctttgagcg agcggtagtt gaacacgcct
     2101 acccttttgt aaatggggct gatttagagg atatggggct aaacacccaa actattcggc
     2161 tgcaagcggt cttttttggc tcaagctatt acacggacta tatccgctta ctttcagttt
     2221 tgcagcaaaa aggggctgat gtattagtcc accctattcg tgggcgttta ccgaatatgt
     2281 tactcgtttc ggcgaatcta cataccgatg ccgaaaatat caattatgtt gccttagatt
     2341 tgacctttaa agaggcaacc gaaatgcagc cgatttttgc ctttgaagat tcgctgattt
     2401 cgaaaatcga caagctgcta cttgatctcg aaaacctgtt tgatgatggc ttgcgttttt
     2461 gggatagcgt tggggtgttt gatctgaaat ctcgtttgct tgggctttgg ggggcgttgt
     2521 ttgcctcgtt tgaggcggtg cgtaacctgt ttgacttgga caagaaaaaa tacagcattg
     2581 cctcatcaac ctcacaacgc acctatttaa gagacggttc gggggcattg aatcagttaa
     2641 aagaaatggt ggatagcggt attcaggggc gtgctgattt aacgacactc tcgtttaaat
     2701 ctcagttact caatattact gatgcgatag ataacactca ggcgattgtg agcaaagtgg
     2761 ctagagatga gggttttaac cgctcaaaaa cggttaagtt acttggctct gatgtggttg
     2821 agcttggcat tatgcttgac cttattgcca cgactaagct caccaaagtc ttgactgagc
     2881 tggtagaaga gcgtgaggaa gagctgctaa ttggtgattt agagttaatt aaccaaattg
     2941 tgcgtgagca ttggctgaat attatcaaca aactgcgtga gcaacagaag aacactcaaa
     3001 aaggcgtgcc gagtgataag acaaaagtta tctacgagac cgcagaaaag ctgatcaaca
     3061 atatccgtaa tgttgcccat cagtttactg cacttgtgct tgcggtaatt aataaaaaac
     3121 cgcctttgac cgtgcgaatg gtaatggata gcggcacaat ccataaagta gctcacgcct
     3181 tttatgggga ttatgagcga gcggatgagc tattacgtct taatccgcat attcgccagc
     3241 caaactttat tgagcgaggc acgctgttaa attgttattg ggagtaaaaa tggaaaatga
     3301 aattgtggtg gagattgacg gctcgcagca taaaaactgg aaaagttatg atattgacag
     3361 cgatttttta attcctgctg atagttttaa ttttgagttg ggtaaatcta gcaatataga
     3421 ggttttacct aattattcgg gcaaaacggc aatagttaaa atcaatggca aaacggtgct
     3481 cactggcatt gtggatacca cacatcacac cattagcaaa agcgggcgtg ggtttagcct
     3541 aaatggacgt gataaagccg ctattttggt ggattgctct gccccgatta ccaatgtgca
     3601 agggctctct ttgcttgatg ctgttaaaaa aattgtaacc cctcttggga ttaaagaggt
     3661 gcaactgaaa gccgagaaaa acccgacttt aagcaaggtg gatattgatg tgggtgaatc
     3721 ggcgtgggag gcgattatgc ggtgtgccaa ctcggcaggt ttgcattgtt ggtttgaccc
     3781 caaaggcgtg ttaattgtcg gcggtgcgga ttacgctcaa ccgcccgttg ccacgttata
     3841 ttgcgtgaaa gagtcggggg atagccgtaa aaataacttt gttgatgcaa cactttctta
     3901 tgatgtgtcg caaagctatt cggaggtcac ttttcttgct caaaaacacg gcaaagattc
     3961 tgataatgcc aagcacgatt ttaaatgggt gtataaaaat gaggaaatgg agctttataa
     4021 accgaaaact atcgtgctgg gcgatgtgga gaacctcgaa gccttgatga aacaggcgaa
     4081 aaaacaggta tcagattggc agttggagtc atttaacctc acgattattg tacctgacca
     4141 taaaaccaaa gacggcacgt tgtggcaagc tgggcaacgt gtgcacgtgg tatgtgagga
     4201 gtatgattta gatggtattt tctttttaat ggggcgacgt tttcgactct ctcgcacggg
     4261 tggcacaacc accgaattgc ggttaaaact ggatggcgtg tggacacctg atgcttatca
     4321 agctaaagca caagaggctc gcaagcgtaa aggcaaaaaa ggacgtaaga aaaaagagcc
     4381 tgtagaatat gtaggctcgt gggagttggg aaaataatat gatgagaaaa ttagcaaaac
     4441 agactaaaga ggtggcaaaa ggtgtgcaag atagcgtgcg tgctgctttt agaggggtat
     4501 taaatttagt caagagtggc agtgatattc agcaggtaca ggtgtccgct ttagcggacg
     4561 aaactatcca agatttagag ctaatgcagc attttggttt cacttccgtg ccacctgccg
     4621 gcacgcaagc ggttgttatc cccttaggtg gtaaaaccac gcacggtatt attgtggcga
     4681 ctgaaaacgg ctcgtttagg gttaaaaatc taaaaaatgg tgagacggct atttatgatt
     4741 caagcggctc aactatcata ttaaaaaacg ggcgagtgat tgatattgag tgcgatagct
     4801 ttaacattaa atgcaagcaa tattccgtca ccgcaagcgg tggagcaaat tttaacaccc
     4861 cgaaactaga aaccgaccag cagtttgtgt ctcaagggca gatcagcggc aacggtggaa
     4921 tggtagttca aggcggaagt ggtgcaagtt tcactggctc attaacacaa caaggaggca
     4981 gtatctcaac tgatggtgat gtggtggcat cgggtaaatc actggttaca catcaacaca
     5041 acgaacaagg cgatggcaga cctacctctg ctccaattta acttacaagc taatttacaa
     5101 gcggtctaat tttgcaaatt ttttgtagaa aaagaccgct tgccatttgt ggaagtctct
     5161 ccccgttact cctgtcttta atgtctctac catagcaata tggacagaga aatcagcccg
     5221 ctcactcggg actatacaag tgaaaatata actacactgc aaaatgccgt gtatatcaga
     5281 ctaactactc cgaaaggctc gtggtgggca gatgggcgtg taggttctct gctccatctt
     5341 attcaacgtg agaaagattt aagccgtgtg gggctattag ctcaacagta cgccgaagag
     5401 gctttgcagc cgattattga tgacggacga gccaaaagca ttacggtgac acacgagcag
     5461 ccaaaagacg gctcgttaaa tcttttaatc tccgttattg ataatcgtgg ggttaaattt
     5521 gagtttaaac accctgtaaa actggtttag gtggttttta aaatgtatca aatcccaacg
     5581 cttgaagatg ttagaagaga aattctgcga gatattcaat ctttagagcc aactgctgat
     5641 attgaggtgg attcggatta ttttgttcgt gcctccgctt tggcaagctg tgtggtgggg
     5701 ctgtatgctc accaaaactg gattgttcgt cagtatttcc cagatacggc agactccgaa
     5761 tacctcgaaa tgcacgctaa attgcgaaat ctttaccgta aaaatgcgac ctatgcgagt
     5821 ggttcgttga aagtttttgg tactgctggc tcagtaatca atgagggctt gcaagttaaa
     5881 tttggcgagc gtttttatgt aaccaaaagc tcggacgtta ttggtgatga tggctctgca
     5941 acggtgcgag tgatttcaat ggcaacaggg gcatcaagca atgttaaatc tgaaagtaaa
     6001 gcacaactga ctgctgctcc tgctggcgta tcaagcgatt gcttgttatt gcctgatgtg
     6061 acaggcggga cggaagtgga aagcgatgcg gcattgctgg ctcggttatt agagcagatt
     6121 cgccgaccac cgtcaggcgg gaataaaaat gacttccgcc aatgggcaga aagcgttgat
     6181 ggcgtaacct ctgcgtttgt ttatccatta cggcgtggcg agggtacggt agatattgca
     6241 atcacctcag gtgataccgt gccaagtgat gaaatcgtgc gagcaactca agcttatatt
     6301 gatgaagtcc gccctgttac ggctaaatcg gtttatgtac ttaagccagt tgaaaaacgg
     6361 gtcaatttta acatcaaagt gcaacttgat acggatacga cgcttgatgg tgtaaaagcg
     6421 gaaatcgaaa acgctttaga gaattatttt ttatcactca aacctgctga caccttaatt
     6481 atttcgcaaa ttgaggcagt aattagtgat ttagtgggcg tagtagatcg tgagattgta
     6541 cagccaacca gaaaccaaac gattgatgcc taccgtgaaa tgggctggtt cagattgggt
     6601 gatgtaactg tggagttgat gtgatggtaa cgattaactc t
//
LOCUS       DANLXO010000122         6095 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.124, whole genome shotgun sequence.
ACCESSION   DANLXO010000122 DANLXO010000000
VERSION     DANLXO010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6095
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.124"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            696..965
                     /locus_tag="PXD69_002346"
     CDS             696..965
                     /locus_tag="PXD69_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284491.1"
                     /translation="MKNKNFEIAKVVILNEQLGSPKDLELKVVENSLSDEDRYDIKQA
                     VLKAVGNGCSDPEMLASRCCSAIEIINRNGLNTGNGSISTSSNSV"
     gene            complement(943..1215)
                     /locus_tag="PXD69_002347"
     CDS             complement(943..1215)
                     /locus_tag="PXD69_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas2"
                     /protein_id="HDL6284492.1"
                     /translation="MRNYLISYDLYKAGQNYDGLISYIKSHQVWAAIHKSVWYIKSNK
                     SAEQIRNELLIYLDKNDSVFVTDMNSAAWNNLTEGNGEYIRQNWMR"
     gene            1496..1571
                     /locus_tag="PXD69_002348"
     tRNA            1496..1571
                     /locus_tag="PXD69_002348"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1529..1531,aa:Arg,seq:tct)
     gene            1883..2389
                     /locus_tag="PXD69_002349"
     CDS             1883..2389
                     /locus_tag="PXD69_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284493.1"
                     /translation="MEAKYNMIIELAQQQGLTHIQLTQKHCLHLAASVGKLCSGVVNN
                     AKQKIKTATGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVDSNEKEQNQNTIRINLFNKCSGILIELYGILKEYELTLDECLDEFLKNKHCL
                     NEFSIHKE"
     gene            2393..2752
                     /locus_tag="PXD69_002350"
     CDS             2393..2752
                     /locus_tag="PXD69_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284494.1"
                     /translation="MTTFSIYTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINDV
                     WVQISRIRKRFKCPEQAKSFVEQWKQIDSPAFMQHQINRQALREELSNLEQRKQKQDG
                     ILEVIEYRISQIKELLK"
     gene            2749..3228
                     /locus_tag="PXD69_002351"
     CDS             2749..3228
                     /locus_tag="PXD69_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284495.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKALNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYNFEQIEEDPEQVKPKPSKPKRK
                     PFTPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNALAEMVKRTQEANNPKHA"
     gene            3362..3574
                     /locus_tag="PXD69_002352"
     CDS             3362..3574
                     /locus_tag="PXD69_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284496.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFLLVEEKIIDVLENNGFETVAT
                     ILAGSDGWCNAINAYLAEQNKHRNEF"
     gene            3587..4510
                     /locus_tag="PXD69_002353"
     CDS             3587..4510
                     /locus_tag="PXD69_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDL6284497.1"
                     /translation="MTNQNQQVAQKQDKFPIKTLFESPNVKQKLQELLNKNAATFTTS
                     VLQIVNSNSMLRNAEPMSVFNAACMAATLNLALQNGLGFAYIVPYQNRKEKKTEAQFQ
                     LGYKGLIQLAQRSGQFKRLVAVPVYEKQLLAEDPINGYEFDWKQKPAKDEKPIGYYAY
                     FKLINEFTAEIYMTTQEVHDHANRYSQTYRKGYGVWHDNFEAMALKTVMKLLLSKQAP
                     LSVEMQQAVLADQAVVKDVENAEFAYPDNEIQEAEFTELKVSDEVFEKCKQTIINKES
                     TLQDMCDNGYEFNKEQYAELEKLENEQQSNV"
     gene            4503..5165
                     /locus_tag="PXD69_002354"
     CDS             4503..5165
                     /locus_tag="PXD69_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation protein TolB precursor"
                     /protein_id="HDL6284498.1"
                     /translation="MYKFKPRCSMLHQLMSEPRTKADREAGLISDTAKAAVREVAKFD
                     LFGYQSFDGNKYTEKGNQLEEQAIKLSGFTRGLVLKKNTERRENDWISGECDIYVPSR
                     KLIIDTKCSWDIGTHPFFADEAIAKAEKAGYDIQMQGYMWLWDCEEAQIDFVLFPTPI
                     DLIGTYESTEKLIDLVEQIPQQKRITTVTVKRDEAIIAKIKDRVKAASKYYDKLIQEA
                     MN"
     gene            5206..5907
                     /locus_tag="PXD69_002355"
     CDS             5206..5907
                     /locus_tag="PXD69_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDL6284499.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAITTFGTVFAGTLGGYIE
                     KESNLKHLGNAWVYDNAKVYDSAEVYGNAKVYDSAEVYGNAEVWGSAEVYGNAKVWGN
                     AEVWGSAEVYGNAEVWGSAKVWGNAEVWGSAEVYGNAKVYDSAEVWGSAKVRSFAVLS
                     ERKMIFWASNVGTENGTLTVYNGKDGLLVTRGCFTGTVEEFLAKSDEVHDEKTKREYQ
                     LLIEVAKSRILGEAT"
     gene            5935..>6095
                     /locus_tag="PXD69_002356"
     CDS             5935..>6095
                     /locus_tag="PXD69_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL6284500.1"
                     /translation="MKPFDLNKALAGEPVKLRNNDKAFVKYLISDDYIRDNKDHQVQG
                     YTVDEENVF"
BASE COUNT         2128 a         1230 c         1262 g         1475 t
ORIGIN      
        1 gataatgtcg aacaacgact agacaatgtt gagcagcgac taggcaatat ggataagaaa
       61 atagatggga ttgataataa actcgatctg ttactacaac aattcaaaag ataaaataat
      121 attccttgaa taaaccgcca ggagggcggt tttctcttgc ctaaaatctg caaaattctc
      181 ttcaaaaacg accgcttgca actcaatctg tttatttatt aagcaatcaa acaacctttc
      241 taaaaataaa ttccttttaa aatcaacaaa ttaccttttt gttatttatt tttaccttat
      301 ttaacatacc ttttggtatt tacaacaata tttaccataa ggtataatgc acccatcaaa
      361 acgagctacg gctcaatgct ctttaaaaat caaattcaaa accgctttaa gcctaatggt
      421 gaaaagtagg aagacgaaag tcggaggcag cccttaaaac gcccactact tcaaagcgtt
      481 atgccctttg gtgcaagcaa aggaatacaa gcatataccc ttatagcggt ttaggtgaaa
      541 gtctgggcgt gtacattgag acacaaggga gtaaccgaaa ttcaaattgt gcaaacgcag
      601 ctctaaaatt gcgtgacagc tcggagagac ggcatttcaa attccaaagc atatttgaga
      661 aagtgtgttt tggaatattt aactagaggt aaattatgaa aaacaaaaat tttgaaattg
      721 cgaaagttgt tattttaaat gaacaactag gaagccctaa agatttggaa ttaaaagtag
      781 tagagaatag cctatctgat gaagatagat acgacatcaa acaggcggta cttaaggctg
      841 tagggaatgg ttgttcagat ccagaaatgc ttgcatcacg atgttgttcc gcaatcgaaa
      901 taattaatag aaatgggcta aacactggta atgggagtat atctacctca tccaattctg
      961 tctaatgtat tcaccatttc cttcagtcag attattccaa gcagcactat tcatatccgt
     1021 aacaaagaca ctatcgttct tatctaaata aatgagcagt tcattacgaa tttgttctgc
     1081 agatttatta gatttgatat accaaactga tttatgaata gcagcccaaa cttgatggct
     1141 tttaatataa ctaatcaatc catcgtaatt ttgcccagct ttgtataaat cgtaagaaat
     1201 taaatagttt ctcatagaag aatccttatt tgtgctgtga gagatttaat tatattcctt
     1261 agtgttgtga gagacaataa ggaaacttga cggctcacaa gtataaaaga gccaccatct
     1321 caaaccgctc tcaacaaaga gttagcccga taacctcact tggttttttg cgtatgtttt
     1381 cccaaagtgc cgttatccag cgaaacgaat ggactagaga gcggtttgag atggtgaaag
     1441 ccatcctcct tagattgaag taaaccctgc cgttggggtt aagcaacggt actttgaccg
     1501 catagttcag tggatagagc agctgccttc taagcagtgg gtcgagagtt cgaatctctc
     1561 tgcggtcgcc atccaaaacc gctttgcgca catcatcgat gacgagccta cgaagtggaa
     1621 acctaccgtg tagagcggtt ttgaatggct aataaaacaa tgtgaggtat caaatgctta
     1681 ttaagttaaa aagccctgaa caagcagggc aagaagaaat ctgggaagtt agcgatgatt
     1741 ggattgctcc tcaagaatta aatccgccat cagaaacatc tccttaatat aacgcctgta
     1801 gagttgctca aggttaagta attactgcgg aggggctttt tacacccaaa attcagattt
     1861 ttgactaaaa aaggaacgaa aaatggaagc taaatacaac atgattattg agctggcaca
     1921 acaacaaggc ttaacccata ttcaacttac tcaaaaacac tgtcttcatc ttgctgcatc
     1981 agtggggaaa ctatgttctg gagtcgttaa taatgcgaaa cagaagatta aaacggctac
     2041 gggagaaatt tttacattac tcaccatcat taaccatcaa atccagttcg atgaagactt
     2101 agagcttcac acgtggaaag ctagtggaac aaccccaccc gagcaaagag cgatacgtat
     2161 gttacatcat acctcgcaat ttgcttggtt tgctccttgg ttagtggaca gcaatgaaaa
     2221 agaacaaaac caaaatacaa tcaggattaa tttatttaac aaatgctctg ggattctgat
     2281 tgaactatat ggcattctta aagaatacga gctaactctt gatgagtgct tagatgaatt
     2341 cttgaaaaat aagcattgtt tgaatgaatt tagtattcac aaggagtaaa aaatgacgac
     2401 gtttagtatt tataccagtg tatggcacga cagctccacg aaaggctttc gccacaacat
     2461 taagcataaa cgccacgatt gctggagagc ggatatccgc ataaagcaaa aaatcaatga
     2521 tgtgtgggtg cagatttcaa gaatacgcaa acgcttcaag tgccctgaac aggcaaaatc
     2581 ctttgtagaa caatggaaac aaattgattc ccctgcattt atgcaacacc aaatcaaccg
     2641 ccaagcatta agagaagaat tatcaaacct tgagcaacgc aaacagaagc aagacggaat
     2701 acttgaggtg attgagtatc gtattagcca aatcaaggag ttactgaaat gaaacgcaat
     2761 aaagtagaaa gctatactat ccgcttatta aaaaataatc atacaaaacg ctacttcgga
     2821 gaagttatat taaacggcat aaaagaaatc agcacggcag agatgatgtc tgaaattaac
     2881 gctattaagg cattaaataa gcgtattgaa gctctgaata aaaccaaagc cgttaatttg
     2941 cctaattatc ctgaaatcag aggtcatcag cctattatgt acaattacaa ttttgaacaa
     3001 attgaggaag atcctgaaca ggttaagcct aaaccatcaa aaccaaaacg caaacctttc
     3061 acaccctacg ggctaaacgg ctactttgtg gatagcaacg gcaatattcg cctgcaccta
     3121 gacagacgag caagtgccga aacaattacc cttgaaactg atttcttcaa cgctcttgcc
     3181 gaaatggtaa aacgtacaca agaggcaaac aatcctaaac atgcttagac aatggattac
     3241 atacggctta tacgccctgc tttttatggt tgccatcacc ctcctaatgc aatgaagagc
     3301 ttatccctga aagcacctgc aagcctgaaa cttgcgaatt taaagtaacg gagaaagtgt
     3361 gatgatagga tacgaagact acacagatgc ttcacttcaa ccagaagaag accctagcga
     3421 agaggctttc ctcttagtgg aggagaaaat tatagatgtg ctagaaaaca acggctttga
     3481 aaccgttgct actatcctag ccggttctga tggctggtgt aacgcaatta atgcctacct
     3541 ggccgaacag aacaaacaca gaaatgaatt ttagaggaat aagataatga caaaccaaaa
     3601 tcaacaagta gcacaaaagc aagataaatt cccgattaaa accctatttg aaagcccgaa
     3661 tgtaaagcaa aaactacaag agcttttaaa caaaaacgca gccacgttta caacaagcgt
     3721 gttgcagatt gtgaatagta actcaatgtt acgcaatgcc gaaccgatga gcgtattcaa
     3781 cgccgcttgt atggcagcaa cgcttaattt ggcattacaa aacggcttag gttttgccta
     3841 cattgtgccg taccaaaacc gcaaagagaa aaaaaccgaa gctcaattcc aacttggcta
     3901 caaaggttta attcaactgg ctcaacgtag cgggcaattt aaacgccttg ttgccgtgcc
     3961 ggtgtatgaa aaacaactgc ttgccgaaga ccccatcaac ggttacgagt tcgattggaa
     4021 acaaaaaccg gctaaagatg aaaaaccgat tggctattac gcttatttca aactgataaa
     4081 tgaatttacc gccgaaatct atatgaccac gcaagaagtc cacgaccacg ccaaccgcta
     4141 cagccaaacc taccgcaaag gctacggcgt atggcacgac aactttgagg caatggctct
     4201 caaaactgtg atgaagctct tgctttccaa acaagctcca ttatcagtgg aaatgcaaca
     4261 agcggtcttg gcagatcaag cggtcgtaaa agatgttgaa aatgcagaat ttgcctaccc
     4321 tgacaacgaa atccaagagg cggaatttac cgaactcaag gtcagcgatg aggtgtttga
     4381 gaaatgcaaa caaaccatca tcaacaaaga aagcaccttg caagatatgt gcgataacgg
     4441 ctacgagttc aacaaagagc aatatgcgga gttggagaag ttagaaaatg aacagcaatc
     4501 aaatgtataa attcaaaccc cgttgctcaa tgctccacca actaatgagc gaacctcgca
     4561 ccaaagccga ccgtgaagcc ggactgattt ccgacaccgc aaaagcagcg gtgcgtgaag
     4621 tggctaaatt tgacctattc ggttatcaat cctttgacgg caacaaatac actgaaaaag
     4681 gcaatcagct agaagaacaa gccattaagt taagcggttt tactcgtggc ctggttctaa
     4741 aaaagaacac cgaacgccga gaaaacgatt ggatttcagg cgagtgtgat atttatgtac
     4801 caagccgaaa gctgattatc gatacaaaat gcagttggga catcggcacg cacccgtttt
     4861 ttgcagacga agccatcgcc aaagccgaaa aagccggata tgacattcaa atgcaaggct
     4921 atatgtggct gtgggattgc gaagaggctc aaatcgattt tgtgttattc cctactccaa
     4981 tcgaccttat cggtacttac gaaagcacag aaaagctgat tgaccttgtg gaacaaatcc
     5041 cccaacaaaa acgcattacc accgtgacgg ttaagcgtga tgaagccatc attgccaaaa
     5101 tcaaagacag agtgaaagca gccagtaagt attacgacaa gcttatacaa gaagctatga
     5161 attaattcaa tcgccccgaa aggggctttt taataggtga caaatatgac aacccaaaag
     5221 aaatacgaac tcctccaaaa cgacacaatc aaccacaacg gcagaacact ctaccgcatc
     5281 aaagccataa ccacatttgg aacagtcttt gcaggtacac ttggcggcta tattgaaaaa
     5341 gagagcaacc taaaacattt aggaaatgct tgggtgtatg acaacgccaa agtgtatgac
     5401 agcgccgaag tgtatggcaa cgccaaagtg tatgacagcg ccgaagtgta tggcaacgcc
     5461 gaagtgtggg gcagcgccga agtgtatggc aacgccaaag tgtggggcaa cgccgaagtg
     5521 tggggcagcg ccgaagtgta tggcaacgcc gaagtgtggg gcagcgccaa agtgtggggc
     5581 aacgccgaag tgtggggcag cgccgaagtg tatggcaacg ccaaagtgta tgacagcgcc
     5641 gaagtgtggg gcagcgccaa agtaagatca tttgcagttc tttctgaaag aaaaatgatt
     5701 ttctgggcga gcaatgtcgg cacagagaac ggtacattaa ccgtttacaa cggaaaagac
     5761 ggactgcttg taacaagagg ctgtttcacc ggcacagtcg aagagttttt agcaaaatcc
     5821 gacgaagttc acgatgagaa aacgaagcgg gaatatcagc tactgattga ggtagcaaaa
     5881 agcagaattt taggagaagc gacttaatca gtctcttttt tattggagaa taaaatgaaa
     5941 ccatttgatt taaataaagc attggcaggt gagccagtaa aactaagaaa taatgataag
     6001 gcatttgtaa aatacctaat tagtgatgac tatattagag ataataaaga ccaccaagta
     6061 caagggtata cagttgatga agaaaatgta ttttt
//
LOCUS       DANLXO010000123         6060 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.125, whole genome shotgun sequence.
ACCESSION   DANLXO010000123 DANLXO010000000
VERSION     DANLXO010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6060
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.125"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            79..1068
                     /gene="dusB"
                     /locus_tag="PXD69_002357"
     CDS             79..1068
                     /gene="dusB"
                     /locus_tag="PXD69_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDL6284501.1"
                     /translation="MQIGQYAIKNRIFLAPMAGITDQPFRRLCSQLGAGLTFSEMMST
                     NPDVWHTEKSRLRLAHHDEIGLNAVQIAGSDPVEMAKAAKINVEYGADIIDINMGCPA
                     KKVNKNMAGSALLRNPKLVAQILDSVVNAVDVPVTLKIRTGWDQENRNCLQIAKIAEQ
                     AGIKALTIHGRTRSCLFNGEAEYESIKAVKEAISIPVIANGDIDSAEKAKFVLDYTKA
                     DAIMIGRASFGNPWIFKEINDFFETGLSSPLSIDKKYQLMFKHIEDLHQFYGEEKGYR
                     IARKHVGWYTEKLNPESNFKRTFNTLSSTKEQLYALEDFVKSIHLESQLRKVG"
     gene            1073..1369
                     /gene="fis"
                     /locus_tag="PXD69_002358"
     CDS             1073..1369
                     /gene="fis"
                     /locus_tag="PXD69_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HDL6284502.1"
                     /translation="MLEQQPTQNPLTVTMLNAQAQQVNKPLRDNVKAALKNYLSQLNG
                     EDPTELYELVLSEIEHPMLDMVMQYTRGNQTRAATMLGINRGTLRKKLKKYGMG"
     gene            complement(1474..4260)
                     /locus_tag="PXD69_002359"
     CDS             complement(1474..4260)
                     /locus_tag="PXD69_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin family TonB-dependent
                     receptor"
                     /protein_id="HDL6284503.1"
                     /translation="MKYHHFRYSPVALTVLFALSHSYGAATENKKIEENNDLAVLDEV
                     IVTESHYAHERQNEVTGLGKVVKNYHEMSKNQILGIRDLTRYDPGISVVEQGRGASSG
                     YAIRGVDKNRVSLLVDGLPQAQHYHTLGSDANGGAINEIEYENIRSIELSKGASSAEY
                     GSGALGGAIGFRTKDAQDIIKEGQHWGLDSKTSYASKNSHFLQSIAAAGEAGGFEALV
                     IATHRHGKETKIHSEANKLKHNIRRITGFENRYDLYPNSAQNAPGGSFFIVEDTCPTL
                     DCTPRARVKLNRDNFPVRTFPEYTPEERKQLEQIPYRTEQLSAQEYTGKDRIAPNPLD
                     YKSNSVFMKFGYHFNSSHYLGAILEDTKQRYDIRDMQTPAYYTKDDINLSLRNYVYEG
                     DNILDGLVFKPRIPYGLRYSHVKFFDERHHKRRLGFTYKYKPENNRWLDSIKLSADKQ
                     DIELYSRLHRLHCSDYPVVDKNCRPTLDKSWSMYRTERNNYQEKHRVIHLEFDKALNA
                     GQGVFKQTHKLNLGLGFDRFNSLMDHGDMTAQYTKGGYTSYRGRGRLDNPYIYRRDPR
                     SIETVSLCNNTRGDILNCEPRKIKGDSHFVSFRDLVISEYVDLGLGVRFDQHRFKSDD
                     PWTLSRTYRNWSWNGGITLKPTEFVSLSYRISNGFRVPAFYELYGKRDHIGLKDNEYV
                     QRAQRSHQLEPEKSTNHEIGVSFKGQFGYLDVSYFRNNYKNMIATACKRIIQKSHCFY
                     NYHNIQDVALNGINLVAKFDLHGILSMLPDGFYSSVAYNRVKVKERKLTDSRLDSVND
                     PILDAIQPARYVLGFGYDHPEEKWGIGITTTYSKAKNADEVAGTRHHGIHRVDLGGKL
                     TGSWYTHDITGYINYKNYTLRGGIYNVTNRKYSTWESVRQSGVNAVNQDRGSNYTRFA
                     APGRNFSLAFEMKF"
     gene            complement(4354..>6060)
                     /locus_tag="PXD69_002360"
     CDS             complement(4354..>6060)
                     /locus_tag="PXD69_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL6284504.1"
                     /translation="LAACSSNGGSFDVQSAKVESQTQTTPKKPSLQDDNSNARRTVSA
                     SETEALLQPGFGFSAKIPRRNLFPQGKEDVAPIGDIKEITGDLTKIPYEEEVKAYGSS
                     ADGFSHTHDRNHKLYTRDFNFVRSGYVLHSGAKPEIKPKEILRTGAHGYVYYLGIEPA
                     KAIPTQKATYKGYWDFTTDARKGRDSKYFSNSAGINIGATPENSYDINVDDSEKPMGH
                     TGEFTADFANKTLTGTLVRNGYVSRSKEQKITTIYDIDAKIKGNRFSGKANAKNTDDP
                     YFGKSSTTLEGGFFGGKAQELAGKFLADDKSVFVVFAGKRDAKKDDSESAFDAFKIKL
                     KDLNKSEMDTFGNATHLIINNKQIPLIAEGKKSFAEMKFYDLVTRTIDDKTYRVSVCC
                     NNLDYVKFGTYSEGNNSDTAHQYLVGERTAVADLPTGTVKYRGTWDGVMYSKSGSAGA
                     ESPSNSESGTRSLFDVDFVNKKINGKLIANDGVEERPMLTLEGNLKGNGFAGTAKTGN
                     SGFNLDPKSTNGGTVVHINTQFEGGFYGPKATELGGIVHSAETDKDRVSITFGGKRQI
                     EK"
BASE COUNT         1836 a         1264 c         1076 g         1884 t
ORIGIN      
        1 gtacggtatt taccgtactt tttatttgga tatccctctg gttaaaatta cttcaaattt
       61 gttaataaaa ggttaaaaat gcaaatagga caatatgcaa tcaaaaatcg tattttcctt
      121 gcacctatgg ctggaatcac agatcagcct tttcgccgct tatgtagcca acttggagca
      181 ggtttaacat tttcagagat gatgtctacc aatcctgatg tatggcatac tgagaaatca
      241 cgattgcggt tagcacacca cgatgaaata ggcttaaatg ccgtacaaat tgcaggttct
      301 gatcctgttg aaatggcaaa ggctgcaaag ataaatgttg agtatggtgc cgatattatt
      361 gatattaata tgggttgccc ggcaaaaaag gtgaataaaa atatggcagg ctctgctctt
      421 ttacgtaacc ccaaattagt cgctcaaata ttagattctg tagtcaatgc cgttgatgtc
      481 cctgtgacac taaaaattag aacaggttgg gatcaggaaa atagaaattg tctgcaaatt
      541 gcgaaaattg cagaacaagc cggcataaaa gctctcacta ttcacgggcg tactcgaagc
      601 tgtttattta atggcgaagc tgaatatgaa agtattaagg cagtaaaaga agcaatttct
      661 atcccagtga tagcaaacgg agacattgac tctgcggaaa aagcaaagtt tgttctcgac
      721 tataccaaag ccgatgcaat catgattggg cgcgctagct ttggaaatcc ttggatattt
      781 aaggaaatta atgatttttt tgaaactgga ttatcttcac cattatcaat tgataaaaaa
      841 taccaattaa tgtttaaaca tattgaggat ttgcaccaat tttatggtga agaaaaaggt
      901 tatcgtattg cacgaaaaca tgttggttgg tataccgaaa aattaaatcc ggaatcaaat
      961 tttaaacgca cttttaatac actaagttcc acaaaagagc aactttatgc attagaagat
     1021 tttgttaaat cgattcattt agaatctcaa ttaagaaaag ttggataaaa aaatgttaga
     1081 gcaacaacct acacaaaacc cattaacagt aacaatgtta aatgcacaag cgcagcaggt
     1141 taataaacca cttcgcgata atgtgaaagc agcattaaaa aactatttat ctcaattaaa
     1201 tggtgaagat ccaacagaat tatacgaatt agtattatct gaaatcgaac acccaatgtt
     1261 agatatggtg atgcaatata ctcgcggcaa tcaaactcgt gcagcaacaa tgctaggcat
     1321 taaccgtggc acattacgca aaaaattaaa aaaatacggt atgggttaat ctaaccgacc
     1381 gttaaaacac gattttaatt cgtatgtaat tagttagagc caacaaaaaa cgctgaatat
     1441 actattcagc gtttttctat tttattttgc cgtctaaaac ttcatttcaa atgctaaact
     1501 gaaatttctc cccggagcgg caaatcgagt gtaattgcta ccccggtctt ggtttactgc
     1561 attcacaccg gattggcgca ctgattccca agtggaatat ttacgattag tcacattata
     1621 aattcctcca cgtaaggtgt agtttttata attgatgtaa ccggtaatat catgggtgta
     1681 ccaagaaccg gtcagtttgc cacctaaatc aacgcgatgt atgccgtgat gacgtgtgcc
     1741 tgccacctca tcggcgtttt tggctttaga ataggtggta gtaatgccaa ttccccattt
     1801 ttcttctggg tgatcgtagc cgaatccaag cacatagcgt gctggctgaa tcgcatctag
     1861 aataggatcg tttacgctat cgagtcttga gtcggttagt ttccgctctt ttacttttac
     1921 acggttataa gcaactgatg aataaaaacc atctggcagc atagataaaa taccgtgtaa
     1981 gtcaaattta gcgactaaat ttatcccgtt tagtgctaca tcttgaatat tatggtagtt
     2041 atagaaacag tgtgattttt gtattattct tttacatgct gtcgcaatca tatttttata
     2101 gttattacgg aaatagctca catcaaggta accaaattga cctttaaagc taactccaat
     2161 ctcatgatta gtcgattttt ctggctctaa ctggtggcta cgttgcgcgc gttgcacata
     2221 ttcgttatct ttaagcccaa tatgatcacg tttaccataa agttcataga atgcaggcac
     2281 tctaaaaccg tttgaaatgc gataagaaag cgatacaaac tctgttggtt taagcgtaat
     2341 cccaccattc caagaccaat ttcgataagt tcggctaagt gtccacggat catcagattt
     2401 aaatcgatgt tgatcaaaac gcacccctaa tcccaaatcc acatactcgc ttatcactag
     2461 atcgcggaag ctaacaaaat ggctatcgcc tttaatttta cgcggttcac agtttaagat
     2521 gtcgccgcgt gtattattac acaaagatac cgtttcaata ctgcgtggat cgcggcgata
     2581 aatatatgga ttatctaaac gccctctacc gcggtagctg gtataaccgc ctttggtata
     2641 ttgggcagtc atatccccat gatccataag cgaattaaat cgatcaaagc ccaaccctaa
     2701 attcagtttg tgggtttgct taaatacgcc ttgaccagca tttagcgctt tatcaaattc
     2761 taaatgaatg acacgatgct tttcttggta attattacgc tcagttcgat acatagacca
     2821 agatttatcc aaagtcgggc ggcaattttt atctaccaca ggataatcgc tacaatgcaa
     2881 gcgatgtagc cggctatata gttcaatatc ttgtttatcc gcactgagtt taatgctatc
     2941 caaccagcga ttattctctg gtttatattt ataggtgaat cctaaacgac gtttgtggtg
     3001 acgttcatca aaaaacttca catggctata gcgcaaccca taagggatcc ttggcttgaa
     3061 cactaagcca tctaaaatat tatccccttc ataaacatag ttcctaagtg ataagttaat
     3121 atcgtctttt gtatagtaag ctggcgtttg catatcacgg atatcgtagc gttgttttgt
     3181 atcttctaag attgcgccaa gataatgaga cgagttaaag tgatagccaa acttcataaa
     3241 aacagaatta ctcttgtaat ctaaagggtt tggtgcaatg cgatctttac cggtatattc
     3301 ttgggctgag agctgctcag tgcgataagg aatctgctca agctgtttgc gctcttcagg
     3361 cgtatattcc ggaaatgttc tcactgggaa attatcgcgg ttcaacttaa cccttgcacg
     3421 aggagtacaa tctaatgttg ggcaagtatc ttccacaata aaaaaagatc ctccaggagc
     3481 attctgtgcg gaatttgggt aaagatcgta gcgattttca aagccggtta tacgccgaat
     3541 attatgtttt aatttatttg cctcggaatg aattttggtc tctttaccgt gtcggtgagt
     3601 tgcaataaca agtgcttcaa aaccacccgc ctcaccagcc gctgcgatag actgtaaaaa
     3661 atggctattt ttgctggcat aagaggtctt actatctaag ccccaatgct gcccctcttt
     3721 aataatatcc tgcgcatctt tagtacgaaa accaatagca ccacctagcg caccagagcc
     3781 atattccgca gaacttgctc ctttgcttaa ctcaattgaa cgaatgtttt catactcaat
     3841 ctcattaatt gcaccaccat tagcatctga acctagcgta tgataatgct gcgcttgtgg
     3901 tagcccatca acaagtaagc tgacacggtt tttatctaca cctcgaatgg catagccact
     3961 acttgcaccg cgaccttgtt ccaccaccga aataccaggg tcatagcgag ttaaatcacg
     4021 aataccaaga atttgatttt tactcatttc gtgataattt ttcactactt tccccaagcc
     4081 agttacttcg ttttgacgtt cgtgagcata atggctctct gtcacaataa cttcatccag
     4141 aacagctaga tcgttatttt cttctatttt tttattttca gtcgcagcac cgtatgaatg
     4201 agaaagagca aataacactg ttaaggcaac aggtgaatag cgaaaatgat gatatttcat
     4261 tatcattaga tagggtctcc tttatttaaa ttttgcaaat ttttataaaa aattgcccgc
     4321 ttgctatcta caaccagcaa aggggaatta tgattatttt tctatttgac gttttccgcc
     4381 gaatgtaata ctgactctat ctttatccgt ttctgcacta tgtacaatac cacctaattc
     4441 cgtcgcctta gggccataaa agcccccttc aaattgagta tttatatgca ctaccgtgcc
     4501 accattcgta cttttcggat caagattaaa accagaattg cccgttttgg ctgtgcctgc
     4561 aaaaccattc cctttcagat tgccttcaag tgtcagcatt gggcgttctt caacaccatc
     4621 attagcaatc agcttgccat taattttttt attgacaaaa tctacatcga atagtgaacg
     4681 agtaccactt tcgctgttac ttggcgattc agcccctgcc gagccagatt tactgtacat
     4741 taccccgtcc caagtacctc gatattttac tgtccctgtt ggcaaatctg ccacagctgt
     4801 acgttctcct actaaatatt ggtgagcagt atcactatta tttccctcgc tataagtccc
     4861 aaatttgaca taatctaaat tattacagca gactgaaact cgatacgttt tatcatcaat
     4921 agtacgggta accaaatcat aaaatttcat ctcggcaaag ctttttttgc cttccgcaat
     4981 aagtggaatc tgcttattgt taataatcaa atgtgtcgca ttcccgaaag tatccatctc
     5041 agatttattt aaatctttaa gtttaatttt gaaagcatca aaggcagatt cactatcatc
     5101 ttttttagca tctcgtttgc cagcaaaaac aacaaatacc gacttatcat cagctaagaa
     5161 tttaccggca agttcttgag ccttcccacc aaaaaatcca ccttcaagtg tcgtagagct
     5221 tttaccaaaa taaggatcat cggtattttt tgcgtttgct ttaccagaaa agcgattacc
     5281 tttaattttt gcatcaatat cgtaaattgt tgtaattttt tgctctttgc tacgactaac
     5341 atacccatta cgaaccaatg ttccagttaa agttttatta gcaaaatcag ccgtaaattc
     5401 tcctgtatgc cccattggtt tttcagaatc atcaacatta atatcgtaac tattttccgg
     5461 tgtggcgcca atattgatgc ctgcggaatt agaaaaatat ttactatctc tcccttttct
     5521 cgcatcggta gtaaaatccc aatatccttt ataagtagct ttttgagtag gtattgcttt
     5581 tgccggctct atacctaaat agtaaacata cccatgtgca cctgttctca aaatttcttt
     5641 aggctttatt tcaggttttg caccagaatg cagaacatag ccagaacgaa caaaattaaa
     5701 atctctagta tacaacttat gatttctatc atgagtatgg ctaaatccat cagcactact
     5761 accgtacgct ttaacctctt cttcatacgg aatttttgtc agatctccag taatctcttt
     5821 tatatcacca ataggggcta catcttcctt cccctgcgga aagagattac gacgcggaat
     5881 tttggctgaa aaaccaaacc ccggctgcaa taaagcttca gtttcagaag cgcttactgt
     5941 acgtcttgcg ttactattat catcttgtaa acttggcttt ttgggggtag tttgcgtttg
     6001 agattcaact ttggcagatt gaacatcaaa gcttccacca tttgaggaac aagcagcaag
//
LOCUS       DANLXO010000124         5919 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.126, whole genome shotgun sequence.
ACCESSION   DANLXO010000124 DANLXO010000000
VERSION     DANLXO010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5919
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.126"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            51..488
                     /locus_tag="PXD69_002361"
     CDS             51..488
                     /locus_tag="PXD69_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HDL6284505.1"
                     /translation="MLSLFDAGQRYLNTLPNQKKLANFMPDYHIIRLVKFSSKVMPAF
                     ACFALVWQYCFTDPTQSILANSVLTAVFAISIPFQGLYWLGKRARSPLSLSLLEWYES
                     LRQKLISAQVKLEETQAVPSFQDFANLLKLAEETWGDEYFDEL"
     gene            complement(773..1501)
                     /locus_tag="PXD69_002362"
     CDS             complement(773..1501)
                     /locus_tag="PXD69_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL6284506.1"
                     /translation="MKSFDKVWFSAKELEELDLPDLPKQATNITRKALKELWIKRDAV
                     GVKGGGNEYHITSLPRKAQEALGFKSGINAIKDSIVREITPEEQNKGSELSGTVLNNI
                     ISMIDSFASIKVSAGFGSFNEGVTKPDGQEPYADSLLHTLGVNAKKCAVFWASGDSMY
                     PTIDNGDQLLVDLSRNEIRGDNNIYIVQNGDSVWVKRVKLLWDGVELISDNREEYELI
                     KITADQAQNLQIIGQVVHIGHSLV"
     gene            1711..1938
                     /locus_tag="PXD69_002363"
     CDS             1711..1938
                     /locus_tag="PXD69_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284507.1"
                     /translation="MNKKKRAQDMHRADIRAELMKKGITFSQLGIENGLSKTTVRNAL
                     DKPYKNGEEIIAKALGKTPAEIWPSRYPDVA"
     gene            1953..3890
                     /locus_tag="PXD69_002364"
     CDS             1953..3890
                     /locus_tag="PXD69_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6284508.1"
                     /translation="MKDWFSAKELAGISGLSKYPTNVTRQAKKEQWATRPLKGVKGGG
                     FEYHINSLPTEVQTEIRSRFMSAVVEAKPKKLPVVRAEVDVGNLTTKQREIADARMAL
                     VAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLAELVAVANAKKTAKRTLSVRTLNGW
                     VVDYCKAENAEQRLKLLAPQVRQETKPEEIWWLSAFLGVYRQKNGICLTEAYREFEVE
                     WAYQYADNPLLLAQCPSLSQVQRAMNKLPLYVKEYGRRTGSHYKQLLSYVKRDWSVLR
                     ANDVWIGDGHSLKLKVAHPIHGKPFTPELTMIVDGAGRKVVGWSLALSENAFAVADAL
                     RHAISLHGVPAIYYSDNGGGEKNKFLDAEITGMLPRLGIRHETGIAGNPQGRGIIERL
                     NKTIGMTIARQFETGYATGADPETVRKTLYAVNSLANAKGELTPLQRKAQGKLPTWQQ
                     LIEVIQSVIDWYNNEHIHSEIRTTPARKYQQMLHAEDVVMLSPIELRDMSRPEFIRKP
                     DRGWVSWNNNHYFNLKLLDFDREEVVIGIDIHNAESVQVRTKDGRFICEAIWNGNTRE
                     AFPVAMVEQQRKERHKRRANLKQQQLDEINAELNPVLTIEQKNDFSLLATARKPKKEV
                     EPIFLTRAEKEDYEKKLAVGG"
     gene            3894..4775
                     /locus_tag="PXD69_002365"
     CDS             3894..4775
                     /locus_tag="PXD69_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL6284509.1"
                     /translation="MKNQELRALMDSKGYQQKQVAQLLGVSVATVSLYLKGDYNGNVA
                     EMDRKVDELIERDKAKVVEAKYNAAFVPTLAARRGMEVMQFAHIEGEINVIFGAAGLG
                     KTQMLKEYERRNSSATLIEVDPSCTPKVLLRKIAEAVGANARGVNNELLESIVNKLKG
                     SERLLMIDEAELLSTRSLEFIRRIHDLTSVGVVLAGMPRLLVNLKGKNNELAQLYSRV
                     GFACDLGNALSEEDLGLLAESALGTNEFNAPLIKACHGNARRLSKLMRGVVRSSEINQ
                     TPISKDLVEQYSKMLIS"
     gene            4786..5106
                     /locus_tag="PXD69_002366"
     CDS             4786..5106
                     /locus_tag="PXD69_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284510.1"
                     /translation="MQKVYSEKAGEMMNPLNAFIHDSLVKLEIATLECEAMELEVERV
                     EFEAKSPPRLVLRDNCKTQDLVKNGLASLFGMKTKGGRRYDSYQMQVRGVKCVWESER
                     VTKV"
     gene            5109..5300
                     /locus_tag="PXD69_002367"
     CDS             5109..5300
                     /locus_tag="PXD69_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284511.1"
                     /translation="MKKRRMIYALYVGEENVADGTAEELAERLGVEAKTVRFMSSPAH
                     NKRVKYNGKAIRTVKVGLE"
     gene            5313..>5919
                     /locus_tag="PXD69_002368"
     CDS             5313..>5919
                     /locus_tag="PXD69_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3164 family protein"
                     /protein_id="HDL6284512.1"
                     /translation="MSKVTIGNEIYWKDADGNLKPEALVKEIDKERDELVRQFVSKAQ
                     ALSKALGDFKQSVFDDVGAFVSLSADKYGVKIGGAKGNITLFTYDGEYKLQLAVQENI
                     RFDERIHAAKALIDECLHDWSEGAKPELKALIDNAFEVDKEGNLSTAKILSLRRVEID
                     DARWNQAMTAISDSVQVIGSKGYIRFYKRDENGKYQPISLDM"
BASE COUNT         1851 a         1102 c         1429 g         1537 t
ORIGIN      
        1 attttaatca gttagctaaa ataaaagaaa aatttgaaag agataatcct atgttaagct
       61 tatttgatgc aggacagcgt tacctcaaca ctctgccgaa tcagaaaaaa ttagccaatt
      121 ttatgccaga ttaccacatt attcgcttgg taaaattttc ctctaaagta atgcctgctt
      181 ttgcttgctt tgcattagtt tggcaatatt gctttaccga tccgacccaa tctattttag
      241 ccaattcggt acttactgct gttttcgcca tttctattcc gtttcaaggg ttatattggc
      301 ttggaaaacg ggcaagatca ccgttatctt tatcattatt ggaatggtat gagtcgctta
      361 gacaaaaatt aatttcggca caagtcaaat tagaagaaac acaagcggta ccttctttcc
      421 aagattttgc aaatttactc aagctagcag aagagacttg gggagatgaa tattttgatg
      481 agttataaaa taaaaaaagc cccacttaaa ataagtgggg taaaactttt gttctaattc
      541 tggaggtttg aattactgtt ttattgtggg gtactgatct tttttgcata gagagaaaga
      601 aaaaaatttg ggcggaaaaa taacggcgag ccccgtgaat acaagggttc gccgttattg
      661 tttggttgga gctatgcaaa aaacaaaatg agcaggatta gaaaaaaacg agcagttttt
      721 gcgttatttt ttgcataggt ttgatcggtt ttaaaactat tttaaatctg ttttaaacta
      781 aagaatgccc gatgtgtacc acttgcccga tgatttgtag gttttgggct tggtctgctg
      841 taatctttat taactcgtac tcttctcggt tgtctgaaat aagctctaca ccgtcccata
      901 gcagttttac acgcttaacc caaacactgt cgccgttttg tacaatgtaa atattattgt
      961 cgcctcgtat ctcattacga cttaaatcaa ctagtagctg gtcgccatta tcaatagtcg
     1021 gatacatcga gtctccactt gcccaaaaaa cagcacactt cttggcatta acaccaagcg
     1081 tatgcaacaa gctatcagca taaggctctt gtccatcagg ttttgttaca ccttcattaa
     1141 agctcccaaa gcctgcagat actttaatag atgcaaaact atcaatcatt gagattatgt
     1201 tattcaaaac ggtgcctgat aattcagatc ctttgttttg ctcttcaggt gtaatctctc
     1261 ttactatgct atccttgatt gcatttattc cacttttaaa tccgagtgct tcttgggctt
     1321 tacgaggcaa tgaagttatg tgatattcat tccccccacc ttttactcca actgcatcac
     1381 gttttatcca gagttctttt aatgcctttc ttgtaatgtt tgttgcttgc tttggaaggt
     1441 caggcaaatc caattcttct agttctttgg ctgaaaacca aactttatca aatgatttca
     1501 taattaaccc cttcttaatc aaaaatgatt ttaaaatcaa aattgattaa gttatttaaa
     1561 atcaatagct tacaaataga tttaaaaaag atttaaaaaa tttattaaat cactattgat
     1621 ttagaaaaga ataagtatta tatttagtcc tgtagttaat caagtacgct aaagcgtagc
     1681 aaataaacta aatgtggagg atctcacaaa atgaataaaa agaaaagagc tcaagatatg
     1741 catagagctg atattcgagc tgaattgatg aagaaaggaa taacattttc tcagttaggg
     1801 attgagaatg ggctttccaa aacaacagta agaaatgctc ttgataaacc ttataaaaac
     1861 ggtgaagaaa ttatcgcaaa agcattagga aaaacgccag ccgaaatatg gcctagtcgt
     1921 taccctgatg ttgcataaca aggatagctg ttatgaaaga ttggtttagt gcaaaagaat
     1981 tagcaggtat tagtggctta tcaaaatacc caacaaatgt aactagacaa gccaaaaaag
     2041 aacaatgggc aactcgtcca ttgaaagggg ttaaaggagg tggttttgaa tatcacatta
     2101 actctttacc caccgaagtt caaaccgaaa tccgctcccg ctttatgtcg gcggtggtgg
     2161 aagccaagcc gaaaaagtta ccggtagtgc gtgcagaggt ggatgtggga aacctgacca
     2221 ccaaacagcg agaaattgct gatgcacgaa tggcactggt ggcgtatgtg ttggagttgg
     2281 aaggctcaat gagccggatt aaagcgataa cctacctttg caaccttgcc aaacaaggcg
     2341 aaatgccacc gcacttggcg gagctggttg ccgtagcaaa tgctaaaaag acggcaaaac
     2401 gcacactctc ggtgcgaacc ttaaacggct gggtggtgga ttactgcaag gcagagaacg
     2461 ccgagcaacg gttgaaactg cttgccccac aggtacggca ggagaccaag ccggaagaaa
     2521 tttggtggct aagtgctttt ttaggcgtat atcggcagaa aaacggtatt tgcctcaccg
     2581 aagcctaccg agaatttgag gtggaatggg cgtatcagta tgcagacaac ccgctactgt
     2641 tggcacaatg ccccagccta agccaagtac agcgagcgat gaataagttg ccgttgtatg
     2701 tgaaagagta cggcagacgc accggctcgc attacaagca gttactgagc tatgtgaagc
     2761 gggattggtc ggtacttcga gcaaatgatg tatggattgg tgacggtcac tcactgaagc
     2821 tcaaagtagc ccacccgata cacggtaagc cgtttacccc tgagctgaca atgattgtcg
     2881 atggtgctgg tagaaaagtg gtgggctggt cgctggcact cagtgagaac gcctttgcgg
     2941 tggctgatgc actacgccac gccattagcc tacacggtgt gccggcaatc tactactcgg
     3001 ataacggtgg tggtgaaaag aataaatttt tggatgcgga aatcacgggg atgttgcccc
     3061 gcctcggtat ccgacacgaa acagggattg cgggcaatcc gcaggggcga ggcattattg
     3121 aacgcttaaa taaaaccatc ggtatgacga ttgcccgaca gtttgaaacc ggctatgcaa
     3181 ccggtgcaga tccggaaacc gttcgcaaaa ccctgtatgc ggtgaactca ctggcaaatg
     3241 ccaaagggga attaacccca ctacaacgta aagcccaagg caaattgcca acgtggcaac
     3301 agttgattga agtaatccaa tcggtgattg actggtacaa caacgagcat attcactcgg
     3361 aaatccgtac cacgccggca cgcaaatatc agcagatgtt gcacgcagaa gatgtggtga
     3421 tgttaagccc tattgagttg cgggatatga gccgaccgga atttatccgt aagccggatc
     3481 gaggttgggt aagttggaat aacaaccact attttaactt gaaattactg gattttgacc
     3541 gtgaagaagt ggtgatcggg attgatattc acaatgccga gagcgtgcag gtgcgtacca
     3601 aagacggcag gtttatttgc gaggcaattt ggaacggtaa cacccgagag gcattcccgg
     3661 tggcgatggt agaacagcag cgtaaagaac gccataaacg ccgagccaac cttaaacagc
     3721 aacagcttga tgagattaat gcggaattaa acccggtttt aaccattgag cagaaaaacg
     3781 attttagctt gctggcaacg gcaagaaaac cgaaaaaaga agtagaaccg atttttttga
     3841 cccgagcaga aaaagaggat tacgaaaaaa agttagcagt gggaggctaa acgatgaaaa
     3901 accaagaact tagagcctta atggatagca aaggctatca acaaaaacaa gtggcacagc
     3961 ttttaggtgt atccgttgcc acagtcagtc tgtatctcaa aggcgattat aacggcaatg
     4021 tggctgaaat ggatcgcaaa gtagacgagc tgattgagcg tgataaggca aaagtggtgg
     4081 aagcgaaata taacgctgct tttgtgccaa ctttggcggc acgcagagga atggaggtaa
     4141 tgcagtttgc ccatattgaa ggcgaaatta atgtgatttt tggggcagcc ggcttaggta
     4201 aaacccaaat gctcaaagaa tacgaacgca gaaacagctc tgcaacatta attgaggttg
     4261 atccgagttg cacacctaaa gtcttgctcc gcaagattgc cgaggcggtg ggggcaaatg
     4321 ccagaggggt aaataacgaa ctattagaaa gcattgtgaa caagttaaaa ggctctgaaa
     4381 ggttgctaat gattgatgaa gctgaattac tttcgacccg ctcgctggag tttatccgcc
     4441 gaatccacga tttaaccagc gtgggcgtgg tgttagccgg tatgccgaga ttgttggtta
     4501 atcttaaagg taaaaataat gagctggcac agctttatag ccgagtaggt tttgcttgtg
     4561 atttgggaaa tgccttgagc gaggaagatt tggggctatt agccgaaagt gcgttaggta
     4621 caaatgaatt taatgccccg ctaattaaag cttgtcacgg caatgcccgc cgattaagta
     4681 agttaatgcg tggcgtggtg cggtctagcg agattaacca aacaccaatt agtaaagatt
     4741 tggttgagca atatagcaag atgttgatta gctaaggagc aagttatgca aaaggtttac
     4801 agcgaaaaag caggcgaaat gatgaacccc ttaaatgcgt ttatccacga cagccttgtg
     4861 aagttagaaa ttgccacttt ggaatgtgag gcgatggagt tggaagttga acgagtggag
     4921 tttgaagcga aaagcccacc ccgcttggtc ttacgggata actgcaaaac acaggattta
     4981 gtcaagaacg gcttggcaag cctgtttgga atgaaaacca aaggcggcag acggtatgac
     5041 agctatcaaa tgcaggtgcg gggggtgaaa tgcgtgtggg agtctgaacg tgttacgaag
     5101 gtgtagaaat gaaaaaacgg cgaatgattt atgccctgta tgttggcgaa gagaatgtgg
     5161 ctgacggtac ggcggaagag ttagcagaac ggttgggggt ggaggcgaaa acagtgcggt
     5221 ttatgtcgtc ccctgctcac aacaaaagag tgaaatataa cggtaaagca atccgcaccg
     5281 tgaaagtcgg gttggaatag agaggaagta ttatgagtaa agtaacaatc ggtaatgaaa
     5341 tttactggaa agatgctgat ggcaatttaa agccggaggc attagtaaaa gaaatcgaca
     5401 aagaacgtga tgaattagtt cgccaatttg taagcaaagc acaagcgtta agcaaagcgt
     5461 taggtgattt taaacaatcc gtatttgatg acgtgggggc ttttgtcagc ctatcggctg
     5521 acaaatatgg agtaaaaatt ggcggtgcaa aaggcaatat cacactattt acttatgacg
     5581 gtgaatataa gttgcagtta gcagtgcaag agaatattcg ctttgatgag cgtattcacg
     5641 cagcaaaagc cttgattgat gaatgcttgc acgattggtc ggaaggggca aaaccggagc
     5701 ttaaggcctt aattgataat gcgtttgagg tggataagga aggtaattta tctacagcaa
     5761 aaattctctc tctccgccgt gttgagattg atgatgcaag atggaatcaa gcaatgacag
     5821 cgatttcaga tagcgtacaa gtgatcggta gtaaaggtta tatccgtttt tataaacgtg
     5881 atgaaaacgg aaagtatcag ccgattagtt tagatatgg
//
LOCUS       DANLXO010000125         5895 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.127, whole genome shotgun sequence.
ACCESSION   DANLXO010000125 DANLXO010000000
VERSION     DANLXO010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5895
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.127"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(45..1076)
                     /gene="tsaD"
                     /locus_tag="PXD69_002369"
     CDS             complement(45..1076)
                     /gene="tsaD"
                     /locus_tag="PXD69_002369"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDL6284513.1"
                     /translation="MRILGIETSCDETGVAIYDEDKGLVANQLYSQIDMHADYGGVVP
                     ELASRDHIRKTLPLIQEALKEANLQPSDIDGIAYTAGPGLVGALLVGSTIARSLAYAW
                     NVPALGVHHMEGHLLAPMLEENAPEFPFVALLISGGHTQLVKVDGVGQYELLGESIDD
                     AAGEAFDKTGKLLGLDYPAGVAMSKLAESGTPNRFKFPRPMTDRPGLDFSFSGLKTFA
                     ANTIKANLNENGELDEQTKCDIAHAFQQAVVDTILIKCKRALEQTGYKRLVMAGGVSA
                     NKQLRADLAEMMKKLKGEVFYPRPQFCTDNGAMIAYTGFLRLKNDEQTDLSISVKPRW
                     AMTELPPIN"
     gene            complement(1149..1928)
                     /locus_tag="PXD69_002370"
     CDS             complement(1149..1928)
                     /locus_tag="PXD69_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDL6284514.1"
                     /translation="MRKFKSLATLVLAGLFVAGCSNSNKELEQSNVQDLYGKGQTYLQ
                     DGDYNSAIRYLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPN
                     AANMDYVFYLAGLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQY
                     AQDAQNWMNYLFNRLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPY
                     LKEAYKQMNIPDAEQKTELLIQEYESKELPNPEKLKYGEQF"
     gene            2069..3046
                     /gene="rluD"
                     /locus_tag="PXD69_002371"
     CDS             2069..3046
                     /gene="rluD"
                     /locus_tag="PXD69_002371"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HDL6284515.1"
                     /translation="MTQQKILTAEITADLLGARLDQALAQLFPDYSRSRIKVWIESDL
                     VKVNGNIVNKAREKVFGGETVEITAEIEEEIRFEPQDIPLNIVYEDDDIIVINKPKDL
                     VVHPGAGNPDGTVLNALLHYYPPIAEVPRAGIVHRLDKDTTGLMVVAKNIPAQTHLVT
                     ALQKRRITREYEAIASGIMTQGGKVDEPMARHPTKRTAMAVHPMGKPAVTHYRIMERF
                     RNYTRLRLRLETGRTHQIRVHMAHIAHPLLGDQLYGGRPRPPKGASDSFLSVLRGFQR
                     QALHATMLRLEHPITGEMMEWHAPLPDDFIELIQALKADYELYKDQLDY"
     gene            3126..3248
                     /locus_tag="PXD69_002372"
     CDS             3126..3248
                     /locus_tag="PXD69_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin A/B family lipoprotein"
                     /protein_id="HDL6284516.1"
                     /translation="MKKLVLTILAAATFLTACNTVDGVGEDVEKAGDKIQQAAQ"
     gene            complement(3424..3708)
                     /gene="raiA"
                     /locus_tag="PXD69_002373"
     CDS             complement(3424..3708)
                     /gene="raiA"
                     /locus_tag="PXD69_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDL6284517.1"
                     /translation="MSLNISSKQMDITPAIRTHIEERLAKLEKYHTQLINPHFMLIKQ
                     PNSFQVEATIGTPLGDLVAKAEHEDLYTAIFDVKKKLEGQLIKLKEKNEH"
     gene            3888..4829
                     /locus_tag="PXD69_002374"
     CDS             3888..4829
                     /locus_tag="PXD69_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HDL6284518.1"
                     /translation="MSEKKQLPPFQTQFLHPKYWGLWLGLGVFKLILCLPYPILVKIG
                     LGLGKLFTKLGFGKRRMRIARRNLELCFPHYSAEKVEELVEENMKSVGMAIIETGMAW
                     FWSDKRILKWSKIEGLEHLTQRDQERGILLVGVHFLTLELGARIIGLHHQGVGVYRPN
                     DNPLLDWIQFRGRVRSNKAMLDRKDVRGMIRALKNGEMIWYAPDHDYGRRNSVFVPFF
                     AVEETCTTAGSYMLLRSAPKSLVIPFSPIRNLDYSGYTVKVSPAVDFSQCQNEVETAI
                     LMNRVVEREIMAALTQYMWLHRRFKTRPNEGDQSLYD"
     gene            4925..5812
                     /gene="dapA"
                     /locus_tag="PXD69_002375"
     CDS             4925..5812
                     /gene="dapA"
                     /locus_tag="PXD69_002375"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDL6284519.1"
                     /translation="MATPLFHGSIVALVTPMTHGEVDYQDLKKLVEYHIQAGSHAIVS
                     VGTTGESTTLSIDENVKVIKKTVEFADGRIPIIAGTGSNATSEAITMTKLLANSGVAG
                     CLSVVPYYNKPTQEGMYLHYKAIAESTDLPQILYNVPGRTGSDLKPETIGRLAKIENI
                     VAVKEATGDLSRLPLIKQLAGEDFIFLSGDDATGFESMKLGGQGVISVTNNVAAADMA
                     KMCELALAGQFTEAEEINNRLMALHHDLFVESNPIPVKWAAYKLGLISEPNLRLPLTT
                     LSESAQPVVLKALQQAGLI"
BASE COUNT         1767 a         1054 c         1243 g         1831 t
ORIGIN      
        1 ttaaattttt gcaaaattaa caagaaattt caccgcttga aaggttaatt aatcggtggt
       61 aattcggtca tagcccagcg gggttttacg ctaatgctta agtcggtttg ttcatcgttt
      121 tttaagcgaa gaaagccagt gtaggcaatc attgcgccgt tgtcagtgca aaattgtggg
      181 cgagggtaga atacttcgcc ttttaatttt ttcatcattt ccgcaaggtc tgctcgtaat
      241 tgtttattgg cacttacgcc gcctgccatt actaagcgtt tatagccggt ttgctctaac
      301 gctcgcttgc atttaattaa aatagtatca accacggctt gttggaatgc gtgggcaata
      361 tcgcatttgg tttgctcatc gagttcacca ttttcattaa gattggcttt aatcgtattc
      421 gcagcaaagg tttttaaacc ggagaaactg aaatccagtc ccggtctgtc ggtcattgga
      481 cgagggaatt taaaacgatt tggcgtgccg gattcggcta attttgacat cgctacaccg
      541 gcagggtaat ccaaaccgag tagtttgcct gttttgtcaa aggcttcacc ggcagcatca
      601 tcaattgatt ccccgagtag ttcgtattgc ccaacgccgt caacttttac cagttgggtg
      661 tgtccacctg aaatcaataa tgccacaaac ggaaattcag gggcattttc ttccaacatt
      721 ggggcaagta aatgcccttc catatggtga acgcccaatg ccggaacatt ccaagcataa
      781 gccagcgaac gggcaatggt tgagccgacc aataaagccc cgaccaagcc tgggccggca
      841 gtataggcaa tgccgtcaat atccgagggt tgcagattgg cctcttttaa ggcttcttga
      901 attagtggca acgttttacg gatatggtct cgagaagcca gttcagggac tacgccaccg
      961 taatcggcgt gcatatcaat ttggctataa agctggtttg ccactaagcc tttgtcttca
     1021 tcataaatgg caacaccggt ttcatcacaa gaggtttcaa tacctaaaat tcgcatagtt
     1081 ggagaagtca aaataagtta gaaaaccaaa aggggcgaag aacgcccctc acattattct
     1141 ctgtacgact agaattgttc gccatacttc agtttttcag gattcggtag ctctttgctt
     1201 tcatattctt ggatcaagag ttccgttttt tgctctgcat ctgggatatt catttgctta
     1261 tatgcttctt ttaagtatgg caatgcttgt ttggttgcca gtgtattcgg gtaaaaacgc
     1321 aacatttctt cgatacggtt tactacagcc acataggcat tacgttcatc ataaaattta
     1381 acaacggcta attcgtgttc cgctaaacgg ttaaataagt aattcatcca attttgagca
     1441 tcttgtgcat attggctttg agggtagcgc tgtacaatag tttggaagtt accgtaagca
     1501 ttacgaacat tatctacggc tcgagaggcg cgatttacac caaagaagtc ttgaataaaa
     1561 ttatcactta gacgtgcatt tgataatcct gctagataga atacgtaatc catattagct
     1621 gcattcgggt aagagcgagc aaaacgttct gcggcatcaa gtgctttata gtattcgcca
     1681 actttatatt gagcataaat taaacttagt tgggtttgct caccaagtcc tgaatattgg
     1741 cctcctttgg ttccaaccgc ttctaagtag cgaatggcag aattataatc tccatcttgt
     1801 aaataggtct gacctttgcc ataaagatct tgaacgttgg attgttctaa ttctttattt
     1861 gaatttgaac aacctgcaac aaacagtccg gctaatacta atgtggcaag agatttaaat
     1921 ttacgcatat gttttaccta taaaaagtgt ctaggacgaa aagttaatgt acaatgtcct
     1981 ctgactaaga ataacttatg aagttcatct cgctattcta tataacatca cgcaagtaag
     2041 caaatgacta attaggattt atggtttaat gactcaacaa aagattttaa cagcagaaat
     2101 tactgcagat ttactaggtg ctcgcctaga tcaggctctg gcacaacttt ttccggacta
     2161 ttctcgttca cgcattaaag tgtggattga aagtgatcta gtgaaagtta atggcaatat
     2221 cgtgaataaa gcaagggaaa aagtatttgg tggtgaaact gttgaaatta ccgctgaaat
     2281 agaagaggaa attcgttttg agcctcaaga tattcctcta aatattgtgt atgaagatga
     2341 cgatattatc gtcattaata aaccgaagga tttagtggtt cacccagggg ctggtaatcc
     2401 ggacggtaca gtgctgaatg ctttgctaca ttattatcca ccgattgcag aagtgcctcg
     2461 agcagggatt gttcaccgat tggataaaga cacgacaggc ttaatggtag tggctaaaaa
     2521 cattccggca cagactcact tagtaaccgc attacaaaaa cgtcgtatta cccgtgaata
     2581 tgaagcgatt gccagcggca ttatgacaca gggcggaaaa gttgatgagc caatggctcg
     2641 ccacccaact aaacgtacgg caatggctgt tcacccaatg ggaaaaccgg cggttacgca
     2701 ttatcgtatt atggagcgtt ttcgtaatta cacacgttta cgtttaagat tagaaacagg
     2761 gcgtactcac caaattcggg tacatatggc gcatattgct cacccattat taggtgatca
     2821 gctctatggc ggtagacctc gcccacctaa aggtgcgagt gactcgtttt tatcggtgtt
     2881 acgaggcttc caacgccaag ccttacacgc cacaatgttg agattagagc atccgattac
     2941 tggtgaaatg atggagtggc acgccccgtt acctgatgat tttattgaat tgattcaggc
     3001 actaaaagcg gattatgagc tttataaaga tcaattagat tattaagttt aggtgttgct
     3061 taaataatgt aaagttgcta tattgaaatc gttttcataa gtaaacaaca aaaaaggagc
     3121 tttctatgaa aaaattagta ttaactattt tagcagctgc aactttcttg actgcgtgta
     3181 ataccgttga tggtgttggt gaggatgttg aaaaagcggg cgataaaatt cagcaggctg
     3241 cacaataaca aaaagcttcg aattctaaga agctaataat atatatacct tattgaacaa
     3301 ttgttcaata aggtatattt ttgcgaaaaa tacggtaaat tttaccgctt actcttggaa
     3361 taaaaaatag ggctaaatga tatctctcat ttagccctta ttattagatg taaagtttaa
     3421 acatcaatgt tcatttttct cttttagttt aattaactga ccttctaatt tcttcttaac
     3481 atcaaaaatt gcagtatata aatcttcatg ttcagcttta gcgactaaat cacctaaagg
     3541 ggtgccaatt gttgcttcaa cttggaatga gttaggttgt tttatcagca taaaatgtgg
     3601 gtttatcaat tgggtgtggt atttttctaa cttagctaaa cgctcctcaa tatgagtacg
     3661 gattgcaggg gtaatgtcca tttgtttgct tgaaatattt aatgacataa cattttcctc
     3721 ttgtttagtt aaggcttttg ccgttgatat tctaataacc aaaatatgct catcactcca
     3781 aaaattcaag tgaaaaatga aataagtttc caaaaatttg atctacttaa cacttttagc
     3841 agtttttagc tataatgtaa tcataatcta gtatgtgaga ataattaatg agtgagaaaa
     3901 aacagttacc tccattccag acacaatttt tacaccctaa atattgggga ttgtggctcg
     3961 gtttaggtgt ttttaagtta attttatgtt tgccttatcc tattttagta aaaattggtc
     4021 tgggactagg taaattgttt actaaattgg gttttggtaa acgtcgtatg cgtattgctc
     4081 gccgtaattt agagctctgt tttccccatt actctgctga gaaagtagag gaattagtcg
     4141 aagaaaatat gaaatcggtt ggaatggcga ttattgaaac tggtatggct tggttttggt
     4201 cggataaacg tattcttaaa tggtctaaaa tcgaagggct agagcattta acacagcgtg
     4261 atcaggaaag gggtatttta cttgtagggg tgcattttct gactttagaa ctcggtgcaa
     4321 gaattattgg gctacatcat caaggagtag gggtttatcg accgaatgat aatccattat
     4381 tagattggat acagtttcga ggacgtgttc gctcaaataa agcgatgtta gatcgtaaag
     4441 atgtgcgtgg aatgattcga gctttaaaaa atggcgagat gatatggtac gcgcctgatc
     4501 acgattatgg aagacgaaat agcgtttttg taccattttt tgcagtggag gaaacttgta
     4561 ctactgcggg tagttatatg ttacttcgtt ctgccccaaa gagtttagtg atcccgttta
     4621 gcccgattcg aaatttggac tattcaggct acacagtaaa agtcagtcct gccgttgatt
     4681 ttagtcaatg tcaaaatgaa gttgaaacgg ctattttaat gaatcgggtg gtagaacgtg
     4741 aaattatggc tgcgctaact caatatatgt ggctacatcg ccgttttaaa actcgcccaa
     4801 atgaaggtga tcaaagccta tatgattaat tttaaataat ttcaaaaaag tgcttgcata
     4861 tttaagctga attttgcaat ctagcaatgt tatcaagcat aataaaaaaa tacaggagat
     4921 gattatggcg acccctttat ttcacggtag tatcgtagca ttagttacac caatgactca
     4981 tggtgaggta gattatcagg atttaaaaaa attagttgag tatcatattc aagcaggttc
     5041 tcacgctatt gtatctgttg gtacaacagg tgaatctacc acattaagca ttgatgaaaa
     5101 tgttaaggtg attaagaaaa cggttgaatt tgctgatgga cgtattccaa ttattgcagg
     5161 aactggttct aatgcgacca gtgaagctat cactatgact aaattattag caaacagtgg
     5221 tgtagctggt tgtttaagtg tagtgcctta ttacaacaag ccaacgcaag aggggatgta
     5281 cttacactac aaagcgattg cagaaagtac agatttacca caaattctgt ataatgtgcc
     5341 ggggcgaaca gggagtgatt taaaacctga aacaatcggt cgcttagcga aaattgagaa
     5401 tattgttgct gtgaaagaag caacgggtga tttaagccgc ttacctttaa ttaagcaatt
     5461 agccggtgaa gattttattt tcttaagtgg tgatgatgct accggttttg agtctatgaa
     5521 attaggtggt caaggggtga tctcggtcac caataatgtt gctgctgctg atatggcaaa
     5581 aatgtgtgag ttagctcttg ccggtcaatt tactgaagca gaagaaatta ataaccgctt
     5641 aatggcgtta caccatgact tatttgtcga atctaacccg attccggtga aatgggctgc
     5701 ttataaatta ggtttaatta gtgagcctaa tttacgttta ccgcttacca cactgtctga
     5761 atcagcacag cctgtagtgt taaaagcatt acaacaagcg ggcttaattt agttattttt
     5821 tgcaaatcaa atttgaaacc ggttaagtta attctaaccg gttttttcat atctaaaaga
     5881 aatttccaca taaaa
//
LOCUS       DANLXO010000126         5890 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.128, whole genome shotgun sequence.
ACCESSION   DANLXO010000126 DANLXO010000000
VERSION     DANLXO010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5890
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.128"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..388
                     /locus_tag="PXD69_002376"
     CDS             <1..388
                     /locus_tag="PXD69_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284520.1"
                     /translation="KITSDLAEKAKELNSEYNIKCEKLGYAITLFEKNSEIEKRYISL
                     LSDFDMDTSIKGFEKLSLLMNGKNDNARKEAEEHFNELQNGLLEAQDYKKDLDIKIRK
                     LARELYNENIAQLEIEEIKEHLYKNW"
     gene            397..2463
                     /gene="glyS"
                     /locus_tag="PXD69_002377"
     CDS             397..2463
                     /gene="glyS"
                     /locus_tag="PXD69_002377"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDL6284521.1"
                     /translation="MTTQNFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEK
                     VEWFAAPRRLAVKVLSLAESQPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITV
                     EQAERIATDKGEWLVHRAVIEGQPTKNLLVDIIAKSLANLPIPKTMRWGDKTEQFVRP
                     VHTVTLLFGAELIEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVAD
                     FNERKALILAKSQEKATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEA
                     LVYTMKGDQKYFPIYSKDGKLLPHFIFVSNINPEDPSKIIEGNEKVVRPRLTDAEFFF
                     KTDLKQKLEDQLPRLETVLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVAC
                     SVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSA
                     QLFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRA
                     VSHFRTLDSAEALAAANKRVSNILAKADIAIGDIDVSACVEPAEKALAEAVIALKAEV
                     QPLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVA
                     DISLLQ"
     gene            complement(2568..3869)
                     /locus_tag="PXD69_002378"
     CDS             complement(2568..3869)
                     /locus_tag="PXD69_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HDL6284522.1"
                     /translation="MNIHCEKLVQSILHAVNHEVVPALGCTEPISLALASAIARQYLG
                     HLPERIEAKVSPNLMKNGMGVAVPGTATVGLPMAAAIGAIGGEPDGGLEVLKNITPEQ
                     VKQAKAMLNTDKVSVSIFETEHILYSEATLFHQANRVCVRIAEHHTNVIYIEKNGQTI
                     LSKPCAVNNDNTTEIFASLSAKDIFNFSMQIELEKIRFIEQAAQLNSALSQEGLRADY
                     GLHIGRTLQKQIGLGLISDDLLNRIVIETTSASDARMGGASLPAMSNSGSGNQGITAT
                     MPIVVVARHLNVTDEQRIRALFLSHLMAIYIHSKLPKLSALCAVTTAAMGSCAGIAWL
                     LTGKFENISMAISSMIGDISGIICDGASNSCAMKVSTSVTSSYKSILMSMDNSQVTGN
                     EGIVEHDIDRSINNLCSIASRSMQYTDRQVIEIMVNKPKLK"
     gene            complement(3883..5160)
                     /locus_tag="PXD69_002379"
     CDS             complement(3883..5160)
                     /locus_tag="PXD69_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284523.1"
                     /translation="MDTQKLSPAEFKQATKFDSTDFGWIIMSIGMAIGAGIVFLPVQV
                     GLMGMWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPTVISGYLGKNWGIFLGVL
                     YFIMLVIWMFVYSTAITNDSASYLLTFGITNTLLSDNPFYGLVLICILVALSSRGEKL
                     LFKISTFMVLTKLFVVAALGLAMIGMWQLHNIGAMPPFGKLIKDAIITLPFTLTSILF
                     LQTLSPMVISYRAKEQSREVARYKALRAMNIAFAILFITVFFYAVSFTLAMGREEALK
                     AYEQNVSALAIAAQFFPGSWATYVGVALNIFAVMTAFFGVYLGFREATQGIVMNLLLR
                     KFPAEKINPNYVQKGIMLFSILLAWSAIVLNAPVLSFTSICSPIFGLVGCLIPAYLVY
                     KVPALFKYKGLALNIIIITGILLCISPFLTFLE"
     gene            complement(5189..5857)
                     /locus_tag="PXD69_002380"
     CDS             complement(5189..5857)
                     /locus_tag="PXD69_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDL6284524.1"
                     /translation="MPDKLEYLHDLDKEIMLSYFSLSEAIAGLLGEFCEVVIHSLNAY
                     EKSVIKIINGHHTNRKIGSPITDKGLQLLKCYQKDQSNTELVYFSRLNNGNLVKSTTH
                     IIIGHEGKPIGLFCINLNLSTPLDKTVSSFMNYDPIPPHYKSENFITHPKELIEETFL
                     KAVTHIEQHTTKHSKLYKKSIIFYLFENGIFELKEAVPIVAEKLSLTSHAIYKHLREF
                     KNNT"
BASE COUNT         1815 a         1145 c         1303 g         1627 t
ORIGIN      
        1 aaaaattaca agtgacttag cagaaaaagc aaaagaatta aattcagaat ataatattaa
       61 atgtgaaaaa ttgggatacg ccataacatt atttgaaaaa aactcggaaa tagaaaaacg
      121 ctacatatca ttattatctg actttgatat ggatacaagt ataaaaggat ttgaaaaatt
      181 gtctctacta atgaatggca agaatgataa tgctagaaaa gaagctgaag aacattttaa
      241 tgaattacaa aatgggctat tagaagctca agattataaa aaagatttag acatcaaaat
      301 taggaaatta gctagagagc tttataatga aaatatagca caattagaaa tagaagaaat
      361 caaagaacat ttatataaaa attggtaatt taaacaatga caacacaaaa cttccttgcc
      421 gagatcggca cagaagagct gccaccgaag gcactcaaaa aattagcgac cgcatttgcg
      481 gagaatgtag aaaacgaatt aaaccaagca ggtctttcgt ttgagaaagt ggaatggttt
      541 gctgctcctc gccgtttggc ggtgaaggtg ttgagccttg cggaaagcca gccgagtaaa
      601 gaggttgaga aacgagggcc ggcggtgtcg gcagcgtttg atgccgaagg caagccgact
      661 aaggcagcgg aaggctgggc gaagggctgc gggattaccg tagagcaagc tgagcgtatt
      721 gccaccgaca aaggcgaatg gttggtgcat cgtgccgtga ttgaaggtca gccgactaaa
      781 aatctgttgg tcgatattat cgccaaatcg ctggcgaact tgccgattcc aaaaacgatg
      841 cgttggggcg ataaaaccga gcagttcgtc cgccctgtgc ataccgtgac acttttattc
      901 ggggcggagt tgatcgaagg tgagatctta ggcgtgaaaa gcggccgtac tattcgtggt
      961 caccgtttct taggtgaacg tgagttccaa attgagaacg ccgatcaata tccgcaactg
     1021 ttgaaagatc gtggatctgt ggtagcagat ttcaatgagc gtaaagcctt aattcttgca
     1081 aaatcacagg aaaaagcaac cgctttgggt ggcgttgccg atattgaaga agatttgctg
     1141 gacgaagtga cctcgttggt ggaatacccg aacgtactca ccgccaagtt tgaagagcgt
     1201 ttccttgctg tgccggcgga agccttagtt tacaccatga aaggcgacca aaaatacttc
     1261 ccgatttatt caaaagacgg caaattgtta ccgcacttta tttttgtgtc gaacatcaat
     1321 ccggaagacc caagcaaaat catcgagggt aacgaaaaag tggttcgccc acgtttgacc
     1381 gatgcggagt tcttcttcaa aaccgactta aaacagaagt tggaagacca actgccacgc
     1441 cttgaaaccg tgttgttcca gcaacagctt ggcacattgc gtgataaaac cgctcgcatt
     1501 gaagcgttgg caggtgaaat tgcgaagcaa atcggggcag atgaaaccaa agcgaaacgt
     1561 gcaggtctcc tctcaaaatg tgacctgatg accaatatgg tgtttgaatt tactgatacc
     1621 caaggcgtga tgggtatgca ctatgcccgc cacgacggtg aagatgaaga agtggcggtg
     1681 gcgttaaacg agcagtatat gccacgtttt gctggcgata acttgccaaa ttcattggtg
     1741 gcttgctcgg tggcgttggc ggacaaattt gacacgctaa cagggatttt cggcattggt
     1801 caagccccga aaggcagtgc cgacccgttc gccctacgcc gtgcggcact tggctcgttg
     1861 cggattattg tggagaaaaa tttaccgctt gatttaaccg atttagtggc gaaatctgct
     1921 caattatttg gcgataaact caccaacaaa gacgtggttg aggacgtggt ggactttatg
     1981 ctcggccgct tccgtgcgtg gtatgagagc gaaggcattg cggtggacgt gatccaagcc
     2041 gttctcgccc gccgtccgac caagcctgcc gacttcgatg cccgtgtgcg tgccgtgtct
     2101 cacttccgca cccttgacag tgccgaagcc ttagccgcag cgaataaacg ggtgagtaac
     2161 attcttgcca aagccgatat tgcaattggc gacattgatg tttcagcttg cgtagagcca
     2221 gcagaaaaag cattagccga ggcggttatt gcgttgaaag ccgaagttca accgctgatt
     2281 gcacagggcg actacaccgc tgtgctggat aaattagcga acctccgcca accggttgat
     2341 gccttctttg acggagtaat ggtaaatgca gaagaccaaa aactgcgtca aaaccgcctc
     2401 gccattttaa gcacgctaca aggcttgttc ctgcaagtgg cggatatttc gctgttgcaa
     2461 taacaataag tttgcaataa ttgcaaaatt ttaatgaaaa tagaccgctt gcagtaattg
     2521 tgatctgcaa gcggtctttt ttgcttgaaa ttttaccaaa ggcgggatta tttaagtttt
     2581 ggtttattca ccataatctc gatgacttgg cggtctgtgt attgcatact acgagaggca
     2641 atgctgcata agttattaat tgaacgatca atatcgtgtt cgacaattcc ttcgttgcct
     2701 gttacttggc tattatccat agacatcaga atggatttat agcttgatgt tacgctggtg
     2761 gagactttca tcgcacaact gtttgaagca ccatcacaga taataccgct aatatcgccg
     2821 atcatactac taattgccat actgatattc tcaaatttcc ctgtgagcag ccacgctatg
     2881 ccggcacagc ttcccatagc cgcggttgtt acggcacaga gtgcagataa tttcggtaac
     2941 ttgctgtgaa tataaattgc catgaggtgt gataaaaaga gtgctctaat gcgttgctca
     3001 tcagtgacat ttaaatggcg ggcaacgaca acaatcggca tagttgctgt aattccttga
     3061 ttacctgaac ccgaattgct catagcaggt aaacttgcac cgcccattct agcatcagag
     3121 gcagaggtgg tttctataac aatgcgatta agcaaatcat cactgattag acctagacca
     3181 atctgttttt gcaatgtcct tccgatatgt agcccataat cggcacgtaa tccttcttgt
     3241 gagagtgcgg aatttaattg tgctgcttgc tcaataaagc gaattttttc caattcgatt
     3301 tgcatagaaa aattaaatat atcttttgcc gaaagtgaag caaagatctc agtagtatta
     3361 tcgttattga cggcacaagg tttgcttaaa atagtttgcc cgtttttttc aatgtaaatg
     3421 acattggtat ggtgttcagc aatacgaaca catactcgat tcgcttggtg aaatagtgtt
     3481 gcttcagaat atagaatatg ttctgtttcg aaaatagaga cagacacttt atcggtattt
     3541 aacatagctt tagcttgctt aacctgttct ggcgtaatat tttttaatac ttctaatcca
     3601 ccatcaggct cccctccgat tgctccaata gctgccgcca taggcaatcc gacggttgca
     3661 gttcccggta ctgctactcc catcccattt ttcatcaagt taggggaaac ttttgcctca
     3721 atacgttctg gtaaatgacc taaatattgg cgtgcaatgg cggatgcaag ggcgagagaa
     3781 ataggttctg tacagcctaa tgcagggaca acttcatggt tgactgcatg taaaatggat
     3841 tgtactaatt tttcgcagtg aatattcata gataaaacct tattactcta aaaatgtgag
     3901 gaatggagaa atacataata aaatgccggt aatgataata atattgagtg ctagcccttt
     3961 atatttgaat aatgcaggca ctttatagac taaataggcc ggaatcaagc acccaactaa
     4021 gccaaaaata ggactacaga ttgaggtaaa gcttaaaacc ggtgcattta atacaatcgc
     4081 actccaagcc agcagaatgg aaaataacat aatccctttc tgcacataat taggattgat
     4141 tttttcagcc gggaattttc ttaataatag gttcatcaca atgccttgag tggcttctct
     4201 aaaacctaaa tataccccga aaaaggctgt cataacggca aaaatattta atgcaacacc
     4261 tacataggtt gcccaactac cagggaaaaa ttgggctgca attgctaatg cggaaacatt
     4321 ttgctcgtat gctttgagcg cttcttctct ccccattgca agtgtaaaag agacagcgta
     4381 aaaaaaaacg gtaataaata agatagcaaa tgcaatattc atcgctcgta gggctttata
     4441 gcgcgcaact tcacgagact gttctttagc acggtaagaa attaccattg ggctgagagt
     4501 ttgcaagaag agtatagagg ttagggtgaa aggaagggta atgatggcat cttttataag
     4561 tttgccgaaa ggaggcattg caccgatatt atggagttgc cacattccaa tcattgcaag
     4621 ccctaaggcg gcaacgacaa atagcttagt taataccata aatgtagata ttttaaacag
     4681 tagcttttcg cctcgagaag ataaggcaac taatatacag attagcacta agccataaaa
     4741 tggattatca gagagtagtg tattggtaat gccgaaggta agaagatagg aggcactgtc
     4801 gtttgtaatt gcggtagaat aaacaaacat ccaaatcact aacataataa aataaagtac
     4861 acctaaaaag attccccagt ttttgcccag gtagccacta ataacggtgg ggtaatcttt
     4921 gcattccgga gattctgcta aagtattaat gaacagacgc tgaaaaaggt acatcgccgg
     4981 gtatccgata atagaagaaa gtagaaaaac ccacatgccc ataagtccta cttgtaccgg
     5041 taaaaagacg atgcctgccc cgatagccat accaatactc ataatgatcc agccgaagtc
     5101 ggtagaatca aattttgttg cttgtttaaa ttcggcaggc gagagttttt gagtatccat
     5161 agagtctcct taaatcgtaa cagtataatt aagtgttatt tttgaattct cttaaatgtt
     5221 tataaattgc gtggctggtt agggagagtt tttctgccac aataggtact gcctctttta
     5281 gctcaaagat gccattttca aacaaataga agataatgga tttcttatag agttttgaat
     5341 gtttggtagt gtgttgctca atgtgagtaa ctgcttttag aaaggtttct tcaataagtt
     5401 cttttgggtg agtaataaag ttttcacttt tataatgagg cggaatagga tcgtaattca
     5461 taaaagagct aacggtttta tctaatggtg tcgataaatt taaattaata caaaataatc
     5521 cgataggttt gccctcatgc ccgataataa tatgcgtggt ggacttaact aagttaccgt
     5581 tatttaaccg tgaaaagtaa accagctcag tattagattg atctttttgg taacatttta
     5641 gtaactgtaa tcctttatct gtaataggcg aacctatttt tcggttagta tgatgtccgt
     5701 taatgatttt aataacggat ttttcatagg cattcaatga atgaataacc acctcacaga
     5761 attctcctaa taaccctgct attgcttcac ttaatgagaa ataagacagc ataatttctt
     5821 tgtctaaatc atgaagatac tctaatttat ctggcataac ttttactcca atttttgtga
     5881 attataagaa
//
LOCUS       DANLXO010000127         5886 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.129, whole genome shotgun sequence.
ACCESSION   DANLXO010000127 DANLXO010000000
VERSION     DANLXO010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5886
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.129"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..239
                     /locus_tag="PXD69_002381"
     CDS             <1..239
                     /locus_tag="PXD69_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HDL6284525.1"
                     /translation="LFVISPMALAYSCNDPIPYCKEMQSCEQAKFYLNQCNAGRLDRD
                     NDGIPCENVCGKKGKSEKKDDKKSDKSKSKKTSN"
     gene            271..1080
                     /locus_tag="PXD69_002382"
     CDS             271..1080
                     /locus_tag="PXD69_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL6284526.1"
                     /translation="MMNNQSVWHLFCDESGISGKPFYAFGALWIREDKISLFEKEIQK
                     LREKHYCTDEIKWQGTNSKRFSEFYRELVSFFFQADYLFFNCIVVQQAIVNKAFHNGD
                     YEMAKQKHFNLLICNKIEQSLYKNRINRFVLSVDDLPFKYNKADEAMHIIANNIIRKK
                     TAVANAILALNEVDSRKSSGVQLCDLLLGAILSSYQNDITSERKKELTKWIALHLGWD
                     KLTYDTLQEEKKFNIWYFYDPTKGPRIVRTRETKLKYPLLKKKEQTFQPAR"
     gene            complement(1263..2501)
                     /locus_tag="PXD69_002383"
     CDS             complement(1263..2501)
                     /locus_tag="PXD69_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDL6284527.1"
                     /translation="MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHR
                     LIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAILSVGLGWQNSPLTYKGEYTVDE
                     LTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFE
                     NEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRIT
                     RSSGDSHSFSIAEGDNYKAVKAYWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVK
                     RGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEAIKTLPHTYATAQSA
                     INACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSL
                     NKGGGFTTALEMELKPKSED"
     gene            complement(2501..2938)
                     /locus_tag="PXD69_002384"
     CDS             complement(2501..2938)
                     /locus_tag="PXD69_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284528.1"
                     /translation="MLQQFAMMSLGYFVFMRLTIPYQDTSREMNWSHVQNDVVGAMPK
                     SQFTGKAGETMEISAELRPEITGGKMSILALEMMAEQGSAYPLISGSTFMVLGWFVID
                     RISEQETTFFADGTPRAISFSMSLKRVDDSLLANIIDEVAGFI"
     gene            complement(2940..3287)
                     /locus_tag="PXD69_002385"
     CDS             complement(2940..3287)
                     /locus_tag="PXD69_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284529.1"
                     /translation="MEIKTVTFSKVITAFIFHIITLFVFTQLNEQAQATFMFFWWFFI
                     SLRFILVVGIMCVGIEELKIQEYRQTKAYACFSFISNFALCLQFVYFEHLIAAILFLI
                     SYIIYHSQTVTIK"
     gene            complement(3351..3467)
                     /locus_tag="PXD69_002386"
     CDS             complement(3351..3467)
                     /locus_tag="PXD69_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL6284530.1"
                     /translation="MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES"
     gene            complement(3491..3805)
                     /locus_tag="PXD69_002387"
     CDS             complement(3491..3805)
                     /locus_tag="PXD69_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL6284531.1"
                     /translation="MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVD
                     EWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEI
                     LA"
     gene            complement(3884..4390)
                     /locus_tag="PXD69_002388"
     CDS             complement(3884..4390)
                     /locus_tag="PXD69_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL6284532.1"
                     /translation="MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMI
                     APVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELV
                     CRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLA
                     EIRKAMGL"
     gene            complement(4399..5580)
                     /locus_tag="PXD69_002389"
     CDS             complement(4399..5580)
                     /locus_tag="PXD69_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HDL6284533.1"
                     /translation="MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAET
                     FPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANI
                     VGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISD
                     NGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTV
                     GWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLA
                     TDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDP
                     RILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKA
                     L"
     gene            complement(5687..5833)
                     /locus_tag="PXD69_002390"
     CDS             complement(5687..5833)
                     /locus_tag="PXD69_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284534.1"
                     /translation="MLAEKPKKRWRFWYAFVNGLFFDKKHCYAAYKAEVYRKQYPPEF
                     TEIT"
BASE COUNT         1620 a         1273 c         1229 g         1764 t
ORIGIN      
        1 ttttatttgt tatttcgcct atggctttgg cttatagctg caatgaccct atcccttact
       61 gcaaagaaat gcaatcttgc gagcaagcaa agttttattt aaatcaatgc aatgccggtc
      121 gattagatag agataacgat ggcatacctt gtgaaaatgt ttgtggcaag aaaggaaagt
      181 ccgagaaaaa agacgataag aaatcagata aatcaaaatc taaaaaaact tcaaattaga
      241 gacaggcgtt gtgcctgatt aaaaggggta atgatgaata accagtcagt ttggcactta
      301 ttttgcgatg aatccggtat aagcggtaag cctttttatg ctttcggtgc attatggata
      361 agagaagata aaattagctt atttgaaaaa gaaatacaga aattacgaga aaagcactat
      421 tgcactgatg aaataaaatg gcaaggtaca aattctaaac gctttagtga attttatcgt
      481 gaattggtta gttttttctt tcaggctgat tatttatttt ttaactgtat tgtagttcaa
      541 caagctattg tcaataaagc ttttcataac ggtgattatg aaatggcaaa acagaagcat
      601 tttaatttat tgatttgcaa caaaattgaa caatccttat ataaaaacag aataaatagg
      661 tttgttttat ctgttgatga tctacctttt aaatacaata aagctgatga ggcaatgcac
      721 attatcgcta ataatataat tcgtaaaaag actgccgtag caaatgctat tctagcatta
      781 aacgaagtag attctcgtaa atcatctggc gttcaactat gcgatttatt attaggagca
      841 atattaagta gctatcaaaa tgatattaca tcggaacgta aaaaagaact aacaaaatgg
      901 attgctttgc acctaggttg ggataaatta acttatgata ctttacagga ggaaaagaaa
      961 tttaatattt ggtattttta cgaccctaca aaaggaccta gaatagtaag aacgagagaa
     1021 acaaaactta aatacccact attaaaaaag aaagagcaga ccttccagcc tgcacggtga
     1081 gtgtcctcaa ggacttatat gtgtaaaaca acgcccaatt tcctcactgg gcggaatcac
     1141 acaaagtagc cgcccctatg attctttgtg ttttatgtaa ataaatctgt aactttgatt
     1201 aatattactt gttcaagatc agagatgcaa ggctttttta tagtgatttt ataaaaatag
     1261 cgttagtctt cagacttcgg cttcaactcc atctctaacg ctgtcgtaaa cccaccacct
     1321 ttatttaaac tgtgcgtaac ctgcgaaatt atccactcgt tgctatcaat ctccgcctta
     1381 aagcctgaaa cctgaaccgg taattcgggg ataagctccg cattgccctc ggcaagagtt
     1441 aggctaaaag ttgccacacc tcgttgtagt ttttcaaaat tccgtttaca agcattaatc
     1501 gctgattgtg cggtagcgta agtatggggt agggttttaa ttgcctcgct atcactttca
     1561 atcggtttac tttgcaccac tgcattaact tgcctgcctt tgccttttac aaagacggtc
     1621 tctttaatgc tcttgccgtc tttgcctttt atcggcttgc cgtctgcccc acgttttact
     1681 ttagtctttt tccgcattgt gggcttagtc acttttttaa cttggctgtt ttcgtcccac
     1741 gtcacctcgc ctcgcttgcc ggtttgcgtg ttgtgccaat aggctttaac cgctttgtag
     1801 ttatcccctt cggcaatcga aaagctatgg gaatcccccg aactgcgggt aatgcgaaac
     1861 aggggtaaca gtttaccgct tgcggttgtg gcgtttccgg ctttaatgaa aatcaaattg
     1921 ccgtttttca cggtagcaat ggcatcaaat tgttctgcga ggcgttgcaa gagattaata
     1981 gagctttcgt ttgtttggtc aatgtgtttc acctcttcgt tttcaaactc cttgcccacc
     2041 atcggcttga gtttgttctc ttcggcgatc tgtttcacaa ttttaccaat ggtggtgcgg
     2101 tgaaagctcc gctcgtggcg attggtcagc gtgcctcgca aatcagcact tcttgcccga
     2161 atcgtgactt tatcaggtgg gccatcgtgg gttagctcgt ccaccgtgta ttcgcccttg
     2221 taggtcaggg ggctgttttg ccagcctaac ccgaccgata aaatcgctcc tcgacttggc
     2281 aaagcgagta agccatcagt gtcgtccagc tctaaatcca gctggtctgc ctcaaagcct
     2341 cggttgtcgg ttaaggtgag ttgaattaag cggtgcgtga tcagggtgga aatatctttg
     2401 gctttttcgc cctcattatc tttgcttggc tttgggcgaa ccgtcaccga aacagccggt
     2461 gtgcggtggt tatgattggt tagctctgtt aaaaaatcca ttaaataaac cctgcgacct
     2521 catcaataat attggcgagc agactatcat caacccgttt aagcgacatc gaaaagctaa
     2581 ttgcccgggg cgtgccgtct gcaaaaaagg tggtttcctg ctcgctgatt cgatcaatca
     2641 caaaccagcc tagcaccata aaggttgaac cactaatcaa cggataagcc gagccttgct
     2701 ctgccatcat ctcaagggca aggattgaca ttttgccccc ggtaatttca gggcgtagct
     2761 cggctgaaat ctccattgtc tcccctgcct tgccggtaaa ttggcttttt ggcattgccc
     2821 caaccacatc attttgaacg tgcgaccagt tcatttctcg gctggtgtct tgataaggga
     2881 ttgtcaatcg cataaacaca aaatagccta gcgacatcat tgcgaattgt tggagcatat
     2941 tatttaatcg ttacagtttg gctatgatat atgatgtaag aaatcaaaaa taaaattgcc
     3001 gcaataagat gctcaaagta aacaaactgc aagcataacg caaaattgga tatgaaacta
     3061 aaacaagcat aagcttttgt ttgtcggtat tcctgaattt taagttcttc aataccaaca
     3121 cacattattc caactacaag gatgaatcgc agagaaatga agaaccacca aaagaacata
     3181 aaggtagctt gagcttgctc attaagttga gtaaaaacaa ataacgtaat gatatgaaaa
     3241 atgaatgctg taatcacttt actgaatgta actgttttaa tttccatttt aaaatcctta
     3301 tagcaagcgg tcgagttttg caaatttttt gcgaaaaacg accgcttgtt ttaactttcc
     3361 accccatttc gtaagcgggc cttttctcgc cattgcccta gctcgacaat cgtcatttca
     3421 tcaaaggtgt tgggtgtcca atgaaacacg gtagcaatat cagcaatagc gtcatcaaca
     3481 aactgtggaa ttaggctaaa atctcgccct ttccctgttc ttcgctgtcc tcttcgtctg
     3541 cctcatcgaa gtcttcgctc attaaatcta aggctttgcc ggagagtttt agcaaatccg
     3601 ctgccgacat tgtggcaaaa tcggctttgt ctaattttgg cgtggtaatg cgtggcagta
     3661 caatacacca ctcatcaacg cttaactgca ttaatgaggt aagatttgtg ccacgcagtt
     3721 gtttggttaa tggcttacgc acctcaatct cggtaatacg tttttcacca cgcaaaatgc
     3781 cttgttttaa tgttactttt ttcattgttt aatccttaat tatttatcat taaaagcccc
     3841 ttgaaaaaag gggaaggggc tttgggaaaa tttaggggaa aatctataaa cccattgcct
     3901 tacgaatttc cgctaagcgg tctttgccat cgacaatgta aatttggttg agggtgtcga
     3961 tttcgataat atcgacaccg ttcaccgttt ttttgtaata ggttagcgag gctttatagc
     4021 tatgctcggt gtcatcaccg gctttgcttg agccttcgtc aatttcagcg attcgcccac
     4081 ggcagactaa ctctaccgca tcgactgaat cgtcatcgtc gtgctggtac gcaccgttga
     4141 aacggaacgc attaccactg attgagccac caaatagctt gagcaaatcc tcttcgtgtc
     4201 cgccgatttt gaactcaagc tccagtttct ctaaacccat attgacaccc acaggggcaa
     4261 tcattccgcc tgctcggtag tcttcaagtt gcatagccag tttcggctgt gtgacttcgg
     4321 tggtttcgcc caaatagctt gtgccgtcca ccgaaaaatt aaaattctta agttttgccg
     4381 gtaatcccat ttttacctct ataacgcttt aagtgtattg actaaatcca ctacatattc
     4441 atcattgacc cgttgctcta agcctaggct ttcgagggac ggaatccaat ggtaatcgta
     4501 tttaataaca aatttgcctg atttgataat atctgcggtg atctcttcag ctacccacac
     4561 acgagcacct aaaatgcgag ggtcatcacc cgatgcccaa gagcgtagct tgttgttaat
     4621 cgcctctagc attgttttca cacgcaacgg tgtgagtggc atatccaccg cccaagctaa
     4681 gcctgctccg attgtctctt taatgatttg agccgtccgc accgactgct gaaacgccca
     4741 gcgggtatcg gtggcaagag tgcgggaacc ccaatagcgg aaaccgttat ggtttaagca
     4801 aatggtaatg cctttttcgt tcaggtagtt tgcctcggtt gagctctcgt taatatcaaa
     4861 ctctaccgct ttagtgatac cggttacacc gtctagctct acgtttgaga tgtttttatg
     4921 ccagccgaca gttttgtcga tataggcttg caacgcacaa gctcgggcca ctgcataatc
     4981 ggtatcatag gcttttttat cagtgttata agatttccag tcaccgaaga tcatcattcc
     5041 ttcacgctga gagaaattct ggcgataggt atatgcctgt tctttggtgg ttgcaccgtt
     5101 gtctgaaata aacgcaaacg cattcagctt tttagccacg cttaatagtt cggtcgcaac
     5161 ggcttgatta tcgtgctgtg gtacacaaag caatttcggc ttaacaaaca cggttgattg
     5221 agcggttaat aacgccttaa taccggtaaa tttgccgttt tcctgcgtgc cgacaatatt
     5281 tgcagttaag gtgtcgctat cgtccgactc ggcaactcgc acgatcaccg ttggcgtttt
     5341 aacgattgag ccaatcgaat taagtgtgcg gcgtaacgtg ccggtgctac ctgctttttc
     5401 aaggtaattt aacgggttag taattaaaac gggcgtattc agcggaaaag tctcggcatc
     5461 ggcttggtct ccggtgcaaa ctactccgat aaccgaagta gcagcggtgg aaatggtgac
     5521 accacctgca ttgacctcaa ccacctcaac accgtgtaga taggtatcta aaattgacat
     5581 agtattcctt aattgggaaa ggttagggtt gaatgttggg gtaaacttta aaaaataacc
     5641 gctcgggttg cgagcggttc gggctgtgaa atggggttta acaggattaa gtgatttcgg
     5701 taaactccgg tggatactgt tttcgataca cctccgcttt ataggctgca tagcaatgct
     5761 ttttatcaaa aaacaagcca ttcacaaacg cataccaaaa acgccaacgc tttttcggct
     5821 tttccgcaag cattgcacca cggtaacaac ggctgctgga aaaggtagcg gagcttgttt
     5881 aaattg
//
LOCUS       DANLXO010000128         5791 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.130, whole genome shotgun sequence.
ACCESSION   DANLXO010000128 DANLXO010000000
VERSION     DANLXO010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.130"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..576
                     /locus_tag="PXD69_002391"
     CDS             <1..576
                     /locus_tag="PXD69_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL6284535.1"
                     /translation="GAYLEASEAQIFRGKYQEMEFVPNPDFDGPYYGLDFGFAQDPTA
                     AVKCWVFNGDLYIEFEAGKVGLELDDTADFIAKGVPQIADHVVRADSARPESISYLKR
                     HGLPRIIGVEKWKGSVEDGIEHIKSYGKVFIHPRCQQTLNEFRLYSYKTDRLSGDVLP
                     VVIDAHNHFIDALRYALTPLMQVKSAKGVLL"
     gene            573..1949
                     /locus_tag="PXD69_002392"
     CDS             573..1949
                     /locus_tag="PXD69_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HDL6284536.1"
                     /translation="MSLEQDRLAFLAEALGLGNIKRRTLWKEFGYPNTLTFNHFLKAY
                     KRNSIAFAAINRLLDGCWVDCPVIVEGEQKNESKQTTEWESKVERFMKRYWSAIKEAD
                     RRNLVGNYSALLLQVRDGQQWDQPILQGALSSIGEFGLVKLIPVWQSQLSVTEFQEDV
                     TADNYGEPLMYQFSESAFGKKSVSRNIKVHASRVILLNEGGDFNSPHSGVPLLEAGYN
                     KLVDLEKTSGGSAEGFLKNASRQLGIKLTKDVDLRQLEDSAKALGFSSFSDALNDKIK
                     KINSGTDSALITHEGDASVLSVAPADPKPTWEISANEFAASVQIPFTILFGQQTGRLA
                     SDEDKTDWANRCNGRRNGFLTDVITQLLNRLWFIGVLPMPKNSDVTVSWSDLLAPSEK
                     EKIANAQALASVATTSQSAFGFAAVTANEIRESLGFEPLPDNLIPPTIDDENEDQDEN
                     QATADSDK"
     gene            1903..2841
                     /locus_tag="PXD69_002393"
     CDS             1903..2841
                     /locus_tag="PXD69_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL6284537.1"
                     /translation="MKIKTKIKPLRIPTNKADPLNMGVSVAKLFRHIDVIYSQIKRSI
                     KQQILQKMSLRLQANNFEYFPSYLTATELADLLETLQKIIDKEILSNGSQGENLWFDS
                     YIDEAALKGTQSAVTDLGLQSEAYRSQRNLSSIVFSPAYFNRLAIAHMASYSEWQGLS
                     DELRKSLAGVITEAVLNGKNVKETAREIRQKLDVSSKRAKRIAQSSQLAAYRRAEWQE
                     AEEAKEELGLNTKLLHFSALKATTRLAHAQRHGKYFDVAEVREWYSRDGNQFNCYCKQ
                     SVVVVNADGKTDIEPLLVGLAKERKQWVGALKNVKK"
     gene            2828..4198
                     /locus_tag="PXD69_002394"
     CDS             2828..4198
                     /locus_tag="PXD69_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HDL6284538.1"
                     /translation="MSKNNVNIVTVINSKNISTESIDGDQHLIIRGVVPIVDDVVMND
                     GLYPADEINKSYNSLEGNFMPLGHPKIEGKYVSAQDVRAVNKHHVGAWAKNVRKESGK
                     VLVDMYINRRFAEGSEQGKTLLERLDGMVTNTNAEPIHVSTGLILNKVKQSGKSKGKK
                     YSWIATNMSFDHIAILLDVPGAATPDDGVGIFVNQDGSEMGVENVNLTQAADYRTEKL
                     FDKVRFYLMANSDLSFEEIHRALREAIRPEGKDKWSFWVEAVYPKYFIYSDDNSGKKY
                     KRSYFIDENDNVQLTSEPVEVVKKIGYEEITTNEEHNPMKTKILAVLNAANVKTEGLN
                     DDQLLEAYNKLQADKGKEPEKPKNEDDSEIDEKIKKAVNAAIEPLQQALQANTDKEQA
                     AMRAAVKAKFNMSDAAVNALQGEVLTELYAQTQQSVGLNNNSANGNGDNQWDGYSLNQ
                     EEKGNE"
     gene            4191..4625
                     /locus_tag="PXD69_002395"
     CDS             4191..4625
                     /locus_tag="PXD69_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284539.1"
                     /translation="MSNVIYRGSVKREPQTVNIVINDTSAPGAVVKLHNGKLEAAADL
                     KGRRFLLGNNRFKGQTIEQAYAKGDTATAFRLEPEQEYYAQIADGTYNFGDELTVKQA
                     GGKLTKAETGDVVLFFFDEESQRVISGGKGYADVVVANAYTK"
     gene            4640..5629
                     /locus_tag="PXD69_002396"
     CDS             4640..5629
                     /locus_tag="PXD69_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HDL6284540.1"
                     /translation="MLKFTKEQERFVINERINYDKKHALMAANSAGLLGNAMTLPKDV
                     WAEWDRDAVQIQREELVVFNDLAGISKSMPIGKLIHHFQTVSDSGSVNISLDGRSSAK
                     TDNVVLNYHGTPLPIIDSTFSFGWRDMSAAQSEGYQIDGAARANSLRKVAEKMEDLAL
                     NGDSSIVVGNAKLYGLRTAPNRMTNTHNLDLATATPKEIYDVFRDLISKFHAKNYYSP
                     VTLYVNYGDYFAMSTRDYSEQKSEGSILNKVMTIPQIAKIVPASRVPQNEILGLCKRS
                     DVYQVLNGMPLVTRPIARHNETDDYSFQIMAAVAVEFKFDDKGNAGYIQYTKS"
     gene            5641..>5791
                     /locus_tag="PXD69_002397"
     CDS             5641..>5791
                     /locus_tag="PXD69_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284541.1"
                     /translation="MKWLLTHDSHELKKGDVYEGETLPLWLVGKAIEIEEKSFEVATP
                     SDHADG"
BASE COUNT         1734 a         1247 c         1439 g         1371 t
ORIGIN      
        1 ggtgcttatt tggaagcgag cgaagcgcaa atctttcgcg gtaaatatca agaaatggaa
       61 tttgtgccga accctgattt tgatggccca tattacggct tagattttgg tttcgcgcaa
      121 gatccgacgg cggcggtcaa atgctgggta tttaatggcg atctgtacat cgagtttgaa
      181 gcaggcaaag tgggcttaga acttgacgac accgcagact ttattgccaa aggcgtgcca
      241 caaattgccg atcacgttgt gcgtgcagat tcggcgcgtc ctgagtcaat tagttacctc
      301 aaacgtcacg gcttaccgcg cattatcggt gtggagaagt ggaaaggctc ggtggaagac
      361 ggcattgagc atattaagtc ctacggcaaa gtctttattc acccacgctg tcagcaaacg
      421 ctcaacgaat ttcgccttta ttcgtacaaa accgaccgct tatcgggcga tgtattgcct
      481 gtcgtgattg atgcccataa ccactttatt gatgcgctac gctacgcatt aacgccgttg
      541 atgcaagtta aaagtgccaa aggagtttta ctatgagcct agagcaagac agactggctt
      601 ttttagccga agccctaggg cttggcaata tcaaacgaag aacgttatgg aaggagtttg
      661 gctaccctaa taccttaaca ttcaaccatt tcttaaaagc ctataagcgc aatagtatcg
      721 cttttgcagc gattaaccgc ttacttgacg gttgttgggt tgactgcccc gtaatcgttg
      781 agggtgagca aaagaacgaa tcaaagcaga caaccgaatg ggagtccaaa gttgaacgtt
      841 ttatgaaacg ctactggtcg gcaatcaaag aggcagatag acgaaacctt gtcggtaact
      901 attcggcgtt attacttcaa gtaagagatg gtcaacaatg ggatcagcct attttgcaag
      961 gcgcgctatc tagcattgga gagttcggac tggttaaact gatccccgtg tggcagtcac
     1021 agctttcagt gacagagttt caagaggatg tgaccgccga taattacggc gaaccgctga
     1081 tgtatcaatt cagcgaatct gcctttggca aaaaaagcgt gtcacgaaat atcaaggttc
     1141 acgcaagtcg tgtaattttg ctcaatgagg gtggcgactt taattcccct cattctggag
     1201 ttcctctgct tgaggcgggt tacaacaagc tagttgatct cgaaaaaaca tcgggcggca
     1261 gcgccgaagg ttttctgaaa aacgcaagcc gacaattagg gatcaaatta acaaaagatg
     1321 ttgatttgag acagctcgaa gacagcgcaa aagcccttgg gttttcttca ttttctgatg
     1381 cgttgaacga caagatcaag aaaatcaact caggaacaga ctcagccttg attactcacg
     1441 aaggtgatgc ctctgtgttg tcagtcgcac cagcagatcc gaagccaacg tgggaaattt
     1501 ctgcaaatga gtttgccgcc tcagtacaaa tccctttcac gattttgttc ggacagcaaa
     1561 cagggcgatt ggcaagtgac gaggacaaaa ccgactgggc aaaccgttgc aacggtcgtc
     1621 gaaatggttt tctcaccgat gtgataacac aactacttaa tcgcttgtgg ttcatcggtg
     1681 tgctacctat gccaaaaaat agcgatgtca cagtgtcttg gtctgactta cttgcaccaa
     1741 gcgaaaaaga gaaaatcgca aacgcacagg ctttggcttc agttgcaact acatcgcagt
     1801 ctgcctttgg ttttgccgcg gtaacagcga acgaaatccg cgaatcttta gggtttgaac
     1861 ctctgcctga taatctgatt ccgccaacaa ttgacgacga aaatgaagat caagacgaaa
     1921 atcaagccac tgcggattcc gacaaataaa gccgatccgc tcaatatggg agtgtcggtt
     1981 gccaagctat ttcgtcacat tgatgtcatt tactcacaaa ttaagcgctc cattaagcaa
     2041 caaatcttgc aaaagatgtc actgcgactg caagcaaata attttgagta ttttccttcg
     2101 tatcttactg cgactgagtt ggcggatttg cttgaaacct tgcaaaagat tatcgacaaa
     2161 gagattttgt cgaatggttc tcaaggcgaa aatctctggt ttgactccta tatcgacgaa
     2221 gcagcactaa aaggcactca gtctgcggtc actgatttag gtctgcaatc agaggcttat
     2281 cgcagtcagc gaaacttatc atcaatcgtt ttcagtcctg cgtacttcaa ccgattggcg
     2341 attgcacaca tggcaagtta tagcgagtgg caaggtttaa gcgacgagtt gcgaaaatct
     2401 ttggcggggg tgatcacgga ggcggtttta aacggcaaaa acgtgaaaga aactgcccgt
     2461 gagattcggc aaaaacttga tgtgtcatca aaacgggcga agcgaatagc gcaatcaagc
     2521 cagttggcgg catatcgtcg ggcagaatgg caagaggcgg aagaggcaaa agaagaactt
     2581 gggctaaaca ccaagctctt acatttttca gcgctcaaag ctactacgcg attagcacac
     2641 gcccaacgcc acggcaaata cttcgatgtt gcagaggtgc gcgaatggta tagccgagac
     2701 ggcaaccaat tcaactgtta ctgcaagcag tctgtggttg tggtcaacgc cgacggtaaa
     2761 acagatattg agcctctcct tgttgggttg gctaaagaac gtaaacaatg ggtaggagca
     2821 ttaaaaaatg tcaaaaaata acgtgaacat cgtcaccgtc attaacagca aaaatatcag
     2881 cacagaatct attgacggag atcaacacct gattatccgc ggcgttgtgc cgattgttga
     2941 tgatgttgtg atgaacgacg gactttatcc tgcggatgaa atcaataaaa gctacaacag
     3001 cttagagggc aactttatgc cgcttgggca tccaaaaatc gaaggtaaat acgtttcagc
     3061 ccaagatgtt cgagcggtga acaaacatca cgtcggtgcg tgggcgaaga acgtacgcaa
     3121 ggaaagtggc aaagtgctgg tcgatatgta tatcaaccgc cgctttgcgg aaggttcaga
     3181 acagggcaaa accttgcttg aacgacttga cggaatggtg acaaacacca acgctgaacc
     3241 tattcacgtt tccacagggc tgattctaaa caaagtcaag caatcgggta aatccaaagg
     3301 caagaaatat agctggattg cgacaaatat gtcgttcgat catattgcaa tattgcttga
     3361 tgtgccgggc gcggcgacac ctgatgatgg cgtggggatt tttgtaaacc aagacggaag
     3421 cgaaatgggg gtggaaaatg taaacctaac acaagcggcg gattaccgca cagaaaagct
     3481 gtttgacaaa gtacgatttt acctgatggc gaactcagat ttatcgtttg aagaaattca
     3541 tcgcgcgctg cgtgaagcta ttcgccccga aggcaaagat aagtggtcat tttgggtcga
     3601 agctgtttac ccgaaatact tcatctattc ggacgataac agcggcaaga aatacaagcg
     3661 gagctatttt attgacgaaa atgacaatgt gcagctcact agcgaacctg tcgaagttgt
     3721 caagaagatt ggctacgaag aaattacaac caatgaggaa cataatccaa tgaaaaccaa
     3781 aatcttagcc gtgttgaatg cggcaaacgt gaaaacggaa ggcttaaatg acgatcagct
     3841 cttggaagcc tacaacaagc tgcaagcgga taagggtaaa gagcctgaaa agcctaaaaa
     3901 tgaagatgac agcgaaattg atgagaaaat caagaaagca gtcaatgccg cgattgagcc
     3961 actccagcaa gccttgcaag ctaatactga caaagagcaa gcagcaatgc gtgcggcggt
     4021 gaaagccaag ttcaatatga gcgatgccgc agtcaatgct ttgcaaggcg aggtattaac
     4081 tgagttgtat gcgcaaacgc aacaatcggt cggattaaac aataattcgg caaacggcaa
     4141 cggcgacaat caatgggatg gttactcact caaccaagag gagaaaggca atgagtaatg
     4201 taatttatcg cggttcggtc aagcgtgaac ctcaaacggt gaatatcgtg atcaacgata
     4261 cttcggcacc gggtgcagta gttaaactcc acaacggcaa attagaggcg gcggctgatt
     4321 taaaaggtcg ccgtttttta ttgggcaaca accgctttaa ggggcagaca atcgaacaag
     4381 cgtatgcgaa gggcgatact gcaacggcgt ttcgtttaga gcctgaacag gagtattacg
     4441 cgcaaattgc cgacggcact tataactttg gcgatgaact cacggtaaaa caagcgggcg
     4501 gcaaactgac caaagcggag acgggcgatg tagtgctatt tttcttcgac gaagaatcgc
     4561 agcgtgtaat cagtggcggc aaaggctatg ccgatgtcgt ggtggcaaac gcctacacta
     4621 aataagaggt aacaaagcaa tgttgaaatt cacaaaagaa caagaacgct tcgtgattaa
     4681 cgagcggatc aattacgaca aaaaacacgc gctaatggca gcaaattcgg cggggttatt
     4741 gggcaacgcg atgactttgc cgaaagatgt ctgggcggaa tgggatcgtg atgcagtgca
     4801 aattcagcgc gaagaattgg tggtgtttaa cgatttagcg ggcatttcaa aatcaatgcc
     4861 gattggcaaa cttattcacc atttccaaac ggtatctgat agcggttcgg ttaatatctc
     4921 attagacggt cgttcatcag cgaaaaccga taacgtggtg cttaactacc acggtacacc
     4981 gttgccgatt attgattcca ctttctcttt tggctggcgc gatatgtcgg cagctcaaag
     5041 cgaagggtat cagatcgacg gtgcagcacg cgcgaacagt ctccgcaagg tggctgaaaa
     5101 aatggaagat ctcgctttaa atggtgattc ctctattgtg gttggcaatg ccaagcttta
     5161 cggcttgcgt actgcgccaa atcgtatgac taacacacac aatctggatt tagccactgc
     5221 gacaccgaaa gaaatttacg atgtgttccg tgacttgatt agcaaattcc acgcgaagaa
     5281 ctactactct cctgtaacgc tttatgtgaa ctatggcgac tatttcgcaa tgagtacacg
     5341 tgattactcc gagcagaaat ccgaaggatc tatcttgaac aaagtgatga cgattccgca
     5401 aattgcgaaa atcgtgccag caagccgtgt accgcaaaat gaaattctcg gcttgtgcaa
     5461 gcgttcggat gtgtaccaag tgcttaacgg tatgccgtta gtgactcgtc cgattgcgcg
     5521 ccataatgaa accgatgatt actcgttcca aattatggca gccgttgccg tggagttcaa
     5581 attcgacgat aaaggcaatg ctggctatat ccagtacact aaatcctaag gcggtgcaaa
     5641 atgaagtggc tattaacaca cgatagccac gagttgaaga aaggcgatgt ttacgaaggc
     5701 gaaacattac cgctttggct tgtgggcaaa gctatcgaaa tcgaagaaaa atcctttgaa
     5761 gttgcaacgc cttctgatca cgctgacggc g
//
LOCUS       DANLXO010000129         5695 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.131, whole genome shotgun sequence.
ACCESSION   DANLXO010000129 DANLXO010000000
VERSION     DANLXO010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5695
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.131"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(3..1409)
                     /locus_tag="PXD69_002398"
     CDS             complement(3..1409)
                     /locus_tag="PXD69_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HDL6284542.1"
                     /translation="MKLTKIVLSVVAVIGAVAVGGSWYTGKQVEEKYQELVVQANNQL
                     KQLSGEFGANIELKDVQIDRHFFISNAKYRLEVDLGNGKKLDFVGNDKLHHGPLPLNR
                     LAKLNLAPVMMSAESKLQAPEALKKLMGEHIGTGFSNISYSGDVEGHFDISPIKHSDE
                     TGHIETTPIKVQYSYDQKLKGVDSTVELESLKIKAEEFDFQIQGIVYDVQTENNESYP
                     NLTLGKGSGKINAIEFKSKDGKLSQIKDVVVKGDNLLKGDRLISTGDLEAATFNIEGV
                     EMGKLKMDMAYDLDAKLTNDITPLLSNPQTLENEKTGELLLQLLAKSFKFHINNFSLE
                     NSKGKVDLALLLNMAQFDPQNLGNMQAVLQALSTSKFTSNINRQYAEDIIRQVSIVTE
                     KLGEEEAKAFAKQQVDAVFLNAGVEQYGLRKVDDNNVKIELTIDNGKVNLNGRELTED
                     ELQMALFMIVMGAGSLGQ"
     gene            complement(1459..2265)
                     /gene="trpA"
                     /locus_tag="PXD69_002399"
     CDS             complement(1459..2265)
                     /gene="trpA"
                     /locus_tag="PXD69_002399"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDL6284543.1"
                     /translation="MSRFDTLFTALKAKNEGAFVPFVTLCDPGFERSFEIIDTMIKNG
                     ADALELGFPFSDPLLDGPVIQAANKRALDGGYSTDSCFELIAKIRAKYPDIPIGLLLC
                     ANLIFVPTAEVFFQRCQQSGVDAVLIADLPVFAAQEFVPTAEKYGIQPVFICPPNADQ
                     NTIERIAQLTQGYTYLVSRAGVTSAENQAHASNLDNLVESLKQAGAAPILQGFGIAKP
                     EQVKEALRLGADGAISGSAIVKIIERNLADQANLLKELAEFVQVMKAATK"
     gene            complement(2267..3457)
                     /gene="trpB"
                     /locus_tag="PXD69_002400"
     CDS             complement(2267..3457)
                     /gene="trpB"
                     /locus_tag="PXD69_002400"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDL6284544.1"
                     /translation="MSDTLLNPYFGEFGGMYVPEILVPVLKELEQAFVDAQQDPTFQA
                     EFADLLKNYAGRPTALTLCRNLTKGSKTKLYLKREDLLHGGAHKTNQVLGQILLAKRM
                     GKTRIIAETGAGQHGVATALACAMLGMPCVVYMGAKDVERQSPNVFRMRLMGAEVIPV
                     QKGSCSLKDACCEAMRDWAANYDTTHYLIGTAAGPHPFPTMVREFQKMIGEEIKRQIL
                     AKEDRLPDAVIAAVGGGSNAIGMFADFIEEQSVKLIGVEPAGKGIETGEHGAPLKHGT
                     TGIYFGMKSPIMQDKDGQIEESYSISAGLDFPSVGPQHAYLNATGRAEYVSITDAEAL
                     EAFQALAKNEGIIPALESSHALAYALKMIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL
                     NGGE"
     gene            complement(3469..4221)
                     /locus_tag="PXD69_002401"
     CDS             complement(3469..4221)
                     /locus_tag="PXD69_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6284545.1"
                     /translation="MKIALVTGVTAGFGLAICKLLLQSGYKVIGTGRRAERLEELHLQ
                     FGDKFLPLAFDIQQPDEVEKALNSRPKAWQQIDLLVNNAGLALGLEPAQKADLNDWYQ
                     MIDTNIKGLVTMTRLVLPEMVERKSGHIINIGSIAGTYPYPGGNVYGGTKAFVKQFSL
                     NLRADLAGTKVRVSNVEPGLCGGTEFSNVRFKGDDEKAAKVYENVQFVRPEDVANIVL
                     WLNQQPEHVNINRVEVMPVAQTSSALNVARNI"
     gene            complement(4447..>5695)
                     /locus_tag="PXD69_002402"
     CDS             complement(4447..>5695)
                     /locus_tag="PXD69_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDL6284546.1"
                     /translation="SGSNQAFANWAQKKVKGKRGAKLMAAGLVFFTFIDDYFHSLAVG
                     AIARPVTDKFRVSRAKLAYILDSTAAPMCVLMPISSWGAYIITLIAGLLATHSITGYS
                     PLGAFMTMSAMNFYAIFAMIMVFFVAYFSFDIGSMARFERQAAHLAELDDEQIETKGH
                     VRDLILPIIALIVATVSMMMKTGADALAESGASFSILGAFENTTVGISLVVGGVAGLI
                     VATICIITSGNISFKNYVRAYGLGVKMMSGAITILFFAWTINGVVSDMQTGKYLSGLV
                     AESIGAEFLPAILFVLAAAMAFSTGTSWGTFGIMLPIGASMAVHSDPALIIPCLSAVM
                     AGAVCGDHCSPVSDTTILSSTGAQCNHMDHVISQLPYALLVATASIIGYLVVGFTQSA
                     VLGFIATAVVMAILILLFKEKKH"
BASE COUNT         1674 a         1305 c         1002 g         1714 t
ORIGIN      
        1 gattattgcc cgagtgagcc tgctcccatc acaatcataa acagagccat ttgaagttca
       61 tcttcggtca gttcacgtcc gtttaaattc acttttccgt tatctatagt taattcaatc
      121 ttcacattgt tgtcatctac ttttcttaat ccgtactgtt caactcccgc attgagaaaa
      181 acagcatcaa cttgttgctt ggcaaatgct ttcgcctctt cttcgcctaa tttttctgta
      241 actattgaga cttggcgaat aatatcttcc gcatattgac ggttgatatt tgaagtgaat
      301 ttacttgttg aaagggcttg caataccgct tgcatattac caagattttg tgggtcaaat
      361 tgagccatat tcagtaataa agccaaatca actttgcctt tgctgttttc aagtgagaaa
      421 ttattaatat ggaatttaaa tgattttgct aatagttgta ataataactc gcctgttttt
      481 tcattttcta atgtttgagg attagataat aaaggcgtaa tatcattggt taatttagca
      541 tctaaatcgt atgccatatc catttttaat ttacccattt caacaccctc aatgttgaaa
      601 gtggctgcct ctaaatctcc ggtagaaatt aaacgatcgc cttttaatag attatcgccc
      661 ttcaccacaa catctttaat ttgagataat ttgccatctt tagacttaaa ctcaatagcg
      721 ttaatttttc cactaccttt gcctaaagtt aaattaggat aactttcatt attttctgtt
      781 tgaacatcat aaactatacc ttgaatttga aaatcaaatt cttctgcttt tatcttaaga
      841 ctttctagct caacagtgct atcaacccct tttaattttt ggtcgtagct atattgcact
      901 ttgattggcg tggtttcaat atgacctgtt tcatcactat gtttaatcgg ggaaatatca
      961 aaatgccctt ccacatcgcc cgaatagctg atattagaaa aaccggtgcc aatatgttca
     1021 cccatcaatt ttttaagggc ttcaggagct tgtaatttgc tttccgcact catcattaca
     1081 ggagctaaat taagtttcgc taaacgatta agcggtagcg gaccgtgatg aagtttatca
     1141 ttaccaacaa agtccaattt cttaccatta cccaaatcca cttctaaacg atatttcgca
     1201 ttagagataa agaaatggcg atcgatctgc acatctttaa gctcaatatt cgcaccaaat
     1261 tcgccactca gttgtttaag ttggttatta gcttgaacaa ccaattcttg atatttttct
     1321 tcaacctgct tacctgtgta ccaacttccg ccaactgcaa cagcaccaat taccgctaca
     1381 actgaaagaa caatttttgt taatttcatt ctgtttcctt ttattttcaa aaaaatttaa
     1441 aaaatgaccg cttgtagttt acttcgtagc cgctttcatc acttgtacaa attcggcaag
     1501 ttctttgagc aaattagctt ggtcagctaa attacgttca ataattttca caatcgctga
     1561 gcctgaaatc gccccgtctg ccccaagcct taacgcctct tttacctgtt caggtttggc
     1621 tatgccaaaa ccttgtaaga taggggcagc tccggcttgt tttaaacttt ccactaaatt
     1681 atccaaatta cttgcgtgag cttggttttc agcactagtt acaccggcac gggaaactaa
     1741 ataagtgtag ccttgggtta attgagcaat ccgttcaatg gtgttttgat cagcattcgg
     1801 cgggcaaata aacaccggct gaattccata tttttcagcg gttggcacaa actcttgagc
     1861 agcgaaaaca ggcaaatcag caatcaacac cgcatcaact ccactttgtt ggcaacgttg
     1921 gaaaaatact tctgcggttg gcacaaaaat taaattggca cacagtagta aaccgatagg
     1981 aatgtctgga tatttagctc gaattttggc aatcagctca aaacagctat cagtgctata
     2041 gccaccatct aaagctcgtt tattcgctgc ttgaatcacc ggcccgtcta agagggggtc
     2101 agaaaacgga aagcctagct ctaaagcatc agccccgttt ttaatcatcg tgtcgataat
     2161 ctcaaaactg cgttcaaaac caggatcgca taatgtcaca aacggcacaa aagccccttc
     2221 gttttttgct tttaatgcag taaatagcgt atcaaagcgg ctcattttac tctcctccat
     2281 ttaaaatttt atccacggtg aaaatgtctt tatcgcctcg acccgataaa ttcaccacta
     2341 ataactgctc tttttcaggg ttctgcttaa tcatttttaa cgcataggct aaggcgtggg
     2401 aagattctaa cgccggaata atcccctcat ttttggctaa tgcttggaat gcctctaaag
     2461 cctctgcatc ggtaatcgat acatattcag ctcgccctgt cgcatttaaa taagcgtgtt
     2521 gcggcccgac agaagggaaa tctaagccgg ctgaaatgga gtaagactct tcaatttgcc
     2581 cgtctttatc ctgcataatc ggcgatttca taccgaaata gatccccgtt gtgccgtgtt
     2641 tgagcggtgc accgtgttca ccggtttcaa ttccttttcc tgccggctca acaccgatca
     2701 atttgacgga ttgctcttcg ataaaatctg caaacatacc gatagcattt gagccaccgc
     2761 ctacggcagc aatcaccgca tcaggcaagc ggtcttcttt tgctaaaatt tgacgtttga
     2821 tctcttcgcc aatcattttc tgaaattcac gcaccattgt cgggaacggg tgcgggccgg
     2881 ctgcagtgcc gattaggtaa tgggtagtat cataatttgc cgcccaatcc cgcattgcct
     2941 cgcaacaggc atctttgagc gagcaagagc ctttttgtac cggaatcacc tccgctccca
     3001 ttaaacgcat acggaataca tttggcgatt ggcgttctac atcttttgcg cccatataca
     3061 ccacgcaagg cattcctaac atcgcacacg ctaatgcggt tgccacaccg tgctgtcctg
     3121 ctcctgtttc ggcaataatg cgggttttac ccattcgttt agcgagtaag atttgcccta
     3181 gcacttggtt ggttttatgt gccccaccgt gtaaaagatc ttcacgtttt aaatagagtt
     3241 tggttttact gcctttggtt aaattacgac aaagggttaa agcagtcggg cgaccggcat
     3301 agtttttgag taaatcggca aattcagctt ggaatgttgg gtcttgctga gcatctacaa
     3361 aggcttgttc taattctttt agcaccggca ctaaaatttc cggcacatac ataccaccaa
     3421 attcaccaaa ataaggatta agaagtgtgt ctgacataat atttcctttt aaatatttct
     3481 cgctacattt aaggcagaag aagtttgagc caccggcatc acttcaaccc gattaatatt
     3541 aacgtgttca ggttgctgat tcagccaaag cacaatattt gccacatctt ccgggcgcac
     3601 aaactgcacg ttttcataaa ctttagccgc tttttcatca tcgcctttaa agcgtacatt
     3661 tgaaaattcc gtaccgccac atagccccgg ctcaacattg gaaacacgca ctttagtgcc
     3721 ggctaaatct gcccgcaaat ttaggctaaa ctgtttcacg aaggctttag taccaccata
     3781 tacattaccg cccgggtaag ggtaagtgcc ggcaatcgag ccgatattaa taatatgccc
     3841 acttttccgc tccaccattt caggcaaaac taagcgtgtc atcgttacca atcctttaat
     3901 attggtatcg atcatttgat accaatcgtt caaatctgct ttctgtgccg gttctaagcc
     3961 gagtgcaagg cctgcattgt ttactaataa atcaatttgt tgccacgctt tagggcggct
     4021 attcagtgct ttttccacct catcgggctg ttgaatatca aatgcaagcg gtagaaattt
     4081 atcgccaaat tgtaaatgca gttcttctaa acgctctgcc cgtctgcccg tgccaattac
     4141 tttataaccc gattgaagca ataatttaca aattgccaac ccaaatccag cagttactcc
     4201 tgtgactaat gctattttca tcttttcacc ctcaaattta aaatgtacta ttaaagtagt
     4261 acaaaaaaat taaaattgca agaaataata ttgccataaa agaaaaaagc gtaccaaaag
     4321 gtacgctaat gctaggagga tcttatttta agatttatat aacacaacat tcgatatcca
     4381 tatcttgagt gctattttat ctcatcaata aatctcattc tgtgattccc ttcacatttt
     4441 cggaaattaa tgcttttttt ctttaaaaag caaaatgagt attgccataa caacagctgt
     4501 agcaataaat cccaataccg ctgattgggt aaagccaacc actaagtaac caataataga
     4561 agctgttgca actaataaag cataaggtaa ttgagaaatg acatgatcca tatgattaca
     4621 ttgtgcgcct gttgaagaaa gaatagtggt atcagatact ggagaacagt gatcaccaca
     4681 aaccgcacca gccattactg cagataaaca aggaataatt aatgctggat ctgaatgcac
     4741 tgccattgag gctccaattg gcaacataat accaaatgtt ccccagctag ttcctgttga
     4801 aaacgccatt gctgcggcta acacaaatag aattgcaggt aaaaactctg ctccaatgct
     4861 ttctgcaacc aatcctgata gatatttccc tgtttgcata tcacttacta cgccgtttat
     4921 tgtccacgca aagaagagaa tagtgattgc accagacatc atcttcacac ctaagccata
     4981 agcacggacg taatttttaa aagaaatatt accgcttgta atgatacaaa tagttgcaac
     5041 tataagccct gccacaccac caacaactaa tgaaatgcct accgtagtat tttcaaaagc
     5101 acctagtata gaaaatgaag cacctgattc ggccagtgca tctgcacctg ttttcatcat
     5161 cattgagact gtagcaacaa taagtgcaat aattggcaaa atcaaatcgc gcacgtgtcc
     5221 tttcgtttca atttgctcat catctaattc tgctaaatgc gctgcttgac gttcaaaacg
     5281 cgccatcgaa ccaatatcaa atgagaaata tgccacaaag aacaccataa tcatcgcaaa
     5341 aatggcgtaa aagttcattg cgctcattgt cataaatgcg cctagtggcg aatagcctgt
     5401 gatggaatgc gtagccaata agccagctat taaggtaata atataagccc cccagcttga
     5461 aattggcatt aacacgcaca ttggagcggc ggtagaatct aaaatataag ctaatttagc
     5521 acgagaaaca cggaatttat ccgtaacagg gcgggcaatc gcacctactg ctaaactgtg
     5581 gaaatagtca tcaataaagg taaagaaaac caaacctgcc gccattaatt ttgcgcctcg
     5641 tttgcctttt acctttttct gcgcccaatt cgcaaacgcc tgattactac ctgaa
//
LOCUS       DANLXO010000130         5591 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.132, whole genome shotgun sequence.
ACCESSION   DANLXO010000130 DANLXO010000000
VERSION     DANLXO010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5591
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.132"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            76..594
                     /gene="hutZ"
                     /locus_tag="PXD69_002403"
     CDS             76..594
                     /gene="hutZ"
                     /locus_tag="PXD69_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein HutZ"
                     /protein_id="HDL6284547.1"
                     /translation="MTTNRQEVLQNRLGPEIEELKQQIKTIMLATIDKDGVPNVSYAP
                     FVINNGEYQVLITTIARHARNLQEVPKVSLMLIEDESKSRQIFARRRLTFDATVRMIE
                     RTDEEWNNSIAALKARHGDLVDELSNMQDFKLFSFKPTAGLFVKGFGKAFDVGVDDLI
                     NVVHLDQGHQTA"
     gene            744..3356
                     /gene="pepN"
                     /locus_tag="PXD69_002404"
     CDS             744..3356
                     /gene="pepN"
                     /locus_tag="PXD69_002404"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HDL6284548.1"
                     /translation="MQPKAKLRKDYRAPDFTITDIYLDFQLDPDRTFVTSKLTVVRKN
                     PEATTLRLDGHSFDFLSLKYNGEPFSAFQKDDESLTLNLADVPAERFELEIETALNPA
                     QNTSLQGLYKSGDGFCTQCEAEGFRQITYMLDRPDVLAKYTTKITASKSKYPYLLSNG
                     NHIAQGDLHDGRHWVEWQDPFFKPSYLFALVAGDFDLLQDKFITKSGREVTLEIYVDR
                     GNLDRAPWAMESLKRSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKF
                     VLAKPETATDTDYLDIEAVIAHEYFHNWTGNRITCRDWFQLSLKEGLTVFRDQEFTSD
                     LWSRSAKRIEDVRLLRTVQFAEDASPMAHPIRPEKVIEMNNFYTVTVYEKGAEIIRMI
                     HTLLGEEKFQQGMQLYVARHDGSAATCEDFVKAMEDASGVNLEQFRRWYSQSGTPELT
                     ISDEYDETRKAYRLHISQMTPATHDQMDKLNLHIPLKVALYGEQDGKRIPLQYELLTV
                     SDVLDVTAEHQTFEFHNVTQRPVPALLCDFSAPVRLDYNYTTEQLLTLLKHAENDFVR
                     WDAAQMLYTNELRENLSRYQQHQPLSFSEGLVNALTFVLDNSASLPELTALTLTLPKE
                     TEFAESFKTIDPQGIAVVREFMQHSIAHALQDKLLAVYHQNQCGEYQVVAEDIAKRAL
                     RNACLSYLAFTDLGNALVHKHYNNADNMTDTLAALQAATKAQLSCRDALLADFEQKWK
                     HDGLVMDKWFMLQATRPDDDVLSIVQNLMEHPSFNFNNPNRLRSLVGAFCGQNPKAFH
                     AIDGSGYRFLVDTLIKLNESNPQVAARLIEPLIKLSRYDNQRQTLMRRGLERLRELDN
                     LARDLFEKIEKALD"
     gene            complement(3416..3688)
                     /locus_tag="PXD69_002405"
     CDS             complement(3416..3688)
                     /locus_tag="PXD69_002405"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDL6284549.1"
                     /translation="MVAKLFSVYGRVQGVAFRFFTLQEANRLGIKGYVRNRDDGSVEV
                     VAEADEQTIAQLENWLQQGSPAAKVERVIVSDYLGSERFKRFEVRY"
     gene            complement(3742..5376)
                     /locus_tag="PXD69_002406"
     CDS             complement(3742..5376)
                     /locus_tag="PXD69_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700110.1"
                     /note="is involved in the transport of the murein peptide
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HDL6284550.1"
                     /translation="MQSKFSLSLLTTSLVLGLSANVFAAKVPEGTTLAEKQEITINNG
                     FEPSSFDPHKIEGVPESQVAYQLFEGLVTKDSDGNIQPGVAESWENTPDYKTWTFKLR
                     QDAKWSNGDAVTAHDFVFAWQRLVNPLTASPYSSYLTYLNVENAQDIIDGKKKPEELA
                     VKAIDDHTFQVQLSQPVPYAVELATHSSLLPVHKATVEKHGDAWVQKGNLVGNGAYTL
                     ADHVINEKIVFERNKNYWNDKETVINKATFLAIANAATDVSRYRAGDLDMTNYALPPE
                     QFATLKKEIPNEVFTARTLSTYYYEINHKRAPFDNVKVREALNLALDRTIITDKVLGQ
                     GQTPTYVFTPPYIHEGEKIQQPAYSKDSMADRKAKALKLLEEAGYSKANPLKFTILYN
                     TNDNHKKIAIAVSSLWKQGTDGIVDVKLENQEWKTFLDTRRNANYDVSRAGWSADYNQ
                     ATTFVNYFLSNSSNNTAFYKSQAYDDAVAESYKATDAAGRAAAYAKAEEQLAKDYAII
                     PIYNYVNPRLVKPYVKGYEGKDPQDDILLRNLYIVK"
BASE COUNT         1640 a         1191 c         1105 g         1655 t
ORIGIN      
        1 atgattctca tatggattga aagttttcac tctttatagt aatctaaaaa aacactattt
       61 aaattgaggt attttatgac aaccaaccgt caagaggtct tacaaaaccg tttaggtcca
      121 gaaattgaag aattaaaaca acaaatcaaa actataatgc ttgcaaccat agataaagat
      181 ggtgtaccga atgtgagcta tgcccctttt gtaattaata acggcgaata tcaagtctta
      241 atcactacta ttgcccgtca cgctcgtaat ttacaagagg tgccaaaagt ctctttaatg
      301 ctaattgagg atgaaagtaa gagccgtcaa atttttgccc gtcgtcgctt aacctttgac
      361 gcaacagtgc gaatgattga acgtactgat gaggaatgga ataatagcat tgcagcactt
      421 aaagctcgtc acggcgattt agttgatgaa ctgtcaaata tgcaagattt caagctcttt
      481 agctttaagc caacggcagg cttatttgta aaaggatttg gtaaagcctt tgatgttggt
      541 gttgatgact taattaatgt cgttcattta gaccaaggcc accaaactgc ctaattgcga
      601 aataaactca cggctataaa taatcctatt tatagccgtt tttattgcga caagcggtca
      661 aattttttgg aaaatttacc gctattttag tacaataacg acactattct atgagctaaa
      721 cgcaactaaa aaaaggaaat cctatgcaac ctaaagcgaa actcagaaaa gattatcgag
      781 ctcccgattt cactattact gatatttatc ttgacttcca acttgaccca gatcgcactt
      841 ttgtcacctc aaaactaact gtcgtgcgta aaaatcctga ggcgacaaca cttcgtttag
      901 acggtcatag tttcgatttc ctttcgctta aatataacgg cgagccgttt tccgcctttc
      961 aaaaagatga tgaatcttta accttaaatt tagccgatgt gcctgccgag cggttcgagc
     1021 ttgaaattga aaccgcatta aatccggcac aaaacacctc gttacaaggt ttgtataaat
     1081 cgggcgacgg gttttgcacc cagtgtgagg ctgaaggttt ccgccagatt acctatatgc
     1141 tcgaccgccc tgatgtactt gcaaaatata cgacaaaaat caccgctagt aagagcaaat
     1201 acccgtatct gctttctaac ggcaaccaca ttgcccaagg cgacttgcac gatggcagac
     1261 actgggtgga atggcaagat ccgttcttta aaccaagcta tttatttgcc ttggttgcgg
     1321 gggattttga cttactccaa gataaattca tcaccaaaag cggacgtgaa gtcacgcttg
     1381 aaatttatgt cgatcgtgga aatttagacc gtgcaccttg ggcgatggag agcttaaaac
     1441 gttcaatgaa atgggatgaa gagcgtttcg gtttggaata cgatttagat atttatatga
     1501 ttgttgccgt tgatttcttc aatatgggag caatggaaaa caaagggtta aatattttca
     1561 attccaaatt tgtattggca aaaccggaaa ccgcaaccga tacggattat ttagatattg
     1621 aagcggtgat tgcccacgaa tacttccata attggacggg caaccgcatt acctgccgtg
     1681 attggttcca actaagctta aaagagggct taaccgtctt ccgtgatcag gaatttacct
     1741 ccgatttatg gtctcgttcg gcaaaacgga ttgaagatgt gcgtttactg cgtaccgtac
     1801 aatttgccga agatgccagc ccgatggctc acccgattcg cccggaaaaa gtgattgaaa
     1861 tgaataattt ctacaccgtg actgtgtatg aaaaaggggc ggaaattatt cgtatgattc
     1921 acaccctgtt aggcgaagaa aaattccagc aaggtatgca actttatgtg gcaagacacg
     1981 atggttctgc ggcaacttgt gaagatttcg ttaaagcaat ggaagatgct tcaggcgtta
     2041 atcttgaaca attccgccgt tggtatagcc aatccggcac gcctgagctc accatttccg
     2101 atgaatatga tgaaacccgc aaggcatacc gcttgcatat ttcacaaatg acaccggcaa
     2161 cccacgatca gatggataaa ctcaatctgc atattccgct taaagtagcg ttatatggtg
     2221 aacaggacgg taaacgcatt ccgttacaat atgaattatt gaccgtaagc gatgtgttag
     2281 atgtaaccgc agaacaccaa acctttgagt ttcataatgt aacacaacgc ccggtgcctg
     2341 cattactgtg tgatttctct gcaccggtac ggttagatta caactatacc accgagcagc
     2401 ttttaacctt actcaaacac gctgaaaatg attttgtacg ctgggatgca gctcaaatgc
     2461 tctataccaa tgaactgcgt gaaaatttaa gccgttatca gcaacatcaa ccactcagct
     2521 tctcagaagg gttggtgaat gccctaacgt tcgtgttgga taactcagca agcctgccgg
     2581 aactaactgc attaaccctc acattgccaa aagaaaccga gtttgcagaa tcgttcaaaa
     2641 ccattgaccc acaaggtatt gcggttgtgc gtgaatttat gcagcattcc attgctcacg
     2701 ccttgcaaga taagttatta gcggtatatc accaaaacca atgcggggaa tatcaagtcg
     2761 tggctgaaga tattgctaaa cgagccttgc gtaatgcttg cttaagctat ttagccttta
     2821 ctgatttagg caacgcgttg gtgcataagc attacaataa tgccgataat atgactgata
     2881 cgcttgctgc attacaagcc gcaaccaaag cccagctaag ttgccgtgat gcattattag
     2941 ccgattttga gcaaaaatgg aaacatgatg gtttagtgat ggataaatgg tttatgctac
     3001 aagccacccg accggacgac gatgtgttat ccatcgtgca aaatttaatg gaacacccaa
     3061 gttttaactt taataacccg aaccgtttac gttcattagt aggtgcattc tgcggtcaaa
     3121 acccgaaagc cttccacgcc attgacggtt caggctatcg tttcttggta gatacgctga
     3181 ttaaacttaa cgaaagtaac ccacaagttg ctgctcgact tattgagccg ttaattaaac
     3241 tctcacgcta cgataaccaa cgccaaacct tgatgcgtcg tggtctagaa cgcctgcgtg
     3301 agctggataa tttagcacga gatctgtttg agaaaattga aaaagcgtta gattaaacca
     3361 agcaatacaa gcggtgtcgt ttgcaaattt ttttacaaat gacaccgctt gttagttaat
     3421 accttacctc aaacctttta aacctttctg agccaagata atcgctcaca attacccgtt
     3481 ccacctttgc agcaggtgag ccttgttgta accaattttc cagttgagcg attgtctgtt
     3541 catccgcttc agctaccact tctaccgagc cgtcatcacg atttctgaca tagcctttta
     3601 tgcctaatcg attcgcttcc tgcaaggtaa aaaaccgaaa agcgacacct tgaacccgtc
     3661 cgtaaaccga gaataatttt gcgaccattc ttcccccata aaaataggct gcttattttt
     3721 caataaacag cccataatgt cttatttcac gatgtagagg ttacgcagta aaatatcatc
     3781 ttgcggatct ttaccctcat agcctttcac gtaaggtttc accaaacgtg ggtttacata
     3841 gttataaatc ggaataatcg cataatcttt ggctaactgc tcctctgctt ttgcataagc
     3901 agctgcacga ccagctgcgt ctgtcgcttt gtaagattct gctaccgcat catcataagc
     3961 ttggctctta taaaacgcag tattgttgct ggagttcgat aagaaatagt tcacaaaggt
     4021 ggttgcttgg ttatagtctg ccgaccaacc tgcacgagaa acatcataat ttgcattgcg
     4081 gcgggtatct aagaatgttt tccactcttg gttttctaat ttcacatcaa caatgccgtc
     4141 tgtgccttgt ttccataatg atgaaactgc aatcgcaatt ttcttgtggt tgtcgttggt
     4201 attataaaga atagtaaatt ttaacgggtt cgctttactg taaccggctt cttccaataa
     4261 tttcaacgct ttggcttttc tatctgccat tgaatctttg gaataagcag gttgctggat
     4321 tttttcaccc tcgtgaatat aaggcggtgt aaatacataa gttggtgttt gaccttgtcc
     4381 tagcacttta tcggtaataa tggtgcgatc taaagctaag tttaacgcct cacgcacttt
     4441 cacattatca aacggtgctc gtttatggtt aatttcatag taataagtag aaagggttct
     4501 tgccgtaaac acttcgtttg gaatctcttt tttcaaggtt gcaaactgct ccggtggaag
     4561 agcatagttg gtcatatcca aatcaccggc acggtaacgt gaaacatcag ttgcggcatt
     4621 agcaatggct aagaaagtcg ctttattaat cacggtttct ttatcattcc aataattttt
     4681 attacgctca aacacgattt tttcattaat aacgtgatcg gctaaggtat aagccccgtt
     4741 tccaaccaga ttgccttttt gcacccacgc atcgccgtgt ttctcaacgg ttgctttgtg
     4801 tacaggtaat aaagaagagt gtgttgccag ctcaactgca tacgggacag gttggcttaa
     4861 ctgcacctgg aaagtatgat catcaatcgc tttaactgct agttcctccg gttttttctt
     4921 gccgtcaata atatcttgag cattttctac attgagataa gttaaatagc ttgaataagg
     4981 tgaagccgta agtggattaa ccaaacgctg ccaagcaaat acgaaatcgt gagcagttac
     5041 ggcatcaccg tttgaccatt tagcgtcttg gcgtaatttg aacgtccacg ttttgtaatc
     5101 cggtgtattt tcccaacttt ctgccacacc cggctgaata ttgccgtcag aatctttcgt
     5161 taccaatcct tcaaataact gataagcaac ttgcgattcc ggcacgccct caattttatg
     5221 tggatcaaaa cttgatggct caaaaccatt attaatcgta atttcttgtt tttctgcaag
     5281 cgttgttcct tcaggcactt tggctgcaaa cacatttgcc gataagccta acactaatga
     5341 ggttgttaat aaggaaagcg agaattttga ctgcatattt gatctccatt gatgaatatt
     5401 ggcttgcaac cagccgattt gttctaatta atttttttaa gtctaggcat tattattttg
     5461 attgcaagga atttttttaa aaaatgtgat agatatcacc tttcaatgca aaaattgcat
     5521 aaaaaaatcc cgaagaaaat agctctataa actctgataa tggctagata acttgctgta
     5581 actttctaat t
//
LOCUS       DANLXO010000131         5505 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.133, whole genome shotgun sequence.
ACCESSION   DANLXO010000131 DANLXO010000000
VERSION     DANLXO010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5505
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.133"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(125..640)
                     /locus_tag="PXD69_002407"
     CDS             complement(125..640)
                     /locus_tag="PXD69_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL6284551.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GARREVTEWHRIVFYRRQAEVCGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQG
                     DVLQMLGSRQGNDMGGQQGGWGNSAPAGNSYNQGNSNYGYNQTQSAAPQSKPAPQPEP
                     AMNNFDDDIPF"
     gene            795..3623
                     /gene="uvrA"
                     /locus_tag="PXD69_002408"
     CDS             795..3623
                     /gene="uvrA"
                     /locus_tag="PXD69_002408"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDL6284552.1"
                     /translation="MQHIDIRGARTHNLKNINLTLPRDKFIVITGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLAPVVKERKG
                     EHVKLLENLTASGYLRARIDGEICDLSDPPALELQKKHTIEVVVDRFKVRADLATRLA
                     ESFETALDLSGSTAIIADMDDPNAEEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGA
                     CPTCDGLGVEQFFDAKKVVQNEEVSLAAGAIKGWDRRSFYYFGLLKAVAEHYGFDLET
                     PFGQLPKKYQNIILNGTKEEIEFVYVNDRGDKVKRKHAFEGVLNNMARRYKETESNSV
                     REELAKYINNRPCMDCEGSRLRREARYVFLDKTNLPMVSEKSIGEALTFFEELKLAGQ
                     KEKIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVM
                     YVLDEPSIGLHQRDNERLLNTLVHLRNLGNTVIVVEHDEDAIRAADHIVDIGPGAGVH
                     GGQVIAQGTAAEIMQIEESITGQFLSGKQKIEIPAQRVPYEPTKLLTLSGASGNNLKK
                     VKLEIPVGLFTCITGVSGSGKSTLVNDTLFPLAQNALNRAENSDVAPYESIDGLSHFD
                     KVIDIDQSPIGRTPRSNPATYTGLFTPIREIFAGTQEARARGYNVGRFSFNVRGGRCE
                     ACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLEMTVEEAREF
                     FAPMPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILD
                     EPTTGLHFADIKQLLGVLHRLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI
                     IATGTPEEVAKDKRSHTARFLKEILAKG"
     gene            complement(3715..5448)
                     /gene="dauA"
                     /locus_tag="PXD69_002409"
     CDS             complement(3715..5448)
                     /gene="dauA"
                     /locus_tag="PXD69_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HDL6284553.1"
                     /translation="MLNKWFLTKNAFLAVKPFSALKDALNAGYGKQHLIRDIISGLTV
                     GVIAIPLSMALAIASGVPPQHGLYTAIVAGIVIALTGGSRFNISGPTAAFVVILYPVT
                     QQFGLSGLLMATMLSGGILVLMALLRLGRLIEYIPLPVTLGFTCGIGIVIATLQIKDF
                     LGLSIEKMPEHYLGKLEAIFSALPTINWADTLVGVVTLLVLTRWHKLRLPIPGHLPAV
                     FIGTLLSLLLIHFGQNVATIGSAFHYTLSDGTTGYGIPSVLPEFVLPWNLPNAEGNRI
                     DWNLTTIQALLPAAFSMAMLGAIESLLCAVVCDNMTDTKHHSNNELLAQGLGNIASPF
                     LGGITATAAIARSAANVRSGAVSPISSVVHALLVLFALLFLAKALSYLPLSSMAALLL
                     VVAWNMADIPQIIQLTRRSGKNEIAVLLTCITLTVLFDMVIAITVGVLLASLLFIRTI
                     AEMTKSFEMAHPTDLNDVLVYRISGPLFFAAADNLFADLHNKTVHTDHQIKHIVLQCD
                     AVTVLDAGGIHALTRFVQHMLPHQQLHLCNVQFQPMRMLVRSQKTVNEIPQIQFSSDL
                     ESAFDKIRQAN"
BASE COUNT         1583 a         1148 c         1287 g         1487 t
ORIGIN      
        1 cacttattac ttggaagtgt tccctattat tttgagtaag gtaggggcgc tttatatgag
       61 tagcttttta tttcatcgaa atgcggtgta tggaacccat gagctactta agtcaatact
      121 ttgattagaa cggaatatca tcatcaaaat tgttcattgc cggctcaggc tgtggtgccg
      181 gtttagattg cggtgcagca ctttgggttt ggttgtaacc ataattgctg ttgccttgat
      241 tgtagctatt acccgcagga gcagaatttc cccaaccgcc ttgctgaccg cccatatcat
      301 taccttgacg gctgccgagc atttgtagca catcgccttg aatttcggtg gtgtaacgat
      361 cttgcccgtt ttggtcttgc catttacggg tttttaaacg tccttctacg taaacttgag
      421 agcctttacg taaatattgc ccgcatactt ctgcttgacg gcggtagaat acaatacgat
      481 gccactcggt tacttcacgg cgtgcaccgg tgtttttatc cgtccagctt tctgaggttg
      541 ccacactaat atttgcaacc gcttcgccat ttggcattgt acgcatttca gggtcgttac
      601 ctaaattacc gacaataatt actttattga taccagccat aaaatcctct gtttgataaa
      661 ttaaactaaa atttgctaag tattctacct gaaaatccaa aagatgaaca ccaaaaaact
      721 gatattttgt acagttttat taaaatatgc gataatgatc gaaaattgag aaaatagcac
      781 tggacattaa aaatatgcaa catatcgata ttcgtggagc aagaacacac aacttaaaaa
      841 acatcaattt aaccttgccg agagataaat tcattgtaat taccgggctt tccggctcgg
      901 gcaaatcgtc tctggcgttt gatacgctct atgcggaagg acaacgccgt tatgtagaat
      961 cactgtctgc atacgcccgc cagtttctct ccttaatgga aaagcctgat gtggatcata
     1021 ttgaagggct ttcccctgcg atttcgattg agcaaaaatc aacctctcac aacccacgtt
     1081 cgaccgtagg aacggtaacg gaaattcacg actatttacg tttattgttt gctcgagtgg
     1141 gcgagcctcg ttgccctgac cacgatgtgc cattggctgc tcaaactatt tcgcagatgg
     1201 tggatcgagt attggaagaa ccggaaggaa aacggttgat gctacttgcc cctgtggtga
     1261 aagagcgtaa aggcgaacac gtaaaattat tggaaaattt gaccgctagt ggctatttgc
     1321 gggctagaat tgacggtgaa atttgcgatt tatccgaccc accggcatta gaattacaga
     1381 aaaaacacac cattgaagtg gtggtggatc gctttaaagt aagggctgat ctagccaccc
     1441 gtttggcgga atcttttgaa acagcgttag atttatccgg ctctaccgca attattgcag
     1501 atatggacga cccaaatgcc gaagaaattg tgttttcgtc cagctttgct tgtccgcatt
     1561 gtggttactc tttacacgaa ttagaaccac gccttttctc gtttaacaac ccggcaggtg
     1621 cttgcccgac ttgtgatggt ttgggcgttg agcagttttt tgatgccaaa aaagtagtgc
     1681 aaaatgaaga ggtttcatta gccgccggtg cgatcaaagg ctgggatcgc cgcagtttct
     1741 actattttgg cttattaaaa gccgttgccg agcattatgg ctttgattta gaaaccccat
     1801 tcgggcagct accgaaaaaa tatcaaaaca ttattttaaa cggcactaaa gaagagattg
     1861 agtttgttta tgtcaatgac cgaggcgata aggtcaaacg taaacacgct tttgaagggg
     1921 tgctgaataa tatggctcgc cgctataaag aaaccgaatc aaactcggtg cgtgaagagt
     1981 tggcgaagta tattaataat cgtccttgta tggattgcga aggctcacgg ttacgccgtg
     2041 aagcccgtta tgtattctta gataaaacca atttgccgat ggtttcggaa aaaagtatcg
     2101 gcgaggcatt aacctttttt gaagagctga aattagccgg tcagaaagaa aaaattgctg
     2161 agaaaatcct caaagaaatt cgtgaacggc tacagttttt agtgaatgtc ggcttgaatt
     2221 atctttctct ttcccgctcg gcagaaaccc tttcaggtgg cgaggctcag cggattcgcc
     2281 ttgccagcca aattggtgcg ggtttagtag gggtaatgta tgtgctggat gagccttcca
     2341 tcggcttgca ccaacgagac aatgaacgcc tactgaatac tttggtgcat ttacgcaatt
     2401 taggcaatac cgtgattgtg gttgaacacg atgaagatgc gatccgagcc gcagatcata
     2461 tcgtggatat aggcccgggt gccggtgtac acggtgggca agttatcgca caaggtacgg
     2521 cagctgaaat tatgcaaatt gaggaatcta ttaccggaca attcctctca ggcaagcaaa
     2581 aaattgagat tccggctcag cgtgtgcctt atgagccaac taaattgctc accttatcgg
     2641 gagcaagtgg taacaacttg aaaaaagtga aattagagat tccggttggt ttatttactt
     2701 gtatcacggg tgtatcaggt tcgggcaaat caactttagt taatgacaca ctattccctc
     2761 tggcacagaa tgcgttaaac cgagcggaaa acagcgatgt tgctccttat gaatcgattg
     2821 acggcttatc gcattttgac aaggtaattg atattgacca aagcccgatt gggagaactc
     2881 ctcgctcaaa tccggcaact tacaccggat tatttacgcc aattcgtgag atttttgccg
     2941 gcacgcaaga agctcgagcc agagggtata acgtagggcg gtttagcttt aatgtgcggg
     3001 gcggacgttg cgaagcctgt caaggtgacg gcgtgattaa agttgaaatg cacttcttgc
     3061 ctgatgtgta tgtgccttgc gatcactgta aaggcaaacg ctataaccgt gaaaccttgg
     3121 aaattcgcta taaaggcaaa actattcacc aagtgttaga gatgacggtg gaagaggcga
     3181 gagaattttt tgcccctatg ccgatgattg cccgcaagtt gcaaaccttg atggacgtgg
     3241 ggttatctta tatccgttta gggcaatctt ctactacgct ctcaggcggt gaagcccaac
     3301 gggtgaaatt ggcgaccgag ctttccaaac gagacaccgg caaaacgctc tatattttag
     3361 atgaaccgac caccggcttg cattttgccg atattaaaca gttactcggc gtgctacatc
     3421 gcctgcgtga tcaaggcaat acgattgtgg tgatcgaaca taatttagat gtgattaaaa
     3481 ccgcagactg gattgtcgat cttggccctg aaggtggcag tggcggcggt gaaattattg
     3541 ctaccggcac accggaagaa gtggcaaaag acaaacgttc tcacaccgca cgcttcttaa
     3601 aagagatttt ggctaaaggc taacgttcaa cacaagcggt catattttcg gaaaatgttg
     3661 caatttgcaa aaagttggaa aatatgaccg cttgttttat atccggagtt attcctagtt
     3721 agcctgtctg attttgtcga aggcagattc aagatcgcta ctgaattgaa tttgcgggat
     3781 ttcgtttacc gttttttgtg agcggactag cattctcatc ggctgaaatt gcacattaca
     3841 gagatgaagt tgttgatgtg gcaacatatg ctgtacaaag cgggttaggg cgtgaatgcc
     3901 accagcatct aatactgtaa cggcatcgca ttgcagcaca atatgtttaa tttggtgatc
     3961 ggtatgtacg gttttattgt gcagatcggc aaagagatta tcggcggcag caaaaaataa
     4021 cggaccgctg atccgataaa ccaacacatc gttcaaatcg gttgggtgag ccatttcaaa
     4081 ggatttagtc atttctgcaa tagtacggat aaatagcagg cttgccagta acacccctac
     4141 cgtaatggca attaccatat caaataatac cgtgagggta atgcaagtca gtaaaaccgc
     4201 aatttcattt ttacctgaac ggcgggtaag ttgaatgatt tgtggaatat ctgccatatt
     4261 ccaagctact accaataata gtgcagccat tgaggaaaga ggcaaatagg aaagtgcttt
     4321 agccaaaaag agtagggcaa ataaaaccaa caaggcgtga accacactag aaatggggga
     4381 aactgccccg gaacgaacat tggcagccga tctcgcaatc gctgctgtgg cggtaattcc
     4441 ccctaaaaat ggcgaggcaa tattacctaa gccttgggct aatagttcgt tgttagagtg
     4501 gtgcttggta tctgtcatat tatcgcacac taccgcacat aataacgatt cgatagcccc
     4561 aagcattgcc attgaaaagg cagccggtaa taaggcttga atggtggtta agttccaatc
     4621 tatccgattc ccctctgcat tcgggagatt ccaaggtaac acaaattcag gtaatacgct
     4681 tgggatacca tacccagtgg tgccgtcaga gagcgtgtag tggaatgctg agccgatagt
     4741 ggcaacgttt tgtccgaaat gaatcagcag taatgataac agcgtgccga taaagacggc
     4801 gggtaaatgc ccgggaatag gcaaccgtag cttgtgccaa cgagttaaaa ccaacaatgt
     4861 tacgacaccc actaaggtgt cagcccaatt tatggttggc aatgctgaaa aaatagcctc
     4921 tagcttgcca agatagtgtt caggcatttt ttcaatgctt aagcccagaa aatctttgat
     4981 ttgcaaggtg gcgatcacaa taccgatgcc acaggtaaaa cccagtgtga caggtagagg
     5041 aatgtattca attaagcgtc ctaatcggag taacgccatc aatactaaaa ttcctccgga
     5101 aagcattgtt gccatgagta atccacttaa gccaaactgc tgcgtgacgg ggtatagaat
     5161 caccacaaaa gcggctgttg ggcctgaaat attaaatctt gaaccgcctg ttagggcaat
     5221 cacaatcccg gcaacaatcg ccgtatataa accgtgctgt ggtggcacac cgctggcaat
     5281 cgccaacgcc atagataacg gaatagcaat aacgccaacg gttaagcctg aaataatatc
     5341 tctgattaaa tgttgtttac cataacctgc attgagagca tcttttaatg cactaaaagg
     5401 cttgacggca agaaaagcat ttttagttaa aaaccattta tttaacatag aatgttcgag
     5461 tgaagagaat gtttcgctta ttttactgca atgaataaaa ttaaa
//
LOCUS       DANLXO010000132         5418 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.134, whole genome shotgun sequence.
ACCESSION   DANLXO010000132 DANLXO010000000
VERSION     DANLXO010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5418
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.134"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            69..203
                     /locus_tag="PXD69_002410"
     CDS             69..203
                     /locus_tag="PXD69_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/trimethylamine N-oxide reductase
                     NapE/TorE"
                     /protein_id="HDL6284554.1"
                     /translation="MRSELLKTLLLSGLILPLLMAFAVGAYGFIVWMLQLFVIGLPGA
                     "
     gene            207..1370
                     /gene="torC"
                     /locus_tag="PXD69_002411"
     CDS             207..1370
                     /gene="torC"
                     /locus_tag="PXD69_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HDL6284555.1"
                     /translation="MLGSIKALFTRPATKIGLGVLVGIGFIAGAISWHQFNKAMDHTS
                     TEEFCVSCHSMQQPLEELKKTAHWSNKSGVTATCSSCHLPHDYTEKYARKVQASREAW
                     AELSGKYKEEGSFEKHRLEMAEREWARFAANGSKECKACHSYERMNFDKMGEAARKAM
                     KPAAEKDQSCMDCHKGIAHHLPKADENALKSKFDQFVNKSPNQGKSYYTKGNAELFLD
                     EGLSQAIGQLETAVPVAFVQAGKNADLVELTMWRKEKGFGRIWYHDFGKNITDAVLTK
                     EFMANQPKFEVLETKEDPITGLNWQKVKLQAWIGKAQLLDDVTPIWANAENQYKTQCS
                     TCHRQPDVAHFDSNSWIGLFNGMVGFTNMDKQTGKEVLRYLQMHASDSEEAKH"
     gene            1470..3935
                     /gene="torA"
                     /locus_tag="PXD69_002412"
     CDS             1470..3935
                     /gene="torA"
                     /locus_tag="PXD69_002412"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL6284556.1"
                     /translation="MQQSRRQFLKNMSVMAAAVTMPNFLVPRNVFASEDLSQWKVSGS
                     HWGAMRAKIENGRVAEIKPFEFDKHPTEMLNGIKGLIYSDSRIRYPMVRLDWLKNRHN
                     SNTAQRGDNRFVRVTWDEALDLFYQELERVQKEYGPWALHTANVGWRSTGQFHSCGNH
                     MIRAIAMHGNSVGTAGDYSTGAGQTILPYVLGSTEVYSQGTSWEIILKESENIIFWAS
                     DPVKNLQVGWNCETHEAYAYLEKLKEKVAAKGVNVICVDPVKSKTQNFLGCEQQYINP
                     QTDVPFMLALAHTLYTENLYDKKFLDMYTVGFEKFLPYLLGETEDKVAKTPEWAAEIC
                     GISADKIREFARMLAGKRTQFIFGWAIQRQQHGEQPYWMGAVLASMLGQIGLEGGGIS
                     YAHHYSSIGIPESGAAMPGAFPLNIDEGQTPKYDNKDYKGYSDTIPVARMTDSLLHAG
                     ETIDYNGKKVTYAPFKMAIFTGCNQWHRHSERNKMKQAFQKLETIVSINYSWTATCRF
                     SDIVLPACTPFERNDIDAYGSYSNRGVIAMHKLVDPLYDSRSDFEIFRDLCRRFGKEK
                     EYSRGMDEMQWVEKLYKDCRRENRGKFEMPEFAEFWQKGYVLFPEGKPWVRHADFRED
                     PELHALGTPSGFIEIYSNKIASFGYDDCKGHPMWFEKAERSHGGKNSDKFPYWLQSVH
                     PDKRLHSQLCESKELRETYSVQGREPLYINPQDAAKHGIQDGDLVRVFNDRGQAIVGA
                     VLSDNFPTGVVRLQEGAWYSPLDESVGAIDTYGDPNTMTLDIGTSKLAQAVSANTCLV
                     NIEKFIGNAPAPNGFNGAIEVTA"
     gene            3935..4525
                     /gene="torD"
                     /locus_tag="PXD69_002413"
     CDS             3935..4525
                     /gene="torD"
                     /locus_tag="PXD69_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HDL6284557.1"
                     /translation="MTLAISREERQFIYGWFNAMLARELSDEQLNALQAGEFDDFFAY
                     LSELGFAEQVAKFQAEVTACRQLEFPRLELAADFAQLFLLEGNLSAIPYASAYLSGEA
                     LAKNLAEMDRLLGEFGLQVNRETKEPSDHLCVYLTLFDRLLAEKPLETQQQFLQNQLM
                     SWLPAWFAKAKTVKTNTGVYPALLRLFEQVLLKEQR"
     gene            4665..5354
                     /locus_tag="PXD69_002414"
     CDS             4665..5354
                     /locus_tag="PXD69_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDL6284558.1"
                     /translation="MQNNKTTYLNWYDLCVLTLILFGEAIYTSTQQYFITTEMQGNFE
                     ENLTFSNEQNYWALLTQLALLLIAMGYLKWRNFDFSRWVIRPSWLAFFSGIGLFILLS
                     LAMDLYFETLYGVYNLVYPEPFWAVLREVNISTVLYAILNGFYEEIFFLGICLAVKPE
                     YLKWAVIYSLIIRVSFHTYQGMESALGLGIWLGLIIYLLYSRSKQKNLFPFWVAHSIA
                     DILGLSLLAYF"
BASE COUNT         1556 a         1185 c         1312 g         1365 t
ORIGIN      
        1 atatcaaggc aaattgtttc tgaagataaa ataattaaca cttattagtt aataaaaaag
       61 gagttgaaat gcgttcagaa ctattaaaaa cgcttttgct atcagggctg attttaccgc
      121 tattgatggc gtttgccgta ggagcttacg gctttattgt gtggatgtta caactgtttg
      181 ttattggttt accgggagcg tagaaaatgt taggttcaat caaagcatta tttactcggc
      241 ctgcaaccaa aatcgggttg ggagtgttag ttggtatcgg ttttattgcc ggagcaatta
      301 gctggcatca atttaataaa gcgatggatc ataccagcac tgaagagttt tgcgtgagtt
      361 gccactcaat gcagcagccg ttagaggagc ttaaaaaaac cgcccactgg tcgaataaaa
      421 gcggggtaac ggcaacctgt tcaagctgcc acttaccgca cgattatacc gaaaaatatg
      481 cccgcaaagt gcaggcaagc cgtgaggcgt gggcagaatt atccggcaaa tataaagaag
      541 aaggctcatt tgaaaaacac cgcttagaaa tggcagagcg tgagtgggca agatttgccg
      601 ccaatggttc aaaagagtgt aaggcttgcc acagctatga gcgaatgaat tttgataaaa
      661 tgggcgaagc agctcgtaag gcaatgaaac cggctgcgga gaaagatcaa agttgtatgg
      721 attgccacaa aggcattgct caccacttac cgaaagccga tgaaaatgca ctgaaatcga
      781 agtttgatca gtttgtgaat aaatccccaa accaaggcaa atcttactac accaaaggga
      841 atgccgaatt atttctagac gaaggtttaa gccaagctat cgggcaatta gaaaccgccg
      901 tgccggtggc atttgtgcaa gcgggcaaaa atgcggattt ggttgagctg acaatgtggc
      961 gtaaagagaa aggtttcggt cgcatttggt atcacgattt cgggaaaaac attaccgatg
     1021 cggttctaac caaagagttt atggcaaatc agccgaaatt tgaggtgttg gaaaccaaag
     1081 aagatccgat taccggcttg aattggcaaa aagtgaaact acaagcgtgg attggcaaag
     1141 ctcaattatt agacgatgtt accccaatct gggcgaatgc agaaaaccaa tacaaaaccc
     1201 aatgtagcac ttgccacaga cagcctgatg tcgcccactt cgattccaac agctggatcg
     1261 gcttattcaa cggaatggtc ggctttacca atatggataa acagaccggc aaagaggtgc
     1321 tacgttattt acaaatgcac gcctccgata gtgaagaagc gaagcattaa taatattact
     1381 cccctcttta ctaaagaggg gaattaatcg agcgttgaat aacattctct gtactagctc
     1441 acgtttttac aaataaagaa ggacaagata tgcaacaatc tcgccgtcaa tttttaaaaa
     1501 atatgtctgt gatggctgcc gctgtcacaa tgccgaattt cctcgtgcct cgcaatgtgt
     1561 ttgcgagtga agacctcagt caatggaaag tttccggctc tcactggggg gcaatgcgtg
     1621 ccaaaattga gaacggacga gtggcagaaa tcaaaccgtt cgagtttgat aaacacccga
     1681 ccgaaatgct caacggcatt aaaggcttaa tttacagcga ttcccgtatc cgctacccga
     1741 tggtgcgttt agattggctc aaaaaccgcc ataacagcaa caccgcacag cgtggcgata
     1801 accgctttgt gcgggtaacg tgggacgaag ccctcgacct gttctaccaa gagttagaac
     1861 gggtacaaaa agagtacggc ccgtgggcgt tacacaccgc caatgtgggc tggcgttcaa
     1921 ccggtcaatt ccacagttgc ggtaaccata tgatccgagc gattgcgatg cacggtaaca
     1981 gtgtcggcac ggcaggcgac tattctaccg gtgcagggca gaccattctg ccgtatgtgc
     2041 tgggttcaac cgaagtctat tcgcagggca cgtcttggga aatcatctta aaagagagcg
     2101 aaaacatcat tttctgggca agcgacccgg tgaagaacct gcaagtgggt tggaactgcg
     2161 aaacccacga agcctatgcc tacttggaaa aactgaaaga gaaagtggca gcaaaaggcg
     2221 tgaatgtgat ctgtgttgat ccggtgaaaa gcaaaaccca gaatttctta ggttgcgaac
     2281 agcagtacat caatccacaa accgatgtgc cgtttatgtt ggcacttgcc cacacgctct
     2341 acaccgagaa cctgtacgac aaaaaattct tggatatgta cacggtcggc tttgaaaaat
     2401 tcctgccgta tctgttaggc gaaaccgaag acaaagtggc gaaaaccccg gaatgggcgg
     2461 ctgaaatttg tggtatttcc gccgacaaaa tccgtgaatt tgcccgaatg cttgccggca
     2521 aacgcaccca atttattttc ggctgggcaa ttcaacgcca acaacacggc gaacaaccgt
     2581 actggatggg agcggtgcta gcctcaatgt tagggcaaat cggcttggaa ggcggcggca
     2641 tcagctatgc tcaccattac agctctatcg gtattcctga atccggtgcg gcaatgccgg
     2701 gggcgttccc gctcaatatt gatgaggggc aaaccccgaa atacgacaac aaagattaca
     2761 aaggctacag cgacaccatt ccggtggctc gtatgaccga cagcttgctc cacgccggcg
     2821 aaaccattga ttacaacggc aaaaaagtga cttacgctcc gttcaaaatg gcgattttca
     2881 ccggctgtaa ccaatggcac cgccattccg agcggaacaa aatgaaacag gcgttccaaa
     2941 aactggaaac cattgtttcg atcaactaca gttggacggc aacctgccgc ttctccgaca
     3001 tcgtgctgcc ggcctgtacc ccatttgaac gcaacgatat tgacgcctac ggctcataca
     3061 gcaaccgtgg cgtgattgca atgcacaagc tggttgatcc actctacgac tctcgctccg
     3121 actttgagat tttccgagat ctctgccgcc gtttcggtaa agagaaagag tacagccgtg
     3181 gaatggacga aatgcagtgg gtagaaaaac tctacaaaga ttgtcgccgt gaaaacagag
     3241 gtaaatttga aatgccggag tttgctgaat tttggcaaaa aggctatgtg ctgttcccag
     3301 agggcaaacc ttgggttcgc cacgccgatt tccgtgaaga tccggaattg cacgcacttg
     3361 gcacaccgtc cggctttatc gaaatttaca gcaacaaaat cgcctctttc ggctatgacg
     3421 attgcaaagg tcacccaatg tggtttgaga aagccgaacg ttcacacggc ggtaaaaatt
     3481 ccgacaaatt cccgtactgg ttgcaatcag ttcacccgga caaacgctta cactctcaac
     3541 tttgtgaatc gaaagaactg cgtgaaactt acagcgtgca agggcgtgaa ccgctttaca
     3601 ttaacccaca agatgccgcc aaacacggca ttcaagacgg agatttagtg cgagtgttta
     3661 acgaccgtgg gcaagcgatt gtgggggcgg tgctttccga caacttcccg accggcgtag
     3721 tgcgtttaca agaaggggct tggtattcac cccttgacga aagcgtgggg gcgattgaca
     3781 cctatggcga cccgaacaca atgaccctcg acatcggcac gtccaagttg gcacaagcgg
     3841 tttccgccaa cacttgcttg gtgaacatcg agaaatttat cggcaatgcc ccggctccga
     3901 atggctttaa cggtgcgatt gaggtaacgg cttaatgacg ttggcaatca gtcgtgaaga
     3961 acggcaattt atctatggct ggtttaacgc aatgctcgcc cgagaacttt cggacgagca
     4021 gttaaatgcc ttacaagcgg gcgaatttga cgattttttt gcatacctca gcgaattggg
     4081 ttttgccgaa caggttgcaa aatttcaagc agaagtgacc gcttgtaggc agctggaatt
     4141 tcctcgtcta gaactggcgg ctgactttgc ccaactgttt ttattggaag gcaatctcag
     4201 tgccattcct tacgcctccg cctatttaag cggcgaagcg ttagcgaaaa atttggcgga
     4261 aatggacaga ctgctgggcg aatttgggct gcaagttaat cgagaaacca aagagccgag
     4321 cgatcacctt tgcgtttatc tcaccctttt tgaccgcttg cttgctgaaa aaccgttgga
     4381 aacgcaacag caatttctgc aaaaccaact gatgagctgg ctccctgcgt ggttcgccaa
     4441 agccaaaacc gtcaaaacta acaccggcgt ttatccggcg ttgctaaggt tgtttgaaca
     4501 ggtgttgctg aaggaacaaa gataaagtta tttatttgag aatgatttgt attgagcgaa
     4561 ttgagaaagg aagttaaaat ttcaacttcc ttttttattg gctggattta tccacattat
     4621 tacaagcggt tatttttata aaaaaattta caaaggagac attaatgcaa aataataaaa
     4681 ccacctacct aaattggtac gatttatgcg tgctaaccct gatcctgttt ggtgaggcaa
     4741 tttatacctc aacccagcaa tatttcatca ccaccgaaat gcaaggtaat tttgaagaaa
     4801 atttaacctt ttcaaatgaa caaaattatt gggcattact gacgcaactt gcattgttgc
     4861 tgattgcaat gggctatcta aaatggcgga attttgattt cagccgttgg gtgattcgtc
     4921 cctcttggct ggcttttttt agcggtatcg ggttgtttat cttgctctcg ttagcgatgg
     4981 atctctattt tgaaacatta tatggtgttt acaacctagt gtatccggag ccattttggg
     5041 cagtattgag agaagtgaat atttctaccg tgctgtatgc gattttaaac ggcttttatg
     5101 aagaaatctt tttcctcggt atttgcttgg cggttaaacc tgaatattta aaatgggcgg
     5161 tgatttattc actgattatt cgggtgagtt ttcataccta tcaaggaatg gaaagtgcgt
     5221 taggattagg aatttggctc ggtttaatta tttatttgct ctactcacgc tcaaagcaga
     5281 aaaacctatt tccattttgg gtggcacaca gtattgcgga tattttgggg ctgagtttgt
     5341 tggcttattt ttagttaaag gtgctacatt taagcggcat aagttgatag agctgatcgt
     5401 accagtagca taaaaaca
//
LOCUS       DANLXO010000133         5048 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.135, whole genome shotgun sequence.
ACCESSION   DANLXO010000133 DANLXO010000000
VERSION     DANLXO010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5048
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.135"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            19..492
                     /locus_tag="PXD69_002415"
     CDS             19..492
                     /locus_tag="PXD69_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HDL6284559.1"
                     /translation="MLEKITACPCQTGKRYAEYCQPFHLKQTFASTAEQLMRSRYSAY
                     TLVNIPYIVETTVPSQQKLLDQTAMKEWAENTKWVGLSVLNHLPSLSRIHSQVEFKAF
                     FDTDEGIQGHHETSLFVQIDERWFFVDPTVPLPHQKQPCVCGSGKKFKHCCGNYL"
     gene            564..1193
                     /locus_tag="PXD69_002416"
     CDS             564..1193
                     /locus_tag="PXD69_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HDL6284560.1"
                     /translation="MDFSKILSQVLDTAKDAATNGLIKGNSKNDQIAKIGGGAVAIGL
                     ISMLFGRNGGSSLAKLGSLAAIGSLAYQAYQKYQAQNSSVSELSQNNFENVDENVASK
                     VILQAMIAAAASDGAITEEEKAAIVSQVGDEAEVIEWIRQEMDTPATVEEIARQVGND
                     QALATQVYLASRAVCRDLERKEIVFLANLADALGLAEALVEQLEKDAGF"
     gene            complement(1271..1918)
                     /locus_tag="PXD69_002417"
     CDS             complement(1271..1918)
                     /locus_tag="PXD69_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL6284561.1"
                     /translation="MISIRNVSKQYRTNNGWKTILKDINFELKKGEKVGILGRNGAGK
                     STLIRLMSGVEPPTTGTIERQMSISWPLAFSGAFQGSLTGMDNLRFVSRIYDADFDYV
                     KSFTEEFSELGEYLYEPVKSYSSGMKARLAFALSLSIEFDCYLIDEVIAVGDARFAAK
                     CKHELFEKRKDRSLILVSHSPASIKEYCDSAMVLEEGIMHTFDSIDNAYNFYNKT"
     gene            complement(1915..2712)
                     /locus_tag="PXD69_002418"
     CDS             complement(1915..2712)
                     /locus_tag="PXD69_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL6284562.1"
                     /translation="MRYGDNTTFKRSCVIQKRVIHALLMRELITRYGRKNIGFLWLFI
                     EPLLLTLVITVAWKYIKADKFSTLNIIAFMITGYPIAMMWRNASNRAQGAISANLSLL
                     YHRNVRVLDTIFTRVLLEVTGASIAQILLMTIFIAIGWIEMPNDIFYMLCAWILMAFF
                     ALGLGLIICTLAHYIEPFGKIWGTFSFFLLPLSGAFFFVHNLPLTAQNIALWFPMIHG
                     TEMFRHGYFGETVITYESISYLIVSDIILLFIGLLCVRSFSKGIEPR"
     gene            complement(2712..3815)
                     /locus_tag="PXD69_002419"
     CDS             complement(2712..3815)
                     /locus_tag="PXD69_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL6284563.1"
                     /translation="MSKKKKHFLANPLLWLTVIIPTACSGIYYSLFASDIYVSESSFV
                     VRSPNNQSSLTGVGALLQNSGFARSQDDTYSVQEYMRSRTALEQLEAEIPVKRFYSEQ
                     GDLLSKFNGLGFNDTQEAFYRYFKERLNIDVDSISGIATLRVRAFNAEEGQKINENLL
                     QQGETLINRLNERARQDTVEFAEERVKEAEKDVNNTALALSQYRTKNKIYDLPAQSSV
                     QLSLISTLKSELIRVETQLAQLKSITPDNPQVAALQMRQKSLKKEIDDQSKQLAGGNT
                     SVATQTAEYQRLVLANELAQQQLAAAMTSLQNTRGEADRQQLYLEVIGRPSKPDWALE
                     PYRIYNIISTFFIGLILFGVLSLLLASIREHKN"
     gene            complement(3887..5035)
                     /locus_tag="PXD69_002420"
     CDS             complement(3887..5035)
                     /locus_tag="PXD69_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HDL6284564.1"
                     /translation="MTLSLISACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDN
                     ITVQNLYQEQQSQRFSGFDGSMGVGGYAGTVNVGDILEISIWEAPPAVLFGGTFSAEG
                     QGNGHLTQLPQQMVNKNGTVTVPFIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVR
                     IANNLSSDVTVIRQGNSIRMPLSANNERILDAVAAVGGTSENIEDVTVRLTRGNKVRS
                     MAFETLIADPSQNITLRSGDVIALMNTPYSFTGLGAVGNNQQMRFSSKGITLAEAIGK
                     MGGLIDERSDPRGVFVFRHIPFTQLDYDNQAQWREKGYAEGMDVPTVYQVNLLKPQSM
                     FLLQRFPIQDKDIVYVSNAPLSEFQKFLRMIFSITTPITGTANTIRAY"
BASE COUNT         1602 a          954 c          905 g         1587 t
ORIGIN      
        1 ttatgcggaa atgtaaaaat gttagaaaaa atcaccgctt gtccttgcca aacaggcaaa
       61 cgctacgctg aatattgcca acctttccat ttaaaacaga catttgcatc aacggcagag
      121 caattaatgc gctcccgtta cagtgcttat actttggtta atattcccta tattgtggaa
      181 acgacagtgc caagtcagca gaaattactt gatcagactg caatgaaaga gtgggctgaa
      241 aatacaaaat gggtaggatt atccgtgcta aatcacttac cttctctttc gagaatacat
      301 agtcaggttg aatttaaagc cttttttgat acagatgagg ggatacaggg acaccacgaa
      361 acctctcttt ttgttcaaat tgatgagcga tggttttttg tggatcctac cgtacctttg
      421 cctcatcaaa aacaaccttg tgtatgtggc tccggaaaga agtttaagca ctgttgtgga
      481 aattatcttt aatttgaatt gaactcttgt ttgaatctaa ggactaatga gtaaatttca
      541 tttacttacc aagaggaaca aaaatggatt tcagtaagat tttaagtcaa gtattagata
      601 cagcaaaaga tgccgctaca aacggattaa ttaaaggtaa ttctaaaaac gatcaaatcg
      661 ctaaaattgg tggcggcgct gtcgctattg gtttaatttc aatgttattt gggcgtaatg
      721 gcggttcaag tttagcaaaa ttaggctctt tagccgctat cggtagcctt gcttatcaag
      781 cataccaaaa gtatcaagcg caaaattcat cggtttcaga acttagccaa aataattttg
      841 aaaatgtaga tgaaaatgtg gcaagtaaag tgattttaca agcaatgatt gccgctgctg
      901 cttcagatgg tgctattact gaagaggaaa aagcagctat tgtttcccaa gttggagatg
      961 aggctgaagt cattgagtgg attcgtcaag aaatggacac tccggctaca gttgaagaga
     1021 ttgcccgcca agtaggtaat gaccaagcat tggctacaca agtttactta gcttcccgtg
     1081 cagtatgcag agatttagaa cgcaaagaaa tcgttttctt agctaattta gctgatgctt
     1141 taggtttagc tgaggcatta gttgaacaat tagaaaaaga cgcaggtttc taattttcag
     1201 ttttagtaac aagcggttat attttgagag ttttttgcga aaaacttgtg aaatataacc
     1261 gcttgttctt ttatgtttta ttgtagaaat tataagcgtt atctatagaa tcaaaagtat
     1321 gcatgatacc ctcttctaaa accattgcag aatcgcaata ttctttaatt gaggctgggc
     1381 tatgagaaac taaaatcaat gaacggtctt tccgtttttc aaaaagctcg tgcttacatt
     1441 tggcagcgaa tcgagcatcg cctactgcaa tcacttcatc aattaagtaa caatcaaatt
     1501 caatagaaag cgataatgca aaggctaaac gggccttcat accagaagaa tagcttttta
     1561 ccggttcata taaatattca ccgagttctg aaaattcttc ggtgaaagat tttacatagt
     1621 caaaatcagc atcataaatt cggctgacga aacgaagatt atccattccg gtcaaactac
     1681 cctggaatgc accactaaat gccagtggcc aagaaatcga catttgacgt tcaatcgtac
     1741 ctgttgttgg aggttctact ccgctcatta aacggattaa ggttgatttt cctgcaccat
     1801 tgcgccctaa aatccccact ttttcgcctt ttttcagctc aaaatttata tcttttaata
     1861 tggttttcca accgttatta gttcgatatt gcttacttac atttctaata ctaatcatct
     1921 tggttctatc cctttactaa aacttctcac acaaagcagt cctataaata gaagaataat
     1981 atcacttact ataagataac taatgctctc ataggtaatt accgtttcac caaaataacc
     2041 atgtctaaac atttctgtac catgaatcat tggaaaccat aaggcaatat tttgagcagt
     2101 tagcggtaaa ttatggacaa agaagaatgc accagaaaga ggaagtagaa agaagctgaa
     2161 tgttccccaa atcttaccaa aaggttcaat ataatgtgct aaagtacaga taattaaacc
     2221 taaacctaag gcaaaaaatg ccattaatat ccaagcacag agcatataga aaatatcgtt
     2281 aggcatttct atccaaccaa tagcgataaa tatagtcatt aagagaattt gggcgataga
     2341 tgcgccagta acttctaata aaactcgagt aaatatcgta tctagcactc tcacatttct
     2401 gtggtaaagc aaacttaagt ttgctgatat tgctccttga gctctattag aggcatttct
     2461 ccacatcatt gcgatagggt agcctgtaat cataaaagcg ataatattta aagttgaaaa
     2521 cttatctgct tttatatatt tccaagcaac agtaatcact aacgttaaca ataatggttc
     2581 gataaaaagc cataagaagc caatattttt acgcccataa cgagtaatta attccctcat
     2641 taaaagggcg tgaatcaccc gtttttgaat cacacaggaa cgtttaaagg ttgtattatc
     2701 accatatcgc attagttttt atgctctcta atacttgcta gtaacaaact taatactcca
     2761 aatagaatta agccgataaa aaaagttgat ataatattat aaattctgta gggttctaat
     2821 gcccaatctg gtttgcttgg cctaccaatt acctctaaat aaagttgttg gcgatcagct
     2881 tcacctcgtg tattttgtaa tgaagtcatt gctgctgcaa gttgttgctg agctaattcg
     2941 ttagcaagaa ccaaacgttg atattcagca gtttgcgttg ctacagaagt attacctcct
     3001 gcaagttgtt tggactgatc atcaatttct tttttcaaac ttttttgacg catttgtaat
     3061 gcggctacct gaggattatc cggcgtaatt gacttcaatt gtgctaattg tgtttctacc
     3121 cgaattaatt cactttttaa ggtagaaatt aatgagagct gaacgctgga ttgtgccggt
     3181 aaatcataaa ttttattttt agttcgatat tggcttaatg ctaacgcagt attattgacg
     3241 tctttttcgg cctcttttac acgctcttct gcaaactcaa ccgtatcttg tcttgctctt
     3301 tcattaaggc ggttaattaa tgtttcccct tgctgtaata aattctcgtt aattttttgt
     3361 ccttcttctg cattaaaagc acgaacgcgt agcgttgcaa tacctgaaat agaatcgaca
     3421 tcaatattca gacgttcttt aaaataacga taaaatgctt cttgggtatc gttaaatcct
     3481 aaaccgttaa atttgcttag taaatcacct tgctcactat aaaaacgctt taccggaatt
     3541 tctgcttcaa gttgttctaa tgcggtacgg gaacgcatat attcctgaac tgaataggta
     3601 tcatcttgag aacgggcgaa accggagttt tgcaataaag caccaacgcc tgttaagctc
     3661 gattgattat tgggcgaacg aaccacaaag ctagattctg aaacataaat atcagaggca
     3721 aataaggaat aataaattcc agaacaagca gttggaataa ttacagttag ccacaacaaa
     3781 gggttggcta aaaaatgttt tttcttcttt gacataaaat cctcaacgaa aagtgttaca
     3841 agcggtcatt ttttaatgat tttttaccat tttatctatg agctaattag tacgctctaa
     3901 ttgtattagc tgtacctgta attggtgtag taatggagaa aatcattctc aagaattttt
     3961 gaaattcaga cagtggagca ttcgacacat atacaatatc tttatcttga atagggaaac
     4021 gctgcaataa aaacattgat tgcggtttta ataaattcac ctgataaaca gttggaacgt
     4081 ccattccctc tgcataacct ttttcacgcc attgagcttg gttatcgtaa tctaattgtg
     4141 taaaaggaat atggcggaat acgaacacac cacgagggtc tgaacgctca tcaattaatc
     4201 ctcccatttt accgatagct tcagcaaggg taatgccttt acttgaaaaa cgcatttgtt
     4261 gattattacc tactgctcct aatccggtaa agctataagg agtattcatt aaagcaataa
     4321 catcacctga acgtaatgta atattttgtg aggggtcagc aattaatgtt tcaaacgcca
     4381 ttgaacgcac tttatttcca cgtgttaaac gaactgttac atcttcaata ttttcgcttg
     4441 taccacctac tgccgcaact gcatctaaaa tacgctcatt attggcactt aatggcatac
     4501 gaatgctatt tccttggcgg ataaccgtaa catcagacga caagttattc gcaatacgaa
     4561 ctaatgcttg aggttgatta gctttacggc tcaatgctcc gacaatttga ttctgaatta
     4621 cttcaggtgt ttttccagca actttaatat taccgataaa aggcacagtt accgttccat
     4681 ttttgttcac catttgctga ggtaattggg ttaaatgccc attaccttgc ccttcagcac
     4741 taaatgttcc accaaatagc acggcaggtg gcgcttccca aatggatatt tctaatatat
     4801 cgcctacatt aactgttcca gcataaccac ccacacccat tgagccatca aatcctgaaa
     4861 aacgttgaga ttgttgctct tggtataagt tttgtacggt gatgttatct aacttgatta
     4921 aattgacttc aggcaactgc gtttcagctg tattttcatt acttgctaag atttcgctat
     4981 agcttgggcc ggacgttggt aggctagagc aggctgaaat taatgataat gttataaata
     5041 ataatgta
//
LOCUS       DANLXO010000134         4987 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.136, whole genome shotgun sequence.
ACCESSION   DANLXO010000134 DANLXO010000000
VERSION     DANLXO010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4987
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.136"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..581
                     /locus_tag="PXD69_002421"
     CDS             <1..581
                     /locus_tag="PXD69_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDL6284565.1"
                     /translation="TTIMQRISGAKQIDSLTVKIKDDIESQTAEKSIAELLVAKHGKK
                     DFFIMNSDTIKQTITSTTNTMTLLISSIALISLIVGGIGVMNIMLVSVTERTREIGVR
                     MAIGAKQRNILQQFLIEAVVICLIGGVIGILLASAIIWAFNTLGTNFKMMLSPESVII
                     AVLCSTLIGVVFGYIPARNAAQLNPITALAQE"
     gene            665..1435
                     /locus_tag="PXD69_002422"
     CDS             665..1435
                     /locus_tag="PXD69_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDL6284566.1"
                     /translation="MTITNTELEQILNTKLNSSAINDYAPNGLQVEGKREIKKIITGV
                     TATLPLIEKAIEKNADAILVHHGYFWKSENPCIRGMKGKRIKQLLVNDINLFGYHLPL
                     DIHSELGNNAQLAKHLGVKNLQGLEDRPNSIPMYGELENPISANELKQKLEKTLQRTV
                     ILCDEFVHSPQKMIKTIGICSGGGQGYIDLAFEKGCDAFISGEISEQTTHSAREQGIY
                     YFACGHHATERDGVKALGEWLAVEYGLDVEFIDIDNPA"
     gene            complement(1516..2646)
                     /gene="nrdB"
                     /locus_tag="PXD69_002423"
     CDS             complement(1516..2646)
                     /gene="nrdB"
                     /locus_tag="PXD69_002423"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL6284567.1"
                     /translation="MAYTTFSQHKNDQLKEPMFFGQNVNVARYDQQKYEIFEKLIEKQ
                     LSFFWRPEEVDVSQDRIDYAQLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDD
                     LIRDSQLYSLYGEGSYQVDGKTCEVSLRSLKRQLYLCMMSVNALEAIRFYVSFACSFA
                     FAERQLMEGNAKIIKFIARDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYEL
                     FLSAAEQEKAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIP
                     WINAWLVSDNVQVAPQEVEVSSYLVGQIDAKVDSRDFGDFEL"
     gene            complement(2673..4943)
                     /gene="nrdA"
                     /locus_tag="PXD69_002424"
     CDS             complement(2673..4943)
                     /gene="nrdA"
                     /locus_tag="PXD69_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL6284568.1"
                     /translation="MNKSLMVTKRNGTREQLNLDKIHRVITWAAEGLENVSVSQVELR
                     SHIQFYEGIRTSDIHETIIKAAADLITKDTPDYQYLAARLAIFHLRKKAYGQFEPPHL
                     YEHVKKLVALGKYDADLLSDYTPEEWETMNGFIDHWRDMTFSYAAVKQLEGKYLVQNR
                     VSGEIYESAQFLYLLVAACLFSKYPTASRLDYIRRFYDATSTFKISLPTPIMAGVRTP
                     TRQFSSCVLIECDDSLDSINATSAAIVKYVSQRAGIGINAGAIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATVYFPIWHLEAESLMVLKNNRGVEENRARHMD
                     YGVQINKMMYQRLIKGGEISLFSPSDVPGLYEAFFADQAKFEQLYLQYEQDPSIRQRK
                     VKAVELFSLLMQERASTGRIYIQNVDHCNTHSPFNPRVAPIRQSNLCLEIALPTKPLA
                     HFYDEQGEIALCTLSAFNLGTLSNLDELEELADLVVRALDALLDYQDYPVLAARNSSL
                     NRRALGVGVINYAYYLAKNQVRYSDGSANNLTHRTFEAIQYYLLKASMNLAKEQGACA
                     YFDQTTYAKGLLPIDTYKKEIDELTQEPLHYDWEQLRQDILQFGLRNSTLTALMPSET
                     SSQISNATNGIEPPRGYISVKASKDGILKQVVPEYERLKAYYELLWDIPNMDGYLHLV
                     GIMQKFVDQAISANTNYDPNRFAEAKVPMKVLLKDLLTAYKYGLKTLYYQNTRDGAED
                     VQDDLDEGCAGGACKI"
BASE COUNT         1547 a         1049 c          917 g         1474 t
ORIGIN      
        1 ataccactat tatgcaacgc atttcaggtg caaaacagat agattcactc acggttaaaa
       61 ttaaagatga tattgaaagc caaactgccg aaaaaagcat tgccgaattg ttagtagcta
      121 aacacggcaa aaaagatttc tttattatga atagtgatac gatcaaacaa accattacca
      181 gtaccaccaa tacaatgact ttgctgatct cctctatcgc ccttatttcg ctgattgtcg
      241 gtggtatcgg ggtaatgaat attatgctcg tttccgtcac cgaacgcacc cgagaaattg
      301 gtgtccgaat ggcgattggc gcaaaacaac gcaatatttt gcaacaattt ttaattgagg
      361 cggtggttat ttgcctaata ggtggtgtga ttggcatttt actggcaagc gctattattt
      421 gggcatttaa taccttaggt acgaatttta aaatgatgct ttcaccggaa tcggtgatta
      481 ttgccgtgct ctgctctaca cttatcggtg tggtatttgg ctacattccg gcaagaaacg
      541 ccgcccaatt aaacccaatt actgctctgg cacaagagta aatgcgataa ctatctgcta
      601 cactgtaggg gcaaaaaatt ttttgcccct acatccatta ttatgccaag tttaaggaga
      661 taaaatgaca ataaccaata ctgaactaga acaaattctg aacaccaaac tcaacagctc
      721 cgccattaac gactatgccc caaatggctt gcaagttgaa gggaaaagag agatcaaaaa
      781 aattattacc ggtgtgacag ctacacttcc cctgattgaa aaagcgattg agaaaaacgc
      841 cgatgcaatt ttagtccacc acggttattt ttggaaaagt gaaaacccgt gcattcgagg
      901 aatgaaaggt aaacgcatta aacagctttt agtgaatgac atcaatctct ttggttatca
      961 cctaccactg gatattcact ccgaactagg taacaacgcc cagcttgcta agcatttagg
     1021 agtaaaaaat ctacaaggtt tagaagacag acctaattca attccaatgt acggtgaatt
     1081 agaaaatccg atttccgcca atgaactgaa acaaaaactt gaaaaaacgt tacaacgcac
     1141 cgttatttta tgtgatgaat ttgttcatag cccacaaaaa atgattaaaa caatagggat
     1201 ttgctccggc ggaggacaag gctatattga tttagccttt gaaaaaggct gtgatgcctt
     1261 tattagtggc gaaatttccg aacagaccac tcactctgcc cgtgaacaag gaatctatta
     1321 ttttgcttgc ggtcatcacg ccacggaacg agatggcgta aaagccttag gtgaatggtt
     1381 agccgttgaa tatggtttag atgttgaatt tattgatatt gataaccctg cataaaaaat
     1441 acaagcggtt gaatttcctg aaaattttgc aatttgcaaa aaatcactaa aaatcaaccg
     1501 cttgtatatc atagtctaaa gttcaaaatc gccaaaatca cggctatcta ctttagcatc
     1561 aatctggcca accaaataag aactgacttc cacttcttgt ggtgctacct gtacattatc
     1621 ggaaaccaac cacgcattga tccacggaat ggggttggaa cgtgccttaa atggtaatgg
     1681 tagtccaaca gcctgcatcc gaatattagt gatatattca atatattgca ccaaaatatc
     1741 ccgatttagc cctatcatcg aaccgtcttt aaacaggtat tccgcccacg ctttttcttg
     1801 ttcagctgca cttaaaaaaa gctcgtaggc ctcttggcga cattcacgtg caatttctgc
     1861 catttcagga tcatcattgc cataggccat aatattcaat atatgctgag tgccggtaag
     1921 atgtaatgct tcatcacgtg caataaattt gatgattttg gcatttcctt ccataagctg
     1981 ccgttccgca aaggcaaatg agcaagcaaa agagacataa aaacgaattg cttcaagcgc
     2041 attcacactc atcatacaga gataaagttg tctttttaga ctacgcaaac tgacctcaca
     2101 ggtttttcca tcaacctgat aactgccttc accatacaaa ctatagagtt ggctgtcacg
     2161 aatcaaatca tcataatagg cggaaatatc tttggcacgc ttaataattt cttcgtttgt
     2221 gacaatatca tcaaatacta ttgatggatc attgacaata ttacggatga tatgtgtgta
     2281 agaacgactg tgaattgttt cgctaaatgt ccaagtttca atccaggttt caagctcggg
     2341 gatagacact aatggcaaaa gcgccacatt cgggctacgc ccttgaatgg aatccaacaa
     2401 ggtttggtat tttaaattgc tgataaaaat gtgcttttca tgttcaggca gttgggcata
     2461 gtcaatgcgg tcttgtgaca catccacttc ttccggtcgc cagaaaaatg agagttgttt
     2521 ttcaatcagt ttttcaaaaa tttcgtattt ttgttgatca taacgcgcca cattcacatt
     2581 ttgtccaaaa aacatgggtt cttttagttg atcattttta tgttgtgaaa acgtagtata
     2641 tgccatgtta ttctccttta tttctgttct tattaaattt tacaagcacc accagcacag
     2701 ccttcatcta agtcgtcttg cacatcttct gctccatcac gggtattttg atagtaaagg
     2761 gtttttaacc cgtatttata cgccgttaat agatctttta ataatacttt catcggtact
     2821 ttagcttctg caaagcggtt tgggtcgtaa tttgtattcg ccgaaatcgc ttggtcaaca
     2881 aatttctgca taatcccaac caaatgcaaa tatccgtcca tattaggaat atcccaaagc
     2941 agttcatagt atgcttttaa acgttcatac tccggcacaa cctgctttaa aataccgtct
     3001 tttgatgctt taacactaat atagccacgc ggaggttcaa ttccattggt ggcattcgaa
     3061 atttgcgacg aagtctccga tggcattaag gcagttaaag tggaattgcg caagccaaat
     3121 tgcagaatat cctgacgtag ttgttcccaa tcataatgaa gcggttcttg agttaattca
     3181 tcaatttctt ttttataagt atcgataggg agtaaccctt tggcataagt ggtttgatca
     3241 aaataagcac acgccccttg ttctttggct aaattcatcg atgcttttaa taaataatac
     3301 tgaatcgctt caaaggtacg gtgagttaaa ttattagcac tgccatcgga ataacgcact
     3361 tggtttttag ctaaatagta agcatagtta atcacgccta cacctaatgc gcgacgattt
     3421 aatgagctgt tacgtgcagc taataccgga taatcttgat aatctaatag ggcatctagc
     3481 gcacgaacca ctaaatcagc caattcttct aactcatcta aattgctgag tgtgcctaaa
     3541 ttaaatgccg ataatgtaca taatgcgatt tccccttgtt catcataaaa atgtgccagt
     3601 ggcttagttg gcaaagcaat ttctaagcag aggttcgatt ggcgtatcgg tgcgacacga
     3661 ggattaaatg ggctatgagt attacaatga tcgacattct gaatataaat tcgccctgtt
     3721 gaagcccgct cttgcatcag taatgaaaac aattctacag ctttaacttt acgttgccga
     3781 atgctcggat cttgctcata ttgcaaataa agttgctcaa atttagcttg atcagcaaaa
     3841 aacgcttcat ataaccccgg cacatctgat ggactaaata aactaatctc accgccttta
     3901 attaaacgtt gatacatcat tttattaatc tgtaccccgt aatccatatg gcgagcacgg
     3961 ttttcttcca caccacggtt attttttaat accattaagc tttctgcttc caaatgccaa
     4021 atcggaaaat acacggtagc cgctccaccg cgaacaccac cttgagagca agactttact
     4081 gcagtttgaa aatgtttata aaagggaata cagccggtat gaaatgcttc tccaccacga
     4141 atggggctac ctaatgcccg aattgcgccg gcattaatac cgatcccagc acgctgtgaa
     4201 acatatttaa cgattgcagc cgaggttgca ttgatggaat ctaagctatc atcacactca
     4261 attaacacac aggaactaaa ttgacgagta ggtgtacgca ctcctgccat aatcggtgtt
     4321 ggcaaagaaa ttttgaaagt ggaagtcgca tcataaaaac ggcgaatata atctaagcgg
     4381 cttgctgttg gatacttaga aaataaacag gcagctacga gtaaatacaa aaattgagcc
     4441 gattcataaa tctctccgct aacacgattc tgcactaaat attttccttc caactgcttt
     4501 actgctgcat aggaaaacgt catatcccgc cagtgatcaa taaatccatt cattgtctcc
     4561 cattcttcgg gcgtatagtc gctcagcaag tctgcatcat atttacctag cgcaactaat
     4621 tttttaacgt gctcatataa atgcggtggc tcaaattgtc cataagcttt tttgcgtaag
     4681 tggaaaatcg ccaagcgtgc ggctaaatat tgataatctg gcgtatcctt agtgattaga
     4741 tcagctgcag ccttgataat agtttcatga atatctgaag tgcgaatacc ttcataaaat
     4801 tgaatgtgag aacggagttc tacttgtgaa acagaaacat tctctaaccc ttctgccgcc
     4861 caagtaatca cacgatgaat tttatctaga ttgagttgct cgcgcgtgcc attacgcttt
     4921 gttaccatta aacttttatt cataattatt aaccctttat aaaatacctt agtaaaacac
     4981 tacatct
//
LOCUS       DANLXO010000135         4798 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.137, whole genome shotgun sequence.
ACCESSION   DANLXO010000135 DANLXO010000000
VERSION     DANLXO010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4798
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.137"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(4..570)
                     /locus_tag="PXD69_002425"
     CDS             complement(4..570)
                     /locus_tag="PXD69_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284569.1"
                     /translation="MEGLIMGLQLIPHFPELAISRRTYLHDMPMYCFVSKNWIFSAKD
                     RAKREALGNLLACGGEMMKSFIFKRSLFSEIWFEDILLEDEEKELIRILYNKPEPEYQ
                     VEEKIDWEAREARRKQADYDKWQSYDERNPFHYQIFPTDTIAYAQQQVEKFIEDVDNF
                     LEWFYDDEVKRYILERNEIYQKKFDLVN"
     gene            complement(1103..1429)
                     /locus_tag="PXD69_002426"
     CDS             complement(1103..1429)
                     /locus_tag="PXD69_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284570.1"
                     /translation="MLHSKGKILPKITLNEIETKERFAIALRKEMHAQYWTGKMVANA
                     LDVSEKTVKDWVAGKRLPSSLDLLALMRISSCVRQLVWDISKSEECYQDAEMLKQICF
                     VLLSNL"
     gene            1477..3108
                     /locus_tag="PXD69_002427"
     CDS             1477..3108
                     /locus_tag="PXD69_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDL6284571.1"
                     /translation="MVTRTKNQPKNQAVSYIRMSTEHQEFSPDLQRCFIENYAKENGL
                     EIIREYIDEGKSGLTAEHRPQFLSMIQLVQSGQADFDHILVYDVSRWGRFMNIDESGH
                     YELICTYQGIKVHYCAEPFKGNDIASQIYKTMKRLSVGDYCRELGVKVFNGQKNLIQH
                     GFRQGGVAGFGLRRRLIDCQGNPKFDLQRGDRKSLQTDRVILVAGPKEEQEIVRQIYH
                     DFVYQHKTEQQIADSLNAQGIVTDRNTAWTKGVVHQILINEKYVGHNVWNKRSASKTR
                     EYKGKNPVEEWVRAENVFEAIVPQALFNAAQTIIHQRSARLSDDEMLEQLKLLLKEKG
                     KLSGLIIDEAENCPSSSAYSSRFGSLLNTYTLINYEPERDYHYVEINRLLRQQHKNFV
                     QQTLDTIIELGGVVLSDDVTDLVHINNEFTASIVLSRCRLTPSGSKRWLIRFDTSLNP
                     DITIAVRINESATEILDYYLLPTTEKVNEKLRLAESNPAELEIYRHDNLDRFFIMVER
                     ILVKEFIYAKRHHSNSSYRQNSGTQSQNAQSESLC"
     gene            3023..3916
                     /locus_tag="PXD69_002428"
     CDS             3023..3916
                     /locus_tag="PXD69_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL6284572.1"
                     /translation="MQNDTIQILPIDKIRVLNPRTRNQKVFADLVENIATIGLKRPIT
                     VTPSVDSAEYYDLLCGQGRLEACQVLGELFIPCRVVNANSEESYLISLVENIARRQHS
                     YMELLSGIKILNDRGYKPVDIARKIGFSKSHVNSILHLINAGEERLINAVEQGILPIT
                     IAISISRSDDQEVQKQLAELYTNGTLKSTDIAKIRNLIHRRNLAGKKANTGISGSIRS
                     SIYNPKTVVNIYKEETERQKMMIKQADYDEKQLSIILSCLNKLFEDKYFQLVLKSEHL
                     DDMPKDLSQRMLKQREGNIYA"
     gene            3909..4772
                     /locus_tag="PXD69_002429"
     CDS             3909..4772
                     /locus_tag="PXD69_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL6284573.1"
                     /translation="MPKHITYAFHNQLISLPIDEIIPLKKMDKNFEKSTKFQSILASI
                     REIGIVEPVVVYPEENNQYILLDGHSRVHALKKLGVDKVLCMISTDDEGFTYNKQINR
                     LTAVQENKMLMKTIERGVSDELIARTLNINLKALRQKMNMLNGITREVVDILANKQVS
                     KEIFRILRKMKPERQIEVAQMMIASNKFTLTYANMMLLSSRKEELVESHKSKTTNDDL
                     TDLSIMQKELERLKENYKISEEKLADLKMGLVVAKGYVKKLLNNAAVVDLLENDQSEI
                     YLTLKEVCDIQ"
BASE COUNT         1575 a          922 c          931 g         1370 t
ORIGIN      
        1 attctagttc actaaatcga atttcttttg gtaaatctca ttcctttcta atatatagcg
       61 ttttacctca tcatcgtaaa accattcaag aaagttatca acatcttcaa tgaacttttc
      121 tacctgttgc tgtgcatatg ctatcgtatc ggtagggaag atttgataat gaaacggatt
      181 gcgttcatca taactctgcc atttgtcata atcggcttgt ttacgccgcg cttctcttgc
      241 ctcccagtcg attttttctt ccacttgata ttctggctct ggcttattat acaaaatacg
      301 gatgagttcc ttttcttcat cctcaagcag aatatcttca aaccagattt cagaaaatag
      361 gctgcgcttg aaaatgaaag acttcatcat ttcccctcca cacgccaata agtttcccaa
      421 tgcttcccgt ttcgctctat cttttgccga aaatatccag tttttcgata caaaacagta
      481 cattggcatg tcatgcaaat aggttcttcg tgaaatggct aattcaggaa aatgaggaat
      541 aagctgtaac cccattatta agccttccat actgcacacg atcttactta attgtccgta
      601 atcgcgtaaa aaagcaatgt cagtttttat caaccacaac gataggctga ctaatatgaa
      661 cataaagatg agataataga tcggttttaa ggctaaggcg cgccgacaaa gccacattaa
      721 gagtggaatc gtaacgagat caaagaaaaa tgatgagtct atgatgattt ccttatgtga
      781 gttgatgaat aatcaggcat gaaggaaacc ttaaaaagga aaagtccctt cattaccact
      841 ttttaaaacc ttttaaggct taaaaatcaa aagtcgtaat gaagggacta ttgtccgtgg
      901 gcaaaaaggt attagttata gggggctttg tcaagcgaaa atttactgtg cattttctcg
      961 ccaaaactga tttaagcctt gataaaatct cgaaagtacc ttgtcaagaa aaatcttttt
     1021 agtggtttga ttgctagttt tttgagcaaa actatgctgt aatgcagtaa aaatacagtt
     1081 tctatctgtg tttggaatcc agttacaaat tggagagtaa tacaaagcat atttgcttga
     1141 gcatctcagc atcttggtag cattcttctg attttgaaat atcccaaaca agctgccgta
     1201 cacatgatga aattctcatt aacgccaata aatctaggct acttggcaat cttttccctg
     1261 caacccaatc tttaactgtt ttctcactca catctaatgc attggcgacc attttccccg
     1321 tccaatattg agcatgcatt tcctttcgta acgcaattgc aaaccgctct ttcgtttcaa
     1381 tctcattgag tgtaattttg ggtaagattt taccctttga gtgcaacata tttcctcccg
     1441 attcctttat attggtgtag ataaggagtc attagaatgg ttacacgtac aaagaatcaa
     1501 cctaaaaatc aggcggtttc ctacattcga atgtcaacgg aacaccaaga attttcacca
     1561 gaccttcaac gttgctttat cgaaaattat gctaaagaaa atgggctaga aatcattaga
     1621 gaatacattg atgaaggaaa aagtgggcta accgcagaac accgcccaca attcctttca
     1681 atgatacaac tcgtacaaag tggacaagcc gacttcgatc atattttggt gtatgacgtg
     1741 agtcgttggg gtcggtttat gaatattgat gaatcggggc attatgaact gatttgtacc
     1801 taccaaggca ttaaagtcca ctattgcgcc gagccattca aagggaatga tattgcctct
     1861 caaatatata aaaccatgaa acgtttgtcg gtaggagact actgtcgtga actcggagtg
     1921 aaagtattta acggtcaaaa aaatctgatc caacatggat ttagacaagg tggggtagct
     1981 ggatttggat tgcgtaggag attgattgac tgtcaaggaa accctaaatt tgatctccaa
     2041 cgtggagata gaaagagcct acaaaccgac agagtgattt tggttgcagg cccaaaggaa
     2101 gagcaggaaa ttgtccgaca aatttaccat gattttgttt atcaacataa aacggaacaa
     2161 caaattgctg atagcttaaa tgcacaaggc attgttactg atagaaatac agcatggacg
     2221 aaaggcgtag tacatcaaat ccttattaac gaaaagtatg tcggccacaa tgtttggaat
     2281 aaacgtagtg catcaaaaac acgcgaatat aaaggtaaaa accccgtaga agagtgggtg
     2341 cgagctgaga atgtatttga agctatcgtg ccacaagcct tatttaatgc agcccaaacc
     2401 attattcatc aacgctccgc ccgattatct gacgatgaaa tgttagagca actcaagcta
     2461 cttttgaaag agaaagggaa gctgtctggc ttgatcattg atgaagccga aaattgtcca
     2521 tcaagtagcg cgtacagtag ccgatttgga agcctactta acacatatac tttaattaac
     2581 tatgaacccg aacgggatta ccactatgta gagatcaacc gattactccg tcagcagcat
     2641 aaaaatttcg tacaacaaac acttgatacc attattgaat tggggggagt ggttttgagc
     2701 gatgatgtaa ccgatttagt ccacatcaat aatgaattta ccgcctcaat cgtattaagt
     2761 cgttgtcgcc taacgccatc aggaagcaaa agatggttga tccgatttga taccagttta
     2821 aatcccgaca taacaattgc agtgcgcatc aatgagagtg ccacagaaat tcttgattac
     2881 tacctgcttc ccacaactga aaaggtaaat gaaaaactac gattggctga gagtaatcct
     2941 gccgaacttg aaatctaccg ccatgataat ttagatcgct tttttattat ggttgaacgt
     3001 attttagtca aggagtttat ctatgcaaaa cgacaccatt caaattcttc ctatcgacaa
     3061 aattcgggta ctcaatccca gaacgcgcaa tcagaaagtc tttgctgatc tggtcgaaaa
     3121 cattgcaacg attggtctca agagacctat taccgtaacg ccatctgtcg atagtgctga
     3181 atattatgat ttgttatgcg gtcaaggtcg gcttgaggct tgtcaggtgc ttggtgagct
     3241 attcatacct tgtcgcgttg tgaacgcaaa tagtgaagaa agctacttga tcagccttgt
     3301 ggaaaatatt gccagacgtc agcattccta tatggagctg ctttcaggca tcaaaatact
     3361 caatgataga ggttataagc ccgttgatat tgctcgcaaa atcggtttct caaaaagcca
     3421 tgtcaacagt atcttacacc tcatcaatgc tggggaagag cgccttatca atgcggtaga
     3481 gcaaggaatt ttacccatta ccatcgctat ttcgatttct cgttcagacg atcaggaagt
     3541 tcaaaaacaa ctcgcggaac tttacaccaa tggtacattg aaaagcaccg atattgccaa
     3601 aatacgtaac ctgatccacc gtagaaatct tgctggtaag aaagccaata caggtatttc
     3661 tggaagtatt agatcatcta tttataatcc caaaactgtg gtgaatatct acaaagagga
     3721 aacggaaaga cagaaaatga tgatcaagca agcggactat gatgaaaaac aactctctat
     3781 tatcttgtct tgcttaaata aactctttga ggacaaatac tttcaactcg tccttaaatc
     3841 agaacattta gacgatatgc caaaagattt aagccaacga atgttaaaac aacgagaggg
     3901 aaatatttat gcctaaacat attacttatg cctttcataa tcagttaatt tcgcttccaa
     3961 ttgatgagat tattccatta aaaaagatgg ataaaaattt tgagaaaagc actaagttcc
     4021 aaagcattct ggcttcaatt cgtgaaatcg ggattgttga acctgtggtc gtctatccag
     4081 aagaaaacaa ccaatatatt ttgttagatg gccattctcg tgtacatgca ctcaaaaagc
     4141 taggtgtgga taaggtgctt tgtatgattt ctaccgatga tgaaggcttt acttacaaca
     4201 agcaaattaa ccgcttaacc gccgttcagg aaaataaaat gctgatgaaa accattgagc
     4261 gcggggtttc ggatgaactg atcgcaagaa cactcaatat caatctaaaa gcactacggc
     4321 agaaaatgaa tatgcttaat gggatcacaa gagaggttgt tgatatattg gccaataagc
     4381 aggtcagtaa agagatattt cggattttgc gcaagatgaa gcctgaacgc caaattgaag
     4441 tggcacaaat gatgatcgcc agtaataagt ttacattgac atacgccaat atgatgttgc
     4501 tcagttcacg caaggaggaa ttagtcgaaa gccacaagtc taaaaccacg aatgatgatt
     4561 taaccgatct ttccattatg caaaaagagc tagagcgact taaagagaac tataaaattt
     4621 ccgaagagaa attggcggac ttaaaaatgg gattggttgt ggcgaaaggg tatgtcaaaa
     4681 aactattgaa taatgctgcc gtggtagatt tgcttgaaaa tgatcagagt gaaatctatc
     4741 ttactcttaa agaagtatgt gatattcaat aatataatat ctagctaata accttaat
//
LOCUS       DANLXO010000136         4782 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.138, whole genome shotgun sequence.
ACCESSION   DANLXO010000136 DANLXO010000000
VERSION     DANLXO010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4782
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.138"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            33..410
                     /locus_tag="PXD69_002430"
     CDS             33..410
                     /locus_tag="PXD69_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284574.1"
                     /translation="MAAEIELSEARTTLDELGFTSPNSLLELYVQQTNTLDQALNKSG
                     YSEETQKLIKLYLVAILAISSGARRIKSEGAPSGASRTFEYDPNALDNLKSAIRSIDP
                     KGCAESLLPKDKVVGFFDVVGGC"
     gene            410..754
                     /locus_tag="PXD69_002431"
     CDS             410..754
                     /locus_tag="PXD69_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284575.1"
                     /translation="MSNLSNWSYTAKATLWQAKGKNDDGVLVFSTPQIISCDYGADRK
                     RARFEIGREQAVKNVIWTEFAHAKLGDYVLIGESEQADPILAGAEEIIHIQRFADTFD
                     RNRDDFALITGG"
     gene            756..1124
                     /locus_tag="PXD69_002432"
     CDS             756..1124
                     /locus_tag="PXD69_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL6284576.1"
                     /translation="MGIKVKGIRQVKQRLNQVVGEVQSQKATRAMFRILNAVAPLAAH
                     YTPVDTSTLINSQFTEMEVNGTRLIGRVGYSANYAAYVHDPNIKQNFRKPSAKKEFLT
                     SALNESKATIKSIVKEELSL"
     gene            1121..1501
                     /locus_tag="PXD69_002433"
     CDS             1121..1501
                     /locus_tag="PXD69_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284577.1"
                     /translation="MISYVKAFKQWLEAHSLADGYVVQLYQWEDTQKAKPVIVIQPNS
                     GSPQVSDLSSEHYLLISLVAGKNSGYTIEERARAIMSKILVEPFASFGYIESMGGLPA
                     PIFTEDNRMIFRLPLRIISTNQEE"
     gene            1505..1987
                     /locus_tag="PXD69_002434"
     CDS             1505..1987
                     /locus_tag="PXD69_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284578.1"
                     /translation="MGSPSPQNNAENLVVGRAVVLEYGTTDAKPQESEWKVAGAMTTK
                     SWDFSPNSVTSEADDAGGFPETLITNSDFSISGDGEWRKRPKSKELGIKDLVVLYANA
                     VKNRTQPYIWVRLKYAGLTILGKMVITALSSEAPTNDLVKFSIEFKVGDSSTIEIAAA
                     "
     gene            complement(2027..2443)
                     /locus_tag="PXD69_002435"
     CDS             complement(2027..2443)
                     /locus_tag="PXD69_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL6284579.1"
                     /translation="MFYPALFTPAEEGGFVVTFPDLPEAITQGDTFEEAMEMAEDVLL
                     SCVEIYFDEDRRFPLTRPVNTDEVPVFMPESIYAKVLLHNTMQEQAVSKAEIARLTNI
                     RPPEVQRILAPRHITKIDTIGRILASLGKPLQLSLG"
     gene            complement(2499..2675)
                     /locus_tag="PXD69_002436"
     CDS             complement(2499..2675)
                     /locus_tag="PXD69_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010848235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL6284580.1"
                     /translation="MKQSEFLRWLKANGVEVENGSKHLKLYYKGKRSHLPKHPSQELK
                     TGLVEGVKKQLGLK"
     gene            2771..3442
                     /locus_tag="PXD69_002437"
     CDS             2771..3442
                     /locus_tag="PXD69_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284581.1"
                     /translation="MKMVSYPITEIGEMLIATDGRDFLFRPSFKNIYKIGSPQEIVKI
                     YALLHGCEIREILPHILTKSESHQSYFWSVLNSPVFGRKILQNAMIVMSCCCDDDISL
                     LIGEWLPSKSGVRYKLGKMPPETIINFAKNLMGHGVIGCCELPKKEQSAKNEFSESFD
                     AVEYISLARTHFNMSREDAENLTMTELQQLLKSQMPAENNSYGQFTEEEYDRIMAEYE
                     KRRAA"
     gene            complement(3457..3690)
                     /locus_tag="PXD69_002438"
     CDS             complement(3457..3690)
                     /locus_tag="PXD69_002438"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284582.1"
                     /translation="MKKDCTKQDFANWLNENQEVCWIKEVSIERILSCVDDYVAICNA
                     RSKDEFELLNDIRELFYSAHYKDFTPVLSGRFF"
     gene            3859..4317
                     /locus_tag="PXD69_002439"
     CDS             3859..4317
                     /locus_tag="PXD69_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284583.1"
                     /translation="MKKMIVFVASVLSSFVIASDWEIIEAAQNKVKAELIRKSEKKAE
                     LCLNVAQAVLITNQKVQKDTFSMCGEFSTEIVFSDSKAYSLAVCGKVKGKDIIGNPIE
                     SDYIYQRATKDFYFNYNGKKSAYYDPQSDLARLQEVSDSMFNAMQNRYCK"
BASE COUNT         1459 a          894 c         1035 g         1394 t
ORIGIN      
        1 cagaaaggca aaaaagataa aggcaaataa ctatggcagc agaaatagag ctatccgaag
       61 cgcgaacaac gcttgacgaa ctgggtttca cttcgccgaa ctctctgctt gagctttacg
      121 ttcagcaaac gaacacctta gaccaggcgt tgaacaaatc ggggtacagc gaagaaacac
      181 agaaactgat caagctctat ctggttgcta ttcttgcaat ttcatctggg gcgcgccgta
      241 taaagtcaga aggtgcgcct agcggtgcaa gccgaacgtt tgagtatgat ccaaacgcgc
      301 tagacaacct taagtcggcg attcgctcaa ttgatccgaa aggttgcgct gaaagtttgc
      361 tacccaaaga taaagttgtc ggctttttcg atgtggtcgg aggctgctaa tgtcaaattt
      421 atcgaattgg tcctacaccg caaaagccac gctttggcag gctaaaggaa agaacgatga
      481 cggcgtttta gttttttcta cgccacaaat catttcctgt gactacggtg cagatagaaa
      541 gcgcgcacgt tttgagattg ggcgtgaaca agcggtcaaa aatgtgatct ggacggagtt
      601 cgcccacgcc aaattaggcg attatgttct gattggcgaa agcgagcaag ccgatccgat
      661 tttggctggc gcagaggaaa ttattcatat acagcgcttt gctgatacgt tcgaccgcaa
      721 tcgtgatgat tttgcgctga taacaggcgg gtaaaatggg gatcaaagta aaaggcataa
      781 gacaggtcaa gcagcggctg aatcaggttg ttggcgaggt tcagagccaa aaagcaactc
      841 gggcaatgtt tcgcattttg aatgcggttg cccctcttgc ggcgcactat acgcctgttg
      901 atacctcaac gttgatcaac agtcaattca ctgaaatgga agtgaacggc acacgcttga
      961 ttggaagagt gggttattct gctaattatg cggcttacgt tcacgatcct aatatcaagc
     1021 aaaacttccg caagccttca gcgaagaaag agtttttgac ttccgcgctg aacgaatcaa
     1081 aggctacgat caaatccatt gttaaagagg agttgtcact atgatttctt atgtcaaagc
     1141 cttcaaacaa tggttagagg ctcactctct tgcagacggc tatgttgtgc agctttacca
     1201 gtgggaggat acgcaaaaag ccaagcctgt tattgttatt cagccaaata gtggttcgcc
     1261 gcaagtttct gacctgagca gcgaacacta tctgctaatt agccttgttg caggtaaaaa
     1321 ttcaggttac acaatcgaag agcgagcaag ggcgattatg tcaaagattt tagttgagcc
     1381 tttcgcttcc tttggttaca tcgaatcaat gggcggatta cccgccccaa ttttcaccga
     1441 agataatcga atgatttttc gcttaccact tcggattatt tcaacaaatc aagaggagta
     1501 gtttatgggt tctccatctc cacaaaataa cgcagaaaat ctcgtggtgg ggcgtgccgt
     1561 agttttagag tacggtacga ctgatgcaaa gccacaagaa agcgaatgga aggttgcggg
     1621 cgcaatgacg acaaagagtt gggattttag cccaaattcg gttacatcag aggctgatga
     1681 tgctggcggc ttccctgaaa ccttaattac aaactcagac tttagtattt ctggtgacgg
     1741 tgagtggcgc aaacgaccaa aatcgaaaga actaggcatc aaagatctag ttgtgttata
     1801 cgcaaatgcg gtaaaaaatc gcacccaacc ttacatttgg gttcgtttga aatacgcagg
     1861 cttaacaatt ctcggaaaaa tggttatcac tgcattaagt agcgaagccc caaccaatga
     1921 cttagtgaaa ttctctatag agttcaaggt tggcgattca agcactatcg aaattgctgc
     1981 agcgtaaaaa atcccaccct ctataacaag agcggtggga ttatcattat cctagggata
     2041 gttgtagggg ctttcctaag ctagccaaaa tacgaccaat agtgtcgatt tttgtaatat
     2101 ggcgaggggc taaaattcgc tgtacttctg gcggacggat attagttaat cgggcaattt
     2161 ctgccttgct taccgcttgt tcttgcattg tattatgcaa aagcactttt gcgtagatgc
     2221 tctctggcat aaacacaggc acttcgtcgg tatttactgg gcgagtgagc ggaaagcgtc
     2281 tatcttcatc gaaataaatt tcaacacaag atagtagcac gtcttctgcc atttccattg
     2341 cttcttcaaa tgtatcgcct tgggtgatag cttctggcaa atcaggaaat gtcactacaa
     2401 agcccccttc ttcagcgggg gtaaataacg ctggataaaa catattttct ccttattcaa
     2461 gggtgtagtg aaagcccctt aacatcaggg gctttatatt attttaagcc tagttgcttt
     2521 ttaacccctt ccactaagcc tgtttttaac tcttggcttg ggtgtttggg gaggtggctt
     2581 cttttgccct tgtagtagag tttcaaatgc tttgatccat tttcaacctc taccccatta
     2641 gcctttagcc accttaggaa ttcgctttgc ttcactacct cctcctattt gtttaacttg
     2701 ggttcattat atgcaaaaat gctaactttg tcaacagaaa gttagcaaaa atgctaattt
     2761 ttttgttgag gtgaaaatgg ttagctatcc aattactgaa attggtgaaa tgcttattgc
     2821 aaccgatggg cgagactttt tattcagacc gagtttcaaa aatatctaca aaattggaag
     2881 cccacaagaa attgtaaaaa tctatgcact attgcacggc tgtgagattc gagagatatt
     2941 gccgcacatt ttaaccaaat cggagtctca tcaatcttac ttttggtcag tgctgaattc
     3001 gcctgttttt ggcagaaaaa ttctgcaaaa cgcaatgatc gtgatgtcgt gctgttgcga
     3061 tgatgatatt tccctgttga ttggcgagtg gttgccgtca aagtctggcg ttaggtacaa
     3121 gttgggtaaa atgccacctg agacaattat caattttgca aaaaatttaa tgggtcacgg
     3181 agtgattggt tgctgcgaat tgccaaagaa agaacaatct gcaaaaaatg aattttcaga
     3241 aagttttgat gctgttgagt acataagttt agcccgaact catttcaata tgagccgcga
     3301 agacgctgaa aatctcacga tgaccgaatt gcagcaactt ctaaaaagtc aaatgcctgc
     3361 cgaaaataat agctatggac agttcaccga agaagagtac gacagaatta tggcggaata
     3421 tgagaaaaga agagcggctt aaatagccgc taacatttaa aagaacctac ctgatagaac
     3481 gggagtgaaa tccttgtaat gtgctgaata aaaaagctct cttatgtcat tgagtagctc
     3541 aaattcatct ttggatcttg cgttgcagat tgccacatag tcatctacgc aggataaaat
     3601 acgttcaata ctgacttctt ttatccagca tacttcttgg ttttcattca gccagttggc
     3661 aaagtcttgt ttagtgcagt cttttttcat aagttctcct ttttgattat ttgcaaaaaa
     3721 aatcatatca aatcatccgt tgttatctat tggcgaaaat aatttttgcg acacagatcg
     3781 caaaaatagg ttttgacggt ggaaaaacga atcttaattc gtagaatggt aaaatttctt
     3841 tatttttaag gtatttttat gaaaaaaatg attgtttttg tagcttctgt tttgtcatct
     3901 tttgttattg catcggattg ggaaataata gaagcggctc aaaataaggt gaaagcagag
     3961 cttataagaa aatcagaaaa aaaagcagag ttatgtttaa atgttgctca ggctgtctta
     4021 attactaatc aaaaagtaca aaaagatact ttctcaatgt gtggtgaatt ttcgacagag
     4081 attgtctttt ctgactctaa agcatatagc cttgcagtat gtggaaaggt taaaggtaaa
     4141 gatattatcg gaaatccgat agagagcgac tatatatacc aaagagcaac taaggatttt
     4201 tactttaatt ataatggcaa aaaatcagct tattatgatc ctcaatctga tcttgcaagg
     4261 cttcaagagg tctcagactc tatgtttaat gctatgcaaa atagatattg taagtgatgc
     4321 ttgcattggt ttttaaatat ttaactcaaa taatttatgt gtttttagtt taatagggcg
     4381 atttatggat gtaaaggtaa ttaacgtctt actaattatt cttttttcag caattgtaat
     4441 aggtttattc ctttttcaag aatcaagatt aagagatcca aacaaccatt cagtgatata
     4501 tttagagcag attcaagaaa tgtgcagctt agataaaata ggctcatacc agattgattt
     4561 tgtacgacaa agtgggaatg agtacaaaga gagtattctt gttaatgatt ttgagttagc
     4621 aataaaaacc gtattatcca cgttaagaag ggcaaaaata gatagtgtgc cagtaatatc
     4681 taacacactt atttattatc caccgagctt tctacaacgc aagaggtagt caagaaggaa
     4741 agaaattagg atcgataagg attgcaaaaa tttaatgtaa ca
//
LOCUS       DANLXO010000137         4760 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.139, whole genome shotgun sequence.
ACCESSION   DANLXO010000137 DANLXO010000000
VERSION     DANLXO010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4760
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.139"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(2..787)
                     /gene="znuB"
                     /locus_tag="PXD69_002440"
     CDS             complement(2..787)
                     /gene="znuB"
                     /locus_tag="PXD69_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HDL6284584.1"
                     /translation="MFDILFPAWLAGVLLAFITAPLGAFVVWRKMAYFGDTLSHSALL
                     GVALGIFLELDPYLAVIGMTILLALLLVWLEQKTNYSVDTVLGIIAHTSLSLGVITIS
                     LLDNVRVDLMSYLFGDLLAINFSDVVFIGIGATLICLILMLFWKRLLSITISPELAQI
                     EGLNVARLRLLLMILTALTIALSMKFVGALIITSLLIIPSATARRFAKTPEKMVLIAI
                     FFSIIAVSGGLLLSSWKDTPAGPSVVICAGLIFLLSLFKKEYH"
     gene            complement(874..2211)
                     /locus_tag="PXD69_002441"
     CDS             complement(874..2211)
                     /locus_tag="PXD69_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000067755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDL6284585.1"
                     /translation="MSSLSFDFSEDFRPLAAKMRPRNLAEYVGQSHLIGEGKPLRRAI
                     EAGHSHSMIFWGPPGTGKTTLAEIIAHHLDAEVERISAVTSGVKEIREVIEQAKLNRQ
                     AGRRTLLFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARIYI
                     LKPLQAVEILKILQMAIADTERGLGNETLVLEDDVLALLADYVNGDARFALNCLELMV
                     DMAQDSAKGKVLNKSLLTEVLGERQARFDKGGDRYYDLISALHKSIRGSSADGALYWY
                     ARILTAGGDPLYVARRLLAIASEDIGNADPRAMQIAIVAWDCFTRVGAYEGERAIAQA
                     IIYLAVAPKSNAVYQAFNEAKRLAKEAKDYDVPAHLRNAPTQLMKSLGYGEEYRYAHN
                     EPNAYAAGENYFPPELKDTEFYFPSERGMEKQIKEKMAWLKAQDQASPIQRYK"
     gene            complement(2221..2709)
                     /gene="mreD"
                     /locus_tag="PXD69_002442"
     CDS             complement(2221..2709)
                     /gene="mreD"
                     /locus_tag="PXD69_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDL6284586.1"
                     /translation="MRTNPIFQILVIIAIFVVAFVLEIMPWPVGFQGLRPTWVVLVLI
                     YWALALPDKMSVGTAFIAGIVWDLILGSILGIHALVLSVAIYFVAKYHLILRNLSLWL
                     QSLLVMAYIVLIRFFIFVIEYILHSAEFNSQELLGAVISGVLWSWIFLLMRHIRRQLR
                     LR"
     gene            complement(2709..3764)
                     /gene="mreC"
                     /locus_tag="PXD69_002443"
     CDS             complement(2709..3764)
                     /gene="mreC"
                     /locus_tag="PXD69_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDL6284587.1"
                     /translation="MKPIFAKAPSLGMRLIIAVIFSIMLIISDGRSSLMIQARNLLET
                     AVSGLYYFANTPRSILDGVSGNFIDNNKLQLENNLLKEQLREKSADLLLLDQLKVENQ
                     RLRLLLSSPLRQDEYKKIAEVLAAEMDAYRQQVVINQGRLDGAFVGQPIIDERGVVGQ
                     VISVGEKSSRVLLLSDITHAIPVQVLRNDVRGIASGTGVNNELVIDNLPRSIDVVKGD
                     VLVTSGLGGRFPEGYPVAIVETVENDTKSQFARIVARPLASFDRLRYLLLLWPTAEEK
                     NYSQSLSPAQVREVVEERRNSVNPFERLKQMSNKKTEVQLEAKEEQIENDEINENPAA
                     QPEAENEQNYHTEEGAE"
     gene            complement(3866..>4760)
                     /locus_tag="PXD69_002444"
     CDS             complement(3866..>4760)
                     /locus_tag="PXD69_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDL6284588.1"
                     /translation="AVGSHAKLMLGRTPKSIMAIRPMKDGVIADFFVTEKMLQHFIKQ
                     VHSNNFMRPSPRVLVCVPAGATQVERRAIKESAIGAGAREVYLIEEPMAAAIGAGLPV
                     HEAMGSMVIDIGGGTTEVAVLSLNGIVYSTSVRIGGDKLDEAIIAYVRRHFGSAIGEA
                     TAERIKQEIASAKIESDDDVKTMEVHGHNLAEGAPRTFELNSRHVLEAIEQPLNGIVE
                     AVKSVLEQCPPELAADIFERGMVLTGGGALLHNLDRLLSDSTGVQVVVAEDPLTCVAR
                     GGGKALEMIDMHGGDVFSIDD"
BASE COUNT         1467 a         1134 c          848 g         1311 t
ORIGIN      
        1 tttaatggta ttcttttttg aatagcgata atagaaaaat caagccggca caaatgacta
       61 ccgaaggccc tgctggtgta tctttccaac tggataacaa taaaccgcca ctgactgcaa
      121 taatactgaa gaaaatcgca atcaacacca ttttttcagg cgttttagca aagcgtcttg
      181 ccgtagcaga cggaataatc agcagtgagg taataattaa agcaccgaca aatttcatac
      241 ttaatgcgat agttaatgcg gttaaaatca tcagcaataa acgtaagcga gccacattta
      301 atccttcaat ttgagcaagt tccgggctga tggtaatcga caacaaccgc ttccaaaaca
      361 gcattaaaat caaacaaatt agggttgctc cgattccgat aaacaccaca tcagaaaaat
      421 taattgccag taaatcgccg aataagtaag acatcaaatc cactcgtaca ttatccaaca
      481 aactaatggt aattaccccg agagaaaggc tagtatgggc gataatcccc aacacggtat
      541 ccaccgaata attggttttt tgctccaacc aaaccagcaa taatgcaaga agaatagtca
      601 ttccaattac agcaagatac ggatcgagtt ctaaaaaaat ccctaatgcc acgccgagca
      661 atgcagagtg cgaaagtgtg tcgccgaaat acgccatttt tcgccacacc acaaaagccc
      721 ctagaggtgc ggtaataaag gctaacaaaa caccggcaag ccaagccgga aataaaatat
      781 caaacatatt ggttctcaaa ggcaagtaaa acaagcggtt attttttcgg aaaaatttgc
      841 aaattttttg ctgatttaga ccgcttgtca tatttattta taacgttgaa tcgggctggc
      901 ttgatcctgt gctttcagcc acgccatttt ttctttaatc tgtttttcca ttccccgctc
      961 acttgggaag tagaattcgg tatctttcag ctcaggcggg aaataattct ccccggcggc
     1021 ataagcgttt ggctcattgt gggcatagcg atactcttcg ccatagccta aagatttcat
     1081 taattgagtg ggagcattac gcaaatgcgc cggcacatcg tagtcttttg cctctttagc
     1141 gaggcgcttt gcttcattaa aagcttgata gaccgcattg ctctttgggg caactgccaa
     1201 ataaatgatc gcttgggcaa tcgctctttc accttcataa gcccccactc gggtaaagca
     1261 atcccaagcc acaatcgcaa tttgcattgc tcgagggtcg gcattaccaa tatcttcaga
     1321 agcaatcgca agcagccttc ttgccacata aagcggatca ccaccggcgg ttaaaattcg
     1381 ggcataccag tataatgctc catcagccga tgagcctcga atggatttat gtaacgcaga
     1441 aatgagatca tagtaacgat caccgccttt atcaaaacga gcttgtcgtt cgcctaacac
     1501 ttcggtcagc aaacttttat tcagcacttt ccctttagct gaatcttgtg ccatatctac
     1561 cattaattcc aaacagttca aggcaaaacg ggcatcacca ttaacataat cagcaagcaa
     1621 tgccagtaca tcatcttcaa gtaccaaagt ttcattgcct aaaccacgtt cggtatcggc
     1681 tatcgccatt tgcaaaattt ttagaatttc gaccgcttgt aacggcttta aaatataaat
     1741 tctggctcgg gaaagcagtg cgttatttag ctcaaaagag ggattttcgg tagtcgcacc
     1801 aataaaaata atagtgccgt cctcaatatg cggtaaaaac gcatcttgct ggcttttgtt
     1861 aaagcggtga acttcatcca caaaaagcaa cgttcgtctg ccggcttggc ggtttaattt
     1921 ggcttgttca atcacctctc ggatctcttt tacaccgctg gtcacagcgg aaatacgttc
     1981 aacttccgca tcaagatgat gggcgataat ttcagctagg gtcgtttttc cggtgccggg
     2041 cggtccccaa aaaatcatag aatgactatg tccggcttca atcgctctgc gtaacggttt
     2101 gccttcgcca attaaatgag attgcccgac atattcagcc aagtttcgag gtcgcatttt
     2161 ggctgcaagc ggtcgaaaat cttcactaaa atcaaaagac aaactactca ttttaacctc
     2221 ttaacgtaac cgcagttggc gacgaatatg acgcattaat aagaaaatcc aagaccaaag
     2281 cacaccactg attacagcac ctaacaattc ctgtgaatta aattcggcac tgtgtaaaat
     2341 gtattcaatc acgaaaataa agaaacggat cagcacaata tatgccatta ctaataggct
     2401 ttgtagccat agcgataagt ttcgcagaat cagatggtat ttcgcaacaa aataaatcgc
     2461 caccgataac actaaggcgt ggatgcctaa aatcgagcca agaatcagat cccagacgat
     2521 gccggcaata aaagccgtcc ccacactcat tttatcaggt aatgccaatg cccaataaat
     2581 taacaccaaa acgacccaag tagggcgtag cccttggaat cctaccggcc aaggcataat
     2641 ctcaagtaca aaagcaacca caaaaatcgc aattatcaca aggatctgaa aaatcgggtt
     2701 tgttctcatt attccgctcc ttcttccgta tgatagtttt gttcattttc cgcttctggt
     2761 tgtgctgccg gattctcatt tatctcatca ttctctattt gttcttcttt tgcctctagc
     2821 tgcacttcag ttttcttgtt agacatctgt tttaaacgtt caaatggatt cacgctatta
     2881 cgtctttctt caacaacttc acgtacttgc gctggcgaca agctttggga gtagtttttc
     2941 tcttccgccg tcggccaaag cagtaataag taacgtaagc gatcaaatga ggctaacgga
     3001 cgagcaacaa ttctggcaaa ttgacttttg gtatcatttt caaccgtttc tacaatcgcc
     3061 accggatatc cctcagggaa acgtccacct aagcctgaag tcaccagcac atcacctttt
     3121 accacatcaa tagaacgagg caagttatca atgaccaatt cattattcac ccctgtacca
     3181 ctggcaatgc cacgtacatc attgcgtagc acttgaacag gaatagcatg agtaatatca
     3241 gagagcaata aaacacggct agatttttcc cctacagaaa taacttgtcc aacaacacct
     3301 ctttcatcaa taataggttg cccgacaaaa gcaccgtcta aacgcccttg attaatcact
     3361 acttgctgac gataagcatc catctcagca gctaatactt cagcaatttt tttatactca
     3421 tcttgccgaa gcggagaact caataacaat cttaaacgct gattttcaac ctttagctga
     3481 tcaagcaata ataaatcggc acttttttct cttagctgct cttttaataa attattctca
     3541 agctgtaatt tattattatc aataaaattg ccacttaccc catctaaaat tgaacggggg
     3601 gtattagcaa aataatataa tccacttacc gcggtttcta atagattacg cgcttgaatc
     3661 attaaagagc tacgcccatc ggaaataatc agcataatag aaaatatcac tgcgataatc
     3721 aggcgcatcc ctaaagaggg agctttagca aaaataggtt tcattagaga aatatatgtg
     3781 aatttattgg gaatctataa cgaaaattga caatagaatc aatccattgc caacctccat
     3841 ttaaacagct gctaagagaa atgtattaat catcaatact aaatacatca ccaccgtgca
     3901 tatcgatcat ttctaatgct ttaccaccac cacgagctac acaagttaat ggatcttctg
     3961 ctactacgac ttgcacgcca gttgaatcag aaagtaaacg atctaaatta tgtaataatg
     4021 caccacctcc tgttaacacc ataccgcgct caaaaatgtc tgctgccaat tcaggtgggc
     4081 attgctctaa gactgattta actgcctcta caataccatt taatggttgt tcaattgctt
     4141 ctaatacatg tcttgagtta agctcgaaag tacgaggagc gccttcagct aaattgtgtc
     4201 cgtgtacttc cattgtttta acatcatcat cggattcaat cttagcacta gcaatttctt
     4261 gtttaattcg ctctgccgtt gcttcaccaa tagcagaacc aaaatgacga cgtacataag
     4321 caataatagc ttcatctaac ttatcaccac caatacgcac agaagttgaa tacacaatgc
     4381 cgtttaaaga aagcactgcc acttcggttg taccgccacc aatgtcaatt accattgacc
     4441 ccattgcttc gtgaaccggc aaacctgcac cgattgcagc cgccattggc tcttcaatta
     4501 aatagacttc acgcgctcct gctccaattg cagattcttt aattgcacgg cgttccactt
     4561 gtgttgcacc tgctggcacg cacactaata cacgagggct tgggcgcata aagttattac
     4621 tatgtacttg tttaataaag tgttgcaaca ttttttctgt tacaaaaaaa tccgcaatga
     4681 caccatcttt cattggacga atcgccatta tgctttttgg tgtacggcct agcattaatt
     4741 ttgcatgtga gcctaccgcc
//
LOCUS       DANLXO010000138         4710 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.140, whole genome shotgun sequence.
ACCESSION   DANLXO010000138 DANLXO010000000
VERSION     DANLXO010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4710
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.140"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            10..708
                     /gene="aphA"
                     /locus_tag="PXD69_002445"
     CDS             10..708
                     /gene="aphA"
                     /locus_tag="PXD69_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HDL6284589.1"
                     /translation="MTAATMFASLIAFSAQAGGPKVAYTQPGIDMRTHEAQQAPIHWV
                     SIEQIKESIKDLPPMAVSFDIDDTVAATSGCFHYGKQKYSPDDFSYLKNQDFWDEINA
                     GCDKYSLPKQVAINLIKMHQERGDQVYLITGRTAGKNEQVTTIMQKYLGIKNMQPVNF
                     MGGKAHSTKYDKTPAIIEHKVQIHYGDSDDDILAAREAGIRGIRILRAANSNYTPFPQ
                     AGGYGEEVVVNSSY"
     gene            889..1650
                     /gene="udp"
                     /locus_tag="PXD69_002446"
     CDS             889..1650
                     /gene="udp"
                     /locus_tag="PXD69_002446"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HDL6284590.1"
                     /translation="MSEVFHLGLTKAMLKGAKIAIVPGDPARSERIAKKMDNPEFLAS
                     TREFTSWLGYLDGEPVVVCSTGIGGPSVSICVEELAQLGVRTFLRIGTTGAIQEHINV
                     GDILITTGAVRLDGASQHFAPMEYPAVANFECTNALYAAAVESGVTPYVGITASSDTF
                     YPGQERYDTFTGKIYRHFQGSLKQWQDLNVMNFEMESATLFTMCSALGLRAGMVAGVI
                     VNRTQQEIPNEATIHDTEHKAVSVVVEAARKLIKG"
     gene            1725..2310
                     /locus_tag="PXD69_002447"
                     /pseudo
     CDS             1725..2310
                     /locus_tag="PXD69_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248263.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2321..2806
                     /locus_tag="PXD69_002448"
     CDS             2321..2806
                     /locus_tag="PXD69_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HDL6284591.1"
                     /translation="MYSLYLKILSECDWCCDPKTLSTYQQEWLLHEGSLTQKLYDVAT
                     NFNVEVVQEKWIAKNSEKTTACNEDVWSREVLLKDGEKNWIFAQTLVPRSTIENIAQN
                     VLELGNQPIGLWLFSQNPTRTKLEWTQTENGLFARRGVYEIRGYSLEIRELFLETFPY
                     L"
     gene            complement(2844..3713)
                     /locus_tag="PXD69_002449"
     CDS             complement(2844..3713)
                     /locus_tag="PXD69_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL6284592.1"
                     /translation="MKNINTQAVGWIGLGQMGEPMAKHLLNSGVNVGVYNRDPAKAEK
                     VVEAGGTLYPSVLELVKAYDVIFLMIADYAAVQQVLSDEVLAELNGKVVVNMSTISPS
                     QNQAVEALLAQHGAEFVEAPVSGSSKVAEAGKLLVLAAGKEETVELLKPLFAAFSTTT
                     FYYGEVGKAGGIKLMINSLLGIFIQAYGEALNFADQYGIPKEKVIEMISGSFMNSPIF
                     QAKVPMYQANEFPPAFMMKHMTKDFNLASEEIAKLGKSYPLIEQATKTYNQANDSGLS
                     EVDMAAIYQFLAK"
     gene            3843..4634
                     /locus_tag="PXD69_002450"
     CDS             3843..4634
                     /locus_tag="PXD69_002450"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDL6284593.1"
                     /translation="MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEK
                     SEAVLIERAVKIVQKIAEKQPLDMVVVACNTASTVVLPALREHFNFPIVGTVPAIKPA
                     AAISETKVIGLLATKGTVARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVD
                     MNRLQKVVEAWQGKPELDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSL
                     LEERKFQQKADFENQAFCTKQSSAFNIKQDVMQNWGFNNLSVIDI"
BASE COUNT         1451 a          872 c          989 g         1398 t
ORIGIN      
        1 acattaaaaa tgacggcagc gacaatgttt gcatctctta ttgctttttc agcacaagca
       61 ggcggaccaa aagtagctta tacccagccg ggaattgata tgcgaacaca tgaagcacag
      121 caagcgccaa ttcattgggt atctattgag caaattaaag aaagcatcaa agatttaccc
      181 cctatggcgg taagttttga tattgatgat actgttgctg caactagcgg ttgcttccac
      241 tacggaaagc aaaaatattc gccagacgat ttcagctact taaaaaatca agatttttgg
      301 gacgaaatta atgctggctg tgataaatat tctttgccaa agcaagttgc tattaattta
      361 ataaaaatgc accaagaacg tggtgatcaa gtttatttaa ttacggggcg taccgcaggt
      421 aaaaatgaac aagttacaac gattatgcaa aagtatcttg gtattaaaaa tatgcaaccg
      481 gtaaatttta tgggggggaa agcacattca acaaaatatg ataaaacccc tgcgattatt
      541 gaacataagg tgcaaattca ctatggtgac agtgatgatg atatcttagc tgcccgtgaa
      601 gccggtattc gaggtattcg tatacttcgt gcagcaaatt ctaattatac gccattccct
      661 caggccggag gatatggtga agaagttgtt gtcaattcaa gttattaatt tcttagtctg
      721 aaatatggcc accattgcgt ggccatcatt ttttatttat ataatgacga aaccgtttac
      781 ctttgatcta gttcacaaaa tcaaactttg cttgcaaaaa attgtcgtaa attaaccgct
      841 tgctaagata gaatggctca tatccagtta gataaaaagg agataaaaat gtctgaagta
      901 tttcatttag gtttaaccaa agccatgctc aaaggtgcaa aaattgcaat cgttccgggc
      961 gatccggcta gaagtgaacg tattgccaaa aaaatggaca acccagagtt tttagcctca
     1021 acccgtgaat ttacctcttg gttaggttat ttagatggcg aaccggtggt ggtttgttca
     1081 accggtattg gcggaccgtc ggtgtcgatt tgtgtggaag agttagcaca gttaggtgtt
     1141 cgcacattct tacgcattgg cacaacaggt gcaattcaag agcatattaa tgtaggcgat
     1201 attttaatta ccaccggagc ggtgcgttta gatggtgcga gccaacattt tgcaccaatg
     1261 gaatatcctg cagtagcgaa ttttgaatgt actaatgctc tttatgcagc agcagtggaa
     1321 tcaggcgtta caccttatgt ggggattaca gcttcatcag acactttcta cccggggcaa
     1381 gaacgttacg acactttcac cggcaagatc tatcgtcatt tccaaggttc attaaaacag
     1441 tggcaagatc tcaatgttat gaattttgaa atggaatccg ccactctctt tacgatgtgt
     1501 tcggcattag gcttgcgagc aggtatggtt gctggtgtaa ttgtaaaccg cactcaacaa
     1561 gagattccga atgaagcaac cattcacgac accgaacata aagccgtttc ggtagtagtg
     1621 gaagcggcaa gaaaattaat taaaggctaa tctttaaatt taaaagcaaa aaaggtaaat
     1681 tgtctttgtt acaatttacc ttttttcttt ttagggagct ttctatgaaa aaatggttga
     1741 tgttaattac attaattttc ggcattaccg cttgtttttc cagtttagaa tttgatgaaa
     1801 gtaaacaaga aaaaatcaat tcattcttga ttgttggtaa taaattatat gtggtgggtg
     1861 aactgcacga ttatgaattt gagcatcagc aagttgcgga actgaataat tttctcaaaa
     1921 gcctaattgc taataaaatc aaatctgttg aggcaaactt cgaggttaag gaatccaaaa
     1981 aagtggaagg tagttataga attattttag atgggaaatc acttacagaa agtgaaagaa
     2041 gtacggtgat ggtttaattc agctcaaaat ccatctatta cttatcaggc ggaagggaac
     2101 ttggtgaaat tagccaatag agaagagctt ttgcaaaaat tccgatttaa acaagcgctt
     2161 gaggcgaatg tgcgttatta caaaatgaaa agtggtcttc aaaatacggc tgaaggagcg
     2221 ttaagtattg taatgttgcc tgttgctgta gtagctgttt taccattcta tatgttttgg
     2281 gttggtgctt gtgccactta cggatgttaa ataacttttt atgtattctc tatacctgaa
     2341 aattttatcg gaatgcgatt ggtgttgtga tccaaaaaca ctttctacct accagcaaga
     2401 atggcttctg cacgaagggt cacttaccca aaaattgtat gatgtcgcaa ccaatttcaa
     2461 cgtggaagta gtacaagaaa agtggattgc aaaaaacagt gaaaaaacga ccgcttgtaa
     2521 tgaagatgtt tggtcgcgag aagtgttact gaaagatggt gaaaaaaatt ggatttttgc
     2581 ccaaactctt gtgccaagat caacaatcga aaatatcgct caaaacgtgt tggaattggg
     2641 caatcagccg attggtttat ggctattttc tcaaaatcct actcgcacca aattagaatg
     2701 gacacaaaca gagaacggtt tattcgctcg gcgtggggtg tatgaaatta gagggtattc
     2761 tctggaaatt cgagagcttt ttttagaaac ctttccttat ttataaaaaa atcggttggt
     2821 aatgacacca accgattttc atcttatttt gccaagaact gataaattgc agccatatcc
     2881 acttcgctca agcctgaatc attggcttga ttgtaggttt tagtggcttg ctcaataagc
     2941 gggtaagatt tgcctaattt cgcaatttct tcgcttgcca aattaaaatc tttggtcata
     3001 tgtttcatca taaacgcagg cggaaattca ttagcttggt acatcggcac ttttgcttgg
     3061 aagatcgggc tgttcataaa cgagcctgaa atcatttcga ttactttctc tttcggaatg
     3121 ccatattggt cggcgaagtt taacgcctcg ccataggctt gaatgaagat gcccagtagc
     3181 gagttgatca tcaatttaat cccaccggct ttacccactt caccataata gaaagtggtg
     3241 gtactaaagg cagcgaaaag cggtttgagc aactcaacgg tttcttcttt accggcagcc
     3301 agtaccaata gtttacctgc ttctgccact ttgcttgaac cggaaaccgg agcttcaaca
     3361 aattctgcac cgtgttgggc tagtagagct tctaccgcct ggttttggct tggggaaatg
     3421 gtgctcatat tcaccactac tttgccgttt aattcagcca acacttcatc gcttaacacc
     3481 tgttgcacgg cggcatagtc tgcaatcatc aagaaaatca catcgtaggc tttcaccaat
     3541 tccaacacag aaggatataa tgtgccgcct gcttcaacta ccttttctgc ttttgctggg
     3601 tcgcggttgt aaacgcccac gttcactccg ctatttagca aatgttttgc catcggttcg
     3661 cccatttgcc ctaaaccaat ccaaccgact gcttgtgtat taatgttttt cattattttt
     3721 ctccttactg aataaagcaa attgattatt gcgattttcc ctcatcaagt caaatagaga
     3781 gaacttgaat atagcaatgg aaaagagtag cattttagca cttacttttt tgaacaatac
     3841 caatgaaacc aacaattctt ttatacgatt ccggaatggg cggattgacg atttacgatg
     3901 aaatccgaaa agtgttaccg cacgctcact atttatattg ctttgataac gcttttttcc
     3961 catattccga gaagtcggaa gcagttttaa ttgagcgagc ggtcaaaatt gtgcaaaaaa
     4021 ttgcagaaaa acaaccgctt gatatggttg ttgttgcttg taatacggca agcacagtgg
     4081 ttctgccggc attgcgtgag cattttaatt ttccgatagt aggaactgta ccggcaatta
     4141 aaccggcagc ggcaatttcc gaaactaaag tcatcggctt gctcgccact aaaggcacgg
     4201 ttgctcgccc ttatgttgat gaattgataa gaaaatatgc tcaggattgt acggtagaaa
     4261 aaattggcac aaccgatttg gttgaaattg ttgaagaaaa acaacgaagc ggtaaagtgg
     4321 atatgaaccg actacaaaaa gtggtcgagg cttggcaagg taagccggaa ttggatacgg
     4381 ttatactcgg ttgtacccat tttcccttag tcaaagctga attacagcaa ttattgcccg
     4441 atgtgaaata ttttgttgat ccgggtgtag gtattgccaa acgggtgcta agccttttgg
     4501 aagaacgcaa atttcaacaa aaagccgatt ttgaaaatca agcattctgc actaaacaaa
     4561 gttctgcatt taatatcaaa caagacgtta tgcagaattg gggatttaat aatctttcgg
     4621 tgattgatat ttaaacaaaa caatctgttt tgatgaaaaa aggttcagtt gagcaaaaac
     4681 tttaaaaaag ggcttgcact caattttaaa
//
LOCUS       DANLXO010000139         4699 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.141, whole genome shotgun sequence.
ACCESSION   DANLXO010000139 DANLXO010000000
VERSION     DANLXO010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.141"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..829
                     /locus_tag="PXD69_002451"
     CDS             <1..829
                     /locus_tag="PXD69_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL6284594.1"
                     /translation="STNQPIVIALAADLGYQTQVETLIKSLCYHHSHLKIYLFQKTFP
                     NEWFDIWCQKLALLSSEIIPVKVCVDFSKYKSLEHINETGFYRYLIPYLDEERVLYLD
                     SDIVVDDNLSEMYWLNFNGIPLYAVEDYVHNHIPAYLDLDLSPYFNSGVLLINNILWK
                     KYSVCDELVTINEKIVNLTYGDQDALNIYFKGGWGALPIEYNYQVDAILELVLRREQE
                     ELARKNGYLDVIPKIIHYTSKFKPWKKELHTMQISTRKKYWFYYHLEWNDILEQHQK"
     gene            complement(875..1162)
                     /locus_tag="PXD69_002452"
     CDS             complement(875..1162)
                     /locus_tag="PXD69_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL6284595.1"
                     /translation="MKNDKPIECEGCNTFDVGSILDNSETVATIQRTYESENEAKAAL
                     EKFTQKARDVESEPCEISSEITPIESGFELVAHFKFSCQAEVVIFQLGTRF"
     gene            1282..1695
                     /locus_tag="PXD69_002453"
     CDS             1282..1695
                     /locus_tag="PXD69_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PACE efflux transporter"
                     /protein_id="HDL6284596.1"
                     /translation="MTAWERVFHALLFECFAIIFTVILTSWLTSHRMVDLTAVIVMIS
                     VIAMVWNVIFNWGFDKVFTGERVQRGLGIRILHSFLFEGGLLVFTIPLVMYMLDIGWW
                     QAFVMDIGMTLFVLVYSVVFNWVYDHLRLRWVKSG"
     gene            1780..2772
                     /gene="mglB"
                     /locus_tag="PXD69_002454"
     CDS             1780..2772
                     /gene="mglB"
                     /locus_tag="PXD69_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL6284597.1"
                     /translation="MKRTILSAFALSVICGVNLSYAQSESRVGVTIYKYDDHFMTQMR
                     KDMQNEAKGFAGLKWFMNDAQNSQVKQLAQIETLLQHKMRVLAVNIVNANESKTIVEK
                     AKAYNVPVVFFNRTPSKQALESYEKAYFVSADPKEAGRIQGELIAKVWKSNPDFDLNK
                     DGKLQFVLLKGEPSDVSAERSQAVVESLNQQGVQAEEIYSDTARWRRTLARNKMNEWL
                     VENRAAEIEVVISNNDEMAIGALDALNAHEKRLPIFGIDALPETLALMKKGEIAGTVL
                     NDSSAQAKAVVKLVSNLAQGKPALKDTQWESHSSKTIYLPHIGIDKENLGQFLP"
     gene            complement(2978..3394)
                     /gene="tnpA"
                     /locus_tag="PXD69_002455"
     CDS             complement(2978..3394)
                     /gene="tnpA"
                     /locus_tag="PXD69_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDL6284598.1"
                     /translation="MKKETEIRRGRHVVFNLHVHLVFVTKYRREVFTQAILNDLHSIF
                     ATICADFEATLVEFDGEDDHVHLLVEYPPKVAISHLVNSLKGVSSRMIRKKNYPSIRK
                     KLWGNQLWSPSYFAGSCGGAPISIIRQYIEQQQTPD"
     gene            3441..4577
                     /locus_tag="PXD69_002456"
     CDS             3441..4577
                     /locus_tag="PXD69_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6284599.1"
                     /translation="MLLRKAFKFEIRPNGEQVRKMKQFCGCSRFVFNKALAWQNEQYE
                     QDNHHKFSYTKLANLLPQWKKELVWLKDCHSQVLQQSLKDLESAFKNFFQKRADLPKF
                     KKKGVKESFRFPQGCKIEQKNDRLYLPKIGWVRYRNSREIVGEVKNVTVSMKCGRFFV
                     SIQTEFKQEIPTHKGGEIGIDMGIARFATLSNGEFFEPLNAFKTHKGKLAKLQKQLKN
                     KVKFSKNWQKLKDKIGKLHHKIANCRKDFLHKISTQISKNHAMIYVEDLQVANMSKSA
                     KGTAEVHGKNVKQKSGLNRVILDQSWFEFRRQLDYKTQWLGGFLLAVPPQNTSRTCPC
                     CNYTAKENRQTQENFECVECGYTENADVVGAMNVLTRGQAIVQA"
BASE COUNT         1485 a          802 c         1010 g         1402 t
ORIGIN      
        1 atcaaccaac caaccaatag ttattgcatt agcagctgat ttaggctatc aaactcaagt
       61 tgaaacctta attaaatcgc tttgttatca tcattctcat cttaagattt atctatttca
      121 gaaaactttt cctaatgaat ggtttgatat ctggtgccaa aaattagcct tattatcgag
      181 tgaaattatt cctgtgaaag tctgtgtaga tttttcaaaa tataagagtt tagagcatat
      241 taatgaaacg ggtttttatc gttaccttat tccatatctg gacgaagaac gtgtactata
      301 tttagattca gatattgtgg ttgatgataa tttatcagaa atgtactggc ttaattttaa
      361 tggtatacct ttatatgcag tagaggatta tgttcataat catataccgg cttatcttga
      421 tttagacctc agcccttatt ttaattctgg ggtactatta attaataata tactttggaa
      481 gaagtattca gtatgtgatg agttggttac tatcaatgaa aaaattgtaa acttaactta
      541 tggcgatcaa gatgctctca atatttactt taaaggcggt tggggagcat tgccgataga
      601 gtataattat caagttgatg caattcttga actagtatta agaagagaac aagaggaact
      661 tgcgagaaaa aatggctatt tagatgtgat tccgaaaatt atccactata cgagtaaatt
      721 caaaccttgg aaaaaagaac tgcatacaat gcaaatatct acgcgtaaaa aatattggtt
      781 ttactatcat ttagagtgga acgatatttt ggaacaacat caaaaatagc tatcatacaa
      841 aagctgattc aagtgtttga atcagctttt tgtattagaa acgtgttcct aattgaaaaa
      901 taaccacttc tgcttggcag ctaaatttga agtgagcaac cagttcaaaa ccgctttcaa
      961 tcggggtgat ttcactgctg atttcacagg gttcagattc gacatcacgg gctttttgag
     1021 tgaatttttc aagtgccgct ttagcttcat tttcgctttc ataagtgcgc tgaatagtag
     1081 cgactgtttc gctgttatct aaaatagaac ctacatcaaa tgtgttacag ccttcgcatt
     1141 caatcggttt atcgtttttc attggctaat ccttctaaat tgatgaataa tgtaggtact
     1201 ttaaaactaa attgcgtaac ctgcaatcat cagtgaacga ttatttgatt tagttggtat
     1261 tttgcaaagt ttggaggaaa aatgaccgct tgggagcgtg tgtttcacgc gctgttattt
     1321 gaatgtttcg ctattatttt tacggttatc ttaacttctt ggctgacttc tcatcgtatg
     1381 gttgatttaa ccgcagtgat tgtgatgatt tcggtgattg caatggtgtg gaatgttatt
     1441 tttaactggg gttttgataa ggtgtttacc ggtgagcgag tgcaacgtgg tttaggcatt
     1501 cgtattttgc attcattcct ttttgagggc ggtttgctgg tttttactat cccattggta
     1561 atgtatatgc tcgatatcgg ctggtggcag gcgtttgtga tggatattgg aatgacctta
     1621 tttgtattag tttattcggt agtttttaat tgggtgtacg atcatttacg cctgaggtgg
     1681 gttaaatctg gctaaattgt gaactagatc acggtttcct tacacaaaat tcgctatgct
     1741 tgaattggtt catatttggc atagcaagag ggacattcta tgaagcgtac aatcttgagt
     1801 gcttttgcac tttctgttat ttgcggtgtg aatctaagtt acgcacaatc tgaaagcaga
     1861 gtgggggtaa cgatttacaa atatgatgac cattttatga ctcaaatgcg taaggatatg
     1921 caaaacgagg cgaaaggctt cgctgggttg aagtggttta tgaatgatgc acaaaattcc
     1981 caagtgaagc aattagcgca aattgaaacc ttacttcagc ataaaatgcg tgtgttggcg
     2041 gtgaatattg tgaatgcaaa tgagtcgaaa actattgtgg aaaaagcgaa ggcttataat
     2101 gtgccggttg tcttttttaa ccgcacaccg agtaaacaag cgttagaaag ttacgaaaag
     2161 gcgtactttg tgagcgctga tcctaaagag gccggtagaa tccaagggga attaattgcg
     2221 aaagtgtgga aatcaaaccc cgatttcgat ctaaataaag acgggaaatt gcaatttgta
     2281 ttgcttaagg gcgagccgag tgatgtgagc gctgagcgtt ctcaagctgt ggttgaatcg
     2341 cttaatcaac aaggtgttca ggcagaagaa atttacagtg acacggcgag atggcgtaga
     2401 acattggctc gcaataaaat gaatgagtgg ctggtggaaa accgtgcagc tgagattgaa
     2461 gttgtgattt caaacaatga tgaaatggca attggtgctt tagatgcgtt aaatgcacac
     2521 gagaaaagat tgccgatctt tggtattgat gccttgcctg agacgttagc attaatgaaa
     2581 aaaggggaaa tagccggcac ggtattaaat gatagctctg cacaagcgaa agcggtggtg
     2641 aaattggtat ctaatttggc acaaggtaag cctgcgctga aagatacgca gtgggaaagc
     2701 cattcctcta aaacgattta tcttccacat attggtattg ataaggaaaa tttagggcaa
     2761 tttttacctt aaatggagga gcggggcgtt ataaatacgc cccttattga tgataacaag
     2821 cggtcatttt tcagtaaaat cttgcaaatc ctttctcttt tcttccaaca gatttgaata
     2881 gagcgaatat tcaaatttta tctaatcgtg ccgtaaaacc acgtccttta gggcgtggat
     2941 ataaggtata aacggcaaag ccgtttcaaa tttctaacta atcaggtgtt tgttgttgct
     3001 cgatatattg gcgaataatc gatattggtg caccaccaca actaccagca aagtaagacg
     3061 gtgaccaaag ttgatttccc cataattttt tgcgaatgct cggatagttt ttctttctaa
     3121 tcattcggct cgaaacgcct tttaaactgt ttacaagatg agaaatagcg actttaggcg
     3181 gatattccac aagtagatga acgtgatcat cttcaccatc aaattccact aatgtggctt
     3241 caaaatcagc acaaatcgtt gcaaaaattg agtgtaagtc gttcaaaatt gcttgagtaa
     3301 aaacttccct gcgatattta gtcacgaaaa ctaaatgaac gtgtaagtta aaaacaacgt
     3361 ggcgaccacg tctaatctct gtttcttttt tcataggcca agtgtagaat aagcacaatt
     3421 tttgtattct aattcgtgca atgttactac gtaaagcctt taaatttgaa atcagaccaa
     3481 atggggaaca agttcgcaaa atgaagcagt tttgcggctg ttctcgcttt gtgtttaaca
     3541 aggcattggc gtggcaaaat gagcagtacg aacaagataa ccatcacaaa ttcagttata
     3601 ccaagctcgc caacttgctt ccgcaatgga aaaaagaatt ggtatggctt aaagattgcc
     3661 attcacaagt gcttcaacag tcgttaaaag accttgaaag tgcgtttaaa aacttctttc
     3721 aaaagcgtgc ggatttgccc aaattcaaga aaaaaggcgt aaaagagagt ttccgttttc
     3781 cgcaaggttg caaaatcgag cagaaaaacg accgcttgta tctgccgaaa atcggttggg
     3841 tgcgttatcg caacagtcgt gaaattgttg gggaagtaaa aaatgtcacc gtttcaatga
     3901 aatgcggacg cttttttgtg agcattcaaa cggaatttaa acaggaaatt cccacgcata
     3961 aaggcggaga aatcggcatt gatatgggca ttgctcgttt tgcaaccctt tccaatggag
     4021 aattttttga gccgttaaat gcgtttaaaa cccacaaagg aaaattggca aaactgcaaa
     4081 aacagctaaa aaataaagtg aagttcagta aaaactggca aaaactgaaa gataaaatcg
     4141 gcaagttaca tcacaaaatc gccaactgcc gaaaagattt cctgcataaa atctcaacgc
     4201 aaatcagcaa aaaccacgcg atgatctatg ttgaagattt gcaagtggcg aatatgtcca
     4261 aatcagccaa aggcacagcg gaagtacacg gcaaaaatgt gaaacagaaa tcaggcttaa
     4321 accgagtgat attagaccag tcttggtttg aatttagacg acaactggac tacaaaacgc
     4381 aatggttagg cggatttttg ctagcagttc ctccacaaaa taccagtcgt acttgccctt
     4441 gttgcaacta tacagcaaaa gaaaatcgcc aaacacagga aaattttgaa tgcgtagaat
     4501 gtggctatac ggaaaatgcc gatgtagtgg gagcaatgaa tgttcttaca cgtgggcaag
     4561 caatagtcca agcataataa atatcagggt aggacatacc cgaagcgtct atgaagtgaa
     4621 tctcaataga gatcagcagt agaaacccac cgagagtagc ccacagcttg ctgtgggagc
     4681 tagtaggaat cccctgcct
//
LOCUS       DANLXO010000140         4430 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.142, whole genome shotgun sequence.
ACCESSION   DANLXO010000140 DANLXO010000000
VERSION     DANLXO010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4430
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.142"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(241..1008)
                     /locus_tag="PXD69_002457"
     CDS             complement(241..1008)
                     /locus_tag="PXD69_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL6284600.1"
                     /translation="MSKIIKIGKVANNSDAIDAISTQPRHSVIVGTIKRLQTDRIDLL
                     YQHRVDPNVPIEEVAGAIKDLMKQGKVLNWGLSEAGEKTIRKAHAIQPLTAVQSEYSL
                     FFRGREKDVILVCEELGIGFVPWSPLAMGALAGYVDENSRFEADPSKDLRGIIPRFTP
                     EAMQQNVKLIQLVQKWAKRKLCTPAQLSLAWLMAQKAFIAPIPGTSKARHLLDNLGAD
                     DVKFTEEELAQFRQELEAIEIVGLRLPEAILNFSEAK"
     gene            1007..1327
                     /locus_tag="PXD69_002458"
     CDS             1007..1327
                     /locus_tag="PXD69_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284601.1"
                     /translation="MELKVIHKNLVDSAKIKLHAVYLVIFLFVSHFAMIFGMADPISA
                     GYQPTTPAMTHSMQMDAKQITEMHNQMMTGEITPEEMMKMHQEMNPNMNMPNTQGGHS
                     EHHK"
     gene            1509..1964
                     /locus_tag="PXD69_002459"
     CDS             1509..1964
                     /locus_tag="PXD69_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDL6284602.1"
                     /translation="MKLHKFTRSLLLLSLGITAFAQAQTLSMEVWKSPTCGCCNEWIS
                     YMQKNGFEVKVNETGNYDAHKRFNIKYEHASCHTAVIDGYVIEGHVPAEDIKRLLAEK
                     PDAIGLSAPGMPIGSPGMDGEAYGGRKDPYDVVLIKKNGESEVFKSYNQ"
     gene            1978..3525
                     /locus_tag="PXD69_002460"
                     /pseudo
     CDS             1978..3525
                     /locus_tag="PXD69_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340840.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
     gene            complement(3615..3770)
                     /locus_tag="PXD69_002461"
     CDS             complement(3615..3770)
                     /locus_tag="PXD69_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL6284603.1"
                     /translation="MGLNRAEMMYREGAYVIDPVFPATLGYAGAGVVVAVGDDAGEFQ
                     IGDKVSV"
     gene            3859..4038
                     /locus_tag="PXD69_002462"
     CDS             3859..4038
                     /locus_tag="PXD69_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284604.1"
                     /translation="MFLVNQLLAITIATSAVLTNAQLAILAVAFWIAILPCARLATAV
                     GVWVFDDVVHNNSPN"
     gene            4087..>4430
                     /locus_tag="PXD69_002463"
     CDS             4087..>4430
                     /locus_tag="PXD69_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284605.1"
                     /translation="MPFKTVTFAQATTNDGQSLLAVNDLFIGPKSHTSAQYILQWNGA
                     EEVQSSSGIIVSTGLGSTGWFQSILAGAMAITGEASHPLLQGFSWSDRKLQFSVREPF
                     PSRTTGVALTFGT"
BASE COUNT         1359 a          916 c          891 g         1264 t
ORIGIN      
        1 tttgtccata aattcattga gttgattatg ccatttttac acttattgac tatagcgttt
       61 tgcctaatca tctgtctgat tccagtttta cccttttccc aatatctttc aatttcgata
      121 aatcttccac taatcttgct acatattcaa gaaaaagtgc gatcgttttt caaaggattt
      181 tatgaaaacg accgctgtaa gaaagaattt ttatttacga ctttttcagg tatctgaaaa
      241 ctatttcgct tctgaaaaat tcaaaattgc ttcaggcaaa cgcaagccga caatttcaat
      301 ggcttctaat tcttggcgga attgcgccaa ttcttcttcg gtaaatttca catcgtctgc
      361 gcctaaatta tccaacaaat gacgggcttt gctcgtccca ggaattggcg cgataaacgc
      421 tttctgtgcc attagccagg ccaaagaaag ctgtgcaggc gtacaaagtt tgcgttttgc
      481 ccatttttgc acaagctgga ttaacttcac attttgttgc atcgcttcgg gtgtaaagcg
      541 tgggataata ccacgcaaat ctttgcttgg atcagcctca aaacggctgt tctcgtccac
      601 ataaccagcc aatgctccca ttgccagcgg cgaccaaggc acaaacccaa tccctaattc
      661 ttcacaaacg agaatgacat ctttttcacg accacggaaa aacaacgagt attcgctttg
      721 tacggcggtt aaaggctgaa tagcgtgtgc cttgcgaatg gttttctcgc ctgcttccga
      781 caagccccaa ttcaaaactt tgccttgttt cattaaatct ttaatagcgc cagccacctc
      841 ttcaatcggc acattgggat caacacggtg ttgatagagt aagtcaatac ggtcggtttg
      901 taagcgtttt atcgtaccga ctattactga atggcgtggt tgggtagata tcgcatcaat
      961 tgcatcacta ttattagcta cctttcctat ttttattatt ttactcatgg aattaaaagt
     1021 tattcataaa aatctcgtgg atagtgcaaa aattaaatta catgcggttt atcttgtgat
     1081 tttcttattt gtgagtcact ttgctatgat ctttggcatg gcagatccta tttcagcagg
     1141 ctatcaaccc actacaccag caatgactca ttcaatgcaa atggatgcta aacaaataac
     1201 agaaatgcac aaccaaatga tgacgggcga aataacgcct gaagaaatga tgaagatgca
     1261 tcaagaaatg aaccctaata tgaatatgcc gaatactcaa ggtggtcatt cagaacatca
     1321 taaataataa ttctgatcac attttaaaaa ataatagtgg atggtacgtt ggcatatctc
     1381 tactacaagc agtaggattt tgagaaaaat tttcaaatga tagaattttt tcagattact
     1441 tgaccttaac cctaggttaa gctttaaaat gatgtccatt caatctcaat aaaaaataag
     1501 gacatcttat gaaattacat aaattcaccc gctcattgtt gcttttaagt ttaggcataa
     1561 ccgcttttgc tcaagcacaa acactttcta tggaagtgtg gaaaagcccg acttgtggct
     1621 gttgtaatga atggatcagc tatatgcaga aaaacggttt tgaggttaaa gtcaacgaaa
     1681 caggcaatta tgatgctcat aagcgcttta acattaaata tgaacatgct tcttgccaca
     1741 cagccgtgat tgatggctat gtgattgaag gacatgtacc tgctgaggat atcaaacgtt
     1801 tactcgcaga aaaacccgat gcaataggct tgtctgcacc gggaatgcca attggttcac
     1861 caggtatgga cggtgaagca tacggcggac gcaaagatcc ttatgatgtt gttttgatta
     1921 agaaaaacgg tgaaagtgaa gtgtttaaat cctataacca ataggggggg ggaaagaatg
     1981 aaacgtcgag attttttacg ttatggaatt ggaattagct tagccagtag ctcgctttat
     2041 agcctcgcga atatgatgaa ccacgcacaa catggcaata tggcgatgat gcattcagta
     2101 cctactggcc taatgccaac tgaggcaatg ccttcaggtt tatcgcttaa tgggatatta
     2161 ccaaaacttg ctaatcaatc gactcaagct ggactgttca aagccacttt aaaagcagag
     2221 ccaattaaaa ttcgcctcgc agacaataaa gaaacggaat tttgggctta taacggacaa
     2281 ctaccagggc cacaaattga agtatttgaa ggagataccg tagaaattga atttatcaat
     2341 cacctaccac aaccctcaac agtacattgg cacggcttag atgtaccaaa tgaggcggat
     2401 ggtaacccga tggatatggt tgaaccgcaa gggaaaaaag tctatcgctt tacgctacct
     2461 caaggcagtg ctgggacata ttggtaccac cctcatccac atgaccatgt ttccgaacaa
     2521 gtctataaag gcttagcagg cactttcgtt gttaaagcga aaaatgatcc gcttgcacac
     2581 cttcctgaat aacattgggt gatttccgat ctgcgtttaa atgccgatgg caccattcca
     2641 gcaaacacga tgttagattg gataaacggt cgtgagggtg aatttgtgtt aatcaacggt
     2701 caatatcagc cccagattca agtgaaaacg aatgaacgaa tccgtctttg gaatgccact
     2761 agcgctcgtt attttcgttt aaacattcca ggggtgaaat ggattgtggt gggtaccgaa
     2821 ggtggtttac ttgaaaaacc tcgctcgcct gttgatgaac tgctacttac accagccgaa
     2881 cgcgttgaag tgattatggt gggtgaaacg caaggaacag tcaatttaca aagcggttat
     2941 tatgatcgcc gtaagatgat ggttcaagaa cagcctaaag atctcacttt agccacaatt
     3001 caggtgaaat cagaacctgt tcagttacct gaaagcttaa ggtccttgcc taactgggat
     3061 gagccaaagc aggttcgcca aattcgcttt agtgaaaaaa tgatgaacca tacgaatatg
     3121 ccaatgatga atcacggtac acatcacgct actacaacac taacggacaa ccctattcca
     3181 ccaatgatga atggtatgtt cttaatcaac ggtcaaacct ttgatatgaa ccgtattgat
     3241 tttgttacca aattgaatga agtggaacag tgggaaatct tcaatgaaag ccatatggat
     3301 catccattcc atttacacgg cactcaattt gaagtaattc aacatacgtt aaacggtaaa
     3361 acctttaagc cagaaggcag agcgttaaaa gatgtggtta atttacgccc ttatgaaaaa
     3421 gtgattattc gctttaagca aggacatact gggttgaaaa tgtaccattg ccatatttta
     3481 gaacatgaaa atctcggtat gatggggatg tttaaagtgg aatagtggta tctaactata
     3541 aaaatagagg gatttcgtca taaaaaatct gcaccttaat cagttggttt ttagtccaac
     3601 ttttggggtg cagatcagac gctcactttg tcgccgattt gaaattcgcc agcgtcatcg
     3661 cccactgcca cgaccacgcc tgcccctgca taacccaaag tcgcagggaa cacagggtca
     3721 atcacatacg ccccttcccg atacatcatc tcggcacggt ttagtcccaa tgcacggcac
     3781 ggtttttaaa cattttcatt atagttttcc ttatcaaaat gggatttggc aaacattggg
     3841 caaacctaag cccgcccaat gtttttagtt aatcaattac ttgcaatcac aatcgccaca
     3901 agtgcagttt tgacaaatgc acagctcgcc attttggcag ttgcattttg gattgcaatt
     3961 ttgccctgtg caagattggc aaccgcagtg ggcgtttggg tttttgatga tgtcgttcat
     4021 aacaattctc caaattaaag gttgattatc aaaacaaaaa ccgtttttaa acccattaat
     4081 aaaaaaatgc catttaaaac ggtcactttt gcacaagcaa caaccaatga tggtcaatcc
     4141 ttattagcgg ttaatgactt atttattggc cctaaaagcc acacttccgc acagtatatt
     4201 ttgcaatgga atggcgctga agaagtgcaa tcttcatcag gcattattgt atcaacagga
     4261 ttgggatcaa cggggtggtt tcaatctatt cttgctggtg cgatggcaat tacaggagaa
     4321 gcttcgcacc ctctattaca aggctttagc tggagtgatc gaaagctaca atttagtgta
     4381 agagagccat ttccaagtag aacaacaggt gttgcactga cttttggcac
//
LOCUS       DANLXO010000141         4411 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.143, whole genome shotgun sequence.
ACCESSION   DANLXO010000141 DANLXO010000000
VERSION     DANLXO010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4411
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.143"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            130..1449
                     /locus_tag="PXD69_002464"
     CDS             130..1449
                     /locus_tag="PXD69_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDL6284606.1"
                     /translation="MNHLLYSVEDKPPFGLSLLLASQHLLAALGGIIAVPLVLGNVLK
                     LSTADTIILVNAALLISGIVTIIQCRGIGPIGIRLPSVMGTSFTFVAAALAIGFSESG
                     IAGIMGASLVGSLVMIIGSFFMPYIRKLFPPVVTGTVIMMIGLSLIPVAVDWFAGGQR
                     TDPHYATPENLIMASFVLIIVVALVQWGKGIFSAAAIVIGMMIGYIVSLALGWVSFNG
                     VKEAQLFALPQPLHFGLEFPISGIIGMSIAYLVTIVESSGNFLALGNATKTEITGKHL
                     RGGVLCDGLGSAFAAIMSTTPFSSFSQNIGVISLTGVASRYVVAFTGALLVLAGLFPV
                     FGALIVSIPLPVLGGAGLMMFAMIIAAGIQMLDNIQRSKRNGLIIAISIGCGLAVTTR
                     PELLDKLPHFFKEVFGSGITVGSLLALILNLVLPEDKITKKENKSDE"
     gene            complement(1619..3562)
                     /gene="ftsH"
                     /locus_tag="PXD69_002465"
     CDS             complement(1619..3562)
                     /gene="ftsH"
                     /locus_tag="PXD69_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDL6284607.1"
                     /translation="MVKNILLWVVIAIVMMTAYEGFNSNFSGSSNTVPYSTFLSDIKE
                     NRLKGVDFKQNDDTILVTKNDGATYQTVMPMYDEYLMADLAKTNAVITGQPAERRGLL
                     SQILISWFPMLLLIGFYVFYMRQMQGGGGRGAMGFGKNKAKMLTADEVKTRFSDVAGC
                     DEAKEEVGEVVEFLRDPTKFQKLGGRIPKGILMVGPPGTGKTLLAKAIAGEARVPFFT
                     MAGSDFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRKRGGAGFSGGHDERE
                     QTLNQMLVEMDGFEGSEGVIIIAATNRADVLDDALTRPGRFDRQVTVDLPNVKGREQI
                     LKVHLKKVPLAEGVDPMQIARGTPGYSGAQLANLVNEAALFAARKNKRVVMMEDFEEA
                     RDKINMGPERRSNTMTEKEIINTAYHEAGHVIVGYLMPEHDPLNKVTIVPRGQALGFA
                     QFLPEGDRVSETFTKLESQLSTLFAGRIAEGLIFGEDKITTGASSDIHRATQIARAMV
                     TQWGFSKELGPIFYQNEDGMGAIKGVSEESQKLIDVEMRKIIDRNYQRAKQTLEENMD
                     ILHAMKDALLKYETLDSKQIDDLMARRPVGEPSGWTDTPTKDDNATPPSGEQAADVSS
                     TLEDNPNKDNNIGDSLADTKAEH"
     gene            complement(3683..4309)
                     /gene="rlmE"
                     /locus_tag="PXD69_002466"
     CDS             complement(3683..4309)
                     /gene="rlmE"
                     /locus_tag="PXD69_002466"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HDL6284608.1"
                     /translation="MGRKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQT
                     DRLFKPGMTVVDLGAAPGGWSQYVVTQIGSKGRVIACDILDMNPIVGVDFLQGDFREE
                     SVLNALLERVGEDKVNVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLATKGSF
                     VVKVFQGEGFDEYLREIRSLFSVVKVRKPEASRDRSREVYIVATGYKG"
BASE COUNT         1196 a         1009 c          817 g         1389 t
ORIGIN      
        1 accgcttgtc atttatcagt tagggaaaat aaaaaatcac tctcttatat aaaaacaatt
       61 acgcaaacga ttgcttatta aaaaaacttc agtataatgc cgacattttt taactctcga
      121 ggaatcacta tgaaccattt actttattct gtcgaagaca aaccgccttt cgggctgagc
      181 ttattgcttg cctcacaaca tttattagcc gctttaggtg gcattatcgc tgtaccttta
      241 gtgctaggga atgtactcaa actctctact gcggatacta taatcttagt taatgctgca
      301 cttttaattt caggcatcgt cactattatt caatgtcgag gtattggccc aatcgggatt
      361 agactaccga gtgtaatggg aactagcttt acgtttgttg cagcagcatt agcgattggt
      421 ttcagtgaaa gtggcattgc cggcattatg ggagcctctt tagttggctc tctagtgatg
      481 attatcggca gtttttttat gccttatatc cgtaagcttt ttccacccgt ggtaacaggt
      541 actgtcataa tgatgattgg cctaagttta attcctgttg cagtagactg gtttgctggt
      601 ggtcagcgta ctgatccaca ctatgcaacc ccagaaaatc ttataatggc tagttttgta
      661 ttaattattg tcgttgcttt agtacaatgg gggaaaggta ttttttcagc tgctgctatt
      721 gtgattggta tgatgatagg ttatatcgtt tcgctagctc tgggttgggt aagttttaat
      781 ggcgtgaaag aagcacaact ttttgcgtta ccacaacctc tacattttgg cttagaattt
      841 ccaatctccg gtatcatcgg aatgtcaatt gcttatttag ttaccattgt agaatctagc
      901 ggaaatttct tagcactagg caatgcaact aaaactgaaa ttaccggaaa acacttacgt
      961 ggaggtgtat tatgtgatgg tttaggctca gcatttgcgg caattatgtc cacaactccc
     1021 ttttcttctt tctcacaaaa tattggggtc atttcattaa ccggtgtagc cagtcgctat
     1081 gttgtagcat ttacaggcgc attacttgta ctagccggtt tatttcctgt atttggagca
     1141 ttaatcgtgt ctatcccgtt acctgtgctt ggcggtgcag gcttaatgat gtttgccatg
     1201 attatcgcag ccggtatcca aatgttagat aatattcaac gtagcaaacg aaacggttta
     1261 attattgcta tctctatcgg ttgtgggctg gccgtaacaa ctcgacctga gctattggat
     1321 aagcttccac acttctttaa agaagttttt ggctcaggta ttacggtcgg ctccttatta
     1381 gcacttattt tgaatttagt tttacctgaa gataaaataa ccaagaaaga aaataagagt
     1441 gatgaataaa tcaccctaaa aaaacaagga cagctcacaa tacaactttg atgctgtcct
     1501 ttattcccat agagagcata tttaaattta ggttaataaa aaaatctgca ctctatattg
     1561 gtgtttacct ttagagtaca gatttcttct tattctaact ttctagcaaa caattagatt
     1621 aatgttccgc tttggtatcg gctaacgaat ccccaatgtt attatcttta tttggattat
     1681 cctctaaagt tgaacttaca tccgctgcct gttcaccact tggtggagtg gcgttatcgt
     1741 ctttagttgg ggtatctgtc caacctgatg gttcacccac cggacggcgt gccattaaat
     1801 catcaatttg cttgctgtct aaggtttcgt atttcaataa ggcatctttc attgcgtgta
     1861 agatgtccat attttcttcc aaagtttgct tcgctcgttg atagttgcgg tcaatgatct
     1921 tacgcatttc cacatcaatc aatttttgcg actcttccga tacgccctta attgcaccca
     1981 ttccatcttc attttgatag aaaatcgggc ctaattcttt tgagaagccc cattgagtaa
     2041 ccattgctcg tgcaatttgg gttgctcgat gaatatcaga ggaagcccct gtggtaattt
     2101 tatcttcacc aaaaatcaag ccctcagcaa ttcgccctgc aaatagggtg gaaagttggc
     2161 tttccaattt ggtaaatgtt tcgcttacac ggtcaccttc cggtaagaat tgagcaaaac
     2221 ctaacgcctg accacgaggc acaattgtca ctttattcag cggatcgtgt tccggcatta
     2281 aatagccaac aataacgtgt ccagcttcgt ggtaagcagt attgatgatc tctttttccg
     2341 tcattgtatt tgaacggcgt tccggcccca tattgatttt gtcacgggct tcttcgaaat
     2401 cttccatcat taccacacgt ttattcttac gggcagcaaa taaggcagct tcgttcacca
     2461 agtttgctaa ttgagcacca gagtaacccg gcgtaccacg agcaatttgc atcgggtcaa
     2521 ctccctctgc aagcggtact tttttcaagt gaactttcaa aatttgctca cgccctttca
     2581 cgttcggcaa atcgaccgtg acttggcggt cgaaacgccc cggacgagtt aaggcatcat
     2641 ctaacacatc ggcacggttg gttgcagcga tgataatcac accttcagag ccttcaaagc
     2701 cgtccatctc aactaacatt tggttgaggg tttgttcacg ctcatcgtgt ccaccgctga
     2761 aacctgcacc accacgttta cgccctaccg catcaatttc atcaataaaa ataatacaag
     2821 gggcattttt cttggcttgg tcgaataaat cacgcacccg tgaagcaccc acacctacaa
     2881 acatttccac gaagtcggaa cctgccattg taaagaatgg cactcgtgct tcacctgcaa
     2941 tcgctttcgc caataaggtt ttacccgtac ccggagggcc taccatcaag atcccttttg
     3001 gaatgcgccc acctaatttt tgaaatttag ttgggtcacg caaaaactca acaacttcgc
     3061 ctacttcttc tttggcttca tcacagccgg ctacatcaga aaatctggtc ttaacttcgt
     3121 ctgcggtcaa cattttggct ttatttttcc caaagcccat tgcaccacgt cctccgccac
     3181 cttgcatttg tcgcatataa aacacataga aaccgattaa cagcaacatt gggaaccaag
     3241 aaatcaaaat ttgcgagagc aagccacgac gctcagcagg ctgaccggta atcactgcat
     3301 tggtttttgc taaatctgcc attaagtact catcatacat cggcattacg gtttggtagg
     3361 ttgcaccatc atttttcgtc accaaaatgg tgtcatcatt ctgtttgaaa tcgacccctt
     3421 ttaaacgatt ttctttaata tcgcttaaaa aagtcgaata tggcactgta tttgagctac
     3481 cactgaaatt agaattaaaa ccttcatagg ctgtcatcat cacaatggca atcaccaccc
     3541 aaagtaaaat atttttaacc atatcgttca aggttaatcc cctatctgct gaataaaaaa
     3601 ctgttcaaga ttactataaa agcggtcgaa ttttccaatt tttttgcaaa atgttaataa
     3661 aaaatgaccg cttgcttgtt ttctagcctt tataacctgt cgctacaata taaacttctc
     3721 gagaccgatc tcgagacgcc tccggttttc tgacttttac cacactaaag agcgagcgga
     3781 tttctcgaag gtattcatca aatccttcgc cttggaatac cttaaccaca aaactgcctt
     3841 tggttgctaa tacttggcga cacatatcca atgccaattc cactaaatac attgcacgag
     3901 gaatatcaac cgacggcata ccgctgaaat tgggagccat atccgacatc accacattca
     3961 ctttgtcttc gcctactcgc tcaagtaacg cattcagcac cgattcttca cggaagtcgc
     4021 cttgtaagaa atccacgcct acaatcgggt tcatatctaa aatatcacaa gcgattactc
     4081 tgcccttact gccgatttgc gtcaccacat attgcgacca accgcccggt gcggcaccga
     4141 gatccaccac cgtcattccc ggtttgaata aacggtcggt ttgttgaatt tcatctaact
     4201 taaaatacgc ccgtgaacgc aatttttgtt tatgtgcttt ttgcacaaat tgatctttaa
     4261 aatgttctgc aagccaacgt gatgaactcg cacttcgttt tctacccatt tgttcttcta
     4321 tcttaattaa ttcaacgatt tataataagg gttaaattag caaattcaag agatgttcta
     4381 aaatttagct cggcttatta tgcttaatta a
//
LOCUS       DANLXO010000142         4398 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.144, whole genome shotgun sequence.
ACCESSION   DANLXO010000142 DANLXO010000000
VERSION     DANLXO010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4398
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.144"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..249)
                     /locus_tag="PXD69_002467"
     CDS             complement(<1..249)
                     /locus_tag="PXD69_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284609.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLE"
     gene            399..626
                     /locus_tag="PXD69_002468"
                     /pseudo
     CDS             399..626
                     /locus_tag="PXD69_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
     gene            651..1046
                     /locus_tag="PXD69_002469"
     CDS             651..1046
                     /locus_tag="PXD69_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284610.1"
                     /translation="MKIHTQIRKEILSLLEAKLTDIEHFYNGQPNFIDIDEQQLAISV
                     YLDEINRQELTLCDEQWTAQLNITIYLKSVDEAEDELDEWAEKIREVVETYSAFEHLE
                     GISLSQYQYEQDQNQRTWHSATLIFDVEY"
     gene            1078..1719
                     /locus_tag="PXD69_002470"
     CDS             1078..1719
                     /locus_tag="PXD69_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284611.1"
                     /translation="MAKTTKVQGTKFRIGIGREAQKAITAITLATATLTIATSGYKKG
                     DAIEITGCGQLDGIYPVLSVTGDQVKLCEEVNWTGKDLPANYTKAKAALVQYSDQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPSTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            1802..2203
                     /locus_tag="PXD69_002471"
     CDS             1802..2203
                     /locus_tag="PXD69_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284612.1"
                     /translation="MTLREKLLANKPKLQSIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGALLFNPLNIDDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            2248..2478
                     /locus_tag="PXD69_002472"
     CDS             2248..2478
                     /locus_tag="PXD69_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL6284613.1"
                     /translation="MPERHFAEYQLFYQEQPFGLWREDYRAAQLAHLTAMINRDPKGK
                     APELSEFMPFFNRADEVEANEDDGVADYLAKR"
     gene            2546..2812
                     /locus_tag="PXD69_002473"
     CDS             2546..2812
                     /locus_tag="PXD69_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL6284614.1"
                     /translation="MATINDAFSFRTNTEIKNTAFDVIKNYGMTPSQVFNMFLTEIAK
                     TKTIPLSLNYQPNLETKLAMQEAKSGKNEVYASLEAFHKAMLAE"
     gene            2816..3085
                     /locus_tag="PXD69_002474"
     CDS             2816..3085
                     /locus_tag="PXD69_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL6284615.1"
                     /translation="MLQISPTNAYKRDFKKIAAELVGSSEYVEVMYCLINQLPLAEKY
                     RDHPLQGEWQGFRDCHIKPDLVLIYAVEDNLLRLVRLGSHAELFG"
     gene            3160..3423
                     /locus_tag="PXD69_002475"
     CDS             3160..3423
                     /locus_tag="PXD69_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284616.1"
                     /translation="MKNVLLFIVHFFLIAMLSIIPILIILGAIERDPYYTAWIFLSVF
                     LGIGALLYFATIVSKLINKGKTQTLEEKRYAEYWNNVKVNIPK"
     gene            3483..4193
                     /locus_tag="PXD69_002476"
     CDS             3483..4193
                     /locus_tag="PXD69_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HDL6284617.1"
                     /translation="MSGLGKLTVTLELENAKFQSAMTKSDYEAQKFAKNFIQNMDRAR
                     NHAKEFADRSTQYLKNIEQAAKNLNKNSEFSFLSTIGGHYQSMSSGILSAAKAYTDIQ
                     NKMKLVSGSSAEAAKRLTDVFDIATKTSQSTEAVSGVYQTFAQNAQSLGLAQKDVAEL
                     TKTVSQAVAASGASSSAASNALTQFGQSLLMGKMKAQEFNSLITQTPTIIQAMAKGLG
                     MTMAEFKAAVYRAKSLLG"
     gene            4171..4398
                     /locus_tag="PXD69_002477"
                     /pseudo
     CDS             4171..4398
                     /locus_tag="PXD69_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484718.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
BASE COUNT         1462 a          876 c          868 g         1192 t
ORIGIN      
        1 ctctaatgtg tgccattctt ttgcaagtgc agcccaaact ttcccaagtt cagccatttt
       61 ttcaatccta tttcgcaaaa aagggactgt ctccaacaac agaaagcaac gcctgaaatc
      121 cgatacatcg tgtgggtagc cttctatttt tggtcttatt ccgtaaccaa ggtaaaaagc
      181 cattgtttta ctgcttaccc ctgtctctcc attggcaagc caccaagcga ttttgtcttc
      241 tatgtgcatt tttcctccaa aaattaaccg cttgcggaac aagttctaca agcggttgtc
      301 aagtgttcat ttgttcaatg aacagttcat tgtgaataac aaaaccgctt gaattacaag
      361 cggtctattt tgttgcgtaa atttactgtt agcgttgagc cataaccgac tacgaccgct
      421 ggcccgaaga tattgacggc gagggggacg gcttctcgct tgcctccaaa cggacgacca
      481 cttttatgtc agccggaatg actttagtgg agagttcgcc tggtaaagat attgtcgatc
      541 tcaaacatat cccgaaaagt agccacgaag ccccaccgac taccggtatt ttaagcctct
      601 acaatcgagg cgaccgcaga cgctttagcg aaacagttga taggtaagct atgaaaatcc
      661 atacccaaat ccgaaaagaa atcctttcat tattagaggc aaaattaacg gacatcgagc
      721 atttttataa cgggcaaccg aatttcattg atattgacga acagcaactt gccatctctg
      781 tttatcttga tgagattaac cgtcaggagc ttaccttatg cgatgaacag tggacagctc
      841 aacttaacat cacgatttat ctaaaatcag ttgatgaggc agaagatgaa ttagatgagt
      901 gggccgaaaa aatccgtgaa gtggttgaaa catattctgc gtttgaacat ttagagggca
      961 tcagcctttc tcaatatcaa tacgaacaag atcaaaatca aagaacttgg cactcagcca
     1021 cattgatttt tgatgttgaa tactaacaag caaataatcc ttataggaga atctacaatg
     1081 gcaaaaacaa caaaagtcca aggcacaaaa tttagaattg gcattggacg tgaagcccaa
     1141 aaggcaatta cggctatcac tttagctaca gcaacgctta ctattgccac atcaggctat
     1201 aaaaaaggcg atgcaatcga aattaccggt tgtggtcagt tagacggcat ttatcctgta
     1261 ttatctgtaa caggcgatca agtcaaattg tgcgaagaag taaactggac gggtaaagat
     1321 ttaccggcta attacaccaa agccaaagca gctttagtac aatactcaga ccaattctgt
     1381 gcggtaaaaa acattgaaaa atctgatgat acgttaagta ccgaagatgt tacaacggtc
     1441 tgctcggaag gtacagaaac cgaacccgga gaaattgaat ttggctcaat taaactgagc
     1501 ttttttcaca agccaagtac ggaaatgcaa actcgcttac gcaaattgtt ttatgacaaa
     1561 tccacctttg cgtacaaatt agaattacct gataaccacg gcacaaccta tggcgaaggt
     1621 ttcattgagg cgggtaacgg ctttagtggc gaagttaaag gcaaatatga aggctcggta
     1681 tcaattaaac caagcaaacg tgattatttg ctagtgtaat tacaaaatat tgctccaaat
     1741 cgaccgcttg taatattgca agcggtcttt tttatcctaa attttacaaa aggaatcgac
     1801 aatgacactc cgtgaaaaac tcctcgccaa caaaccaaaa ttacaatcta tcgaaatcaa
     1861 cggtgagacc tactacctgc gtgaagccac tgttggcgat atgaataagc agatttttga
     1921 aacccgaagc tggctcattc aacaagctga acaagaaaat gttgaattac cggcagaaga
     1981 tgatgaaacc tttgacgaag ctctcaaccg ttttggcgaa aaataccgcc ttgctcaatc
     2041 ggttgcctac cgtttatgtg acgaaaacgg tgcattactg tttaacccac ttaacattga
     2101 cgatctcaat gcgattgccg aattagacag taaagtgatt atcgacttta accaagccgt
     2161 gtccgcccca aaagactcag cgagcgaaga aagttccaaa taaccctttc gctcgcactg
     2221 ggtaaaaccc ttgaagaaat cgaacaaatg cctgaacgcc actttgccga atatcagctt
     2281 ttttatcaag agcaaccttt tgggctttgg cgtgaggact atcgtgctgc tcaacttgcc
     2341 cacttaaccg caatgatcaa ccgtgaccca aaaggcaaag cccctgaact ctcggaattt
     2401 atgccgtttt ttaatcgggc tgatgaagta gaagcaaatg aagatgatgg cgttgcggat
     2461 tatttggcga aaaggtaaat ctcttgtatt tcattgtaat tctgtctata attggtgtaa
     2521 tacatagaaa tacaggagag ataaaatggc gactatcaat gatgctttca gttttagaac
     2581 aaataccgaa ataaaaaata ccgcatttga tgtaattaaa aactatggaa tgacaccctc
     2641 tcaggtgttt aatatgtttt taaccgagat tgcaaaaacg aaaactattc cgttaagttt
     2701 gaattatcaa cccaatcttg aaacaaaatt ggcaatgcaa gaagcaaaat caggtaaaaa
     2761 tgaagtttat gcctcacttg aagcatttca taaagcaatg ttagcggagt aaataatgct
     2821 acaaatttcg ccgacaaacg catataaaag agactttaaa aagattgcag ccgaattagt
     2881 cggtagttcg gaatatgtgg aagtaatgta ttgcctaata aaccaattac cattggcgga
     2941 aaaatataga gatcacccac tacaaggtga atggcaaggc tttagagatt gccatattaa
     3001 gcctgattta gtgttgattt acgctgttga agataatctg ctccgccttg ttcgtttagg
     3061 atcgcacgct gaattatttg gataatttct gtaaaaacta accgcttgcg attttgtgct
     3121 gtgggcggta tagttggaat attaacaaag gagggaaaaa tgaaaaatgt acttctattt
     3181 atcgtacact ttttcttaat cgcaatgctc tcaattatcc caatattaat tattcttgga
     3241 gcaatcgaaa gagatcctta ctatactgcg tggattttcc ttagcgtatt tttaggcatt
     3301 ggagcattgt tatattttgc aaccattgtt tctaagttaa ttaacaaggg aaaaacacaa
     3361 acattagaag aaaaacgata tgcagaatat tggaataatg taaaagtcaa tattcccaaa
     3421 tagtctaact gataaatgac caaaagctcg ctttatgcgg gcttttttat tggagaaaaa
     3481 caatgagtgg cttaggaaaa ttaaccgtta ccttagagct tgaaaatgca aaatttcagt
     3541 ccgcaatgac gaaatctgat tatgaggcac aaaaatttgc caagaacttt atccaaaata
     3601 tggatagagc tagaaatcac gccaaagaat ttgccgatcg ctcaacccaa tatttaaaaa
     3661 acattgagca agcggcaaag aacctcaata aaaattctga attttcattt ttatcgacta
     3721 ttggtggaca ttatcaatca atgtctagtg gcatattgag tgcggcaaaa gcctatactg
     3781 atattcaaaa taaaatgaaa ttagtaagcg gtagttcagc agaggcagct aaacgattaa
     3841 ctgatgtgtt tgatattgcg actaaaacaa gccaaagtac agaggctgtt tcaggtgtct
     3901 atcaaacatt tgctcaaaat gcccaatctc tcggactggc tcaaaaagat gtagcagaat
     3961 taactaaaac ggtctctcaa gccgttgctg caagcggcgc aagcagttct gcagcaagta
     4021 atgccctaac ccaatttggt caatcacttt taatgggcaa aatgaaagcc caagaattta
     4081 actcgctcat tactcaaacc ccaaccatta ttcaagcaat ggcaaaaggt ttgggaatga
     4141 caatggcaga atttaaagca gcggtatacc gggcaaaatc tttacttgga taacattcaa
     4201 gggcaaggtt ttgagagagt ggatacaccc caaatcggcg atgtgatttt aatacaggtc
     4261 ggttctgatg tgccgaatca cgcagcgatt tatattggtg aacaaatggt aatccaccat
     4321 agcccgaacc gattatctaa gcgtgattta tatgacggtt attggttacg ccatacccac
     4381 agtatttggc ggcataaa
//
LOCUS       DANLXO010000143         4357 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.145, whole genome shotgun sequence.
ACCESSION   DANLXO010000143 DANLXO010000000
VERSION     DANLXO010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4357
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.145"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1137)
                     /gene="dnaJ"
                     /locus_tag="PXD69_002478"
     CDS             complement(<1..1137)
                     /gene="dnaJ"
                     /locus_tag="PXD69_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDL6284618.1"
                     /translation="MAKKDYYEVLGLSKGASEKDIKRAYKRLAAKHHPDKNQGSKESE
                     EKFKEITEAYDVLTDSEKKAMYDQYGHAAFEQGGAGAGGFGGFGGGGFGGFEDIFSEM
                     FGGGFGGGGRRQRVVRGDDLRYDIEITLEEAVKGCKKDIRIQTLAECDTCHGTGAEAG
                     SKVETCSHCHGSGRVRRQQGFFVTEAVCPSCHGTGKRIEKPCRSCHGDGRVQKAKNLS
                     VTIPAGVDTGNQLRLSREGAAGENGAPAGDLYVVIHVKEHDIFERDGSNLYCEVPISF
                     TLAALGGEIEVPTLDGKLKLKIPAETQTGKLFRVRGKGVTSPRGGYAGDLICKVVVET
                     PVNLTEEQKALLRQFEESLEGQGKHRPKHEGFFDGVKKFFDNLGK"
     gene            complement(1360..1662)
                     /locus_tag="PXD69_002479"
     CDS             complement(1360..1662)
                     /locus_tag="PXD69_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284619.1"
                     /translation="MLKLYPTTENVQPPFYKIYDHKSGETVIATETENSNTAILMDDF
                     VWFEQIPTTEALLADTWSVIENRSKQGLLKRAYTKDFEKHLADGKVEIYIAVNPHC"
     gene            complement(1804..3702)
                     /gene="dnaK"
                     /locus_tag="PXD69_002480"
     CDS             complement(1804..3702)
                     /gene="dnaK"
                     /locus_tag="PXD69_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005670448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDL6284620.1"
                     /translation="MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGARTTPSIIAYTD
                     KETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDAEVQRDIEIMPFEISKADNGDAWV
                     TVKGDKLAPPQISAEILKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIA
                     GLDVKRIINEPTAAALAYGLDSKKENQTIAVYDLGGGTFDISIIEIDNFDGEQTFEVR
                     ATNGDTHLGGEDFDNRVINYLVEEFQKEQGVDLRNDPMAMQRVKEAAEKAKIELSSAQ
                     ETEVNLPYITADATGPKHLNIKVTRAKLESLVEDLVNRSLEPLKTALADAGLSVGDIN
                     DVILVGGQTRMPLVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGSVTDVLLLD
                     VTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADN
                     KSLGQFNLEGINPAPRGMPQIEVTFDIDANGIINVSAKDKNTGKEQQIKIQASSGLSD
                     AEVEQMVRDAEANAEADKKFEELVQARNQADGIAHATRKQITEAGDALNADDKAKIEA
                     AISELETAAKGEDKAEIEAKIEALIKASEPLMQAAQAKAQGGEQPQQSQKDDGVVDAE
                     FEEVKDNK"
     gene            3961..4299
                     /locus_tag="PXD69_002481"
     CDS             3961..4299
                     /locus_tag="PXD69_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6284621.1"
                     /translation="MKLITTIIQPSKLDQVQDALSEIGIQGMTITEVKGFGRQYGHTE
                     QELSQMSRIDFRPKIKVEILVSNYQTDEVIDAILNASYSGQVGDGKIYVANIEQVIRT
                     RTGETDDEAV"
BASE COUNT         1095 a         1019 c          873 g         1370 t
ORIGIN      
        1 tttgcctaag ttatcaaaga atttcttcac accatcaaag aaaccttcgt gtttcggacg
       61 atgtttacct tgtccttcta aactctcttc aaattgtcgt aatagtgctt tctgttcttc
      121 ggttaaattc acaggcgttt cgaccaccac tttgcagatt aaatcccctg cgtagccacc
      181 acgagggctt gttacccctt tgcctcgtac acggaatagt ttaccggttt gagtttctgc
      241 cggaattttg agttttaatt tgccgtctaa agttggcact tcaatttcac cgcctaaagc
      301 tgcaagggta aagctaatcg gcacttcaca gtataaattc gaaccgtcac gctcaaaaat
      361 atcgtgttct ttaacgtgaa tcaccacata taaatcgcct gccggtgcgc cattttcgcc
      421 tgcagctccc tctctcgata agcgaagttg attaccggta tccacacctg ccggaatggt
      481 aacagagagg tttttcgctt tctgtacacg tccatcgccg tggcaagaac ggcacggttt
      541 ttcaatgcgt ttacctgtac cgtgacaact tggacaaact gcctcagtca caaagaaacc
      601 ttgctgacgg cgaactctgc cggagccgtg acaatgcgaa caggtttcca ctttgctccc
      661 tgcttccgcc cctgtaccat gacaagtatc acattcagct aaggtttgaa tgcgaatatc
      721 ttttttacag cctttcacag cttcttcaag ggtgatctcg atgtcgtaac gtaaatcatc
      781 gccacgtacc acacgttggc gacgtccacc gccaccaaag ccaccgccaa acatttcgct
      841 gaagatgtct tcaaaaccac cgaaaccacc gccgccaaag ccaccgaatc cgcctgcacc
      901 ggcaccgcct tgttcaaagg cggcgtgacc gtattggtcg tacatcgctt ttttctcgct
      961 gtcggtcagc acgtcatagg cttcggtaat ctctttaaat ttctcttccg actctttact
     1021 gccttggttt ttatccgggt gatgctttgc cgccaaacgt ttatatgctc gtttgatgtc
     1081 tttctcgctt gcccctttag acagtccaag gacttcgtaa taatctttct ttgccattgt
     1141 tgttccgttt gtaaattttt ctgtgttttt gaccgcttgc cctcgcccct tgtgggagag
     1201 gggtaggatg gttaattccc cctctctctg aaaaatattt ctgaacgaaa tatttttcgg
     1261 tctctctccc acaaggggag agagttttat ataattaaat gggatctagc caagatggct
     1321 caagatgaca caagcgtgga cgcttgcgct atcaaaagcc taacaatgcg gattcaccgc
     1381 aatataaatt tctactttgc cgtctgctaa atgtttttca aaatctttgg tgtaagctcg
     1441 tttgagcaaa ccttgtttgg aacggttttc aatcacagac caagtgtctg ccaaaagagc
     1501 ttcggtagtt ggaatttgct caaaccaaac aaaatcgtcc attaaaatcg cggtattgct
     1561 gttttccgtt tctgtggcaa tgaccgtttc gccactttta tgatcgtata ttttataaaa
     1621 cggtggctgt acattttccg ttgtagggta gagttttagc atttgtaaaa tttcctttga
     1681 aaagcaccgc ttgcacagcc ccaaaggggc tgaattatgt gtaacctagc acggctcgtg
     1741 ctaggtggta tatatctaca caaaaggggc gaaagatatt tcgcccctac aagttacgca
     1801 agattattta ttatctttca cttcttcaaa ttccgcatcg accacgccgt catctttttg
     1861 agattgttgt ggttgctcgc cgccttgtgc ttttgcttgt gctgcttgca ttaacggttc
     1921 tgaagctttg attaacgctt cgattttcgc ttcgatctcg gctttatctt cgcctttagc
     1981 tgcggtttct aactcagaaa tagccgcttc gatcttcgct ttatcgtctg cgtttaacgc
     2041 atcgcctgct tcggtaattt gcttacgggt tgcgtgagca ataccgtctg cttggttacg
     2101 agcttgaact aactcttcaa attttttgtc tgcttccgca ttcgcttctg catcacgcac
     2161 catttgttca acttcagcat cgcttaagcc tgaagatgct tgaattttga tttgttgctc
     2221 tttgccagtg tttttatctt ttgcagagac attgataata ccgttagcat caatatcaaa
     2281 ggttacttca atttgtggca taccgcgtgg agcagggtta ataccttcaa ggttgaattg
     2341 acctaaagat ttattatccg ctgcacgttt acgctcacct tgtaacacgt ggatagttac
     2401 cgcagattgg ttatcttccg ctgttgagaa cacttgtgat ttcttggttg gaatcgtagt
     2461 gtttttctca attaaggtag tcattacacc acccattgtt tcgataccaa gtgaaagcgg
     2521 agtaacgtct aataacaata cgtctgttac cgaaccactt aacacaccgc cttgaaccgc
     2581 cgcaccgatt gccacagctt cgtccgggtt aacgtcttta cgcggttctt tgccaaagaa
     2641 gtctgccact tttttctgta ctaacggcat acgggtttga ccaccgacta aaatcacatc
     2701 gttgatgtcg cctactgata aaccggcatc agctaaagcg gtttttaacg gctctaacga
     2761 acggtttact aaatcttcaa ctaaagattc caatttcgca cgggttactt taatgtttaa
     2821 gtgtttcggg ccggttgcat ctgccgtgat gtatggaagg ttcacttcag tttcttgtgc
     2881 agaagaaagt tcgattttcg ctttttccgc tgcttctttc acacgttgca ttgccattgg
     2941 gtcgttgcgt aaatcaacgc cttgttcttt ttggaattct tccactaagt agttgattac
     3001 acggttatcg aagtcttcac cacctaggtg agtatcgccg ttggttgcac gcacttcaaa
     3061 agtttgctcg ccgtcaaagt tatcaatttc gataatcgaa atatcgaatg taccaccacc
     3121 taagtcgtaa acagcaatcg tttggttctc tttcttagaa tctaaaccat aagcaagcgc
     3181 tgccgctgtt ggttcgttga tgatacgttt tacatctaaa cctgcaatac gaccggcatc
     3241 tttagttgcc tgacgttgtg catcgttaaa gtatgcaggc acagtaataa ccgcttcggt
     3301 taccggttcg cccaagaaat cttctgcggt tttcttcatt tttttcaaga tttcagcaga
     3361 gatttgcggc ggtgctaatt tatcgccttt tacggttacc cacgcatcgc cgttatctgc
     3421 tttgctgatt tcaaacggca taatttcaat atcacgttgc acttcagcat cagtaaaacg
     3481 acggccgatt aaacgcttga ttgcaaataa agtatttttc gggttagtaa ttgcctgacg
     3541 ttttgccggc tgaccaacta aggtttcttt atcggtgtaa gcgatgatag atggcgttgt
     3601 tcttgcccct tccgcatttt caattacacg aggtttgtcg ccgtccatta ccgcaacaca
     3661 agaatttgtt gtacctaagt caataccaat gattttaccc atttttatga ttcctataat
     3721 aataaattca gtttgaataa gaaacgggat tgcatttccc gttcagacga aatcataaat
     3781 agggacgaaa atgcactgtt caagggcaaa aataaaaaaa ttgcaaaatt tttggaaaaa
     3841 gtaaccgctt gtatgtgggg gagatttggc agaatatttc acggagaaaa tacctcctac
     3901 cttgcatacc cctcaatagc tttttatact tacggcaact caaacagaga aggatataat
     3961 atgaaactga ttactaccat tatccaacct tcaaaattag accaagtgca agatgcactt
     4021 tcagaaatcg gtattcaagg aatgactatt accgaagtaa aaggctttgg acgccaatat
     4081 gggcataccg aacaagagct tagccaaatg agccgcattg actttcgtcc taaaattaag
     4141 gtggagatat tggtttctaa ttaccaaacc gatgaagtga tcgatgccat tctcaatgca
     4201 tcctattctg ggcaagtggg tgatggcaaa atttatgtag cgaatattga acaagttatc
     4261 cgcacccgta ccggcgaaac tgacgatgaa gcagtctagc cattgctagc agagaagctt
     4321 tttattatcg tgttttagag ttatattttc aacctta
//
LOCUS       DANLXO010000144         4304 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.146, whole genome shotgun sequence.
ACCESSION   DANLXO010000144 DANLXO010000000
VERSION     DANLXO010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.146"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            18..1052
                     /locus_tag="PXD69_002482"
     CDS             18..1052
                     /locus_tag="PXD69_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6284622.1"
                     /translation="MKLKKLSLALSTLLLGSAFANSALAEGRLTVYCSATNELCEQEV
                     QAFGKKYNVKVAFVRNGSGSTLAKIEAEKNNPQADVWYGGTLDPHSQAAEMGLLEPYK
                     SPNLEQIIEKFRDPAKLKGNYSSAVYMGILGYGVNLDRIKKLGIEKVPSTWEDLLDPR
                     LAGEIQIADPQSSGTAYTAIATFVQLLGEEKAFDYFRKLHKNISQYTKSGITPARNTA
                     RGETAIGIGFLHDYAIEKKNGANIEMTAPTDGTGYELGGVSILKGARNLDNAKLFVDW
                     SLSKEAQELSWQKGNAFQVLTNTTAESSPYALDPKNLNLINYDFEKYGSSEERKRLID
                     KWVNEVKLAK"
     gene            1120..3050
                     /locus_tag="PXD69_002483"
                     /pseudo
     CDS             1120..3050
                     /locus_tag="PXD69_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016534092.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
     gene            3148..4197
                     /gene="fbpC"
                     /locus_tag="PXD69_002484"
     CDS             3148..4197
                     /gene="fbpC"
                     /locus_tag="PXD69_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric ABC transporter ATP-binding protein"
                     /protein_id="HDL6284623.1"
                     /translation="MNNDFLVLKNVTKSFGKVTVIDNLNLSIPQGKMVTLLGPSGCGK
                     TTVLRLVAGLENPTSGQIFIDGEDVTQSSIQHRDICIVFQSYALFPHMSIGDNVGYGL
                     KMQGVPKEERLQRVKEALELVDLGGFEDRFVDQISGGQQQRVALARALILKPKVLLFD
                     EPLSNLDANLRRSMREKIRELQQRLNITSLYVTHDQSEAFAVSDEVIVMNKGKIMQKA
                     PAKELYLRPNSLFLANFMGESSIFEGTIAGNQININGYQFTLANAEQFELPDGEYLVG
                     IRPEAIHLAEQGNISQLCKIKNAVYMGNHWEIIAEWEGKDLLVNTKPENFYPHIKQAY
                     VHFIEQGVFLLKKEL"
BASE COUNT         1151 a          945 c          962 g         1246 t
ORIGIN      
        1 tcattaagga aataaaaatg aaattaaaaa aattatcttt agcactctcg actttattac
       61 tcggttcagc ctttgccaac tctgctttag cggaaggtcg tttaaccgtt tattgtagtg
      121 ccactaatga actttgtgag caagaagtgc aagcattcgg caaaaaatat aatgttaaag
      181 tagcatttgt gcgtaatggt tcaggcagta cattggcgaa aattgaagcg gagaaaaaca
      241 atcctcaagc tgatgtatgg tatggcggta ctttagatcc acattcacaa gctgcagaaa
      301 tgggtttact cgagccgtat aaatcaccga atctcgaaca aattatcgaa aaattccgtg
      361 atccggcaaa attaaaaggc aactactctt cggctgtgta tatggggatt ttaggttatg
      421 gtgtgaattt agaccgaatc aaaaaactcg gcattgaaaa agtgcctagc acttgggaag
      481 acttgctcga cccacgccta gccggtgaaa tccaaattgc cgacccacaa agctccggca
      541 cggcttatac tgcgattgcg accttcgtac aacttttagg agaagaaaaa gccttcgact
      601 atttccgcaa attacacaaa aacatttcac aatataccaa atccggcatc acaccggcac
      661 gcaataccgc ccgtggtgaa accgctatcg gtatcggttt cttacacgac tatgcgattg
      721 agaagaaaaa cggggctaac attgaaatga ccgcaccaac agacggcaca ggctacgaat
      781 taggtggtgt gagtatcctc aaaggtgcaa gaaatcttga taatgcaaaa ctgttcgtgg
      841 attggtcgct ttctaaagaa gctcaagaac tctcttggca aaaaggcaat gcgttccaag
      901 tattaaccaa caccaccgca gaatcttccc cttatgctct agatccgaaa aacttaaact
      961 taatcaacta tgatttcgag aaatacggct cgagcgaaga gcgtaaacgc ttgattgata
     1021 agtgggtaaa tgaagtaaaa ttagcgaaat agtgttaatc tttccactga ggggataagc
     1081 aattatcccc tctctaatta taagaatctg tgaggtgtta tgcagaattt ttccttttcc
     1141 cgaccgcttg tttgggtgct tatcgggtta ctcggttttc tcttgttacc gtctaaagcc
     1201 ttagattatg ggctgtttga ctcaacctct gatgaactgc tcgccgcaat gggctgggcg
     1261 tgctgttcgc ctttattttc ctgtcagcga ttgtgctgaa aatcagcctc ggttatgcgg
     1321 tgttgccgtt gattattgcc attatggggc ttgcgacccc aaatttagca acgctcaaag
     1381 taatgcaggg tgaccgcttt attatcggct cgttactgag cattattctg ctgattttct
     1441 tttttattgt gtatccgacc atcgccattt ttgtgtcgat gttctacaac ggctcggaat
     1501 ttgtgccaag ccaagtgctg acaattttgc aacaacctta tgtcgttcga gtcatcggta
     1561 actcgctctc ggttgccggc acggtgggcg ttctctccac cctattcggc ttagcctttg
     1621 ctctctacac cactcggatt gctaaacgct cggcgtttat cgggcggatt ttctcgattt
     1681 tacctatcgt caccccgccg tttgtggtcg gtttaggcgt aaccctgatg cttgggcgtt
     1741 ccggctatgt tactgaattt ttagtggatt actttggctt tgccaacaat tggctgtacg
     1801 gtttcaccgg tattgtgata gcccataccc tcgcgctcac gccaatgtcg tttatgattt
     1861 tggaaggggc attgaaatcc attcacccat cggtggaaga agcagcttac accctgcgtt
     1921 ccaaccgcta tcaagccttt tttaacatta ttttcccatt gttaaaaccg gcattggcaa
     1981 actccttttt agtggtggca attcaatccc tcgccgattt cagtacgccg ttagtattgg
     2041 gcggtagctt tgatgtgatt gcaacccaaa tctacttcta cattgccggt tctcaactgg
     2101 attatgcctc tgctagcacg cttggggcaa ttttgttggt gttctcctta gccattttcg
     2161 tgatccaata cctctggatc ggcaatcgct cttatgtgac ggtgtccggc aaatcctatc
     2221 ggggtgatgt ccaagactta ccaagcggta tgaaatggct gattatttgc accttattgt
     2281 tctggggaac cttcaactta gtgctgtacg gcagtatttt ctacggcagt ttcaccgtga
     2341 actggggtgt ggattatacc ttaacccttg ataactacat caagctattc gggcaagggt
     2401 ttagcgatgg cggtttccct tcgttaattc aaaccgtgat tttcgctgcc gctgccgccc
     2461 cgattactgc actattcggc ttgctgatcg cctatgtgac agttcggcgt gatttcaaag
     2521 gcaagaaaac cctggaattt ttaaccctgc tctgctttgc cgtaccggga acggtggcag
     2581 gtgtttctta cattctcgcc tttaacgatg ccccgattta cctaaccggc accggtatga
     2641 tcatcattct ctcaatggta atgcggaata tgcctgtggg tatgcgagcg gcaattgccg
     2701 gcttagggca gttggataaa tcgctggacg aagcctcgct ctcgctgaaa gccggttcgt
     2761 tcaaaacgat gctgtttgtg gtgttaccgc tactcaaacc ggcactgctc tccgccctcg
     2821 tcaccagctt tgtgcgggca atgacgactg tcagtgcgat tgtattctta gtcaccgccg
     2881 acactcgtgt ggcaacctcc tacattctca accgtgtgga agacggtgaa tacggcattg
     2941 cgattgccta cggctcaatt ttaattgtgg tgatgatggc gattatcctg atttttgact
     3001 ggattgtcgg cgacacccgt atcgcccgtt ctaaggcgaa aaaaatgtaa aaagacatct
     3061 actctctccc tttatgggag agagacagaa aaatacttcg ttcagaagta tttttcagag
     3121 agagggatat aattaaaagg acaatatatg aacaacgatt tcttagtatt aaaaaacgtc
     3181 accaaatctt tcggcaaggt gacggtcatt gataatctca acctcagtat tccgcaaggt
     3241 aaaatggtga cattactcgg gccgtccggc tgtggtaaaa ccaccgtact gcgtttagtg
     3301 gcagggctgg aaaacccgac ttcggggcaa atttttattg atggcgaaga tgttacccaa
     3361 agttcgatcc aacaccgtga tatttgcatt gtgttccaat cttatgcgtt atttccgcat
     3421 atgtcgattg gcgataatgt cggctacggc ttgaaaatgc agggcgtacc gaaagaagaa
     3481 cggctgcaac gagtgaaaga ggcgttggaa ttggtggatt taggcggctt tgaagatcgc
     3541 tttgtcgatc aaatctctgg cggacaacaa caacgtgtcg ccctcgcccg tgccttaatt
     3601 ctgaaaccga aagtgctact gttcgatgaa ccgctgagta accttgacgc taacttacgc
     3661 cgttcaatgc gggagaaaat ccgtgaatta cagcaacgtt taaacattac ttccctttat
     3721 gtgactcacg atcagtccga agcctttgcg gtttcagatg aagtaattgt gatgaacaag
     3781 ggaaaaatta tgcaaaaagc tccagccaaa gagttatacc ttcgccctaa ttctttattc
     3841 ttagcaaatt ttatgggtga aagcagcatt tttgaaggca cgatagctgg caaccaaatt
     3901 aatataaatg gatatcaatt tacgttagca aatgctgaac aatttgagtt acccgatggg
     3961 gaatacttag ttggcattcg tccagaagct attcatttag ctgaacaagg aaatataagt
     4021 caactctgta aaattaaaaa tgcagtttat atgggaaatc attgggaaat tatagctgaa
     4081 tgggaaggga aagatttatt agtcaatact aaacctgaaa atttttaccc tcatatcaaa
     4141 caggcctatg tacattttat cgaacaaggt gtttttcttt taaagaaaga gctataacga
     4201 atttatacta aattaagagg aaggtagtta taactattta gcaattttga gaaaaatagg
     4261 ccgcatgcaa aatctcttga tgacaagcgg tcttttctcg ccga
//
LOCUS       DANLXO010000145         4254 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.147, whole genome shotgun sequence.
ACCESSION   DANLXO010000145 DANLXO010000000
VERSION     DANLXO010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.147"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(47..122)
                     /locus_tag="PXD69_002485"
     tRNA            complement(47..122)
                     /locus_tag="PXD69_002485"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(87..89),aa:Asn,seq:gtt)
     gene            complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXD69_002486"
     CDS             complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXD69_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HDL6284624.1"
                     /translation="MELTDHEMLRYNRQIILKSVDFDGQEKLKASRVLIVGLGGLGCA
                     ASQYLASAGVGHLTLVDFDLVSLSNLQRQILHTDATIGQPKVESAKARLAAINPNIQI
                     ETINQRCSDEQLAKLIANVDLVLDCTDNVTVRNQLNLQCFKQKRPLVSGSAIRFEGQV
                     SVFCYQEQEPCYECLSRLFGDATLSCVEAGVIAPIVGIIGSIQALEAIKVLLNIGRTL
                     SGKLLMIDGLHFSVREMALPKQNNCPVCTSY"
     gene            complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXD69_002487"
     CDS             complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXD69_002487"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDL6284625.1"
                     /translation="MALLALSDALDNMLARLSTPKLVEQLPLNECANRVLAEDIFSPI
                     NVPNFDNSAMDGYAVRISDLAQNLTLNVAGKAFAGNPFNGEIKAGECVRIMTGALVPK
                     GVDAVVMQEETTLNSDGSVTFNHIPKLGSNIRRIGEDVKQGALVLKKGSLLNVASLPL
                     LASLGIASVPVFVKLKVAILSTGDELTSVGEPLSEGKIYDTNRFAVRLMLEKLNCEIL
                     DFGILPDDPILFEQTFRQAQQQADVLITSGGVSVGEADFTKDVLEKLGEIGFWKIAMK
                     PGKPFAFGKLEQAWFFGLPGNPVSALVTFYQLAQPALAKLSGLSTDKIAKLTQNLTAC
                     SAGKLKKAVGRQDFQRGYYYANEKGELEVRAVGTQGSHIFSAFNESNCFIVLEAERGN
                     VDAGEKVTIQPFNSLMY"
     gene            complement(2337..2954)
                     /locus_tag="PXD69_002488"
     CDS             complement(2337..2954)
                     /locus_tag="PXD69_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006719828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDL6284626.1"
                     /translation="MFDSLAVQFVVLWAVIDPIGSVPVYLAKTIGLPIEARRKIALNA
                     VLIAAGILIFFLIGGQVLLESMQIPLPAFQAAGGLVLLLFALTMIFGESKPEQEMRIS
                     SNLNELAVYPLAVPSIASPGAMMAIVLLTDNHRFHIGDQIITAGIMLLVLFITYLLLL
                     AANRIQHLIGNAGAAIISRVMGLILAAIAVNNLLIGVRDFFVQIS"
     gene            complement(3022..4233)
                     /locus_tag="PXD69_002489"
     CDS             complement(3022..4233)
                     /locus_tag="PXD69_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDL6284627.1"
                     /translation="MISRQMQSLLKRLVAQFPAVLVTGARQVGKSTLLQHIGEGYQYI
                     TFDDPMLLELAKQESRLFFLNHQGKLILDEVQYVPEIFALLKLEIDKKQQNGLFLLSG
                     SQAFELMQNVSETLAGRIAILKLQGLSLREILGVKFDQPFLPTTDYLLAREQELKSPE
                     NIWQLIHKGDMPRLYAQEVDWEIYYRSYVATYIERDVRQLTNIASTTDFTRFMVSIAS
                     RSGELLNYSNIAQEVGVSNETIKRWVAILQTSGIIYLLQPYHNNHLKRAIKTPKVYFL
                     DTGLMAYLTKWLTPETIAQGAKSWQFFETFVVSQIIKSFHNQGIEPPIYFYRDTNQKE
                     IDLIIEYDRTLYPIEIKVTASPTKKMAKSFDLLNSVSSEWKLGQGAIINQYPTKLYLS
                     ENLVALPVSYL"
BASE COUNT         1299 a          991 c          784 g         1180 t
ORIGIN      
        1 tataaaagga gacaaataaa acaagaacaa aagaaaaata aaatcttggc tcctcctgcg
       61 ggactcgaac ctgcgacata tggattaaca gtccaccgtt ctaccgactg aactaaggag
      121 gaattaacgg tgtaaataat aggctaaaac gttttagccg tcaaataaaa aaaataaact
      181 gtcgttcatt ttttacattt cttgacattt tttcgccaat aagtatgaga aaaatactta
      241 ataagaggta caaaccggac agttattttg cttaggtaat gccatttctc tgacagaaaa
      301 atgcaagccg tcaatcatta acaattttcc ggaaagagtt ctgccgatat taagtagcac
      361 tttaattgct tccaacgctt gaatactgcc tatgatgcca acaatcggag caatgacccc
      421 cgcttcaaca caacttaaag tcgcatcacc aaacaacctg cttaaacatt catagcacgg
      481 ttcttgttct tgataacaaa atacactcac ctgcccttca aatcgaattg ccgaaccgga
      541 aacaagcggt cgtttttgct taaaacattg caaatttaac tgattacgca cagtaacgtt
      601 atcggtacaa tccagcacta aatctacatt tgcaatcagc ttggctaact gctcatcgga
      661 acatcgctga ttgatagttt caatctgaat gttcggatta atcgccgcta atcgagcttt
      721 ggcagattcc acctttggct gcccgatagt cgcatcggta tgtaaaattt ggcgttgcag
      781 attagaaagt gagaccagat caaaatccac caaagtcaaa tgcccaacgc cggcagaagc
      841 taagtattgc gatgccgcac agcccaaacc acctaaaccg acaatcaaca ctcggctggc
      901 ttttaacttt tcctgcccgt caaaatccac gctttttagg ataatctggc gattataacg
      961 tagcatttcg tgatcggtaa gttccatttt tacacctaaa gagtaaacga tggcgcaagc
     1021 gtccacgctt gtgcctatat ttttattgct agcacaagcg tggacgcttg cgctatctta
     1081 attcattaat acatcagcga attaaacggc tgaatagtga ctttttcccc agcatcaaca
     1141 ttgcctcgtt ctgcttctag cacaataaaa cagttacttt cattaaaagc gctgaaaata
     1201 tgtgagcctt gcgtgccaac tgcacgaact tctaactcac ctttttcatt ggcatagtaa
     1261 tagccccgtt ggaaatcttg gcgaccgacc gcttttttca attttccggc actgcaagcg
     1321 gttagatttt gggttaattt tgcaatttta tctgtcgata aacccgaaag tttggctaac
     1381 gccggttgcg ctaattggta gaaagtcact aatgcagaga cagggttgcc cggcagccca
     1441 aaaaaccaag cctgttctaa tttaccgaat gcaaaaggct tgcccggctt catcgcaatt
     1501 ttccagaaac cgatttcgcc taatttttcc agtacatctt tggtaaaatc tgcctctccc
     1561 acagatacgc cgccactggt aatcaacaca tcggcttgct gttgggcttg cctgaaagtt
     1621 tgctcaaaca gaattgggtc atcaggcaaa atcccaaaat ctaaaatctc gcagttgagt
     1681 ttttccagca ttaaacgcac cgcaaaacgg ttggtgtcgt aaatttttcc ctcactcaaa
     1741 ggctcgccaa ctgaggttaa ttcatcgccg gttgaaagaa ttgccacttt taattttaca
     1801 aaaacaggca cagaagcaat accgagtgaa gctagcaacg gtaaactggc tacattcaat
     1861 aatgagcctt ttttcaagac caatgccccc tgtttaacat cttccccaat gcggcgaatg
     1921 ttactgccta attttggaat atggttaaag gttacagagc catcggaatt taacgtagtt
     1981 tcctcttgca ttacaacggc atcaacgccc tttggcacta atgctcccgt cataatccgc
     2041 acgcattcgc ctgcctttat ttcgccgtta aacgggttac cggcaaaggc tttaccagcc
     2101 acattcaagg ttaaattttg tgctaaatct gaaatacgaa ccgcgtagcc gtccatcgcc
     2161 gaattatcaa aattcggtac attaatcggg gaaaaaatat cctctgccaa cactcggtta
     2221 gcacactcat ttaacggaag ttgttccacc aatttaggtg tcgataaacg agcaagcata
     2281 ttatctaacg catcactcaa agccaaaagt gccataattt cctacctatt caacgtttag
     2341 ctaatttgta caaagaaatc ccgtacgcca atcaacagat tattcaccgc aatcgcagcc
     2401 agaattaacc ccatcactcg gctgataatc gcagcccctg cattaccaat aaggtgctga
     2461 atacggtttg ccgctaatag caacaaatag gtaataaaga gtaccaaaag cataatgccg
     2521 gcggtgataa tttgatcgcc gatatgaaaa cggtgattgt cggttaataa tacgattgcc
     2581 atcatcgccc cgggagaagc aatcgacggt acagctagcg gataaaccgc caattcattc
     2641 agattactgc tgatccgcat ttcttgctcg ggcttgcttt cgccaaaaat catcgttaaa
     2701 gcaaataaca acagcactaa gccgcctgcc gcttggaatg caggtaacgg aatctgcatt
     2761 gattctaaca gcacttgccc accgataagg aagaaaatca aaataccggc ggcaatcaag
     2821 accgcattta gtgcaatttt acgccgtgct tcaatcggca aaccaatggt ttttgccaaa
     2881 taaacaggaa cagaaccaat cgggtcgatc accgcccata aaaccacaaa ttgtaccgct
     2941 aatgaatcaa acatattctc tcctgttatc ttgataattt gcaaaatttt agcataaaac
     3001 aaccgcttgc acggcttttt cttacagata gctcaccggt aacgctacca aattttcact
     3061 taaataaagt ttggtcggat attggttaat aatcgctccc tgccctaatt tccattcact
     3121 agaaactgag tttagcaagt caaaactttt tgccattttt ttggttgggc ttgccgtgac
     3181 cttaatttct atcggataaa gcgtgcgatc atattcaata attaagtcga tctctttctg
     3241 gttagtatca cggtaaaaat aaatcggcgg ctcaattcct tgattatgaa aggattttat
     3301 aatttggctt accacaaagg tttcaaagaa ctgccagctt tttgcccctt gagcaatagt
     3361 ttcgggggta agccatttgg ttaaatacgc cattaacccg gtgtctagaa aatacacttt
     3421 tggggtctta attgcccgtt tcaaatgatt gttgtggtat ggctggagca aatagataat
     3481 gccggaagtc tgcaaaatgg cgacccaacg tttaatcgtt tcattcgata ctccaacttc
     3541 ttgagcaata ttactgtaat tgagtagctc accactacga gaggcaatag agaccataaa
     3601 acgggtaaaa tccgttgtgc tggcaatatt ggttaattgg cgaacatctc gctcaatgta
     3661 ggtcgctaca taagagcgat aataaatctc ccaatccacc tcttgtgcat ataaacgagg
     3721 catatcgcct ttatggataa gctgccagat gttctccggt gattttaatt cttgctcccg
     3781 agctaacaaa tagtcggttg tcggtaaaaa aggttgatcg aacttcaccc ctaaaatttc
     3841 acgcaacgaa agcccttgta attttaaaat agcaatacga ccggcaagtg tttcactcac
     3901 attctgcatt aattcaaagg cttgcgaccc cgaaagtaaa aacaaaccgt tttgctgttt
     3961 tttatcaatt tctaacttta ataacgcaaa aatttcaggc acatactgta cttcgtctaa
     4021 aataagcttg ccttgatggt ttaaaaaaaa caggcgagat tcttgtttag ccagctccag
     4081 caacattggg tcatcaaaag taatatattg atagccctca ccaatatgtt gtaacaatgt
     4141 cgatttacca acctgtcttg cccctgtcac taaaacggca ggaaattgcg ccacgagtcg
     4201 ttttaacagc gattgcattt gccgagaaat catttttcct ccaaaatagc ctaa
//
LOCUS       DANLXO010000146         4136 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.148, whole genome shotgun sequence.
ACCESSION   DANLXO010000146 DANLXO010000000
VERSION     DANLXO010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4136)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4136)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4136
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.148"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(209..1252)
                     /locus_tag="PXD69_002490"
     CDS             complement(209..1252)
                     /locus_tag="PXD69_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL6284628.1"
                     /translation="MQPINIAIAGAGFSSRVFHIPFLKQDARFNIVKVYERTSNNAAE
                     WLPNAETVRDFNALLTPEVDLVLITTPNQTHYAMVKESLLAGKHVLVEKPLVATVAEA
                     EELAELAKRQGKVLYVYQNRRWDSHIATAKSLMEQNLLGELVDCEIRFDRYAKEKNVK
                     VWKESGELGTGLVYDLGVHLIDQALYLFGKPEAVYADVRYQHEGALVDDNFDIQLYYA
                     NGFKVVLKASRYAREPSPTFVLHGKLGSYLKQTPDNQEDLLKNGVQPIGKDWNIEEKE
                     NWGILHTEVEGNVVRQPYRNAEVSYQNLFDDLYQAIAHNAEPIIKLEDVIFVLKVIES
                     VFESAKLGQKIYL"
     gene            complement(1356..1640)
                     /locus_tag="PXD69_002491"
     CDS             complement(1356..1640)
                     /locus_tag="PXD69_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284629.1"
                     /translation="MRYWLISLSILLSGCVVPVTPTGQAGIPMPIIIGVSDPLDSKEV
                     HICTLKPFTQEYRSEHSSRGRAKLNVQKQCRANHSEMFCEEKDIVCKTYD"
     gene            complement(1670..1855)
                     /locus_tag="PXD69_002492"
     CDS             complement(1670..1855)
                     /locus_tag="PXD69_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL6284630.1"
                     /translation="MKCRQATELISQSCDEKLRLQQHMRLQLHLLVCPKCRNFNKNTK
                     KLGKILRAYCNDKDAPF"
     gene            complement(1852..2418)
                     /locus_tag="PXD69_002493"
     CDS             complement(1852..2418)
                     /locus_tag="PXD69_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL6284631.1"
                     /translation="MKSLSSTQIEEIRKQMVKFATLQLADKDLAEDVVQDALTNAYKH
                     SASFRREAALKTWIFAILKNKILDLLRTRKRHIPVSSLCEEEESPSAFFDRHDHWLEH
                     QDVTEWRGVAQSTYQKEFWAIFDICLNKLPAQQARVFMMREHLEMSSAEICQECEISL
                     SNLNVLLHRARLRLQECLSRNWFREESK"
     gene            2527..3480
                     /gene="msrP"
                     /locus_tag="PXD69_002494"
     CDS             2527..3480
                     /gene="msrP"
                     /locus_tag="PXD69_002494"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDL6284632.1"
                     /translation="MKKLTIQDVTPETIFYQRRKIITALGLGIAASALPKVSMAETQR
                     HLQSLQFKPDPNKGLELTPENKVIGYNNFYEFGVDKSAPAKNAANFKTDPWTLEIGGE
                     VENPFSLNHQQLLNTFPLEERIYRFRCVEAWSMVVPWIGFELARLIEMAKPTSKAKYV
                     VFHTLYDPAQMPGQKNRLLGGGIDYPYVEALRLDEALNSLTLLSVGLYGKTLPPQNGA
                     PIRLVVPWKYGFKSIKSIVKITFAEKRPLTTWESLAPNEYGFYANVNPNVDHPRWSQA
                     SERVIGAGGLLSVKRQPTLMFNGYENEVANLYRGLDLKVNY"
     gene            3480..4064
                     /locus_tag="PXD69_002495"
     CDS             3480..4064
                     /locus_tag="PXD69_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoxide reductase heme-binding subunit YedZ"
                     /protein_id="HDL6284633.1"
                     /translation="MLTWLRILIHLGCLLPLVWVAQLLYTGNETILGADPIKELEHFL
                     GYGAIVIFCIMFLLGIALQYLKKNQYQILRRPLGLWAFVWAALHISSYLLLELSLDVK
                     LFFSELAGRPYLILGAAAFFILSIMAITSLPMLKRKLGTRWGTIHQWAYPALVLAMVH
                     YYWSVKSVTFDPIIIGVLVLFIVAHKIQAKFAKK"
BASE COUNT         1258 a          848 c          768 g         1262 t
ORIGIN      
        1 ttaaaactta acatattaag tattctaact acggattgag gttgcatatt agccaatcga
       61 gatgggaaaa gcaatggggg agatgatttt ttagatagtg caagcgtcca cgcttgtact
      121 agaaacaaag ctaaaataat caataggcac aagcgtggac gcttgcgcca tcagagagaa
      181 taacaagcgg tcaaaaatcc tcaaaatttt acaaatagat tttttgccct aattttgcac
      241 tttcaaatac gctttcgatc acttttagca caaaaatgac gtcttcgagt ttgataattg
      301 gctcagcatt gtgagcgatg gcttggtaca aatcatcaaa caagttttga taactgactt
      361 cggcatttcg atagggctgg cgaaccacat taccttccac ttcagtgtgt aaaattcccc
      421 agttctcctt ttcttcgata ttccaatctt tgccaatagg ttgtacgcca tttttcagca
      481 aatcttcttg attatcggga gtttgtttca gataagagcc taattttccg tgtaatacaa
      541 atgtcgggct tggttcacga gcatatcggc tggctttcag caccacttta aaaccgttag
      601 cataatagag ctgaatatca aagttatcat caaccaatgc cccttcgtgc tgataacgca
      661 catcagcata caccgcctcc ggcttcccga aaagatacaa agcttggtca attaaatgta
      721 cgcctaaatc atacactaaa cctgtaccaa gctcgcctga ttctttccat actttaacat
      781 ttttctcttt cgcataacgg tcaaaacgaa tttcgcaatc taccaactct cccagtaaat
      841 tttgctccat tagcgatttt gccgtcgcaa tatggctgtc ccaacggcgg ttttggtaca
      901 cataaagcac ctttccttgc cgctttgcaa gttccgccaa ctcttccgcc tcagccactg
      961 ttgccactaa cggtttttca actaaaacgt gtttgcctgc aagcaatgac tcttttacca
     1021 ttgcataatg ggtttgattc ggtgtggtaa tcagcactaa atccacttct ggcgttaaaa
     1081 gagcgttgaa atcccgcact gtttctgcat tcggcaacca ttctgccgca ttgttagagg
     1141 ttcgttcata tacctttaca atattaaaac gagcatcttg tttcaaaaac gggatatgaa
     1201 aaactcggct ggaaaagccg gcacctgcga tggcaatatt gatgggttgc atagacaatc
     1261 ctcataaaat tttgatgtta tctgcttaaa taaacaagcg gtcaaatttt aggaaaattt
     1321 tgcaaaaaac agataaaata cgaccgcttg tttaactaat cataggtttt gcaaacaata
     1381 tctttttctt cacaaaacat ttcactgtgg tttgcacggc attgcttttg tacatttaat
     1441 ttggctctgc ctcggctact atgttcacta cgatattcct gagtaaatgg ctttagagta
     1501 caaatgtgaa cctctttgga atcaagtgga tctgagacac caattataat cggcataggg
     1561 ataccggctt gccccgtagg agtaaccggc acgacacagc cacttaatag tatgcttaaa
     1621 cttattaacc aataacgcat atttttctcc ttttaaaatg tataataaat cagaacggag
     1681 catctttatc gttacagtaa gctcttaata tcttgcctaa tttcttggta tttttattaa
     1741 aatttcggca tttagggcat accaaaagat gcaactgcaa acgcatatgt tgttgcaaac
     1801 gaagtttctc atcacaagac tgtgaaataa gttctgttgc ttgcctgcat ttcattttga
     1861 ttcctctcta aaccaattgc gagataaaca ctcttgtaaa cgtaaacgag cacgatgaag
     1921 taatacattt aagttagaga gagaaatttc acattcttgg caaatttccg cactactcat
     1981 ctccaaatgt tcacgcatca taaatactcg tgcttgctgg gcgggtaatt tatttaaaca
     2041 aatatcaaaa attgcccaaa attctttttg gtaagttgat tgagctaccc ccctccattc
     2101 agttacatct tgatgttcca accaatgatc gtggcgatcg aaaaaggcac ttggtgattc
     2161 ttcttcctca catagagaac tgactggaat atgtcgtttt cgtgttctga gtaaatctaa
     2221 aattttgttc tttaaaatag caaaaatcca agttttaagt gcagcttctc gccgaaaaga
     2281 ggctgaatgc ttataggcat tggttaaggc atcctgtaca acatcctcag ctaaatcttt
     2341 atcggctagt tgtagggtgg caaatttaac catttgcttt ctaatctctt ctatctgtgt
     2401 agaagataga ctcttcatat atctccttta gggaataccc aataaaaaat tacacttatt
     2461 ttgtaagaat tctagatcag ctgagtccaa aataataaca acaattcata aaaaaaggat
     2521 agttcgatga aaaaattaac aattcaagat gttacacccg aaactatttt ctaccaacgc
     2581 cgtaaaatta ttaccgcgtt aggtttaggt attgcagctt ctgcattgcc taaagtaagt
     2641 atggcagaaa cacaaagaca cttgcaatca ctacagttta aaccggatcc aaataaaggg
     2701 cttgaactca ctccggaaaa caaagtaata ggctataaca atttctatga gtttggcgtg
     2761 gataaaagtg caccagcaaa aaatgcggca aacttcaaaa ccgatccttg gacattggaa
     2821 attggcggag aagttgaaaa tccgtttagc ttaaatcatc aacaattgct taatacgttt
     2881 ccactagaag aacgcattta ccgttttcgc tgtgttgaag cgtggtcaat ggttgtgccg
     2941 tggatcggct ttgagttagc tcgcttaatt gagatggcaa aaccaaccag taaagccaaa
     3001 tatgtggtct ttcacacttt atatgatcct gcacaaatgc cggggcaaaa aaatcgcttg
     3061 ctaggcggtg ggattgatta tccttatgta gaagctttac gcttagatga agccttaaat
     3121 tcattaacac tactatccgt cggtttatac ggtaaaaccc tgccaccgca aaacggtgct
     3181 cctattcgct tagtcgtgcc ttggaaatat ggctttaaaa gtattaagtc gattgtgaaa
     3241 atcacctttg ctgaaaaacg cccactcact acttgggaaa gtcttgctcc aaatgaatat
     3301 ggcttttatg ctaatgtgaa tccaaatgtt gatcatccac gttggtcgca agcatctgaa
     3361 cgagtaattg gtgcaggcgg gttattatcc gtcaaacgcc aaccaacact aatgtttaat
     3421 ggctacgaaa atgaagtggc aaatttatac cgtggcttag atttaaaggt gaactactaa
     3481 tgctaacctg gttacgtata ctcattcatc ttggctgttt attaccgcta gtttgggtag
     3541 cacagctatt atatacgggt aatgaaacaa tattaggtgc cgatccgatt aaagagctgg
     3601 agcattttct cggttatggt gcaatcgtca ttttttgtat aatgtttcta cttggtattg
     3661 ccctacaata cctaaagaaa aaccagtatc aaattttacg ccgtccattg ggcttatggg
     3721 cgtttgtatg ggcagctcta catatttcaa gctatctatt gttagaatta agccttgatg
     3781 taaaattatt ttttagcgag cttgccggtc gcccatattt gattttagga gcagctgctt
     3841 ttttcattct aagcataatg gcaataactt cgctgcctat gctaaaacga aaattaggaa
     3901 cacgctgggg gacgattcac cagtgggctt atcctgcatt agtattggcg atggtacatt
     3961 attattggtc ggtaaagagc gtaacattcg atccaattat catcggagtc ttagtgctgt
     4021 ttattgttgc tcataaaata caggctaaat ttgcaaaaaa atagcaaaat cacaccgctt
     4081 gcagcagtca aactacatac aaaaaataag gggctgtcct agataacgac taaaac
//
LOCUS       DANLXO010000147         4082 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.149, whole genome shotgun sequence.
ACCESSION   DANLXO010000147 DANLXO010000000
VERSION     DANLXO010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4082
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.149"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..146)
                     /locus_tag="PXD69_002496"
     CDS             complement(<1..146)
                     /locus_tag="PXD69_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6284634.1"
                     /translation="MRKSRLSQYKQNKLIEQFVAGVTARTASELVNVNKNTAAYYFHR
                     LRLL"
     gene            475..1833
                     /gene="mnmE"
                     /locus_tag="PXD69_002497"
     CDS             475..1833
                     /gene="mnmE"
                     /locus_tag="PXD69_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDL6284635.1"
                     /translation="MKDTIVAQATPIGRGGVGILRVSGPLAETVAQAVLGKTLPPRIA
                     NYLPFKDEDGTVLDQGIALFFKAPNSFTGEDVLELQGHGGQVILDLLLKRILQVKGLR
                     IARAGEFSEQAFLNDKLDLAQAEAIADLIDATSEQAARSALKSLQGEFSNKINALVDS
                     VIYLRTYVEAAIDFPDEEIDFLADGKIEAKLNEIIAQLDGVRREAKQGSILREGMKVV
                     IAGRPNAGKSSLLNALAGREAAIVTNIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS
                     DEVERIGIQRAWEEIAQADHVLLMIDSTEQQADQFRQEWAEFLAKLPANMPVTVIRNK
                     VDLSGEQEGLIQVDDFTMIRLSAQTKVGVDLLREHLKKSMGYQSSTEGGFLARRRHLQ
                     ALETAAEHLERGHIQLTQFLAGELLAEELRMVQNALSEITGQFTSDDLLGNIFSSFCI
                     GK"
     gene            1834..3099
                     /gene="tilS"
                     /locus_tag="PXD69_002498"
     CDS             1834..3099
                     /gene="tilS"
                     /locus_tag="PXD69_002498"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDL6284636.1"
                     /translation="MALFNRFQTQCATHLPNQTAFLIGLSGGVDSVVLLHLFARTSFH
                     VRAIYVHHGLSPNADDWAAFCEQYCKRLNIPFILQKVRVDSSNGVENGAREARYQAIQ
                     QQLKPNEVFATAHHLDDQAETFLLALKRGSGVKGLSAMQAVTFLQNFTVFRPLLTFTK
                     SDLMGYAVQHQLGWIEDESNADNRYDRNFLRNSILPLLNQRWQHFSQMVARSAQHCAE
                     QQALIEELLSNELKSRTGEKQQLNINGFGQFSLAKQQQLSRLWLEQNGVRMPSQAQLQ
                     AVISELIFAKADKNPQVKVGENIIRRYQQAIYVTEEIADIPPFEVVLPTETKVELPYQ
                     LGTIIRQQQEIICKKNGKNHRLQLPQELAQSTISIKIGQLGKVKCYGKAQREEMKKIW
                     QNHGIPVWERNRTPLIFWQDELVGLLPIL"
     gene            complement(3089..3982)
                     /gene="xerD"
                     /locus_tag="PXD69_002499"
     CDS             complement(3089..3982)
                     /gene="xerD"
                     /locus_tag="PXD69_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDL6284637.1"
                     /translation="MAELDPIIEQFLDTLWQEHGLSENTVASYRSDLERFSDYFSEPK
                     AFLSLDHIDLQGFLGERLEQGYKATSSARMLSCLRKFFRFLCLEHYRQDDPTLTLSSP
                     KRGASLPKSLSEDQVMDLLDAPNTLDPIELRDKAMLELLYATGLRVTELVSLSMDNIS
                     LKQGVVRIIGKGDKERLVPLGEEANYWIQEFFQYGRPILLNNQQSDVVFPSRRGQQMT
                     RQTFWHRIKHYAVLAGIDADKLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQ
                     IYTQVAKARLKSLHQQFHPRG"
BASE COUNT         1186 a          947 c          922 g         1027 t
ORIGIN      
        1 ataagcaacc gcaagcgatg gaagtaatac gccgccgtgt ttttgtttac attgaccaac
       61 tcagatgctg ttcgggctgt tacccctgca acaaactgct caatgagttt gttttgtttg
      121 tactgactta gacgactttt tctcatttgg gtatcttaac ctaaatggag tttttagtcg
      181 ttatctagga cagccccaaa gaaaaacacg ctttgcattg aaaaaaaggc ggtggtggaa
      241 ataaaacggc gtaggagtaa tagtttttct aaagacattc agaatggttg aattggttaa
      301 ataaagagcg gttattctac cttttaagtc aaccccaatc aatcggcttt tgttttacct
      361 ttggcgtggg tttcggtatg ataagcgata tgtagtggcg ggtcctgtgc ccgcctaaat
      421 accaatgata acttgcgggc gagcacagga ctcgccccta cgataaacaa gaaaatgaaa
      481 gacaccattg ttgctcaagc aacaccgatt ggcagaggcg gtgtggggat tctgcgagtt
      541 tccggtccgc ttgccgaaac cgttgctcaa gccgtattag gcaaaacatt gccaccccgt
      601 atcgcaaatt atttgccgtt taaagacgaa gatggcactg tgttggatca aggcatcgcc
      661 ttatttttta aagctcccaa ctcctttacc ggcgaagatg tgcttgaact tcaaggacac
      721 ggtgggcagg ttattttaga tttactgctc aaacgcattt tacaagttaa ggggctacgc
      781 attgcccgag caggtgaatt ttccgaacag gcatttttaa acgataagct cgaccttgcc
      841 caagctgaag cgattgcgga tttaatcgac gccaccagcg agcaagccgc tcgttcagcc
      901 ctgaaatcac tacagggtga attttctaat aaaatcaatg cgttagttga ttcagtaatt
      961 tatttacgca cttatgtgga agcggcgatt gacttccccg atgaggaaat tgactttctg
     1021 gcagacggta aaatcgaggc aaaattaaat gagattatcg ctcaattaga cggtgttcgc
     1081 cgtgaagcga aacaaggctc gattctgcgt gaaggaatga aagtagtgat cgccggtcgc
     1141 ccgaatgcag ggaaatcaag cttgcttaac gccttagccg gacgagaggc ggcgattgta
     1201 accaatattg ctggcacaac ccgtgatgtg ttgcgtgaac atattcacat tgacggaatg
     1261 ccgttgcata ttatcgacac cgccggtctc cgtgatgcca gtgatgaggt ggaacgtatc
     1321 ggcattcagc gtgcttggga agaaatcgcc caagccgacc acgttttatt aatgattgac
     1381 agcaccgagc aacaagccga tcagttccga caagagtggg cggaatttct agccaaactg
     1441 ccggcaaata tgcctgtgac cgtaattcgc aacaaagtcg atttatccgg cgagcaggaa
     1501 ggcttaattc aggtggacga tttcacgatg attcgcctct ctgcccaaac caaagtcggc
     1561 gttgatttat tgcgtgaaca cttgaagaaa tcaatgggct accaaagttc tacggaaggc
     1621 ggattcttgg ctcgccgccg tcatctgcaa gcattggaaa ccgctgccga gcatttagag
     1681 cgagggcata tccagcttac tcaattctta gccggcgaat tgttagcgga agagttgcgt
     1741 atggtgcaaa atgccttaag tgaaattacc ggccagttca cctctgatga cttattaggc
     1801 aacattttca gctcattttg catcggtaaa taaatggcac tttttaaccg ctttcaaacc
     1861 cagtgtgcaa cgcatttgcc gaaccaaacc gcctttttaa tcggcttaag cggtggggtg
     1921 gattcggtgg tactactcca cctttttgcc cgcacctcat ttcacgttag ggcaatttat
     1981 gtccaccacg ggctaagccc aaatgcggac gactgggcag ccttttgcga acaatattgc
     2041 aagcggttaa atattccctt tattttacaa aaggtcagag tggatagctc aaacggcgtt
     2101 gaaaacgggg cgagagaagc tcgttaccaa gccattcaac aacagcttaa gcccaatgaa
     2161 gtgttcgcca ccgcccacca tttagatgac caagccgaaa cttttttgct cgccctcaag
     2221 cgaggcagtg gagtcaaagg attatcggcg atgcaagcgg tcactttttt gcaaaatttt
     2281 accgtttttc gaccgctact cacttttact aagtcagatt tgatgggtta tgccgttcaa
     2341 catcagctag gttggattga ggacgaaagc aatgccgata accgttacga ccgtaatttc
     2401 cttcgcaata gcatcttgcc actactcaat caacgttggc agcacttcag ccaaatggtt
     2461 gcccgttccg ctcagcattg tgcagaacag caagccttga tagaagagct attaagcaat
     2521 gaactcaagt caagaacagg ggaaaaacaa caactcaaca ttaacggctt tgggcaattt
     2581 tcacttgcca agcaacagca acttagccgc ctttggctgg aacaaaacgg agtgagaatg
     2641 ccaagccaag cccagctaca agcggtcatt tctgaactga tttttgcaaa agccgataaa
     2701 aacccacagg ttaaagtcgg cgaaaatatt atcagacgct atcaacaagc tatttacgtt
     2761 accgaagaga tcgccgacat tccgccgttt gaggtagtac ttcccacaga aaccaaagtg
     2821 gaattaccct atcagctcgg tactattatt cgccaacaac aagagatcat ttgcaaaaaa
     2881 aacgggaaaa atcaccgctt gcaactgccc caagagctgg ctcaatcaac tatttctatt
     2941 aaaatcgggc aactaggcaa agtaaaatgc tacggcaagg ctcaacggga agaaatgaaa
     3001 aagatttggc aaaatcacgg catacctgtt tgggaacgca accgtacacc gctgattttt
     3061 tggcaagacg aattagttgg cctattacct atcctctagg gtgaaattgc tgatgaagcg
     3121 atttcaaacg ggcttttgcc acttgagtgt aaatctgggt ggtcgataaa tcactatgcc
     3181 ccagcaacat ctgtaccact cgcaaatcag ccccatgatt gaccaaatgg gtcgcaaagg
     3241 cgtggcgaag cacgtgaggc gagagtttat ctgcatcaat acctgcaagc acggcatagt
     3301 gcttaatccg atgccaaaac gtctgccttg tcatctgctg acctcgccgg ctcggaaata
     3361 caacatcaga ctgctgatta ttcagcaaaa tagggcgacc gtactggaaa aactcctgta
     3421 tccaataatt cgcctcctcg cccaatggca ctaaccgctc tttatcccct ttaccgataa
     3481 ttctcaccac cccttgtttg aggctgatat tatccatcga aagcgacacc agctccgtta
     3541 cccgcagacc ggtggcatac agcagctcca gcattgcttt atcccgtaac tctatcggat
     3601 ctaacgtatt cggggcatct agcaaatcca ttacctgatc ttcacttaag gatttgggta
     3661 aagaagcacc ccgtttaggg gaagaaaggg ttaaagtcgg gtcatcttgg cgataatgct
     3721 caaggcataa aaaacggaaa aatttcctta aacaactcaa cattctggca gagcttgtcg
     3781 ccttatagcc ttgctccaaa cgctcgccga gaaaaccttg taagtcgata tgatcgagag
     3841 acagaaatgc tttaggttca gaaaaataat cggaaaaacg ctctaagtca gaacgataag
     3901 aggcaacggt attttcagac aaaccgtgtt cttgccatag tgtatcgaga aattgttcaa
     3961 taatagggtc aagctcagcc atacaagcgg gtatattttc aggaaatttt gcaaatttta
     4021 acagaattaa atctataaaa atacaaaagc gatagaaacg aaaaaaccga ttagcttatg
     4081 ct
//
LOCUS       DANLXO010000148         4067 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.150, whole genome shotgun sequence.
ACCESSION   DANLXO010000148 DANLXO010000000
VERSION     DANLXO010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4067
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.150"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..641
                     /locus_tag="PXD69_002500"
     CDS             <1..641
                     /locus_tag="PXD69_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284638.1"
                     /translation="NDIKSDNWTSAAINFHLGMEKVPLNDLIYKEIYNYWDKTSLKDE
                     SERIISASIEFSNYFANKYSENIEEGIKNAEKEFKKNYNKSLRYNAKKAQQRVQKYVE
                     KVNQKNPQALKDLDNISNLKKINENLKKAAKFTGIISSIKDYYDLAEGFRNGIKSNDW
                     EPFLKTSAQIGASALMSMLVASMITGPTTIGSIIISAAFISIGGYIISLASR"
     gene            1117..3156
                     /gene="malQ"
                     /locus_tag="PXD69_002501"
     CDS             1117..3156
                     /gene="malQ"
                     /locus_tag="PXD69_002501"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL6284639.1"
                     /translation="MSNKQNTAHYFYSPNIKEYASPSAFEKIERLLNTDNDLQKNNQI
                     LPLVKVITQPNAEQQAVEISLNFTNVAKWQIVLENGEVRNGEIKAEQSVLTLPADLPL
                     GYHQLSISTENDEESCSLIVTPPKAFQPKPLEERKKLWGAFLQLYTLRSDNNWGIGDF
                     GDLKQFLANISDYGADFVGLNPIHALFPADPDAASPYSPSFRLWQNIIYIDVSAVEAF
                     QQSEQAQQWFHTKETQQQLAELRAKDFVDYSQVAQLKLKALQFAFEHFSQSSQQQSQT
                     AFDAFIEQAGEPLKIQATFDALHHWISSEFGEKGGWTNWAEEYQSYYSPKVAEFQISQ
                     ATQIRFYMWLQFVANQQLAECNRFAQSLSMPIGFYRDLAVGVTQSGAETWADKALFVQ
                     EASIGAPPDMLAPNGQSWGLSPMHPHILQSRGYQPFIDLVRANMKHCGALRIDHILGF
                     ARMWWVANGESAKEGIYVRYPLEDLLSILALESQRHQCLVIAEALGIVPEGILDSLEQ
                     KGIFAYNVFYFEKAENAFKPLENYPYQAMTTLSTHDLPTIQGYWKGYDFELGEKFDTY
                     PSKAVLRKLKEERSYDRLNIRNAVEKVIALEPNEVGVTIKFTHQLQRYVAHTHSALFG
                     TQPEDWLNMLEPVNIPGTSTEYPNWRRKLSATTEQIFANKDIQQLLKDINEIRKG"
     gene            complement(3224..3955)
                     /locus_tag="PXD69_002502"
     CDS             complement(3224..3955)
                     /locus_tag="PXD69_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HDL6284640.1"
                     /translation="MGCSSFSTKLKQEFFSGWTTFEASWLIVFLAIQIGIFIYQPDTW
                     IATIAAITGILCVVFVGKGKISNYLFGLISVSLYAYISYTFQLYGEMMLNLLVYVPVQ
                     FIGFYFWRKNMTSENTVNNAGVEEVIAKALTAKQWVIVAITTIIGTFLYIELLKYLGS
                     ALAILDGATVVISIVAQILMVLRYREQWALWIIVNIMTISLWTAMYFQNGETSLPLLV
                     MYVMYLCNSIYGYYNWIKLHRKHQQ"
BASE COUNT         1423 a          776 c          735 g         1133 t
ORIGIN      
        1 ttaatgacat caaatcagat aattggacaa gtgcagcaat taactttcat ttaggtatgg
       61 agaaagtacc attaaatgat cttatttata aagaaatata taactactgg gataaaacat
      121 cattgaaaga tgaatcagag aggattatat cagccagtat tgaattcagt aactattttg
      181 ctaataagta ctctgaaaac attgaagaag gcattaaaaa tgcagaaaaa gaatttaaaa
      241 agaattataa taaaagtcta agatataatg ctaaaaaagc acagcagagg gtgcaaaaat
      301 atgtcgaaaa agtcaaccaa aagaatcctc aggcactaaa agatctcgat aacatatcca
      361 acttaaaaaa aattaatgag aatttaaaaa aagcagcaaa atttactggt attattagca
      421 gtattaagga ttattacgat ctagcagaag ggtttagaaa tggcataaag tctaatgatt
      481 gggaaccttt tttaaagaca tctgctcaga taggtgcttc agctttaatg agtatgttag
      541 tagcctcaat gataacaggc ccaacgacaa ttgggagtat tattattagt gctgcattta
      601 tttctatagg gggatatatt atttcactag cttcccgtta gatagtcttt gttatactca
      661 ataacctact atactaccta taggctattg aactatcata catcagctct attaaccaaa
      721 aaaacaaaaa aaaatattgc aaataaaaat aaaattattg agataggtcc agagtacata
      781 attaactcat actttttttt aagtttaatc ctaagagcct gagctacaaa aggatataaa
      841 aataaattaa ccagcaaata taatagagtt ataaaataaa tgaaaaatgt atttgaattc
      901 caggcctcaa agctacgcaa atcagaaaaa agcacagcac aggatattaa taaaaacaaa
      961 aatggtatat ttaataataa aacataaccc tttagagtta aattaaattt ttttaacatc
     1021 atatcacaaa gacaaacctg ttgcctactc ttcttactca tattaatctt cacaagatcg
     1081 ttattttaac aaatacagta aaggaaaaaa gtcataatgt caaacaaaca aaatacagct
     1141 cactattttt actccccaaa tattaaagag tatgccagcc cctctgcttt tgagaaaata
     1201 gagcggcttt taaataccga taacgatttg caaaaaaata atcaaattct accgcttgtt
     1261 aaagtgatta ctcagccaaa tgccgagcaa caagcggtcg aaatttcgct gaattttaca
     1321 aatgtagcaa agtggcaaat tgtgcttgaa aatggtgagg ttcggaacgg tgaaattaag
     1381 gcagagcaat cagttctaac cctgcctgcc gatttgcctt taggctatca tcagctttct
     1441 atttcaactg aaaatgatga agaatcttgc tcgctgattg taacaccgcc gaaagctttc
     1501 cagcctaagc cattggaaga aaggaaaaag ctctggggtg catttttaca gctttatact
     1561 ttgcgttccg ataacaactg gggaattggc gattttggcg atctcaaaca attccttgcc
     1621 aacatttctg attatggtgc agattttgtg ggcttaaacc ctattcacgc cctctttccg
     1681 gcagatcctg atgcggcaag cccttacagc ccgtcctttc gactttggca aaatattatt
     1741 tatattgatg tttcagcagt agaagccttt caacaatctg aacaggctca acaatggttt
     1801 cacaccaaag aaactcaaca gcaacttgcc gaattgcgag ccaaagattt tgtcgattac
     1861 agccaagtag cgcaactgaa attaaaggct ctgcagtttg cttttgagca tttttcacag
     1921 tcatctcaac aacaatcgca aacagcgttc gatgccttta ttgagcaagc aggcgagcca
     1981 ttaaaaatcc aagcaacgtt cgatgctttg caccactgga tttcatctga atttggcgaa
     2041 aaaggcggct ggacaaactg ggcggaggaa tatcaaagtt actattcgcc taaagtagct
     2101 gaatttcaaa tatcgcaggc aacgcagata cgtttttata tgtggttgca atttgtggca
     2161 aaccagcaat tagcagaatg caaccggttt gctcaatcac tttcaatgcc gattggtttt
     2221 taccgcgatt tagccgttgg tgttactcaa agcggagcgg aaacttgggc ggataaagcc
     2281 ctatttgtgc aagaggcgtc aatcggtgca ccacctgata tgcttgcccc gaacggacag
     2341 agctggggac tttcgccaat gcacccgcat attctacaaa gccgaggtta tcagccgttt
     2401 attgatttag tgcgtgctaa tatgaaacat tgtggggcat tgcgaatcga ccatattctc
     2461 ggcttcgccc gtatgtggtg ggtggcgaac ggtgaatcgg caaaagaagg gatttatgtc
     2521 cgttatccgc tcgaagattt gctctctatt ttggcattag aaagccaacg tcaccaatgt
     2581 ttagtgattg cagaggcact tggcattgtg cctgaaggca ttttggactc tctcgagcaa
     2641 aagggcattt ttgcctacaa tgttttttat tttgaaaagg cagaaaacgc gtttaaaccg
     2701 ctggaaaatt atccttacca agcgatgaca actctaagca cccacgattt accgactatt
     2761 caaggctatt ggaaaggcta tgattttgag ctaggcgaaa aatttgacac ttacccaagc
     2821 aaagccgtat tgagaaagct gaaagaagag cgttcgtacg accgcttgaa tatccgtaat
     2881 gcggtggaaa aagtgatagc actcgagcca aatgaagtgg gagtaacaat aaaatttacc
     2941 caccaattac aacgctatgt ggctcacact cacagtgcat tattcggtac acagcccgaa
     3001 gattggctca atatgttaga gccggtgaac attccgggaa ccagcaccga ataccctaac
     3061 tggagaagaa aattatccgc aaccaccgag cagatttttg caaataaaga tattcaacaa
     3121 ctgctaaaag atataaacga aattcgtaaa ggataataac aagcggtcat ttttaggtaa
     3181 atttttacaa aaaatgaccg cttgtaattt gtatttattc gctctattgc tgatgttttc
     3241 tgtgaagttt aatccagttg taataaccgt aaatagagtt acataaatac atcacataca
     3301 tcaccaacag cggcaagctg gtttcgccgt tttggaagta cattgccgtc cataaagaaa
     3361 tggtcataat attcacgata atccacaatg cccattgctc acggtagcga agtaccatca
     3421 aaatttgtgc cacaatcgaa ataaccactg ttgcaccatc taatatagct aacgcactgc
     3481 ctaaatattt aagcaattca atataaagaa atgtgccgat aatggtggta atggcgacaa
     3541 tcacccactg ttttgcggtt aaagctttag caattacctc ttccacacca gcattattta
     3601 ccgtgttttc gctggtcata tttttacgcc agaaatagaa accgataaac tgcaccggca
     3661 catatacaag taaattcagc atcatttcac catataactg aaaggtataa gagatataag
     3721 cataaagcga aacggaaatt aagccgaata gatagttact gatttttcct ttaccgacaa
     3781 ataccacgca taaaatacct gttattgccg caatagttgc aatccaagta tcgggttgat
     3841 aaataaaaat accgatttga atcgctaaaa aaacaatcaa ccaacttgcc tcaaaagtag
     3901 tccaaccact aaaaaactct tgttttaact tagttgaaaa agatgaacag cccatatttc
     3961 ctccatataa agtgaagtat tcttttcaaa ttctaagtta tttaaattaa gaaatcaaaa
     4021 tacagagtac cttttgataa atatacgaaa catttattat attaata
//
LOCUS       DANLXO010000149         4042 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.151, whole genome shotgun sequence.
ACCESSION   DANLXO010000149 DANLXO010000000
VERSION     DANLXO010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4042
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.151"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(426..1520)
                     /locus_tag="PXD69_002503"
     CDS             complement(426..1520)
                     /locus_tag="PXD69_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL6284641.1"
                     /translation="MKKTTLAILASALIANSALAITIYDHKETGTQIEFIGSARIKWE
                     STSDKTSPVNGKATRNHVNHAVDNNGSRFGFRLTQQVGHGFYALGRVEWRMRGDSSSQ
                     HNFDHIYDHQLYAGIGHKQYGELTYGNMTNIADEVKQTDLPNTLSLSDGLLTGSSRRT
                     LQYVYKGIEGLKLGAFYGGNSQRGNNGLDLVNKRKDIWGAAAIYNYKIDDNQSLKLAT
                     GATRERSEQSIGNYERIALAFGTAYTYGKTTLGLDLERRETEDQNAIGHKRIEKEVRT
                     VLLHRLTDQWNAYTMYAYKENKLNAVGLANDSKVKRNQFMLGTEYYIVPKHLKGFVEW
                     QATRAKHYTNDVKTAKSRNYTTVVGLRAYW"
     gene            1654..2832
                     /gene="lpxB"
                     /locus_tag="PXD69_002504"
     CDS             1654..2832
                     /gene="lpxB"
                     /locus_tag="PXD69_002504"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDL6284642.1"
                     /translation="MKQQFPVIGLVAGEVSGDILGAGLIKALKVHYPNARFIGVAGSR
                     MIEAGCQSLFDMEELSVMGLAEVVKHLPRLLKRRKQVIDEMLKLKPDVFIGIDAPDFN
                     LTVEEKLKASGIKTIHYVSPSVWAWRQKRVFKIARAANLVLAFLPFEKAFYDKFNVPC
                     RFIGHTMADAIPLEPNRTEACLALNIDESKRYMAILVGSRGSEIQFLAEPFLKAAQLL
                     KARFPDLQFLVPMVSQKRMEQFNAIKQQVAPELELNIIQGKARQAMIASECTLLASGT
                     AALEAMLCKSPMVVGYRMKPLTYWLAKKLVKTDYISLPNLLAQAPLVPELIQEACNPE
                     NLAQELSLFLADDEKNQQHKALLKQQFMQLHQSIQCNADEQAAQAVIDLLNGSTSGQI
                     "
     gene            2859..3911
                     /gene="sohB"
                     /locus_tag="PXD69_002505"
     CDS             2859..3911
                     /gene="sohB"
                     /locus_tag="PXD69_002505"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HDL6284643.1"
                     /translation="MWKEVLLNYGIFLLELLTVFGIIAVVVMLILESKKQNENGSISI
                     TNLSEKYKEQQKSLSGFFLSEEELKHQEKQEKKVAKEKAKAEKKRLKAGEECVESPSR
                     LFVLNFNGDMMAHEVNSLRREIDAVISLANPEKDEVLLKLESPGGVVHGYGLAASQLQ
                     RLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVPNIHRLLKKH
                     DIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHSLFKQFVARHRPQLDIEQVA
                     TGEHWFGQQAIELNLVDEIATSDDLLLNAIKEKEVIELKYKEKKKLAQKLGSQFEQSA
                     ENLLAKILHKSRSTLM"
BASE COUNT         1206 a          695 c          879 g         1262 t
ORIGIN      
        1 ccgatggcaa ccttacttga tggaaaacgg atttgggtgg aaaagaattt aagctcaaat
       61 taatctgaca gacacggtaa tttaaaacgg gggactgtca gattaggttt gatcttctac
      121 atataataac ccctcatcac tttttgcagt ttaacctctt ttgcaacaga taatttaaat
      181 ttaggcgttt tggctgctca gttattgcca ttatgattat attagttcac actaaaattt
      241 tagtgttgtt tcttaaagct gaagatgcta ataggtgagt aagcggtttt taccactttg
      301 aagataaatg caatagcttc ttgtttgaag gattagttgt atttaatcat aaaaaatctg
      361 caccttaatc agttggttag cccaactttt aggtgcagat cattctagta cgcttttcag
      421 ttttattacc aatatgctcg taagcctaca acagtcgtat aattgcgaga ttttgcggtt
      481 tttacatcat tagtatagtg tttagcacga gttgcttgcc attcaacaaa gccttttaag
      541 tgttttggaa caatgtaata ttccgttccc aacataaatt ggtttctttt aactttgcta
      601 tcatttgcca agcctacagc attaagtttg ttttctttat aagcatacat tgtgtaagca
      661 ttccattgat cggttaaacg atggagtaac acagtgcgaa cttctttttc gatacgtttg
      721 tgaccgatag cattttgatc ttccgtttca cggcgttcta aatctaagcc aagggtagtt
      781 tttccgtagg tataagctgt accgaaggca agagcaatgc gttcataatt gccgatagat
      841 tgctcagaac gctcacgggt tgcacctgtt gctaatttta agctttggtt atcatcaatt
      901 ttatagttat aaattgctgc tgcaccccaa atatctttac gtttattgac taaatctaag
      961 ccattgtttc cacgttggct atttccgcca tagaatgctc cgagttttaa tccttcgatg
     1021 cctttgtaaa catattgaag cgtacgtcgt gatgaaccgg taagtaagcc atcacttaag
     1081 ctgagtgtat ttggtaagtc agtttgtttt acttcatcgg caatattagt catattgccg
     1141 tatgttaatt caccgtattg tttatgcccg attcctgcat agagttgatg atcataaata
     1201 tgatcgaagt tatgttgtga gcttgaatcg ccacgcatac gccattccac acgacctaaa
     1261 gcatagaatc cgtgacccac ttgctgggtt aaacggaaac caaaacgaga gccgttgtta
     1321 tccactgcgt gattaacgtg gttgcgggta gctttaccat ttaccggtga ggttttatct
     1381 gaggtgcttt cccacttaat acgagcagaa ccaataaatt caatttgtgt accggtttct
     1441 ttatgatcgt aaatcgtaat agctagagct gagtttgcga ttaaggctga tgctaaaatc
     1501 gctaatgttg tttttttcat aaaaatcact ccatatgaat agataaaggg aggtagtgta
     1561 tgtgaatatt cattgctaga caataatgtt ttgttagttt atatgatgat tggttataat
     1621 agagtcactt acagatcttc aataatattt aatatgaaac aacaattccc cgttattggc
     1681 ttagttgctg gtgaggtctc tggcgatatt cttggtgccg ggttaattaa ggcgttaaaa
     1741 gtacattacc cgaatgctcg atttatcggt gttgcaggct ctcgaatgat tgaggctggc
     1801 tgccagtctt tgtttgatat ggaagagctt tctgtaatgg ggctagcaga ggtggttaaa
     1861 catttacctc gtttacttaa gcgtcgtaaa caggttattg atgagatgct taaattgaaa
     1921 ccagatgtat ttatcggtat tgatgcaccg gattttaatt taaccgttga agaaaaactc
     1981 aaagcgagtg ggattaaaac aatccattat gttagccctt cggtgtgggc ttggcgacaa
     2041 aagcgggtgt ttaaaattgc cagagcagct aatttagtgt tggcatttct gccatttgag
     2101 aaagcgttct atgataaatt caatgtgcct tgtcgtttta tcgggcatac gatggcagat
     2161 gcgatcccac tcgaaccaaa tcgtacagag gcatgtttag cgttaaatat tgatgaatcc
     2221 aagcgatata tggcaatttt ggtgggaagc cgtggcagtg aaattcagtt tttggctgag
     2281 ccttttttga aggctgctca gttgttaaaa gcccgttttc cggatttaca gtttttagtg
     2341 ccaatggtca gccaaaagcg aatggagcaa tttaatgcaa ttaaacagca agtagctccc
     2401 gagttggaac tgaatattat tcaaggcaag gctcgtcagg ctatgattgc gtcagaatgt
     2461 actcttttgg catcgggaac agcagcacta gaggcaatgt tgtgcaaatc tccgatggta
     2521 gttggttata gaatgaaacc gctgacttat tggttagcaa aaaaattagt gaaaaccgat
     2581 tatatctcct taccgaattt attggctcaa gccccattgg taccagaatt gatccaagaa
     2641 gcatgcaacc cggaaaattt agctcaagag ttatctctat ttttagctga tgatgagaaa
     2701 aaccaacaac ataaagcatt gctaaaacag cagtttatgc agctacatca atcaattcaa
     2761 tgtaatgctg atgagcaagc tgcccaagcg gttatcgatc tcctaaacgg ctcgacaagc
     2821 ggtcaaattt agttagtttt ttgtaaaaag gaaaatttat gtggaaagaa gtattactta
     2881 attatggtat ttttttatta gagttattaa ctgtatttgg cattattgca gtggtggtga
     2941 tgctgatttt ggaatcgaaa aagcagaatg aaaacggctc aatttcaatt accaatttat
     3001 ctgagaaata taaagagcag caaaaatctc tttccggctt ttttctaagt gaggaagaat
     3061 taaaacatca ggaaaagcag gagaaaaaag tagcaaaaga gaaagctaaa gcagaaaaaa
     3121 aacgcttaaa agcaggcgaa gaatgtgtag aaagcccttc ccgtttattt gtattgaatt
     3181 ttaatggcga tatgatggct cacgaagtaa attccctacg ccgtgaaatt gatgcggtaa
     3241 ttagcctcgc gaatccggaa aaagatgaag ttttacttaa acttgaaagt ccgggcggag
     3301 tggtgcacgg ttatggattg gctgcttcgc agttacaacg tttgcgtgat cgcaatattt
     3361 atttaaccgc agcggtagat aaagtagctg ccagcggtgg ttatatgatg gcgtgtgtgg
     3421 cgaataaaat tgtctctgcc ccatttgcgg tgattggctc agtgggggtg gtggctcagg
     3481 tgccgaatat ccaccgctta ctgaaaaaac acgatattga tgtggatgtg atgactgcag
     3541 gtgaatataa acgcacggtg acgctggtgg gagaaaatac cgaaaaaggg aaacagaaat
     3601 tccagcaaga actggaagaa acgcactctc tgtttaagca atttgtggct cgacaccgcc
     3661 cacaactgga tattgagcag gttgcaacag gcgagcattg gtttggtcag caagcgattg
     3721 agctaaattt ggttgatgag attgcaacca gtgatgatct gctcctcaat gcaattaagg
     3781 aaaaagaagt gatcgagcta aaatataaag agaagaaaaa acttgctcag aaattgggtt
     3841 ctcaattcga gcaatcagca gagaacctgc tcgctaagat tttacataaa agtcgttcaa
     3901 cgctgatgta gcgtatatat tattaaaggg ctatcgttta tatagcccct tattttatca
     3961 gttagtaata gaatgaagta tttgttcact atttaaatga cctggaatac ttttctttaa
     4021 attgagtgaa gaatctaaca at
//
LOCUS       DANLXO010000150         4031 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.152, whole genome shotgun sequence.
ACCESSION   DANLXO010000150 DANLXO010000000
VERSION     DANLXO010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4031
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.152"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            160..465
                     /gene="cyaY"
                     /locus_tag="PXD69_002506"
     CDS             160..465
                     /gene="cyaY"
                     /locus_tag="PXD69_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HDL6284644.1"
                     /translation="MNTAQFHQAVEQVWQQIEEKIYDEGLSVDTEIQGAVCTLTFDDE
                     SQVIINKQEAMLELWLASKLGGFHFKNVEGEWVTDEGRSFWQHLEEAFARHGESVSF"
     gene            574..2373
                     /gene="recQ"
                     /locus_tag="PXD69_002507"
     CDS             574..2373
                     /gene="recQ"
                     /locus_tag="PXD69_002507"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDL6284645.1"
                     /translation="MNTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGG
                     KSLCYQVPALCLDGITLVISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQK
                     ALSGQLKLLYLSPEKVMTQGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGGL
                     RNTFPNVPLMALTATADLTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQ
                     LIKFISKQQGKSGIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQR
                     DDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDP
                     SDYAWLQKILLEEPESEQRNIKQHKLQAIGDFAESQTCRRLVLLNYFGEHRQEQCKNC
                     DICLDPPQQYDGLLDAQKVMSVIYRTGQIFGQHHIIAVLRGMNNLKIREHQHDQLSVY
                     GIGKEQSQHYWQNVVRQLIHLGLIIQNIANHSALQLTESARPFLRGEKQLQLALPRLG
                     ISATAFVQKQASHRYDKDLFARLRFLRKQIADLENIPPYIVFNDATLQEMAEFLPTSK
                     VEMLEINGVGERKFERFGQAFMSLIKEYQNNRK"
     gene            2532..3074
                     /gene="infC"
                     /locus_tag="PXD69_002508"
     CDS             2532..3074
                     /gene="infC"
                     /locus_tag="PXD69_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015871208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDL6284646.1"
                     /translation="MKPVKRVQSNRAHRLNDEIRGVKEVRLTDENGEQVGIVSLQDAL
                     NRAEEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPG
                     TDDGDYQVKLRSIIRFLEDGDKVKITVRFRGREMAHQEIGMDVLERVKADTAEIAMVE
                     SAPGKLEGRQVVMVIAPKKK"
     gene            3338..3535
                     /gene="rpmI"
                     /locus_tag="PXD69_002509"
     CDS             3338..3535
                     /gene="rpmI"
                     /locus_tag="PXD69_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDL6284647.1"
                     /translation="MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRQL
                     RHKSMVAKADQVLVVACLPYA"
     gene            3644..3997
                     /gene="rplT"
                     /locus_tag="PXD69_002510"
     CDS             3644..3997
                     /gene="rplT"
                     /locus_tag="PXD69_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009635878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDL6284648.1"
                     /translation="MARVKRGVIARARHKKVLKAAKGYYGARSRVYRVAFQAVVKAAQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGLSYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFAALVEKAKSAL"
BASE COUNT         1333 a          792 c          802 g         1104 t
ORIGIN      
        1 ctattcgttg taataatgag gataaaataa aaaatcaagc taaacttaaa aagcctaatt
       61 atttcttaac aaaaatacaa aaagaacttt acagaccatt taaacagcta aaacaaaaag
      121 tatttactac ttatataaca ttcaaataag gatacaccaa tgaacacagc acaattccac
      181 caagccgtag agcaagtatg gcaacaaatt gaagaaaaaa tttatgacga aggattatca
      241 gtcgatactg aaatccaagg agcggtctgc accttaacct ttgatgatga atcgcaagtt
      301 atcattaata aacaagaggc aatgctggaa ttatggcttg ccagcaaatt gggtggtttc
      361 cactttaaaa atgtagaagg cgaatgggta acagatgaag gtcgctcgtt ctggcaacat
      421 ttagaagaag cttttgctcg acacggagaa agcgtttctt tctaatgcct aattgttaac
      481 taagacagca ctcgtctttg atgagtgctt tattttcatt ttaaaagata ctctcagaag
      541 acgagtacta tcataagtag caaccaacta ccaatgaaca ccaccgcaat ttctgtttta
      601 aataatattt ttggctatca aaaattccga gacgggcaag aagaagttat caatgccgtg
      661 ttggaaaatc gtgattgcct cgtgattatg acaacaggcg gtggcaaatc cctttgctac
      721 caagtgccgg ctttgtgcct agacggcatc actttggtga tttcgccgct tatttcgttg
      781 atgaaagacc aggtggatca acttatcacc aacggcattg aagcagctta tcttaactcc
      841 actcaaacgc tcgaagagca gcaacttgtg gaacaaaaag ccttatccgg tcaattaaaa
      901 ttactctatc tttcccctga aaaggtaatg actcaaggct ttttccactt tatttcgcta
      961 tgtaaaatca gctttattgc ggttgatgaa gcccattgtg tttcccaatg ggggcacgat
     1021 ttccgccctg aatataccct gctaggtggc ttacgaaaca ctttcccgaa tgtgccgttg
     1081 atggcactca ccgccacggc agatctaaca acccgctccg atattctgca tcatttacgc
     1141 ttaaatagcc cacatatcta tttaggcagc tttgatcgcc ccaatattcg ctacaccgtg
     1201 caggaaaaat ttaaaccgct tgaacagctc attaaattca tcagcaaaca gcaaggcaaa
     1261 agcggtattg tttactgcaa cagtcgcaaa aaagtggaag aaatcaccga gaaactctca
     1321 gcccgtaaaa tcagcgtgat gggctatcac gccggtatga gttttgaaca gagagaacga
     1381 gtgcagaatg cctttcagcg tgatgatatt caaattgtgg ttgccactat tgcgtttggt
     1441 atggggatca acaaatccaa cgtacgtttt gtggtacatt tcgatttacc tcgctctatc
     1501 gaatcttact atcaagaaac cggacgagcc gggcgagatg atctcccttc tgaagccgtg
     1561 cttttttatg atcctagcga ttatgcttgg ttacaaaaaa tattattgga agagccggaa
     1621 agcgaacaga gaaatattaa acagcataaa ttacaggcaa ttggcgattt cgccgaatca
     1681 cagacttgcc gccgtttagt cttactcaac tactttgggg aacatcgcca agagcaatgc
     1741 aaaaactgcg atatttgttt agatccaccg caacaatacg atggcttact tgatgcccaa
     1801 aaagtgatgt cggtgattta ccgcaccggt caaattttcg gtcagcacca tattattgcg
     1861 gtattgcgag gaatgaacaa tctcaaaatt cgtgaacatc aacacgatca actttccgtt
     1921 tatggtatcg gaaaagaaca aagccaacat tattggcaaa atgtggtgcg gcaactgatt
     1981 catttagggt tgattattca aaatattgct aaccattccg ctctgcaatt aaccgaaagt
     2041 gccagaccat ttttgcgtgg agaaaagcaa cttcagcttg cattgccacg tttaggtata
     2101 tctgcgactg catttgtgca aaaacaagca agtcatcgct atgacaaaga cctattcgca
     2161 cgcttacgtt ttttacgcaa gcagatagct gacctcgaaa atattccacc ttatatcgtc
     2221 tttaacgatg ccaccttgca agaaatggca gaatttctcc cgacttcaaa agtggaaatg
     2281 ttagaaatta atggtgttgg tgaacgaaaa tttgaacgat ttgggcaagc atttatgagt
     2341 ttaatcaaag aatatcaaaa taaccgaaaa taggcagtta aataagggct ttattattgc
     2401 ataagcactg aaaatcttat agaatccgca cgtttagctg ttttttaatc acttaaaaca
     2461 agcaatctaa aatatttata cgctctcaag cggtaaaatt taagcaaaaa tttactagaa
     2521 ggaataaggc tattaaacct gtaaaacgtg ttcaatcaaa tcgtgcacat cgtcttaatg
     2581 acgaaattcg tggcgtaaaa gaagttcgct taaccgatga aaacggcgaa caagttggta
     2641 ttgtatcact tcaagatgct ctaaatagag cagaagaagc tgaattggat ttagtggaaa
     2701 tcagcccaaa tgctgaacca ccagtttgtc gtattatgaa ctatggtaag ttcatctacg
     2761 aaaaagagaa agcagcaaaa gaacaaaaga aaaaacaaaa agttgttcaa gttaaagaga
     2821 tcaaattccg tccgggaact gatgatggcg attatcaagt taaacttcgt agcattatcc
     2881 gtttcttaga agatggggat aaagtaaaaa tcacagtgcg tttccgtggt cgtgaaatgg
     2941 ctcaccaaga aatcggtatg gacgttttag aacgtgtcaa agcagatact gcagaaattg
     3001 caatggtaga gtcagcccca ggcaaattgg aaggtcgcca agttgtgatg gtgatcgcac
     3061 ctaagaagaa ataatttcga taagcacatt gttttaatgt gcttttttct tgataaagct
     3121 taaattggct tgcatagcgg ttatattttc gctaaaattc gcaagctttt ttgcctagcc
     3181 aagaaagaga aaatgctcaa caggcaaact cagcagcctg cttgactttt taacgatgaa
     3241 aatcgtatag cggagaataa gtgcttccaa gtaattttgt tcacaaaatt cgccttattt
     3301 tcataatatc taacaaacaa tgcggagttt tttaacaatg cctaaaatta aaacagtacg
     3361 tggtgctgct aagcgtttca aaaaaacagc ttccggcggt tttaaacgta aacaatctca
     3421 cttacgtcac attttgacta agaaaaccac taaacgtaaa cgtcaattac gtcacaaatc
     3481 aatggtagcg aaagctgacc aagttttagt agtagcgtgc ttaccatacg cataagcctt
     3541 ttaggttagc gtagtgtagt aaagtacgga cgtacggata gaattcttag taaaggtcgt
     3601 gatgacgacc accaatcaaa atagacaatt aggagattaa ataatggctc gtgtaaaacg
     3661 tggtgttatt gcaagagcac gccataagaa agttcttaag gctgctaaag gttattatgg
     3721 tgcacgttca cgcgtgtatc gcgttgcttt ccaagcagta gttaaagctg ctcaatatgc
     3781 ttaccgtgac cgccgtcaac gtaaacgtca attccgtcaa ttatggattg ctcgtattaa
     3841 cgcagcagct cgtcaaaacg gtttatctta cagcaaattc atcaacggct tgaaaaaagc
     3901 atctgttgaa atcgaccgta agatcttagc tgacatcgca gtatttgaca aagttgcttt
     3961 cgcagcttta gttgaaaaag caaaatctgc tctttaattt taaagaatag aaatgaggac
     4021 gcctagtgcg t
//
LOCUS       DANLXO010000151         3963 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.153, whole genome shotgun sequence.
ACCESSION   DANLXO010000151 DANLXO010000000
VERSION     DANLXO010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.153"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(66..1706)
                     /gene="pgi"
                     /locus_tag="PXD69_002511"
     CDS             complement(66..1706)
                     /gene="pgi"
                     /locus_tag="PXD69_002511"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDL6284649.1"
                     /translation="MQKINPVQTFAWNALEQHKADNLSIPQLFAEDPNRFDKYSLRFE
                     DQLLVDFSKNAINEKTLTLLRQLANECGLESAKNAMFSGKKINRTENRAVLHVALRNR
                     ANTPIAVDGKDVMPEVNAVLAKMKDFCERVISGEWKGYTGKTITDVINIGIGGSDLGP
                     YMVTEALRPYKNHLNMHFVSNVDGTHIAEVLRKVNPETTLVLVASKTFTTQETMTNAL
                     SARKWLLDSAKDESAVAKHFVALSTNAKEVEKFGIDTANMFEFWDWVGGRYSLWSAIG
                     LSIALSLGFENFEQLLAGAHAMDKHFLITPIEKNIPTTLALVGIWNNNFLGAESEAIL
                     PYDQYMHRFAAYFQQGNMESNGKFVGRDGKPVTHQTGPIIWGEPGTNGQHAFYQLIHQ
                     GTKLIPCDFIAPAQTHNPLSDHHNKLLSNFFAQTEALAFGKSKETVEKEFLDAGKTLE
                     EVAEIVPFKVFSGNKPTNSILVQKITPYSLGALIAMYEHKIFVQGVLFNIYSFDQWGV
                     ELGKQLANRILPELETDEKINSHDSSTNGLINQFKAWR"
     gene            complement(1739..1987)
                     /locus_tag="PXD69_002512"
     CDS             complement(1739..1987)
                     /locus_tag="PXD69_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HDL6284650.1"
                     /translation="MLTPKNLEAIAQQLHNALPQSLKNVGNDLDEKFKQILQAQLARL
                     DVVTREEFDVQSQVLLRTREKLTELEKRLDELTQRTDE"
     regulatory      2111..2155
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            2159..2827
                     /gene="queC"
                     /locus_tag="PXD69_002513"
     CDS             2159..2827
                     /gene="queC"
                     /locus_tag="PXD69_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDL6284651.1"
                     /translation="MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQR
                     HSIELEKARWISNDLGVKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNA
                     LFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTP
                     LMYLTKKETWALADKLGAFDYIRDHTHTCYLGVEGGCHDCPSCVLREKGLNEYLAERE
                     VSNV"
     gene            2820..3242
                     /gene="queD"
                     /locus_tag="PXD69_002514"
     CDS             2820..3242
                     /gene="queD"
                     /locus_tag="PXD69_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDL6284652.1"
                     /translation="MFKIAKEFSFDMAHMLDGHDGKCQNLHGHTYKLQVEVAGELFQE
                     GAKRGMVMDYSDLKAVVKQHILEPMDHAFIYDLQSERESQVAQLLIDLNSKVYGIPTR
                     TTAEEMAKYMFEKLEKVGLPVSLIRLWETPTSYCEYSK"
     gene            3242..3868
                     /locus_tag="PXD69_002515"
     CDS             3242..3868
                     /locus_tag="PXD69_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDL6284653.1"
                     /translation="MAELISNPRFPIVEIFESLQGEGFNTGMPAIFVRFGKCNLTCPW
                     CDTNYNQFEQWTLSDILAKVRSYSAKNVIITGGEPTIQPNLSLLLEQFKKEGYFLAIE
                     TNGLKEVPAQIDYIATSPKRMYQEKYQRRCIEFANEVRIVVDGEVQGFCEQIESQIKA
                     EHYYLSPCEVEGKMNLLETITQIGLLNQRPNKPKWQLSIQTHKIVGIE"
BASE COUNT         1187 a          740 c          841 g         1195 t
ORIGIN      
        1 ctaaaatttt agaaaaaaag catagagatt ttttacctct atgcttttta ttgtattgac
       61 tatatttaac gccaagcctt gaattggtta attaaaccat ttgtggagct gtcgtggctg
      121 ttgatttttt catcggtttc gagttcgggt aaaatgcggt ttgcaagctg tttgcctaac
      181 tccacgcccc attggtcgaa actgtaaatg ttgaacagca cgccttgcac gaagattttg
      241 tgttcataca ttgcaattaa tgcccctaag ctgtacgggg tgattttttg caccaagata
      301 gagttggtcg gtttgtttcc gctgaacact ttaaacggca cgatttcagc tacttcttcc
      361 aacgttttac ctgcatctaa aaactctttt tcaactgttt cttttgattt accgaaagct
      421 agtgcttcag tttgagcaaa gaagttagaa agcagtttgt tgtgatgatc gcttaacgga
      481 ttgtgagttt gtgccggtgc gataaaatca caaggaatta attttgtgcc ttgatgaatg
      541 agttgataga atgcgtgctg accgttagtt cccggttcgc cccaaataat cggacctgtt
      601 tggtgagtaa ccggtttgcc gtcacgcccc acaaatttac cgtttgattc catattgcct
      661 tgttggaaat aagccgcaaa gcggtgcata tattggtcgt aaggtaaaat cgcttctgat
      721 tcagcaccta agaaattgtt attccaaatg ccgactaaag ctaacgtagt tggaatgttt
      781 ttctcaatcg gcgtgattaa gaaatgctta tccattgcgt gagcaccagc aagtagctgc
      841 tcgaagttct caaaacctaa tgaaagggca atcgaaagcc cgatggcaga ccataatgag
      901 taacgaccgc caacccaatc ccagaattca aacatattag cggtatcaat accgaatttt
      961 tccacttctt tggcattggt tgaaagtgcc acgaaatgtt ttgctaccgc agattcatct
     1021 ttggcagaat caagtagcca tttgcgagct gaaagggcat tggtcatcgt ttcttgagtg
     1081 gtaaaggttt ttgaagccac taacactaac gtggtttcag gattaacttt acgcaacact
     1141 tcagcaatat gcgtgccgtc cacgttagac acaaagtgca tattaaggtg atttttataa
     1201 gggcgtaatg cctctgttac catataagga cctagatccg agccaccaat accgatattg
     1261 atcacatcag taatcgtttt gccggtatag cctttccatt cgccggaaat aacacgctcg
     1321 cagaaatctt tcattttcgc taacacggca ttcacttccg gcattacatc tttgccatcg
     1381 actgcgattg gtgtattggc acggttacgc agtgcaacgt gcaatacggc acggttttca
     1441 gtgcggttga tttttttgcc ggagaacatc gcattttttg ctgattccaa accacattca
     1501 tttgccagtt ggcgaagtaa ggttaaggtt ttttcgttga tcgcattttt tgaaaaatcg
     1561 actaataatt gatcttcaaa acggagggaa tatttgtcga aacggtttgg atcttcggca
     1621 aaaagttgag gaatagaaag gttgtctgct ttatgttgct ctaaggcatt ccaagcaaaa
     1681 gtttgcacag ggttaatttt ttgcatctga gtttccttat actaaattaa aaaatcgatt
     1741 attcatctgt tctttgagtc agttcatcaa gacgtttttc taattcggtt aatttttcac
     1801 gagtgcggag taacacttga gattgaacat caaattcttc acgagtgaca acatcaagac
     1861 gggctaattg ggcttgaagg atttgcttaa atttttcatc tagatcatta ccgacatttt
     1921 ttaagctttg cggtaaggcg ttatggagtt gttgagcaat cgcttctaag ttcttcggcg
     1981 tgagcatatt taaattcctt actataaatg agtatcccaa ttttattgaa ttttgggttt
     2041 aagagaaagc aaattctttg taaaatatca cctttcgcaa aatacaagca aaaaagaccg
     2101 cttgtatttt ttatttgtgg ttcgtaaacc tcccacacaa aaaaactaag gacacaaaat
     2161 gactcatcaa aaaccaaaag ccgttgtgat tttttccggc ggtcaagact ctaccacttg
     2221 tttattccaa gctattgctg aatttggcaa agaaaatgtg gaagtcgtta cctttcaata
     2281 tgggcaacgc cattcgattg aacttgaaaa agcacgctgg atttctaacg atttaggcgt
     2341 caaacaaacg ctgattgata cttcggtgat taaagcgatt actaccaatg cgttaatgga
     2401 taataatgct gaaattcaac aacaaggcag cacacccaat acctttgtgg atgggcgtaa
     2461 tgccttattt ctgctttata ccgccattta tgccaaaggg cagggcattc aaactatttt
     2521 taccggcgtg tgtgagaccg attttagtgg ttaccctgat tgccgagatg tatttgtaaa
     2581 atcaatgaat gtaacgctaa atttagcgat ggactataat ttcaacattc gcacgccatt
     2641 gatgtattta actaaaaaag aaacttgggc attagcagat aagctgggtg cttttgatta
     2701 tattcgagac catacccaca cctgttattt aggcgttgaa ggtggttgcc acgactgccc
     2761 gagttgcgta ttgcgagaaa aaggcttgaa tgaatattta gcagaaaggg aggtaagcaa
     2821 tgtttaaaat tgctaaagaa tttagttttg atatggctca tatgctagat ggacacgatg
     2881 gcaaatgcca aaacttacac ggacacacct acaaattgca agttgaggtg gcaggtgagc
     2941 tatttcaaga gggagctaaa agaggaatgg taatggacta ttcggatcta aaagcagtgg
     3001 taaaacaaca tattttagag ccgatggatc acgcttttat ttacgactta cagagtgagc
     3061 gtgaaagcca agtagcacaa ttattaattg atttaaactc caaggtttat ggtatcccaa
     3121 ctcgtaccac agccgaagaa atggcgaaat atatgtttga aaaattagag aaagtgggct
     3181 taccggttag cctaattcgc ttgtgggaaa cgcctacttc ttattgtgag tacagcaaat
     3241 aatggcggag ttaatttcaa accctcgttt tccgattgtt gagatctttg aaagcttaca
     3301 aggggaaggc tttaataccg gaatgccggc tatttttgta cgttttggca aatgcaacct
     3361 cacttgcccg tggtgcgata ccaattacaa tcaatttgag caatggacgt taagcgatat
     3421 tcttgccaaa gtaagaagct attctgcgaa aaatgtgatt attaccggag gcgagccaac
     3481 gattcagcct aatttatcgt tattattaga acaatttaaa aaagagggat attttttagc
     3541 gatcgaaacc aacggcttaa aagaggttcc ggcacaaatt gattatattg cgaccagccc
     3601 aaagcgaatg taccaagaaa agtatcaacg ccgttgcatt gaatttgcga atgaagtccg
     3661 tatcgtcgtt gatggagaag tacagggttt ctgtgagcaa atagaaagcc aaattaaagc
     3721 tgagcattac tatctttcac cttgtgaggt agagggaaaa atgaacttgc tggaaaccat
     3781 cacccagatt gggttattaa atcagcgtcc aaataagcct aaatggcagc taagtatcca
     3841 aacgcataaa attgtgggga ttgaataagt agaagttaga agatgatttg taaaagatca
     3901 gacttgatct gacaattcac tctaaaaagt gagagtttcc cgtttagaat atgagtgtcc
     3961 aaa
//
LOCUS       DANLXO010000152         3866 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.154, whole genome shotgun sequence.
ACCESSION   DANLXO010000152 DANLXO010000000
VERSION     DANLXO010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.154"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>3866
                     /locus_tag="PXD69_002516"
     CDS             <1..>3866
                     /locus_tag="PXD69_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDL6284654.1"
                     /translation="WEIYDLAPILSKMLGVEISFDKWALYDVARYCDQLVPDGMGGME
                     PRFTCNVWLTEVKTAYDLLNDFCSVFRAIPIWTGTEVSVIIDRPRDPVWTYTNANVVG
                     GFERSYSARKSRHNAVQVTYSDKTNGYESAIEYVSDDEEIKKHGLNLSQITAFGCTSR
                     GQAHRTGKWILETEKREKETITFTVGREGLMHLPGDIIRVADSHYAGTEIGGRVLAIN
                     GRKVTLDREISIDNASYFTYINGEATHSSKIQSVNGKEITLDSTPTGLETYGVWSLST
                     KQISSGLYRSISIVENADGTNTITALQHEPQKEAIVDNSAHFVETARTLYKAPQINAV
                     EVSTGYDGKLYITGDISSGDGKLTYDIKITKDGNLYQYKKGLSDPNIELSDLPNGDYT
                     VIIYGKNAKGQIVTEKTQTFTIDRPPAPTGVVVTGGLGQITLEWDWVNEVTQTEIFAA
                     ETDNFALAKKIAKVTARTYAHTLKGNKVVRYYWLRHTRGINVGPFYQQQGVRGQTAVD
                     LDARLTELNTQLSRNIVNEVFDVAAPARGLELVKTVANLTDKGTKLASSQVYNQADGK
                     LYTWNGTAYSATVAAEDVTGKLSKSKIDTSLISQLTGADNTANLARRLAETAQSNINQ
                     EITNRQDAVTAEANNRTKAIQAESANLTKKIQAEATARGAAVTQLQNVDAQQAQLISA
                     VTAKADNALSGLEEEKTARANADKAESQAREALTARMGAAESNIVTIQRTVANNAQSI
                     SEVSQNLNAKIDNINIGGRNLLRDSEFNAYNKWGSPQIEFAENANRRTIKVTSTGTNG
                     PVGIVSSNRHSTSYFQQGETYTLSLFARGSKALDYLYLMRQDGNNVRLPVINVASETE
                     FNHYKLTFKAPFTTQQGYVLIGFRQTSTEQFVEFHSVKLEKGNVATDWTPAPEDVESA
                     VSAVSADLTSYKQTQAATDSAQAQQLNQLSVNLTKAESNLNAKITEEKKARVDADKVN
                     ADKLTDITSRVANAESTITNFQSTKANKSEVASIAQQNLQSIWRTDAQSAVDALKIGG
                     ANLLVDSEYLTTARWGGSSRVASSQYGDRRLTQVFVTQAGTGHFGVTQGTQKATTRIR
                     QGETYTLSLNAQGTAGFTRTGLNYVYLIREDGGNFRLPTLPLTASLSQRPKVTFTAPW
                     TSNQVRLLIGANGIFEATDWFAFHSVKLEMGNVATGWTPTAKDIDDKVSAVQSNLTAY
                     QAAQAKADQAKATQISGLTTRMGAAESNLTRTERAVTELNQTTVTTLRDLTARTKTTE
                     GSLSRLETAKANKTEVASIAQSSLQS"
BASE COUNT         1220 a          834 c          888 g          924 t
ORIGIN      
        1 cttgggaaat ttacgattta gctccgattt taagcaaaat gcttggggtt gaaatcagtt
       61 ttgacaaatg ggcgttgtat gatgttgctc gctattgcga tcaacttgtg ccggacggta
      121 tgggtggaat ggagcctcgt ttcacctgta acgtatggct cacggaagtt aaaactgcct
      181 atgacttgtt gaatgatttc tgctcggtat tccgtgcgat tccgatttgg accggaacag
      241 aagtatcggt cattatcgac cgtccgcgtg atccggtttg gacttacaca aatgctaatg
      301 tagttggtgg atttgaacga tcctactctg ctcgcaaatc acgccataat gcagtgcaag
      361 ttacttattc ggataaaaca aatggctatg aaagtgcgat tgaatatgtc tctgatgacg
      421 aggaaatcaa aaagcacggc ttaaatttaa gtcaaattac tgctttcggt tgtacctctc
      481 gggggcaagc acaccgtacc ggaaaatgga ttttggaaac cgaaaaacgg gaaaaggaaa
      541 ccattacttt taccgtggga cgtgagggct taatgcactt gccgggcgat attattcgtg
      601 tggcagacag ccattatgcc ggtacggaaa ttggcggacg tgtactggcg attaatgggc
      661 gaaaagtcac gttagatcgt gaaattagca ttgataacgc cagttatttt acctatatca
      721 acggtgaggc aacgcactct agcaaaatcc aatcggtaaa cggcaaagaa attacgctgg
      781 atagtacacc aaccggctta gaaacctacg gtgtttggtc gttatcgact aaacaaatca
      841 gctctggatt atatcgctca atctcgattg tcgaaaatgc ggacggcaca aacactatca
      901 cagcgttaca acacgaaccg cagaaagagg caattgttga taactccgct cactttgtgg
      961 aaacggctag aacactctac aaagctccac aaattaacgc agtggaagtc tcgaccggtt
     1021 atgacggtaa gctctacatt accggtgata ttagctccgg tgatggcaag ctaacctatg
     1081 atattaaaat taccaaagat ggcaatttat atcaatacaa aaaaggctta agcgatccga
     1141 acattgaact aagtgattta cctaacggcg attataccgt cattatttac ggcaaaaacg
     1201 ccaaagggca aatcgtcacc gaaaaaacac aaacctttac tattgatcga cctccagctc
     1261 cgaccggtgt agtagtaaca ggtggattag ggcaaattac cctcgaatgg gattgggtaa
     1321 atgaggttac gcaaaccgag attttcgcgg ccgaaaccga taatttcgcc cttgcaaaaa
     1381 aaatcgcaaa agtgaccgct agaacctacg ctcacacact aaaaggtaac aaggttgtac
     1441 gctattattg gctacgtcat accagaggca ttaatgtcgg accgttttat caacaacagg
     1501 gggtaagagg acaaacagcg gttgatttgg atgctcgatt aaccgaatta aacactcagt
     1561 tatcacgcaa tattgttaat gaggtttttg atgttgctgc accggcaaga ggtttagaat
     1621 tagtgaaaac agtcgctaat ttgaccgaca aaggtactaa actggcgtca tctcaagttt
     1681 acaatcaggc tgacggcaag ctctatactt ggaacggtac agcatactca gctacagtgg
     1741 ctgcggaaga tgttaccggc aaattatcaa aatctaaaat tgatacgtcc cttatttcgc
     1801 aattaacagg tgcagataac accgcaaatt tggcaagaag attagcggaa acagctcaaa
     1861 gcaacattaa ccaagagatt actaaccgac aagatgccgt tactgccgaa gcaaataacc
     1921 gtactaaagc cattcaagcc gaaagtgcga atttaacgaa aaaaattcaa gctgaagcaa
     1981 ccgctcgtgg ggctgctgtt acacagttac aaaatgttga tgctcaacaa gcacagttga
     2041 tttctgctgt cacagcaaaa gctgataatg ctctttcagg cttggaagaa gaaaaaacag
     2101 cacgagcaaa cgccgataaa gcggagtctc aagcacgtga agcattaaca gcaagaatgg
     2161 gagcagctga aagcaatatc gtaactattc aacgtacggt agcaaataat gcccaaagca
     2221 ttagtgaagt cagtcagaat ttaaatgcta agattgataa tattaatatc ggcggtcgga
     2281 atttattaag agacagcgag ttcaatgcgt acaataaatg gggtagccca caaattgaat
     2341 ttgctgaaaa tgcaaatcgc cgaactatca aagtaacctc aacaggtact aacggtcctg
     2401 ttggtattgt ttcatctaat cgccattcca catcttattt ccaacaagga gaaacttata
     2461 cactctcatt atttgctcga ggaagtaagg cactagacta tctctatcta atgcgtcaag
     2521 atgggaataa cgttagatta ccagtgatta acgttgcctc tgaaactgag tttaatcatt
     2581 acaaactcac gttcaaggct ccttttacca cgcaacaagg ttatgtctta atcggttttc
     2641 ggcaaaccag cacagagcag tttgttgagt ttcacagcgt caaacttgaa aaaggcaacg
     2701 tagccacaga ctggacacca gcaccggagg atgtggagag tgcggttagt gctgtttcgg
     2761 ctgatttaac gagttataaa caaactcaag cggctaccga ttcagcacaa gcacagcaac
     2821 ttaatcagtt atctgtgaac ttgaccaaag cagagagcaa tttaaatgcc aaaatcacgg
     2881 aagaaaaaaa agctcgtgtt gatgcagata aagtgaatgc agataaactc acagacataa
     2941 caagccgtgt tgcaaatgcg gaatcaacta ttaccaattt ccaatcaacc aaagcgaata
     3001 aaagtgaggt ggcaagtatt gcccagcaga acttacagag catttggcgc accgatgcgc
     3061 aaagtgcggt ggatgccttg aaaatcggtg gtgcaaatct actggttgat agtgagtatt
     3121 tgacgacagc ccgttggggc ggtagctcac gagtggcaag ctcgcaatat ggtgatcgtc
     3181 gcttgactca agtgtttgtg acccaagcag gcacagggca ttttggtgtg actcaaggca
     3241 cacaaaaagc cactacgcgt attcgtcagg gtgaaaccta taccttgtca ctaaatgcgc
     3301 aggggacggc aggttttacc cgcacagggt taaactatgt gtaccttatc cgcgaagatg
     3361 gtggcaattt tagattgcca actttgccgc ttactgcatc attgtcccaa cgccctaaag
     3421 tgacatttac tgcgccgtgg acgagcaatc aagttcggtt actgattggc gcaaatggca
     3481 tatttgaggc gacagactgg ttcgcatttc acagcgttaa gctcgaaatg ggtaatgttg
     3541 ccacaggctg gacaccaacc gccaaggata ttgacgacaa agtatcagcg gttcagtcca
     3601 acctcaccgc ttatcaggcg gcacaagcta aagcagatca agccaaagct acgcagattt
     3661 cggggctcac aacccgaatg ggggcagcgg aaagtaacct cactcgcacc gaacgggcag
     3721 tgacggaact taatcagaca acggtgacga cactgcgtga tctaaccgcg cgcaccaaaa
     3781 caacggaagg ttcgctctct cgtttggaaa ccgccaaagc aaataaaact gaggtggcaa
     3841 gtattgctca aagctcctta cagtca
//
LOCUS       DANLXO010000153         3843 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.155, whole genome shotgun sequence.
ACCESSION   DANLXO010000153 DANLXO010000000
VERSION     DANLXO010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3843
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.155"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            32..2527
                     /locus_tag="PXD69_002517"
     CDS             32..2527
                     /locus_tag="PXD69_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HDL6284655.1"
                     /translation="MSQAVFYLNNFKELFMTVEVGGVVITADLEFENLLRDTQKVDKA
                     MDDIGKSTLKAEKGLKGLETQATKTAIAVNQATNKMKNIRGVAGQLGYQIQDISIMLQ
                     MGSNASTVIAQQGSQILSIFGPMGAVAGAILAISGAIGGALLPSLFDSTDATELLAAA
                     QKNLSEVVTQTESGVSALSAKIIKLAKVSEDAAKAKIAVAMSDAKIAIKAAGDSSQKA
                     FEQFDGFFGSFTNSSQSIRNAIDELKRYESKGKDVGAVIKELGGTYGGAIAEVNALDS
                     VTSEMSKTLGITQSEALGLIKLLAQLEQDKSPDNIKLLAIALSDLSDKNGWANEELNK
                     LTRTINDNSVSALDAETSVRLLESAIKDLQNAIQNSQGALDGNVAKMNQLADAAERKA
                     ATIGKTERETAKYAATLLATTDEAKKNLDSTLSRIDASYDQIEAYQAEQKALQDKKTA
                     DAKAAREAEAAAKKSAQAKKQVVEQLRQMATQYEIAVLRQKGMHLEAVKLEAGMRLGA
                     AATKEQREEAEKLAQSIYGATAASQNFNAIQAQASPVTALDQRHQQQLAQIEEYKILY
                     PQKIMEAEAARAAIEEQYRQQRMEAQWEEWKQASDGARMFGDAVDAVGSSATSTITGL
                     LNGTMSVRDAFASIANTILNSVVQSLVEMGMAQVKQMIMGQTAAKASMAAQMVQAKAL
                     AASFAPAASMVSLATQGANAIPAQAAITSTMSMAQVAAVTGRKLGGPVSARQMYRVGE
                     NNQPEIFKASNGMQYMIPGQSGRVFSNKQSQGQGGGESKTVAVIVNQTNHFSSDEASA
                     NQAAVAKALSNQIKASVRLELQSQMRAGGVLAR"
     gene            2531..2860
                     /locus_tag="PXD69_002518"
     CDS             2531..2860
                     /locus_tag="PXD69_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284656.1"
                     /translation="MQTFNFKVEQDYTVQNEPSVVILKFADGYEQTAPKGLNHNLKKY
                     QGITVKANKAEAVKIQQFLNAHGGYKKFNWRDRTSDETVTVRCRSWSSTKLGAVIEFT
                     LNFDEVI"
     gene            2860..3330
                     /locus_tag="PXD69_002519"
     CDS             2860..3330
                     /locus_tag="PXD69_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL6284657.1"
                     /translation="MPKAPPKKMASELIKLEQDALIELWEIDLTHIYSSSNPNQRGEI
                     FRFHNGVSQTQQNIWWQGNEYQAYPIAADGFEISGQGPSNRPTLTVSNLYGVVTVLVE
                     DFGQPVEAKVSSEETVDGNIQMTVELLKKMDQIADQRYRRNQLNDLRTGGTLSK"
     gene            3338..>3843
                     /locus_tag="PXD69_002520"
     CDS             3338..>3843
                     /locus_tag="PXD69_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL6284658.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRKLQDKNGNAGSVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEATGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLSSLTRETATFTLA
                     LPIETDNA"
BASE COUNT         1280 a          771 c          894 g          898 t
ORIGIN      
        1 taaaaaaatc acagaaataa ccgcttgtgc tatgtcacaa gcggtttttt atttaaataa
       61 ttttaaggaa ttgtttatga cggtcgaagt tggcggagtt gtaattaccg cagatctaga
      121 atttgaaaat ctgctaagag atactcaaaa agttgataaa gcgatggatg acatcggaaa
      181 atcaacatta aaagcagaaa aagggctgaa agggctagaa acgcaggcaa ccaaaacggc
      241 gatagcagta aatcaagcca caaacaaaat gaaaaatatc cgtggagtag caggtcaact
      301 tggttatcaa attcaagaca tctcaataat gcttcaaatg ggttctaacg cttcaaccgt
      361 tattgctcag caagggtcgc aaatcttaag tattttcggt ccaatgggag ctgttgcagg
      421 ggcgatctta gctattagtg gtgctattgg tggggcgtta ctccctagtt tgtttgattc
      481 aactgatgca actgagcttt tggcagcagc tcaaaaaaat ctcagcgaag tagttactca
      541 aacggaaagt ggtgtttccg ccctttctgc gaaaatcatt aaattagcaa aagtaagcga
      601 agatgcagca aaagcaaaaa ttgcagtagc tatgagtgat gcaaaaatag ctattaaggc
      661 agcaggggat tcatcacaaa aggcatttga gcaatttgac ggcttttttg gatcgtttac
      721 aaattcaagt caaagtattc ggaacgcaat tgacgaatta aaacgctatg aatcaaaagg
      781 taaagatgtt ggtgccgtaa taaaagaact tggaggcaca tatggtggtg caattgccga
      841 agttaatgcg ctggattctg tgacaagcga aatgtctaaa acgcttggta ttactcaatc
      901 tgaggctctt ggtttgataa aactgttggc tcaattagag caagacaaaa gccctgataa
      961 tattaaatta ctcgcgatag ctttatctga cttaagcgat aaaaatgggt gggcgaacga
     1021 agagctaaat aagctaacca gaacgataaa cgataattca gtatctgctt tagatgccga
     1081 aacatcagta agactcttag agtctgctat aaaagacttg caaaatgcaa tccaaaactc
     1141 ccaaggtgca ttggatggca atgtagcaaa aatgaatcaa cttgcagatg cggcagaaag
     1201 aaaagctgca acgataggca agactgagcg tgaaactgct aaatatgcag ctacgctatt
     1261 agctacaacc gatgaagcta aaaaaaatct tgattccaca ttaagtagga ttgacgcatc
     1321 atacgatcaa atcgaagcct atcaagccga acaaaaagcc ttacaagata aaaagaccgc
     1381 agatgcaaaa gctgccagag aagctgaagc ggctgcaaaa aaatccgctc aagccaagaa
     1441 gcaagttgtc gaacagttgc gacaaatggc tacacagtac gagattgctg ttttgaggca
     1501 aaagggaatg catctcgaag ccgtaaaatt agaagctggt atgcgtttag gagctgcggc
     1561 aacaaaagag caacgagaag aagctgaaaa actagcacaa agtatttatg gagcaaccgc
     1621 agcaagtcag aactttaacg ctatacaagc ccaagcatct cctgttactg cattagacca
     1681 acgacatcaa caacagctag ctcagatcga agaatataaa atcttgtatc cacaaaaaat
     1741 aatggaagca gaagctgcga gagctgcaat cgaagaacaa taccgccagc aacgaatgga
     1801 agctcaatgg gaggagtgga agcaagcgag cgacggggcg agaatgtttg gtgatgcggt
     1861 tgatgctgtt ggttcaagtg caacaagcac aattacgggg ctactaaatg gcacaatgtc
     1921 cgtgcgtgat gctttcgcat caattgcaaa tacgatctta aatagtgtag tacaaagcct
     1981 tgtcgaaatg ggtatggctc aagttaagca aatgattatg gggcaaactg ctgccaaggc
     2041 ttctatggcg gcgcaaatgg tgcaagctaa agcgttagct gcttcatttg cacccgcggc
     2101 ctctatggtt tctcttgcca cacagggggc gaatgctatt cccgctcaag ctgcgatcac
     2161 gtcaactatg agtatggctc aagtcgccgc ggtgacaggt cgtaaacttg gcggccctgt
     2221 atcagctaga cagatgtatc gtgtcggcga gaacaatcag cccgaaatct tcaaagcgag
     2281 caatgggatg caatatatga tccccggtca aagcggtcgt gtattcagca acaagcagtc
     2341 gcaaggtcaa ggtggaggcg aaagcaaaac agtagctgtc atcgtaaatc aaaccaatca
     2401 ctttagcagc gatgaagcca gtgcaaatca agcggctgtt gcaaaagcat tgagcaatca
     2461 aatcaaggct tccgtgagat tggaattgca gtcacaaatg cgagctggtg gagttctagc
     2521 gaggtaatca atgcaaacat ttaatttcaa ggttgagcaa gactacactg ttcaaaatga
     2581 gcccagtgtc gtcatactaa aatttgccga tggttacgag caaaccgctc ccaaagggtt
     2641 aaaccacaat ctgaaaaaat accaaggcat taccgtaaaa gcgaacaaag cagaagcggt
     2701 gaagattcag caatttctca atgctcacgg tgggtataag aaattcaact ggcgcgatag
     2761 aacaagcgat gagacggtaa cggttcgttg cagaagctgg agctccacta aattaggtgc
     2821 agtcattgag tttacactta atttcgatga ggtgatttaa tgccaaaagc cccccccaaa
     2881 aaaatggcat cagagttgat aaaactcgaa caagatgccc tgattgagct gtgggagata
     2941 gatctcactc acatctactc tagctcaaac ccaaatcagc gcggagagat attccgcttt
     3001 cacaatggcg tgagccaaac acaacagaac atctggtggc aaggcaatga ataccaagca
     3061 tacccgattg ccgccgatgg ttttgagatt tcgggtcaag gaccgtcaaa tcgtccaaca
     3121 ctcactgtct ctaacctgta cggtgttgtc acggtattag tagaagattt cgggcaaccc
     3181 gtagaggcga aagtcagcag tgaagagact gtagatggca atatccaaat gacggtggaa
     3241 ctgctgaaaa aaatggatca aatcgccgat caacgctacc gtagaaatca gttaaatgat
     3301 ttaagaacag gtggaacatt atctaaatag gtgaagtatg ccaattagta tttctaacca
     3361 aatgaaacta gatcttgcca aacttgagca aaatgcaatg ctggacttgt acgaggttga
     3421 tttgcgtaaa ttgcaagaca aaaacggcaa tgctggtagt gtttaccgct tttattctgg
     3481 gctaaatgaa ctcaaaacaa gtattgtctg gcaaggtcga acttacgacc cttaccccat
     3541 cgaggcaaca ggatttgagc gtaacagcag cggcccaagc aatcgcccta ctcttacgct
     3601 atcaaatctg tttggcttag ttacgggtat tgctaatcag tttgacgaat gtatcggtgc
     3661 gattgttcgc cgtcatcagg tttacgccca atatttagat gcagtaaact ttgctggagg
     3721 taatgccaaa gccgatccta atcaggaaat catcagccat tttgtgattg agcaactttc
     3781 aagcctcaca cgagagactg ctacttttac gcttgcgttg ccgattgaaa ccgataatgc
     3841 caa
//
LOCUS       DANLXO010000154         3796 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.156, whole genome shotgun sequence.
ACCESSION   DANLXO010000154 DANLXO010000000
VERSION     DANLXO010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3796
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.156"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            7..792
                     /locus_tag="PXD69_002521"
     CDS             7..792
                     /locus_tag="PXD69_002521"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005716895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDL6284659.1"
                     /translation="MPLETDHDVSVWAARYIVDRINAFQPTKEKPFVLGLPTGGTPEK
                     TYKELIKLYQAGEVSFKNVVTFNMDEYVGLPKEHPESYHSFMFKHFFDHVDIPLENIN
                     ILNGMAEDVNAECERYEEKIRFYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIKTLT
                     EDTRIANSRFFNNDVSQVPKFALTVGVGTLLDAEEVMILVTGHNKALALQACVEGAVN
                     HLWTISCLQLHRRGIVVCDEPATQELKVKTVKYFKELEKNVAR"
     gene            873..2015
                     /gene="nagA"
                     /locus_tag="PXD69_002522"
     CDS             873..2015
                     /gene="nagA"
                     /locus_tag="PXD69_002522"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDL6284660.1"
                     /translation="MNHYALTNCVIYTGEQVLYQHALVVKEDKIDSIVLEENLPLDLQ
                     KIDLKGANLSAGFIDLQLNGCGGVMFNEEITTRTLEIMQETNLRSGTTSYLPTFITSP
                     DEGVKQAVAVMREYLSKHKNQALGLHLEGPYLSVAKKGVHRPEFIREISPEMLDFLCD
                     NGDVITKITIAAENPTADHIKRFNDAGIIVSIGHSNATFAQTKQRIAEGAAFATHLHN
                     AMSPVSNGREGGVVGAVLDSDIYTGIICDGLHVEWGNIRIAKKAKGDKLVIVSDAVAA
                     AGSDIESFIFVGKKVTVKDGKCYDEFGALGGAAITMIESIRNVVQHCDISLNEAIRMS
                     TLYPAKAIGVEETLGSLEAGKIANLAIFDNQFEVKATAVNGQLQWH"
     gene            2097..2411
                     /locus_tag="PXD69_002523"
     CDS             2097..2411
                     /locus_tag="PXD69_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HDL6284661.1"
                     /translation="MQFKDYLATFPTIDHLAGLNVINSGEVIQHIPAIEGKLGSLKLY
                     NALFAKFDGKLTASAAKQGLEWFAEHVEDAKNNVGKHPNIDLLFRVIEQDLSLSLEPI
                     VK"
     gene            complement(2490..3680)
                     /locus_tag="PXD69_002524"
     CDS             complement(2490..3680)
                     /locus_tag="PXD69_002524"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDL6284662.1"
                     /translation="MTQAIESVLAELKRGVENIYSEEDLITKLKENRPLRIKLGADPT
                     APDIHLGHTVVLNKLRQFQQFGHEVYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNA
                     ETYKEQIFKILDPQKTKIVFNSEWLGKLGTEGMIRLASNYTVARMLEREDFKNRFTNQ
                     QPIAIHEFIYPLLQGHDSVELKADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPL
                     LVGLDGEKKMSKSLGNYIGVTEAPSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLK
                     ADVENGKNPRDVKILLAKEIIARFHDEAAADAAEQEFINRFQKGAIPDEVPEFTFEGE
                     IGLAALLKEAGLVPSTSEAIRSAQQGGVKIDGEKVEDVKQTAQKGTFVYQVGKRKFAR
                     ITVK"
BASE COUNT         1093 a          733 c          861 g         1109 t
ORIGIN      
        1 cgtttaattc cgttagaaac tgatcacgat gtgagtgttt gggctgctcg ttatattgtt
       61 gatcgtatca atgcattcca accaaccaaa gaaaaacctt ttgtgcttgg cttaccaacc
      121 ggcggtacgc ctgaaaaaac ctataaagaa ttaattaaat tatatcaagc tggtgaagtg
      181 agctttaaaa atgtggtgac tttcaatatg gacgaatacg tcggcttacc taaggaacac
      241 cctgaaagct accacagttt tatgttcaag cacttttttg accacgttga tattccgctt
      301 gagaatatca atatcctcaa cggtatggcg gaagacgtga atgcagaatg cgaacgttat
      361 gaagaaaaaa tccgttttta tggtaaaatc catctgttta tgggtggggt cggtgtggat
      421 gggcatattg cgtttaatga gcctgcatct tcgctttctt cccgcactcg aattaaaacg
      481 cttaccgaag atactcgcat tgcaaactca cgtttcttta acaatgacgt aagccaagtg
      541 ccgaaatttg ctttaaccgt tggggttggt acgttgcttg atgccgaaga agtgatgatc
      601 ttagtgaccg gccataacaa agccttagca ttacaggcgt gtgtggaagg ggcggtaaat
      661 catctttgga ccatcagttg cttacaatta catcgccgtg gtatagtggt gtgtgatgag
      721 ccggcaaccc aagagctgaa agttaaaaca gttaagtatt tcaaagagtt agagaaaaac
      781 gtagctcgct aattctgatt ttacaagcgg ttaattttgt aatatttttt acaaaaacga
      841 ccgcctgtta gcatttaaag agaagagaga aaatgaacca ttatgcctta acaaactgtg
      901 tgatttacac cggtgaacaa gtgctttacc aacacgcatt agtggtgaaa gaagataaaa
      961 tcgactccat tgttttggaa gaaaatttac cgctggatct gcaaaaaatc gacctaaaag
     1021 gagcgaatct ttcagccggt tttattgact tgcaactgaa cggctgcggt ggggtgatgt
     1081 ttaatgaaga aatcactacc cgcactttag aaattatgca ggaaaccaat ctgcgttcag
     1141 gcacaaccag ctatttaccg acttttatta cctcgcctga tgagggagtg aaacaagcgg
     1201 tggcggtaat gcgtgagtat ttgtcgaaac acaaaaacca agcactcggc ttgcatttgg
     1261 aaggacctta tctaagtgtg gcaaagaaag gagtacaccg tccggaattt atccgtgaaa
     1321 tcagccctga aatgttagat ttcttatgcg ataacggcga tgtaattacg aaaatcacga
     1381 ttgcagcaga aaacccgacc gcagaccata tcaaacgctt taatgatgca ggaattattg
     1441 tatctatcgg gcattccaat gccacttttg ctcaaaccaa acagcgaatt gccgaagggg
     1501 cagcgtttgc tacgcattta cacaatgcaa tgtcgccggt cagcaacggg cgtgaaggcg
     1561 gtgtagtagg ggcggtgttg gatagcgata tttacaccgg cattatttgc gatggcttgc
     1621 acgttgaatg gggcaacatt cgcattgcca aaaaagccaa aggcgataaa ttagtgattg
     1681 tcagcgatgc tgttgctgcc gcaggaagtg atattgagtc gtttattttt gtcggtaaaa
     1741 aagtcacggt gaaagatggc aaatgctacg atgaattcgg agcattgggc ggtgcggcaa
     1801 tcacgatgat cgaatccatt cgcaacgtag tgcaacattg cgatattagc ctgaatgaag
     1861 caatccgaat gagtaccctt tacccggcaa aagcgattgg ggtagaggaa acactcggct
     1921 cacttgaagc cggcaaaatt gccaaccttg cgattttcga taatcaattt gaagtaaaag
     1981 cgactgctgt aaacgggcaa ttacagtggc attaattttg ctacaaattc taagcataac
     2041 agcatataat ccaaaggcag gcattgtgtc tgccttttat ttatagggag aataacatgc
     2101 aatttaaaga ttacttagcc acttttccaa ctattgatca tctagccggc ttaaacgtga
     2161 taaatagcgg tgaagtgatt caacatattc ctgcgattga aggtaaatta ggttcactaa
     2221 aactttacaa tgcactgttt gcgaaatttg atgggaaatt aaccgctagt gcagcaaaac
     2281 aagggttgga atggtttgcc gaacacgttg aagatgcgaa aaataatgtg ggtaagcacc
     2341 cgaatattga tctattattt agggtaattg agcaagattt atctttaagt ttagagccga
     2401 ttgttaaata agattgcact agtgaaaaat aacaagcggt cattatctgc aaaatttttg
     2461 caaataatga ctgcttgtgt ttaagaggct tatttcacgg taatgcgtgc aaatttgcgt
     2521 ttgccgactt ggtaaacaaa agtgcctttt tgagcagttt gtttcacatc ttccactttt
     2581 tcaccatcaa ttttaacccc gccttgttgg gctgagcgaa ttgcctctga agtggacggt
     2641 actaagccgg cttctttcag tagagccgct aggccgattt caccctcaaa ggtaaattca
     2701 ggcacttcat caggaattgc ccctttttgg aaacggttga taaactcttg ctctgctgca
     2761 tctgctgccg cttcatcgtg gaaacgagcg ataatttctt ttgccagtag aattttcaca
     2821 tcacgcgggt ttttgccatt ttcaacatcc gcttttaatt gtgcaatttc gtctaatgga
     2881 cggaatgaga gcaggttgta ccaatcccac attaaatcgt ctgaaatcga cataattttg
     2941 ccgaacattt cgcttggagc ttcagttaca ccaatgtagt tgccgagaga tttcgacatt
     3001 tttttctcgc cgtctaagcc gacaagtagt gggagtgtca ttgccacttg tggtttttga
     3061 ccggctgatt tttgtaactc acgtccaact aacaagttaa aggtttggtc tgtaccacct
     3121 aattccacgt cagctttcag ttctaccgag tcgtgacctt gtagtagcgg ataaataaat
     3181 tcgtggattg cgatcggttg ttggttcgtg aaacggtttt tgaaatcttc acgttctaac
     3241 attcgagcaa cggtgtagtt ggaggctaag cggatcatac cttccgtacc taacttgcct
     3301 aaccattcgg agttgaatac gatcttggtt ttttgtggat ctaaaatttt gaagatctgc
     3361 tctttatagg tttcggcatt gcgtaacacg tcttcacggc taagtggcgg acgggtagag
     3421 ttttttcctg atggatcgcc taccataccg gtgaaatcac cgattaagaa atagacttcg
     3481 tgtccgaatt gttggaattg acgaagtttg ttcagcacaa cagtatgacc taagtgaata
     3541 tccggtgcag ttgggtctgc ccctaattta atacgcaatg ggcggttttc ttttaatttg
     3601 gtgattaaat cttcttctga ataaatattt tccacgccac gtttaagttc ggcaaggact
     3661 gattcgatag cttgagtcat ttatcttcct tttagtcttg aatataaaaa atggatctat
     3721 tatagcggta tgaattgaaa ttgataggct ataggcgaaa aaaaacgccg tattttgtgg
     3781 gggaatacgg cgtaaa
//
LOCUS       DANLXO010000155         3775 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.157, whole genome shotgun sequence.
ACCESSION   DANLXO010000155 DANLXO010000000
VERSION     DANLXO010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3775
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.157"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..707
                     /locus_tag="PXD69_002525"
     CDS             <1..707
                     /locus_tag="PXD69_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284663.1"
                     /translation="GDKDSYFKNLNQKGDKHLGIHSGVYEDANLEGNTKKINYLYVNQ
                     PYSSYGALFTDQKDSHLFNVRLTAGRENGDSYAEYGVFTQSGKEAKWNDNLIGDATYK
                     GQAIARVIRQVNGEQVAGIPQFDGDVTLNLHLSKEWNESKLNGKIDSQSVGVITLKES
                     EIANPTALRSNIGFGEEVIVENKENLVGDYAVDFTGPQLEEAVGVVELENEAETFSEN
                     EVIKYNAVFGVSKAAK"
     gene            771..2183
                     /locus_tag="PXD69_002526"
     CDS             771..2183
                     /locus_tag="PXD69_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6284664.1"
                     /translation="MKKIALLALFPMMLFARDPNTTQAYIEHTAQPTTTPQRVKIEKS
                     VPIFNETELRANQLLTEKLLIQAIYSRRLANMEKLTAIYRDFTHIDPVLLRYAQGKIA
                     LLKGDYAQAIQHFQTILAKQPKLNTVRIELAIALLYDQQLNQAQAQFEKAKSAEHLPP
                     KVHALIEQYQQHLAKKQEWKFSFSANYVRDGNINRTSKQPNIEQTGYVKQPNLLPQTA
                     HGVHYAFGLQRDFNLFDSHYVSFDNQTQGELYWDNHDYDEITNRTLFGYAYKKSDQTT
                     RLLPFYEKRWKHHRSERWTNGIRLEHAQWFSPHWQLATALEYGKKRYFDLPIYNGSYK
                     LASATLLWLRNPQQFFFVGTDFNQDKTQLKQYSSDTKGIRFGWQREWQALELSSRLTL
                     GYTDRRYKDTAILGGKLNLGRIRHDRVQSANLTLWKRDWHWLGLMPKLQFSYAKHRSN
                     LPSLYAYTDKNINLIIESRF"
     gene            complement(2433..2756)
                     /locus_tag="PXD69_002527"
     CDS             complement(2433..2756)
                     /locus_tag="PXD69_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin"
                     /protein_id="HDL6284665.1"
                     /translation="MQKAYQIYTHSEREKVTEAKLELGKVETRLRNEGKTKEEIAQHP
                     EYLQLKRDLNDKQQTFDNAYGTGSKTKRAVDAVTAALQGLAAKDSGQAAVGLASPYLN
                     EQIKK"
     gene            complement(2725..3252)
                     /locus_tag="PXD69_002528"
     CDS             complement(2725..3252)
                     /locus_tag="PXD69_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL6284666.1"
                     /translation="MRDKNKERQQTLERYQELYDQDPELRVIAANSEGDLDLLQETFF
                     VKGELTITDSTPKEKWNWLHMCNLNSYSPSPLSVVEFYIKHGVDVNAQDCYGMTPLHY
                     AMRAKNVDAAIALLNAGADPNIENKDQVIPLSMIGAVPKEIELIEHDISEVKETQELV
                     KGIGEIAEGLSDLHA"
     gene            complement(3254..3466)
                     /locus_tag="PXD69_002529"
     CDS             complement(3254..3466)
                     /locus_tag="PXD69_002529"
                     /inference="COORDINATES: protein motif:HMM:NF025767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH/ENDO VII family nuclease"
                     /protein_id="HDL6284667.1"
                     /translation="MYCWEHRRLSLAAKELNWSQKQFNDYVNARPENFRLENISENRS
                     HKNEMPGKDNIKSIIDDMKKFQQIGK"
     gene            complement(3481..3765)
                     /locus_tag="PXD69_002530"
     CDS             complement(3481..3765)
                     /locus_tag="PXD69_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL6284668.1"
                     /translation="MTPLHYAMRAKNVDAAIALLNAGADPNIPNQDNLIPLSMIGYLP
                     DRLDVLELMLEKGANVHFLVNKNETILESYKPTEMEPNLAPIYELMLKYA"
BASE COUNT         1134 a          811 c          676 g         1154 t
ORIGIN      
        1 ccggagataa agattcttat tttaagaact taaatcaaaa aggggataaa catttaggta
       61 ttcatagtgg cgtgtatgaa gatgcgaatt tagaaggtaa tactaaaaaa attaactatc
      121 tctatgtaaa tcaaccttat tcgagctatg gtgctttatt tacggaccaa aaagacagcc
      181 atttattcaa cgttcgtctg accgctggta gagaaaatgg agatagttat gccgaatatg
      241 gtgtattcac acaatcagga aaagaagcta aatggaatga taacctgatt ggtgatgcca
      301 cttacaaagg tcaagctatt gctcgcgtta ttcgtcaggt aaatggggaa caagtcgcag
      361 gtattcctca atttgatggt gatgttacat taaatttaca cctttccaaa gaatggaatg
      421 aaagtaaact aaacggcaaa attgatagcc aaagtgttgg ggtaattaca cttaaagaaa
      481 gtgaaatagc taaccctacc gcactccgct caaatattgg ttttggagaa gaagtcatag
      541 ttgagaataa agagaatctt gtgggtgatt acgctgtcga ttttaccggg cctcagcttg
      601 aagaggcggt aggcgttgtt gaattagaaa acgaagccga gacattctct gaaaatgaag
      661 tcattaaata caatgcggta tttggcgtaa gcaaagcggc gaaatagtat tttttgtatc
      721 ttacaaaggg ctgttaagcc cttttatttt tattatttta aggataaaaa atgaaaaaaa
      781 ttgccttact ggcacttttc ccaatgatgt tatttgcccg agatcctaat actacacagg
      841 cttatattga gcatactgca cagccaacta caacccccca aagggtcaag atcgaaaaat
      901 cagtgcctat ttttaacgaa actgaattac gtgctaatca attattgacc gaaaagctac
      961 ttatccaagc tatttatagt cgtaggcttg ctaacatgga aaaattaact gcgatttatc
     1021 gggattttac ccacattgac ccggttttac tgcgttatgc acaaggtaaa attgccctac
     1081 tgaaaggcga ttacgcacag gcaattcagc acttccaaac cattcttgcc aaacaaccca
     1141 aactaaacac tgtaagaatt gagctggcga ttgctctatt gtacgatcag caacttaatc
     1201 aagcccaagc acaatttgaa aaagccaaaa gtgccgaaca tctaccgcct aaagttcacg
     1261 cattaattga gcaatatcag caacatctgg caaaaaaaca ggaatggaaa tttagttttt
     1321 cagccaatta tgtgcgagac ggcaacatta accgaacctc gaaacagccg aacattgagc
     1381 aaaccggcta tgtaaaacaa cctaatttgt tgccccaaac cgcacatggt gttcactatg
     1441 cgtttggatt acagagagat ttcaacctgt tcgactcaca ctatgtgagt tttgacaacc
     1501 aaacccaagg tgaactttat tgggataacc acgattatga tgaaattacc aatcgcacct
     1561 tgtttggata cgcttacaaa aaatccgacc aaaccacccg cttgttaccg ttttatgaaa
     1621 aacgctggaa acatcaccgt tcggaacgct ggacaaacgg aattcgactt gaacacgcac
     1681 aatggttttc accgcattgg caactcgcca ccgcattgga atacggcaaa aaacgttatt
     1741 ttgatttgcc gatttataac ggcagctaca aacttgcctc tgccacattg ctttggttac
     1801 gcaatccaca acaatttttc tttgtcggca ctgatttcaa tcaagacaaa actcagttaa
     1861 aacaatatag ctctgatact aaaggcatac gctttggctg gcaacgagaa tggcaagccc
     1921 tcgagctttc cagtcgcctc acgcttggct atactgacag acgttacaaa gacaccgcta
     1981 tattgggagg aaaacttaat cttggcagaa tccgccatga ccgtgtgcaa agtgctaacc
     2041 tcacgctttg gaaacgagat tggcactggc tcggcctgat gccgaagctg caatttagtt
     2101 acgccaaaca ccgtagcaac ctgccgagcc tctatgccta caccgataaa aacatcaatt
     2161 taattattga aagtcggttc tagctccata aaaacaacaa gcggttaaaa ttcctagaaa
     2221 ttttgcaaat tgcaaaaaat gtagaaaatt taaccgcttg tatctatact gcagcttctt
     2281 ttccttcagt ataaattaat atacaccgtt gcaacaataa tggctgctcc ctgtcatcac
     2341 cttgaactga aaattgctca aggtggatat gactatcgca gccgcttcca ccgcacccag
     2401 taatgtatgg gcaagcaggt tggcttgggt atctactttt taatttgttc gttgagatat
     2461 ggcgaagcta agcctactgc tgcttgtcct gaatctttcg ccgctaaacc ttgtaaggct
     2521 gccgtcaccg catccaccgc acgcttggtt ttgctgcccg tgccgtaggc gttatcaaaa
     2581 gtctgctgtt tatcgtttaa atcccgtttt aattggagat attcaggatg ttgagcgatt
     2641 tcttcttttg tttttccctc atttctcaaa cgggtttcca ctttgcccaa ttccagcttc
     2701 gcttccgtca ctttttcacg ctcactatgc gtgtaaatct gataagcctt ctgcaatctc
     2761 gcctatgccc ttcaccagct cctgtgtttc tttcacctca ctaatatcgt gttctattaa
     2821 ctctatctct ttaggaactg ctccaatcat agacaatgga ataacttgat ctttattttc
     2881 aatattcgga tctgcccccg catttaataa tgctatcgct gcatcaacat tctttgccct
     2941 cattgcataa tgtaaagggg tcattccgta gcaatcttgg gcattaacat ctaccccatg
     3001 tttaatgtaa aattcgacta cagaaagagg agatggtgaa taactattta agttacacat
     3061 atgtagccag ttccattttt cttttggtgt gctatccgta atagtcagtt caccttttac
     3121 gaaaaatgtt tcttgtaaaa gatcgagatc gccttctgag tttgctgcaa taactcttaa
     3181 ttcaggatct tgatcatata attcttgata acgttctaat gtctgctgac gttctttatt
     3241 cttatctctc attttacttt cctatttgtt ggaatttttt catgtcatcg attattgatt
     3301 taatattatc tttccccggc atctcattct tatgactccg attttcagat atattttcta
     3361 atctgaaatt ctccggtctc gcattaacat aatcattaaa ttgtttttga ctccaattta
     3421 attcttttgc cgctaatgat aatcggcgat gttcccagca atatatattc tatgcatgca
     3481 ctaagcatat ttcagcatta gttcatatat aggtgctaaa ttaggctcca tctctgttgg
     3541 tttatagctt tccaatatcg tttcattttt attaactaaa aaatgtacat tcgcaccttt
     3601 ctctaacata agttctaaaa catctaatct atcaggtaaa taccctatca ttgataaagg
     3661 tattaaatta tcttgatttg gaatattcgg atctgccccc gcatttaata atgctatcgc
     3721 tgcatcaaca ttctttgccc tcattgcata atgtaaaggg gtcattccgt agcaa
//
LOCUS       DANLXO010000156         3673 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.158, whole genome shotgun sequence.
ACCESSION   DANLXO010000156 DANLXO010000000
VERSION     DANLXO010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.158"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            79..225
                     /locus_tag="PXD69_002531"
     CDS             79..225
                     /locus_tag="PXD69_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284669.1"
                     /translation="MDTTQKRVALFIIGLSVVMWLRKHNCCTVIFVLLLAALAFSYTM
                     EHLY"
     gene            241..447
                     /locus_tag="PXD69_002532"
     CDS             241..447
                     /locus_tag="PXD69_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284670.1"
                     /translation="MVKNVVHEEILHNRAELQQAVEKEEFCAKCDNSVVFHLRDNYHE
                     FTLGLDTILQCLHFAEEKGAIRIP"
     gene            444..1220
                     /locus_tag="PXD69_002533"
     CDS             444..1220
                     /locus_tag="PXD69_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284671.1"
                     /translation="MNIEYSLNHCQGDGVAFYGRLGTDDLIQLFNHLNPQKRKQKMFA
                     NLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMELYAKTADQLVFFNDSDARRNWYF
                     PTSKVYKYKGLWDEFIQDLEQYIKGTSREMESVGYQIIEASPYQTETVFKFNTENYLV
                     ELKRKPSEFYSELVDWAFGDMCDFEATIEQICQGQLCYADFEATVTDKKSEIQLGLAR
                     LSGISYSPNDRSFSGYRQELIGEAIASARHNAARFAYLHA"
     gene            1335..1747
                     /locus_tag="PXD69_002534"
                     /pseudo
     CDS             1335..1747
                     /locus_tag="PXD69_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
     gene            1761..1916
                     /locus_tag="PXD69_002535"
     CDS             1761..1916
                     /locus_tag="PXD69_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284672.1"
                     /translation="METRIVKVIYDDGDYFFTRINADEQAIRNYYAIGSSIGFDDIRK
                     IIAVEIL"
     gene            1996..2970
                     /locus_tag="PXD69_002536"
     CDS             1996..2970
                     /locus_tag="PXD69_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL6284673.1"
                     /translation="MNTQPKFDLYQHITDRIVVALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDE
                     REKLDEEGNIVYDEEGNPEMERHFFINKHNLFNLDQCENLPVELYDPVSEPKQPKSEP
                     NQYDIFAEIRQIIKGMDLQVEMKPSNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHE
                     MTHATGANNRLNREGITSGKAKFGNKVYAFEELIAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVLKEDKRAIVRASGKAREACQYMLDALNVAQLADKYDVFEEAA"
     gene            3057..3254
                     /locus_tag="PXD69_002537"
     CDS             3057..3254
                     /locus_tag="PXD69_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284674.1"
                     /translation="MTKSTEIPRGHDNWVITGRDNDGKWHKERFLYYSRREAIQQFRR
                     KHNCVGKHSVIESITPQFGWY"
     gene            3331..3573
                     /locus_tag="PXD69_002538"
     CDS             3331..3573
                     /locus_tag="PXD69_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284675.1"
                     /translation="MFNLNLFKRPIELSTLESWSKFCDDVGKVAFIAIPPMIYSNYDL
                     CIKIGNISALLAITYGFLLSGRTIRQFIEKEKSRWD"
BASE COUNT         1142 a          638 c          805 g         1088 t
ORIGIN      
        1 ggcgatattt ttgaagcagt cggcggagat aagctgaaag gtgccaaaaa atggcagcct
       61 tacaagaaag aatgacagat ggatacgaca caaaaacgtg tggctttatt catcattgga
      121 ttatctgttg tgatgtggct aagaaagcat aactgctgta cagtgatatt tgtattgttg
      181 ttggcagcgt tagcatttag ctacacgatg gaacatttat attagctggg gaactgaatt
      241 atggtaaaga atgtggttca tgaagagata ttacataacc gtgcagaatt acagcaagcg
      301 gttgaaaaag aagaattttg tgcaaaatgt gataactcag tagtattcca tttacgtgat
      361 aattatcacg aatttacgct tgggttagat actatattgc agtgtctgca ttttgctgaa
      421 gagaagggag ctatccggat accttgaata ttgagtattc actcaatcat tgccaaggag
      481 atggagtcgc attttatggt cgacttggta cagatgatct aatccagctt ttcaatcatc
      541 tcaatccaca gaaacgtaaa cagaaaatgt ttgctaattt gctaacgcac attgagtctt
      601 gggaaaccca cgatgatatt ggttttgaaa ttatacgaaa tcgctttggg tatcgttact
      661 cgcattggaa tacgatggag ctttatgcta aaactgcaga tcagttagtg tttttcaatg
      721 atagtgatgc tcgaagaaac tggtattttc cgacttcaaa agtgtataaa tacaaaggct
      781 tgtgggatga gtttattcag gatttagaac agtatattaa gggtacttcc cgtgaaatgg
      841 aatcggtcgg ttatcaaatt attgaagcct cgccgtatca aacggaaacc gttttcaaat
      901 ttaatacgga aaactatcta gtagaactga aacgtaaacc ttctgagttt tattcagagc
      961 ttgttgattg ggcatttggt gatatgtgtg attttgaagc aactatagag cagatttgtc
     1021 aagggcaact ctgttatgct gattttgaag caactgttac cgataagaaa agtgaaattc
     1081 agttaggtct tgctcgcttg agtggaataa gttactcgcc gaatgaccgt tcgtttagtg
     1141 gttatcgaca agagcttatt ggtgaggcga ttgcctctgc tcgccataat gcagcacgtt
     1201 ttgcctactt gcacgcctaa tttgcagatt tgtacttcaa tttgaccgct tgtagtggtt
     1261 aattttcacc ccgtggggaa atattttccc tattgggcaa gatgtttctc cactttttaa
     1321 tttggagaaa tgtgatgaaa aatgaacaca atttagagca acttaaatat atttgggata
     1381 accgcaacct tgaaaataaa gcctatcaat acctgtttca catttgcatt gagccgatga
     1441 aaaaaggaga ttggaatcgt tatacgattt ggcttaattt tcacggcaac ttaatcaacg
     1501 tgtcagacgt tgtatatcga gttgtggaat ctcaaaagct caaggatgac atcaaaatgt
     1561 ggtatgacaa taataccatt gtcgtccgat aaaagttgaa acaacaggct tcatctcata
     1621 tttactgcac cagttctatc aggggatagc ctatatttta ctggaacagg gaatgattac
     1681 tgaaactgaa gcagccgaga aaagttataa cttcagagct gcaaattgtt ttcaacgttt
     1741 gctttaatgg aggtgagata atggaaactc gcattgttaa agttatttac gatgatggtg
     1801 attatttctt tacccgaatc aatgctgatg aacaggctat ccgtaattac tacgccatag
     1861 gcagttcaat aggttttgat gatataagaa aaattatcgc tgttgaaatt ttataaacca
     1921 cccatagggg aaactatttc cccatagggt gatagcgttt ccccattttt ctacccgaac
     1981 tttggagaaa cacttatgaa cactcaacct aaatttgatt tataccaaca catcactgac
     2041 cgaattgttg tagcactgga acaaggtaca gccccgtggt taaaaccgtg gagccatccg
     2101 gaatgcaata tggcattacc tcgcaatgcg gtatctaacc gcttgtattc cggtatcaat
     2161 acactcttac tctggattgc tactgctgaa catggttaca aacagtgcaa gtggattaca
     2221 gcaaaaaaag ccaatgaact cggcggatat atccgtaaag gggaaaaagc tactgtggtg
     2281 atgaactacc gtcctgatga gagagagaaa ctcgatgagg aagggaatat tgtgtatgac
     2341 gaggaaggaa atccggaaat ggaacgacac tttttcatta ataagcacaa tctgttcaat
     2401 ctggaccagt gtgaaaattt accggtggaa ctgtacgatc ctgtatcaga accgaaacaa
     2461 cctaaatctg agccaaacca atacgatatt tttgctgaga ttcggcagat tatcaaagga
     2521 atggatttgc aggtggaaat gaagcctagc aatcgggcat tttatcaacc aggtgaagat
     2581 aaggtcgtaa tgccggagat gaagcagttt gcaaatgctc aagcgtttca tagtgtattg
     2641 ttacacgaaa tgactcacgc aacgggggca aataatcggc ttaatcggga aggtattact
     2701 tccggaaagg ctaaatttgg aaacaaagtc tatgcttttg aggagttgat tgctgaaatg
     2761 ggcggtgcat ttttatgtgc ctaccttggt tttgatactg tgcctcaaaa tgcggcgtat
     2821 attgaaagtt ggattcgagt attgaaagaa gataaacggg cgattgtccg tgcttccgga
     2881 aaagctcgtg aagcctgcca atacatgtta gacgcattaa acgtcgcaca gttggctgac
     2941 aaatacgatg tatttgaaga agctgcttaa caaatttgcc gaaaggcata tctcaagggg
     3001 agacctatcc ctttgggcat agtgtttccc tattttttat taaatggaga aaagctatga
     3061 caaaatcaac tgaaatacct cgtggacatg ataactgggt tattacaggc agagacaatg
     3121 atgggaaatg gcataaagaa cgttttcttt attattctcg ccgtgaagcc atccaacagt
     3181 ttcgtcgaaa acacaactgc gtaggtaaac atagtgttat tgaatcaata acacctcaat
     3241 ttggctggta ttaaccggct ttcccgtggg gagatactct cccttcggag cattgtgtct
     3301 ccctttttat tcacttaact agaggacaca atgttcaatc taaacttatt taaacgccct
     3361 attgagcttt caacgcttga atcttggtct aaattctgtg atgatgtcgg taaagttgca
     3421 tttattgcga tacctccgat gatttatagt aattatgatc tatgtatcaa aataggaaac
     3481 ataagtgctt tattggcaat tacctatgga ttcttattat caggcaggac tatccgtcaa
     3541 tttattgaga aggagaaatc aagatgggat taacaatcgg cttatggatc attgctttta
     3601 taggctttgc actggttttt tgggcaaata gcttactcaa agagcaagat gaacgcctta
     3661 aacagctaaa aaa
//
LOCUS       DANLXO010000157         3617 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.159, whole genome shotgun sequence.
ACCESSION   DANLXO010000157 DANLXO010000000
VERSION     DANLXO010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.159"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1154)
                     /locus_tag="PXD69_002539"
     CDS             complement(<1..1154)
                     /locus_tag="PXD69_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3880 domain-containing protein"
                     /protein_id="HDL6284676.1"
                     /translation="MKKKQQYRKSTINNTNASQQNSGEVLNSVNYQTLLEDYLNKISF
                     SNRQFIDELKTEHNKKLKELENKVSSLEQTNHVQQQDISRLNILLEQKNIEENRNLER
                     MISYQLGYALINACKSFSGFISLPSELLKIRKLAKDKKQQKLLPSSPVANTPKQQTAL
                     VTSAPARSQSIDLTRGLTLLDPISELCWADAFTGYPLVRKSYADHIAGSTCKFAFFES
                     AWQANKGSWIYAFTSPGLKHNNAQALLDAIQKLKDKSIPIIFWNKEDPMHYEMFKPIA
                     EKVDYVFTTDQLVVDKYKKELGHSNIWALPFAAPIKVTNPIGRFSLDTETVCFAGTYY
                     AQNHENRKKQMDMLLPALLAYNGCIYDRASKDTSGKYAYPEQYTHLIREGV"
     gene            complement(1158..2429)
                     /gene="wecC"
                     /locus_tag="PXD69_002540"
     CDS             complement(1158..2429)
                     /gene="wecC"
                     /locus_tag="PXD69_002540"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL6284677.1"
                     /translation="MSNFNTISVVGLGYIGLPTATVFAQHGLNVIGVDVNQHAVDHIN
                     QGKIHIVEPDLDVAVHQCVSSGKLKATLTPEPAEAFLIAVPTPFKGEDYEPDLSYIQA
                     ACKAIAPVLEKGNLVILESTSPVGATEQMAEWLAEYRPELSFPQQAGEDSDIRIAHCP
                     ERVLPGQVMHELIENDRIVGGMTNKCSVQAVNLYKTFVKGDCIVTNARTAEMCKLTEN
                     SFRDVNIAFANELSIICDRLDINVWELIALANRHPRVNILQPGCGVGGHCIAVDPWFI
                     VNKTPDLAKIIRTAREVNDHKPEWVISKMNEAVIYALQKTGKSIDQIKIACLGLAFKP
                     DIDDLRESPALKITEKLAEKYPNQVFAVEPNVEELPKKLANKNISLISVDEALEVADV
                     VVVLVDHSEFKLVKPVFLNDICVVDTKGIWR"
     gene            complement(2444..3559)
                     /gene="wecB"
                     /locus_tag="PXD69_002541"
     CDS             complement(2444..3559)
                     /gene="wecB"
                     /locus_tag="PXD69_002541"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015703970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDL6284678.1"
                     /translation="MRYLIVFGTRPEAIKMAPLVEGFKKSGLNFKVCVTAQHRQMLDQ
                     VLELFEITPDYDLDIMSNKQTLSTVTSAILEKIQPVIAEYKPTTIFVHGDTATTLASS
                     LAAYYNQIDIAHIEAGLRTHNIYSPWPEEGNRKLTAALAKYHFAPTQSTKKNLLNENI
                     AEGTIYVTGNTVIDALFLACKKLDENIDLLSSLQEKFSYIKSKRTILITGHRRENFGN
                     GFENICKAVSTLASDFPDVQFIYPVHLNPNVREPVNRLLADKSNVHLIEPCDYLSFVY
                     LMRESYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGTVKLVGTAQSEIIKQV
                     TELLNDQAAYTKMSEAHNPYGDGTAVKQILSVFQSKQ"
BASE COUNT         1069 a          686 c          659 g         1203 t
ORIGIN      
        1 accccttctc ggataagatg agtgtattgt tcaggataag catatttgcc acttgtatct
       61 ttagatgctc tatcataaat acagccgttg taagccaata atgcaggtaa caacatatcc
      121 atctgttttt tacgattttc atgattttga gcataatatg ttccagcaaa acaaactgtt
      181 tctgtatcaa gagaaaatct gccaattgga ttggttactt taattggggc agcaaaaggc
      241 aaagcccaaa tatttgaatg cccaagttct tttttatatt tatctacaac caattgatct
      301 gttgtaaaaa cataatctac tttttctgcg attggcttaa acatctcata atgcattgga
      361 tcttctttat tccaaaaaat gataggaatg cttttatctt ttagtttctg aattgcatct
      421 aacaatgctt gagcattatt atgttttaag cctggtgaag taaaagcata gatccatgac
      481 cctttatttg cctgccaagc actttcaaaa aaagcaaatt tacacgtgct gccagcaata
      541 tgatcagcat aagattttct aactaaagga taccctgtaa aggcatctgc ccagcataat
      601 tcagaaatag gatccagtag tgtcaatcct cttgtcaagt caatagattg agatcgggca
      661 ggtgcacttg taactaatgc agtctgttgc tttggtgtat ttgcaacagg ggaagatggc
      721 aataatttct gctgtttctt atccttagct aacttcctga tttttaataa ttctgaaggc
      781 aaggatataa aaccactaaa tgatttacaa gcgtttatta aagcatatcc taactgataa
      841 gaaatcattc tttcaagatt tctattttct tcaatgttct tttgctctaa caaaatattt
      901 aatctggata tgtcttgctg ttgaacatga ttagtttgct caaggctgct tactttattt
      961 tctagctcct tgagcttttt attatgctca gttttcagct catctataaa ctgccgatta
     1021 ctaaaactaa ttttatttaa ataatcttcc agtaatgttt gataattgac agaatttaat
     1081 acttcgcctg aattttgttg tgatgcatta gtattgttaa tagtggattt acgatattgc
     1141 tgtttctttt tcatcactta tctccaaatt cctttagtat ccaccacaca aatatcattc
     1201 aaaaacacag gtttgactag tttaaattcg ctatgatcca ccaaaacaac tacaacatca
     1261 gctacttcca gagcttcatc aacagaaatc aaagaaatgt tcttgttagc caattttttc
     1321 ggtagctctt caacattcgg ctcaactgca aatacttgat ttggatactt ttccgccaat
     1381 ttttcagtaa tttttaatgc cggactttca cgcaaatcgt caatatcagg cttgaatgcc
     1441 aaccctaaac aagcaatttt gatttgatcg atagatttac ctgttttttg taaggcataa
     1501 attaccgctt cattcatctt tgagataacc cattcaggtt tatgatcgtt tacctcacga
     1561 gcagtgcgga taatttttgc caagtcagga gttttattca caataaacca aggatctaca
     1621 gcaatgcagt gtccacctac accacaaccc ggttgtaaga tattgactcg agggtgtctg
     1681 ttagccaaag caattagttc ccatacatta atatctaggc gatcacaaat aatagaaagc
     1741 tcatttgcaa aagcgatatt gacatcacgg aaactatttt cggttaattt acacatttct
     1801 gcggtacggg cattggtaac tatacagtcg ccttttacaa aagttttgta taaattgacc
     1861 gcttgcacag agcatttatt tgtcatacca cccacaatac ggtcgttttc aatcaattca
     1921 tgcatcactt gtcctggtag aactcgttct gggcaatggg cgatacgaat atcagaatct
     1981 tcacctgctt gctgagggaa gcttagctct ggacggtact cggcaagcca ctcagccatc
     2041 tgttctgttg caccaaccgg agaggttgat tctaaaatga ctaaattacc tttttccagc
     2101 acaggtgcaa ttgctttgca agcagcttga atataactta aatcaggctc ataatcctcg
     2161 cctttaaaag gcgttggtac agcaattaaa aatgcttctg ctggttcagg tgtcagtgtg
     2221 gcttttaatt ttccgctaga tacacattgg tgaacagcaa catctaaatc aggctcgaca
     2281 atgtgaattt tcccttgatt gatatggtct acggcgtgct gattaacatc tacgccaatt
     2341 acatttagac cgtgttgggc aaatacagtg gcggttggta agccaatata gcctaagcct
     2401 actactgaaa tggtattaaa gttcgacata catttatccc ttattattgt tttgattgaa
     2461 atactgagag aatttgtttc acagctgtgc catcgccata agggttgtga gcctcagaca
     2521 tttttgtata agcagcttga tcattgagta actcagtaac ttgtttaata atttcagatt
     2581 gtgcagttcc aacaagtttt actgttccgg cttctacagc ttccggtctt tctgttgtgt
     2641 ctctcattac taataccggt tttcctaatg atggggcttc ttcttgaata cctccggagt
     2701 cagttaagat aaggtaagac tctctcatta aataaacaaa ggagagatag tcgcaaggct
     2761 caatgagatg cacattggat ttatccgcta ataggcgatt gaccggttct cttacatttg
     2821 ggttgaggtg tacggggtag ataaattgaa cgtcagggaa atcagacgct aatgttgaaa
     2881 cggctttaca gatgttctca aaaccattac cgaaattttc gcggcgatgt ccggtgatca
     2941 aaatagtacg cttacttttt atataagaaa atttctcttg tagcgagctt aataaatcaa
     3001 tattttcatc taattttttg caagcgagga ataaggcatc aattaccgta ttacccgtta
     3061 cataaatggt gccctcagca atattttcgt tgagtagatt tttcttggtg ctttgtgttg
     3121 gtgcgaaatg gtattttgcc aaagcagctg ttaatttgcg attgccttct tccggccaag
     3181 gagagtagat attatgcgtt cttagacctg cctcaatatg agcgatatca atttggttgt
     3241 aataggctgc taatgaagag gcaagagtgg ttgctgtatc gccatgaaca aaaatagtag
     3301 ttggtttgta ttcggcaata acaggttgaa ttttttctaa aatagcagaa gttacagtag
     3361 aaagtgtttg cttattgctc ataatatcca ggtcataatc tggagtaatt tcgaataatt
     3421 ctaaaacttg gtccagcatt tggcggtgct gagcagtaac acagacttta aaatttagac
     3481 cgcttttctt aaagccctca actaagggag ccattttgat tgcctcagga cgagtaccga
     3541 agacgatgag atagcgcatt tattactcct ttaaaaatat agataaaact aaaatacact
     3601 agatgtaagt aattttg
//
LOCUS       DANLXO010000158         3405 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.160, whole genome shotgun sequence.
ACCESSION   DANLXO010000158 DANLXO010000000
VERSION     DANLXO010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.160"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            58..846
                     /locus_tag="PXD69_002542"
     CDS             58..846
                     /locus_tag="PXD69_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284679.1"
                     /translation="MFLSHFKQVLNANIEADGKDWTIIDVFGGSGLLAHTAKREKPLA
                     RVIYNDFDNYAERLNHIKETNQLRQEIYQIVDEIIPKNKRISNEIKAKIINKINDFEG
                     FKDLKCLSSWLLFSGEQVATLDELFKHDFWHCVRQSDYPEATGYLDDIEVVSESFHQL
                     LPRFHDKEKVLLILDPPYLCTRQESYKQENYFDLIDFLRLIDLTKPPYIFFSSTKSEF
                     IRFIHYMVQNRKENWQAFEGAERIVVNASASYNGKYEDNMVYKF"
     gene            complement(883..3321)
                     /locus_tag="PXD69_002543"
     CDS             complement(883..3321)
                     /locus_tag="PXD69_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family igA-specific metalloendopeptidase"
                     /protein_id="HDL6284680.1"
                     /translation="MKHTFKLSLLATSIAISLSPTLLASIVRGDVDYQYFRDLAENKG
                     KFFVGATNIPVIDKTGKNIGTFLQVTPTKQVEVESNISPKPNVSLSECFDNESLPGCY
                     EFLYGGGDEDSNDLPVFETVTGETMSIPMIDFSSITRQTGIATLVNPQYVISVNHNQG
                     YRDIQFGDSSSEKADDHHYNYSVVRRNNYMPDPNKERTDLGKGIEKRERNDEGEKLIL
                     DGSGNPTPRWDYHAPRLSKLVTEVAPANEIERTTENVQDFYSVFSDPFIFPMFIRAGS
                     GRQAVVNNERDRLNNGRIEVGNGPFLTGGSVLPVTNGDPSVPGSDFNSRILVAKTENN
                     TINDVFKDHGYGPLTTLGLPGDSGSALFGYDVRTKKWVVLGVYSDYFSENNTLGGDVY
                     KSYWNYHHPHYVRALEKENNAGAINANGARLTWTPSGNTSSIVGGNAPLTVNLADTSL
                     PTLQGHNGNTGDNPWNPQLQHGKTFHILGENNTLSLTENINQGAGAIHFHGNTTVEGM
                     KAGITWLGAGVDIDKDKNVIWKISNPAGDRLSKIGQGTLTINGKGENKGSVSVGDGTV
                     ILNQQADENNKKSAFSELGIVSGRPTVILNSSDQMDPNNIYFGYRGGRLDVNGNDLTF
                     RRIQNSDEGAMVVNHNTAQTANITLTGIVSPTIDQVKVQAITSPDQVSRHLDKDIFTY
                     QRFPHLPTNFIRLKKPLSVAEITAIFNARKVFIDLDFATGLIRENEYFEVLKVTDESA
                     AKQQILAEKIKAAEGTVQGFNGYFGETDPSKTNGRLNITMNSNCSEPTKLRNATTKTT
                     KENRSFTFLILMVF"
BASE COUNT         1015 a          628 c          669 g         1093 t
ORIGIN      
        1 tgtgagatag agaaagtatt taaacaagct cctttaccct tttcagggca aaaacggatg
       61 tttttatccc atttcaaaca ggtgttaaat gcaaatattg aagcagacgg gaaagattgg
      121 actattatag atgtttttgg tgggagtggg ttgcttgcac ataccgcaaa gcgtgagaaa
      181 ccgttagcaa gagtgattta taatgatttt gataattacg ccgaacggct aaaccatatc
      241 aaagagacaa atcaacttcg ccaagaaatc taccaaattg ttgatgaaat tataccaaaa
      301 aataagagaa ttagcaatga aattaaagct aaaatcatca ataaaatcaa tgattttgag
      361 gggtttaaag acctcaaatg cttaagttct tggttattgt ttagcggtga gcaagttgca
      421 actttagatg agttatttaa gcacgatttt tggcactgtg tgcggcaaag tgactatcct
      481 gaagcaacgg gttatcttga tgatattgag gtggttagtg agtcctttca tcaattattg
      541 ccgagatttc acgacaaaga gaaagtatta ttgattcttg acccacctta tctttgcaca
      601 agacaggaaa gctataagca ggaaaattac tttgatttaa ttgatttctt acggttgata
      661 gaccttacta aaccacctta tatcttcttt agctcaacca aaagcgagtt tattcgcttt
      721 attcactata tggttcaaaa cagaaaagaa aactggcaag cgtttgaggg agcggaaaga
      781 atagtggtta atgcctcggc aagttataac ggcaaatatg aggataatat ggtgtataag
      841 ttctaaaaat ttaaacgccc tttgatagtg atttaaaggg cgttaaaaaa ccattaaaat
      901 taagaaagta aagctcctgt tttctttcgt agttttcgtg gttgcgtttc gcagttttgt
      961 tggctcgcta caattactgt tcattgtaat gtttaatcga ccattggttt tgctaggatc
     1021 agtttcacca aaataaccgt taaaaccttg gacggtgcct tctgctgctt tgattttttc
     1081 agcaagtatt tgttgctttg cagcactttc atctgttacc ttgagtactt caaagtattc
     1141 gttttcacga atgagaccag tagcaaagtc taaatcgatg aaaactttac gcgcattaaa
     1201 aatagctgtg atctctgcaa cgcttaaagg ttttttcaaa cggataaaat tagttggcaa
     1261 gtgtggaaaa cgttgatatg tgaaaatatc tttgtccaaa tgacgagaaa cctgatctgg
     1321 actagtaatt gcttgaactt tcacttggtc aattgttgga ctaactatgc cggttagtgt
     1381 aatgtttgct gtttgggctg tattatgatt gacaaccatc gctccttcat cgctattctg
     1441 aatacggcgg aacgtgagat cattgccgtt gacatctaag cgcccaccac gataaccaaa
     1501 atagatattg ttaggatcca tttgatctga tgaattgagg attacggtag gtctgccact
     1561 cacaatacct agctctgaaa atgcagattt tttgttattt tcatccgctt gttgatttaa
     1621 tataacagtg ccgtcaccaa cgctaacgga gcctttgttt tctcctttgc cgttgatagt
     1681 tagtgtccct tgtccgattt ttgataatct gtcaccagca gggttactga ttttccagat
     1741 cacattttta tctttatcaa tatcaacacc ggctcctaac caagtaatgc ctgctttcat
     1801 accttccaca gtggtattac catgaaaatg gattgctcct gcaccttggt tgatattctc
     1861 tgtgagactt agcgtattgt tttcacccaa aatatggaat gttttaccgt gttggagttg
     1921 aggattccaa gggttatcgc ctgtattacc attatgacct tgaagtgttg gtaatgaagt
     1981 atctgctaaa ttaactgtaa gaggagcatt ccctcctacg attgagctgg tattgccaga
     2041 aggtgtccaa gtgagtctag caccatttgc attaatagcg cctgcattat tttctttttc
     2101 taaagcacgt acataatgtg ggtggtgata gttccagtaa gatttataaa catctccccc
     2161 aagcgtatta ttctctgaga aatagtcact atatacacct aacacaaccc attttttggt
     2221 acgaacatca taaccaaaaa gagcggagcc actatcgcca ggtaaaccga gagttgttaa
     2281 gggaccgtag ccgtggtctt taaatacatc gtttatggta ttattttcag tttttgctac
     2341 taaaatacgg ctgttaaaat cgctgcctgg aacgcttgga tcgccattag taacaggcag
     2401 aacgctacct cctgtcaaaa aaggaccgtt accgacttca atacgcccgt tgtttaagcg
     2461 atctctttcg ttgttaacca ctgcttgtct accagaaccg gcacgaataa acatggggaa
     2521 aataaaaggg tcgctaaata cactataaaa atcttgtaca ttttcggtag tgcgttcaat
     2581 ctcattagct ggagcgactt cagttactaa tttcgataac ctaggtgcgt ggtagtccca
     2641 gcggggcgtt gggttacctg aaccatctaa aatcagtttt tctccttcgt cattacgttc
     2701 acgtttttct atgcctttcc cgagatctgt tctttcttta tttggatcag gcatatagtt
     2761 attacggcgc accacactat aattgtaatg atggtcgtcg gctttttcgc tagatgaatc
     2821 accaaattga atgtcccgat agccttggtt gtggtttaca ctaataacgt attgtggatt
     2881 aactaatgtt gcaatccctg tttgacgagt aatggaagag aagtcaatca ttggaataga
     2941 catagtctca cctgttactg tttcaaaaac aggtagatca ttagagtctt catcacctcc
     3001 accatagaga aattcataac aaccgggtaa actttcatta tcaaagcatt cagataggct
     3061 tacattcggc ttaggtgaaa tatttgattc cacttcaacc tgcttagttg gtgtaacctg
     3121 taaaaaagta ccgatgtttt tgcccgtttt atcaataact ggaatattgg ttgccccaac
     3181 aaaaaatttg cctttatttt ctgctaaatc acgaaaatat tgataatcga catcaccacg
     3241 tacaatagat gccagtaatg ttggtgaaag agaaatagca attgatgttg ctagaagaga
     3301 gagcttgaaa gtatgcttca ttattatttg aaacctgtat aaatatgtaa gtagatcaga
     3361 tttgagcgct attaaaaaga ttatttaaat cgattaaata ttcat
//
LOCUS       DANLXO010000159         3371 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.161, whole genome shotgun sequence.
ACCESSION   DANLXO010000159 DANLXO010000000
VERSION     DANLXO010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.161"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            41..2131
                     /locus_tag="PXD69_002544"
     CDS             41..2131
                     /locus_tag="PXD69_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDL6284681.1"
                     /translation="MLSYLVFFSKIIKIPNLKGFLPHCEIRRRPLVGKTFIAQKRPNQ
                     IIGWGLRPSAVGSRAYAQKHQLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDT
                     TCPSRLEKLLLEKPLQDQEQIKLAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLV
                     IDQTFGDMAVKYGQASEVDFNKMLETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQ
                     YTDRVRIITEDVNPASLIKLCEKVYCVTSQMGFEALLLGKKVVTFGVPWFAGWGVTDD
                     RNEAVQLLVQQNRRKDRSLLQLFYAAYFDYSRYINPNTGEKGSIFDVIDYLYKAKRLN
                     QRLSGNLYCIGMSLWKQAVIKPFFNLPQCRLHFVRSLNSLKKRPLADNAKILVWSNGK
                     ADVLQFAQQNNIPLLRMEDGFIRSVGLGANLVAPLSLVVDDLGIYFNAENTSRLEQIL
                     LSAEHFSETDLSYAETLRQKLVASHIGKYNVGGGDVKFNAQGKKIILVPGQVEDDASI
                     KSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDVVSGNRVGQIPTAETRRFADQMVDN
                     ANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGLPFYAGWGLTEDRLKSARRGKSL
                     TLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQQKRNLTNQRIKRSWVSKQYGKL
                     QHLYRAFKYASHTK"
     gene            2154..>3371
                     /locus_tag="PXD69_002545"
     CDS             2154..>3371
                     /locus_tag="PXD69_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL6284682.1"
                     /translation="MEHYLDELIINSQRILLLQGPIGSFFTEFARWLESEQKEVFKLN
                     FNGGDEYFYPNNSPNTFPYYDSLDNFEAYLIQFCQTHQIDNILCFGDNRYYHKVAKNV
                     CLKLKLVFWAFEEGYFRPEYITLEKWGVNAFSPIPKNHTFFLPYAELPVVSEPEKVSK
                     GFRCMAGKAIPYYWNAYKKRKAYAKYQHHRFLNLKYYLNLWTRSGIKRICYWLHDKGF
                     AKRVEKGEFGEFFIVPLQVYDDTQVRIHSEQKSVERFLREVLNSFAKFAPAHLNLIIK
                     HHPMDRGFIDYKMVIYEFLEQYPQLNGRVFYIHDVPLPVFLRYGKGMVTLNSTSGLSA
                     LLHNMPVKTLGRANYDFEGLTDKQPLDTFWANPQPPNSEVFKGYRQFHLHKTHINGNF
                     YHKSILRYPYNWEN"
BASE COUNT         1077 a          541 c          691 g         1062 t
ORIGIN      
        1 atggtacaat acataaatac gaatatgaga ttaatttttt atgcttagct atttagtgtt
       61 ttttagtaaa attataaaaa tccctaattt aaaaggtttt ttacctcatt gtgaaattag
      121 gcgaagacct cttgtgggaa aaacctttat tgctcaaaaa agaccgaacc aaatcatcgg
      181 ctgggggctt cgtccttcag cggtgggatc aagagcttat gcacaaaaac atcaacttcc
      241 ctatattgca ttagaagacg gctttttacg ctcactaggg ctgggtgtaa aaggctatcc
      301 gccattttct ttagtttatg atgatatagg tatttattac gataccacct gtccttctcg
      361 tttagaaaag ttattgcttg aaaaaccttt acaggatcaa gagcaaatca agcttgcaga
      421 gagagcatta tctcaaatct taacttacgg actttctaaa tataatcacg cactagattt
      481 tagtgaaatc ccctctgcca aagaaaaaat cgtgttagtt attgaccaaa cctttggtga
      541 tatggcggtg aaatatggtc aagcgagtga agtggatttc aataaaatgt tggaaacggc
      601 aatcagtgag aatccagagg ctcaaatttg ggtaaaaact caccccgatg tattaagtgg
      661 caagaagaaa ggctatttga ccgatttacc tcaatatact gatagggtca gaattattac
      721 tgaagatgtg aatccggcaa gtttgattaa attgtgtgag aaagtctatt gcgtaacttc
      781 gcaaatgggg tttgaggcat tattattagg taaaaaagtg gttacctttg gtgtaccgtg
      841 gtttgccggt tggggggtaa cagatgatcg taacgaagcg gttcaactat tagttcaaca
      901 aaatagacgg aaagatcgtt cattactgca acttttttat gctgcgtatt ttgattacag
      961 ccgttatatt aatccgaata ccggtgagaa aggctctatt tttgatgtca tcgattatct
     1021 atataaagcc aaaagattaa atcagcgctt aagtgggaat ctatactgta ttggtatgtc
     1081 gctatggaaa caggcggtaa ttaagccgtt ttttaatttg ccacaatgtc gattacattt
     1141 tgttcgttcg ctaaattctt taaaaaaacg accgcttgca gataatgcaa aaattttagt
     1201 ttggagcaat ggcaaagcgg atgtcttgca atttgcacag cagaataata ttccattgtt
     1261 aagaatggaa gatggattca ttcgctctgt cggactaggc gctaatttag ttgcaccgct
     1321 ttctttagta gtcgatgatt taggcattta ttttaatgca gagaacactt cacgattaga
     1381 acaaatttta ttgagtgcag agcatttttc tgaaactgat ttgtcttatg ctgaaacatt
     1441 aaggcagaaa ttggtggcta gccatattgg aaaatataat gtgggcggtg gcgatgtaaa
     1501 atttaatgct caaggtaaaa aaataattct tgtaccgggg caggtagaag atgacgcttc
     1561 gatcaaatca ggttctccac aaattaaaag aaatctggat ttactgaaaa aagtgaggga
     1621 attaaaccct agtgcctata ttatttataa gcctcaccct gatgtggtaa gtggtaatcg
     1681 agtcggtcag attcctacgg cagaaacacg caggtttgcg gatcagatgg tggataatgc
     1741 caatatttta gattgtattt taattgcaga tgaagtgcat acaatgacat ctttagccgg
     1801 tttcgaagca ttattaagag gtaaaaaagt gcattgctac ggattacctt tttatgctgg
     1861 ttggggattg acggaagata gattgaagtc ggcacgcaga ggtaaatctt tgacattatc
     1921 tcagttaatt gccgcaacat tgatatatta ccctctgtat gttgatccta taagcaggca
     1981 gtttattgat gccaatcaag cgattcatat attgtcacaa cagaaacgaa acctaaccaa
     2041 tcaaaggatt aaacgttctt gggtgagtaa acaatatgga aaattacagc atctttatcg
     2101 tgcgtttaaa tatgcttccc acactaaata agcgtagagg gtaggaaatt aagatggaac
     2161 attatttaga tgagctaatc atcaatagcc agagaatttt attgttacaa ggcccgatag
     2221 gctctttttt cactgagttt gcccgttggt tagaaagtga gcaaaaagag gtcttcaagt
     2281 taaattttaa tggcggagat gaatatttct atccaaataa tagcccgaat acttttcctt
     2341 actatgatag cttagataat tttgaagcct atttaattca gttttgccaa actcatcaaa
     2401 tagataatat cttatgtttt ggcgataatc gttattatca taaagtggct aaaaacgttt
     2461 gcttgaagtt aaagttggtc ttttgggcgt ttgaagaagg gtactttagg ccagaatata
     2521 ttacgttgga aaaatggggt gtaaatgctt tttctccaat ccctaaaaat cacactttct
     2581 ttttgcctta tgccgagtta ccagtagtca gtgaaccaga aaaagtatct aaaggcttta
     2641 gatgtatggc gggaaaagca atcccgtact attggaatgc ctataaaaaa cgtaaagcat
     2701 acgcaaaata tcagcatcat cgttttctga atctcaaata ctaccttaat ttatggacaa
     2761 ggtcgggaat taagcgaata tgttattggt tacatgataa aggctttgcc aagcgggtag
     2821 aaaaaggaga gtttggtgaa tttttcattg tgcctctaca agtttatgat gacactcaag
     2881 tgaggattca tagtgaacaa aaaagtgtag agcgtttttt aagggaagtt ctgaattcct
     2941 ttgccaaatt tgcaccggca catctcaatt taattattaa gcatcacccg atggatagag
     3001 gatttataga ttataaaatg gtgatttatg aattcttaga gcaatatccc caattaaacg
     3061 gtagagtttt ttatattcac gatgtgccgt tacctgtctt tttacgttat gggaaaggaa
     3121 tggtgacttt aaattcaacc agtgggcttt ctgcattgct ccataatatg ccggtcaaaa
     3181 ccttaggtag agccaattat gattttgagg gattaaccga taaacagcca ttagatactt
     3241 tttgggctaa tcctcagcca cctaattcgg aagtatttaa aggctacaga caatttcatt
     3301 tacataaaac gcatattaac ggtaattttt accataaatc gattttgcgt tatccttata
     3361 attgggaaaa t
//
LOCUS       DANLXO010000160         3299 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.162, whole genome shotgun sequence.
ACCESSION   DANLXO010000160 DANLXO010000000
VERSION     DANLXO010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3299
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.162"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(77..781)
                     /locus_tag="PXD69_002546"
     CDS             complement(77..781)
                     /locus_tag="PXD69_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HDL6284683.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     gene            complement(872..1699)
                     /locus_tag="PXD69_002547"
     CDS             complement(872..1699)
                     /locus_tag="PXD69_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_034033256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-2"
                     /protein_id="HDL6284684.1"
                     /translation="MAIRIFAILFSIFSLATFAHAQEGTLERSDWRKFFSEFQAKGTI
                     VVADERQADRAMLVFDPVRSKKRYSPASTFKIPHTLFALDAGAVRDEFQIFRWDGVNR
                     GFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYGNADPSTSNGDYWI
                     EGSLAISAQEQIAFLRKLYRNELPFRVEHQRLVKDLMIVEAGRNWILRAKTGWEGRMG
                     WWVGWVEWPTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIEALPPNPAVNSDAAR"
     gene            complement(1776..2567)
                     /locus_tag="PXD69_002548"
     CDS             complement(1776..2567)
                     /locus_tag="PXD69_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA25"
                     /protein_id="HDL6284685.1"
                     /translation="MREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKP
                     YSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPA
                     QYQPVLLEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            complement(2625..3158)
                     /gene="aadB"
                     /locus_tag="PXD69_002549"
     CDS             complement(2625..3158)
                     /gene="aadB"
                     /locus_tag="PXD69_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase
                     ANT(2'')-Ia"
                     /protein_id="HDL6284686.1"
                     /translation="MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDD
                     IDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEA
                     PQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLG
                     AEKVEVLRAAFRSRYAA"
BASE COUNT          768 a          918 c          805 g          808 t
ORIGIN      
        1 agtgccgatt gaccgagctt taacggcact gttgcaaagt tagcgatgag gcagcctttt
       61 gtcttattca aaggccttac atttcaaaaa ctctgcttac caggcgcatt tcgcccaggg
      121 gatcaccata ataaaatgct gaggcctggc ctttgcgtag tgcacgcatc acctcaatac
      181 ctttgatggt ggcgtaagcc gtcttcatgg atttaaatcc cagcgtggcg ttgattatcc
      241 gtttcagttt gccatgatcg cattcaatca cgttgttccg gtacttaatc tgtcggtgtt
      301 caacgtcaga cgggcaccgg ccttcgcgtt tgagcagagc aagcgcgcga ccataggcgg
      361 gcgctttatc cgtgttgatg aatcgtggga tctgccactt cttcacgttg ttgaggattt
      421 tacccagaaa ccggtatgca gctttgctgt tacgacggga ggagagataa aaatcgacag
      481 tgcggccccg gctgtcgacg gcccggtaca gatacgccca gcggccattg accttcacgt
      541 aggtttcatc catgtgccac gggcaaagat cggaagggtt acgccagtac cagcgcagcc
      601 gtttttccat ttcaggcgca taacgctgaa cccagcggta aatcgtggag tgatcgacat
      661 tcactccgcg ttcagccagc atctcctgca gctcacggta actgatgccg tatttgcagt
      721 accagcgtac ggcccacaga atgatgtcac gctgaaaatg ccggcctttg aatgggttca
      781 tgtgcagctc catcagcaaa aggggatgat aagtttatca ccaccgacta tttgcaacag
      841 tgcccgttga agtaaccggc gctgcgcggt tttatcgcgc agcgtccgag ttgactgccg
      901 ggttgggcgg taacgcttca atagagcgaa ggattgcccg cacgattgcc tccctcttga
      961 aaagatcatc cattctgttt ggcgtatcaa tattcagtgc gaagaatacg gagccagtcg
     1021 gccactcaac ccatcctacc caccaaccca tacggccttc ccagcccgtc tttgcacgca
     1081 gtatccagtt gcgaccggct tccacaatca tgagatcctt gaccaagcgc tgatgttcta
     1141 cccgaaaggg cagctcgtta cgatagagct tcctgagaaa tgcaatttgc tcctgcgccg
     1201 agattgcaag gctgccttct atccagtaat cgccattact tgtcgaagga tcggcgttgc
     1261 catagtcgat tttcttcaaa tagcgccgag ctttgtcatc accaatttcc tttgcaaata
     1321 gctcatacac ccaaacagta gaattccgca ttgctgatcg caaatcttgg tcttgattgt
     1381 ggcctgcaaa gcccctgtta acgccgtccc atcgaaaaat ctggaactca tcacgaacag
     1441 cgcctgcatc aagtgcaaaa agtgtatgag gtatcttgaa tgtcgatgca ggcgagtagc
     1501 gtttcttcga tcgcacagga tcaaaaacca acatggcacg atccgcttgg cgttcgtctg
     1561 ccacaactat cgtgcctttg gcttgaaatt cgctgaaaaa cttcctccag tcagaacgtt
     1621 ctagcgtgcc ttcttgcgca tgcgcgaaag tggcaagaga aaaaatggag aaaagtatcg
     1681 cgaagattcg gattgccatt aacttttcct taatgcccaa cggccaaggt aagccgcgcc
     1741 gcgaagcggc gtcggcttga acgaattgtt agacattatt tgccgactac cttggtgatc
     1801 tcgcctttca cgtagtgaac aaattcttcc aactgatctg cgcgcgaggc caagcgatct
     1861 tcttcttgtc caagataagc ctgtctagct tcaagtaaga cgggctgata ctgggcaggt
     1921 aggcgtttta ttgcccagtc ggcagcgaca tccttcggcg cgattttgcc ggttattgcg
     1981 ctgtaccaaa tgcgggacaa cgtaagcact acatttcgct catcgccagc ccagtcgggc
     2041 ggcgagttcc atagcgttaa ggtttcattt agcgcctcaa atagatcctg ttcaggaacc
     2101 ggatcaaaga gttcctccgc cgctggacct accaaggcaa cgctatgttc tcttgctttt
     2161 gtcagcaaga tagccagatc aatgtcgatc atggctggct cgaagatacc cgcaagaatg
     2221 tcattgcgct gccattctcc aaattgcagc tcgcgcttag ccggataacg ccacgggatg
     2281 atgtcgtcat gcacgacaag ggtgacttct atagcgcgga gcgtctcgct ctcgccaggg
     2341 aaagccgaag cctccataag atcattgagc aatgctcgcc gcgtcgtttc atcaagcttt
     2401 acggccacag taaccaacaa atcaatatcg ctgtatggct tcaggccgcc atccactgcg
     2461 gagccgtaca aatgcacggc cagcaacgtt gattccagat ggcgctcaat gacgcttagc
     2521 acctctgata gttggttcga aatttcgatg gtcaccgctt ccctcatgat gtctaacacc
     2581 tgagttaagc cgcgccgcga agcggcgtcg gcttggacga attgttaggc cgcatatcgc
     2641 gacctgaaag cggcacgcaa gacctcaacc ttttccgccc cgagtgaggt gcatgcgagc
     2701 ctgtaggact ctatgtgctt tgtaggccag tccactggtg gtacttcatc ggcatagtaa
     2761 aagtaatccc agatgatcgc ctcccagctg ttacaacgga ctggccgccc ggcgatgacg
     2821 ccctcagccg cctctgggca cgagccctgc ggagcctccg cgatttcata cgcttcgtct
     2881 gcccaccaag caggttcgca gtcaagtaac tcatccccga tctccgctaa gaatccatag
     2941 tccaactcct ccatgacgcg cccgccgagc atttcaacta ttgcctcgag ctcgccgcgc
     3001 ctctcgccgg gaaacgtcag atcaatatca tcgtgcttgc gtgttacacg ccctagccgt
     3061 gcatcgatcg cccagccccc accgatccag agcggcagat ttcgctcatc tgccgcagct
     3121 agaattttgt gtatcaatgt gacctgcgtt gtgtccatgc ggcctaacct ttgttttagg
     3181 gcgactgccc tgctgcgtaa catcgttgct gctaatacgg tgatcagcag tataataata
     3241 attgatttat tcattgagat cctaaaaatc tatcagtgat agagtgggtg taatatatc
//
LOCUS       DANLXO010000161         3287 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.163, whole genome shotgun sequence.
ACCESSION   DANLXO010000161 DANLXO010000000
VERSION     DANLXO010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.163"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..591)
                     /locus_tag="PXD69_002550"
     CDS             complement(<1..591)
                     /locus_tag="PXD69_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284687.1"
                     /translation="MKKYLMLCSLWFLSACFNESYDFRGKEFEEPVQAILVESDKIYF
                     IGSTIDAIFDKTLIDNTKASDVIYFLNKLLQSPYGRKISNHLITLAIYDENIQIQYSP
                     QFIAKNLTMSDIQALQKLGFQFSHSKEYLWKSYAGLGGKITQFKNRKEILEKYKFKQP
                     IIAKAKSYQKSIEFSFDDTISVIAAPITIPASIILFV"
     gene            825..1115
                     /locus_tag="PXD69_002551"
     CDS             825..1115
                     /locus_tag="PXD69_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDL6284688.1"
                     /translation="MALRPLHDKVILKREEVETKSAGGIVLTGSAATKSTRGKVIAVG
                     TGRILDNGSVQPLAVKVGDVVIFNEGYGVKTEKIDGEEVLILAEHDILAIVE"
     gene            1184..2824
                     /gene="groL"
                     /locus_tag="PXD69_002552"
     CDS             1184..2824
                     /gene="groL"
                     /locus_tag="PXD69_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608625.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDL6284689.1"
                     /translation="MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDRAY
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNE
                     GLKAVAAGMNPMDLKRGIDKAVAAVVEELKAISKPCETSKEIEQVGTISANSDSTVGQ
                     LIAQAMEKVGKEGVITVEDGTGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP
                     YILLVDKKVSNIRELLPVLEGVAKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEELGQAKRVVISKDNTTIID
                     GIGDETQIKGRVAQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVAMKEK
                     KDRVDDALHATRAAVEEGIVPGGGVALVRAANKVADTLKGDNEEQNVGIKLALRAMEA
                     PLRQIVANAGEEASVVARNVKEGSGNYGYNAGTEQYGDMLEMGILDPTKVTRSALQFA
                     ASIAGLMITTECMITDLPKEEKLDPAAMGGMGGMGGMM"
     gene            complement(2949..3275)
                     /locus_tag="PXD69_002553"
     CDS             complement(2949..3275)
                     /locus_tag="PXD69_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5339 domain-containing protein"
                     /protein_id="HDL6284690.1"
                     /translation="MLKRILGITLCTILVSSNAIASVKTSSLTVAKPTLSKNLPTECE
                     KMFNTANKLVSDAERQPGTHTQVLKMKNKLSLTKQQILKMDSELQQKSCEKGLTALNS
                     LKQKHQ"
BASE COUNT         1044 a          527 c          730 g          986 t
ORIGIN      
        1 tacaaataaa ataatagatg cgggaatcgt aattggtgct gcaatgaccg aaatggtgtc
       61 atcaaagcta aattctatgc ttttctgata acttttcgct ttagcgatta taggttgctt
      121 aaatttatac ttttctagta tttccttgcg atttttaaac tgtgtgattt taccaccaag
      181 acctgcatag cttttccata gatattcttt tgaatggcta aattgaaaac ctaacttttg
      241 tagagcttga atatcgctca tggtgagatt ttttgcaata aattgcggac tgtactgaat
      301 ttgaatattt tcatcataaa tggctaaagt aattaggtga ttactgatct tccttccata
      361 cggactttga agaagtttat tcaaaaaata aataacatct gaagcttttg tattatctat
      421 cagcgtttta tcaaatatcg catcaattgt ggaaccaatg aaataaattt tatctgattc
      481 aaccaaaatt gcttgtacag gttcttcaaa ttcttttcct ctaaaatcat aactttcgtt
      541 aaagcatgcg gagagaaacc atagtgagca gagcattaag tattttttca ttttattatc
      601 ctatcttgaa attaatagtt taaatggtat aagagaattg gggtttttct aaacagaaac
      661 agatttctta ggtatatagt tttatcaaaa atggtcaaat ttgtaaaaaa ttttacaaat
      721 ttgaccgctt gcacttgaaa ctctaaaatc tgcctttata ttgttaggcg ttacgcattt
      781 tgcgtgaagt tttatttatt catttttaag aaaaggaaca tattatggca cttcgtccat
      841 tacacgataa agttatttta aaacgtgaag aagttgaaac aaaatcggca ggcggtattg
      901 ttttaaccgg ttcggcagca acaaaatcaa cccgtggcaa agtaattgca gtaggaacag
      961 gtcgcatttt agacaatggt tctgttcagc ctttagcagt taaagtgggc gatgtagtga
     1021 tttttaacga aggctacggc gtaaaaaccg agaaaattga cggcgaagaa gtgctaattt
     1081 tagcagagca cgatattttg gcgattgtag aataatttcg ttctgcacaa gcggttaaaa
     1141 aagcaaaatt ttttacatat ttcaaataca aaggatttag aaaatggcag caaaagacgt
     1201 gaaatttggt aacgatgcac gcgtaaaaat gttaaaaggc gtgaatattt tagccgatgc
     1261 ggtaaaagta actttaggtc cgaaaggtcg taatgtggtg ttagatcgtg cttatggtgc
     1321 accaacgatt acaaaagacg gtgtgtcggt tgcccgtgaa atcgaattag aagataaatt
     1381 tgaaaatatg ggggctcaaa tggtgaaaga ggttgcctct aaagccaatg atgccgccgg
     1441 tgacggtaca actaccgcaa ctgtattagc tcaagcgatt gtaaacgagg gcttaaaagc
     1501 agtggctgcg ggtatgaacc caatggattt aaaacgtggt atcgataaag cggttgcagc
     1561 agtggttgaa gagttaaaag cgatttcaaa accgtgcgaa acctcaaaag aaattgagca
     1621 agtagggacg atttctgcaa actcagattc aacagtcggt caattaattg ctcaagcaat
     1681 ggaaaaagtg ggcaaagagg gcgtgattac tgttgaagac ggtacaggtt tagaagatgc
     1741 attagacgtg gttgagggta tgcaatttga ccgtggttac ttatcgccat actttatcaa
     1801 taaaccggaa gccggtacgg ttgagttaga aaacccatat attcttttag tggataaaaa
     1861 agtgtctaac attcgtgaat tattaccggt gttagaaggt gttgcaaaag caggtaaacc
     1921 gttattaatt attgccgaag atattgaagg cgaggcgtta gctaccttag tggtgaacac
     1981 tatgcgtggt atcgtgaaag tggcggcagt gaaagcacct ggctttggtg atcgccgtaa
     2041 agcaatgtta caagatattg cgatcttaac tgcaggtact gtgatttctg aagagatcgg
     2101 tatggagctt gaaaaagcaa cccttgaaga gcttggtcaa gcaaaacgtg tggttatcag
     2161 caaagataac accacaatta ttgacggtat tggtgatgaa actcaaatca aaggtcgtgt
     2221 agcacaaatc cgccaacaaa tcgaagattc aacttcagat tacgacaaag aaaaactaca
     2281 agagcgtgta gcaaaattag ccggtggtgt tgcggtaatt aaagtaggtg cggcaactga
     2341 agtggctatg aaagagaaaa aagaccgtgt tgatgatgct cttcacgcaa cccgtgctgc
     2401 ggtggaagaa ggtattgtac cggggggcgg agttgcttta gtgcgtgcag ccaacaaagt
     2461 ggctgataca ctaaaaggcg ataacgaaga gcaaaatgta ggtatcaaac ttgccttgcg
     2521 tgcaatggag gctccattac gccaaatcgt tgccaatgca ggtgaagaag cctcagttgt
     2581 agcccgcaac gtgaaagaag gttcaggcaa ctacggctat aacgcaggta cagagcagta
     2641 cggcgatatg cttgaaatgg gaattttaga cccaactaaa gtgactcgtt cagcacttca
     2701 attcgcggct tctattgcag gtttaatgat cactacagaa tgtatgatta ccgatctgcc
     2761 aaaagaagag aaattagatc ctgccgcaat gggcggtatg gggggaatgg gcggaatgat
     2821 gtaattgccc attgagtgaa caaaagctac tgaaattaat tcagtagctt ttttgttggt
     2881 aacaagtggt taaatttatg ctattttttg caaataaaaa accaagcaag taagcttggt
     2941 tttagcgttt attgatgttt ttgtttaagg ctgtttagtg ctgttaaacc tttctcacaa
     3001 cttttttgct gtaattcaga atccattttt aggatttgtt gctttgttaa agaaagttta
     3061 tttttcattt ttagcacttg agtatgagta ccaggctgtc tttctgcatc agagaccaat
     3121 ttatttgccg tgttaaacat tttctcacat tcagttggca aatttttact taaagtaggt
     3181 tttgcaactg taagtgatga ggttttaaca cttgctatag cattactgga aaccaatatg
     3241 gtacaaagtg ttattcctaa aattcttttt agcatgcgtt ctccaca
//
LOCUS       DANLXO010000162         3198 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.164, whole genome shotgun sequence.
ACCESSION   DANLXO010000162 DANLXO010000000
VERSION     DANLXO010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3198
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.164"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(37..1872)
                     /gene="glmS"
                     /locus_tag="PXD69_002554"
     CDS             complement(37..1872)
                     /gene="glmS"
                     /locus_tag="PXD69_002554"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDL6284691.1"
                     /translation="MCGIVGAVAQRDIAEILVDGLHRLEYRGYDSAGVAVLNADDKTM
                     QIVRRVGKVKALDEALDTKPLLGGTGIAHTRWATHGEPSETNAHPHRSGKIAVVHNGI
                     IENYEELKIVLQERGYVFQSQTDTEVIAHLVEWELRSASSLLEAVQKTVVQLRGAYGT
                     VVLNEEEPEHLIVARSGSPLVIGYGVGENFLASDPLALLSVTRRFAYLEEGDVAEITR
                     RTVDIYDREGNKAEREIHEGNFEADAADKGQYRHYMQKEIFEQPVAIMNTLDGRIKDG
                     KVDISAIAPNAAEILSKVEHVQIVACGTSYNAGMVSRYWFESIAGVSCDVEIASEFRY
                     RKFVTRPNSLLITLSQSGETADTLAALRLAKESGYMAAMTVCNVASSSLVRESDFAFL
                     TKAGVEIGVASTKAFTTQLTCLLLLNVAIGRLQGRMSEEQEHHIVQSLQRLPAQIESA
                     LVFDKQIEKLSEDFADKHHTLFLGRGEYYPVAMESALKLKEISYIHAEAYAAGELKHG
                     PLALIDSDMPVVVVAPENDLLEKVKSNIEEVRARGGQLYVFADHDAGFEEAEGFKTIV
                     MPKVDEVTAPIFYTVPLQLLSYHIALIKGTDVDQPRNLAKAVTVE"
     gene            complement(1920..2681)
                     /locus_tag="PXD69_002555"
     CDS             complement(1920..2681)
                     /locus_tag="PXD69_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HDL6284692.1"
                     /translation="MSKRNTQQRRHLIVQMVQEKNEVSVDELAHFFETSEVTIRKDLT
                     ALEESGFLLRKYGGAVKIPSEMMEEAFIEQLSIQKKMIAQAARDCIRDHNRIIIDSGS
                     TTGALVKALNQTGLVVMTNSLNLATELTSLECEPTVLMTGGTWDSRSESFQGKVAEQV
                     LRSYDFDQLFIGADGLDLARGTTTFNELVGLSQVMAEVSREVIVLIESQKIGRKMPNI
                     ELKWQNITKIITDSQLSFETKEQIEKMGVEVVIAK"
     gene            complement(2838..3038)
                     /locus_tag="PXD69_002556"
     CDS             complement(2838..3038)
                     /locus_tag="PXD69_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL6284693.1"
                     /translation="MKSILKVVGAMVLMVAVSGCNNMTKTQRNTAIGAAIGGVAGHAI
                     GESTGATLGGAALGGVIGSQIK"
BASE COUNT          898 a          757 c          561 g          982 t
ORIGIN      
        1 ataaaaaccc caagatatct tggggtttaa ctaacattac tctacagtca ccgcttttgc
       61 aaggttacga ggttggtcaa cgtccgttcc tttgattaag gcaatgtgat atgaaagtag
      121 ttgtaacggc acggtgtaga aaatcggtgc ggttacttca tcaactttcg gcattacaat
      181 cgttttgaag ccttctgctt cttcaaaacc tgcatcgtga tcggcaaaca catataactg
      241 accgcctctt gcacgcactt cttcaatatt ggatttcact ttctcaagca agtcattttc
      301 cggtgctacc accactaccg gcatatcgct atcaattaat gctaacgggc cgtgttttaa
      361 ctcgcctgcg gcataagctt ctgcgtgaat atatgaaatc tcttttaatt tcaatgcaga
      421 ttccatcgca accgggtaat attctccacg acctaagaac aatgtgtggt gtttatccgc
      481 aaaatcttcc gataattttt cgatttgttt atcgaacact aacgcacttt caatttgtgc
      541 tggtaagcgt tgtaaagatt gcacgatatg gtgttcttgc tcttcactca ttctgccttg
      601 taagcgtcca atcgccacat ttaataacaa taagcaagtt aattgagtag tgaatgcttt
      661 ggttgatgct acaccaattt caacaccagc tttggttaag aatgcaaaat cggattcacg
      721 cactaatgaa gaacttgcca cattacacac cgtcattgcc gccatatagc cagattcttt
      781 cgctaaacgc agtgcagcta acgtatctgc ggtttcacct gattgtgaaa gcgtgattaa
      841 taagctgttc gggcgagtaa cgaatttacg gtaacggaat tcggaggcaa tttccacatc
      901 acagctcacg cctgcaatgg attcaaacca ataacgtgaa accataccag cattgtaaga
      961 ggttccacaa gccacaattt gcacgtgttc tactttcgat aaaatctctg ccgcattcgg
     1021 tgcaatggct gaaatatcta ctttaccgtc tttgatacga ccatctaagg tattcataat
     1081 cgcaaccggc tgctcaaaaa tctctttttg catatagtga cgatattgtc ctttatctgc
     1141 cgcgtctgcc tcaaaattgc cttcgtgaat ttcacgctct gccttgttgc cttcacggtc
     1201 ataaatatcc actgtgcgac gggtaatttc ggctacatca ccttcttcta gataagcaaa
     1261 acggcgagtt acgcttaata atgcaagtgg gtctgaagca aggaagttct cgcctacacc
     1321 gtaaccaatc actaacgggc tacctgagcg agccacaatt aaatgctccg gctcttcttc
     1381 atttaatacc actgtgccgt aagcaccacg cagttgcacc acggtttttt gtaccgcttc
     1441 caataatgaa gaagcagaac gcaattccca ttcaactaaa tgagcaatga cttcggtatc
     1501 ggtttgagat tggaacacat aaccacgctc ttgtaacact atttttaact cttcgtagtt
     1561 ttcgataatc ccgttatgaa ctactgcaat tttgccactg cggtgtgggt gagcattagt
     1621 ttctgacggc tcgccgtgcg ttgcccagcg agtgtgtgcg atcccagtgc cgcctaatag
     1681 tggcttagtg tctaacgcct catctaaggc tttgacttta ccgacacggc gtacaatttg
     1741 cattgtttta tcatctgcat ttaatactgc tacaccagca gagtcatatc cacggtattc
     1801 taagcgatgt aaaccatcaa ccaagatttc tgcgatatca cgttgtgcta ctgcacctac
     1861 aattccacac ataaatttgc tttcctatgt ttaagtttaa aaattcattt gagctactgc
     1921 tattttgcaa taaccacttc gacacccatt ttttcgattt gttctttcgt ttcaaaactt
     1981 aattgactgt cggtaataat tttggtaata ttttgccatt tcaattcaat attcggcatt
     2041 ttccgaccga ttttttgcga ttcaattaac acaatcactt cacggctcac ttctgccatc
     2101 acctgactta agccaactaa ttcattaaag gtagtcgtgc ctcgagccaa atctaaaccg
     2161 tccgcaccaa taaaaagctg atcgaaatca tatgaacgca atacctgttc tgctactttg
     2221 ccttgaaagg actcagaacg gctatcccaa gtgccgccgg tcatcaacac tgttggttcg
     2281 cattcgaggg aagtcaattc cgtcgctaaa ttcagcgaat ttgtcatcac caccaagccg
     2341 gtttggttca atgcttttac caaagctccg gtcgtgctgc cgctgtcaat aatgatgcga
     2401 ttatgatcac gaatacaatc acgtgcggct tgagcaatca ttttcttttg aatcgaaagt
     2461 tgctcaataa acgcttcttc catcatttcc gatggaattt ttaccgcccc accatactta
     2521 cgcaataaaa aaccactttc ttccaaagcg gttaaatctt ttctaatcgt aacttcagac
     2581 gtctcaaaga aatgagcgag ttcatctaca ctcacttcat ttttctcttg taccatttga
     2641 acaattaaat ggcggcgttg ttgcgtgtta cgttttgaca ttataatctt cacttaaatt
     2701 tcgtttcaaa acttttgcat tataaagaaa gctcgcgaaa agaaaagcag aaaatgcaaa
     2761 atttacaaaa tctatacaaa ataaaaccgc ttgtaatatt gatttacaag cggttgattt
     2821 cttgaaattt tttgcaatta tttgatttgg ctaccaatca cgccaccaag tgcggcacca
     2881 cctaaagttg caccggtaga ttcaccaatc gcgtgaccag ccacaccgcc aattgctgca
     2941 ccgattgcag tattacgttg cgtttttgtc atattgttac agccagacac agcaaccatt
     3001 aataccattg caccaacaac tttcaaaata gatttcataa taatccctca taattaatca
     3061 atttcaaata agccaatatt cttggctatg ctataagatt taatttattt agaaaggttc
     3121 aactactacc acctatgaat tgcaaatttt ttcacaattt aggccgcttg ttgattgaac
     3181 tgtgagcttg ctcacaga
//
LOCUS       DANLXO010000163         3190 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.165, whole genome shotgun sequence.
ACCESSION   DANLXO010000163 DANLXO010000000
VERSION     DANLXO010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.165"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..844
                     /locus_tag="PXD69_002557"
     CDS             <1..844
                     /locus_tag="PXD69_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL6284694.1"
                     /translation="AGVLFACINTLIPKLTSISPIDSNVIALVQYLAAFIFLVPSMNN
                     IGFFSSLKTEHFGQHCFRIFLSAIGIQCWTMALANQLPIWQGIALLMTSPLFVTIGSG
                     LFLKEKVDKKRWIATAMGFVGAMIILEPWSDHFEMIALLPIAAAFFWAGYSLMVKKLS
                     RYDSPTTMVAYLFILITPFNLLIALTNLSPSGFSLPSWSDFGFLILLGFFTALAQLAV
                     AKAYSVADASYIQPFDFIKLPLNVLAGWLVFNWVPPGKLWLGAAIIIAATIYITHAET
                     KQSN"
     gene            complement(923..1414)
                     /gene="ilvN"
                     /locus_tag="PXD69_002558"
     CDS             complement(923..1414)
                     /gene="ilvN"
                     /locus_tag="PXD69_002558"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDL6284695.1"
                     /translation="MRRTLAVLLENESGALSRVVALFSQRGFNIESLTVAPTDDPSLS
                     RMTIVAQGEEQVLEQIEKQLHKLIDVFKVSNLSAYEHVEREVLLVKVRATGSSRDELK
                     RMVDIYRGQIVDLTPKLYTIQLSGSTEKLNAFIEAVKEETTIVEIVRSGVISLSRGDK
                     NAL"
     gene            complement(1407..3128)
                     /locus_tag="PXD69_002559"
     CDS             complement(1407..3128)
                     /locus_tag="PXD69_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HDL6284696.1"
                     /translation="MKKLSGAEMIVQSLKDEGVEYVFGYPGGSVLDIYDAIHTLGLNH
                     VLVRHEQGAVHMADGYARSTGKVGCVLVTSGPGATNTITGILTAYTDSVPLVILSGQV
                     PSSLIGTDAFQESDMIGISRPVVKHSFLVKNTEEIPEIIKKAFYIASTGRPGPVVIDI
                     PKDVVNPLNKYPYEYPQEVSMRSYNPTVQGHKGQIKKALKALLVAKRPVLYVGGGVIS
                     AEGSPEITEFAQKLNLPVTCSLMGLGAYPASDKQYLGMLGMHGTFEANNAMHESDLIL
                     GIGVRFDDRTTNNLAKYCPNAKVIHVDIDPASISKTVQAYIPIVGSAKDVMEEFLSLL
                     GEENLAKNQVDLTAWWQQIDAWKARNCLAFEENSDVIKPQQVIRMIHKLTNGEAYVAS
                     DVGQHQMFAALHYGFDKPRRWINSGGAGTMGFGLPAAMGVKFAHPDATVVCVTGDGSI
                     QMNIQELSTAKQYDTPIVIVSLNNRFLGMVKQWQDIIYSGRHSQVYMNSLPNFAKLAE
                     AYGHVGIQIDHPSELEAKLTEAFSIKDKLVFVDVLVDETEHVYPMQVRGGAMNEMMLS
                     KTERTDA"
BASE COUNT          879 a          693 c          599 g         1019 t
ORIGIN      
        1 tgccggtgtg ttatttgcct gtatcaatac cttaattccc aaattaacgt ccatttcacc
       61 gattgactcg aacgtgattg cattggtgca atatttagct gcctttattt tcctcgttcc
      121 cagcatgaat aatatcggtt tcttctcttc attaaaaacc gagcattttg ggcaacactg
      181 tttccgtatt tttctatctg cgattggtat tcaatgttgg acaatggcac tcgctaacca
      241 attacctatt tggcagggaa ttgcgttatt gatgacttct ccattgtttg tgaccatcgg
      301 ctccggtctg tttttgaaag agaaagtgga taaaaagcgt tggattgcaa ccgcaatggg
      361 gtttgttggg gcgatgatta ttctagagcc ttggagcgat cattttgaaa tgattgcgtt
      421 actgccgatt gccgcggctt ttttctgggc aggttattcg ctaatggtga aaaaactctc
      481 tcgttacgat agcccaacta cgatggtcgc ttacctgttt attctaatta cgccttttaa
      541 tttgttgatt gcactcacga accttagccc tagtgggttt agtctgcctt cttggagcga
      601 tttcggcttt ttaatcttac ttggtttctt tacggcgtta gcgcaactgg cggtagccaa
      661 agcctacagt gtagcagatg cttcctacat tcagccgttt gattttatta aattaccttt
      721 gaacgtatta gccggttggc ttgtatttaa ctgggtgcca ccgggtaaat tatggctagg
      781 agctgcgatt attattgctg cgaccattta tattactcac gctgaaacta aacagagtaa
      841 ttagcaacaa attcacgcta cataaaaatc cctttatctc aaagataaag ggatttgcaa
      901 attttaagct aaaattgacc gcttacagag cgtttttatc gccacgagat agactaatca
      961 cgccagagcg aacaatctct acaatcgttg tttcttcttt aactgcctca ataaatgcat
     1021 tgagcttctc ggtagaaccg gataattgaa tggtgtaaag tttcggtgtt aaatctacga
     1081 tttgcccacg gtaaatatct accatacgtt tcagttcatc acgagatgaa cctgtagctc
     1141 gcacttttac caataacact tcacgctcaa cgtgttcata agcacttaag ttactcactt
     1201 taaacacatc aatgagtttg tgtagttgct tttcgatttg ttctaacacc tgttcttcgc
     1261 cttgcgcgac aattgtcata cgggaaaggc ttggatcatc agtaggggca acggtcaagc
     1321 tttcaatgtt aaaaccacgc tgcgagaaaa gggcaactac acgagataat gcacctgatt
     1381 cattttctaa taatacggct aatgttctac gcatctgttc tctccgtttt acttaacatc
     1441 atttcattca ttgctcctcc acgcacttgc attgggtaaa catgttccgt ttcatcgacc
     1501 aatacatcaa caaatacaag cttatcttta attgagaatg cctcagttaa ttttgcctcc
     1561 aattcagaag ggtggtcgat ttgaatccca acgtggccat aagcctctgc taatttagca
     1621 aagttaggta gagaattcat atacacctgt gaatggcggc cagagtaaat aatatcttgc
     1681 cactgtttca ccatacctaa gaaacggtta tttaagctga caatcacaat cggtgtgtcg
     1741 tattgctttg cggtggaaag ttcctggata ttcatttgga tactaccatc accggttaca
     1801 caaacaacag tggcatcagg gtgggcaaat tttaccccca tcgcagcagg taagccaaag
     1861 cccattgtgc ctgcaccgcc tgaattaatc caacgacgtg gtttatcgaa cccataatgc
     1921 aatgcagcaa acatttgatg ttgtccaaca tctgaggcaa cataagcctc cccattggtc
     1981 aacttgtgga tcattctaat cacttgttgt ggcttaatca catcactgtt ttcttcaaag
     2041 gctaagcaat tacgagcttt ccaagcatca atttgttgcc accaagcggt taaatctacc
     2101 tgattttttg caagattttc ctcacctaat aaagataaaa attcttccat tacatcctta
     2161 gcactgccta caattggaat ataagcttgt actgttttgg aaattgaggc tggatcaata
     2221 tccacgtgga tcacttttgc attcgggcaa tattttgcta agttatttgt tgtacgatca
     2281 tcaaaacgta ccccaatacc taaaatcaaa tcactttcgt gcattgcatt atttgcctca
     2341 aaagtgccgt gcatgcctaa catacctaaa tattgcttat cagaggcagg ataagcacct
     2401 aatcccatta atgaacaggt tacaggtaga tttagctttt gtgcaaactc tgtaatttct
     2461 ggcgaaccct ctgcactaat tacaccaccg cctacataaa gcactggacg ttttgctact
     2521 aatagtgctt ttaatgcttt tttaatttgc cctttatgcc cttgaactgt tgggttataa
     2581 gaacgcattg atacttcttg cggatattca tagggatatt tatttaatgg attgactaca
     2641 tctttaggaa tatcaataac taccgggcct ggtcgaccgg ttgatgcaat ataaaaggct
     2701 tttttgataa tttcaggaat ttcttctgta ttttttacta agaaactgtg ttttacaacc
     2761 ggacgagaaa tgccgatcat atcactttct tggaatgcat ctgtcccaat taaacttgat
     2821 ggaacttggc ccgacagtat tactaacgga acagagtcgg tataagcagt taaaatacca
     2881 gtaattgtat tcgttgctcc cggacctgaa gtcactagca cacagccgac tttacctgtt
     2941 gaacgggcat agccatcagc catatgtaca gcaccttgct cgtgtcgaac taaaacgtga
     3001 ttcaatccaa gtgtatgaat tgcatcataa atatcgagta cagagccacc cggatagccg
     3061 aaaacgtatt ctacgccttc atcctttaag gactgtacaa tcatttctgc accagaaagt
     3121 tttttcattg aatcctccaa caaaatagca ttttcttctc taagatggtt ggattttgca
     3181 gtaaaatttt
//
LOCUS       DANLXO010000164         3047 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.166, whole genome shotgun sequence.
ACCESSION   DANLXO010000164 DANLXO010000000
VERSION     DANLXO010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.166"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            115..1026
                     /locus_tag="PXD69_002560"
     CDS             115..1026
                     /locus_tag="PXD69_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HDL6284697.1"
                     /translation="MLYGLAIVLIPLFLGYLITLKNHRHMAIVNRVVSLCLYLILLVM
                     GISLGQIDNILTELPQIGGTAFSLVVILLLSNIIGLVIYDKLQPMKRDKVNQDQLPSR
                     LHLLIDSFKLIGITLLGGIIGYFTKGVVDFPLHASTYVLEVMIFGVGIQLRNSGIPLR
                     EVFFNKRGIYTSIVMVASSLIGGVISAFTLDLSLAKGLTFASAFGWYSLSSVLVNDAW
                     GPIYGSIAFFNDISREILCLFLVPLFMRQFPSTAVGIGGATSLDCMLPIIQKSGGIQI
                     VPLAISFGFIVNLAAPLLLAVFIGLEG"
     gene            1132..2898
                     /gene="aspS"
                     /locus_tag="PXD69_002561"
     CDS             1132..2898
                     /gene="aspS"
                     /locus_tag="PXD69_002561"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDL6284698.1"
                     /translation="MMRSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREG
                     IVQVFFDEKDEALFKQASALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVV
                     YNNAEVLPLDFNQNNTEEQRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLD
                     IETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFR
                     DEDLRADRQPEFTQIDVETSFMTAEEVRALMEAMIHGLWKETLGVDLGKFPMMTWNEA
                     MTRFGSDKPDLRNPLEMVDVADILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKN
                     IDDYTQFVGIYGAKGLAWLKVNDMNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDI
                     VFFGADNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHH
                     PFTSPKELSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINE
                     EEQKEKFGFLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFPKTTAAACLMT
                     EAPSYANPKALEELAIRTIPQE"
BASE COUNT          857 a          632 c          670 g          888 t
ORIGIN      
        1 ttttccccaa aaacgaccgc ttgcaacaca aataactgta tataaaaaca gttttatttt
       61 atgcccttat tgttagaatt tcaagtttaa aaatagcgat aaaaaggata aaaaatgctc
      121 tacggtttag ccattgtgct gattccactt tttctcggtt acttaataac cctcaaaaac
      181 caccgccata tggcaatagt aaacagagtg gtcagcctct gcctttactt gattttatta
      241 gtgatgggga tttctctcgg acaaattgat aacattctca ccgaactgcc acagattggc
      301 ggtacggcgt ttagtttagt ggtgatttta ctcctttcaa acattatcgg cttggtgatt
      361 tacgacaaat tacaaccgat gaaaagagac aaagtcaatc aagatcaact tccctcccgc
      421 ctgcatttgt tgattgattc ctttaaatta atcggcatta ccttattagg cgggatcatc
      481 ggctatttca ccaaaggcgt ggtggatttc cctctgcacg ccagcaccta tgtgttagaa
      541 gtgatgattt tcggggtggg gattcaactg cgaaacagcg gtattcccct gcgtgaagtg
      601 ttctttaaca agcgggggat ttatacctcg attgtaatgg tggcaagttc cctgattggt
      661 ggcgtgattt cggcattcac cttagattta tcccttgcta aaggcttaac ctttgcctct
      721 gcattcggtt ggtattccct ttcaagcgta ttggtaaacg atgcttgggg cccgatttac
      781 ggcagtattg ccttttttaa cgacatctcg cgtgaaattt tatgcctgtt tttagtacca
      841 ctgtttatgc gtcaatttcc gtccaccgca gtcggcattg gcggagcgac ttcattagat
      901 tgtatgctcc ctattattca aaaatcgggc ggtattcaaa ttgtgccgct ggcaatcagc
      961 ttcggtttta ttgttaattt agccgctcca ttgttattag ccgtttttat tgggctggaa
     1021 ggataaatca ccgcttgttt gcttttattt atccatcttc gctgaatttt ccgctataat
     1081 ccttaagttt tccccgaaac ttgggatatt tattttcaaa aggataattt tatgatgcgt
     1141 tctcactact gcggtgcatt aaaccgctca caccttggac aaacagttac cttaagcggt
     1201 tgggttcatc gtgttcgtaa ccttggtcgt tttattttta tgcaaattcg tgatcgtgaa
     1261 ggcattgtgc aggtgttttt cgatgagaaa gatgaagcac ttttcaagca agcatcggcc
     1321 ttacgttctg aggcgtgcgt gcaaattcaa ggtgaagtga ttgcccgtga tgaatcgcaa
     1381 atcaataaag agatggcaac cggtgaaatt gaagtgttag taaaaaattt agtggtgtat
     1441 aacaacgctg aagtattgcc gttagacttc aatcaaaaca ataccgaaga acagcgttta
     1501 aaataccgct atttggattt acgccgccct gaaatggcag aaaagctcaa aacccgtgct
     1561 aaaatcacca gttttgtccg ccgttttatg gacgataacg gtttcttaga cattgaaacc
     1621 ccgatgctga ccaaagctac tcctgaaggt gcgagagatt acctcgtgcc aagccgtgtg
     1681 cataaaggca aattctatgc tctgccacaa tcacctcagc tatttaaaca gttgctaatg
     1741 atgtcgggct tcgaccgtta ttaccaaatc gtgaaatgtt tccgtgatga agatttgcgt
     1801 gccgaccgcc agccggaatt tacccaaata gacgtggaaa ccagctttat gactgccgaa
     1861 gaagtgcgtg cattaatgga agcgatgatc cacggcttat ggaaagagac cttaggcgtt
     1921 gatctcggta aattcccaat gatgacgtgg aatgaagcaa tgacccgttt cggttcagac
     1981 aaaccggatt tgcgtaaccc actggaaatg gttgatgtgg cagatatttt aaaatcggtt
     2041 gatttcaaag tatttagcgg tccggcgaat gatccgaaag ggcgtgtagt ggcacttcgt
     2101 gtgccaaacg gtgcagctct aacccgtaaa aatattgatg actacaccca atttgtcggc
     2161 atttatgggg caaaaggctt ggcttggtta aaagtgaatg atatgaacac aggtttagaa
     2221 ggcattcaaa gcccggttgc aaaattctta aatgaagaag tgctaaaagc cttagttaaa
     2281 cgcttaaact tgcaaaaaga cgacattgta ttcttcggtg cggataactg gcacgttgcg
     2341 actaacgcca tcggtgcgtt acgcttaaaa gtggggaacg atttaggctt aaccgatacc
     2401 acagcgtgga aaccgttatg ggtgattgat ttcccaatgt ttgaacgtga tgatgaaggc
     2461 aacttatcgg caatgcacca cccgttcact tcaccgaaag aattatcgcc ggaagaatta
     2521 gtgcaagatc cggaaaatgc ggtggcaaac gcttacgata tggtaattaa cggctacgaa
     2581 gtgggcggtg gctcggtacg tattttcagc cagcagatgc aacaaaccgt gttcagcatt
     2641 ttaggcatta acgaagaaga gcaaaaagag aaattcggtt tcttattaga tgcgttaaaa
     2701 ttcggtactc cgccacacgc aggcttagcc ttcggtttag accgcttaac gatgttgatt
     2761 acaggaactg ataacattcg tgatgtcatc gctttcccga aaaccaccgc tgcagcgtgt
     2821 ttaatgacag aagcaccaag ctatgcgaat ccgaaagcgt tggaagagtt agcaatccgt
     2881 acaattccac aagagtaatc ggtaggggcg aaacattttt cgcccttttt atttaacaag
     2941 cggtcgaaaa agtgaaaaac tttgcaaaag taataatcgc aaaattattc tctaaataac
     3001 ataataaaga ctcttttctc ttctctatgt tactactaaa tatcccc
//
LOCUS       DANLXO010000165         3001 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.167, whole genome shotgun sequence.
ACCESSION   DANLXO010000165 DANLXO010000000
VERSION     DANLXO010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.167"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(76..1671)
                     /locus_tag="PXD69_002562"
     CDS             complement(76..1671)
                     /locus_tag="PXD69_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL6284699.1"
                     /translation="MRLSQLSLSVLLLSASSLVAAAPVNTLINCVATPPMKLSPAITN
                     DANDFNASSQQIYNRLLAFKAGELTVEPSLAERWEISDDGLSYTFHLRKDVKFHSNKQ
                     FTPTRTLNADDVVFSFQRQMDLNHPYHKVSDGTYFYYHWMNLPKILKTVEKVDDYTVK
                     ITLQQPNAPFLTTLAMDFLSIYSKEYADKLLAEGKPELLDQAPIGTGPFVFQAYQTDQ
                     AVRYVANPDYFQGKAKFEKLIFSITPDAGTRYAKLKAGECDVIDFPNISDIAQMKQDP
                     KVNLLQRDGLNLAYIGLNSTKPALNNAKVRQALHYATDKKAIVEAVYQGGGTVASNPF
                     PDSVLGYNPNLPQYEFNLEKAKALLTEAGFADGFETEIWVQPVVRPSNPNPRRTAEII
                     QADWAKIGVKAKLVTHEWADFNKRTREGEFSTGTYGWTSRNGDPDNFLFPLLSKSNIP
                     GTNYGRWTDEKFEQLLAQAVQTQNRDERAKLYQQAVEIANEQTPFIPLAHAINYVPLS
                     KRVQGFVQNPFGYTPFYGVSLSE"
     gene            1820..2260
                     /gene="mioC"
                     /locus_tag="PXD69_002563"
     CDS             1820..2260
                     /gene="mioC"
                     /locus_tag="PXD69_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HDL6284700.1"
                     /translation="MTSICIITGSTLGGAEYVADHINEVLSEQGFEVELFNQATLADI
                     EGKTNLIIVTSTHGAGELPENIQQLFDDLANSSADFSSMKFGVIGLGSSDYDTFCNAV
                     NIVEEALKAKGASQVCESLRIDVMNNFDHDGSAEEWLPSFVEQL"
     gene            2272..2439
                     /locus_tag="PXD69_002564"
     CDS             2272..2439
                     /locus_tag="PXD69_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HDL6284701.1"
                     /translation="MNKISANKAKWIKIAIILIYMFSPVDILPEAILGPFGLVDDAAA
                     LMLLIKTILEK"
     gene            complement(2528..3001)
                     /gene="asnC"
                     /locus_tag="PXD69_002565"
     CDS             complement(2528..3001)
                     /gene="asnC"
                     /locus_tag="PXD69_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HDL6284702.1"
                     /translation="MYSKNTTKSEIDKLDQKILRWLIKDARTPYAEMAKVFGVSAATI
                     HVRVEKMRQAGIIESTKIVVDERKVGYDVCCFIGIILKSAKDYDKVIAKLSEFNEVVE
                     AYYTTGNYSIFIKVMTHTIEELHSVLAGKIQSIDEIQSTETLISLQNPISRDILP"
BASE COUNT          887 a          627 c          593 g          894 t
ORIGIN      
        1 ttctaaaaga aaagcagtct attctctacc acattttgca aaaaagtggc aaaaatagac
       61 cgcttgtatg gcatatcact ccgataaact caccccataa aatggcgtgt agccaaacgg
      121 attttgcaca aaaccttgca cccgtttgct gagtggtaca taattgatag cgtgagccag
      181 cggaataaat ggcgtttgtt cgttggcaat ttccaccgct tgttgataga gcttcgcccg
      241 ctcgtcacgg ttttgggttt gtacagcttg agctaataac tgctcaaatt tctcatccgt
      301 ccaacgccca taatttgttc ccggaatatt agatttgctt aataaaggga agaggaaatt
      361 atcaggatca ccattacggc ttgtccaacc ataagtgccg gtagagaact cgccttcacg
      421 ggtgcgtttg ttaaaatccg cccattcgtg ggtcactaat ttcgctttca ccccgatttt
      481 cgcccaatcc gcctgaataa tttcagccgt tcgacgtggg tttgggttag aagggcgcac
      541 taccggttgt acccaaattt ccgtttcaaa tccatcggca aagccggctt ctgttaatag
      601 ggctttggct ttttcaaggt taaattcata ttgcggtaaa tttggattat agcccaacac
      661 cgaatcaggg aacggattac ttgccaccgt gccaccgcct tgataaacag cctcgacaat
      721 cgctttctta tcggttgcat aatgcaaggc ttggcgaact ttggcgttat ttaatgccgg
      781 tttggtgctg tttaagccga tataagctaa attcagcccg tctctctgta acaaattcac
      841 cttcggatct tgtttcattt gggcaatatc ggaaatattc gggaaatcaa tcacatcgca
      901 ttcacccgct ttcagtttgg cataacgagt gcccgcatca ggggtaatac taaaaatcag
      961 tttctcaaat tttgctttac cttggaaata atccgggttc gcaacataac gcaccgcttg
     1021 atcggtttga taggcttgga acacaaaagg ccctgtgccg atcggggctt gatccaataa
     1081 ctccggcttg ccttccgcca gcaatttatc cgcatattct tttgaataaa tcgacaagaa
     1141 atccatcgct aaggttgtca gaaaaggagc attaggttgc tgtaaggtga ttttaacagt
     1201 gtaatcgtcc actttttcca ctgtttttaa aatcttcggc aaattcatcc aatggtaata
     1261 gaaataagta ccgtcagaga ccttatggta agggtggttt aaatccatct ggcgttggaa
     1321 cgagaacact acatcatccg cattcagcgt tcgagttggc gtaaattgtt tattggaatg
     1381 aaatttcacg tctttacgta aatggaatgt gtaacttaag ccatcgtcac tgatttccca
     1441 acgttccgcc aaactcggct caaccgttag ttcaccggct ttaaacgcta ataagcgatt
     1501 ataaatttgt tgtgaactgg cgttgaaatc attggcatca ttagtaattg caggactaag
     1561 tttcatcggt ggagttgcca cgcaattaat caacgtattt accggagctg ctgccaccaa
     1621 actgctggca cttaagagta aaacagaaag agataattga gaaagacgca taaagactcc
     1681 ttaacatttt ctactaactt actcggcatt aacgtatttt caaaataact aaaggttata
     1741 atttataatc agaataatca gttgcaaacc aatgattctt ggctagaata ttggcagttt
     1801 tttaaacgag agatttacta tgacatcaat ttgtatcatc accggcagca ccttaggcgg
     1861 tgcggaatat gttgccgatc acattaatga ggtattaagc gaacaaggtt ttgaagtgga
     1921 actgtttaac caagccaccc ttgccgatat tgagggcaaa accaatctga ttatcgttac
     1981 ctctacccac ggagccggcg agttacccga aaatatccaa cagctatttg acgatttagc
     2041 aaatagctcg gctgatttca gcagtatgaa atttggtgta atcggtttag gtagctccga
     2101 ctatgacacc ttctgcaatg cagtaaatat tgttgaagaa gctctcaaag cgaaaggggc
     2161 aagccaagtt tgcgaatcac tgagaattga tgtaatgaat aatttcgacc acgatggcag
     2221 tgctgaagaa tggttaccat catttgttga acaattataa cttaagtatc aatgaacaaa
     2281 atcagtgcaa ataaggcaaa gtggattaaa atcgctatta tcttaatcta tatgttcagc
     2341 cctgtagata ttctacccga agcgatttta ggcccattcg gtttggttga tgatgccgcc
     2401 gcattaatgc tattgattaa gactattttg gaaaaatagg catagtagac aaaatagttg
     2461 caaaaaacca aaacaaaacg accgcttgta acccaataca agtggtctta tcttttactt
     2521 aattctttta agggagaata tctcttgaaa taggattttg aagtgaaata agcgtttctg
     2581 ttgactgaat ttcatcaata gactgaattt ttcctgctaa taccgaatgc aactcttcga
     2641 tggtatgggt cattacttta ataaaaatag aataattacc agtggtatag tacgcctcaa
     2701 caacttcatt aaattcacta agtttagcaa ttactttatc ataatctttg gctgatttta
     2761 aaataatgcc aataaagcaa cacacgtcat acccaacctt acgctcgtcc actacgattt
     2821 tggtagattc aataatgccg gcttggcgca ttttttcaac acggacatgg atagttgcgg
     2881 cactcacacc aaaaactttt gccatttccg cataaggcgt gcgagcatct ttaattagcc
     2941 aacgtaaaat tttttgatcc agcttatcaa tttccgattt agtcgtgttt ttactgtaca
     3001 t
//
LOCUS       DANLXO010000166         2794 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.170, whole genome shotgun sequence.
ACCESSION   DANLXO010000166 DANLXO010000000
VERSION     DANLXO010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.170"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            43..288
                     /locus_tag="PXD69_002566"
     CDS             43..288
                     /locus_tag="PXD69_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284703.1"
                     /translation="MTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKEFIE
                     PGATIRRSNDQPSIGSVDCDPRKKIHYKFDVHLMNTL"
     gene            507..1184
                     /locus_tag="PXD69_002567"
     CDS             507..1184
                     /locus_tag="PXD69_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4852 domain-containing protein"
                     /protein_id="HDL6284704.1"
                     /translation="MCKKAFPLWGLIFGLLLSTSAFSVSKNFNYQNILMESLHFSENI
                     ELSSLSKDWLLYSDRNTYHKYQNDEFEFQDKIEQAGKKLQKLVDDRKSEEAPIVFTIP
                     VNSEFGNYDFEQGKFEYQPLMNGHMYISSNQYTENLPRKINLYVSNPEFIDGIPMGKD
                     KAKEFLQKRKNSLGNINRSVILYVDVQFEKAEGLDNLTGKVLSYSVKDNKDKVIYSSR
                     QNNNLLS"
     gene            1195..1575
                     /locus_tag="PXD69_002568"
     CDS             1195..1575
                     /locus_tag="PXD69_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284705.1"
                     /translation="MKFIDFGKQLAKPVKFIKQRTAFLPKPLQQAVVFAVIFAGLPLF
                     LVGFTVLRILNGTPVEDISTNDVAYNPNHVENTVNEIEDDSEDSKPEDLWDVIADQDE
                     NQLDGYRDGYFGYGLYQGGYFVKR"
     gene            complement(1628..>2794)
                     /locus_tag="PXD69_002569"
     CDS             complement(1628..>2794)
                     /locus_tag="PXD69_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL6284706.1"
                     /translation="QMNSELGNQQARVPLWWGLFHQINKGVTHALTASIPCKPDLRQV
                     RFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQSSQLSLTPAQVRETSWLGGRILLT
                     NSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANTGLKDRLLADVK
                     QNFSAKVIDFFSSKENADESILRTVLRAENMDISRGKVYPGYGGNLDPTFANATTRLT
                     SSVGSLAASFAAFPAFDAMRQALPMVHAFMLMAVIIITPLVIVMSGYSLKTLVTLTFV
                     SFALVSLTFWWELARWLDSWLLSALYDSSAHSRINPYFLENTQDDFIVNFVMGSMFLV
                     LPAIWLGSMSWAGVKIGDIAAGFTTDSLDSKSAGSQGGNLVKKGGKEISAGFNK"
BASE COUNT          918 a          521 c          530 g          825 t
ORIGIN      
        1 tcgtatgaca aaactacttt caaaaacccg attaaaaagg cagtgaccaa cgacggttcg
       61 attatcgcca gaggctcagg ttttactact tatgccttag agttggaaaa tgatggcttg
      121 aaatatctag tcggatttgt tcaaccaaat ggaaatgcaa aagagtttat tgagccggga
      181 gcaacaattc gccgtagtaa tgatcaacca agtattggtt ctgtggattg tgaccctcgt
      241 aaaaaaatcc attataagtt tgatgttcat ttgatgaata ctttataata cctttgtggt
      301 gctagagcta gcccaagtta aaaaagacaa agctcggcag atgaacaatt gtggtgtcag
      361 agctgaccca cgttaaaaaa cacaatgctc ggtaggtaaa tcccttaggt ttaaaaaatc
      421 taagggattt ttgtttaaaa gacttgctct ttattatcag gtggatctat cataatttaa
      481 actctctaat gtgtcaggag ataaaaatgt gtaaaaaagc tttcccatta tggggcttaa
      541 tcttcggatt actgctatcc acttcagcat tctcagtgtc taaaaacttc aactatcaaa
      601 acatattgat ggaatcatta cattttagtg agaatatcga gcttagttcg ttatctaaag
      661 actggttact ttacagcgat agaaatacgt atcataaata tcaaaatgac gagtttgagt
      721 ttcaggataa aattgagcaa gctggtaaga aactacaaaa actggtggat gacagaaaat
      781 ctgaagaagc ccctattgtt ttcacaattc ctgtaaactc agaattcggg aattatgatt
      841 ttgaacaagg taagtttgag taccaacccc tgatgaatgg gcatatgtat atttcttcta
      901 atcaatatac tgaaaatttg ccaagaaaaa ttaatctgta tgtttctaat cccgagttta
      961 ttgacggtat acctatgggc aaggataaag ctaaagagtt tttacagaag cgtaaaaatt
     1021 ctttgggaaa cataaatcgc tctgttatat tgtatgttga tgtacaattt gaaaaagcag
     1081 aaggattaga taatttaaca ggaaaagttt tatcttattc tgtaaaagac aataaagata
     1141 aagtaattta tagtagtcgc caaaacaata accttttatc ttaggaaaga tactatgaaa
     1201 tttatcgatt tcggaaagca gctcgctaag ccggttaaat ttatcaaaca acgtaccgca
     1261 tttttaccaa aaccgctaca acaagctgtc gtttttgcgg tgatttttgc aggacttccc
     1321 ttgtttttag ttggattcac ggttctgcga attctcaatg gaacaccagt agaagatatt
     1381 tcaacaaatg acgtagcata taatccaaac cacgtcgaaa acacggttaa tgaaattgaa
     1441 gatgatagtg aggatagtaa gccggaagat ttatgggatg taattgctga tcaagacgaa
     1501 aatcagcttg atggatatcg tgatggatat tttggatatg gactctatca gggtggctat
     1561 tttgtaaaaa gatgagaaaa tatgattaga aattaataag gtagagatta acctctacct
     1621 tattgtttta tttgttaaac cctgcagata tttccttacc gcctttctta actaaattac
     1681 caccttgaga gcctgcggat ttactatcta atgaatcagt agtaaaaccg gcagctatat
     1741 ctcctatttt tactccagcc cacgacatac tgcctagcca aatcgccggt aaaaccaaga
     1801 acatcgaacc catcacaaaa ttgacgataa aatcatcttg cgtattttca aggaaatacg
     1861 gatttattcg actatgtgca ctggaatcat atagagcgga tagtagccaa gaatctaacc
     1921 atcttgctaa ttcccaccag aatgtcagtg ataccaaagc aaaactcaca aaagttaatg
     1981 taactaatgt tttgagagaa taaccactca tcacaataac cagcggagta atgatgatca
     2041 cagccatcaa cataaaagca tgtaccatcg gcagtgcttg tcgcattgca tcgaatgctg
     2101 gaaaggctgc aaagctggca gctaagcttc ccactgaaga tgttaatcga gtcgttgcat
     2161 ttgcaaatgt aggatctaaa ttccccccat acccgggata aactttccct ctcgaaatat
     2221 ccatattctc tgctcgtaat acagtacgga gtatggattc atccgcattt tctttgctgc
     2281 taaaaaaatc aatcactttt gcagagaagt tctgtttgac atcagctaat aaacgatctt
     2341 ttaaaccagt attcgccgta tcccaccact ctgcacaatt tggaaaacca ccttccccat
     2401 tattcggcaa tccattatcc cgggaagcat tgtagggaaa tagactatga ggttgttgag
     2461 ctcgataacg gggataaagc tcactgtttg tcaaaagaat acgaccacct aaccagctgg
     2521 tttcacgcac ctgtgccgga gtcaatgaga gctgactgct ttgaattttc tgacgtgcag
     2581 gtacataaca ttgttgtaca aataagcgaa cctcagtcaa taatgcagga ttattgattt
     2641 tttcatgttg gacctcaaag cgaacttgac gtaaatccgg tttacacgga attgaagctg
     2701 ttaatgcgtg tgtaactcct ttgttgattt gatggaataa tccccaccaa agcggtactc
     2761 tcgcttgctg gttgcccaat tcagagttca tttg
//
LOCUS       DANLXO010000167         2793 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.171, whole genome shotgun sequence.
ACCESSION   DANLXO010000167 DANLXO010000000
VERSION     DANLXO010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2793
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.171"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(45..120)
                     /locus_tag="PXD69_002570"
     tRNA            complement(45..120)
                     /locus_tag="PXD69_002570"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(85..87),aa:Gly,seq:gcc)
     gene            complement(286..1524)
                     /gene="pepT"
                     /locus_tag="PXD69_002571"
     CDS             complement(286..1524)
                     /gene="pepT"
                     /locus_tag="PXD69_002571"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDL6284707.1"
                     /translation="MKQSLLNRLLRYTQIHTTSDPKSQTVPSSQQQWDLLHLLKTEVE
                     AMGLSEIYLDPNGYLFASLPANIDKTLPVLGLIAHVDTSPDFNGENVKPQVIEAYQGG
                     NILLNGSGDYLSPTDFPNLNKLIGDTLVTTDGTSLLGADDKSGIAIILSAIEYLQANP
                     HIPHGKIRIGFTTDEEIGRGADHFDVNAFGADVAFTFDGGPLGELQYENFNADAATVT
                     FFGRSVHPGTAKGKMINALERACEFQHRLPPHLTPATSEGREGFIMLHGIEGGIDKAE
                     IHYILRSFERDELAAFGKMLNDTLAEMQQIYGEHCGKVEIVEQYRNMREVLDDYGYLV
                     EIAENAMREQGIEPNLEPIRGGTDGSRLSFMGLPCPNLFTGGENFHGRFEFISVDTME
                     KATKVVIDICRKFADYDFNK"
     gene            complement(1544..1933)
                     /locus_tag="PXD69_002572"
     CDS             complement(1544..1933)
                     /locus_tag="PXD69_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL6284708.1"
                     /translation="MYMLDTNTVSYFFRGNANVVAKLKSINPERLCISSVTAAELVYG
                     VAKRNNGQLSQFLDYFLSSVKVLDWNYRCAELYGKLRAEMEKNGKVMGVQDQMIASHA
                     LAEECILVSSDQAFKMVPDLKLENWLH"
     gene            complement(1934..2194)
                     /locus_tag="PXD69_002573"
     CDS             complement(1934..2194)
                     /locus_tag="PXD69_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL6284709.1"
                     /translation="MEKIARLFRNGRNQAVRLPVEFEFDAEQVYVSKKENGDILLSLR
                     SRNTEHWQRLFELLPAVVCDETFLDTKERNQSFEQRDPFEVA"
     gene            complement(2310..2522)
                     /locus_tag="PXD69_002574"
     CDS             complement(2310..2522)
                     /locus_tag="PXD69_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL6284710.1"
                     /translation="MRDEYDFSNAVKNPYAKGLKSKSVVTIRIEDDVISYFKQLAEEV
                     NLPYQTLINLYLKDCVEQKRKPTISW"
     gene            complement(2523..>2793)
                     /locus_tag="PXD69_002575"
     CDS             complement(2523..>2793)
                     /locus_tag="PXD69_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL6284711.1"
                     /translation="FEWDSEKALRNQQKHGVSFIEAVSVFYDNNAMLIPDPDHSSREE
                     RFLLLGRSNKDNLLVVVHCERNTNIRIISARLATKRESGQYKGVH"
BASE COUNT          797 a          663 c          520 g          813 t
ORIGIN      
        1 gcgtctaccg attccgccac tcgggcagca cgatatagaa aaattggagc gggaaacgag
       61 gctcgaactc gcgaccccga ccttggcaag gtcgtgctct accaactgag ctattcccgc
      121 atttaaaaac gctacgaacc tcgtagagtc tcaacaggtg catattctat ggatttcaga
      181 tttaatgtca aataaatttg taggaaatct gtaaaaaatc gtttaattgg tgaaaaataa
      241 cgctttttgc aaatttttca tcaaatttga ccgcttgcag ccgccttatt tgttgaaatc
      301 ataatcagca aatttccgac aaatatcaat tacaactttt gtggcttttt ccatcgtatc
      361 aaccgaaata aactcaaatc gtccgtggaa attttcgccg ccggtaaata aattcgggca
      421 aggcaagccc ataaatgaaa ggcgtgagcc atcagtaccg ccacggatcg gttctaaatt
      481 cggctcaatg ccttgttcac gcattgcgtt ttcggcaatt tcaaccaagt agccgtaatc
      541 gtccagcact tcacgcatat tgcgatattg ctcgacaatc tcgacttttc cgcaatgttc
      601 gccgtaaatc tgttgcatct ctgccagcgt atcattcagc attttgccga atgcagctaa
      661 ttcatcacgc tcaaagctac gtaaaatata gtgaatttcc gctttatcaa ttccaccctc
      721 aatgccgtgc aacataataa agccttcacg cccttcgctg gtggcagggg ttaaatgggg
      781 aggcagacgg tgttggaact cgcaagctcg ctctaaggcg ttgatcatct tgccctttgc
      841 cgtgccgggg tgaacgctac gcccgaagaa cgtaacggtc gctgcatcgg cattgaaatt
      901 ttcatattgc aattcgccca gaggcccgcc atcaaaggta aaggcgacat cggcaccgaa
      961 tgcgtttaca tcaaaatgat ctgcgcctcg accgatctct tcatcggtgg taaagccgat
     1021 gcggatcttg ccgtgcggaa tatgcggatt ggcttgtaaa tactcgatag ccgagagaat
     1081 aatcgcaatg ccggatttgt cgtctgcgcc aagcaaagag gtgccgtcag tggtgactaa
     1141 ggtgtcgcca atcagcttgt ttaaattcgg gaaatccgtt ggcgaaagat aatcgccact
     1201 gccgtttagc aaaatattgc cgccttgata agcctcaatc acctgtggtt tcacgttttc
     1261 accattaaaa tcgggcgaag tatcaacgtg ggcaatcagc ccaagcaccg gcagggtttt
     1321 gtcaatattg gcaggcaagc tggcgaacag atagccgttg gggtcaagat aaatctcgct
     1381 tagccccatc gcctctactt ccgttttcag cagatgaagc aaatcccact gctgttgcga
     1441 gcttggcaca gtttggcttt tcggatctga agttgtgtga atttgggtgt aacgtagtaa
     1501 acggttaaga agggattgtt tcattgtttt tccttactat agtttagtgt aaccaattct
     1561 ccaatttcag atcaggtacc attttaaatg cctgatcact agaaactaaa atacactctt
     1621 cagcaagagc gtgactagca atcatttgat cctgcacgcc cattactttg ccatttttct
     1681 ccatctctgc ccgtaacttt ccataaagtt cagcacaacg ataattccaa tctaaaacct
     1741 ttacactcga taaaaaataa tctaaaaatt gagaaagctg cccattattt cttttcgcca
     1801 caccataaac caattcagca gcagttacag atgaaataca aagcctctca ggattaatgg
     1861 acttcaattt cgccaccaca tttgcatttc cacgaaaaaa atagcttaca gtattcgtat
     1921 ctaacatata catttaagct acctcaaaag gatcccgttg ctcaaaggat tggtttctct
     1981 cttttgtatc taaaaatgtt tcatcacata caacagcagg caatagctca aacaatcgtt
     2041 gccaatgctc ggtatttctc gatctcaatg ataataaaat atcgccattt tcttttttag
     2101 aaacatagac ttgctctgca tcaaactcaa attcaaccgg taaacgcact gcttggttcc
     2161 gcccgttacg gaataatctc gcaatttttt ccatcttact ttaccctccg atagatagtg
     2221 tatatgccaa agtatatgcc tattttatac aactggcaag ataacccatt ctcaaatact
     2281 caataacata ctgatttcaa atcataatat taccaactaa tagtcggttt acgtttctgc
     2341 tcaacgcaat ctttcaaata aagattgatc aacgtttggt aaggcaaatt cacctcttcg
     2401 gcaagttgtt taaaatagct gataacatcg tcttcaatcc gaatagtaac cacacttttg
     2461 ctttttagcc cttttgcgta agggtttttc actgcattag aaaaatcgta ttcatctctc
     2521 atttaatgta ctcctttata ttgcccactt tcgcgttttg ttgccaaacg tgctgaaata
     2581 atccgaatgt tggtatttct ctcgcaatgc acaaccacaa gtagattatc tttattgcta
     2641 cgcccgagta gcaaaaaacg ctcttcccta gatgagtgat ctggatccgg gattaacatc
     2701 gcattattat cataaaatac gcttaccgcc tcgataaaac taactccgtg tttttgttga
     2761 ttacgaagag ctttctcact atcccattca aaa
//
LOCUS       DANLXO010000168         2751 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.172, whole genome shotgun sequence.
ACCESSION   DANLXO010000168 DANLXO010000000
VERSION     DANLXO010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.172"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..1043
                     /locus_tag="PXD69_002576"
     CDS             <1..1043
                     /locus_tag="PXD69_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDL6284712.1"
                     /translation="QKQYTPFSAIMQKNLMDLLTKSARSPYSFSTVAKSTAGRENPEL
                     HNTANSSTPLTRAIFIRSLHTPKERRNKACSSMVACSGQGSPLAVFGSPFVAVFSPRY
                     TLSPCTVRSVADSPLKLTNGLQKMNPSQITGKNRLNSFLFNNNQNDYSLLFTNAKQST
                     PISAKISKNQDLCLTTLNRSPYASRAFAKSKAECGNSKEHQANNSTPLTRAFFVRSSR
                     TPKECQNKACSSMVACSGQGFALDCLPDVAVFHPVTRYRPTLWKMLAIAPKNQHQELS
                     KMKAFAYSFLCAIRTPETDTYQETVVRIISDSEQNARFQLTADYRLLLPRPVAKIRLN
                     STAYTVKGGIYA"
     gene            1036..1200
                     /locus_tag="PXD69_002577"
     CDS             1036..1200
                     /locus_tag="PXD69_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284713.1"
                     /translation="MLNYSDIEQIRYFMDQAEEALDNNEEFKAVAELNTAQQFILALL
                     MNYEQGGENE"
     gene            1193..1828
                     /locus_tag="PXD69_002578"
     CDS             1193..1828
                     /locus_tag="PXD69_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284714.1"
                     /translation="MNNTTGQATQRNWQEIIANLQRLSESGESTIEIAKRYEAFSKTA
                     EQIQALVNNNGSEAEKEAFFAPVERFYLGLLETETRLKDAIAKDEENAQKLKEQKAAR
                     EAEQKRWDNLPFYAKDKFSDLICIESRETLEDKFFAISCMFDALKAVPNLLEIGLREE
                     GKDSVIDRLAEMSKLYLLFVDEQFSLLANEIQSGKYGKLDLNGSQNKGDLC"
     gene            1822..2040
                     /locus_tag="PXD69_002579"
     CDS             1822..2040
                     /locus_tag="PXD69_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284715.1"
                     /translation="MLTHRITLPDGTEIEFFAETDKETFAEIQRDLEGLKLPTFAEFV
                     AQERKKHRAKQAVKKARKIAKLARRKNR"
     gene            2182..2667
                     /locus_tag="PXD69_002580"
     CDS             2182..2667
                     /locus_tag="PXD69_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284716.1"
                     /translation="METALQLAQHLTGWTEEENSQAILKNFLDWKETFGEKTREETKI
                     VETLLDWINENEASFIEYPFNQEQRTPPKVAGYRILANNSTKTNEYFFIYPKQFKETL
                     AEFPLLMACTKLHEAGILHKPPRPEKGYEFQYTIAPKITGGSKKRAYKIVPIALEEEN
                     E"
BASE COUNT          971 a          590 c          534 g          656 t
ORIGIN      
        1 atcagaaaca atatacgcca ttttcggcta taatgcaaaa aaatttaatg gatttattga
       61 caaaatccgc ccgttcgcct tattctttct ctaccgttgc aaaatcaacg gcagggcgtg
      121 agaaccctga actacataat acggcgaaca gtagcacgcc tttaacccgt gctattttta
      181 ttcgtagctt acacacacct aaagaacgcc gaaataaggc gtgttcgtct atggtagcgt
      241 gtagcgggca aggttcgccc ttggctgttt ttggttcgcc gtttgtagca gttttctcac
      301 cccgttacac gctatcgccc tgcaccgtga gaagtgtagc cgatagtcct ttaaaattaa
      361 caaacggact acaaaaaatg aaccctagcc aaattacagg caaaaaccgc ctaaactctt
      421 ttctatttaa caataatcaa aatgattatt cgctattatt tactaatgca aaacaatcaa
      481 ccccgatttc tgctaaaata agcaaaaatc aagatttatg cttgacaacc ctcaatcgtt
      541 cgccttatgc tagccgtgct tttgcaaaat caaaagccga gtgtggaaac tcgaaagaac
      601 atcaggcgaa caatagcacg cctttaactc gtgctttttt tgttcgtagc tcacgcacac
      661 ccaaagaatg ccaaaataag gcgtgttcgt ctatggtagc gtgtagcggg caaggtttcg
      721 cccttgactg cttacctgat gttgcagttt tccaccccgt tacacgctat cgccctacat
      781 tgtggaaaat gttagcgata gcccctaaaa atcaacatca ggagctatca aaaatgaaag
      841 cattcgctta ttcattcctt tgtgctattc gcacacccga aacagatact tatcaagaaa
      901 ccgtagtacg cattatttca gacagcgaac aaaacgcccg ttttcagctt acagccgatt
      961 atcgcttact actcccccgc cctgttgcaa aaatccgcct aaattctacc gcttacacgg
     1021 tgaaaggggg gatttatgct taattattcc gatattgaac aaatccgcta ttttatggat
     1081 caagccgaag aggctttaga caataatgaa gagttcaaag ccgtagcaga acttaacaca
     1141 gcacaacaat ttattctggc tttattaatg aactacgaac aagggggtga aaatgaataa
     1201 tacaacagga caagctacgc aaagaaactg gcaagaaatt atcgctaatt tgcagagact
     1261 cagcgaatcc ggggaaagca caatcgaaat cgctaaacgc tatgaggcat tttctaaaac
     1321 cgccgagcaa atccaagccc tagtgaataa caacggcagc gaagccgaaa aagaggcgtt
     1381 ttttgcccct gttgagcgtt tttatcttgg cttactagaa accgaaacac gcttaaaaga
     1441 tgccatagcc aaagacgaag aaaacgccca aaaattgaaa gagcaaaaag cagctagaga
     1501 ggcagagcaa aaaagatggg acaacctacc tttctacgcc aaagacaaat tcagtgattt
     1561 aatttgcatt gaaagccgag aaacgcttga agataaattc tttgcgatct cttgtatgtt
     1621 cgatgcccta aaagccgtac ctaatctatt agaaataggc ttgcgtgaag aaggcaaaga
     1681 cagtgttata gaccgattag ccgaaatgag caaactctat ttactgtttg tagatgagca
     1741 attttcacta ctggcaaacg aaattcaaag cggtaaatat ggcaagttag acctaaacgg
     1801 ctcacagaat aagggggatt tatgctaacg caccgcatta cactccctga cggcacagaa
     1861 attgaatttt ttgcagaaac cgacaaagaa acatttgcag aaattcaaag ggacttagag
     1921 ggcttgaaat tgccaacctt tgccgagttt gttgcccaag agcggaaaaa acaccgagca
     1981 aaacaagcgg tcaaaaaagc ccgaaaaatt gcaaaattag caagacggaa aaaccgctag
     2041 cacctatcaa aaagacttat tattgcagaa aatcacgctt taataaaaac gacctataaa
     2101 gcaatccgca agaaatggtt aagtttaact gaaaatatga gcggacaggt tcagcgggta
     2161 gcgtgcgata gattcgcaat aatggaaacc gccttgcagt tagcccaaca tttaacaggc
     2221 tggacagagg aagagaacag ccaagcgatt ttaaaaaact tcctagactg gaaagaaact
     2281 ttcggcgaaa aaacaagaga agaaactaaa atagtagaaa ccttgctaga ttggataaat
     2341 gaaaatgagg cgagttttat cgagtaccca ttcaaccaag agcaaagaac accgcctaaa
     2401 gttgccggct atagaatact tgcgaataac agcactaaaa caaatgagta ctttttcatt
     2461 taccctaagc aatttaaaga aacgctggca gaatttccgc tattgatggc ttgcaccaag
     2521 ttacacgagg cagggatttt acataagcca ccacgcccag aaaaaggcta tgaatttcag
     2581 tacacaatag cccctaaaat aacaggaggg agcaaaaaaa gagcttataa aatcgtaccg
     2641 atagcattgg aagaagaaaa cgagtaatta cagcaaaagc aagagtttca attcttgctt
     2701 tttttatact tcaaacaaaa taaaaataaa tacaaattaa aaatttatag g
//
LOCUS       DANLXO010000169         2744 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.173, whole genome shotgun sequence.
ACCESSION   DANLXO010000169 DANLXO010000000
VERSION     DANLXO010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.173"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            310..1785
                     /gene="msr(E)"
                     /locus_tag="PXD69_002581"
     CDS             310..1785
                     /gene="msr(E)"
                     /locus_tag="PXD69_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000052512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein Msr(E)"
                     /protein_id="HDL6284717.1"
                     /translation="MSLIIKARNIRLDYAGRDVLDIDELEIHSYDRIGLVGDNGAGKS
                     SLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLGVSNVQNDTMSG
                     GEETRAKIAAAFSQQVHGILADEPTSHLDLNGIDLLIGQLKAFDGALLVISHDRYFLD
                     MVVDKIWELKDGKITEYWGGYSDYLRQKEEERQHQAVEYELMMKERERLESAVQEKRQ
                     QANRLDNKKKGEKSKNSTESAGRLGHAKMTGTKQRKLYQAAKSMEKRLAALEDIQAPE
                     HLRSIRFRQSSALELHNKFPITADGLSLKFGSRTIFDDANFIIPLGAKVAITGSNGTG
                     KTSLLKMISERADGLTISPKAEIGYFTQTGYKFNTHKSVLSFMQEECEYTVAEIRAVL
                     ASMGIGANDIQKNLSDLSGGEIIKLLLSKMLLGKYNILLMDEPGNYLDLKSIAALETM
                     MKSYAGTIIFVSHDKQLVDNIADIIYEIKDHKIIKTFERDC"
     gene            1841..2725
                     /locus_tag="PXD69_002582"
     CDS             1841..2725
                     /locus_tag="PXD69_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mph(E) family macrolide 2'-phosphotransferase"
                     /protein_id="HDL6284718.1"
                     /translation="MTIQDIQSLAEAHGLLITDKMNFNEMGIDFKVVFALDTKGQQWL
                     LRIPRRDGMREQIKKEKRILELVKKHLSVEVPDWRISSTELVAYPILKDNPVLNLDAE
                     TYEIIWNMDKDSPKYITSLAKTLFEIHSIPEKEVRENDLKIMKPSDLRPEIANNLQLV
                     KSEIGISEQLETRYRKWLDNDVLWADFTQFIHGDLYAGHVLASKDGAVSGVIDWSTAH
                     IDDPAIDFAGHVTLFGEESLKTLIIEYEKLGGKVWNKLYEQTLERAAASPLMYGLFAL
                     ETQNESLIVGAKAQLGVI"
BASE COUNT          937 a          441 c          574 g          792 t
ORIGIN      
        1 aaaataagcc ttatatccaa gcataaaaca aggttgtcta gacttctttt aacagtaaag
       61 ttatcataaa actgaatttt attttttagg taagtttatg cattctatcc gcattcgtta
      121 agacacaact atttgcatag tgacactatt ttataatggt gggcttttgt tgtgtcttta
      181 agaatatatg cggatatata aagtaaaagt atgcttaatt tataagtatg cttttagtgc
      241 atagtttcca gttataactt aattgactag ctattaaaaa tttcaagagc taaacaggag
      301 taaataaaaa tgagtttaat tattaaagcg agaaacatac gcttggatta tgctgggcgt
      361 gatgttttgg atattgatga attggaaatt cactcttatg accgtattgg tcttgtgggt
      421 gataacggag caggaaagag tagtttactc aaagtactta atggcgaaat tgttttagcc
      481 gaagcgacat tacagcgttt tggtgatttt gcacatatca gccaactggg cggaatcgaa
      541 atagaaacgg tcgaagaccg ggcaatgtta tctcgccttg gtgtttccaa tgtacaaaac
      601 gacacaatga gtggcggaga ggaaactcgt gcaaaaattg ctgccgcatt ttcccaacaa
      661 gtacatggca ttctagcgga tgaaccaacc agccaccttg atctcaatgg aatagatcta
      721 cttattggtc aacttaaagc atttgatgga gcattacttg ttatcagtca tgaccgatat
      781 tttcttgata tggttgtaga caagatatgg gagttaaaag acggtaaaat tacggaatat
      841 tggggtggtt actcggatta cttgcgtcaa aaagaagaag agcgacaaca ccaagccgta
      901 gaatatgagc tgatgatgaa ggaacgggag cgattagaat ctgctgtgca agaaaaacgc
      961 cagcaagcta atcgattaga caataagaaa aaaggagaaa aatccaaaaa ctctaccgaa
     1021 agtgctggac gacttgggca tgcaaaaatg actggcacca agcaaagaaa actgtatcag
     1081 gcagctaaga gtatggaaaa gcgtttggct gcattagaag atattcaagc accagagcat
     1141 ttgcgttcta ttcgttttcg tcaaagttca gccctagaac tgcacaataa gttcccgatt
     1201 acggcagatg gtctgagctt aaaatttggt agccgtacta tctttgatga cgctaacttt
     1261 ataataccgc ttggcgctaa agtcgctata actggatcga atggaacagg gaaaacgtcc
     1321 ttgttaaaaa tgatatcaga acgtgctgat ggattaacca tatctccaaa agctgaaatt
     1381 ggctacttta cacaaacagg atataaattt aacacgcata aatctgtgct ctcctttatg
     1441 caggaagagt gcgagtacac agttgcggaa attcgtgcag tattggcttc aatggggatc
     1501 ggagcgaatg atattcaaaa aaacttatcc gacttatcgg gaggtgaaat catcaaactg
     1561 cttttatcca aaatgctttt aggaaaatat aatattttgc ttatggatga accaggaaac
     1621 tatcttgacc taaaaagtat tgccgcatta gaaacaatga tgaagtccta tgcaggaact
     1681 attatcttcg tatctcatga caagcaattg gtcgataata ttgctgacat tatctacgag
     1741 atcaaagacc acaaaatcat caagactttt gagagagatt gttaatgata gccaatctaa
     1801 tccgaacatt aattattgaa ctctttaaag gaaattaaaa atgacaattc aagatattca
     1861 atcacttgct gaagcacacg gcttgttgat tacggacaaa atgaatttca atgaaatggg
     1921 cattgatttt aaggtcgttt ttgctcttga tacaaagggg caacaatggt tgctgcgtat
     1981 tcctcgtcgt gatggcatga gggaacaaat caagaaagaa aaacgcattt tagaattggt
     2041 aaaaaaacat ctttctgtag aggttcctga ttggagaatt tcatctacag aattagtggc
     2101 ttatcccata cttaaagata atcctgtttt aaatttggat gctgaaacct atgaaataat
     2161 ttggaatatg gacaaagata gcccgaaata cataacatct ttggcaaaaa ccttatttga
     2221 aatccatagt attcctgaaa aagaagttcg ggaaaatgat ttgaaaatta tgaaaccttc
     2281 agatttaaga cctgaaatag caaacaattt gcagttagta aaatctgaaa ttggtataag
     2341 tgagcaattg gaaacccgct acagaaaatg gttggataat gatgttctat gggcagattt
     2401 cacccaattt atacatggcg atttatatgc tgggcatgta ctagcttcaa aggatggagc
     2461 tgtttcaggc gttattgatt ggtcaacagc ccatatagat gacccagcga ttgattttgc
     2521 tgggcatgta actttgtttg gagaagaaag cctcaaaact ctaatcatcg agtatgaaaa
     2581 actagggggt aaagtttgga ataaactata tgaacagact ttagaaagag cagcggcctc
     2641 tcctttgatg tatggtttat ttgccttaga aactcaaaat gaaagcctta tcgttggagc
     2701 aaaagctcag ttgggagtta tataatttaa aaatatgatt gctg
//
LOCUS       DANLXO010000170         2744 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.174, whole genome shotgun sequence.
ACCESSION   DANLXO010000170 DANLXO010000000
VERSION     DANLXO010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.174"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1262)
                     /locus_tag="PXD69_002583"
     CDS             complement(<1..1262)
                     /locus_tag="PXD69_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDL6284719.1"
                     /translation="MSIQQKKRHSRWYERIFFSTAVQSILGVMFSSVLPAIYFWGEKF
                     NSIETRSNTIIATSLAFVMIAISLRVLMKYPGNKSASFVFSTVISWYAVLLIVLTIFR
                     FDYSNTLLGTSFILTILFCFIGYFLSRSWIIPKIALVPFGRAINLNRIQNVEWIQLSE
                     PILGEKRINSIAVDLHYPDLSAEWHKFLAKCTLNGIPVYNVRQLEESLTGRVKIRHMY
                     ENDLGSLLPSPIYSLVKRIIDIALIVATFPITLPIMTITAIAIRLESEGGAMFIQKRV
                     GQGGKEFNIYKFRSMCKDSEKDDAQFASSADMRVTRIGKFIRKTRIDELPQFFNVLKG
                     DMSLIGPRPEQTAFVDKFEEEIPFYNYRHIVKPGISGWAQVVQGYAADVDDTKVKVEH
                     DFYYIKHFSLWLDILIIFKTLKTMLTGFG"
     gene            complement(1266..2074)
                     /locus_tag="PXD69_002584"
                     /pseudo
     CDS             complement(1266..2074)
                     /locus_tag="PXD69_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            complement(2077..>2744)
                     /locus_tag="PXD69_002585"
     CDS             complement(2077..>2744)
                     /locus_tag="PXD69_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL6284720.1"
                     /translation="RMDADDISLPTRLSEQILYLEENHLDLCGCNALLFSEHGNLGLT
                     NKLNSHEALEKLMVAGDIGIIHPTFLARRKVFVESGGYNPLALHAEDMEFIAHILSMG
                     FRLGNNPKVLFKYRFSTNSVTRRNAFHLYTTISNINKAYKSFKNGGDYIFVNSIKFNK
                     IKEERYSMNKILMTEAREKLVRKNYFGFLYKIILSFIYSPKLFYHTIKITYIVHKLKK
                     WEK"
BASE COUNT          958 a          527 c          379 g          880 t
ORIGIN      
        1 ccaaatccag ttagcattgt tttcaatgtt ttaaaaataa ttaaaatatc aagccataaa
       61 gaaaaatgct taatatagta gaagtcatgt tctactttta cttttgtatc atcaacatct
      121 gccgcataac cttggacgac ctgagcccaa ccggaaatac ccggtttaac gatatggcga
      181 taattataga atggaatttc ctcttcaaat ttatctacaa aggctgtctg ttctgggcga
      241 ggaccaatta agctcatatc accttttaat acattaaaaa actgaggtag ctcatcaata
      301 cgagttttac ggataaattt cccaatacga gttaccctca tatccgcact cgaagcaaac
      361 tgtgcatcat ctttttcgga gtctttacac atactacgaa atttataaat attaaactcc
      421 tttccacctt gcccaacgcg tttttgaata aacattgctc caccttcact ttctaagcga
      481 atagcaatag cggtgattgt cataataggt aaagtaatgg gaaacgtagc aacaatcaat
      541 gcaatatcaa tgatacgctt cactaatgag taaattggag aaggaagtaa tgaacctaag
      601 tcattttcat acatatggcg aattttgaca cgcccggtta aagattcctc aagctggcga
      661 acgttatata caggaatacc attcaatgta catttcgcta aaaatttatg ccattctgcg
      721 gacaaatcag gatagtgtaa atctaccgca atagagttaa ttctcttttc ccccaatatt
      781 ggttcactta attgaatcca ctctacattc tgaattcggt tcaaattgat agctcttccg
      841 aatggaacca aagcgatttt agggataatc caacttcttg aaagaaaata accaataaaa
      901 caaaatagaa ttgtgagtat aaagctcgta cctagcaatg tattagaata atcaaatcta
      961 aatattgtta acacgattaa taaaaccgca taccaagaaa taacggtgga aaaaacaaaa
     1021 cttgctgact tattacctgg atatttcatt aacactctta agctgatagc tatcattaca
     1081 aaggcaagag aagtcgctat aatcgtatta gaacgagttt caatagaatt aaatttctct
     1141 ccccaaaaat agatagcggg taagacactt gagaacataa cgcccaaaat actttgaaca
     1201 gctgtactaa aaaagatacg ttcataccaa cgagagtgtc ttttcttttg ctgaatgctc
     1261 ataatttatc cttttcttaa tttcttataa agtcttccta aaagagatct aggcaataac
     1321 cgtggtaagg ctctaagtat aaaaaacatg cttgatgaga ttattgattg taatcccaac
     1381 tcttttttca attttgctaa ttggtactca ctcttaatgt aattccaccc tttacgccga
     1441 gcgtacattg cagaacctga acgaacattt accagtacat ctggtaaatt atacacctca
     1501 tatttctgtg taataactcg taaccataaa ttgtaatctt ccatataaag atgatgctga
     1561 tagcctccaa catgctcgat cacagatttt ttataggcta ctgccatatg gttaaaagga
     1621 tttcttagta atgctgaaat acgaatttca tcatcattaa tgggcacttg ttttataccc
     1681 agagaattag acattgtttc gtcaaattct tcaacttgtc cccccaataa aaccacatca
     1741 ggatttttac taataaaatc aatttgcttt tcaaatcgag atggtaagca aatatcatca
     1801 gtatccattc taaacaccca ctcattagag cagtgtttta agccttcatt taaggccggc
     1861 ctaaacccac attttgtggt aaactaacaa caacaagcgg taatttttca gtaaaatgtt
     1921 gcacaattcg ctctaaatct ccaggaatta taccatcaaa aaccacaaca atttcacttg
     1981 ctggtaaagt ttgggatact aaagaatcta aacacatctc taaataagct ggtttttctt
     2041 tataatacaa agatattaat atcgaaaact tcacaactac ttttcccact ttttcaactt
     2101 atggactata tacgttattt ttatagtatg ataaaaaagt tttggagagt aaataaaaga
     2161 caatataatc ttatataaga aaccaaagta atttttccta acaagctttt ctctagcctc
     2221 agtcattaaa attttattca tagaatatcg ttcttctttt attttattaa attttattga
     2281 atttacaaat atataatcgc ctccattttt aaaactctta tatgctttat ttatattact
     2341 tattgtggta tataaatgaa aagcatttct tctagtaacg ctatttgtag aaaacctata
     2401 tttgaataat accttaggat tattccctaa tctaaatccc attgataaaa tatgggcaat
     2461 aaattccata tcttccgcat gtaaagctaa gggattatac cctccagatt caacaaatac
     2521 ttttctcctt gctaaaaaag tagggtgaat tattccaata tcaccagcca ccataagctt
     2581 ttctaaagcc tcatgactat tcaacttatt tgtaagacca aggttgccat gttcagaaaa
     2641 aagcaaagca ttacaaccgc ataagtctaa atggttttct tctaaatata aaatttgctc
     2701 tgacaatcta gtaggtaaag atatatcatc agcatccatt ctcg
//
LOCUS       DANLXO010000171         2701 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.175, whole genome shotgun sequence.
ACCESSION   DANLXO010000171 DANLXO010000000
VERSION     DANLXO010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2701
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.175"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..2478
                     /gene="hrpA"
                     /locus_tag="PXD69_002586"
     CDS             <1..2478
                     /gene="hrpA"
                     /locus_tag="PXD69_002586"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDL6284721.1"
                     /translation="TSPRKRGDGFRLTPIGRQLAQLPVDPRLGRMVIEAAKNGSLHEV
                     MMIVSALSIQDPRERPQEKQQSADDKHRRFADKESDFLAFVNLWHFIQAQQKELSKNQ
                     FRNLCRKDYLNYNRVREWQDIYHQLRLAVREMGLKINSEPASYQPIHTALLAGLLSHI
                     GLKDNEKMHYLGARNAHFFIFPNSALFKKQPKWVMAAELVETTKLWGRMVARIEPEWV
                     EPLAVHLTKSSYSEPHWAKSKGAVMASEKVSLYGIPIVAQRSVNYGSIDPTVSREIFI
                     RSALVEGECHNNYKFFKENHRLIREVEALEHKSRRRDILVDEQVLFEFYDQRIGTEVV
                     SSKHFDTWWKQASKKDPELLNFEKSFLINDNANLASELDFPNFWHQGDLKLKLSYQFE
                     VGKDHDGVTVHIPLPLLNQVEPEGFDWQIPGLRHELIVSLIKSLPKSLRRNFVPAPNY
                     ADAFLGRAEPFKKPLLDNLSHELRRMTGVLVEPEQWDLSQLPPHLRMTFRVIDDKGKK
                     LQESENLDELKFALKDEVQNTLSNIADDGIEQSGVHIWNFAELPQFYEQKKAHFSVKA
                     YPAIVDEQTAVGVKLFETEFEQARAMQAGLRRLLLLNVPSPIKYLHEKLPNKAKLGLY
                     FAPFGKVLELIDDCIACAVDQLVEEFGGFVWTEEKFTQLHEFVRANLNDKTVEIAKQV
                     EKCLTLAYELNKRLKGKLDFTMAFALSDIKTQIEGLIYPDFVTKTGYARLADLYRYLT
                     AIERRLDKLLVDSNTDRAKMLRVEAVQEAYKQLLAKLPKSKAVPDEVLEIRYMIEELR
                     VSLFAQQLGTKYPISDKRILNVINEIK"
BASE COUNT          791 a          612 c          651 g          647 t
ORIGIN      
        1 acctcccccc gtaaacgggg ggatgggttt agattaaccc caatcggtcg ccaactcgcc
       61 caactgccag tcgatcctcg cttaggcaga atggtgatcg aggcggcgaa aaacggttcg
      121 ttgcacgaag tgatgatgat tgtgtcagct ctctcaatcc aagaccctcg tgagcgtccg
      181 caggaaaaac agcagtcggc agacgataaa caccgccgtt ttgccgataa agagagcgat
      241 ttcttagcct ttgtgaattt gtggcacttt atccaagccc aacaaaaaga actgtcgaaa
      301 aaccagttcc gtaatctctg ccgtaaggat tatttgaact acaaccgtgt gcgggagtgg
      361 caggatatct accaccaact ccgccttgca gttagagaaa tgggcttaaa aattaacagt
      421 gagccggcaa gttatcagcc gattcacacc gccctgctcg ccggcttgtt gtcgcatatc
      481 ggcttgaaag ataatgaaaa aatgcactat ttaggagcaa gaaatgccca ctttttcatt
      541 ttcccgaact cggcactttt caaaaaacag ccgaaatggg taatggccgc agagctggtg
      601 gaaactacca aactttgggg acgaatggtc gctcgcattg agccggaatg ggtggaaccg
      661 ttggcagtac acctcactaa atccagttac agcgaaccac actgggcgaa gtcaaaagga
      721 gcggtaatgg catcggaaaa agtgtcgctc tacggcattc cgattgtggc acaacgctcg
      781 gtgaattatg gctcgataga cccaaccgtc agccgtgaga tttttatccg ctcggcgttg
      841 gtggaaggcg aatgtcacaa caattacaaa tttttcaaag aaaatcaccg cttgatccgt
      901 gaagttgagg cattggaaca caaatcccgc cgccgtgata ttttggtgga cgagcaggtg
      961 ctgtttgagt tttacgatca gcggattggc accgaagttg tgtcgagcaa gcattttgat
     1021 acttggtgga aacaggcaag caaaaaagat cctgaactgc tgaactttga aaaatcgttc
     1081 ctgatcaacg acaacgccaa ccttgccagc gagctggatt tcccgaattt ctggcatcaa
     1141 ggcgatttaa aactcaaact gagctatcag tttgaggtcg gaaaagatca cgatggcgtg
     1201 acggtgcata ttccgctacc gctgcttaac caagtggaac ccgaaggttt cgattggcaa
     1261 attccggggc tacgccacga gctgatcgtc tcgctgatta aatctttacc gaaatcgcta
     1321 cggcgaaatt ttgtgccggc gccgaattat gcggacgcct ttttagggcg agccgagccg
     1381 tttaaaaaac cgttgctgga caatctaagc cacgaactac gccgaatgac gggtgtattg
     1441 gtcgagcctg aacagtggga tttaagccaa ctgccgccac atttgcggat gactttccgt
     1501 gtgattgatg ataaaggcaa gaaactgcaa gagagcgaaa accttgatga gctgaaattt
     1561 gccttgaaag atgaggtgca gaacaccctt tccaacattg ccgatgacgg cattgagcaa
     1621 agtggtgtgc atatttggaa ttttgccgaa ttgccacagt tctatgagca gaaaaaagcc
     1681 catttcagcg tgaaagccta ccctgcgatt gtcgatgaac aaacggctgt gggggtgaaa
     1741 ctgtttgaaa cggaatttga gcaggctcgt gcaatgcagg caggacttcg ccgtctgctg
     1801 ttgctaaatg tgccatcgcc gattaaatat ctacacgaaa aactgccgaa caaagccaag
     1861 ctgggcttat attttgcccc gttcggcaaa gtattggagc tgattgacga ctgcattgcc
     1921 tgtgcggtag atcagctggt agaagagttc ggcgggtttg tctggacgga ggaaaaattc
     1981 acccaactgc acgaatttgt gcgggcaaat ttaaacgata aaaccgtaga aattgccaaa
     2041 caggttgaaa agtgcctcac actggcctac gagctaaaca agcggttaaa aggcaagctc
     2101 gattttacga tggcgtttgc gttaagcgac atcaaaaccc aaatcgaagg gctgatttac
     2161 cccgactttg tcaccaaaac cggctacgcc cgccttgcag atttataccg ttatttgacc
     2221 gctatcgaac gccgtttgga taaactgttg gtggacagca acaccgaccg agccaaaatg
     2281 ctacgggtgg aagcagtgca agaggcatat aaacagctcc ttgccaaact gccaaaatcc
     2341 aaagcggtgc cggacgaggt actggaaatt cgatatatga tcgaagaact gcgggtcagt
     2401 ctgttcgctc aacagctcgg cacaaaatac ccgatttcgg ataagcggat tttgaatgtg
     2461 atcaatgaaa taaagtaata ttccctatac aacaagcggt cagataagta aaaaattttg
     2521 caactctgac cgcttgtttt ctcgaatacc tattcctctc gcttcagaag caaacctgct
     2581 acattttttt gattaaaaaa atctcaagat aaaaattaga aaactaaata tatcagaaag
     2641 tttgatcttt atcattaact agattattat tatttgtaat aaaaaattaa ctacgtaaaa
     2701 t
//
LOCUS       DANLXO010000172         2680 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.176, whole genome shotgun sequence.
ACCESSION   DANLXO010000172 DANLXO010000000
VERSION     DANLXO010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.176"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            139..579
                     /locus_tag="PXD69_002587"
     CDS             139..579
                     /locus_tag="PXD69_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL6284722.1"
                     /translation="MTACKNGLGFLVLRLFLAYEFFEAGLSKLNGENWFASIQESFPF
                     PFNVLPADLSWAIASGAEILLPILLTLGLFTRFSALGLMILTAVAWYAVHAGNGYNVC
                     NNGYKMALIYLVMLVPLLLQGAGSLSLDFLLQKKSPTKRWLKFL"
     gene            605..892
                     /locus_tag="PXD69_002588"
     CDS             605..892
                     /locus_tag="PXD69_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284723.1"
                     /translation="MKKATLMALAGALTMATATVNAETKSVKADACMEVKDGKCVKTK
                     ATEGKCGEGKCGATSSEPKATEGKCGEGKCGATAPKAAEGKCGEGKCGASK"
     gene            993..1916
                     /locus_tag="PXD69_002589"
     CDS             993..1916
                     /locus_tag="PXD69_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HDL6284724.1"
                     /translation="MLKFTGAGLGYRRDLADGFLSLTDNNIINFMEVAPENWLKMGGQ
                     ARYNFDKVAEKIPVIIHGLSLSLGGQAPLDMTLLKGIKNMQQQYNSFFFSDHLSYCEC
                     EGHLYDLLPMPFTDEAVHHVANRIKQVQDYLGMQISLENTSYYLHSPTSTMNEVEFLN
                     AIAQEADCGIHLDVNNIYVNGVNHGLLDPFVFIDQVDKSRVNYIHIAGHDEDHGAAED
                     VKMTEGESFNMVKGELRHLPTLLVDTHGEAVQKTVWDLLEYTYEHLPHIPPTLLERDF
                     NFPPFQELISEVQHIMSLQKKYAKTRLKNAA"
     gene            1906..2646
                     /locus_tag="PXD69_002590"
     CDS             1906..2646
                     /locus_tag="PXD69_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HDL6284725.1"
                     /translation="MPLKLVEEHKPLLKEIQAEFANAIRHNDVKLMSGNISPQRLGVY
                     SRLVRNNTLGFIDRCYVQLPQHLSPEEWVAVKEKFIREGKAHSPFFQDIAGEFLNFCR
                     ENGCMPPHLLELMDFENAQLLAEVSMATVPSEFEWDNDTIMQFSGAAELRQYAVNFIR
                     SEFKQFDFEPTNVLIWRDTEFGIYYNRLEELDFFLLSSLQEGANSLNGLLAELSEFTE
                     QNLELKALLRQLWEKWVEAEVIYPVYPE"
BASE COUNT          802 a          531 c          572 g          775 t
ORIGIN      
        1 ctataaaaat aggttataat ttttcacaca ttttttgtaa taaacgtata cttattctgt
       61 ctaataatca catttttagt taggagcatt tttatgtcat cattttcgtc atcattttca
      121 actcagtcag cttgctcaat gacagcttgt aaaaacggct tgggctttct tgtattacgt
      181 ctatttcttg cttatgaatt ttttgaagca gggttatcaa aactaaacgg tgaaaattgg
      241 tttgcctcaa ttcaagagag cttcccattc ccctttaacg tactaccagc cgatcttagc
      301 tgggctattg ctagcggagc ggaaatctta ctgcctattt tactcacttt gggtctgttc
      361 acccgcttca gtgcgttagg attaatgatc ttaacagcgg tagcgtggta tgctgttcac
      421 gctggcaatg gctacaatgt ctgcaacaat ggctataaaa tggcactcat ttatttagtg
      481 atgttagtac cacttttatt acaaggtgct ggctcgctct ctctcgattt tctgttacag
      541 aaaaaatccc caaccaaacg ctggttgaaa ttcctttaat cccttaattt atggagaatt
      601 tttaatgaaa aaagcaactt taatggcatt agctggtgca ttaactatgg caaccgcgac
      661 tgtaaacgct gaaactaaat cagtgaaagc agatgcttgt atggaagtaa aagatggcaa
      721 atgtgtaaaa accaaagcta cagaaggtaa atgtggcgaa ggcaaatgtg gagcaacctc
      781 ttctgagcca aaagcaaccg aaggtaaatg cggcgaaggg aaatgtggag caacggcacc
      841 aaaagcggca gaaggtaaat gcggtgaagg caagtgtgga gcttctaagt aagtagcgaa
      901 ggtgcgtttt ctaaacgcac ctaacctctt ataaacacaa tctacaagcg gttaaattcc
      961 gctgattttt tgcaaattaa aggaacaaga cgatgttaaa atttactggt gccggtctag
     1021 gctatcgccg tgacctagcg gacggatttt tatctctcac agataacaat ataattaatt
     1081 ttatggaagt agccccagaa aactggctga aaatgggcgg tcaggctcgg tataacttcg
     1141 ataaagtcgc tgaaaaaatc cctgttatta ttcacggttt atccctctct ctcggcgggc
     1201 aagcgccttt agatatgacg ctactaaaag ggatcaagaa tatgcagcag cagtataact
     1261 cctttttctt ctctgatcat ttaagctatt gcgaatgtga agggcattta tatgacctgc
     1321 tgccaatgcc gtttaccgat gaagccgtac atcacgtggc aaatcgcatt aaacaagtgc
     1381 aagattattt aggtatgcaa atttcccttg aaaatacgtc ctactatctg cattcaccaa
     1441 ccagtacgat gaatgaggta gagtttctca atgcaattgc ccaagaagcg gattgtggca
     1501 ttcaccttga tgtgaataat atttatgtta atggtgtcaa tcacggcttg cttgatccat
     1561 ttgtatttat tgatcaagtg gataaatctc gtgtcaatta tattcatatt gcaggccacg
     1621 atgaagatca cggtgcggcg gaagacgtta aaatgaccga gggtgaatca tttaatatgg
     1681 taaaaggcga actacgtcat ctgccaactt tactggtcga tacacacgga gaagctgtac
     1741 aaaaaactgt gtgggattta ctagagtaca cctatgaaca cctaccgcat attccaccaa
     1801 cactgttaga acgggatttc aacttcccac cgtttcaaga actgattagt gaagtacagc
     1861 acattatgag cttacagaaa aaatatgcaa aaacgaggct aaaaaatgcc gcttaaactc
     1921 gttgaagaac acaaaccgtt actcaaagag attcaagccg agtttgcgaa tgcaattcgc
     1981 cataacgatg taaagctgat gagtggtaat atctctccac agcggcttgg cgtctattct
     2041 cgcttggttc gcaataatac tctcggtttt atcgaccgtt gttatgtaca gctccctcaa
     2101 catctaagtc ctgaagaatg ggttgccgtt aaagaaaaat ttatacgaga aggtaaggct
     2161 cattcgccct ttttccaaga tattgctggc gaatttctca atttttgccg agaaaatggc
     2221 tgtatgccac cacacttgct tgagttgatg gactttgaaa atgctcaatt actggctgag
     2281 gtatcaatgg caaccgtacc atcagaattt gaatgggata acgatactat aatgcagttt
     2341 tctggtgcag ctgagctgcg tcaatatgcg gtaaacttta tccgtagcga gttcaaacag
     2401 tttgactttg agccgaccaa cgtactgatt tggcgagata cggaatttgg catctattac
     2461 aaccgcttgg aagagctgga tttcttcctg cttagctcgt tgcaagaggg ggcaaattcc
     2521 ctgaatggct tactagcaga actcagcgag tttaccgagc aaaatctgga gctaaaagcc
     2581 ttgttacgcc aactttggga aaaatgggtt gaagcagagg tgatttatcc tgtctatcct
     2641 gaatgaggat aaggtatgtg atatgtactg acatacatag
//
LOCUS       DANLXO010000173         2675 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.177, whole genome shotgun sequence.
ACCESSION   DANLXO010000173 DANLXO010000000
VERSION     DANLXO010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.177"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            346..621
                     /locus_tag="PXD69_002591"
     CDS             346..621
                     /locus_tag="PXD69_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6284726.1"
                     /translation="MAKATVARRIKNAINGNFGDHKSLAGTGGLYEMRIATGAGYRIY
                     YAQQGNVIYILLHGGDKSTQQADIEKAKALWAELKTTGESNGNNTNQ"
     gene            599..922
                     /locus_tag="PXD69_002592"
     CDS             599..922
                     /locus_tag="PXD69_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL6284727.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNNVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            1490..1738
                     /locus_tag="PXD69_002593"
     CDS             1490..1738
                     /locus_tag="PXD69_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HDL6284728.1"
                     /translation="MTATKKTLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLVEQSPQVFEQIARL"
     gene            1790..2377
                     /locus_tag="PXD69_002594"
     CDS             1790..2377
                     /locus_tag="PXD69_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HDL6284729.1"
                     /translation="MFDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGY
                     SISNDEYYSLPYGPVLSNTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTE
                     DEYFFDCLSESDTEILEEVFATFGNYKPFALVEYTHNPKYIPEWEDPQGRSKPISLST
                     LLTKLGKTPSEIESILEQQAEKGTMDNLFKGLGNA"
     gene            2370..>2675
                     /locus_tag="PXD69_002595"
     CDS             2370..>2675
                     /locus_tag="PXD69_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284730.1"
                     /translation="MLEIKRQVTILRPTNYGKEENHYKHLYILLTDPCFDGETGKGDM
                     ILSVNCSSIKDGKALDETCILKAGTHEFITRDSFIFYRHIKIDSLDEIKANIEAGYFI
                     "
BASE COUNT          960 a          493 c          510 g          712 t
ORIGIN      
        1 ggggcgatga acccttgaaa atcctagaat tgtcctattg tcctaattgt cctatacttt
       61 tttctatatt ttataaaagt gttttggaaa agtgattttt gataaaaatc caaatctacc
      121 caaattgtaa ttttatgcta cataatttaa aagcgtgaac aatgttcaat gatatgaata
      181 attgaaactg ctctcttttc aaaatttaac cacttgatta tttgtatctt aatggataca
      241 ctaagcaata aatagaataa gaggctggca atgacagagc aaaccactaa tcaaatcatc
      301 attaccgata atttttcaaa atagcttgag aatttaaaga accctatcgc aaaagcaacg
      361 gtagcaaggc ggataaaaaa tgcgattaat ggcaactttg gcgatcataa atctttagcc
      421 ggtacaggcg gactttatga aatgcggata gcaacaggag ccggatatag aatttattac
      481 gcacaacaag gaaatgtaat ttatatcttg ttacacggcg gcgataaatc aacacagcaa
      541 gccgatatag agaaagcgaa agcattatgg gctgaattaa aaactacagg ggaaagcaat
      601 ggaaacaata caaatcaatg aacaggcagc agaaaagcac ggtttacgcc cttttgacgt
      661 ggcggagttt ttaaccgatg aggcaactat tcaagcctat ttagcggaag tgttaaaaga
      721 gggcgaccaa gacgaatttt tagaagcctt gaacaatgtg gcaagggcaa ggggaatggc
      781 ggagcttgcc aagcaaacag ggctagggag agagagccta tataaaaccc tagccaaagg
      841 cagcaaacca cgctttgaca ctattcaaaa aattctaggg gcattcaatt tagtgcttat
      901 tccacaagtc aaaaatggct aaaacttatc acttgctacc tgccaaaacc tcacattcaa
      961 atagccgttg attgatatta acggcttttt tattgcttaa ttctgtacca attacgcacc
     1021 gattgcggat caatacgggg caagttttcg caaaacctta atgaaatatg accgcttgtg
     1081 attttgtaca aaacgacaca aaccaatgta taaaatcaaa acttgccaca aatggcggaa
     1141 tgatattaaa tgccccacaa actagcagta tttcttaatg acttttcatt ttaagggtac
     1201 atttaagggt atgtttaaca agtcttaaat gcacttctca ataataacaa gcctcatagc
     1261 atacaattca aactcggctg gggaccattt aagcgttgca tattgtcttt cactgtctca
     1321 aatttactat aaaatcaaga acttagatta ttttatagtc tcttattgtc ttctttagtt
     1381 gcattgtatc ttagcgttta tgatccctaa aatgatccct attttgaaaa cgggaaaatt
     1441 tagggatcat aaacttcgat aaacccttat atatcaagga ttagaagaaa tgactgcaac
     1501 taaaaaaaca ctttcagaca cattactaaa aaatcttaaa tattccccaa atgcgaagcc
     1561 tatcgcagac agtaacgggc tatttattct tgcacagaaa aaagcgaaag tatggattta
     1621 tagctatatc agccccaaaa caggcaagcg aagcacaaaa aatagaatcg gtagctatcc
     1681 gcaaatgagc ttagtggaac aatccccaca ggtatttgaa caaatcgcac gtctttaaaa
     1741 tattaaatta agagaaagca ctatttgcga tgtagcagga gataaaacaa tgtttgatga
     1801 attaaaaata gcccaagcga ccgcctattt gctacataag gcaggcggaa caatggagca
     1861 tattaaggta atgaaattgc tttatcttgc ggatcgctta tcgtggcaaa gatacggcta
     1921 ttctatttct aatgatgaat attattcatt gccttatgga ccggtattaa gcaacacact
     1981 caacctaatg cgaggagaag aagcgagctt ataccaaaaa accagtattt ggggcgagtg
     2041 gatagcagat aaggaagatc acaaaatcag ccttaaaaaa tccgtaaata ccgaagatga
     2101 atacttcttt gattgccttt cagagagcga caccgaaatt ttagaagagg tatttgcgac
     2161 ctttggaaat tataagccat tcgccctagt ggaatatacc cataacccta aatacattcc
     2221 cgaatgggaa gacccacaag gcagaagcaa gccgatttct ttaagcacgc ttcttactaa
     2281 gctagggaaa acgccaagcg agatcgaaag cattttagag caacaggcgg aaaaagggac
     2341 aatggataac cttttcaagg gcttaggcaa tgcttgaaat caaaagacaa gtaacgattc
     2401 ttagaccgac caactacggc aaggaagaga accactacaa gcatttatat attctgctta
     2461 ccgatccgtg ctttgatggt gaaaccggta aaggagatat gattttaagt gtaaactgct
     2521 caagcattaa agacgggaaa gcacttgatg aaacttgtat tttaaaggca ggaacacacg
     2581 aatttatcac acgggacagc ttcattttct accgccatat aaaaattgat tcgttagatg
     2641 agattaaggc aaatatagaa gccggttatt ttatt
//
LOCUS       DANLXO010000174         2671 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.178, whole genome shotgun sequence.
ACCESSION   DANLXO010000174 DANLXO010000000
VERSION     DANLXO010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2671
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.178"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            62..2410
                     /locus_tag="PXD69_002596"
     CDS             62..2410
                     /locus_tag="PXD69_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL6284731.1"
                     /translation="MLISAQFSPLVWAENNDVAVLDEVSVVGSTPSISQGSEVTLLKV
                     SDKIIAGKEFKKRSATLGNALASELGVHSNPFGGGASKPIIRGQEGARIRILQNGSDV
                     IDMSNLSPDHAVVADSLLADQVEILRGSSTLLYASSSPVGIVNVVDKRIPTAIPEKGY
                     EVELNSRFDTAAKEKVGALGATFGIGNHIAVRVEGLSRHSDNYRVPGINLGERLNYVP
                     DTYNKSKVGTLGLSFVGERGYIGASYSKRRDNYGLPGHNHKFDFCTGHIYGNKRDKYA
                     YTYLYPHLIGEENIGSNPHFHCGTNHAEDGTHSHDNPFGHAHDHTHKGPWVDLESKRI
                     DVKAELRQPFKGVDKIKASYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKN
                     RGKNTRLEVYHAPLGGLTGVWGVQYQTQKSSMNAPKDREVKFPLVENTNKQFSLFGVE
                     QYMWDSVAVELAGRMEKQKIEIEYDRNEIKRLQEHYRISGGKQVEPDLSPYDETAYAY
                     SGTLNWFFHPDYQLSFTASHNERLPTPMELYYHGQHIATNSFEYGNKDLKKEQSNNVE
                     LGLGYQAERIGYKVSVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGVEAEASYR
                     FNDQYQATIFGDMVRGWLTNLPPLKINSDYSVFKDYLPENVEKGKDYLLYRADQNTPR
                     TPPMRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEYITEGNTMLNVGLSYSNKWKE
                     LDYKISLNGTNLLNQPVYIHTSYHQFVPQMGRNFMLGMEMKF"
BASE COUNT          791 a          530 c          634 g          716 t
ORIGIN      
        1 taccttatta tccttaattt ttttaaggag aaagattgtg tttaagaaaa caggattggc
       61 attgctgatt tcggctcaat ttagcccgct tgtttgggcg gaaaataacg atgtagcggt
      121 gttagatgaa gtttcggtcg ttggcagcac tccaagtata tcgcagggga gtgaagttac
      181 cttgctaaaa gtcagtgata aaattattgc aggtaaggaa tttaaaaagc gttcggcaac
      241 gctgggtaat gcgttggcgt cagaattagg cgtgcatagt aacccgtttg gtggcggagc
      301 gagtaagccg attattcgtg ggcaggaagg ggcgagaatt cgcattttgc aaaacggttc
      361 agacgtgatt gatatgtcga acctatctcc tgatcacgcc gttgttgctg attcactgct
      421 tgccgatcag gtcgaaatct tgcgtggttc cagcaccttg ctttatgcca gcagttcgcc
      481 ggtaggaatt gtaaatgtgg tggataaacg tattccgacc gctattcctg aaaagggata
      541 tgaggttgaa ctcaatagcc gttttgatac cgccgccaaa gagaaagtcg gcgcattagg
      601 ggcaaccttt ggcatcggta accacattgc ggtgcgagtc gaagggctga gtcgtcatag
      661 tgataactac cgtgtgccgg ggatcaactt aggcgagcgc ttaaactatg tgccggacac
      721 ttacaataaa tccaaagtcg gcacgttggg cttatccttt gtcggtgaac gaggctatat
      781 tggtgcctca tacagcaaac ggcgggataa ttatggcttg ccggggcata accataaatt
      841 tgatttctgt accggtcata tctacggtaa taagcgggat aaatacgctt atacctatct
      901 ctatccgcat ttgattggtg aggaaaatat tgggagcaat ccgcacttcc actgtggaac
      961 caaccacgcc gaggacggca cacacagcca cgataacccg ttcggacacg cccacgatca
     1021 cactcacaaa ggcccgtggg tggatttaga atcaaaacgg attgatgtga aagccgagct
     1081 acgccagccg tttaagggcg tagataaaat taaggcaagc tatgctgatg ccgattatta
     1141 ccacgatgaa aaagatgcag gcgtgcttgc cacccgttac cataaacagc tgaaaaaaga
     1201 tcaggattac ggcaagccgg tgaatatttt caaaaatcgg ggcaaaaata cccgcttgga
     1261 ggtctatcac gcaccgctag gtggcttaac cggtgtatgg ggtgttcagt atcaaacgca
     1321 aaaaagcagt atgaatgcgc cgaaagatcg cgaagtgaaa ttcccgctgg ttgaaaatac
     1381 caataaacag ttcagcctgt ttggggttga gcagtatatg tgggatagcg ttgctgttga
     1441 gcttgccgga cgaatggaaa agcagaagat tgagattgag tatgatcgca atgaaatcaa
     1501 acggttacaa gaacactacc gtatcagtgg cggcaaacag gttgagccag atctttcacc
     1561 ctatgatgaa acggcttatg cctattccgg cacgcttaac tggttcttcc accctgacta
     1621 tcagctttcg tttactgcct cgcacaatga acgcttgcca acgccaatgg agctgtatta
     1681 tcacgggcag catattgcta ctaattcgtt tgaatacggc aataaagact tgaaaaaaga
     1741 gcagtcaaat aatgtggagt tgggcttggg ctatcaagct gaacgtattg gctataaagt
     1801 gagtgtttat tacaatcact ttaaaaacta catctacaat gaaaatcttt tccgtgaaaa
     1861 tcagctattt atgcgccgtt ataatcaggc aaaagcccgt ttttacgggg tagaagcaga
     1921 ggcaagctac cgctttaacg accaatacca agccacgatt ttcggcgata tggtacgagg
     1981 ctggctaaca aatttaccac cattgaagat aaatagcgat tatagtgtgt tcaaagatta
     2041 tctgccggaa aatgtggaaa aagggaaaga ttatcttcta tatcgggctg accaaaacac
     2101 ccctcgtaca ccgccaatgc gtttaggttt tcgctttaat gcggaattta ccccaaattg
     2161 gtcgggggat ttagagctga tccgcacctt tacccaacgc cgtacgagcc agttggaata
     2221 tattaccgaa ggtaatacga tgttgaatgt cgggttgtcg tatagcaata agtggaaaga
     2281 gctggattac aaaatcagtc taaacggcac aaacttactg aatcagccgg tgtatatcca
     2341 cacttcgtat caccaatttg taccacaaat gggacgaaat tttatgttgg gaatggagat
     2401 gaaattttaa gttctcgaca taacaagaca agcggttatt ttttcttcaa attttgcaaa
     2461 aaaacggcta aaaataaccg cttgtttaaa actcaggtat tggtaatttg gataaaatag
     2521 tgctgttttt cctttcttgt tattttcgga gcttaccaaa atttcctgtt tgttgttaaa
     2581 taagacaatt aactttatcc ctttattaaa aatatggtta tttataaata acttagcatc
     2641 tgtcaagaga aaaagtaaaa atttattggt t
//
LOCUS       DANLXO010000175         2590 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.179, whole genome shotgun sequence.
ACCESSION   DANLXO010000175 DANLXO010000000
VERSION     DANLXO010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.179"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            322..576
                     /locus_tag="PXD69_002597"
     CDS             322..576
                     /locus_tag="PXD69_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284732.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFCNYQQFMPEVEAKESLR
                     KQEPELDDRYNEEEYSEEEYPDENDASDENDNYDETYNVF"
     gene            776..952
                     /locus_tag="PXD69_002598"
     CDS             776..952
                     /locus_tag="PXD69_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284733.1"
                     /translation="MATSSFDKRFVVKDPKAVKVLIEALQSPIKVVLPKKDLEKEEKE
                     ALCAIKKRLASMGL"
     gene            913..1464
                     /locus_tag="PXD69_002599"
     CDS             913..1464
                     /locus_tag="PXD69_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284734.1"
                     /translation="MCNQKTLSLYGLVKELGIEKTQLFLEQAFSCSRNKDVESFLLNK
                     AIRFETALAAATHLIINEQGDILAYFTLSFKEIEVEVSKSQLKKLTAGLSNDSHLRVL
                     LIGQIGKNEKVIDNPAKLPDILNHIYAQLYKAQRVLGGRVVILECENTPKLLELYKQN
                     KFQILNTIGSENGLKTLFFIPDF"
     gene            1534..1764
                     /locus_tag="PXD69_002600"
     CDS             1534..1764
                     /locus_tag="PXD69_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284735.1"
                     /translation="MSLLKKAQTFISIFNDVRTKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCGIHAVETYDNV"
     gene            1863..>2590
                     /locus_tag="PXD69_002601"
     CDS             1863..>2590
                     /locus_tag="PXD69_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011150324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6284736.1"
                     /translation="MFYSNNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTSYRYQQ
                     AVEQSGVDALLNQNRRVPNLKNRVDEATEQAVVKFAFDNPAFGQVRVSNELRKQGIFI
                     SAGGVRSIWLRHNLANFKQRLNALEKAVAEKGIILSENQVQALERKKEDDVACGEIET
                     AHPGYLGSQDTFYVGNLKGVGRIYQQTFIDTYSKVAFAKLYTMKTAISAADMLNDKVL
                     PFFESQGLPMLRILTDRGSEYCGKV"
BASE COUNT          900 a          457 c          492 g          741 t
ORIGIN      
        1 ccgctactca acatacaggg atggttatct tgataacgct cacgatactc ttgagcaata
       61 gctagtaatt gctgattagt catataaagt ctccaataac ataataaacc tgaaaacgtt
      121 cttagtattc tggcaacatt tttataaata gaaaccaaaa actatattca aatcattttt
      181 agtttctgct caacattcct atgtttttcc atacactgaa gtaaatttac ctaaccctat
      241 tttgctgtga aaccaaaact cctcacgctt atccttagta gcatttcgat gtcgctcact
      301 tatgccaccc ctcaattagg gatgatatgc cacgctgatc ctgaatatgt aaaatacaac
      361 tacgccggac tttgggaaaa aggcagcgat ggcacttttt tctgcaatta ccagcaattt
      421 atgcctgaag ttgaagctaa agaatcacta aggaaacaag aaccagaact tgatgataga
      481 tataacgaag aggaatatag cgaagaagaa tatcctgatg aaaatgatgc cagcgatgaa
      541 aacgataact acgatgaaac ttataatgtt ttctagtatg tatatggaaa ccggaggaat
      601 ccgtgattga aaaggcttgc atttccaaat atagtctata tattgtggta attgaaagta
      661 tttctatgct aacaagcata aggctatgta atcgaaaacc acccacaagg cctaaataca
      721 gtattattac agccatgagt aaccatggta atttaaatat ttaaggagtt ctataatggc
      781 aacatcatca tttgataaac gctttgtagt caaagatcca aaagctgtca aggtattaat
      841 tgaggcatta caaagcccaa tcaaagtagt tttacctaaa aaagacttag aaaaagaaga
      901 gaaagaagca ctatgtgcaa tcaaaaaacg cttagcctct atgggcttgt aaaagaacta
      961 ggtattgaaa aaacacaact ctttttggag caagcatttt cttgcagtag aaataaagat
     1021 gttgaaagtt ttctacttaa taaagcaatc agatttgaaa ccgcattagc agcagcaaca
     1081 catttaatca ttaatgaaca gggcgatatt ttggcttact ttaccctctc ttttaaagaa
     1141 attgaggtgg aagtaagcaa aagccaatta aaaaagctaa ctgctggttt aagtaatgat
     1201 tcacatttaa gagtattgct tatcggtcaa atcggcaaaa atgaaaaagt aattgacaat
     1261 ccagccaaat tgccagatat tctaaatcat atctatgcac aactttataa agcacaacga
     1321 gttttaggtg ggcgagtcgt tatattagaa tgtgaaaata cgcctaaatt attagaacta
     1381 tataaacaaa ataaatttca aattctcaat accattggaa gtgagaatgg tctaaaaaca
     1441 cttttcttta ttcctgattt ttaactacag ctaatatttc attagaagaa agtcgccagc
     1501 tttgtcagga agtcatatat gggagaaaga acaatgtctc tacttaaaaa agcacaaacg
     1561 tttatttcta tttttaatga cgtgcgaact aaaaatgaag ctcaacgcca gtcttcaaac
     1621 aatttaaatg ttgccttgaa aaatgctgct gaaatgagag ctgagatgaa tgggttctcc
     1681 cttaagcctc aaaagcgttc tacttacttt gctgaccatt atggttgtgg tattcatgca
     1741 gtagaaacct atgataatgt gtagaagatc agacttgatc tgacaattca ctctaaaaag
     1801 tgagagtttc ccgtttagaa tatgagtgtc caaattcaat ctaaacaaaa aaggaaactc
     1861 tcatgtttta ttctaacaac cctctcatta aacacaagac cggtttatta aatttagcag
     1921 aagaactggg caatatctct caagcctgta aggtgatggg gatgagtcga gatacatcct
     1981 atcgctatca acaagcagtt gagcaaagtg gggtggatgc cttacttaat caaaatcggc
     2041 gtgttcctaa tctaaaaaat cgtgtggatg aggcaacaga gcaagctgtt gtgaagtttg
     2101 cattcgataa tccggcattt gggcaggtac gagtcagtaa cgaactccgt aaacaaggta
     2161 tttttatttc agcaggtggt gtgcgttcta tttggctacg ccataatctc gctaacttta
     2221 aacagcgttt aaatgcgtta gaaaaagcag tggctgagaa aggcattatt ctgagtgaaa
     2281 accaagttca agccttggag cgtaaaaaag aagacgatgt ggcttgtggc gaaattgaaa
     2341 cggctcatcc gggctatcta ggttcacaag ataccttcta tgtggggaat cttaaggggg
     2401 ttggacgcat ttatcaacag acctttattg atacttatag taaagtcgca tttgcaaaac
     2461 tgtatacgat gaagacagca attagtgcag cagatatgct caatgataaa gtcctaccgt
     2521 tctttgagtc ccaaggatta ccgatgttgc gtattcttac cgaccgaggc agtgagtact
     2581 gtggcaaggt
//
LOCUS       DANLXO010000176         2571 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.180, whole genome shotgun sequence.
ACCESSION   DANLXO010000176 DANLXO010000000
VERSION     DANLXO010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.180"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..395)
                     /locus_tag="PXD69_002602"
     CDS             complement(<1..395)
                     /locus_tag="PXD69_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL6284737.1"
                     /translation="MRSMFKKFFGKNKSQSAVKSDTIFSIEQDNEGWLYPEKASQLLN
                     TELRQKYLGLLWQQVSMNRQMFEVLYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKVRQSYILPPNVAPEEQSKQR"
     gene            complement(499..963)
                     /locus_tag="PXD69_002603"
     CDS             complement(499..963)
                     /locus_tag="PXD69_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArdC family protein"
                     /protein_id="HDL6284738.1"
                     /translation="MMNTQQPKFDLYQHITDRIIAALEQGTAPWLKPWSHPECNMALP
                     RNAVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRP
                     NEREKLDEEGNIVYDEEGNPEMEQHFFIAKHNLFNLDQCENLPAELYDPVIP"
     gene            1172..1435
                     /locus_tag="PXD69_002604"
     CDS             1172..1435
                     /locus_tag="PXD69_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme-like superfamily protein"
                     /protein_id="HDL6284739.1"
                     /translation="MRPVTRNNRGTSFDPRHNKYINTLATALLARWHIEQFSERNIPV
                     NDENLYMAHNIGLDGFHRALLGQSTRKDIENMRKNGMKPWMSI"
     gene            complement(1519..2544)
                     /locus_tag="PXD69_002605"
     CDS             complement(1519..2544)
                     /locus_tag="PXD69_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL6284740.1"
                     /translation="MTAGDTPHDTLKTLVGALKDTREEARKANERGDRFEQEVLRLQA
                     REAEVDSRIAGEVESRVESRLAAAWDGFNRQIEELKGRVQSGNQQQKEAEAIPVGGAS
                     SGFGTESAGQTGNVDNNGIRWVDPDDMVVTDEQGKPVTGNYSGKTKTGFPSPFKAEGE
                     SSNTGTALNNNAGTENMTGNTQIQQIKRTPYYTIPENSTLMGSTAMTALLGRVPIQGA
                     VTDPFPFKVLIGRENLIANGIDLPDVEGAIVSGTSTGDWTLSCVRSEVTSITFVFADG
                     RISNGRASGESRAVKRNQASNLTPFCLTVSLSGFNDIPHSDGNPGFLTMSAVDYVDVY
                     LMSHLAR"
BASE COUNT          706 a          580 c          494 g          791 t
ORIGIN      
        1 tctcgttgct ttgattgttc ttcgggagct acattcgggg gcaaaatata gctttgacga
       61 actttagctg aaaaagcaat aacttctaaa ccgtgatcaa gcattccacc gatatgtgaa
      121 tgatggtgtg attcagaagc tggtaatagt tgaaccatct cagcgtaacg ttctattggc
      181 tgctgataaa gtacctcaaa catttgacgg ttcattgata cctgttgcca aagtagccca
      241 agatattttt gtcgtaattc tgtattaagt aattgagagg ctttttccgg gtataaccac
      301 ccttcattat cttgctcaat agaaaaaata gtatcggatt tgaccgcact ttgagattta
      361 tttttaccaa aaaatttttt gaacattgaa cgcattggaa gagaccgaaa atatgaatgc
      421 tgtattgaat gaaagccgtt tagccctttg cccttttggg taagaccttt ccccttggaa
      481 aggttactct tatccccctt aggggattac aggatcgtac agttccgccg gtaaattttc
      541 acactggtct aaattgaaca gattgtgctt agcaatgaaa aagtgttgtt ccatttccgg
      601 atttccttcc tcgtcataca caatatttcc ctcctcatcg agtttttctc tctcattagg
      661 acggtagttc atcacaacag tagctttttc ccctttacgg atatatccgc cgagttcatt
      721 ggcttttttc gccgtaatcc acttacactg tttgtagccg tgttcagcgg tagcaatcca
      781 aagcaataac gtattgatac cggaatacag acggttagaa accgcattgc gaggtaatgc
      841 catattgcat tccggatggc tccacggttt taaccacgga gctgtacctt gttccaatgc
      901 agcaatgatt ctatcagtaa tatgttggta taaatcaaat ttaggttgtt gagtgttcat
      961 catgtgtttc tccaaagttt gggtaaaaaa atggggaaac acggttaccc tatggggaac
     1021 ttgtttcccc gatgggtagt ttataaaatt tcaatggcca caatttttct agaatcatca
     1081 aagccaacag aactgcctat ggcgtagtaa ttacgaatag tctgttcatc ggcattgatt
     1141 agcagatacc tatcgaggaa gagagattgg gatgagaccg gtaacgagaa ataatcgtgg
     1201 aaccagtttt gaccctcgtc acaataaata catcaataca ttggcaaccg cattattggc
     1261 acgttggcat attgagcaat tctctgagcg taatatccca gtcaatgatg aaaatctcta
     1321 tatggctcac aatattggct tagatggttt ccatcgagcg ttattagggc aatctactcg
     1381 taaagacatt gagaatatgc gtaagaatgg gatgaaacct tggatgtcca tttagctctg
     1441 ttttcaaatg acctaatcca gtttgttccg gagagagtac cgaaattttg cactctttca
     1501 tccgtggtgt atcaaacttc aacgtgctaa atgagacatt aaatatacat caacataatc
     1561 taccgcactc atcgttaaga aaccgggatt cccatcagaa tgaggaatat cgttaaagcc
     1621 cgataaggag acggttaaac aaaatggtgt taaattactt gcttgatttc gtttcacagc
     1681 tctgctttct ccactcgctc gcccattcga aatacgaccg tctgcaaaca caaaggtaat
     1741 gctcgttacc tcagaacgaa cgcaagatag cgtccaatct ccggttgatg taccggatac
     1801 aatcgccccc tcaacatcag gtaaatcaat gccattggca attaaatttt ctcgcccgat
     1861 taatacttta aacggaaacg gatctgtcac agcaccttga ataggtacac ggcctaacaa
     1921 tgccgtcatc gcagtagaac ccattaaagt cgaattttcg ggaatagtgt aataaggtgt
     1981 acgctttatt tgctgtatct gagtattacc agtcatattt tctgtcccag cattattatt
     2041 taatgctgtc ccagtatttg aactttcccc ctctgcttta aaagggcttg gaaagccggt
     2101 ttttgttttc ccggaataat tgcctgtaac cggtttacct tgttcatcgg ttaccaccat
     2161 atcatcagga tcgacccagc gaatgccatt gttatctaca ttccctgttt gtcctgctga
     2221 ttcagtccca aagccagaag aagcccctcc tacagggatt gcctctgctt ctttctgctg
     2281 ctgattacca ctttgaaccc gacctttcag ttcttcgatt tggcgattaa atccatccca
     2341 agcagcagcc aaacggcttt ctacacgact ttctacttca cccgcaatac gagaatccac
     2401 ttcggcttct cttgcttgta agcgtaatac ctcttgctca aagcgatcac cacgctcatt
     2461 tgctttacga gcttcttcac gagtatcttt taatgctcct accaacgttt ttaatgtatc
     2521 gtgaggcgta tctcctgcag taatacctaa tgtattcgcc tcctcatcac t
//
LOCUS       DANLXO010000177         2557 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.181, whole genome shotgun sequence.
ACCESSION   DANLXO010000177 DANLXO010000000
VERSION     DANLXO010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.181"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..1664
                     /locus_tag="PXD69_002606"
     CDS             <1..1664
                     /locus_tag="PXD69_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDL6284741.1"
                     /translation="QHSTAQRDLNADTSQAFLNELDQTLWTAADKLRKNLDAANYKHI
                     VLGFIFLKYISDSFTDFQAKLKTQLTTPESELYLDPALFDEQEFSQILAEELEQRDYY
                     AAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKG
                     VLQRIAGFGVPDEMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFAL
                     AEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAI
                     SVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQK
                     EWWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEG
                     DIRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINKAKARKGEVLFINATQIGYLKD
                     RVLRDFTADDIAKISDTYHNWQKQNGYENIPAFCYCATLDEIAKNDFVLTAGRYVGAV
                     QEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI"
     gene            1654..>2557
                     /locus_tag="PXD69_002607"
     CDS             1654..>2557
                     /locus_tag="PXD69_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6284742.1"
                     /translation="MAFNQYVFSDIVELISEKIKIKDLKKENYISTDNMLPNFGGITL
                     AENLPNSASCNRFAKKDILFSNIRTYFKKVWLAEFSGGCSPDVLVMRSKNTDILLNEY
                     LFLLIRSDDFINFTVISANGAKMPRGDKNAMKGFIFNIPSIEYQKKCIANYFAFDQKI
                     QLNTQTNQTLEAIAQAIFKSWFVDFDPVRAKAAALSEGKSEHEANLAAMSVICGKDTS
                     ELNDTEYKALWQIAEAFPSEFGDEGLPIGWKFNQADNLFDVGIGKTPPRKESEWFSDN
                     ANDTEWISIKDMGNQGLFITESSEY"
BASE COUNT          807 a          601 c          528 g          621 t
ORIGIN      
        1 cacagcacag cacagcacag cgtgatctca acgctgacac aagtcaagcc tttttaaacg
       61 aactcgacca aaccctctgg actgccgccg acaaactgcg taaaaacctc gatgccgcca
      121 actacaaaca catcgttctt ggctttatct tcctaaaata catctccgac agctttaccg
      181 atttccaagc caagctaaaa acccagctta ccacccccga aagcgaactc tatcttgacc
      241 ctgcactatt tgacgaacaa gaatttagcc aaattcttgc cgaagagttg gaacagagag
      301 attactacgc cgctgaaaac atcttttggg tgccggagca agcccgctgg gacaacatca
      361 aatcattaag caaactcaat cttggcgatg aattgccttg gggagacaaa tttaaaggtg
      421 tcagccgctt gattgatgat gcctttgaag ccatcgaacg ggaaaacccc aaactcaaag
      481 gcgtactcca acgcattgcc ggctttggcg tgcctgatga aatgctcaca ggcttaattg
      541 acctgttctc acgcaccaat ttcacccagc ctatgcacaa tggcgaacct gtgcatctgc
      601 aagccaaaga cattttaggg cacgtctatg aatactttct tgggcaattt gcccttgccg
      661 aaggcaaaaa aggcggtcaa tacttcacgc caaaatccat cgttaccctg attgttgaaa
      721 tgctcgaacc ctattcaggg cggatttacg acccagctat gggcagcggc ggcttttttg
      781 tgcaagctga ccgctttatt caggctcacg caggcaaccg caacgccatt tccgtttatg
      841 ggcaagaatc caactccacc actcgcaaac tggcggtgat gaatatggcg attcgtggta
      901 ttccctttga ctttggcgac aagcccgaag ataccctact aaaccctttg cacatcgaca
      961 aaaaaatgga tgttgtgatg gcaaatccgc cctttaacca aaaagagtgg tggaatgaaa
     1021 gcctagcaaa cgatccacgc tgggcatacg gcacaccgcc gcaaggcaac gccaactttg
     1081 cgtggttgca acatatgatt taccacctct cccccaaagg caaaatggca ctcctgctcg
     1141 ccaacggctc aatgagcagc caaacttcag gcgaaggcga cattcgcaaa aacatcgtgc
     1201 aagctgacct tgtcgaagcg atgattgccc tgcccaatca gctattcacc aacacccaaa
     1261 tccctgcctg catttggatt atcaataaag ccaaagccag aaaaggtgaa gtgctgttta
     1321 tcaacgccac ccaaataggc tacctgaagg accgcgtctt gcgtgatttt accgctgatg
     1381 acatcgccaa aatcagcgac acctaccaca actggcaaaa acagaacggc tacgaaaata
     1441 tccctgcgtt ttgttattgt gccacgctgg acgaaatcgc caaaaacgat tttgtgctga
     1501 ccgcagggcg atatgtcggt gcggtacaag aagaaaatga cggcgtgccg tttgcagaaa
     1561 aaatgcagga attgaccgct ttattgaatg aacaatttaa acaagggcgg gaattggaac
     1621 agcaaatcgc agagaattta aaggggttgg gatatggcat ttaatcagta tgtattttca
     1681 gatattgttg aattaatatc cgaaaaaata aaaatcaaag acttaaaaaa agaaaactat
     1741 atttcgacag ataatatgct gcctaatttt ggtggaataa cacttgctga aaaccttcca
     1801 aattcagctt cttgcaatag gtttgccaaa aaagacattt tgttttccaa tataagaacc
     1861 tactttaaaa aagtttggct tgctgaattt tcaggtggtt gttctcctga tgttctggta
     1921 atgcgcagta aaaacacaga tattttatta aatgagtatt tatttttact tatccgttct
     1981 gatgatttta ttaactttac agttatatca gcaaatggag caaaaatgcc acgaggggat
     2041 aaaaatgcaa tgaaaggttt tattttcaat atcccaagta ttgaatatca aaaaaaatgt
     2101 attgctaatt attttgcctt tgaccaaaaa atccaactca acacccaaac caaccaaacc
     2161 ctagaagcca ttgcacaggc aatcttcaaa agctggtttg tggattttga ccctgtgcgc
     2221 gccaaagccg ccgccctaag cgaaggcaaa agcgaacacg aagccaacct tgcggcaatg
     2281 tcggtgattt gtggtaaaga caccagcgag ttaaacgaca ccgaatacaa agcgctttgg
     2341 caaatcgccg aagccttccc aagtgagttt ggagatgaag ggttacctat tggctggaaa
     2401 ttcaatcaag cagacaattt atttgatgtt ggtattggga aaaccccacc aagaaaagag
     2461 agtgaatggt tttctgataa tgcaaatgat acagaatgga tttctattaa agatatggga
     2521 aatcagggat tatttatcac agaaagtagc gaatatc
//
LOCUS       DANLXO010000178         2554 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.182, whole genome shotgun sequence.
ACCESSION   DANLXO010000178 DANLXO010000000
VERSION     DANLXO010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2554
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.182"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            43..474
                     /locus_tag="PXD69_002608"
     CDS             43..474
                     /locus_tag="PXD69_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL6284743.1"
                     /translation="MFLSGFLSATLLPGNSEIIFTTLASQHLITYGSLSSFSLFNLLL
                     VATLGNSLGSITTYAIGLLLPRPQNTTNRYSQWALAKSEKYGVLVLLFSWLPIVGDIF
                     CGIAGWLRFSLWQSILFIVIGKLLRYLFLLATLYSVLPHIL"
     gene            complement(528..1397)
                     /gene="htpX"
                     /locus_tag="PXD69_002609"
     CDS             complement(528..1397)
                     /gene="htpX"
                     /locus_tag="PXD69_002609"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HDL6284744.1"
                     /translation="MAKRVILFLLTNLAITFVLGIVLNLIFKVTGIQGQSTAGILVLS
                     LVFGFSGSLISLFMSKSMALRSVGAEVITQPRNEAEQWLFNTVQRQAQQANIPMPDIA
                     IYHSADVNAFATGATKSNSLVAVSTGLLNSMTKDEAEAVVAHEVAHIANGDMVTMTLL
                     QGVLNTFVIFLARIISTMAASSRDENGNSSTNTLVFWVVDIVLQMVFGVLATMIAMWF
                     SRQREFRADAGSAQLVGKEKMIAALQRLQRVHEPQEMEGSLAAFMINGSRGKELFMSH
                     PPLEKRIEALRNL"
     gene            complement(1485..2522)
                     /gene="dinB"
                     /locus_tag="PXD69_002610"
     CDS             complement(1485..2522)
                     /gene="dinB"
                     /locus_tag="PXD69_002610"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDL6284745.1"
                     /translation="MDCFYAAVEMRENPALVGKPVAVGGNANQRGVLTTCNYEARKFG
                     LHSAMPTATALKKCPNLILLPVNMALYKSVSAQIHEIFHRYTDVIEALSLDEAYLDVT
                     ECERYFGSATWIAQAIRNDIFNELHLTASAGVAPLKFLAKITSDQNKPNGQCVITPDD
                     VQNFVKNLPLAKIPGVGKVTNEKLKQLGFETCGDIQQAEKAVIYRAFGKFGQRLWDFS
                     HGIDERAVEPYRERKSLAVENTLLHDISTLEQAEKIVADLFDKLVFRLQRNWGDTPLT
                     EFKKLGIKLKFDDFSQTTLERTTDGFAYERFGELLQQIFTRRKERKVRLIGLSVHFPE
                     KKVNKQLNLWE"
BASE COUNT          715 a          589 c          467 g          783 t
ORIGIN      
        1 tttttcagtt tattcttttc cgaacaaaat caactcttta ctatgtttct gagtggattt
       61 ctaagcgcta ccctcttacc cggaaattct gaaattatct tcactacctt agcaagccaa
      121 catctcatca cttatggctc tttatcctca ttttcactgt tcaatttact cttggttgca
      181 accttaggta atagtttagg tagcataacc acttatgcga tagggctatt actccctcgc
      241 ccacagaata ctaccaatcg ttattcacaa tgggcattag ccaaaagtga aaaatatggc
      301 gtgttagtct tgctttttag ttggttaccg attgtaggcg atattttctg tggcattgcc
      361 ggctggctac ggtttagcct ttggcaaagc attctcttta ttgtgattgg gaaattgtta
      421 cgttatctgt ttttgctggc aactctctat tcggtgttac cgcatatttt atagaaaaca
      481 aaagcggctg ttttgcaaaa aattttacaa aaacaaccgc ttgtgcttta taagtttctt
      541 aacgcttcaa tacgtttttc taacggaggg tggctcataa acaactcttt accacggcta
      601 ccgttaatca taaaggcagc aagagagcct tccatttctt gcggttcgtg aacacgttgc
      661 aagcgttgta atgccgcaat cattttctct ttaccgacta attgagcaga gcctgcatct
      721 gcacgaaatt cacgttggcg agagaaccac attgcaatca ttgttgctaa cacaccaaac
      781 accatctgta acacaatatc tactacccag aacaccagcg tattggtgct tgaattgcca
      841 ttttcgtcac gtgaacttgc cgccattgtc gaaataatac gagctaagaa aatgacgaaa
      901 gtatttaaca cgccttgtaa taaagtcatt gtaaccatat cgccattcgc aatgtgcgcc
      961 acttcgtgtg ctactaccgc ttcagcttcg tctttagtca ttgaattcag caagccggtg
     1021 ctgactgcaa ctaaagaatt acttttcgtt gctcctgtag cgaatgcatt tacatcagcc
     1081 gaatggtaaa tcgcaatgtc cggcattggg atattcgctt gctgagcctg acgttgtaca
     1141 gtgttgaata accattgctc cgcttcgtta cgaggctgtg taatcacctc tgccccaacc
     1201 gaacgcaatg ccattgattt cgacataaat agcgaaatta aagacccact gaaaccgaag
     1261 actaacgaaa gcaccaaaat accggcagtg ctttgccctt gaatgccggt cactttaaaa
     1321 ataaggttta atacgatccc taaaacaaag gtaatcgcta agttagttaa taaaaataga
     1381 atgacacgtt ttgccataat gttttcaatc tccaaaaata tagatgcaat gattgcacga
     1441 ataagataat gactttagcc ttaatttcaa gtcattattt acaattattc ccacaaattt
     1501 aactgtttat tcactttttt ctcgggaaag tgaacactta gaccgattaa tcgcaccttt
     1561 cgttcctttc ttcgggtaaa aatttgctgt agcaactcgc caaatcgctc atacgcaaag
     1621 ccatcggtgg ttcgttcaag cgtggtttgg ctaaaatcat caaacttgag tttaatgcct
     1681 aactttttaa actcagttaa tggcgtatcg ccccagtttc gttgcaaccg aaaaaccagt
     1741 ttgtcgaata aatctgccac aatcttttcc gcttgctcaa gggttgaaat atcgtgcaac
     1801 agcgtatttt ccaccgccag cgattttctt tcacgataag gctctaccgc tcgttcatca
     1861 ataccgtggc taaaatccca aagccgttgc ccgaatttgc caaacgctcg gtaaataacc
     1921 gctttttctg cttgctgaat atcaccacag gtttcaaagc caagctgttt taatttttca
     1981 ttggttactt tccccacacc cggaattttt gcaagcggta gatttttcac aaaattttgc
     2041 acatcatcag gcgtaatcac acattgtccg ttaggtttgt tttgatcgga ggtaattttt
     2101 gctaaaaatt taagcggagc aactcctgcc gaggcagtta aatgcaattc attgaaaata
     2161 tcattgcgga ttgcttgagc aatccaagtg gcggagccaa aatagcgttc gcattcggtt
     2221 acatctaaat aggcttcatc aagcgacaag gcttcaatca catccgtata gcgatgaaaa
     2281 atttcgtgaa tttgagcgga aaccgattta tacaacgcca tattcaccgg caataaaatt
     2341 aaattcgggc atttcttcaa cgcagttgcc gttggcattg cactgtgtaa gccgaatttt
     2401 cgagcctcgt aattacaggt tgtcagcaca cctcgttgat tagcattgcc gcccaccgcc
     2461 accggcttac cgaccaacgc cgggttttcc cgcatttcga ccgctgcata aaaacaatcc
     2521 atatcaatat ggataatttt tcgcttatgt ttag
//
LOCUS       DANLXO010000179         2549 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.183, whole genome shotgun sequence.
ACCESSION   DANLXO010000179 DANLXO010000000
VERSION     DANLXO010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.183"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            89..2476
                     /locus_tag="PXD69_002611"
     CDS             89..2476
                     /locus_tag="PXD69_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HDL6284746.1"
                     /translation="MEKMMRKINQLIISPYFFLSILSASANSDFWKSDLNFNLTNITK
                     RVGVDNFTTPVAGEPWAGIGPNGEAAGTAPLYYSRIPAMQVTEDNKLVVMFDLRWNRA
                     YDQDRIDPGIAISSDGGHTWTKKTAWSFDRTNHPARRSMDPTLLHNPIDNSLYVMHGT
                     WSMSDQQWYGGRVPHFNSGSWAATIYKSTDGGLNWEKNTEFSKFSNLDVFSKVTKNGK
                     PTLGFLGGVGSGIVMQDGTLVFPIQTAHQNGIATTIMYSKDNGKTWEMPEIDNPVAPN
                     QSSLENMVFELEPGKLVMTGRGNSRWAYSSTDMGKTWELFTPTNGLLPTSSQPTQGSS
                     IYVTLPNGRKVLLISKPDGKNDGWKRGDITLWMLDAKDPSHKHKVHIIRPGSGNAAGA
                     GYSSLAYKEGNLFVAFENDGDISVKNLTEHIAEMEAKAIEWGLPDELTPALDKINALP
                     YLNKAQKETLVEKMRRANDTAIAQSFVINKEMYNLKNNSDELDKLAKNITKALPSQQN
                     IYQRALAYVNKVTNTADTTYLNYNGIMDTYANLYESYLALNTKLDFTRYIQKARKFNE
                     YNTDILYRSFDNFFAHYDTGVKHNNLSLGLNTKLSENLRGGLFFEYSNKNRNSVQIGA
                     RAKYEMDNHQLSGFLRYRGVKHKDMLARNNSVDGYLNYAYRIQLDDKLSISPSVGAYV
                     SRSSRSLIDEDLAINSRTVYASDVGLNIHYKLNDIDAYIRPSIGFVNGDITLSQSNDM
                     TNTYKIKDKSNVYSVTTGLKKRFANGVALGADFKLHRYGSQTTESNFGLNVSYNW"
BASE COUNT          834 a          448 c          491 g          776 t
ORIGIN      
        1 attacttgct atctggtatt ttatacataa gattgaacca tataatagct gttcagctaa
       61 aaattagtct ttgcacttta tccccctaat ggagaaaatg atgagaaaaa tcaatcagtt
      121 aatcatatcc ccatactttt tcctaagtat tttatctgct tccgctaact ctgatttttg
      181 gaaaagcgac cttaatttta atctcacaaa tattaccaag cgtgtcggag tcgataactt
      241 taccactcca gtagctggcg agccttgggc tggtattggt ccaaatggtg aagctgcagg
      301 tactgcgcca ttatattata gccgtattcc agctatgcaa gttaccgaag ataacaaatt
      361 agttgttatg tttgatttac gctggaatcg tgcgtatgac caagatcgta ttgatcctgg
      421 tattgcgatt tcttccgatg gtggccatac ttggacgaag aaaaccgctt ggtcttttga
      481 tagaactaat cacccagcac gccgttcaat ggatccaacg ctattacata atcctattga
      541 taatagttta tatgtaatgc acggaacttg gtctatgtcg gatcaacaat ggtatggtgg
      601 gcgtgttcct cactttaata gtggcagctg ggcagctacc atttataaat ctactgatgg
      661 tggtttaaat tgggagaaaa atactgagtt tagtaaattc agcaatttag acgtattttc
      721 taaagtcacc aaaaatggaa aacctacctt aggcttttta ggcggggtcg gatctggaat
      781 tgtaatgcaa gatggtacgt tggttttccc aattcaaacc gcacatcaaa atggtattgc
      841 gaccactatt atgtattcta aggataatgg gaaaacttgg gaaatgccag aaattgacaa
      901 cccagttgca ccgaaccaaa gttctttaga aaatatggtg tttgaactcg aaccgggtaa
      961 gctagtgatg actggacgag gaaacagtcg ctgggcatac tcttctactg atatgggtaa
     1021 gacctgggaa ttatttactc caactaatgg attattacca actagctcac aaccaactca
     1081 aggctcttct atctatgtaa cactaccaaa tggtcgaaaa gtgctactaa tctctaaacc
     1141 agatggaaag aatgatgggt ggaaaagggg tgatattaca ctttggatgc tagatgcaaa
     1201 agatccatcg cacaaacaca aggtgcatat tattcgtcca ggttcaggta atgccgctgg
     1261 tgctggttat tcctctttag cctataaaga agggaattta tttgttgctt ttgaaaacga
     1321 tggtgatatt tcagtaaaaa atttaactga acatattgct gaaatggaag caaaagctat
     1381 cgaatgggga ttaccagatg aacttactcc tgctttggat aaaatcaatg cactgcctta
     1441 tctcaataaa gctcaaaaag agacgctagt cgaaaaaatg cgtcgtgcta atgatactgc
     1501 gattgcacaa tcttttgtga ttaacaaaga aatgtataat ctgaaaaaca atagtgatga
     1561 gctggataaa ttggcaaaaa atattactaa agcactgccg tctcaacaga atatttatca
     1621 aagagcctta gcctatgtga ataaagtcac caatacagcg gataccactt atttaaatta
     1681 taatggtatt atggatacct atgctaattt atatgaaagc tatttggctt taaatactaa
     1741 attagacttc actcgctaca tccaaaaagc gagaaagttc aatgaatata acactgatat
     1801 tttatatcgt agctttgata atttctttgc ccattacgac acaggtgtaa aacacaataa
     1861 tctatcctta ggcttgaata caaaattaag tgagaattta cgtggtggct tattctttga
     1921 atacagtaat aaaaatcgta atagcgtaca aattggtgca agagctaaat atgaaatgga
     1981 taatcaccaa ctttctggct tcttacgcta tcgtggcgta aaacataaag atatgctagc
     2041 acgtaataac agtgttgatg gctacctaaa ttatgcttat cgtattcaat tagatgataa
     2101 attaagcatt agcccatcag ttggtgctta cgtttcacgt tcttctcgct cattaataga
     2161 tgaagatctt gcgattaata gccgcacggt ctatgcaagt gatgtaggat tgaatatcca
     2221 ttataagcta aatgatattg atgcttatat tcgtccaagt ataggctttg tcaatggtga
     2281 tataacttta tctcaatcta atgatatgac aaacacatac aaaataaagg ataaaagtaa
     2341 cgtgtattct gtcacgacag ggttgaaaaa acgctttgca aatggtgtgg cattaggggc
     2401 tgatttcaaa ttacatcgtt atggttctca aactactgaa agtaatttcg gtctaaatgt
     2461 aagttataac tggtaatacc gtaaactgat tacgatttaa aagttagact agcccaagac
     2521 tgagttctat attccataga gctcagtct
//
LOCUS       DANLXO010000180         2506 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.184, whole genome shotgun sequence.
ACCESSION   DANLXO010000180 DANLXO010000000
VERSION     DANLXO010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.184"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(116..191)
                     /locus_tag="PXD69_002612"
     tRNA            complement(116..191)
                     /locus_tag="PXD69_002612"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(156..158),aa:Thr,seq:ggt)
     gene            complement(195..269)
                     /locus_tag="PXD69_002613"
     tRNA            complement(195..269)
                     /locus_tag="PXD69_002613"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(234..236),aa:Gly,seq:tcc)
     gene            complement(313..397)
                     /locus_tag="PXD69_002614"
     tRNA            complement(313..397)
                     /locus_tag="PXD69_002614"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(361..363),aa:Tyr,seq:gta)
     gene            complement(432..507)
                     /locus_tag="PXD69_002615"
     tRNA            complement(432..507)
                     /locus_tag="PXD69_002615"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(472..474),aa:Thr,seq:tgt)
     gene            754..1704
                     /gene="coaA"
                     /locus_tag="PXD69_002616"
     CDS             754..1704
                     /gene="coaA"
                     /locus_tag="PXD69_002616"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HDL6284747.1"
                     /translation="MSLEKTSKITPFLTFDRQQWADLRKSVPLKLTEQDLKPLLGFNE
                     DLSLEEVRTIYLPLARLIQYYIEENLKRQTVLHRFLGIEPPKVPYIISIAGSVSVGKS
                     TSARILQALLSHYPKERKVDLITTDGFLYPLATLTEKNLLKKKGFPESYDIHSLIRFV
                     SDIKSGKRNVKAPIYSHLTYDIIPNQFNTVDQPDIVILEGLNVLQSGMNYPSSPHNVF
                     VSDFVDFSIYVDAEESLLKKWYINRFLKFRRSAFADPNSYFHHYASLSEQEAIETAST
                     IWEEINGLNLRQNILPSRERANLILIKGQDHAIETVKLRK"
     gene            1857..2396
                     /locus_tag="PXD69_002617"
     CDS             1857..2396
                     /locus_tag="PXD69_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HDL6284748.1"
                     /translation="MNKKFLLPLILFLALSVAFLVQLARNSQGDDPKKLESALIGKTV
                     PSFNLESVLDEKQTIDQNIVKTGKPRLLNVWATWCPTCYAEHEYLTILAKQGVEIVGI
                     DYKDERPKAIKFLANYGNPYKAIIFDPKGSLGLDLGVYGAPETFIIDGNGVIQYRHAG
                     DVNDQVWNQVLKPIYDGLK"
BASE COUNT          790 a          515 c          473 g          728 t
ORIGIN      
        1 tttctaaaag cctcttaaac aaaaacggtt acaatggaac aaaagaaccc attaaccata
       61 atgtagaaat taataccaat aaaaatttgc gtgagaaaga tagaattcag agaagtggtg
      121 ctgataggcg gatttgaacc gccgacctca cccttaccaa gggtgcgctc taccaactga
      181 gctatatcag cgcttggagc gggcagcggg aatcgaaccc gcatcattag cttggaaggc
      241 taaggtaata gccattatac gatgcccgct gttctaaatt cgtctgacct acgcgattca
      301 aaatatcaga gatggtggag ggagaaggat tcgaaccttc gaaggctgag ccaacagatt
      361 tacagtctgc cccctttggc cgctcgggaa cccctccacg ataattgaat acttatttac
      421 gcctgagtta atggtgccga ctaccggaat cgaactggtg acctactgat tacaagtcag
      481 ttgctctacc tactgagcta agtcggcgtt gctgtgtcgt aagcaagtga tgtgcattat
      541 agggaaattt taacagcgtg caagtgtttt ttaaaaaaat attaaaaaaa gcgttctttc
      601 gatttttaaa tatacaaaat gactattttt tgtaaaatac aacggatttt ctctgcataa
      661 ctacggcaaa ataagtgcat atattgtata gttacgccct taatttggta tttaattacc
      721 ttaatattcc agcaaaaaat tgagattttg gctatgagcc ttgaaaaaac cagcaaaatt
      781 actccttttc tcacttttga tcgccaacaa tgggctgatt tacgcaaatc cgttccattg
      841 aagctgaccg agcaagacct aaaaccgctt ttaggcttta atgaagatct ttcattagaa
      901 gaagtacgca ctatttattt accgcttgcc cgtttaattc aatactatat agaagaaaac
      961 ttaaaacgcc agacagtctt acatcgcttt ctcggcattg aaccgccaaa agtcccttac
     1021 attattagta ttgccggcag cgtatcggtt gggaaaagta cctctgcccg tattctgcaa
     1081 gctctgctct cccattaccc taaagagcga aaagtggatt taattaccac cgacggtttt
     1141 ttatatccac ttgcaacgct aaccgaaaag aacttactca agaaaaaagg ctttccggaa
     1201 tcttatgata ttcacagcct gattcgcttt gtatctgata ttaaatccgg caaacgcaat
     1261 gtgaaagctc cgatttattc acatttgacc tacgatatta tcccaaatca atttaatacg
     1321 gtggatcaac ccgatattgt gattttagaa gggctaaacg tgttacaaag tggaatgaac
     1381 tacccgtcca gcccacataa tgtatttgta tcggactttg tggatttttc tatttatgtg
     1441 gatgccgaag aaagtttgct gaaaaaatgg tatatcaacc gtttcttgaa attccgccgc
     1501 agtgcctttg ccgacccaaa ctcctatttc caccattatg cgagtttgtc cgagcaagaa
     1561 gcgattgaaa ccgcctcaac gatttgggaa gagatcaacg gcttaaattt acgccaaaat
     1621 attctcccaa gccgagagcg tgccaacctc attttaatca aagggcaaga ccacgccatt
     1681 gaaacggtaa aattacgcaa ataatatttt gcaaataatt gggctttttc gaccgcttgt
     1741 aataccttaa aatccgttga ataccactca acggattttt tatttaaatc aatgcttatt
     1801 caactatttt ttggtaagct aacgactttg agagtgattg atattaggca tatacaatga
     1861 acaaaaaatt tctacttcct ttaattctct ttttggcgtt atctgtggca tttttggttc
     1921 aactcgctcg caactcgcaa ggcgatgatc cgaaaaaatt agaatcagcc ttaattggca
     1981 aaacagttcc gagctttaat ttagaatcgg tattagatga aaaacagaca atcgaccaaa
     2041 atatcgtcaa aaccggcaaa cctcgcctgc ttaacgtgtg ggcaacttgg tgtccgactt
     2101 gttatgccga acacgaatac ttaaccattt tggcaaaaca aggggtggaa attgtcggta
     2161 ttgattataa agacgaacgc ccaaaagcga ttaaattctt agccaattac ggcaaccctt
     2221 ataaagcgat tatttttgac ccgaaaggct cactcggttt agatttaggt gtttatggtg
     2281 cacccgaaac ctttattatt gacggcaacg gcgtgattca ataccgccac gccggcgatg
     2341 taaacgacca agtgtggaac caagtgctta aaccgattta tgatggatta aagtaaatgt
     2401 ttgtatttcc tgctgacatt aagaaatcta taaaaagcaa ttatcaaaga gaatataact
     2461 ttatttttat aatagttggt ttatcaacta ttataggaat aattct
//
LOCUS       DANLXO010000181         2480 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.185, whole genome shotgun sequence.
ACCESSION   DANLXO010000181 DANLXO010000000
VERSION     DANLXO010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.185"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            126..2402
                     /gene="gshAB"
                     /locus_tag="PXD69_002618"
     CDS             126..2402
                     /gene="gshAB"
                     /locus_tag="PXD69_002618"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HDL6284749.1"
                     /translation="MKLQKLIRENHLALLFQQGNFGLEKESQRVDRNGNIVTTPHPAV
                     FGNRSYHPYIQTDFAESQLELITPPNAKLEDSFRWLSAIHEVVLRSLPEEEYIFPLSM
                     PAGLPPEEQIQEAQFDNPEDVQYRQHLSKNYGKYKQMVSGVHYNFQLSTEFVEKAFAL
                     QTEYSELKAFQNALYMKLANNFLRYQWILLYLLAATPTVESQYFYEKSPLARGQLVRS
                     LRSSPYGYVNSEKVVVNHDSLESYVESLEANVANGLLIAEKEFYSNVRLRGGKKAREL
                     LENGVKYAEFRLFDLNPFAPYGIELNDAKFIHYFLLGMLWLEETSGQKEVEIGKRKLY
                     QVALEDPRTETAFRAEGEAILNQLLAMLEELSAGQESLDLVREKLAQFADPSKTLNGR
                     LIAAIEEVGSYKALGAKLAQTYKAQAFERFYALSAFDNMELSTQALFFDLIQQGIEVE
                     VLDENDQFLALKFGDHLEYVKNGNMTSRDQYISPLIMENKVVTKKVLAKAGFNVPKSV
                     EFTNLEQAVAHYPLFEGKAVVIKPKSTNYGLGITIFQQAVKNREDFAKAVEIAFREDK
                     EVMVEDYLVGTEYRFFVLGDETLAVLLRVPANVVGDGIHSVKELVERKNDDPLRGDGS
                     RSPLKKIALGEIEQLQLKEQGLTVDSVPAKGQTVQLRANSNISTGGDSIDMTDQMHES
                     YRQIAVGIAQAMGAKVCGVDLIIPDLTKPAEPNLSSWGVIEANFNPMMMMHIFPYQGK
                     SRRLTKAVIKMLFPEIGN"
BASE COUNT          750 a          509 c          546 g          675 t
ORIGIN      
        1 gaagcagtat ttctgttata accaaatcat ctacttcatt ccaataaact aaaacccact
       61 atttcactaa gtctttcatt tgtgttattg tgccgataca tttttttgac tacaaaggat
      121 agatgatgaa actacaaaaa cttatccgag aaaatcattt agcattgctg tttcaacaag
      181 ggaattttgg gcttgagaaa gagagccaac gggttgatcg caacggcaat atcgttacta
      241 ctccccaccc tgccgtattc ggtaatcgct cttaccaccc ttatattcaa accgattttg
      301 ccgaaagtca gctagagtta atcactcccc cgaatgctaa attagaagac agttttcgtt
      361 ggctctctgc tattcacgaa gtggtattgc gttcgttgcc agaggaggaa tatatcttcc
      421 ctctcagtat gccggcaggc ttgccgccgg aagagcaaat tcaagaagca caatttgaca
      481 accctgaaga tgtgcaatat cgccaacacc tttccaaaaa ctatgggaaa tataagcaaa
      541 tggtaagcgg cgtgcattat aattttcaac tttcaacgga atttgtcgaa aaagcctttg
      601 ctttacaaac ggaatatagc gagctgaaag ccttccaaaa cgcactttat atgaagttag
      661 ctaataactt tttgcgttat caatggattt tgctctattt attggctgcc acgcctacgg
      721 tggaatcgca atatttttat gaaaaatcac cgcttgcgag agggcaactt gtccgcagct
      781 tgcgttcaag cccttatggt tatgtgaatt cggaaaaagt ggtggttaat cacgacagct
      841 tagaaagcta tgttgaaagc cttgaagcca atgttgccaa cggattatta attgccgaaa
      901 aagaattcta ttccaatgtg cgtttacgag ggggcaaaaa agcccgtgag ctattggaaa
      961 acggtgtgaa atacgccgaa ttccgtttat ttgatttaaa ccctttcgcc ccttacggca
     1021 ttgagctgaa tgatgccaaa tttatccatt atttcttact cggtatgctt tggctggagg
     1081 aaacaagcgg tcaaaaagag gtcgaaatcg gcaaacggaa actttaccaa gtcgcacttg
     1141 aagatccaag aacagaaacc gctttccgtg ccgaaggtga agccatttta aatcaacttt
     1201 tagcgatgct tgaagaatta tctgccggtc aggaaagcct agatttggtg cgggaaaaat
     1261 tagctcaatt tgctgatcca agcaaaaccc tgaacggacg tttaattgcc gcaatagagg
     1321 aagtcggcag ttataaagca ttgggggcta aattggctca aacctataag gcacaagcct
     1381 ttgagcgttt ttatgcgtta tcggcatttg ataatatgga actttccact caagccctgt
     1441 tttttgattt gatccaacaa gggattgagg tggaagtact ggacgaaaac gatcaattcc
     1501 tcgccctaaa atttggcgat catttggaat atgtgaaaaa cggcaatatg accagccgag
     1561 atcaatacat ttcaccgctg attatggaaa acaaagtggt gacgaaaaaa gtattggcaa
     1621 aagccggctt taacgtgccg aaaagcgttg aatttaccaa ccttgaacag gctgtggcac
     1681 attatccgct atttgaaggc aaagcggtgg tgattaagcc gaaatcgact aactatggtt
     1741 tagggattac catcttccaa caagcggtca aaaatcgaga agattttgca aaagcggttg
     1801 aaattgcgtt ccgtgaagac aaagaggtga tggtggaaga ctatttagtc ggtactgaat
     1861 accgcttctt tgtactgggc gatgaaaccc ttgcggtgtt actgcgtgta ccggcgaatg
     1921 tagtgggaga tggcattcac agtgtaaaag agctggtgga gcgtaaaaat gacgatccgc
     1981 tacgtggcga tggctctcgt agcccgttga aaaaaattgc cttaggtgaa attgagcagt
     2041 tacaacttaa agagcaaggc ttaaccgtag attccgtacc ggcgaaaggt caaacagttc
     2101 aactgcgtgc caattccaac atcagcaccg gcggcgattc gattgatatg accgaccaaa
     2161 tgcacgaaag ctatagacaa attgcagtgg gaattgctca ggcaatgggg gctaaagtgt
     2221 gtggggtgga tttgatcatt cctgatctca ccaaacctgc cgagccaaat ttaagctctt
     2281 ggggcgtcat tgaggcaaac ttcaacccaa tgatgatgat gcacattttc ccttaccaag
     2341 gcaaatcccg ccgtttaacc aaagcggtaa tcaaaatgct gtttcctgag ataggcaatt
     2401 aaattttctc tctatacctc ttttaaggag aatttactca agaattctcc ttaatttatt
     2461 tctaaagttt tactccaatt
//
LOCUS       DANLXO010000182         2435 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.187, whole genome shotgun sequence.
ACCESSION   DANLXO010000182 DANLXO010000000
VERSION     DANLXO010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.187"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(41..466)
                     /locus_tag="PXD69_002619"
     CDS             complement(41..466)
                     /locus_tag="PXD69_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL6284750.1"
                     /translation="MYKHILVAVDLSEESLVLVRKGAALAEKCGAKLSLIHVDVNFSD
                     LYTGLIDINMSSVQYSVVEETNTALAELASKVNYPVSECLNGTGDFSQVLEEAVEKHN
                     VDLLITGHHQDFWSKFMSSTRRVMNNITVDMLVVPLADE"
     gene            697..1470
                     /locus_tag="PXD69_002620"
     CDS             697..1470
                     /locus_tag="PXD69_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HDL6284751.1"
                     /translation="MKIVSEPKTSGRHTCTIHCQNCSISQLCLPFTLNETELTQLDNI
                     IERKKPIQKSQVIFKLGDELRSLYAIRSGTLKAYTLSESGEEQITGFHLPGDLIGFDA
                     ITNMQHEGYAQALETSMICEIPFDILDDLAGKMPKIRHQIMRLMSNEIKSDQEMILLL
                     SKMNAEEKLAAFLYNLSQRYSARGFSAKEFRLTMTRGDIGNYLGLTIETISRLLGRFQ
                     KSGMISVQGKYIIINRMEELAELAGAIKPQQNIIAQTTA"
     gene            1614..2405
                     /locus_tag="PXD69_002621"
     CDS             1614..2405
                     /locus_tag="PXD69_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL6284752.1"
                     /translation="MGILTGKRILVTGLASNRSIAYGIANAMKQQGAELAFTYLNDKL
                     KPRVEEFAKEFGSDIVLPLDVATDESITECFTELSKHWEKFDGFVHAIAFAPGDQLDG
                     DYVNAATREGYRIAHDISAYSFVAMAQAARPFLNENAALLTLSYLGAERAIPNYNVMC
                     LAKASLEAATRVMAADLGKEGIRVNAISAGPIRTLAASGIKNFKKMLSAFEKTAALRR
                     TVTIDDVGNSAAFLCSDLASGVTGEVLHVDAGFSVMAMGELGDEE"
BASE COUNT          758 a          482 c          442 g          753 t
ORIGIN      
        1 ataaactgtc tcaagcggtt atttttcatt cactttcttg ctattcatct gctaatggca
       61 caaccagcat atcaacagtg atattattca tgactcgacg agttgaagac ataaatttac
      121 tccagaagtc ctgatgatgg ccagtgatga gtaaatcgac attgtgtttt tctacggcct
      181 cttccaaaac ttgactaaaa tctcccgttc cgtttaaaca ttcagataca ggataattta
      241 cttttgaggc aagttcagcc agtgccgtat ttgtttcttc aacaacactg tattgtaccg
      301 aagacatatt aatatcaatt aatcctgtat agagatccga aaaattaaca tcaacgtgaa
      361 tgagggaaag tttagctccg catttttctg ctaacgcagc ccccttacgc actaaaacaa
      421 gactttcttc agaaagatcc actgcaacta agatatgttt atacataata tgctccttgc
      481 ttgtgagagt tgtttacttt gtgtataaac atactaacac actctttttg ataaaaactt
      541 gaagtagatc tcaaaaataa aaatttgatt atatttttca tacctctttg taagtatttt
      601 tatttttcct tggtatactt tgcttcatgt aaatttaatg gtaaactttg ttctaaatca
      661 aatttaggaa tacttttcta atttaaggtt gaatggatga aaattgtatc agaacctaaa
      721 acaagcggac gtcatacttg cacaattcat tgtcaaaatt gcagtattag ccaactatgc
      781 ttacctttta ctcttaatga aacggaatta actcaactag ataatattat tgagcgtaaa
      841 aaaccgattc aaaaatcgca agttattttt aagttaggtg atgaactgcg ttcgctttat
      901 gctatccgtt ctggaacatt aaaagcctat accttaagtg aaagtggtga agagcaaatt
      961 accggtttcc atttacctgg cgatctaatt ggctttgatg caattaccaa tatgcagcac
     1021 gaaggctatg ctcaagcact cgaaacctca atgatttgtg agattccatt cgatatttta
     1081 gatgatcttg ccggcaaaat gccaaaaatt cgccatcaaa ttatgcgttt gatgagtaat
     1141 gaaattaaaa gcgatcaaga aatgattcta ttgctctcaa aaatgaatgc ggaagaaaaa
     1201 ctagctgcat ttttgtataa tctttcccaa cgttactcag cccgtggttt ctctgcaaaa
     1261 gagttccgtc taactatgac ccgtggagat atcggcaatt atcttggttt aaccattgaa
     1321 actatcagcc gtttattagg gcgtttccaa aaaagcggta tgatttcagt acaaggaaaa
     1381 tatattatta ttaaccgtat ggaagaatta gccgaattag ccggggcaat caaaccgcag
     1441 caaaatatta ttgctcaaac taccgcttaa tttatcttac caaatccctt tttgaaacct
     1501 cgttcaaaaa gggatttctg atccgatgag ccgctaactc catttgcccg tttttcctat
     1561 atccgttata atcgacacaa ttttgcccca atcaatataa aagaggaatt tttatgggta
     1621 tcttaactgg taaacgtatt ttagtgacag gtttagcaag caaccgttcg atcgcttacg
     1681 gtattgcaaa cgcaatgaag caacaaggtg cagaacttgc attcacctac ttaaacgata
     1741 aattaaaacc acgagttgaa gaatttgcca aagaatttgg ctcagacatt gtccttccgt
     1801 tagatgtagc aaccgatgaa agcattactg agtgctttac tgaattaagc aaacattggg
     1861 aaaaatttga cggttttgtt cacgctatcg catttgcacc gggcgatcaa ttagacggcg
     1921 attatgtaaa tgccgcaacc cgtgaaggtt atcgtattgc acacgacatc agtgcctata
     1981 gctttgttgc aatggctcaa gctgctcgcc ccttcttaaa tgaaaatgcc gcccttttaa
     2041 ccttaagtta cttaggtgca gagcgtgcaa tccccaacta caatgtaatg tgcttagcca
     2101 aagcctcttt agaagctgca acccgtgtaa tggcagccga tttaggtaaa gaaggtattc
     2161 gtgtaaatgc gatttcagcc ggcccgatcc gtacattagc tgcttcaggc attaaaaact
     2221 tcaagaaaat gctttctgct ttcgagaaaa ccgctgcttt acgccgcacc gtaactattg
     2281 atgatgtagg taactctgca gctttcttat gctcagattt agcctctggt gtaacaggtg
     2341 aagtgttaca cgttgatgcc ggcttcagcg taatggcaat gggtgaatta ggcgacgaag
     2401 agtaattcct ataaaaataa cggactcaat tgagt
//
LOCUS       DANLXO010000183         2377 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.188, whole genome shotgun sequence.
ACCESSION   DANLXO010000183 DANLXO010000000
VERSION     DANLXO010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.188"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(345..1586)
                     /locus_tag="PXD69_002622"
     CDS             complement(345..1586)
                     /locus_tag="PXD69_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HDL6284753.1"
                     /translation="MMNKRIYVFADWETFSQPELVGVLSSDVVRGKENFRFSYDNEWL
                     SSPYVQQIDPNLYLYPGEQYSTDTQNFHIFLDSCPDRWGRLLMKRREAALASQENRKP
                     KLLIESDYLLGVHDMNRMGALRFKTELNGPFLDNNTRLAAPPLSSLRELEFAAIQLES
                     SDNVDDPDYLKWLHMLISPGSSLGGARPKASVIDELNQLWIAKFPSRYDDYDIALWEY
                     LAYRLAIQAKIEMATCRIERFNQEHHTFLTQRFDRHCGKRRHFTSALTQLGYYDGDYE
                     ASYLEIAQFLTESGSNTRIDLAQLWRRIVFNIAISNTDDHLRNHGFIYAQEGWILSPA
                     YDLNPVPLSQGLHLNITDSDNRLDYQLAFDVADFFQLSKQQAVQIYDEVLKEINNWQN
                     VAKEIGIPRQEQEQMKFAFNV"
     gene            complement(1586..1897)
                     /locus_tag="PXD69_002623"
     CDS             complement(1586..1897)
                     /locus_tag="PXD69_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284754.1"
                     /translation="MVIIMLSKTKSPTLFPKYQNALLQLGENIRLASKRRMFTQTLLA
                     QRTGLSRVTVRKIMNGDPTVAIGYYLMVLGVLGLEQDFTDVGKDDELGRKLQDIELLR
                     K"
BASE COUNT          719 a          454 c          410 g          794 t
ORIGIN      
        1 taaatgttag tttttctgat gtctgccatc tgctaggcat tatatatgcc tagattagtt
       61 tcctacattt gcgtttttaa ggctacgctt ccttgcggat atggttgaga aaaaagtcaa
      121 gtgttactaa tggttttata agatgttggt ttgttctggt gtctgccacc gctaggtctt
      181 tataccctag attagtatca ggtctttctg gtgcctgcca ccgctaggcc tttacatcct
      241 agattaatat cagattgaca atgagccaac aactcattgc gttattaagg taacgctact
      301 tttttagaac atagactacg atgattggtt ccacaagtca attactatac attaaatgca
      361 aatttcatct gctcttgctc ttggcgtgga ataccaattt cttttgcgac attttgccaa
      421 ttattaattt ctttcagtac ttcatcataa atctgtacgg cttgttgctt agataattga
      481 aaaaagtcag caacatcaaa ggcgagctga taatccaatc ggttatcgct gtctgttatg
      541 tttaaatgta atccttgaga tagtggtact gggtttaaat cgtatgcggg agataatatc
      601 cacccctctt gagcgtagat aaatccgtgg ttacgcaaat gatcatcagt attcgaaata
      661 gcaatattga atacaattct tctccatagt tgagccaagt caattcgagt atttgaacca
      721 ctttctgtta aaaattgagc aatctcaagg tagcttgcct catagtctcc gtcataataa
      781 cccagctggg ttaatgctga cgtaaaatgg cgacgttttc cacaatgtcg atcaaatctt
      841 tgtgtcaaaa aagtatggtg ttcttggtta aagcgttcaa ttctacaagt agccatttca
      901 attttggctt gaatagccag tcgataagct aaatattccc aaagagcaat atcataatca
      961 tcgtaccgac ttggaaattt ggcaatccat agttgattta gttcatctat taccgaagct
     1021 tttggtctag ctccgcctag tgacgaccct ggtgatatca acatatgaag ccattttaaa
     1081 taatccggat cgtccacatt atcactgctt tcaagttgta ttgctgcaaa ttctaattct
     1141 cttaaggaag acagtggtgg tgctgcaaga cgagtattat tgtccaaaaa tggaccattc
     1201 aattcagttt taaaacgtaa agcccccatt ctattcatat cgtgtacgcc taaaaggtaa
     1261 tcactttcta ttagtaactt aggtttacga ttctcttgac tagctagagc tgcctcccga
     1321 cgtttcatta acaatctacc ccatctatca gggcaagaat ctaaaaagat atgaaaattt
     1381 tgtgtatctg tactgtattg ctctccaggg taaaggtata agttaggatc aatctgctgt
     1441 acatagggtg aacttaacca ctcgttatcg tagctaaaac ggaaattttc tttgcctctc
     1501 actacatcag aagaaagcac cccaactaat tcaggctgtg aaaaagtttc ccaatctgca
     1561 aacacataaa ttcgtttatt catcattatt tccttaataa ttcaatatct tgcaatttac
     1621 gtcctaactc atcatccttt ccaacatcag tgaaatcttg ttctagaccg agaacaccta
     1681 aaaccattag gtagtatcca atcgcaacag ttggatcacc attcataatt tttctcactg
     1741 ttacacggct aagcccagtt ctttgagcca ataatgtttg agtaaacatt ctcctttttg
     1801 aggctagcct aatattttct ccaagttgaa gcaaggcatt ttggtactta ggaaacagag
     1861 ttggtgattt tgttttactg agcattatta ttaccatttt tatgtttttt ggaaattata
     1921 atgtccattt atagcaattg caagagcagt tatgtaaaca gtaaaatagg tagagagggt
     1981 ttttcggaaa aaaatatctg gtgaagtttt gactaaattt gaattaaaag aaaaaataga
     2041 ttttttcaaa taaaatcaat ctaaaaaatg attttcaggc tttacaaact tgaaagaatg
     2101 tgtaagatct agaacgtctg aaattcggac ggaaaatccc aatggatgta ttggctggat
     2161 acatcgtagt aactgtgtat ttgcgaatat gatttgaaca atcctacaca aacgattcaa
     2221 aatccgccgc ccataaagcg tgtcggttcg agtccgacca ctggcaccac tctaatatct
     2281 tttcttattt actattaaga atttctctat tatcttccta tatcaatttt tctcaaaata
     2341 ttgtatttat aaacccgtat agatgggaac tttagcc
//
LOCUS       DANLXO010000184         2343 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.189, whole genome shotgun sequence.
ACCESSION   DANLXO010000184 DANLXO010000000
VERSION     DANLXO010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.189"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..733
                     /locus_tag="PXD69_002624"
     CDS             <1..733
                     /locus_tag="PXD69_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL6284755.1"
                     /translation="EEDKKTEEDKKTEEDKKTEEDKKTEEDKKTEEDKKTEEDKKAEE
                     AKKIAEAKGIGNKEYKDGLNELEEKNETGKNGEEIRTYGYLYNSHYSVVTAKMKQTLQ
                     ENGRQMEPTVEVKGLKTENLPTEGKATYKGEAFDSHGNNSNSVVGGELIYNVDFSSRT
                     GSGLVKNVQGGSIELAQGEIKNDSIIASAHQKYNDQAVGNGSYNIQFFGPNAEEIGGK
                     IELNGEGEGSMKQMLGIAGTREEQK"
     gene            782..2176
                     /locus_tag="PXD69_002625"
     CDS             782..2176
                     /locus_tag="PXD69_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL6284756.1"
                     /translation="MYKKHFLFLLVSPLVMAETVEFQQDPKEFDGQRQAVKFEQEIAK
                     KDLKLTAYLEEDNSLKGIEQHINQAILRQDWAKLERLLGDYAKQEQFDPLLLDYALAA
                     LAYAKKDYRSAAFYYQQLLKKQPDLTYPRFDLALILKEDYRYREAEQEFKQLKTDDLR
                     NAVNSALAQIEEEESWKPDFYLQYTQTNNVNNASSSPTVNVNGRIFIKESDSLPQSAK
                     GVRYGVGLSKMRNIGGNHFVGVDLGYNGVYYWNNHDYSEQSVSLTPKYSYRTATYRIG
                     VSPFIEQNWLGSSRYNYQFGSSINAVKLFERGLISGSFSHLQKRYSEQHIADRYNGYR
                     NQLTLGTQWQAVKNWRFFANLNASREITREKAQSSNKWLATIGVIYQTPSWASSVSVG
                     YGKRYFADKHYLFGYKRQDKEYQANVAVWNRSWHWQGIVPKLNFRYQKIDSNIADFYS
                     RSNKEVFMTLEKLF"
BASE COUNT          818 a          383 c          527 g          615 t
ORIGIN      
        1 tgaagaggat aaaaaaactg aagaggataa aaaaactgaa gaggataaaa aaactgaaga
       61 ggataaaaaa actgaagagg ataaaaaaac tgaagaggat aaaaaaactg aagaggataa
      121 aaaggctgaa gaagcaaaaa aaattgcaga ggcaaaagga attggcaata aagaatataa
      181 agatggatta aatgagttag aagaaaaaaa tgaaacaggt aaaaacggag aagagattcg
      241 aacctatggt tatctctata acagccatta ttccgttgta actgccaaaa tgaaacaaac
      301 tttacaggaa aatggtcgtc aaatggaacc tacggttgaa gtgaaagggc ttaaaactga
      361 gaatttaccg acagagggca aagcaacata taaaggagaa gcctttgatt ctcacggtaa
      421 taacagcaat tcagtagtag gtggagaatt aatctataat gttgatttct ctagtcgtac
      481 cggatcaggt ctagttaaaa atgtacaggg cggttctatc gagttagcac aaggcgaaat
      541 aaaaaatgat agtattatag cttctgctca ccaaaagtat aatgatcagg ctgttggaaa
      601 tggtagttac aatatccaat tctttggtcc aaatgcagaa gaaattggag ggaaaattga
      661 gcttaatggt gagggcgaag gctcaatgaa gcagatgtta ggtattgcag gaacccgaga
      721 agaacaaaaa taacatttaa tacccaatgc cgtttaatct taaacggcat tcttttttac
      781 tatgtataaa aaacattttc tatttttact tgtttcgcct ttagtaatgg cggaaacggt
      841 tgagtttcag caagatccca aagagtttga tgggcagcga caagcggtta aatttgagca
      901 agaaattgca aaaaaggatt taaaattaac cgcttacttg gaggaagata attctcttaa
      961 aggtattgaa cagcacatta accaagcgat tcttagacaa gattgggcga agctggaaag
     1021 gctgcttggc gattatgcaa agcaagagca atttgatccg ctacttttag actatgcttt
     1081 ggcggcattg gcttatgcta aaaaagatta tcgctctgcg gcgttttatt atcagcagtt
     1141 gctgaaaaaa cagcctgatt taacctaccc tcgttttgat ttggctctga ttttaaaaga
     1201 ggattatcgc tacagggaag cagagcaaga atttaagcaa ctcaaaaccg atgatttacg
     1261 caatgcggtg aacagtgcgt tggctcaaat agaggaggaa gagagctgga agccggattt
     1321 ttatttgcaa tatactcaaa ccaacaatgt gaataatgct tcttcgtcgc caacggtaaa
     1381 tgtaaacggg cggattttta ttaaagaatc agacagcttg ccgcagtcgg caaaaggcgt
     1441 aagatatggc gttggcttga gtaaaatgcg aaatatcggc ggtaatcatt ttgtgggagt
     1501 cgatcttggc tataacggcg tttattactg gaataaccac gattatagcg aacagtcggt
     1561 ctcactaaca ccaaaatata gctacagaac ggcaacttat cgtatcgggg tttcgccctt
     1621 tattgagcag aattggctgg gtagctcacg gtataactat caatttggta gcagtatcaa
     1681 tgctgttaaa ctttttgaac gagggctgat ttccggctca ttcagccatc tgcaaaaacg
     1741 ttatagtgaa cagcatattg ccgaccgtta caatggttat cgcaaccaac tcacgctagg
     1801 tacgcaatgg caagcggtca aaaattggcg attttttgca aatcttaacg ctagccgtga
     1861 aattacccgt gagaaagctc aatcttccaa taagtggctg gcgaccattg gcgtaattta
     1921 ccaaacccca agctgggcaa gttcggtaag tgtcggatat ggcaagcgtt attttgctga
     1981 taaacattat ctgtttggct ataaacgcca agataaggaa tatcaagcga atgtggcggt
     2041 gtggaatcga agttggcact ggcaagggat tgtgccgaaa ttgaatttcc gttatcaaaa
     2101 aatcgatagc aatattgccg atttctactc tcgtagcaat aaagaagtct ttatgacctt
     2161 agagaaacta ttttaaggct gtgtatgaat gtcggggaga aaaattttct ccccgatatt
     2221 tatgtgtaga agatcagact tgatctgaca attcactcta aaaagtgaga gtttcccgtt
     2281 tagaatatga gtgtcaaaaa tcaatctaaa caaaaaggaa actctcatgt tttattctaa
     2341 caa
//
LOCUS       DANLXO010000185         2336 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.190, whole genome shotgun sequence.
ACCESSION   DANLXO010000185 DANLXO010000000
VERSION     DANLXO010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.190"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(60..689)
                     /locus_tag="PXD69_002626"
     CDS             complement(60..689)
                     /locus_tag="PXD69_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDL6284757.1"
                     /translation="MDIFIQGFIVCFGLIVSIGAQNAFLLKQGILKQHIFWIALLCFL
                     GDVFLMTIGVLGLGTLIAELPVVSFIISLLGAIFLLSYGSRSFISVFKSGEYLVASGE
                     NATSLKKALLITFAITFLNPHVYIDTVVIVGSIGGKLDFNGKIYFLAGALLCSFIWFF
                     GIGYGASLLSPYFAKRRTWQILDAVTGLIMYFIAFSLLIYTYQLALQIF"
     gene            793..1440
                     /gene="udk"
                     /locus_tag="PXD69_002627"
     CDS             793..1440
                     /gene="udk"
                     /locus_tag="PXD69_002627"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDL6284758.1"
                     /translation="MTDTSQTSSCVVIAIAGASASGKSLIASTIYKELKNELGTDNIG
                     IISEDAYYRDQSHLTMEERIKTNYDHPNSMDHHLLVEHLRQLKQGNAIEIPEYDYTEH
                     NRKTTTKHFEPKKIIILEGILLLTDENIRNEINVSIFVDAPLDICFIRRLQRDMVERG
                     RSMESVISQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAIDILKAQIKQLLK"
     gene            1455..2036
                     /gene="dcd"
                     /locus_tag="PXD69_002628"
     CDS             1455..2036
                     /gene="dcd"
                     /locus_tag="PXD69_002628"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDL6284759.1"
                     /translation="MRLCDTDIKRYLDEGIIAITPRPSDDKISGATADVRLGNSFRVF
                     REHKTPYIDLSGPREEVAAQLNKVMSDEIIIGDDEAFFLHPGDLALATTLESVSLPAN
                     IVGWLDGRSSLARLGLMVHVTAHRIDPGWEGKIVLEFFNAGKLPLALRPNMAIGALSF
                     EILSGDAAKPYNARKDAKYKNQQSAISSRINQD"
     gene            2114..2269
                     /locus_tag="PXD69_002629"
     CDS             2114..2269
                     /locus_tag="PXD69_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009041538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDL6284760.1"
                     /translation="MLHYAVVFFVIAIIAALLGFGGIAGSATEIAKILFFVFLILTVI
                     SFFFKKK"
BASE COUNT          803 a          436 c          396 g          701 t
ORIGIN      
        1 cattgctact aatatagcaa aaaagcccgt cattcatcaa tgaaaaaatt taaactccac
       61 tagaaaattt gcagagcaag ttgataagta taaatcagta aactaaaagc gataaagtac
      121 ataattagcc cggtaacagc atctaaaatt tgccaagttc ttcgctttgc aaaataaggg
      181 gaaagtaagc ttgctccata acctatgcca aaaaaccaaa taaatgagca aagtaatgca
      241 cctgctaaaa agtatatttt accgttaaaa tctaatttcc caccgatact gcctacaatc
      301 acaaccgtat caatataaac gtgaggattt aagaatgtaa tcgcaaaggt aatcagtaaa
      361 gcctttttta agctcgttgc attctctcca cttgccacaa ggtattcacc acttttaaat
      421 acgctgataa atgaacggct accgtagctt aatagaaaaa tggcccctaa aagcgaaata
      481 atgaaactta caacaggcaa ttccgcaatt aacgtgccta agcctagcac acctatcgtc
      541 attaaaaata catcacctaa aaaacagagc aatgcaatcc aaaatatgtg ttgttttaaa
      601 atcccttgct ttaataaaaa ggcattttgt gcgccaatag agacaattaa gccaaaacac
      661 actataaatc cttgaatgaa aatatccatt ttttctccaa aatcgcataa caagcggtca
      721 attatacaaa aaattttgca aaacttcggt ataatttatc gaatactctt ttgactgaat
      781 aggaaatttt ttatgactga tactagccag acttcatctt gcgttgtcat tgcgattgcc
      841 ggcgcatctg cctcaggtaa gagcctgatt gcctcaacca tctataaaga actcaaaaat
      901 gaattgggaa cagataatat cggtattatt tccgaagatg cttattatag agatcaatct
      961 catctaacaa tggaagaacg gattaaaacc aattacgatc accctaattc aatggatcat
     1021 catttattgg ttgaacattt acgccaatta aaacaaggta atgcgattga aattccagaa
     1081 tatgactata ccgaacataa tcgtaaaacg accacgaagc actttgaacc aaagaaaatc
     1141 attattttag aaggtatttt attgctgaca gatgagaata ttcgcaatga aattaatgtt
     1201 tctattttcg tagatgctcc tctggacatc tgctttatcc gccgcttaca acgtgatatg
     1261 gtggaacgtg gacgttcgat ggaatcagtg attagtcaat atcgcaaaac cgttcgccca
     1321 atgttcttac aatttatcga accctctaaa caatatgctg atattattgt gccaaaaggt
     1381 ggcaaaaacc gtattgccat tgatattctt aaagcacaaa ttaagcaatt actaaaataa
     1441 aataggagct aaatatgcgt ttatgtgata cagatattaa acgttactta gatgaaggta
     1501 ttattgccat aacgcctcga ccttcagacg ataaaatttc tggcgccact gcagatgtgc
     1561 gtttaggtaa ttcgtttcgt gtatttcgtg aacataaaac gccctatatt gatttaagtg
     1621 gccctagaga agaagttgcc gctcagttaa ataaagtgat gagtgatgaa attatcatcg
     1681 gtgatgatga agcatttttc cttcatcccg gtgaccttgc actcgcaaca acccttgaat
     1741 cggtttcctt accagccaat atcgttggat ggttagatgg tcgttcgtca cttgctagat
     1801 taggcttaat ggtacacgtt accgcccaca gaatcgatcc gggttgggaa ggcaaaattg
     1861 tattggaatt ttttaatgct ggaaaattac ccctagcttt acgccctaat atggcaattg
     1921 gcgcattaag ctttgagatt ttaagtggtg atgctgcaaa accctataat gcgcgaaaag
     1981 atgcaaaata taagaaccag caaagtgcca tttcaagtcg gattaatcaa gattaatata
     2041 gtacatgcct tgcaatcata cattaactat gttagttttt taatcagttt attacacagt
     2101 aaggagtata actatgttac attatgcagt cgtatttttt gtcatcgcta taatcgcagc
     2161 gctattagga tttggtggta ttgctggaag tgctactgaa attgccaaaa ttctcttttt
     2221 tgtcttttta atacttactg ttatttcgtt cttcttcaag aaaaagtgac acagttaaac
     2281 ctaatttttt aagttaaaat atagttcaaa aaaacagttg gtaatggata tttata
//
LOCUS       DANLXO010000186         2302 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.191, whole genome shotgun sequence.
ACCESSION   DANLXO010000186 DANLXO010000000
VERSION     DANLXO010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.191"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..197
                     /locus_tag="PXD69_002630"
     CDS             <1..197
                     /locus_tag="PXD69_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HDL6284761.1"
                     /translation="TSELLPVVIEMLVSRKLIPDLNALFGQLPESMWYFLNIFQIPMA
                     ISLMISAMISRFVRRMPFIG"
     gene            207..746
                     /locus_tag="PXD69_002631"
     CDS             207..746
                     /locus_tag="PXD69_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284762.1"
                     /translation="MAVSAYIGIPGSGKSYEVVKSVILPAVASNRRVVSNIYGLNKEK
                     IHQYLLRKNKKLMIEELGEVIYVTNEQCLESDFLPSMDEQDSFCKAGDLIIIDEVWRI
                     WGNDKDIPKNHRSFIAEHRHFADPITGVTCDLVVINQDISQIPRFIKEGLRQLTECKN
                     TLVWGCVIVIGLMFFKERI"
     gene            677..1240
                     /locus_tag="PXD69_002632"
     CDS             677..1240
                     /locus_tag="PXD69_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284763.1"
                     /translation="MQKHVGLGLRNRYRVDVFQGKNLAKKNRTNSYQEKYDKKIFELY
                     KSYESDGAREAVTDSRQSIFSSFWVKVWIILLPLALFYCGYNLYIFLNGSESEVSHNT
                     EQAKFASDENHNDIVIHLLPTIGKPLSTKWRITGELKRDNKSFVILADNENRLRLEPS
                     SQFSFSGRMLQGEIDGGIVSYFSGESK"
     gene            1237..>2302
                     /locus_tag="PXD69_002633"
     CDS             1237..>2302
                     /locus_tag="PXD69_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HDL6284764.1"
                     /translation="MKIHQLGLLLMISSFSYAKNVDFKLEAVPLPKAISIIYDEVLQK
                     PYMLDPKLSNDSRVISFHTTEQQNFEQFIQRYFSNMNISVSEKKGVVYIGHIEPKQPK
                     VIKRSFVYSPIHRDVDYLASFLKDGTEGNQVFASGDKLVYYGTSEDIARVKSILKSID
                     TKSREVVVTGYVFEVQNIEKEGSGINLLAKLLSGKLGISVGYKQSYENFITVNAGNLD
                     AMFELFRTDQRFRVVSSPTLRVKSGSRGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSS
                     GVIFDIQPTIKDKAIDLKIQQLSNFIKTDTGVNNSPTLVKRDLVTDVTVKSGDVIVLG
                     GLAENKISNGETSFSLLPKGW"
BASE COUNT          770 a          319 c          475 g          738 t
ORIGIN      
        1 taacttctga actacttcct gtagtaatag agatgcttgt gtctagaaaa ttgatacctg
       61 atttaaatgc gttatttggg caattgcctg aaagtatgtg gtatttttta aatatttttc
      121 agataccaat ggctatttct ttaatgattt cagcaatgat ttcacgtttt gttagacgta
      181 tgccatttat tggatagagg agtgctatgg ctgtttcagc gtatataggg attcctggaa
      241 gcggcaaatc gtatgaagtg gttaagtcag taattttacc tgctgttgct tcgaatcgaa
      301 gagttgtttc caacatttat ggattaaata aagagaaaat tcatcaatat ttactgcgta
      361 aaaataaaaa attaatgatt gaagagcttg gtgaagtcat atatgtaacg aatgaacaat
      421 gcttggaatc ggatttttta ccatcaatgg acgaacaaga ttcattttgc aaagctgggg
      481 acttgataat tattgatgaa gtttggcgta tttggggaaa cgacaaggat attccaaaaa
      541 atcatcgttc atttattgct gaacatcgac attttgcaga tcctataaca ggtgtaactt
      601 gtgatttagt cgtaataaat caagatattt ctcaaattcc aagatttatt aaagaaggat
      661 tgagacaact taccgaatgc aaaaacacgt tggtttgggg ttgcgtaatc gttatcgggt
      721 tgatgttttt caaggaaaga atttagctaa aaagaaccgg acaaattctt atcaagaaaa
      781 atatgataaa aaaatatttg agctttataa atcttatgaa tctgatggtg caagagaagc
      841 ggttacagat agtaggcaat ctatattttc atctttttgg gtcaaggtat ggattattct
      901 tttaccattg gcattatttt attgtggcta taacctttac attttcctaa atggttcaga
      961 gagtgaagta agccataata ctgaacaggc taaatttgct tctgatgaaa accataacga
     1021 tatagtaatt catttacttc ctactattgg aaaaccttta tcaactaaat ggcgaataac
     1081 aggggaacta aaaagggata ataaatcatt tgtgatctta gctgacaatg aaaaccgttt
     1141 aagacttgag cctagtagcc agtttagttt tagcggtcga atgttgcaag gagagataga
     1201 tggtggaata gttagttatt tttcgggaga atctaaatga aaatccatca attagggcta
     1261 ttgctcatga ttagctcatt ttcttatgct aagaatgttg attttaaatt agaagctgtg
     1321 ccgttaccga aagcaatatc aataatatac gatgaagtgc tacaaaagcc atatatgctt
     1381 gatcctaaat tatctaatga ttcaagggtt attagctttc atacaacaga gcaacagaat
     1441 tttgagcagt ttattcaacg gtatttcagc aatatgaata tcagtgtatc agagaaaaaa
     1501 ggtgttgttt atattggaca tattgaacca aaacagccga aagtaataaa acgtagtttt
     1561 gtgtattcgc ctattcatcg tgatgttgat tatttggcta gcttcctgaa agatggaaca
     1621 gaaggaaacc aagtttttgc aagtggcgac aagcttgtat attatggtac ttctgaagat
     1681 attgcacgag tgaaaagtat cttgaaatca atcgacacaa aaagccgtga agtagtggta
     1741 actggttatg tttttgaagt gcagaatatt gaaaaagagg gtagtggcat aaacttgtta
     1801 gcgaaattgc tatcaggaaa attaggcatt agtgttggtt acaagcaaag ttatgaaaac
     1861 tttatcaccg tgaatgcagg aaatttagat gcaatgtttg aattgtttcg cacagatcag
     1921 cgttttaggg ttgtcagcag tccgacatta agagtaaaat caggctcaag aggtaatttt
     1981 tcagtaggct ctgatgtccc tgtattatcg aatgtaacct atcaggacgg aaggcctatt
     2041 cagtcgattg aataccgttc aagcggtgta atatttgata ttcagccaac gataaaagat
     2101 aaagcgattg atttaaaaat tcaacaacta tcaaatttca tcaaaacaga taccggtgta
     2161 aataatagcc caacgttggt aaagcgtgat ctggtaacag atgttacggt taaaagcggt
     2221 gatgttatcg ttttaggtgg gttagctgaa aataaaatat ctaatggcga aaccagtttt
     2281 tcattgctac ctaaaggttg gt
//
LOCUS       DANLXO010000187         2269 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.192, whole genome shotgun sequence.
ACCESSION   DANLXO010000187 DANLXO010000000
VERSION     DANLXO010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.192"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(177..467)
                     /locus_tag="PXD69_002634"
     CDS             complement(177..467)
                     /locus_tag="PXD69_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284765.1"
                     /translation="MNNLSEFKLRYINNPYSNKDTFFIFDELSILLKSLTSDELKKIG
                     TAKNLADRQLNKQRKRCKRYVSEAYRLVEDNKEPYSKFFNHDGITAYNIKAF"
     gene            complement(517..1281)
                     /locus_tag="PXD69_002635"
     CDS             complement(517..1281)
                     /locus_tag="PXD69_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6284766.1"
                     /translation="MPNITPKLVINALEPAKEKGIGDTLKRAIRLLNEVMNFAVNADV
                     IEFNKCQNVGSNFSVAKSEHNPTIHPKELPQFLAALRDYNLSFQTKMLIKWQLLTMTR
                     SREASETLWSEIDLEAKTWTISAERMKMKRPHVIPLSRQAVEILERMRKITGNSPFVF
                     QSEMKPRQPMNSQTANRAIGLLGYAGTLTAHGMRSIASTYLNEQLVNYDVVEACLAHV
                     IKDQTRKAYNRSDYLDQRVDVMQQWADYVESCSTGI"
     gene            complement(1250..1729)
                     /locus_tag="PXD69_002636"
     CDS             complement(1250..1729)
                     /locus_tag="PXD69_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDL6284767.1"
                     /translation="MARVTTELNNTQIKNAKAQTKDYKLMDGKGLFLLVKKNGSKLWR
                     FRYKKPITGKESDLGIGSYPETTLAQARTIREEYRALLAENIDPLEHRQRLEAEALAE
                     IENTFYKVCLKWRDKCESRVKNGELQALTLKKNWRILEKYLLPCRLLYSKHHAKTSY"
BASE COUNT          642 a          409 c          420 g          798 t
ORIGIN      
        1 taaaaaaaca gctatttttc tatatgattt ttttatgatt gtttggcgga attttggttg
       61 aaatttaaat gtaaattata tgcttcataa tttcatattt tatgggtttt gtgattgtga
      121 tcataataca cattaaagag gtttcaggac gatataaaaa aggctctcta aatagattag
      181 aaagccttga tattgtatgc ggttatccca tcgtggttga aaaacttaga gtaaggttct
      241 ttattatctt caacaagacg ataagcctct gatacatacc ttttacatct ttttctttgc
      301 ttattaagtt gtctatctgc cagattttta gctgttccta ttttctttaa ttcatcggaa
      361 gtcagtgatt ttaatagtat gcttaattca tcaaatataa aaaatgtatc tttattagaa
      421 taagggttat tgatatatcg taatttaaac tcagaaaggt tattcatatt tgtacacctc
      481 taattaaaca agcggtcaaa ttccgccaaa aatttactaa atccccgttg agcagctttc
      541 tacataatcc gcccattgct gcattacatc tacacgctga tctaaataat cagaacggtt
      601 ataagccttt cgggtttggt ctttgataac gtgagctaaa caagcctcta ctacatcata
      661 attgactaac tgctcattca aataggttga ggcaatagac cgcataccgt gagccgttag
      721 agtgccggca tagcctaata agcctatggc tctgttggcg gtttggctgt tcatcggttg
      781 gcgtggtttc atttcgcttt gaaaaacaaa tgggctattc cctgtgattt ttcgcattct
      841 ttctaaaatt tcgaccgctt gccgtgaaag agggataacg tgagggcgtt tcatcttcat
      901 tctttcggct gaaatggtcc acgttttcgc ctctaaatca atttcactcc acaacgtttc
      961 gcttgcctct cgtgagcgtg tcattgttaa tagttgccat ttaatcaaca tcttagtttg
     1021 aaatgatagg ttgtaatcac gcaatgcagc taaaaattga ggtagctctt ttgggtgtat
     1081 cgttgggtta tgttcagatt tcgctacgct aaaatttgag cctacatttt ggcatttgtt
     1141 aaactcgata acgtccgcat ttaccgcaaa attcatcact tcattaagta gcctaattgc
     1201 tcgtttaagg gtgtcgccta tgcctttttc tttagcaggc tctaaagcat taataactag
     1261 ttttggcgtg atgtttggaa tagagtagtc ggcaaggcaa aagatacttt tcaaggattc
     1321 gccaattctt cttcagcgtt aaggcttgaa gttcgccatt ttttacacgg ctttcgcatt
     1381 tatcacgcca tttcaagcag actttataaa aggtgttttc tatttcggct aacgcttcag
     1441 cctctaatct ttggcggtgt tcgagtgggt cgatattttc cgctagtaat gccctatatt
     1501 cttctctaat cgttcttgct tgggctaggg tagtttcggg gtaactgcct atgcctaaat
     1561 cgctctcttt gccggtaatc ggctttttat acctaaaccg ccataacttc gagccgtttt
     1621 tcttaaccag caaaaacagc cccttgccgt ccattagctt gtagtctttg gtttgagcct
     1681 ttgcgttttt gatttgagtg ttatttaatt ctgtggtaac tctagccata aaaatttacc
     1741 taaaatcgca ttgtgcttta tcagaatcat aagggattta agggtatggg tttcataccc
     1801 ttttacgtta taccctcaaa tataccctta aaataagggg atgtaaacgc aagaacacga
     1861 aagaatacga atgaagaaat aatttaaaat tgctctaaag ccagtatcat caatggtttt
     1921 gcgtaagaat gcgaatgaag aaataagagt ggaaaattta agttggtccc agcctcctct
     1981 gaactcgctt ataacttatt gatttataaa gagataaaat aaactctaca aaaataggga
     2041 tcattttagg gatcatttac ataaaagcta tttattttcg tttataaaat gttcatttgt
     2101 gcggctaggt tggtttgtct ttcctagttg catttctatt ctattatcag caactattca
     2161 gcccttcagc aagatttcat ttttcataca tcagcataaa aatatttttt ctgtgcttgg
     2221 gtaaaatgtt tagggaaaat agggaaaata gggaaaatag ggaaaatag
//
LOCUS       DANLXO010000188         2090 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.193, whole genome shotgun sequence.
ACCESSION   DANLXO010000188 DANLXO010000000
VERSION     DANLXO010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.193"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..293
                     /locus_tag="PXD69_002637"
     CDS             <1..293
                     /locus_tag="PXD69_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284768.1"
                     /translation="GTIAARNMAANSINASHIVGSSITADKLNVNNLAAISANLGAIT
                     AGSININNRFKVSNAGVVEMRANSGNVGMVMNNNSIIVYDEQGRVRVKMGKL"
     gene            293..736
                     /locus_tag="PXD69_002638"
     CDS             293..736
                     /locus_tag="PXD69_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284769.1"
                     /translation="MLIGILCIIALAVLGLLFYFHKKKRKKVNKGVNMAEYGIQTFDT
                     ANVSTFSTNERLFKYIGTKNIKYGKFSFTVTEKYEGQLVFIISMLHSVHRKQATGYKT
                     NIPNLIHLENVSINDKTISGEVVCIFPFSLPADDSDYIQIVYGAY"
     gene            737..1336
                     /locus_tag="PXD69_002639"
     CDS             737..1336
                     /locus_tag="PXD69_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284770.1"
                     /translation="MSYGLSTFNINENFRSLSLQRKGRANFSNKIATIQAASDEIIVI
                     KYSDGQVCLLYRENGIATLATENATFAEYLIFSTNVPKSGGYGIEVYNSAGNVVFSSN
                     HKFLRPIEYVDLNPSKNVFRFTGQANRQYGIILSNFGFDFVINYDNGYSTSRSAKVSG
                     NFIEFGFCKYHYSGLYKTGMSYNSKAMYFNALVVDITGY"
     gene            1451..1744
                     /locus_tag="PXD69_002640"
     CDS             1451..1744
                     /locus_tag="PXD69_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284771.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGDDTDGEVTN
                     FVIITSEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYKHLKETGQIVV"
     gene            1905..2090
                     /locus_tag="PXD69_002641"
                     /pseudo
     CDS             1905..2090
                     /locus_tag="PXD69_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          743 a          321 c          399 g          627 t
ORIGIN      
        1 ccggcacgat tgcagctcga aatatggcag caaactcgat taatgcaagt catattgtag
       61 ggagttcgat cactgcggat aagctaaatg taaacaattt agcggcaata tcagcgaatc
      121 tcggagctat tacagctggt tctattaata tcaataatag attcaaggta agtaatgctg
      181 gagtagtcga aatgcgagcc aatagtggaa atgttggtat ggtaatgaat aacaatagta
      241 ttattgttta tgatgaacaa ggtagggtta gagtaaaaat ggggaaatta tgattctaat
      301 aggtatttta tgtattattg cattagcagt cttagggctg cttttttatt tccataaaaa
      361 aaaacgaaaa aaagtaaata aaggggtaaa tatggctgaa tatggtattc aaacttttga
      421 taccgctaat gtctctacat ttagtaccaa tgagcgatta tttaaataca ttggaactaa
      481 aaatattaag tatggtaaat tttcattcac ggtaacagaa aagtatgaag gacaacttgt
      541 atttatcatt agtatgttac attcagttca ccgaaaacaa gcaacaggtt ataaaacgaa
      601 tattcccaat cttattcatt tagaaaatgt ttcgatcaac gataaaacga tttcaggaga
      661 agttgtttgt atttttcctt ttagtctacc ggctgatgat tcagattata ttcagattgt
      721 atatggagca tattaaatga gttacggact atctactttt aacatcaatg aaaatttcag
      781 aagtttatcc ttacaaagaa aaggacgagc taacttttct aataaaattg caactattca
      841 ggcagcgtca gatgaaatta ttgtcattaa atattctgat gggcaagtat gtttgctata
      901 tcgagaaaat ggtattgcca cattagctac agaaaacgca acatttgctg aatatctcat
      961 ttttagtaca aatgtaccga aaagcggagg ttacggcata gaggtttata actcagcagg
     1021 aaatgttgta ttttcatcaa accacaaatt tttaagacct attgaatatg tcgatctaaa
     1081 tccatcaaaa aatgttttta gatttacagg gcaagcaaat aggcaatatg gcattatctt
     1141 atccaatttt ggctttgatt ttgtcattaa ctacgataac ggatattcaa catctagatc
     1201 tgccaaagta agtggtaatt ttattgaatt tgggttctgt aaataccatt attctggttt
     1261 gtataagacg ggaatgagtt ataattcaaa agcaatgtat tttaatgctc tggttgtaga
     1321 tataacaggc tattaaacat taaacgcctt catttaatag aggcgaacta aaattctgat
     1381 tacacattca tcgccgcttg tagcaataca agcggtcttt ttttatcaac aatccacaaa
     1441 aggaaaaatt atgacaactt ttaacaaaat cttaaaccca atgtactcaa ctatcgcaag
     1501 ttactcaact caagatgacg gctcactcaa tgctaagtat gttgttggca caggtgatga
     1561 taccgatggc gaggtaacaa actttgtaat catcacaagt gagtacaaat atattgatgc
     1621 tcaatcagcc aaagcgatta cagatgcacc gctaacaaaa gaggatattg gcaaaacgcc
     1681 aacgcagatt atgttaggtc gtatctataa gcacttaaaa gagacggggc agattgtagt
     1741 gtaggggtct aaatgcaaaa gcataaattt aagtttttca gaggcgatga cgtaagttat
     1801 cgcctttttt ttaggcaaac aaatggcgag cctgtaaatt tagagggtat taggctggat
     1861 ttacacgcca tagtagaggg cagcacagag cctcaaattg agctaaccgt cgattagtgg
     1921 ttgtggatga gcaatcatta aaactgcaag agttaaagca gactattaat gagcaaaccg
     1981 agcaaattaa aacactcgga acagtggtaa ataaacttat tgatgcatta caacagtcac
     2041 aaagtttaaa tgtaagatca gaatctgctg tagcagcaac cgaaaatcaa
//
LOCUS       DANLXO010000189         2022 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.194, whole genome shotgun sequence.
ACCESSION   DANLXO010000189 DANLXO010000000
VERSION     DANLXO010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.194"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..552
                     /locus_tag="PXD69_002642"
     CDS             <1..552
                     /locus_tag="PXD69_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6284772.1"
                     /translation="AGQERCIADEVPFEIPQNWTWVRLGEVGDWSSGATPNRHNPEYY
                     NGTIPWLKTGDLNNGIISSIPEFITDKALQECSVRLNPVGSVLIAMYGATIGKLGILK
                     IAATTNQACCACIPFNGIYNKFLFYYLMSQKAEFQKKSEGSGQPNISKEKIINYLFPL
                     PPIHEQHRIVQKIEQLFAEIEKL"
     gene            655..1458
                     /locus_tag="PXD69_002643"
     CDS             655..1458
                     /locus_tag="PXD69_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6284773.1"
                     /translation="MIHLFEKHLNQSNLAENTQSAYLFAVKQYHKKFDQLSKINLQRY
                     KVFLIENYKPQTVNLRLRAINYYLEFIKKEKWKLSFVKVQQKPFLENVISEADYTYFK
                     KCLKKDNELYWYFVIRFMAATGSRVSELIQIKCEHIKIGYLDLYSKGGKLRRIYIPKS
                     LQKECSEWLRLNNKHNGFIFLNKYGDRITTRGIASQLKVFARRYKLDPKIVYPHSFRH
                     RFAKSFLERFNDIAFLADLMGHESIETTRIYLRKTSTEQQEIVNKIIDW"
     gene            complement(1504..>2022)
                     /locus_tag="PXD69_002644"
     CDS             complement(1504..>2022)
                     /locus_tag="PXD69_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL6284774.1"
                     /translation="AGQERCIADEVPFEIPQNWIWVRLENYSLNHDRRRKPVSVAQRS
                     QQNKLYDYYGATGAIDKVASYIFDGKFILIGEDGGNFFTKKDVAFIVEGKFWANNHVH
                     VLSVDFNLEKYFCYYLNALNLPSMGLINGIAVPKLNQRNLNSILIAIPPISEQHRIVE
                     KIEKLFSEIEKF"
BASE COUNT          714 a          325 c          327 g          656 t
ORIGIN      
        1 gcaggtcagg aacggtgtat cgccgatgaa gtgccatttg agattcctca aaattggact
       61 tgggtgaggt tgggggaagt aggtgattgg agttcaggtg caactccaaa ccgacacaat
      121 cctgaatact ataatggtac gatcccgtgg ctaaaaacag gagacttaaa caacggaata
      181 atttcatcta tacctgaatt tattacagat aaagcattgc aggaatgttc tgtaagatta
      241 aatcctgttg gttcagtttt gatagcaatg tatggagcga caattggtaa gcttgggata
      301 ttaaaaatag cagcaacaac aaatcaggct tgctgtgcgt gtattccttt taatggaatt
      361 tataataaat tcttatttta ttatttgatg tcgcagaaag cagaatttca gaaaaaaagt
      421 gagggaagtg ggcaaccaaa tatatcaaag gaaaaaatta tcaattattt atttccttta
      481 ccaccaatcc acgaacaaca tcgcattgtt caaaaaattg aacaattatt tgcagagatt
      541 gaaaaattgt aggagtcatc atcgctttct tgggcgtgtt ggatacgccc tacagtcact
      601 aaattattga tcttttatca tatcggtttt caaccaacct aaaaggaaac ctatatgatc
      661 catctatttg aaaagcacct taatcaatct aatcttgctg aaaataccca atcagcttat
      721 ctttttgcgg taaaacaata tcacaaaaaa tttgatcagt tatctaaaat caatttacag
      781 cgatataagg tattcttaat tgaaaactat aagcctcaga ctgttaattt aaggctaaga
      841 gccataaatt attatctgga atttattaaa aaagaaaaat ggaaattatc ctttgttaaa
      901 gttcaacaaa aaccattttt ggaaaatgta attagtgaag ctgattatac ttattttaaa
      961 aaatgcctaa aaaaagataa cgaactatac tggtattttg tgattcgttt tatggcagca
     1021 acaggttcga gagtaagtga attaatccag ataaaatgtg aacatattaa aataggctat
     1081 ttagacctct attctaaagg tggaaaatta agacgaattt acatcccaaa atctctgcaa
     1141 aaagagtgtt ctgaatggtt gagattaaat aataagcata atggatttat tttcttaaat
     1201 aaatatggtg atagaattac tactcgtggc attgccagcc aattaaaagt atttgctaga
     1261 cgctataaat tagatcctaa aattgtttat ccacattcat ttcgccatcg ttttgcaaaa
     1321 agttttttag aacgatttaa tgatattgct tttcttgctg atttaatggg gcacgaaagc
     1381 atagaaacca caaggatcta tttacgaaaa acaagcacag aacagcagga aattgtgaat
     1441 aaaattattg attggtaatt tttaaggggc gtgtttcaca cgcccttgga catataagtt
     1501 tttctaaaat ttctctattt ccgaaaataa tttttcaatt ttttcaacga ttctatgttg
     1561 ttcagaaata ggtggaatag caattaaaat agagtttagg tttctttgat ttaatttggg
     1621 tacagctatt ccgttaatta atcccatact aggtaaattt aatgcattta aataataaca
     1681 aaaatatttt tccaaattaa aatcaactga taatacatga acatgattat ttgcccaaaa
     1741 tttaccttca acaataaaag caacgtcttt tttagtgaag aaattacctc catcttctcc
     1801 aattaaaata aacttaccat caaaaatata gcttgccact ttatctattg ctccagtcgc
     1861 tccataatag tcatacaatt tattttgttg gctacgctgt gcaactgata ctggttttct
     1921 tcttctatca tgatttaaag aataattttc caacctcacc caaatccaat tttgaggaat
     1981 ctcaaatggc acttcatcgg cgatacaccg ttcctgacct gc
//
LOCUS       DANLXO010000190         2014 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.195, whole genome shotgun sequence.
ACCESSION   DANLXO010000190 DANLXO010000000
VERSION     DANLXO010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.195"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            174..1472
                     /gene="tig"
                     /locus_tag="PXD69_002645"
     CDS             174..1472
                     /gene="tig"
                     /locus_tag="PXD69_002645"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDL6284775.1"
                     /translation="MSFSIETLEGLKRRVTINVPADKIEAAYKEQLKGYAKNARVDGF
                     RKGKVPHSIIEQRFGIAARQDVLSDEMQRAFFEAVIAEKINLAGRPTFTPNNYQPGQD
                     FSFTAEFEVFPEVELKGLENIEVEKPVVEIADADLDKMVDVLRKQQATWSESQEAAKA
                     ESRVTIDFVGSVDGEEFEGGKASDFVLFMGQGRMIPGFEDGIVGRKAGEQFDIDVTFP
                     EEYHAENLKGKAAKFAITLKKVEEMVLPELTEEFVKKFGNAKSVEELRAEIKKNMQRE
                     LKNAVTSRVKTQVINGLIAQNDVEVPAAAVEEEINVLRQQAVQRFGGKPEMAAQLPAE
                     LFEAEAKRRVQVGLLLSSIIGSNELKVDEKRVEEMIADIASAYEQPAEVVAHYAKNRQ
                     LTENIRNVVLEEQAVDAVLAKAKVTEKTMSFDEVMSQQAQ"
     gene            1588..>2014
                     /locus_tag="PXD69_002646"
     CDS             1588..>2014
                     /locus_tag="PXD69_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL6284776.1"
                     /translation="MEQLTFAQQLEQFFANHTLMVFAWVALLIAVIFSFYKSATQKYK
                     IVDNAQATQLINKEEAVVVDLRSDEEFRAGHIIDSIHVLPSDIKAAKINQIDKYKARP
                     VIVVDTNDFTSGGVAADLAKQGFSRVYVLKEGIGGWRAAS"
BASE COUNT          666 a          349 c          446 g          553 t
ORIGIN      
        1 cggtgaaaaa agaccgcttg taggcaagcc cattgacaag cagtcagatt ttagggattt
       61 tttacaaaac tgtttatttg cgaatgagtt tcttctcgac agtttcttga tagaacgcta
      121 caataaccgt ctatttgtat atctttttta tatccctaaa ccgaggttta agaatgtcat
      181 tttcaattga aacattagaa ggcttaaaac gccgtgttac tattaacgta ccagctgata
      241 aaatcgaagc agcatacaaa gaacaattaa aaggctatgc gaaaaatgct cgtgtagatg
      301 gcttccgtaa aggtaaagtg ccacactcaa ttatcgaaca acgttttggt attgcagccc
      361 gtcaagatgt gttatctgat gaaatgcaac gtgcattctt tgaagccgtc attgctgaaa
      421 aaatcaactt ggcaggtcgc cctactttca cgccaaacaa ctaccaacca ggtcaagact
      481 tcagctttac tgcggaattt gaagtattcc cagaagtgga attaaaaggt ttagagaata
      541 tcgaagtaga aaaaccggtt gttgaaatcg cagacgctga tttagacaaa atggtagatg
      601 tattacgcaa acaacaagcg acttggtcag aaagccaaga ggctgcaaaa gccgaatctc
      661 gtgtaactat tgatttcgtt ggttcagtag atggtgaaga attcgaaggc ggtaaagcat
      721 cagacttcgt gttatttatg gggcaaggtc gtatgatccc ggggtttgaa gacggaatcg
      781 taggtcgtaa agcgggtgag caattcgaca ttgatgtgac tttcccagaa gaataccacg
      841 ctgaaaactt aaaaggcaaa gcagcgaaat ttgcaattac cttgaaaaaa gtagaagaga
      901 tggtattacc ggaattaacc gaagagtttg tgaaaaaatt cggtaatgca aaatcagtgg
      961 aagaattacg cgcagaaatt aagaaaaata tgcaacgtga acttaaaaat gcagtcactt
     1021 cacgtgtgaa aactcaagta atcaacggct taattgctca aaatgatgtt gaagtgccgg
     1081 ctgctgcggt tgaagaagaa atcaacgtat tacgccaaca agcggtgcaa cgttttggtg
     1141 gtaagcctga aatggcagct caattaccgg ctgaattatt tgaagcagaa gctaaacgcc
     1201 gtgttcaagt gggcttatta ttatcttcaa tcatcggttc taacgaatta aaagtagatg
     1261 aaaaacgtgt tgaagagatg atcgcagata tcgcttcagc ttacgaacaa ccggctgaag
     1321 tggttgctca ctatgcgaaa aaccgtcaat taactgaaaa tatccgcaat gtggtattag
     1381 aagagcaagc ggttgatgca gtgctagcga aagcgaaagt gactgaaaaa acaatgtcat
     1441 ttgacgaagt aatgtcacaa caagctcaat aatttcctta taaggtgggc ttttgctcac
     1501 cttttattac ttttacaagc ggttaaattt agtgataaat ttgcatcaaa acgaccgctt
     1561 attttttgat gttaaggaaa ttgaattatg gaacaactaa cttttgctca acaattagag
     1621 caattttttg ccaatcatac cttgatggtg tttgcttggg ttgcattatt gattgcggta
     1681 atttttagct tttataaaag tgcaacgcaa aaatataaaa ttgtcgataa cgcacaggct
     1741 acacagctga ttaataaaga agaggcagta gtggttgatt tacgttctga tgaagagttc
     1801 cgtgccggtc atattattga tagcattcac gtgttaccgt cagacattaa agcagctaaa
     1861 atcaatcaga ttgataaata caaagctcgc ccggtaattg tagtagacac taatgacttc
     1921 acttcaggtg gtgttgcggc agatcttgct aaacaaggct ttagcagagt ttatgtatta
     1981 aaagaaggga ttggcggctg gcgtgcagca agcc
//
LOCUS       DANLXO010000191         1977 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.196, whole genome shotgun sequence.
ACCESSION   DANLXO010000191 DANLXO010000000
VERSION     DANLXO010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.196"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..902
                     /locus_tag="PXD69_002647"
     CDS             <1..902
                     /locus_tag="PXD69_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HDL6284777.1"
                     /translation="QSTTMMSRRVYELLASGTPVVSTPSKAITAQFPGIVITVNNEKE
                     AELAVHKLLTDSYYWHKQSMLGIREVMSKHTYENRWEFACSVINNEPIKEKTPSVRII
                     AVYHNYLDLAIYIDSLIHQNNVDIKEVVLLISSSLVLDKELLDGYSDKVKVVTLSEFN
                     LKNYLDDEVSYTYFTDDNVLNYRNSIYGLVATLNYCNTEAVTRRLYYKLSSLNKIMDF
                     SITQEDWYRSVTETQRNCVLIKNSAIEDYSINLTANKIQAKNSPIFIADPFNVLYIDD
                     KKLLKGRDSLLKLVYKTSPYLGV"
     gene            904..1971
                     /locus_tag="PXD69_002648"
     CDS             904..1971
                     /locus_tag="PXD69_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284778.1"
                     /translation="MKFILFDSILERHLGESLKRALESLGHQAVFTDLILHGHSMIYK
                     QADIDFMWKKVKDICDEKADMFISFRPMNLTTEMLEYIGKRMKTAIWLSDDPVLYKTC
                     YSQVVNHYDVLLHCGYKEVMDFYEANNHPKGFNFPFWTDHVAFPSVYNPLHSDYEIAF
                     LGNMNGQVRRKRYMELASLPFTKKVFGLIDSDPLAMHGGFINEAYLHTKRVTEVLSKA
                     KVGVSIPQFFTEYNGLDYDYPELAGLGYFQFPSRVIQYAASGLPIAAVGDERMKEVYP
                     EIFVGNSITELEPYIKQICEDYDFALSESAKILTRFRKNYSALSRAMMLIDLVENLDK
                     LQSQTTQERAILFTKYKAQYN"
BASE COUNT          671 a          288 c          360 g          658 t
ORIGIN      
        1 ctcaatcaac cacaatgatg tcaagacgtg tgtatgaact tctagctagc ggcacacctg
       61 ttgtatctac gccatctaaa gctattacgg cacaattccc tggcattgtt attactgtaa
      121 ataatgagaa agaagctgag cttgctgtcc ataaattact gacagatagc tattattggc
      181 ataagcagtc catgctgggc atacgtgaag taatgtcaaa acatacttat gaaaatcgtt
      241 gggaatttgc gtgtagtgta atcaataatg aaccaataaa ggaaaaaaca cctagtgttc
      301 gaattatcgc ggtttatcat aattatctag atttagctat ctatatagat tctctaattc
      361 atcaaaataa tgttgatatt aaagaggttg tattacttat ttcatcttca cttgttttag
      421 ataaagaatt attagatggt tattccgata aagtgaaagt agttactctt tctgagttta
      481 atctgaaaaa ctatttagat gatgaagttt cttacactta tttcaccgat gataatgtcc
      541 taaattatcg taattctatt tatggattgg tagcaacact taattattgt aatacagaag
      601 cagtaaccag aagattgtac tataaattat catcattgaa taaaataatg gacttttcaa
      661 ttactcagga agactggtac agaagtgtta cagaaactca acgtaattgt gttttaatta
      721 aaaatagtgc tattgaagat tattcaatca atcttacggc caataaaatt caggctaaaa
      781 attcacctat ctttatagct gatccattta atgtgctata tatagatgat aaaaagttat
      841 tgaaaggtag agattcctta cttaaattgg tttataagac ttctccatat ttaggggttt
      901 aatatgaagt ttattttatt tgattctatt ttagaacgtc atttgggcga aagtttaaaa
      961 agagctttgg agtcgttagg gcatcaagca gtatttacag atttaatttt gcacggccat
     1021 tctatgattt ataaacaagc ggacatagat ttcatgtgga aaaaagtaaa agatatttgt
     1081 gatgaaaaag cagatatgtt tatctcattt cggccgatga atctaacgac agaaatgctt
     1141 gagtatatag gcaagcgaat gaagaccgct atttggcttt cagatgaccc tgttttatat
     1201 aaaacttgct attctcaagt agtaaatcat tatgatgtat tattacattg cggatataaa
     1261 gaagttatgg atttttatga agctaataac catccaaaag gctttaattt tccgttttgg
     1321 acagatcatg tagcatttcc aagtgtatat aacccgcttc attctgatta tgagattgca
     1381 tttttaggta atatgaatgg gcaagttaga cgcaaaagat acatggaatt ggcttcatta
     1441 ccatttacca aaaaagtatt cggtttaata gattcagatc cattagcaat gcatggtgga
     1501 tttatcaatg aagcatattt acatacaaaa cgtgtaacag aggttttatc taaggcaaaa
     1561 gttggggtga gtatcccaca attctttacc gaatataatg gtttagatta tgattatcct
     1621 gaattggcgg gtttaggata tttccaattt cctagtcgag ttatccaata tgctgcaagt
     1681 gggttaccta ttgcagcggt tggtgatgag agaatgaagg aagtttatcc tgaaatcttt
     1741 gttggcaata gtattacaga gctggagccg tacattaaac aaatttgtga agattatgat
     1801 tttgcactat cagaatcggc taaaattcta actagattta gaaagaacta ttctgcctta
     1861 tcccgtgcca tgatgttgat tgatttggta gaaaatttag acaaactaca gagccagaca
     1921 acacaagagc gcgcaatttt atttactaaa tataaagctc aatacaacta ggagtaa
//
LOCUS       DANLXO010000192         1937 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.197, whole genome shotgun sequence.
ACCESSION   DANLXO010000192 DANLXO010000000
VERSION     DANLXO010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.197"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..490)
                     /locus_tag="PXD69_002649"
     CDS             complement(<1..490)
                     /locus_tag="PXD69_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6284779.1"
                     /translation="MPNFSFTHLYKKHTKELPTVTLLSALIGLSQVSYANPLPLGNTT
                     GTNNLAVGEGSFALGTGSQAIGKNAIATGGNISPQEFNVELENFRDLVNQIEELRTQI
                     AEQEKQGSVNQQLQDALKSQIAQYDTILERVREKQAQQAILANSVISMRKELVNRRNQ
                     LTE"
     gene            complement(684..1913)
                     /locus_tag="PXD69_002650"
     CDS             complement(684..1913)
                     /locus_tag="PXD69_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDL6284780.1"
                     /translation="MQFREINPSPRLLMCPGPTDADPRVLRAMSAPILGQFDPEFTSL
                     MNETMEMERRLFQTKNEQTYVVNSTSRGGLETVLTAAICPGDKVLIPAFGRFGYLLNE
                     ILARSGADITIIEREWGTVFEPEEIEAELKKGGYKAVAIIHGETSTSMMQPLEEIGKI
                     CKQYDAMLIVDTVATLGGVDIRVDEWGIDACIGGTQKCISAPSGTALITYNKRIEEII
                     AKRKRVEKGIRAESDVDGTLPPIPSNYLDLAQLQDYWSPRRLNHHTETTSAQYGVHEA
                     LRIILQEGLEARFARHILNDKALCAGLEAMGLKIFGDRKHKAPVVTAFHIPEGMSGPA
                     LRSDILNHFGIELATSFGPLDGKVIRIGNMGFSSQKRNVLLTLGALEAVLLSHKVKVP
                     SGDAVAAALAVYKEADK"
BASE COUNT          544 a          376 c          384 g          633 t
ORIGIN      
        1 attctgttaa ctgatttctt ctattaacta attctttccg cattgatata acactattgg
       61 ctaatattgc ttgttgtgct tgtttttcac gtacacgctc taaaatagtg tcatattgag
      121 caatctgact ctttaaagca tcttgtaatt gttgattaac agagccttgt ttttcttgtt
      181 cagcaatttg agtacgtaac tcttcaattt gattaactaa atcacggaag ttttctaact
      241 ccacattgaa ttcctggggg gagatattac caccggttgc aatggcattc ttgccgattg
      301 cttgagaacc tgtgcctaac gcaaaactac cttcacctac agcaaggtta ttggtgccag
      361 tggtgttgcc taaaggaagt ggattggcat aagagacttg gctaagccct atcagagcgc
      421 taagcaaggt aacagtaggg agctcttttg tgtgtttttt atacagatgg gtgaaactaa
      481 agtttggcat atcaaaattt cctcattaaa acttttactt ttcattctta aaaaaatgct
      541 ccgtgtcata atatttaatt tgattaaatg aaataggaaa agattaaatt tgtgaaaata
      601 ttttgagttt ctgtggtttt actgtggata aatatccaca gtattaatta ttagtgagtt
      661 gtattgtaaa tttaggaagg tggttattta tcagcctctt tatagactgc caaggcagct
      721 gcaaccgcat cgcctgaagg cacttttact ttatggctta aaagtacggc ttctaacgca
      781 cctaaggtta aaagtacgtt acgtttttgg cttgagaaac ccatattacc gatacggatt
      841 acttttccat ctaaggggcc gaatgaggtg gctaattcaa taccgaagtg gtttaaaata
      901 tcactacgca atgctgggcc actcatacct tctggaatgt ggaatgccgt tacaacgggg
      961 gctttatgtt tgcgatcgcc aaaaattttc aaacccattg cttctaaacc tgcacataat
     1021 gctttgtcgt ttaaaatatg gcgagcaaaa cgagcttcta agccttcttg taaaataatg
     1081 cgtaacgctt cgtgtacacc atattgtgca gaagtggttt ctgtgtggtg atttaaacgg
     1141 cgtgggctcc agtaatcttg tagctgtgcc aagtctaagt agttacttgg aattggcggt
     1201 aatgtgccat ctacatcaga ctctgcacga atgccttttt ccacacgttt acgttttgca
     1261 ataatctctt caatccgttt gttataagtg attaaagctg tgcctgatgg ggcggaaata
     1321 catttttgtg taccgccgat acaagcatca atgccccatt catccacacg aatatctaca
     1381 ccgcctaagg ttgcaacggt atctacaatt aacattgcat catattgttt acagattttg
     1441 ccgatctctt ctaacggttg catcatagag gttgaggttt cgccgtgaat aatagcaact
     1501 gctttatagc cgcctttttt caactctgct tcaatttctt ctggttcaaa tacggttccc
     1561 cactctcttt cgataatggt aatatctgca ccgctacgag ctaaaatttc atttaataaa
     1621 taaccaaaac gaccaaatgc aggaattaac actttatcgc ctgggcaaat cgctgcggtt
     1681 agaacagttt ctaagccacc acgagaggtg gagttgacta cataagtttg ctcatttttg
     1741 gtttggaata aacggcgttc catttccatt gtttcattca ttaatgaggt aaactcaggg
     1801 tcaaattgcc ctaaaatggg tgcagacatt gcacgcaaaa cacgtgggtc agcatctgtt
     1861 gggccagggc acattaataa acgaggggag ggattaattt ctctgaattg cataattatt
     1921 tcctataatt gaatgaa
//
LOCUS       DANLXO010000193         1937 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.198, whole genome shotgun sequence.
ACCESSION   DANLXO010000193 DANLXO010000000
VERSION     DANLXO010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.198"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..654
                     /locus_tag="PXD69_002651"
     CDS             <1..654
                     /locus_tag="PXD69_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL6284781.1"
                     /translation="GNKNRFIPCENQAEDKANYFEISDLDYIKAEAQGELVAVVHSHP
                     EPNGKPVLSTLDRKMQVQTGLDWWLVHNQKIHKFRNVPHLIGREFKHGTMDCYTLYRD
                     AYMLAGYEMDEFERQDDWWHTGQNLYLDNIQGQGFERVETPQIGDVILMQVGADVPNH
                     AAIYIGDQMVVHHSPNRLSKRDLYDGYWLRHTHSIWRHKLAEKLDFDGILNDIAVNN"
     gene            923..1552
                     /locus_tag="PXD69_002652"
     CDS             923..1552
                     /locus_tag="PXD69_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL6284782.1"
                     /translation="MITVKFYGHLKTFGTDFKILVKDIAEAIRALCSQLKGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVVKGAKSGGIFQAVLGVALIGAA
                     FALGPIGLGLVGSATAMTVGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            1562..>1937
                     /locus_tag="PXD69_002653"
     CDS             1562..>1937
                     /locus_tag="PXD69_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284783.1"
                     /translation="MRIYGAKGGGGSSHTPIEAPETGRSKQIVNIVELLCEGEIEGLV
                     DGFKSIYLDGTQIQNDDGTYNFNNVSGQLNVGTQDQEVLEGYDSSQNEVSVGVEVKKK
                     NGAIVRTVTDERISRLRLTLGVR"
BASE COUNT          593 a          381 c          464 g          499 t
ORIGIN      
        1 ggcaataaaa atcgatttat cccttgcgaa aaccaagcgg aagacaaagc caattacttt
       61 gaaatctctg atcttgatta catcaaagca gaagcacaag gcgagctggt ggcggtagtt
      121 cattcacacc ctgagccaaa cggcaagccg gtactctcta cccttgatcg caaaatgcaa
      181 gtacagaccg gtttagattg gtggctggta cataatcaaa aaatccataa attcaggaat
      241 gtgccgcatt taatcgggcg tgagtttaaa cacggtacaa tggattgtta cacgctctac
      301 cgtgatgcct atatgcttgc cggttacgag atggacgagt tcgagcgaca agatgactgg
      361 tggcataccg ggcaaaatct ctatttggat aatattcaag ggcaaggctt tgagcgagtg
      421 gaaaccccac aaatcggcga tgtgatttta atgcaagtag gtgctgatgt gccgaaccac
      481 gctgccattt acattggcga tcagatggta gtccatcata gccccaaccg attatctaag
      541 cgtgatttat acgacggcta ctggttacgc catacccaca gtatttggcg gcataaactg
      601 gcggagaagt tagattttga tggcatattg aatgatattg ctgtaaataa ctaacaaaaa
      661 atgaccgctt gtaacaaaaa caaaccccga agcgtttgca gcacttcggg gtttttcata
      721 tccacttacc taactaagag gacataaatt aaatgaatga taaacgattt acattcaaat
      781 ttctaggagt tcttatggaa gcaataaata ttaccccaaa agaaatcaga aaaacaatgt
      841 ggacagccgc aataattctc tttttgtttg cgttcatctg gaaagcccct gaatttatca
      901 ctgctattcg ttggtggtaa ctatgattac agttaaattt tacggacacc ttaaaacatt
      961 cggcacagat tttaaaattt tagttaaaga catcgctgag gcaattcgtg ctctgtgttc
     1021 acagcttaaa ggattgcgtg aagcgttgcg agacggtgtt tataaagtcc gtatcggtaa
     1081 gcagtattta gacccatcag cccttgaaaa agggcttttt tattgcctga agaaagggca
     1141 aaccattcat tttacccctg ttgtcaaagg agcgaaaagc ggtggtattt ttcaagcggt
     1201 gttaggtgtg gcgttaattg gggctgcatt tgcgttaggt cctatcggct taggattggt
     1261 tggctctgct acagcaatga cagttggagc aatgggggca tcaatgttac taggaggagt
     1321 ttcccaaatg ctcaccaaaa tgccaaaagc ccccacaatg ggtaatgaaa cagaaaaaga
     1381 aagctcaacg gctttttcaa atttaaataa cttggtggct caaggcaaac ctgtgccgtt
     1441 ggcttatggt ttgattcgta ccggctcgct ggtgatatcg cagggagttg agacgatcac
     1501 cattaaagaa aaccaaccgg caagcaacaa gaaaaccggc tttagaaaat aagggataat
     1561 tatgcgtatt tacggagcaa aaggtggtgg cggcagtagc cataccccga ttgaagcacc
     1621 ggaaaccggt cgctcaaaac agattgtgaa tattgtggaa ttgctgtgcg agggcgaaat
     1681 tgaaggcttg gttgatggct ttaaatcgat ttacctagac ggcacgcaga tccaaaacga
     1741 tgacggcacc tataatttta ataatgtgag cggtcagcta aatgtcggta cgcaagatca
     1801 agaggtatta gaaggttacg acagctcaca aaatgaagtg agtgtgggtg tagaagtcaa
     1861 gaaaaaaaac ggtgcaatcg tccgcaccgt tactgatgaa cgcatcagcc gtttgcgttt
     1921 aacgttgggc gtgcggt
//
LOCUS       DANLXO010000194         1792 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.199, whole genome shotgun sequence.
ACCESSION   DANLXO010000194 DANLXO010000000
VERSION     DANLXO010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.199"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..908
                     /locus_tag="PXD69_002654"
     CDS             <1..908
                     /locus_tag="PXD69_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL6284784.1"
                     /translation="NYIGGKFKLLEQLQPLFNEKEVFLDLFAGGGNVGINSSSSKVIF
                     NDTNENLIDLIEFIKDTDTDALLKQIDNIIEAYNLSNTSLYGYSYYDCDSSRGLAEYN
                     KGRFLKLRDDFNAKVLAGEIDYPMLYVLMVFSFNNQIRFNRKGLFNLPVGKRDFNSKM
                     RSKLVLFSEELKSKDVQFMKKDYREISLDDFSQETFIYCDPPYLITNATYNEHGMWTE
                     IEEKALLEFLDEANEKGFSFALSNVLESKNKRNDILYNWIESKGYYCNYLNKSYSNSN
                     YHRKDKVSISEEVLITNYPVNWRNK"
     gene            909..>1792
                     /locus_tag="PXD69_002655"
     CDS             909..>1792
                     /locus_tag="PXD69_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL6284785.1"
                     /translation="MSNKSIPYQSFCWVIGTTSFRTAKLNLKIEAQLLLLDEFFNEVI
                     KESSWNWNNELQEKYYDFMKDRAFLTGEAKRKDKDAREKTSGLVDIGLITEDRLITDA
                     GRELLKVTSSGDFETNNVFNINRDSFIYLKQLLKTSIDVSGSIVRPFIAVVKCLTELE
                     FLSYDEFTYFVPLIRDDESAKQIISDIKLYREGKILPEEIIYKRLMQMENYKLAQEEF
                     IASDVDENLICLVGMNRKSRNYDKPYYKLYENLKKVFLDGENIYESLLNSAKNINQKP
                     GILWRSLLFKTTNIGVVR"
BASE COUNT          683 a          183 c          336 g          590 t
ORIGIN      
        1 ttaattatat tggcggaaaa tttaaactat tggaacaatt acaaccttta tttaatgaaa
       61 aggaagtatt tttagattta tttgctggtg gagggaatgt tgggataaat tcctcttctt
      121 caaaagttat ttttaatgat acgaatgaaa atttgataga tttaattgaa tttataaaag
      181 acactgatac tgatgcttta ttaaaacaaa tagacaatat tattgaggcg tataatttat
      241 ccaatacatc attatatggg tattcttatt atgattgtga tagtagtaga ggcttagccg
      301 aatacaataa aggaagattt ctcaagttaa gagatgattt taacgctaaa gttcttgctg
      361 gagaaataga ttatccaatg ctttatgtac ttatggtgtt ctcttttaat aatcagatta
      421 ggtttaatag aaagggactt tttaatcttc cggtaggtaa gagagatttt aattccaaaa
      481 tgagaagtaa acttgtatta ttttctgaag aattaaaaag taaagatgtc cagtttatga
      541 aaaaggatta tagagaaatt tcgttagatg atttttctca ggagactttt atttattgtg
      601 atccacctta tttgattaca aatgcaacat ataatgaaca tggaatgtgg actgaaatag
      661 aagaaaaagc tttacttgaa tttttggacg aagccaatga aaaaggtttt agttttgctt
      721 tgtctaatgt tttggaaagt aaaaataaaa gaaatgatat tttatataat tggattgaaa
      781 gcaaaggata ttattgcaat tacttaaata aaagttattc aaatagtaac tatcatagaa
      841 aagataaagt cagtatatct gaagaagttt taattactaa ctatcctgtg aattggagga
      901 ataagtaaat gtctaataaa agtattccat atcaaagttt ttgttgggtt ataggaacta
      961 caagttttag aactgcaaaa ctaaatttaa aaatcgaggc acagttgttg cttcttgatg
     1021 agttttttaa tgaggtcata aaggaatcaa gttggaactg gaacaatgaa ttgcaagaaa
     1081 aatattatga ttttatgaaa gatagagctt tcctaacagg agaagcaaaa agaaaagaca
     1141 aagatgccag agaaaaaaca tcaggattgg ttgatattgg tttaattaca gaagatagat
     1201 tgattacgga tgcaggaaga gaactcctta aagtaacaag tagtggggat tttgaaacca
     1261 ataatgtgtt taatattaat agagatagct ttatctatct aaaacagctt cttaaaacga
     1321 gtatagatgt aagtggtagt atcgttagac cgtttattgc ggttgtaaag tgcctgacgg
     1381 aacttgagtt tttaagttat gacgagttta cttattttgt tccgctaatt agagatgacg
     1441 aaagtgcaaa acaaatcata tcggatatta aattatatcg agaaggtaaa attttaccgg
     1501 aagaaataat ttataagagg cttatgcaaa tggaaaacta caaacttgca caagaagaat
     1561 ttatagcctc tgatgttgat gaaaatctaa tatgtttagt gggaatgaat cgtaaaagca
     1621 gaaactatga caagccgtac tataaattgt atgagaattt aaagaaggta tttcttgatg
     1681 gcgaaaacat ttatgaatcg ctattaaatt ctgcaaagaa tataaatcaa aaacctggaa
     1741 tattgtggag aagtttactc tttaaaacaa ccaatattgg tgttgtaaga aa
//
LOCUS       DANLXO010000195         1758 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.200, whole genome shotgun sequence.
ACCESSION   DANLXO010000195 DANLXO010000000
VERSION     DANLXO010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.200"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            2..343
                     /locus_tag="PXD69_002656"
     CDS             2..343
                     /locus_tag="PXD69_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005711074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDL6284786.1"
                     /translation="MCIGLGIIGAVLPGLPTTPFLLLALFCFTKGSERIRQWFIQTKL
                     YKKYLQEYDEKRAMTMKQKITILAISFPFTLFAFFALPHIGGKIALVVLVIIQYWYFF
                     CKMKTLEPENA"
     gene            complement(340..1251)
                     /gene="xerC"
                     /locus_tag="PXD69_002657"
     CDS             complement(340..1251)
                     /gene="xerC"
                     /locus_tag="PXD69_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDL6284787.1"
                     /translation="MTTSNPLFQQTRPYWDFLRIEKQVSPHTLSNYQRQLMAVSELFS
                     QAGIENWEEVESSSVRWMLSQSHKQGLSAKSIGLRLVALRQWFVYLIKIGRMSANPTL
                     GVKSPKVGKHLPKNIDAEQVGQLLAIESDEPSDIRDIAMMELMYSSGLRLSELQGLDL
                     GDMDLSAREVRVQGKGSKERIVPIGSQALKALNRWLEMRLQFKPQDNAVFLNKRGGRL
                     SHRSIQLAMKKWGERQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSSLSTTQ
                     IYTHLDFQHLAKIYDSAHPRARRKQED"
     gene            complement(1318..1608)
                     /locus_tag="PXD69_002658"
     CDS             complement(1318..1608)
                     /locus_tag="PXD69_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5377 domain-containing protein"
                     /protein_id="HDL6284788.1"
                     /translation="MSVKTEVLFSNHWNVRVSDPGFEGSPSHYFETVYLTLEAFINGE
                     NVHYEFTRKVEQEVKTHRSFTDVNELFEFLGEYLSPVALGNVGVRIGQLGLA"
BASE COUNT          486 a          423 c          328 g          521 t
ORIGIN      
        1 tatttgtatt ggtttaggca tcatcggggc agtattaccg ggcttgccga ccacaccgtt
       61 cttacttttg gctctgttct gctttactaa aggctcggag agaatccgcc agtggtttat
      121 tcaaaccaaa ttatacaaaa aatatctgca agaatatgat gagaaacggg caatgacgat
      181 gaagcaaaaa atcacgattt tagcgatttc gtttccgttt acactatttg ctttctttgc
      241 actgccccat atcggtggga aaattgcgtt agtagtgtta gtgataattc aatattggta
      301 tttcttctgc aaaatgaaaa cccttgaacc ggagaatgcc taatcttcct gcttccgcct
      361 tgctcttggg tgggcagagt cataaatttt agctaagtgt tggaaatcca gatgcgtata
      421 aatttgagtg gtggacaggc tactatgacc caataattcc tgaaccgctc gcaaatcacc
      481 gcttgcctct aacatatgag tcgcaaaaga gtgacgtaat ttatgtggat gcagatggct
      541 ttccagccct tgtcgctcac cccatttctt cattgccaac tgaatggaac gatgagataa
      601 ccgcccacct cgcttattca gaaacaccgc attatcttgc ggcttaaatt gcaaacgcat
      661 ttctaaccag cgatttaacg cttttaacgc ttgcgagcca atcggcacaa ttcgctcttt
      721 gctaccctta ccttgcaccc gtacttctcg tgccgataaa tccatatcgc ctaaatccag
      781 cccttgtaat tccgataaac gcaagccgga actatacatc agctccatca tcgcaatatc
      841 tcgaatatcg ctcggctcat cactctcaat cgccagcaac tgcccgacct gctccgcatc
      901 aatatttttc ggcaaatgct tacctacttt cggcgatttc acccctaaag tcgggtttgc
      961 cgacattcgc ccgattttaa tcaaatagac aaaccattgc cgtaacgcca ccaagcgtaa
     1021 gccgatactt ttcgcactca acccttgctt atggctttgg cttaacatcc aacgcaccga
     1081 gctactttcg acctcttccc aattttcaat gcctgcttgc gaaaaaagct cgctcaccgc
     1141 cattaattgg cgttgataat tgcttaaggt atgcgggcta acttgctttt caatgcgtaa
     1201 gaaatcccaa taggggcggg tttgttggaa aagagggttg gaagtggtca taaacgtaat
     1261 aacaagcggt taatttttag gaaaatgttg caagggcaaa agatttgccc tttgagatta
     1321 ggctagcccc aactgaccga tacgcacgcc aacattacca agtgcaacag ggcttaaata
     1381 ttcgccgaga aattcaaaca attcattcac atcagtaaaa ctgcgatgag ttttcacttc
     1441 ttgctccact ttacgagtaa attcataatg tacattttcg ccgttaataa aggcttccag
     1501 cgttaaatat acggtttcaa aatagtggct tggcgagcct tcaaagcccg gatcactcac
     1561 tcgaacattc caatgattac taaataaaac ttcggttttt actgacattg tgttttcctt
     1621 cttcctataa gtacgtacat tattttaatc aagatagatt gaatttgcca cttttcctag
     1681 tcagaatcga ggcaaatctt atttggtttg tcctcttata tctttccctc aaaatatgat
     1741 cttggtcaaa aaatactg
//
LOCUS       DANLXO010000196         1753 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.201, whole genome shotgun sequence.
ACCESSION   DANLXO010000196 DANLXO010000000
VERSION     DANLXO010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.201"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..770
                     /locus_tag="PXD69_002659"
     CDS             <1..770
                     /locus_tag="PXD69_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284789.1"
                     /translation="AVINDLNFSSCLYIKPNTSKLYVILNGALIKEPRNPLIYHRHSW
                     HLEFDGSVLYIADPTLFKYESINLAWYVGDKDTDLYPYLAEFVTSVATHLNVETDHIV
                     TYGSSGGGFAALQLGARIGNGVVTVCINPQTNIMKYVPSYRNAFLNACFDFNAEEYDS
                     LSNQEKFNALVLLKENTSKILYIQNTQDEFHHKWHFLPFLELKGIDLSEIEKTHWREQ
                     QSKDVKVILYSHESGHAAEPKEMIPEILSAVDQLIAS"
     gene            772..>1753
                     /locus_tag="PXD69_002660"
     CDS             772..>1753
                     /locus_tag="PXD69_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6284790.1"
                     /translation="MLFYLVSDSLTRLSLSNESLVDLGRITSIGNYPFLHNAKNAKFL
                     MVESAWQGYKNRWKYKIASYPDNPERTNEKLVRLVEKAKDKGIPTVFWNKEDSVHFDR
                     FIDSAKHFDHIFTVDQNAIARYREVVPATTTVNVGMFPVQPKIHNFQGFNFKHLAANF
                     VGSYSHHIHNKRRERQDMLFGAALKAGLPVTIFDRNSDRKSENYRYPKNSFNLNVQPN
                     VSYTETANIYRDYLVSLNINTVEDSPTMFSRRVVEILACGGILVSTPSMAIDNIFKEY
                     CHIVQSEDEAIELFQRLKRGASRDDLNKAIAGSEFVLSNFTWEHFLSQIQK"
BASE COUNT          579 a          283 c          319 g          572 t
ORIGIN      
        1 aagctgtaat taatgatctt aatttttcat cgtgtctata tatcaaacct aatacatcaa
       61 aattatatgt gatattaaat ggtgcattaa tcaaagaacc cagaaatccc ttaatttatc
      121 atagacatag ttggcatcta gaatttgatg gctcagttct atatatcgca gatccaacat
      181 tatttaaata tgaatcaatt aatttggctt ggtatgttgg agataaagat actgatttat
      241 atccatactt agctgaattt gtaacttctg ttgctacaca tttgaatgtt gagacagacc
      301 atattgttac ttatggttca agtggtggtg gatttgctgc attacagttg ggagcaagaa
      361 ttggaaacgg tgtagttacc gtttgtatta atccacaaac caacatcatg aaatatgtac
      421 caagttatcg taatgccttt ttaaacgctt gctttgactt taatgcggaa gagtacgata
      481 gtctttctaa tcaagagaaa tttaatgctt tagtattact taaggaaaat acatcaaaga
      541 ttttgtatat tcaaaatact caggatgaat ttcatcataa atggcatttc ctcccattcc
      601 tagagttaaa ggggatagat ctatcggaaa tagaaaagac ccattggaga gaacaacaga
      661 gcaaagatgt aaaagttatt ttgtattctc atgaatcagg tcatgcagct gaacctaagg
      721 aaatgattcc cgagatatta tccgctgttg atcaactgat agctagctaa aatgctgttt
      781 tatttggtat ctgattcttt aactaggctt tcattatcaa atgaaagcct agttgatctt
      841 ggaagaataa catctatagg aaattatcct ttcttgcata atgcaaagaa tgctaaattt
      901 cttatggtcg aatccgcctg gcaaggctac aaaaaccgtt ggaaatataa aattgcctct
      961 tatcctgata atcctgaacg aaccaatgaa aagttggttc gtttagtaga aaaagcgaag
     1021 gataaaggca ttccaacggt cttttggaac aaagaagatt ctgtgcattt tgatcgattt
     1081 attgattcgg cgaagcattt tgatcatatt tttaccgtag atcaaaatgc cattgctcgt
     1141 tatagggaag tagtgcctgc gacaacaacc gtcaatgtcg gaatgttccc tgttcagccc
     1201 aaaatccata actttcaagg atttaatttt aaacaccttg ccgcaaattt tgtagggagt
     1261 tacagtcatc atatccacaa taagcgtaga gaaagacagg atatgttgtt tggtgcagca
     1321 cttaaagcag gtcttccggt aaccatcttt gatagaaact ctgatagaaa atcggaaaat
     1381 tatcgttacc caaaaaatag ctttaattta aatgttcaac ctaatgttag ttatactgaa
     1441 actgctaata tttatcgtga ttatcttgtt tctttgaata ttaatactgt cgaagattcc
     1501 cctacgatgt tttctcgcag agtcgttgaa atattagctt gtggaggaat attagtctct
     1561 acaccaagta tggctatcga caatatattt aaagaatatt gtcatatcgt acaaagtgaa
     1621 gatgaggcta tagaattatt ccaacgttta aaacgaggtg cttctcgtga tgatttgaat
     1681 aaagcgattg caggctctga atttgtattg agtaacttta cttgggaaca tttcttatcc
     1741 caaatacaga aag
//
LOCUS       DANLXO010000197         1739 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.202, whole genome shotgun sequence.
ACCESSION   DANLXO010000197 DANLXO010000000
VERSION     DANLXO010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.202"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(25..1564)
                     /locus_tag="PXD69_002661"
     rRNA            complement(25..1564)
                     /locus_tag="PXD69_002661"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          408 a          523 c          347 g          461 t
ORIGIN      
        1 acttgctgtc gttctcgatt ttggtaagga ggtgatccaa ccgcaggttc ccctacggtt
       61 accttgttac gacttcaccc cagtcatgaa tcataccgtg gtaaacgccc ccctttcggt
      121 taagctatct acttctggta caacccactc ccatggtgtg acgggcggtg tgtacaaggc
      181 ccgggaacgt attcaccgca acattctgat ttgcgattac tagcgattcc gacttcatgg
      241 agtcgagttg cagactccaa tccggactta gacgtacttt ctgagattcg ctccccatcg
      301 ctggctcgcc gccctctgta tacgccattg tagcacgtgt gtagccctac tcgtaagggc
      361 catgatgact tgacgtcatc cccaccttcc tccggtttat caccggcagt ctcctttgag
      421 ttcccgacct aatcgctggc aacaaaggat aagggttgcg ctcgttgcgg gacttaaccc
      481 aacatttcac aacacgagct gacgacagcc atgcagcacc tgtctcatgg ttcccgaagg
      541 cactctcata tctctacaag attccatgga tgtcaagagt aggtaaggtt cttcgcgttg
      601 catcgaatta aaccacatgc tccaccgctt gtgcgggccc ccgtcaattc atttgagttt
      661 taaccttgcg gccgtactcc ccaggcggtc gatttatcac gttagctacg ggcaccagag
      721 ttaaacccca atccccaaat cgacagcgtt tacggcgtgg actaccaggg tatctaatcc
      781 tgtttgctcc ccacgctttc gcacatgagc gtcagtacat tcccaagggg ctgccttcgc
      841 cttcggtatt cctccacatc tctacgcatt tcaccgctac acgtggaatt ctacccctcc
      901 ctaaagtact ctagttgtcc agtctgaaat gcaattccca ggttaagccc ggggctttca
      961 cacctcactt aaacaaccgc ctgcgtgccc tttacgccca gttattccga ttaacgctcg
     1021 caccccccgt attaccgcgg ctgctggcac ggagttagcc ggtgcttctt ctgtgattaa
     1081 cgtcaatcga ctgttctatt aaaacaatcg ccttcctcgt caccgaaaga actttacaac
     1141 ccgaaggcct tcttcattca cgcggcatgg ctgcatcagg gttcccccca ttgtgcaata
     1201 ttccccactg ctgcctcccg taggagtctg gaccgtgtct cagttccagt gtggctggtc
     1261 atcctctcag accagctaga gatcgcgggc ttggtgagcc tttacctcac caactaccta
     1321 atcccacttg ggctcatctt atggcaggtg gccaaatggt cccacccttt agtcctaaga
     1381 cattacgcgg tattagctac cgtttccagt agttatcccc ctccataagc cagattccca
     1441 agcattactc acccgtccgc cactcgtcac ccaaggagca aactcctatg tgctaccgtt
     1501 cgacttgcat gtgttaagcc tgccgccagc gttcaatctg agccatgatc aaactcttca
     1561 attcaaaaag tttaatcgct caatactgct gacataaaat cgcacttcca aatttaaacc
     1621 taattaaaat taagttaaaa gaaagtaatg aatttctagt tagcacctat taagacttca
     1681 aaattaaaaa aatgtttttc aatcaagtca atcaacaagt gcccacacag attgtctga
//
LOCUS       DANLXO010000198         1715 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.203, whole genome shotgun sequence.
ACCESSION   DANLXO010000198 DANLXO010000000
VERSION     DANLXO010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.203"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..218
                     /locus_tag="PXD69_002662"
     CDS             <1..218
                     /locus_tag="PXD69_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284791.1"
                     /translation="KNLTDESEEQAILAYLTENIMARIEKEQPLEKTLILYSEQLASF
                     EQKSPMALHREKFEAKPTGLAELINNL"
     gene            229..1179
                     /locus_tag="PXD69_002663"
     CDS             229..1179
                     /locus_tag="PXD69_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HDL6284792.1"
                     /translation="MSLSTFAHALKLDKQGNVILFDDSPEEQAKLISRLKQNRLFKLL
                     NLVQTKHAKGEAIGLFTPIAGTTNTESGEEREPKQALAPAQKYHCEQINIDSYIRYEK
                     IDAYNLENSLEERLNQLLDDNLLRGLLMVGWQGVSRADTSNATNNQLAQDVKKGWLQK
                     IREGKPEAVINGATIGKEQQYKSLNALIKQGLGKISPAYAMGGDMIAICGRDIIADDV
                     IQLEHNDLSENLADLLTLCQQAKGGLKAVSIPYFPSNAILITRLDNLSLYLHLNNIRR
                     KAFDTPQKDSVETFYSLNVDYIVEDFNACCLIENIEVIEE"
     gene            1176..1370
                     /locus_tag="PXD69_002664"
     CDS             1176..1370
                     /locus_tag="PXD69_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284793.1"
                     /translation="MSLESYIQQAEEMELLEKLDFVSDLLELEKVSEIEAYRILTAHG
                     EPKPQPAQEKLIGCVDFLDD"
     gene            1488..>1715
                     /locus_tag="PXD69_002665"
     CDS             1488..>1715
                     /locus_tag="PXD69_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284794.1"
                     /translation="MTNYKLPARKWYTLEQATKRIKQLTGEDIEIEDLLHYWYLRKLE
                     LSIYLNRNGNGDLIIGNHSFNKEEYIVLEQPQ"
BASE COUNT          644 a          340 c          323 g          408 t
ORIGIN      
        1 ataaaaacct cacagatgaa agtgaagagc aagctattct ggcatatcta acagaaaata
       61 taatggctag aattgaaaag gaacagccac ttgaaaaaac attaattctt tattctgaac
      121 agttagcaag ttttgaacaa aaatcgccaa tggcattaca ccgtgaaaaa tttgaagcaa
      181 aacctaccgg cttagctgaa ttaattaata acttataaga ggtaaaaaat gagtttatcc
      241 actttcgccc acgcattaaa actagataaa caaggtaacg ttattttatt tgacgatagc
      301 cccgaagaac aggcaaaact aattagccgc ttaaaacaaa atcgcctttt taaattattg
      361 aatttagtgc aaaccaagca cgcaaagggc gaagcgattg ggctattcac accgatagcc
      421 ggcacaacca acaccgaaag cggagaggaa cgagagccaa aacaagccct tgcacccgct
      481 caaaaatacc actgcgaaca aatcaacatt gatagctata ttcgctatga aaaaatcgat
      541 gcttacaacc tcgaaaacag cttagaagaa cgcttaaatc agttacttga tgacaacctt
      601 ctaagagggc ttttaatggt tggctggcaa ggcgtaagcc gtgcagatac atcaaacgcg
      661 acaaacaacc aactcgccca agacgtgaaa aaaggctggc tacaaaaaat cagagagggc
      721 aagcccgaag cggtaattaa tggagcaacc ataggcaaag agcaacaata caaaagccta
      781 aatgctctga ttaagcaggg attaggcaaa attagcccag cgtatgcaat gggcggagat
      841 atgatcgcca tttgtgggcg ggatattatc gctgatgatg taattcagct tgaacacaac
      901 gatttaagcg aaaacctagc cgacttatta accttatgcc aacaagctaa aggcggacta
      961 aaagcggtaa gtattcccta cttcccaagc aatgcgattt taatcactcg attagataac
     1021 ctttcgctat atcttcattt aaacaatatc cgccgtaaag cgtttgatac gccacaaaaa
     1081 gacagcgtag agacatttta ctccctcaat gtggattaca ttgtagaaga ttttaacgcc
     1141 tgttgtttaa ttgaaaatat tgaggttatt gaagaatgag cctagaaagc tatatccaac
     1201 aagcggaaga aatggagctt ttagaaaaac tcgattttgt ttcagacctg ttagaacttg
     1261 agaaagtcag cgaaattgaa gcctatcgca ttttaaccgc ccacggcgaa cctaaacccc
     1321 aaccggcaca agaaaagcta ataggttgcg tagattttct tgatgactaa cccaagcccc
     1381 gaaaggggct ttttgcattt ttgcaacaaa aaacgaccgc ttgcaccctt tgaaattatt
     1441 gctatcatta ataaaaaaca ataaccaaat caaatgagag tacagcaatg acaaactata
     1501 aactaccggc tagaaagtgg tacaccttag agcaggcaac aaaacgcatt aaacaactca
     1561 ctggcgaaga tatagaaata gaagatttat tacattattg gtatttaaga aagctagaat
     1621 taagtattta tttaaataga aacggaaatg gcgatctgat tataggcaat cattctttta
     1681 ataaagaaga atatattgtc ttggaacaac cacaa
//
LOCUS       DANLXO010000199         1700 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.204, whole genome shotgun sequence.
ACCESSION   DANLXO010000199 DANLXO010000000
VERSION     DANLXO010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.204"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>1700
                     /locus_tag="PXD69_002666"
     rRNA            <1..>1700
                     /locus_tag="PXD69_002666"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          508 a          330 c          505 g          357 t
ORIGIN      
        1 agtcgataag aggcgtttaa tccaagatgt ccgaatgggg aaacccagta ggtgaagaac
       61 ctactatcac ccagtgaata catagctgtg tgaggcaaac cgggagaact gaaacatcta
      121 agtaccccga ggaaaagaaa tcaaccgaga tttcgttagt agcggcgagc gaacgcgaaa
      181 gagccagtta gtgatagcag taaagttagg ggaatgttct gggaaggaca atcgtagagg
      241 gtgataatcc cgtaccttaa aactccattg tggtactagg ctaacaacaa gtagggcggg
      301 acacgtgata tcctgtttga agatgggggg accatcctcc aaggctaaat actcctgatt
      361 gaccgatagt gaaccagtac tgtgaaggaa aggtgaaaag aaccccggcg aggggagtga
      421 aatagaacct gaaaccttgt gcgtacaagc agtgggagca agagtaatct tgtgactgcg
      481 taccttttgt ataatgggtc agcgacttat attttgtagc aaggttaact gaataaggga
      541 gccgtaggga aaccgagtct taactgggcg tgtagttgca aggtatagac ccgaaacccg
      601 gtgatctagc catgggcagg ttgaaggttg ggtaacacta actggaggac cgaaccgact
      661 aatgttgaaa aattagcgga tgacttgtgg ctgggggtga aaggccaatc aaaccgggag
      721 atagctggtt ctccccgaaa tctatttagg tagagccttg agcggacacc ttcgggggta
      781 gagcactgtt tcggctaggg gtccatcccg gattaccaac ccgatgcaaa ctgcgaatac
      841 cgaagagtga tactcaggag acacacggtg ggtgctaacg tccatcgtgg agagggaaac
      901 aacccagacc gccagctaag gtcccaaagt ctatattaag tgggaaacga agtgggaagg
      961 cttagacagc taggatgttg gcttagaagc agccaccatt taaagaaagc gtaatagctc
     1021 actagtcgag tcggcctgcg cggaagatgt aacggggctc aaatatagca ccgaagctgc
     1081 ggcatcagac gaaagtctgt tgggtagggg agcgttgtgt aagtcgatga aggtggattg
     1141 agaagtctgc tggagatatc acaagtgcga atgctgacat aagtaacgat aaaacgagtg
     1201 aaaaactcgt tcgccggaag accaagggtt cctgtccaac gttaatcggg gcagggtgag
     1261 tcggccccta aggcgaggct gaaaagcgta gtcgatggga aacgggttaa tattcccgta
     1321 cttgtaataa ctgcgatgtg gggacggaga aggttaggtt agcagactgt tggatgtctg
     1381 tttaagccgg taggtgggaa gattaggcaa atccggtctt ccttaacacc gagaagtgat
     1441 gacgagtctc tacggagatg aagtaatcga taccacgctt ccaggaaaag ccactaagct
     1501 tcaggttatt ataaaccgta ctataaaccg acacaggtgg tcaggtagag aatactcagg
     1561 cgcttgagag aactcgggtg aaggaactag gcaaaatagc accgtaactt cgggagaagg
     1621 tgcgccggcg tagattgtag tcccttgcgg atgaaggttg aaccggtcga agataccagc
     1681 tggctgcaac tgtttattaa
//
LOCUS       DANLXO010000200         1698 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.205, whole genome shotgun sequence.
ACCESSION   DANLXO010000200 DANLXO010000000
VERSION     DANLXO010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.205"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            12..698
                     /locus_tag="PXD69_002667"
     CDS             12..698
                     /locus_tag="PXD69_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284795.1"
                     /translation="MDTLASRLKIVLDQKGLTQEKFAEQIGVSQPSVFKILNGQTRNP
                     TRIYEIANVLDVDVNWLKTGKGEAPDFAKIGKNPTAYEEESSMLRLEVLDVYASAGNG
                     SFVTGDLTAYTHAVEFENAYFAQVFQRANAKGLSIINVDGDSMEPTIGNGDLLFVDTT
                     KSAYQGDGVYVFSYGENLYVKRLQFAGDELLVISDNPLYKEWRITSENEHKFQIHGKV
                     EFMQGHIRRV"
     gene            702..1220
                     /locus_tag="PXD69_002668"
     CDS             702..1220
                     /locus_tag="PXD69_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284796.1"
                     /translation="MEHQNLTHLVYITSHKQIGVYSISNLNIDDLYFKGYCIQKNRVI
                     TLRADRIIKQFDDLALAENYAKNIPQDVFYLFDSLLNQQRKEKITPIYKIGLCFTGFK
                     QARKNELIQLAVDNDLRVVQNVTGAVDFLIFDKESKTVGPAKLAKAEKLGIKIIDDEE
                     FLYMLETGVVPD"
     gene            1238..1648
                     /locus_tag="PXD69_002669"
     CDS             1238..1648
                     /locus_tag="PXD69_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284797.1"
                     /translation="MFIPKSSKLKTNNYIEELNIKSIGETDMKKALTLLALSLFALPV
                     QADSLELARNKVKQIFISDEEPKVKDATWTAPFIFKVGVFDDGTKRDGYAEYVCQVLY
                     DHGFKGKGVLVSVIDIKKLVQTGDWVDLGKAKCQ"
BASE COUNT          588 a          276 c          336 g          498 t
ORIGIN      
        1 aggagttcct aatggatact ttggcaagtc gtttgaaaat cgttttagac caaaaaggtt
       61 taacacagga aaaatttgca gaacaaatag gtgtttcaca gccatctgtt tttaaaatcc
      121 tgaatggaca aactcgaaat cccacaagga tttatgaaat tgcaaacgtc ctagatgtcg
      181 atgtaaattg gctcaaaacc ggcaaaggcg aagcaccaga ttttgcgaaa atcggaaaaa
      241 atccgaccgc ttatgaagag gaaagctcaa tgcttcgact tgaggtgtta gatgtatatg
      301 cctctgccgg caatggtagt tttgtcacgg gagacttaac cgcttacacg cacgcagtag
      361 aatttgaaaa tgcctatttt gcacaagtct ttcaacgtgc aaatgccaaa ggcttatcaa
      421 ttattaatgt agatggcgac tcaatggagc caactatcgg taacggtgat ttgctgttcg
      481 tagataccac taaatccgct tatcaaggcg atggtgtcta tgttttcagc tatggcgaaa
      541 acttatatgt aaaacgcttg cagttcgccg gtgatgaatt gttagtcatt tccgacaatc
      601 cgctttataa agagtggaga atcacatcag aaaatgagca taaattccaa attcacggta
      661 aagtggaatt tatgcaaggg catattagga gggtttaggt gatggaacat caaaatctaa
      721 ctcatcttgt ctatattaca tcacataaac aaattggagt ttattcgatt tctaatttga
      781 atattgatga cctttacttc aaaggttact gtattcagaa aaatagagtt atcacattaa
      841 gagctgatcg cattattaaa caatttgatg atttagctct tgccgaaaat tatgccaaaa
      901 atattcctca agatgtgttt tatctatttg attctcttct gaaccagcaa cgaaaagaaa
      961 aaataacacc gatctataaa atcggtttgt gttttactgg atttaagcaa gctagaaaaa
     1021 atgaattaat tcaactagca gtagataatg atttgagagt agtacaaaac gtaactggtg
     1081 cagttgattt tttaattttc gataaagagt cgaaaactgt tggaccagca aaactagcaa
     1141 aagctgaaaa gttaggaatt aaaatcatcg atgatgaaga atttttatat atgttagaaa
     1201 ctggcgttgt gccggattag gtttgacttc tcaatagatg tttataccaa aatcatctaa
     1261 actaaaaact aacaattaca tagaagaatt aaacatcaaa tcaatagggg aaaccgatat
     1321 gaaaaaagca cttacactac ttgcactatc actatttgca ttgcctgtac aagccgatag
     1381 cctcgaactt gctcgtaata aagtaaagca aatttttatc agtgatgaag agccaaaggt
     1441 aaaagatgcg acttggactg caccatttat ctttaaggtt ggagtttttg atgacggcac
     1501 gaaaagagat ggctacgccg aatatgtttg ccaagtttta tacgaccacg gatttaaagg
     1561 taaaggtgtg ttggttagcg taatcgatat aaaaaaacta gtccaaacag gtgattgggt
     1621 tgatcttggc aaagctaaat gtcagtaata cataagggac agattattct gtctctttgt
     1681 atttaatcat taatgaag
//
LOCUS       DANLXO010000201         1633 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.206, whole genome shotgun sequence.
ACCESSION   DANLXO010000201 DANLXO010000000
VERSION     DANLXO010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.206"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>1633
                     /locus_tag="PXD69_002670"
     CDS             <1..>1633
                     /locus_tag="PXD69_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL6284798.1"
                     /translation="KTNGVDQLATDLKTKIETDFPNINFSNEKYKDLIKGYSNIQGNL
                     VTAIPNFLEKVNNDFAISARNRDLYSHYLPYQGIDDWENSNFNFRTLNGVYYDDNLTS
                     TELLRKFMIQRDYNTLYALSSARTGNADSLAKNYHLVVAKMSYENLKKELSKKPDSTF
                     NKLKKLYETNGEFLNEYILDNFRGNPLELLTVPALKESLENQESFPSRLYQKFNIFNQ
                     AIAQTTSNITKEEIDDLEKTVENFNNFKNSIDYDSDAWIFNKEEYRTYMNDNVIPFME
                     KVEEFTETLKTLSRDDLSAEERTTKTIDSVKLRIYLNEQARNRKNYINGFVPTDWIPE
                     ITDQMTKSKNLWLKYEEEAKTTLKPYQEETISRVIQDEINKKMAEIGTTTLEIGGKEH
                     ELEDLENQINALALTDEEKLAEDVENDLISKLDEAKAALAKNQQTLKEKRDELLGLNN
                     KLDSSPLVKKGKNALAEGTNAFASGENAIAFGTDSQATGNNAIALGANSKANAESAIA
                     IGKGAQALKEKALALGENAIANRASAIAIGDNHSS"
BASE COUNT          651 a          264 c          279 g          439 t
ORIGIN      
        1 caaaaactaa tggggtagat caattagcaa cagacttaaa aactaaaatt gaaactgatt
       61 tccctaatat taatttttca aatgaaaaat ataaagatct cattaaaggt tatagcaata
      121 ttcaaggtaa cttagtaaca gccattccta acttcctgga gaaagttaat aatgattttg
      181 ctataagtgc tagaaataga gacttatata gtcactacct tccttatcag ggtattgatg
      241 attgggagaa ttctaatttt aactttcgaa cactaaatgg agtttattat gatgataatc
      301 taacttcaac agaactcctg cgaaaattta tgattcaaag agattataac actctttatg
      361 ctctaagttc tgctcgcaca ggaaatgctg atagtctggc taaaaattac catcttgtag
      421 ttgcgaaaat gtcctatgaa aacctgaaaa aagaattatc caagaaaccc gactctacat
      481 ttaataaact gaaaaagctg tatgaaacca atggtgaatt cttaaatgaa tatattttag
      541 acaatttccg aggaaatcca cttgaattat taacagtacc tgcgcttaaa gaaagtttag
      601 aaaaccaaga gtcattccct agcaggctgt atcagaaatt taatattttc aaccaggcta
      661 ttgcacagac cacatcaaac attactaaag aagaaattga tgatttagaa aaaactgtag
      721 aaaatttcaa taacttcaaa aattcaattg attatgatag cgatgcgtgg atctttaata
      781 aagaagaata tcgcacttat atgaatgata atgtaattcc ttttatggag aaggtagagg
      841 aatttactga aacattaaaa actttatcta gagatgactt aagtgcagag gaacgtacaa
      901 ccaaaacaat tgactccgtt aaattaagaa tatatctcaa tgaacaagca cgaaatcgta
      961 aaaattatat taatggattt gtacctaccg attggattcc tgaaattaca gatcaaatga
     1021 caaaatccaa aaatctatgg ttaaaatatg aagaggaagc caaaacaaca ttaaaaccat
     1081 accaagaaga aacaatatct agggttatac aagatgaaat taataaaaaa atggctgaaa
     1141 taggtactac aacactagag attggtggta aagaacacga gctcgaggat cttgaaaacc
     1201 aaattaatgc tttagcttta actgatgaag aaaaacttgc ggaagatgtg gaaaatgatt
     1261 taatctcaaa gcttgatgag gctaaagcag ccttagcaaa aaaccagcaa acgctcaaag
     1321 aaaagcgtga tgaattacta gggctaaata acaaattaga tagctcacca cttgttaaaa
     1381 aaggtaaaaa tgcacttgca gaaggcacga atgcctttgc ttctggtgaa aatgccatcg
     1441 cattcggcac ggattcacaa gctacaggta ataacgctat cgcactaggt gcaaattcaa
     1501 aagcaaacgc agaaagtgcg attgcaattg gtaaaggtgc acaagcatta aaagaaaaag
     1561 cccttgcttt aggcgaaaat gccattgcca acagagcatc tgctattgcg attggtgata
     1621 accattcatc taa
//
LOCUS       DANLXO010000202         1612 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.207, whole genome shotgun sequence.
ACCESSION   DANLXO010000202 DANLXO010000000
VERSION     DANLXO010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.207"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            196..1560
                     /gene="glmU"
                     /locus_tag="PXD69_002671"
     CDS             196..1560
                     /gene="glmU"
                     /locus_tag="PXD69_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDL6284799.1"
                     /translation="MTQLSVVILAAGKGTRMYSDLPKVLHPVAGKPMVKHVIDTAKQL
                     DAQQIHLIYGHGADLLKARLSEEPVNWVFQAEQLGTGHAMQQAAPFFADDENIVMLYG
                     DAPLITKATLERLIAAKPENGIALLTVELENPTGYGRIIRENGSVVAIVEQKDANEAQ
                     LKVKEVNTGVMVASGASFKKWLKNLNNNNAQGEYYITDVIAMANQEGFKVQAVQATEF
                     MEVEGANNRLQLAALERFYQKREAEKLLLAGVTIIDPSRFDLRGTVTHGKDVQIDVNV
                     ILEGEIKLGNNVKIGAGCVLKNCEIGDNVEIKPYSVIEDSIVGAKSAIGPFSRLRPGA
                     ELAEETHIGNFVEIKKATIGKGSKVNHLTYVGDAEIGKECNIGAGVITCNYDGANKFK
                     TIIGDNVFVGSDSQLIAPVTIASGSTIGAGATVTKDIAENELVISRVPQRHIQGWQRP
                     TKKK"
BASE COUNT          540 a          320 c          342 g          410 t
ORIGIN      
        1 taagtgctac ctatttatac cagttttcca caagataaga atcgacataa tagaaaaaga
       61 taacaaacag acaaatttct tttgcttgtc gatgaaatcc acttataaaa aggttaaaat
      121 attacaaaaa tatcacttat agcaatttac acgttactat aagccttcat ctatttagtc
      181 aaataaggat tctatatgac tcaactgagc gttgttattt tagctgccgg taaaggcact
      241 cgtatgtatt cagatttacc caaagtgtta cacccagttg ccggtaaacc catggtaaaa
      301 cacgttattg atactgccaa acagctagat gcccagcaaa ttcatttaat ttacggacac
      361 ggtgccgatc tgttaaaagc acgtttaagc gaagagcctg taaactgggt attccaagcc
      421 gaacaattag gcacaggaca tgcaatgcaa caagcagctc cttttttcgc tgatgatgaa
      481 aacattgtaa tgctttatgg tgatgccccc ctaatcacaa aagccacttt agagcgttta
      541 atcgcagcca aaccggaaaa tggtattgca ttactaaccg ttgaattgga aaacccgaca
      601 ggctacggac gaattattcg tgaaaatggt tctgtggtag cgattgttga gcaaaaagat
      661 gccaatgaag cacagcttaa agtcaaagaa gtgaataccg gcgtgatggt agcaagcggt
      721 gcgagcttca aaaaatggtt gaaaaaccta aataacaaca atgctcaagg tgaatattac
      781 atcactgatg tgatcgcaat ggcaaaccaa gaaggcttta aagtacaagc ggttcaggca
      841 actgaattta tggaagtaga aggggcaaac aaccgtttgc aacttgctgc acttgaacgg
      901 ttctaccaaa aacgtgaggc ggaaaaactg ttattggctg gtgtaactat tatcgaccca
      961 agccgttttg atcttcgtgg cactgtcacc cacggaaaag atgttcagat cgatgtgaat
     1021 gtcattctag aaggtgaaat caaactcggt aacaatgtaa aaattggtgc aggctgcgta
     1081 ctgaaaaact gcgaaattgg cgataatgtt gaaattaaac cttattctgt gattgaagat
     1141 tcgattgtcg gggcaaaatc cgctatcggt ccattctctc gcttacgccc gggggcagaa
     1201 ttagcggaag aaacccatat cggtaacttt gtggaaatca aaaaagctac catcggcaaa
     1261 ggttcaaaag taaatcatct cacttatgta ggcgatgcgg aaatcggcaa agaatgtaac
     1321 atcggagcag gtgtaatcac ttgtaactat gatggtgcga ataaattcaa aaccattatt
     1381 ggcgataacg tatttgtcgg ctcagacagc caactcattg ccccggtcac gattgccagc
     1441 ggttcaacca ttggtgccgg tgcaacagtc actaaagaca ttgcggaaaa tgaactggta
     1501 attagccgtg taccacaacg ccatattcaa ggctggcaac gcccgactaa aaagaaatag
     1561 tgccagtggt caaaagttat tatatttaaa aattggcttt gccaataaca gc
//
LOCUS       DANLXO010000203         1590 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.208, whole genome shotgun sequence.
ACCESSION   DANLXO010000203 DANLXO010000000
VERSION     DANLXO010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.208"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..268)
                     /locus_tag="PXD69_002672"
     CDS             complement(<1..268)
                     /locus_tag="PXD69_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284800.1"
                     /translation="MTKTKHKHPLAEAFYQLGKDVGEINRRLVVVDEQSLKLQELKQT
                     INEQTEQIKTLGTVVNKLIDALQQSQSLNVRSESAVAATENQDHL"
     gene            complement(261..410)
                     /locus_tag="PXD69_002673"
     CDS             complement(261..410)
                     /locus_tag="PXD69_002673"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284801.1"
                     /translation="MDNILITIHPTETIDITIDKLVVIHIGEEYGDTPDFLTIYQQAK
                     ELNDD"
     gene            complement(644..937)
                     /locus_tag="PXD69_002674"
     CDS             complement(644..937)
                     /locus_tag="PXD69_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284802.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGEESDSEVTN
                     FVIITSEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYNHLKETGQIVV"
     gene            complement(1060..>1590)
                     /locus_tag="PXD69_002675"
     CDS             complement(1060..>1590)
                     /locus_tag="PXD69_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284803.1"
                     /translation="NLAAISANLGKVTAGTITGTTITGNTISGGSINGTTISGTTISG
                     GTIKGARLEGATGKFTGELEVSQLIGGGVIEQVTGKLKYSHRNRIYEGQEHGENSSSP
                     IYRHEYIYKATVTINAAPTRRYIEIIGSESFILEANQSITKTIEKSLNRNASGSSLDF
                     IVLAYSISTAKYISIS"
BASE COUNT          405 a          314 c          300 g          571 t
ORIGIN      
        1 ttaaatgatc ttgattttcg gttgctgcta cagcagattc tgatcttaca tttaaacttt
       61 gtgactgttg taatgcatca ataagtttat ttaccactgt tccgagtgtt ttaatttgct
      121 cggtttgctc attaatagtc tgctttaact cttgcagttt taatgattgc tcatccacaa
      181 ccactaatcg acggttaatc tctcctacgt ctttacctaa ttgataaaat gcttctgcaa
      241 gtgggtgttt gtgtttagtt ttagtcatcg ttaagctcct ttgcttgttg gtatatagtt
      301 aaaaagtcag gtgtgtcacc atactcctca cctatatgga taactaccag tttgtctatg
      361 gtgatatcaa tagtttcggt tggatgtata gtgattaaga tattgtccat attcccgcct
      421 taaatttggg tttggtcagg gataagttgg atcgtgccgt agtactgcca ttttgggtgg
      481 atagctcaat ttgaggctct gtgctgccct ctactatggc gtgtaaatcc agcctaatac
      541 cctctaaatt tacaggctcg ccatttgttt gcctaaaaaa aaaggcgata acttacgtca
      601 tcgcctctga aaaacttaaa tttatgcttt tgcatttaga cccctacact acaatctgac
      661 cggtttcttt gaggtggttg tagatacgtc ctaacataat ctgcgttggc gttttgccaa
      721 tatcctcttt tgttagcggt gcatcagtaa tcgctttggc tgattgagca tcaatatatt
      781 tgtactcact tgtgatgatt acaaagtttg ttacctcgct atcgctctcc tcacctgtgc
      841 caacgacata tttagcattg agtgagccgt cgtcttgagt tgagtagctt gcgatggtgg
      901 aatacattgg gtttaagatt ttgttaaaag ttgtcataat ttttcctttt atcgatagtt
      961 gaaataaaaa caatcgcctg aattgacctg caagcggttg gttttggata tttaaaaaag
     1021 ctgtggctat ccgcactcag tactacattg aggcgataac taactgatag agatatattt
     1081 agccgtcgaa atggaatagg ctaaaacaat aaaatctaaa gagctaccac ttgcatttct
     1141 atttaatgat ttctctattg tttttgtgat tgattgattt gcttctaaaa tgaatgactc
     1201 acttccgatg atttcaatat acctccttgt cggcgctgca tttatggtga cagttgcttt
     1261 atagatatat tcgtgtctat aaattggaga ggaggagttt tctccatgtt cttgcccctc
     1321 ataaatgcga ttacgatgtg aatattttaa tttgcctgta acctgctcta taacacctcc
     1381 ccctattaat tgagatactt caagttcgcc ggtaaatttg ccagtagccc cctccaatct
     1441 tgcacccttt attgtgccgc cagagatagt tgtaccgcta attgttgtac cattaatact
     1501 tccgccacta attgtattac cagtaattgt cgtacctgta attgtaccag cagttacctt
     1561 accaagattt gccgatattg ccgctaaatt
//
LOCUS       DANLXO010000204         1552 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.209, whole genome shotgun sequence.
ACCESSION   DANLXO010000204 DANLXO010000000
VERSION     DANLXO010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.209"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            137..394
                     /locus_tag="PXD69_002676"
     CDS             137..394
                     /locus_tag="PXD69_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284804.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFYNYQQFMPEVEAKESLR
                     EQEPELDDGYNEEEYSEEEYSDENDASDENDNYDETYDDNF"
     gene            532..687
                     /locus_tag="PXD69_002677"
     CDS             532..687
                     /locus_tag="PXD69_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284805.1"
                     /translation="MLFKEKGYDEFLTQKIAKGRAELESGKGIPLEQATLLVQSTIEE
                     TAQELDD"
     gene            741..899
                     /locus_tag="PXD69_002678"
     CDS             741..899
                     /locus_tag="PXD69_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284806.1"
                     /translation="MTEEYQNFLIEQVKQGLDDIENGRVISLEESRQLCQKTIYETLQ
                     ELQGAVYA"
     gene            892..1209
                     /locus_tag="PXD69_002679"
     CDS             892..1209
                     /locus_tag="PXD69_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6284807.1"
                     /translation="MLSRKEVLMTRRASMNLQQIIRNVVEYTYSYESGDKLSAEIHNT
                     LDNLSYFPRIGVIGSVENTRECFCRGYRIIYRETENQVQILAIIHCRQQYPTDYYRSA
                     FKA"
     gene            1330..>1552
                     /locus_tag="PXD69_002680"
     CDS             1330..>1552
                     /locus_tag="PXD69_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284808.1"
                     /translation="MSLLKKAQTFISIFNEVRAKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCGIHAVETYD"
BASE COUNT          568 a          288 c          279 g          417 t
ORIGIN      
        1 gactgcttca aaaatatcgc cggttaaact caccaataag gcctcagggc attctgtatt
       61 tgcctctcct ttttcagcac accaaccata agcctcacct tggtaaatac gaacatatgc
      121 cacccctcaa ttagggatga tatgccacgc tgatcctgaa tatgtaaaat acaactacgc
      181 cggactttgg gaaaaaggca gcgatggcac ttttttctac aattaccagc aatttatgcc
      241 tgaagttgaa gctaaagaat cactaaggga acaagaacct gaacttgatg atggatataa
      301 cgaagaggaa tatagcgaag aagaatattc cgatgaaaat gatgccagcg atgaaaacga
      361 taactacgat gaaacttatg atgataattt ttaaatattc ccaaaccaca cttccaaaaa
      421 ccctgctctt gacactctat tgctttaagc gtaaattatt ccaatatttc gcatttagga
      481 gaacataatc cctatgcctg aaagccttgt aataagtgaa aggaacataa aatgctattt
      541 aaagaaaaag gctacgatga gttccttact caaaaaattg caaaaggcag agctgaatta
      601 gaatccggaa aaggtattcc tcttgagcaa gccacattgt tagttcaatc aactattgaa
      661 gaaactgctc aagaactgga cgattaacaa tttgtaacat tgctaatata tctatataca
      721 actaatgata ggagttatcc atgacagaag aataccaaaa cttcttaata gagcaagtaa
      781 aacaaggact tgatgatata gaaaacggac gtgttatttc attagaagaa agccgtcaac
      841 tgtgtcaaaa aaccatatat gaaaccttgc aagagctaca gggagccgtg tatgcttagt
      901 cgaaaagagg tgttaatgac tcgcagagca agtatgaatt tacaacaaat cattcgtaat
      961 gttgtggaat atacttatag ctatgaaagt ggtgataaat tatctgcgga aattcataac
     1021 actttggata atctttctta ttttccacga attggtgtta taggttcagt agaaaatact
     1081 agagaatgct tttgccgagg ttatagaatt atatatcgag aaacagaaaa tcaagtgcaa
     1141 attttagcca ttatccattg tcgtcaacaa tacccaaccg actattatcg ctctgcattc
     1201 aaagcataac aggagctata aaatggaaat aaaaagaaaa atgaccgtag ccgaattaaa
     1261 actcaaggca atgctcgcca agcctaccat agttcaataa tattaggtgc aaaaaacagg
     1321 agaaccacaa tgtctctact taaaaaagca caaacgttta tctctatttt taatgaagtg
     1381 cgagctaaaa atgaagctca acgccagtct tcaaacaatt taaatgttgc cttgaaaaat
     1441 gctgctgaaa tgagagctga gatgaatggg ttctccctta agcctcaaaa gcgttctact
     1501 tactttgctg accattatgg ttgtggtatt catgcagtag aaacctatga ta
//
LOCUS       DANLXO010000205         1549 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.210, whole genome shotgun sequence.
ACCESSION   DANLXO010000205 DANLXO010000000
VERSION     DANLXO010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.210"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..566
                     /locus_tag="PXD69_002681"
     CDS             <1..566
                     /locus_tag="PXD69_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284809.1"
                     /translation="FELEHIFKKYRFDSFSTYTGLISIYSSTFGSVNIESEIIKNGIC
                     LNFARQLISAKHPETKKRISLHLKILDFDKGRNTYLAPADLFILDEHLNEFILGNGGD
                     EIEKISKNNKTQFSSTIRENQINFIRALLYMDYGIETPQEVKNAINSGELGRKIEKFR
                     RENPNIENDKNFKFPTSVTLSNWYSKA"
     gene            644..895
                     /locus_tag="PXD69_002682"
     CDS             644..895
                     /locus_tag="PXD69_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284810.1"
                     /translation="MQLQKTISTFTQPNHRGIYVMTYSEQSYLNVKDVCEMLQLNRST
                     IYRQIKQGIFPKPTKIGKSSRWKFADIKAFLEPKPQEAN"
     gene            895..1275
                     /locus_tag="PXD69_002683"
     CDS             895..1275
                     /locus_tag="PXD69_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL6284811.1"
                     /translation="MAGLSIICPFCGNTARIRGSSRPSLLSYQAQLTCSNCGQLKADF
                     VGQLINIKRAVFIECDEANQWDKPENELIKEGKIQGKDNAQRLKELRGSQQDLFAKVP
                     GQLPPEKITPAEKIAKRANLSKTH"
BASE COUNT          595 a          285 c          277 g          392 t
ORIGIN      
        1 aatttgaatt agaacatata tttaaaaagt ataggtttga tagtttcagc acttatactg
       61 gattaatttc tatttacagc agtacttttg gtagtgtaaa tattgaatct gaaatcatta
      121 aaaatggaat ttgtttaaat tttgcaagac aattaatatc agcaaagcac ccagaaacaa
      181 aaaaaagaat aagtttacat ctaaaaatac tggattttga caaaggcaga aatacttatt
      241 tagcacctgc agatttattt attcttgatg aacatctaaa tgagttcata ttaggtaacg
      301 gcggagatga aatagaaaaa atatcaaaga ataacaaaac tcaattcagc tcaacaatac
      361 gagaaaacca aatcaatttt attagagcct tgctttatat ggattatggg atagaaacgc
      421 ctcaagaagt aaaaaacgcc attaattcag gggaactagg cagaaaaata gagaaattta
      481 ggagagaaaa ccccaatata gagaacgata aaaatttcaa attccctaca agtgtaaccc
      541 ttagcaactg gtattcaaaa gcctaaaata ttggaaattt ccgaatctac tttggaaatt
      601 tccaaacttc taaaacctac tcacctcaca atctccccca acaatgcaac tacaaaagac
      661 aataagcaca ttcacgcaac caaaccacag ggggatttat gtaatgacct attcagaaca
      721 aagctattta aacgtgaaag atgtatgcga aatgctacaa ctcaaccgct caactattta
      781 tcgacaaatt aagcaaggga ttttccctaa gccaactaag atcggaaaat caagccggtg
      841 gaaatttgcc gacatcaaag catttttaga gccaaaacca caggaggcga actaatggca
      901 gggctttcta ttatttgccc gttttgtggc aataccgcac gaattagagg cagttctcgc
      961 cctagccttt taagttatca agcacagcta acttgttcaa attgcggaca attaaaagcc
     1021 gactttgtag ggcagctaat caacatcaaa cgggccgtat ttattgagtg tgatgaagca
     1081 aatcaatggg ataaacccga aaatgaacta atcaaggagg gaaaaattca aggcaaagac
     1141 aatgctcaac gcctcaaaga actaagaggc tcacagcaag atttatttgc aaaggtgccg
     1201 gggcaactac cgcccgagaa gatcactccg gcggagaaaa tcgccaagcg ggcaaacctt
     1261 tcaaaaacgc attaaacagg gggataaatg gcaacaaaaa agccccgcaa ggcaaaccat
     1321 acggagctat taaaatcgca taatgcgaaa gatatgcaaa gaaattaaag caggcttgac
     1381 gatttctgaa ggtgttagat tctttctaaa gtctttaggg ataggtttat ttctagcatt
     1441 gtttttttat tttttgccgt atttagcaga atttataatc gccgtaaaaa aacaactagc
     1501 aaaaaaatcg gcttactttc aatgataaaa gcaagccgaa atgacaatc
//
LOCUS       DANLXO010000206         1495 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.211, whole genome shotgun sequence.
ACCESSION   DANLXO010000206 DANLXO010000000
VERSION     DANLXO010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.211"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            39..1007
                     /locus_tag="PXD69_002684"
     CDS             39..1007
                     /locus_tag="PXD69_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS1 family transporter"
                     /protein_id="HDL6284812.1"
                     /translation="MCLKLLFGFDNLPVVYVLFTVIQVGLSINGFKGIKWLENVSCVF
                     LIGILAYMLYVVNTKFSVEIGERFANIEGTWGMPFWAATTAFLGIYSTMILNASDYSR
                     HVKKGTTPTATGVIYVLSILPVTLFMGLIGLLVTAATGNSDPIEVFATAMDNKFLTVI
                     TLLFIAFAQVTTNVLNNIVPPSYILMDSFKMKWSHATILVGILSICVMPWKLVTAESA
                     DGLSLFIKIYSAFLGPIFAVMVVDYYILRKRTLNVNDLYNKEGIFKGINWAAIIAIAI
                     GSFCSLIVVDLSWYVSLIPSGLSYYILMRVLKSSEAFRKGTVLEHQ"
     gene            complement(1272..>1495)
                     /locus_tag="PXD69_002685"
     CDS             complement(1272..>1495)
                     /locus_tag="PXD69_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284813.1"
                     /translation="SLNAKYVVGTGDDTDGEVTNFVIITSEYKYIDAQSAKAITDAPL
                     TKEDIGKTPTQIMLGRIYKYLKETGQIVV"
BASE COUNT          436 a          254 c          279 g          526 t
ORIGIN      
        1 ttgaattaaa tgataaaacg caaaaaatag ctgtcaatat gtgtttaaaa ctgttgttcg
       61 gttttgataa cttgcctgtt gtttatgtgc tattcactgt tattcaagtt ggcttatcca
      121 ttaatggttt taaaggtatt aaatggttgg aaaatgtttc ttgtgtgttc ctcatcggta
      181 ttcttgctta tatgctttat gttgtgaata caaaattctc tgtagaaata ggcgagcgct
      241 ttgccaatat tgaaggcact tggggaatgc cattctgggc tgcaactaca gcattcttgg
      301 gtatttattc aacaatgatt ttaaatgctt ccgattattc tcgccacgtt aaaaaaggaa
      361 caaccccaac agcaacaggt gtgatttatg tattatcaat cctccctgta accttattta
      421 tgggtttaat agggttgtta gttacggcag ctacaggcaa tagtgaccca attgaagtat
      481 ttgcaactgc aatggataat aaatttttaa cagtaataac gttattattc attgcttttg
      541 cacaggttac gacaaacgtg ttgaataata ttgttccgcc atcttacatt ttaatggatt
      601 catttaaaat gaaatggtcg catgccacca ttttagtggg cattctttct atatgtgtaa
      661 tgccttggaa attggtaact gctgaatcag cagatggatt atctttgttt attaaaattt
      721 actcggcatt cttaggccct atttttgcgg taatggtcgt cgattactac atcttaagaa
      781 aacgtacttt aaacgtaaat gacttatata ataaagaagg tattttcaaa gggattaact
      841 gggcagcaat tattgcgatt gctatcggtt cgttttgctc actgattgtg gtggatctct
      901 cttggtatgt cagtttaatt ccatcaggct tgagctacta tattttgatg agggtgttaa
      961 aaagttccga agctttccgt aaagggacag tgctagaaca tcaataagat gacaagcggt
     1021 aaaatttatt aaaaatattt caaacttaag tgagcataag gcttattata aataaaacgt
     1081 tccgaaaaaa cattgaattt cattaaaaaa ttcctttatt tatcaaataa atgcgatttg
     1141 tttcggaacg ttttttaatg cttattttgc aacatacgga ttatcaatgg aaagcgttgc
     1201 tgtaaacatt gtgcctccta gtacaaaaaa accgcttggt ttccctaagc ggttctaatc
     1261 tataagaact attacactac aatctgcccc gtctctttta agtacttata gatacgccct
     1321 agcataatct gcgttggcgt tttgccaata tcctcttttg ttagcggtgc atcagtaatc
     1381 gccttggcgg actgtgcatc aatgtatttg tactcacttg tgatgattac aaagtttgtt
     1441 acttctccat cggtatcatc gcctgtaccg accacatatt tagcattgag cgagc
//
LOCUS       DANLXO010000207         1494 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.212, whole genome shotgun sequence.
ACCESSION   DANLXO010000207 DANLXO010000000
VERSION     DANLXO010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.212"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..1153
                     /locus_tag="PXD69_002686"
     CDS             <1..1153
                     /locus_tag="PXD69_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase/relaxase domain-containing protein"
                     /protein_id="HDL6284814.1"
                     /translation="YLLEQKIKLNTPKGPADGWFTEDGLWLVSKTAADNIRTYLLGQG
                     ISVPKDNPKLFDEMQSLGIVEESPSGGAIWSCRIQADSGWTPATTFTLLRVKPEVAWE
                     NINDRPAYFAGKVKVIEQITEEVNAEVQPPLVEETTKISLLPSKQSEAIIPSEETEIS
                     KAITSSDNATSAEVIINNENDLTSFVLDMFAPTETIEQNISVISSNKEQQIVMTTLTE
                     QEKVPPKKVKLEKSKKKNLQLTTLEPWNDMINPITGKEFVNWLKEGIATNKFAINKPS
                     AKLHIVDGNLFLVTPVIFEMYLQECGQPYDKETINNLQYDFQGLGLHSLKKTMTNGKP
                     DTINFWKCDVIGPRKTSSLTGYLIKNTHLLFGDKMLLNNHCLTLQEEDT"
     gene            1193..>1494
                     /locus_tag="PXD69_002687"
     CDS             1193..>1494
                     /locus_tag="PXD69_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase SAM-like domain-containing
                     protein"
                     /protein_id="HDL6284815.1"
                     /translation="MFFYRHYLRADTKRSYNNIIRIIKKRYPNLNANDVTTDMLIEWR
                     NQVVGNTIKAVTWNNYVRHLKALYNFAIAQGLLCMSSNPFNHLFIRESRRKKKTYS"
BASE COUNT          529 a          241 c          292 g          432 t
ORIGIN      
        1 ttatttactg gagcagaaaa tcaaattaaa tacgccaaaa ggaccagcag acggctggtt
       61 taccgaagat gggctgtggc tggtaagtaa aactgctgcc gataatatcc gaacttattt
      121 actgggacag gggatttccg tgcctaaaga taatccaaaa ctgtttgatg aaatgcaatc
      181 tcttggtatt gtggaagagt ctccttccgg cggtgcaatt tggagctgcc gtatccaagc
      241 cgattccggt tggacaccgg cgacaacatt tacgctatta cgagttaaac cggaggttgc
      301 ttgggagaat atcaacgata gaccggcgta ttttgccgga aaagtcaaag tgattgaaca
      361 gataactgaa gaggtcaatg cagaggttca gcctccatta gttgaagaaa ccactaaaat
      421 ttctctatta ccgagcaagc aatcggaggc tattattccg tctgaggaaa cggaaatatc
      481 gaaggcaatt acaagttcag acaatgcaac atctgcggaa gtaatcataa ataatgaaaa
      541 tgatttaact tcttttgtat tggatatgtt tgctcctaca gagacaattg agcaaaatat
      601 ttctgtcatt tcttcaaata aagagcagca aatcgtaatg acaacactta cggaacaaga
      661 aaaagttccg ccgaaaaaag ttaaattaga gaaaagtaag aaaaaaaatc ttcaattaac
      721 cactctagaa ccatggaatg atatgattaa tccaattact ggaaaagaat tcgtaaattg
      781 gttgaaggag gggatagcaa ccaataaatt tgcaattaac aaaccttctg caaaattaca
      841 tatagtagat ggtaatttat ttttagtcac accagttatt tttgaaatgt atttgcaaga
      901 atgtggccaa ccttatgata aggaaactat aaacaatctt cagtatgatt tccaggggct
      961 tggtcttcat tctcttaaaa aaaccatgac taatggtaag ccagatacaa taaatttttg
     1021 gaagtgtgac gtgattggtc ctagaaagac ttcctcttta acaggatatt tgataaaaaa
     1081 tactcatctc ttatttgggg ataaaatgtt actaaataac cactgtttaa ctttacagga
     1141 agaggacaca taatatggat tctaagattt ccttcgatat attattggaa cgattttttt
     1201 ctatcgtcat tatttacggg cggacacgaa acgaagttat aacaatatta ttcgaattat
     1261 caaaaagcgt tatccaaact taaatgcgaa tgatgtgact actgatatgt taattgaatg
     1321 gcgtaatcaa gttgttggta atacaattaa agctgtgacg tggaataatt atgtgagaca
     1381 cctaaaagca ttatataatt ttgcgatagc acaggggcta ctttgcatga gtagtaatcc
     1441 atttaatcat ttatttatta gagaatctag aagaaaaaag aaaacttatt ccag
//
LOCUS       DANLXO010000208         1487 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.213, whole genome shotgun sequence.
ACCESSION   DANLXO010000208 DANLXO010000000
VERSION     DANLXO010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.213"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..1107)
                     /locus_tag="PXD69_002688"
     CDS             complement(<1..1107)
                     /locus_tag="PXD69_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL6284816.1"
                     /translation="MASLNVSDVIKELDISKSYLYKLIDKENILIPRSETGRYFWDEN
                     TVKTIKRFLHIDGSQDKDDTDYLISKLGLKQSFINNRRYLGNKYSLSDFIRKTVDENC
                     KGVNIIIDIFSGTGAVSNTFKDKMLITNDLLYSNYISNYAWFGYEKYSDKKIIELIYE
                     YNQIKTKENNYMRENFADTFFSADDCSKIGYIREDIETKYKSNEINFKEYAILITSLL
                     YAMDKIANTVGHYDAYRKNVNFEKTLVLNVLLPEKNINSNNVCYNLDANELIKSIKGD
                     LLYLDPPYNSRQYCDAYHLLENVARWEKPKVYGVARKMDRTSLKSDYCMIAATKAFEE
                     LIENADAKYILLSYNNMSDKGNDRSNAKISDEDIM"
     gene            complement(1252..>1487)
                     /locus_tag="PXD69_002689"
     CDS             complement(1252..>1487)
                     /locus_tag="PXD69_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6284817.1"
                     /translation="LRHSHVAYLIEQGFSPVVIAERLGHESISITLNYAHLYLGRDKT
                     EKKESVIGAIKKHKRKIDKTIEQSHSMSNDMEL"
BASE COUNT          471 a          264 c          155 g          597 t
ORIGIN      
        1 cataatatct tcatccgata ttttcgcatt ggatctatca tttcccttgt ctgacatatt
       61 gttatatgaa agcaaaatat attttgcatc agcattttca ataagctcct caaatgcttt
      121 tgtagctgca atcatacaat aatcactttt aagcgaagtt ctatccatct ttcttgcaac
      181 accataaact ttaggttttt cccatcgtgc cacattttca agtaaatgat atgcatcaca
      241 atattgtctt gaattatatg gagggtctaa atacaataaa tctcctttaa tacttttaat
      301 taattcattt gcatctaagt tataacaaac attattagag ttaatatttt tttcaggtag
      361 taaaacattc aatactaaag ttttttcaaa gttgacattc tttctatatg catcgtaatg
      421 tccaaccgta tttgcaatct tatccattgc atataacaag gatgtaatca aaatcgcata
      481 ttccttaaaa tttatttcat tgcttttata ttttgtctca atatcttctc ttatatatcc
      541 tattttgctg caatcatcag cagaaaaaaa agtatctgca aaattctctc gcatatagtt
      601 attttctttt gtttttattt gattgtattc atatataagt tcaattattt ttttatctga
      661 gtatttctca tacccaaacc acgcatagtt ggaaatgtaa ttgctataca acaagtcatt
      721 tgtaataagc attttatcct taaaagtatt agagactgct ccagttccac taaatatgtc
      781 aatgataata tttacaccct tgcaattttc gtcaactgtc tttcttataa aatcagaaag
      841 ggaatattta tttcctaaat atcttctgtt atttataaaa gattgtttta atcctaattt
      901 agagattaaa taatctgtat catccttatc ttgtgaacca tctatatgca aaaatctttt
      961 tatagtttta actgtatttt catcccaaaa atatcttcct gtttcacttc tcggaatcaa
     1021 aatattttct ttatctatta atttatataa atatgactta gaaatgtcta attcttttat
     1081 tacatcagaa acattaagac ttgccataat ccccccttgc cacatttcaa tctattcagt
     1141 agacattata gcatatttta cctgtttttt ctatattttt ggctaaaaac atgatgctaa
     1201 ttgcttcaaa aaaatggaga gtatcaaatt tataatactc tccatgtatc tctatagctc
     1261 catatcgtta ctcatactat gactctgctc aattgtttta tctattttcc ttttatgttt
     1321 cttaattgct ccaataactg attccttttt ctctgtttta tccctaccaa gatataaatg
     1381 tgcatagttt aaggttattg agatactttc atgacctaat ctttctgcaa ttaccacagg
     1441 agaaaatcct tgctctatca aataagcaac atgagaatgt cttaaat
//
LOCUS       DANLXO010000209         1420 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.214, whole genome shotgun sequence.
ACCESSION   DANLXO010000209 DANLXO010000000
VERSION     DANLXO010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.214"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            267..1385
                     /locus_tag="PXD69_002690"
     CDS             267..1385
                     /locus_tag="PXD69_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL6284818.1"
                     /translation="MKKTLVALAVTAFAASASATTVYDAEGSKVDFDGSLRIVLDRTN
                     SKELDNHNVVKTKKDAHTGIRNTGSRFGVRVKHDLAQDFYALGRVEFRFNKNTSDDGF
                     GDLYTKRAYVGLGSKQYGELTFGRQVTIADDLSQSVDYNYGINPKGDYIQTDGNQVIR
                     YNYRGVENLHVSANYNFAQDRKDGKVLANKLQNAYGIGALYTVDNWDLRAAYGHTNYK
                     TATDSTKHRKDGVLGSVGYKFGDLKLSVDTGYSREKGLAVTDDNGVTTFYNGVKSNAF
                     YVSPNFEYQVVPASKVYGNYLYERVKSKSNGSTYAAGKEKTHGFLLGVDYQFHKQVVA
                     FVEGSYTRTKDYDKVTNGYEYSGKSTNKAIGVGMRVYW"
BASE COUNT          469 a          205 c          270 g          476 t
ORIGIN      
        1 tatgttatgc gcttcatttt ttctgttaaa aatgagtgga ttttctccaa atgaaataat
       61 gtaagtataa ccatttgatt ttaaaagaaa aaatgccgtc tttgttttgg ggtttgaact
      121 attgacattg agttttcttt ttgcaattat tctggcgaaa acaatgttag gcgttttgct
      181 gatacattgt atcttggata attactctta caccttaatg agggtaatta cttatcatat
      241 aacatataaa atctaaggtg aaaattatga aaaaaacatt agttgcatta gcagtaaccg
      301 cgttcgcagc gtcagcatca gcaaccaccg tttacgatgc agaaggttca aaagtagatt
      361 ttgatggttc tttacgtatt gttcttgata gaacaaattc taaagagcta gacaatcata
      421 atgttgttaa aactaaaaaa gatgcacaca caggaatccg taacactggt tcacgttttg
      481 gtgtaagagt aaaacatgat ttagctcaag atttctatgc attaggtcgt gttgagttcc
      541 gttttaacaa aaataccagt gatgatggtt ttggtgattt atatactaaa cgtgcttatg
      601 ttggtttagg tagtaagcaa tatggtgaat taacttttgg tcgtcaagta acgattgctg
      661 atgatttaag tcaatcagta gattacaact acggtattaa tccaaaaggt gattatattc
      721 aaaccgatgg taaccaagtt attcgttata actaccgtgg tgttgaaaac ttacatgtaa
      781 gtgcaaacta taactttgca caagatcgta aagatggtaa agtattagca aataaacttc
      841 aaaatgcata cggcattggt gcattataca ctgtagataa ctgggattta cgtgcagctt
      901 atggtcatac aaactacaaa acagctactg atagcactaa gcaccgtaaa gatggtgtat
      961 taggttctgt tggttataaa tttggtgact taaaattaag tgttgataca ggttattctc
     1021 gtgagaaggg tttagctgtt acggatgata atggtgtaac tacattctat aatggtgtta
     1081 aatcaaacgc tttctatgta tctccaaact ttgaatatca agtagtgcct gcatctaaag
     1141 tatatggtaa ctacttatat gagcgtgtga aatctaaatc aaatggttct acatatgctg
     1201 ctggtaaaga aaaaactcat ggtttcttac ttggtgttga ttaccaattc cataaacaag
     1261 tagttgcttt tgttgagggt tcttatactc gtactaaaga ctatgataaa gtaactaatg
     1321 gttatgaata ctcaggcaaa tcaactaaca aagctatcgg tgttggtatg cgtgtatact
     1381 ggtaatcaat tgattttcta aattgataaa cccctaacaa
//
LOCUS       DANLXO010000210         1386 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.216, whole genome shotgun sequence.
ACCESSION   DANLXO010000210 DANLXO010000000
VERSION     DANLXO010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.216"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(132..974)
                     /locus_tag="PXD69_002691"
     CDS             complement(132..974)
                     /locus_tag="PXD69_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HDL6284819.1"
                     /translation="MKVGLVLEGGGLRGIFTAGVLDVFLDEHIHIDGAIGVSAGALFG
                     VNLPSKQKGRALRYNKKYAKDKRYMGLHSLLTTGNIVNRDFAYYELPSKLDPFDQQAF
                     EDSGMDFWVTVTNVETGEPEYIKIDNVFEQMEAFRATSSMPIVSKIVEIEGKKYLDGG
                     VSDSIPVQKFIEMGYDKIIVVLTRPLEYRKKPSSMWLFKRFYKKYPKLVQRWENRYAE
                     YNQAVEQIIQLNEKQQIFVIRPSRTVKISRLETDVNKIQAMYDLGVEDAKNALAGLRA
                     YLAK"
     gene            1034..1351
                     /locus_tag="PXD69_002692"
     CDS             1034..1351
                     /locus_tag="PXD69_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL6284820.1"
                     /translation="MADAEFMDFLLDQLSPISGLRSKKMFGEYCLFFDNKIVAIISKD
                     YRIFVKANPQTLPLFLAENAEQFHYFAKGKVQKMHYWSIPELAIEEADELVKWIRLGL
                     QAV"
BASE COUNT          406 a          286 c          251 g          443 t
ORIGIN      
        1 agtgcccgcc cataaattat ataaaatgtt tggacaggca caggaccggt ccctataaaa
       61 tttgtttgga agtgtttccg tctagacgtc tataatatat tttttgaacg ttttaggcaa
      121 atagaatttg tttatttggc taaatatgcc cttaaaccag ccaacgcatt tttggcatct
      181 tctaccccta aatcgtacat tgcttgtatt ttatttacat ccgtttcaag gcgactgatt
      241 ttgactgttc tgcttggacg aatcacaaaa atctgttgtt tttcattgag ttgaataatc
      301 tgctcaacgg cttgattata ttccgcatag cggttttccc agcgttgcac taatttcgga
      361 tattttttat aaaaacgttt aaacagccac atcgagcttg gtttcttacg gtattcaagt
      421 gggcgagtaa gcaccacgat aattttgtca tatcccattt caataaattt ctgcaccgga
      481 atactgtctg acacaccacc gtctaaatat tttttaccct caatttcgac tattttggat
      541 acaatcggca ttgaggaagt agctcgaaag gcttccattt gctcgaacac attgtcaatt
      601 ttgatgtatt cgggctcacc ggtttcgaca ttggttacag taacccaaaa gtccataccg
      661 gaatcctcaa aggcttgttg gtcaaacgga tccagtttgg aagggagttc atagtaagca
      721 aaatcccgat taacgatatt gccggtggta agcaagctgt gtaaccccat ataccgctta
      781 tctttagcgt attttttgtt gtatcgcaac gccctacctt tttgttttga aggcaaattc
      841 acgccaaata acgcaccggc tgaaacaccg attgctccat ctatatgaat atgttcatct
      901 aaaaatacat ctaacacgcc ggcagtaaaa atacctcgca aaccaccgcc ttccagcact
      961 aatccaactt tcatatcatt ctccctgtaa tttgtgtatt ataacccgaa ttatcttgct
     1021 aggagaaatc acaatggctg atgcagaatt tatggatttc ctgttagatc aactaagccc
     1081 gatttccggt ttgcgttcga aaaaaatgtt tggtgaatat tgcttgtttt ttgataataa
     1141 aattgtcgct attatcagca aagattatcg catttttgtc aaagctaatc cgcaaacctt
     1201 gccgttattc ttagctgaaa atgccgaaca atttcactat tttgctaaag gaaaagtgca
     1261 aaaaatgcac tactggagca ttccggaatt agcgattgaa gaagccgatg aactggtcaa
     1321 atggattcgg ctaggcttac aagcggtgta atttagcgaa aattttgtaa aaaaacgcta
     1381 aaatat
//
LOCUS       DANLXO010000211         1335 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.217, whole genome shotgun sequence.
ACCESSION   DANLXO010000211 DANLXO010000000
VERSION     DANLXO010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.217"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(189..530)
                     /locus_tag="PXD69_002693"
     CDS             complement(189..530)
                     /locus_tag="PXD69_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HDL6284821.1"
                     /translation="MKAILCQRAKQLRTNMTEAEKVLWQALRAKRFLAIKFKRQQVIG
                     NYIVDFVCFSAKLVIELDGSQHLDQQNYDNLRTHFLNGQGFRVLRFWNNQIHSDLEAV
                     LDTIFYEITRG"
     gene            complement(678..1310)
                     /locus_tag="PXD69_002694"
     CDS             complement(678..1310)
                     /locus_tag="PXD69_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 family protein"
                     /protein_id="HDL6284822.1"
                     /translation="MKNLEQLLDKQSAWLILRDWFTQAKNHYEILASYPEDAGSALVG
                     MQLSTRSPLGAMVYETGGVFIDHGWLRILGSGNEKLPRGLFDWNFGKTFKQSGEQPSH
                     LLVADDAIGGYFAINAGGIGSDLGKVYYYHPKAKKWENTQLGYSEFLGWALAGDLNHF
                     YQDLRWENWQTDVEKLQGHQVLDLTSKIAVPIERHYQGEFAPENMGYSVA"
BASE COUNT          417 a          270 c          216 g          432 t
ORIGIN      
        1 tctcccacaa ggggagaggg ttattctttc aaaaattcaa aacaactaaa aaattagcat
       61 tctccttttg taggagaaaa tgttgttctt tcaaaattct aaaataaccg caaaattaac
      121 tctcgcccct tgtgggagag agacagataa atcattcgtt cagaatgatt tatcagagag
      181 aggggaaatt accctctcgt aatttcataa aaaattgtat ctaaaacagc ctctagatcg
      241 ctatgaattt gattattcca aaatcttaaa accctgaacc cctgaccgtt taaaaaatga
      301 gttcgtagat tatcatagtt ttgttgatct aaatgttgtg aaccatctaa ttcaataact
      361 aatttcgctg aaaagcaaac aaaatcgaca atatagttac ctataacttg ttgccgttta
      421 aattttatcg ctaaaaatcg ttttgctctt aatgcttgcc aaagaacctt ctctgcttct
      481 gtcatattag tccgaagctg tttagctctt tggcataaaa ttgctttcat tttttattcc
      541 tcttttttaa tttagtataa aaggaataaa aaatataatt tgagcgattt ttgtgatcta
      601 aatcgaaaat cagaaaattt ctttcgttct aaaaaaataa gctaaacagc ctatatttca
      661 gcctctctta caaacactta agccaccgaa tatcccatat tttcaggggc aaattcgcct
      721 tggtagtggc gttcaatcgg aacggcgatt ttacttgtaa gatccagcac ttgatgccct
      781 tgtaatttct ctacatcggt ttgccagttt tcccaacgca aatcctgata aaaatggttt
      841 aaatctccgg ctaatgccca gcctagaaat tctgaataac ctaattgggt gttttcccat
      901 tttttagctt ttggatgata ataataaact ttgccaagat ctgagccgat tccgccggca
      961 ttaatggcaa aatagccacc gattgcatca tccgctacca gcaagtggct tggttgttcg
     1021 ccagattgtt taaaagtttt gccaaagttc caatcaaata agcctcgagg caatttttcg
     1081 ttgcctgagc ctaaaatgcg taaccaaccg tggtcaataa atacgccacc ggtttcatac
     1141 accattgccc ctagcggtga gcgagtagaa agttgcatac caaccaatgc actgccggca
     1201 tcttcagggt aactcgctaa aatttcgtaa tgatttttgg cttgggtaaa ccagtctctt
     1261 aaaattaacc aagccgattg tttatctaat aattgttcta aatttttcat ttgcaaaatt
     1321 tccttagaat ttgac
//
LOCUS       DANLXO010000212         1293 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.218, whole genome shotgun sequence.
ACCESSION   DANLXO010000212 DANLXO010000000
VERSION     DANLXO010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.218"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..707)
                     /locus_tag="PXD69_002695"
     CDS             complement(<1..707)
                     /locus_tag="PXD69_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL6284823.1"
                     /translation="MSIYRRKANGPWWVDITTPNGKRIKRSTRTLVKREAQQYHDKLK
                     QEMWAEDKLEEKRKYIFEDALLHYVRAAEELKDKATKKRHAEYWLSKFAGRELSSLTA
                     QEIILNIPKKNANTKKPLSHSTQNKYVKSLSRVLNIAHKLGMLDAVPHIPKKKEPPIR
                     VRWITKEQAKQLIDKLSSDWMKSICKFALMTGARRTEILTMTWDKIDLVRKVAIVTND
                     VAKSGKARSLLLNQEAI"
     gene            complement(611..934)
                     /locus_tag="PXD69_002696"
     CDS             complement(611..934)
                     /locus_tag="PXD69_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL6284824.1"
                     /translation="MEHLTINQVAKELNCHPNTVRQHLADWGFFKMVGSEVWRINRED
                     LERAKKRAGIDPIRKRSDNDRGLSLSVEENEKCRSTDEKQTVRGGLISQPQTARELRE
                     ALARL"
     gene            complement(1015..1182)
                     /locus_tag="PXD69_002697"
     CDS             complement(1015..1182)
                     /locus_tag="PXD69_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL6284825.1"
                     /translation="MQFTYGSICSGIEATSIAWHGLGKPLWFSEIEPFPCAVLAHRFP
                     NVPNGNGMAVP"
BASE COUNT          316 a          295 c          231 g          451 t
ORIGIN      
        1 ttaattgcct cttgattcag taatagcgat cgtgccttac ctgatttagc gacatcatta
       61 gtcacgattg ctacctttct tacaagatct atcttatccc aagtcattgt caaaatttct
      121 gtccgtctgg ctccagtcat caaagcaaac ttacagatag atttcatcca gtctgaactt
      181 aatttatcta ttagctgttt tgcttgttct ttggtgatcc agcgtacacg aattggcggc
      241 tctttctttt tcggtatgtg tgggactgca tccaacatac caagtttatg agcgatattt
      301 aatactctcg ataaagattt cacatactta ttttgcgtac tatgagatag aggctttttc
      361 gtatttgcat tctttttcgg gatatttagg ataatctcct gagctgttaa agagctgagt
      421 tcacgaccgg caaatttgga taaccagtat tcagcatgtc gcttttttgt ggctttatct
      481 tttaattctt cggccgcacg aacgtaatgg agcaaagcat cttcaaagat atattttctc
      541 ttttcctcga gtttatcctc tgcccacatt tcttgcttga gtttatcgtg atactgctga
      601 gcttcacgtt ttacaagcgt gcgagtgctt ctcttaattc tcttgccgtt tggggttgtg
      661 atatcaaccc accacggacc gtttgctttt cgtctgtaga tcgacatttt tcattctcct
      721 cgaccgacag agataaccct cggtcattat cagatcgttt tcttattggg tcaataccgg
      781 ctctcttttt tgctctttcc aaatcttctc ggttgatccg ccaaacttcc gagcctacca
      841 ttttaaaaaa tccccaatcc gccaaatgtt ggcggactgt atttggatgg caatttaatt
      901 cttttgccac ttgattaata gtaagatgtt ccattcatta ctttctccaa aataaatccc
      961 tctaaacgag ggattgtact aaataatcgt taagtctttg ccttatccac tgcatcaagg
     1021 cacagccata ccgtttccat ttggcacatt ggggaaacgg tgagctaata ccgcacaggg
     1081 gaatggctca atttcagaga accacaaagg cttacctaaa ccgtgccacg ctatacttgt
     1141 agcttcgata ccgctacaaa ttgagccgta ggtgaattgc attttttacc tatcctatcg
     1201 aaatactcaa attcccaata cggacaacat tttcttcgtt ggcttctagg atttctctca
     1261 acttagcata ggttttgggg catcttattt gac
//
LOCUS       DANLXO010000213         1264 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.219, whole genome shotgun sequence.
ACCESSION   DANLXO010000213 DANLXO010000000
VERSION     DANLXO010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.219"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            21..1163
                     /gene="tuf"
                     /locus_tag="PXD69_002698"
     CDS             21..1163
                     /gene="tuf"
                     /locus_tag="PXD69_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDL6284826.1"
                     /translation="MGTIGHVDHGKTTLTAAITTVLAKHFGGAARAFDQIDNAPEEKA
                     RGITINTSHVEYDTATRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQT
                     REHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGS
                     ALQALNGVAEWEEKILELANHLDTYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRV
                     ERGIIRTGDEVEIVGIKDTAKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERG
                     QVLAKPGSITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGV
                     EMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIK"
BASE COUNT          400 a          263 c          293 g          308 t
ORIGIN      
        1 gtacaaaacc gcacgttaat gtgggtacaa tcggccacgt tgaccatggt aaaacaactt
       61 taacagcagc aatcactacc gtattagcaa aacacttcgg tggtgcagct cgtgcatttg
      121 accaaatcga taacgcgcca gaagaaaaag cgcgtggtat caccatcaac acttcacacg
      181 ttgagtacga tacagcaact cgtcactacg cacacgttga ctgcccggga cacgcggact
      241 atgttaaaaa catgattacc ggtgcggcac aaatggacgg cgctatctta gtagtagcag
      301 caactgacgg tccaatgcca caaactcgtg agcacatctt attaggtcgc caagtaggtg
      361 taccatacat catcgtattc ttaaacaaat gcgacatggt agatgacgaa gagttattag
      421 aattagttga gatggaagtg cgtgaacttc tttcacaata cgacttccca ggtgatgaca
      481 ctccaatcgt acgtggttca gcgttacaag cgttaaacgg cgtagcagag tgggaagaga
      541 aaatccttga attagcaaac cacttagaca catacattcc agagcctgag cgtgcgattg
      601 ataaaccatt cttattacca atcgaagacg tattctcaat ttcaggtcgt ggtacagtag
      661 taacaggtcg tgttgagcgt ggtatcatcc gcactggtga tgaagttgaa atcgtaggta
      721 tcaaagatac agcgaaaaca accgtaacag gtgttgagat gttccgtaaa ttattagacg
      781 aaggtcgtgc gggtgagaac gtaggtgcat tattacgtgg tactaaacgt gaagaaatcg
      841 aacgtggtca agtattagcg aaaccgggtt caatcactcc acacacagac ttcgaatcag
      901 aagtttacgt attatcaaaa gaagaaggtg gtcgtcacac tccattcttc aaaggttacc
      961 gtccacagtt ctacttccgt acaacggacg taacaggtac aatcgaatta ccggaaggtg
     1021 tagagatggt aatgccgggc gacaacatca aaatgactgt tagcctaatt cacccaatcg
     1081 cgatggacga aggtttacgt tttgcgattc gtgaaggtgg tcgtacagta ggtgcgggcg
     1141 ttgtagctaa aatcatcaaa taattaagat tgtttgataa attgaaaagc taaataaaaa
     1201 ctagaaagag gcatatcgaa aggtatgcct cttttgcttt tatgccgatt aagctagcca
     1261 tatc
//
LOCUS       DANLXO010000214         1262 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.220, whole genome shotgun sequence.
ACCESSION   DANLXO010000214 DANLXO010000000
VERSION     DANLXO010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.220"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..1023
                     /locus_tag="PXD69_002699"
     CDS             <1..1023
                     /locus_tag="PXD69_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284827.1"
                     /translation="SGSGGSSSTPNHPKPVLVPKTQNNLQAQNVPQAQNASQAQNAPQ
                     AQNAPQAQNAPQVENAPQAQNAPQAQNAPQVENAPQAEVTPPVPQPQSQKIDGSFDKI
                     GSVKLNKEAQTLELSRFTLVDKLGTPPKFDKVSGKKIIEEKDFLVLNLSDINAEQLSG
                     DFLIRRSDDLFYGYYHDTNGKNLVDAADKFSQYFVVYDEKRVNDNISDKLTATYRKKE
                     GFVYGSNPHTKEFAARISKLGDVEIKFENGQAQGSIKDEKDGNAEIFTIKGDTKQLEI
                     TPTESNRIIIAILDQNQKSYTPGMEKAIMETKFIDSKAGNSDQKYLIGEAKSDNWQAI
                     MVSEKK"
BASE COUNT          452 a          246 c          230 g          334 t
ORIGIN      
        1 agcggtagcg gaggttcgtc ttcaacaccg aatcacccca aaccagtact agtaccaaaa
       61 acacaaaata atcttcaagc acaaaatgtt cctcaggcac aaaatgcctc tcaggcacaa
      121 aatgcccctc aggcacaaaa tgctcctcag gcacaaaatg ctcctcaggt ggaaaatgct
      181 cctcaggcac aaaatgctcc tcaggcacaa aatgctcctc aggtagaaaa tgctcctcaa
      241 gcagaggtta ctccgcctgt accacagcca caatcacaaa aaattgacgg ttcttttgat
      301 aaaattggtt cagtaaaact caataaagag gctcaaactc ttgagcttag tagattcact
      361 ttggtggata aattaggcac accaccgaag tttgataaag taagcggtaa aaaaattatt
      421 gaagaaaaag attttctcgt attaaatttg tctgatatta atgctgaaca actctctggc
      481 gattttctta ttcgccgtag cgatgatcta ttctatggct actatcacga tacaaatggc
      541 aaaaatcttg tcgatgctgc cgataaattc agtcaatatt ttgtcgtgta tgatgagaaa
      601 cgggtaaatg ataatatctc tgataaatta acagcaactt accgtaaaaa agaaggcttt
      661 gtatatggtt caaatccaca tactaaagaa tttgccgcac ggatcagcaa attgggggat
      721 gtagaaatta aatttgaaaa tggtcaagct caaggaagta taaaagacga aaaagatgga
      781 aatgctgaga tctttactat taaaggtgat acaaaacagt tagagattac cccaacggaa
      841 agtaaccgaa tcattatagc aattttagac caaaatcaaa aaagctatac tccaggaatg
      901 gaaaaagcaa ttatggaaac taagtttatt gattcaaagg ctggtaattc cgaccaaaaa
      961 tacttaatcg gtgaagcaaa aagcgataac tggcaagcaa taatggttag cgagaaaaaa
     1021 taaagttatc ttttgctaaa aactgaaata aaaaggctga gtccgggtaa tatcggcctc
     1081 agtcttttaa attgtagaaa atcatctgta gaagatcaaa cctaatctga cagtcccccg
     1141 ttttaaatta ccgtgtctgt cagattaatt tgagcttaaa ttcttttcca cccaaatccg
     1201 ttttccatca agtaaggttg ccatcggtgt tctgccatag cacatttttc cttgatgtgt
     1261 tc
//
LOCUS       DANLXO010000215         1257 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.221, whole genome shotgun sequence.
ACCESSION   DANLXO010000215 DANLXO010000000
VERSION     DANLXO010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.221"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..921
                     /locus_tag="PXD69_002700"
     CDS             <1..921
                     /locus_tag="PXD69_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL6284828.1"
                     /translation="RMIKLDMIPKYYFKEIIDVLYTETFSRDNNLRADAPLETISEAF
                     KLDISKVYVALSKDLGITIKSPEQAATYVNDERYRRFNTLIDKKFNDSVLIELLNCFE
                     KRDDKRIEELVTDEAAIPTIFEYILGIIWYKVSERQGNILDFMKLSLEANLLPKTHAA
                     GGYADIIYEYEACTSYPKHSLLLEATLADGNNQRRMEMEPVSRHLGDYRIRFNNPFDY
                     SLFVSTYLDKNVISDFRYRKIIPYTRDEETITGMKIISMDTDSLKKIIENKVKYKYLY
                     EIFDKYHEMPLETVDWHDGMIKEATGEYKS"
     gene            983..>1257
                     /locus_tag="PXD69_002701"
     CDS             983..>1257
                     /locus_tag="PXD69_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HDL6284829.1"
                     /translation="MKNRIEHPKIFISYAWGSQEHDEKVIALATNLKGDGIDVIFDKW
                     QLKEGNDTFKFMEKSVLDESITNVLILIDPIYAKKANERAGGVGTET"
BASE COUNT          474 a          152 c          254 g          377 t
ORIGIN      
        1 cgtatgatta agttggatat gattccaaag tattatttta aagaaattat tgatgttctg
       61 tatacagaaa cttttagtag agataataat ctcagggctg atgccccact tgaaactata
      121 tcagaagcat tcaagttaga tattagcaaa gtatatgtag ctttaagtaa agatttagga
      181 attacaatta agagtccgga acaagctgca acttatgtaa atgatgaacg atacagaaga
      241 tttaatactt tgatcgataa gaaatttaac gattctgtgc ttatagagtt actaaattgt
      301 tttgagaaac gtgatgataa aaggattgaa gaacttgtta cagatgaggc tgcaatacct
      361 actatttttg aatatatttt gggaattata tggtacaaag tgagcgaaag acaaggaaat
      421 attttggatt tcatgaagtt atcattagaa gccaatttat tgccgaagac ccacgcagct
      481 ggaggttacg cagacattat atatgaatat gaagcgtgca cctcttatcc gaaacattca
      541 ttattgcttg aagcaaccct tgcagatgga aataatcaaa gaagaatgga aatggagcct
      601 gtttcaagac atttaggcga ttataggatt agatttaata atccgtttga ttacagccta
      661 tttgttagca catacttaga taaaaatgta atctcagatt ttagatatag aaagataatt
      721 ccatacacca gagatgaaga aaccattaca ggaatgaaga ttatttcaat ggacacagat
      781 tctcttaaga aaataattga gaataaggtt aagtacaagt atctgtatga aatatttgat
      841 aaataccatg aaatgccatt agagactgta gattggcatg atgggatgat aaaagaggct
      901 actggagagt ataagtcata gtgattataa gatagtgaga aagaatactt attttgaaag
      961 gaatacatgg gaattgatac agatgaagaa tagaattgaa catcctaaga tttttatttc
     1021 atatgcttgg ggatcacagg aacatgatga gaaggttatt gctttagcta caaatcttaa
     1081 aggagatggt atagatgtca tttttgataa atggcagcta aaagaaggca atgatacctt
     1141 taaattcatg gaaaaaagtg ttttagatga gagtattacc aatgtactga ttcttataga
     1201 tcctatttat gcaaagaaag caaatgaaag agccggtggc gtaggtacag aaacaca
//
LOCUS       DANLXO010000216         1240 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.222, whole genome shotgun sequence.
ACCESSION   DANLXO010000216 DANLXO010000000
VERSION     DANLXO010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.222"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            141..>1240
                     /locus_tag="PXD69_002702"
     CDS             141..>1240
                     /locus_tag="PXD69_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL6284830.1"
                     /translation="MLNWAGKSTAYQTLQTPTSKTLTPCEEESVDFENTQNIFIEGEN
                     LDVLKALQKSYFNSVKMIYIDPPYNTGNDFIYNDSFADTKADYAEKVGDVDEHGKLKR
                     AFVRNSKENGHYHSNWLNMMLPRLHLAKNLLRDDGVIFISIDDNEQAQLKLLCDEVFG
                     EENFVAILSVENNPKGRKNSKFISVSNDFCIIYAKNKEMGKFVENIPKNAKDMCQDEN
                     GHYVHASGKRVLVGENKFNQPVTDFTSDKHYSVYFNKLDDDIILKFEDSLDDKDLNLI
                     NQGYVRYISFFDDEFVENTYTRFKFLELFEDESLEFTEDKIYEKNFSDTIRMKSILNN
                     KNYKAVSAGNLTNYTLDVKTTSAGTLLKELFET"
BASE COUNT          450 a          190 c          222 g          378 t
ORIGIN      
        1 ttgccaactt ttcgcttaaa gatcaacaac tttctcaatt aaaatccctt ttacctgaaa
       61 ttttcaccga aggtaaaatc gacttcgaca aattccaaca acttttttcg gataattttt
      121 ccaccgaacc tgaccgctat atgctcaact gggcaggaaa atcaacagcc tatcaaacct
      181 tacaaacccc aaccagcaaa acgctcactc cttgcgagga agagagtgtg gattttgaaa
      241 atacgcagaa tatctttatt gagggtgaaa atttagatgt attaaaagcc ctgcaaaaat
      301 cctacttcaa ttcggtcaaa atgatttata tcgatccgcc atacaataca ggcaacgatt
      361 ttatttataa cgacagtttt gccgatacca aagcagatta tgcggagaaa gtgggcgacg
      421 ttgatgaaca cggcaaattg aaacgagcct ttgttcgtaa cagcaaagaa aatgggcatt
      481 atcacagtaa ctggctgaat atgatgttgc ctcgtttgca tctcgcaaaa aatttactgc
      541 gtgatgacgg ggtgattttt atttcaattg atgataacga acaggcacag ctgaaattgc
      601 tttgtgatga agtgtttggg gaggagaatt ttgttgccat attatcagtt gaaaataatc
      661 cgaaaggtag aaagaattct aaatttattt ctgtaagtaa tgatttttgt attatttatg
      721 ctaaaaataa agaaatgggg aaatttgttg aaaatattcc taaaaatgct aaggatatgt
      781 gtcaagatga aaatggacat tatgttcacg caagtggaaa acgagtatta gttggggaaa
      841 acaaatttaa tcagcctgta acagatttta cctcagataa acactattca gtttatttta
      901 ataaattaga tgatgatatt attttaaagt tcgaagattc tcttgatgat aaggatttaa
      961 atttaattaa tcaagggtat gtaagatata tttcgttttt tgatgatgaa tttgtagaaa
     1021 acacatacac aagatttaaa ttccttgagt tatttgaaga cgaatcttta gaattcacag
     1081 aagataaaat ttatgaaaaa aactttagtg atactataag aatgaaaagt atactgaata
     1141 ataaaaacta taaagcagtt tcggctggta atttaaccaa ttacacccta gatgttaaga
     1201 caacttcggc aggaacactg ctaaaagaat tattcgaaac
//
LOCUS       DANLXO010000217         1203 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.223, whole genome shotgun sequence.
ACCESSION   DANLXO010000217 DANLXO010000000
VERSION     DANLXO010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.223"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            24..914
                     /locus_tag="PXD69_002703"
     CDS             24..914
                     /locus_tag="PXD69_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6284831.1"
                     /translation="MDKLNAISLFCKVIETQSFTQAAQQAQISLPMASKLVAQLEEHL
                     NVRLLQRTTRKITPTEAGLLYYQQCLPILNELKEADASVSNINSTLQGKITMSVPMDF
                     GSRFIAPYLGKFMEDYPNLALHIEFSDRRVDVIAEGFDLVLRIGSLADSSIVAKKIAD
                     SHLVLVASPDYLARFGEPKGLEALVERDCLLYEYHPQWQFSQQGQKMQIKPQGKIYSN
                     NGYALVQMAKAGLGIINIPKFLIKHELKNGELIPIMPFLTQEPLQISLLYPNRRYLSP
                     KVRILIDFFTQLMQEQKEYI"
     gene            complement(964..1164)
                     /locus_tag="PXD69_002704"
     CDS             complement(964..1164)
                     /locus_tag="PXD69_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDL6284832.1"
                     /translation="MKSEGGLCKNIIIGILGSSLGRWVFGDVLGIGSAYSAGDFNIVG
                     IFFGVLGAALLIFILRKLSIIN"
BASE COUNT          422 a          246 c          201 g          334 t
ORIGIN      
        1 ttacaatata aagaagagag aaaatggata aactaaacgc aatcagttta ttttgtaaag
       61 taattgaaac ccaaagtttc actcaagcag cacaacaagc tcaaatttcg ttacccatgg
      121 caagtaaatt ggtggctcag ttagaagaac atctcaatgt gcgtttacta caacgaacca
      181 ctcgaaaaat tacgccaact gaggcagggt tgctctacta tcagcaatgc ttgcctattt
      241 taaatgaact aaaagaggcc gatgccagcg taagtaatat taactcaacg ctacaaggga
      301 aaataacaat gtctgtacca atggattttg gctctcgctt cattgcccct taccttggga
      361 aatttatgga agattaccct aatttagccc ttcatattga atttagtgac cgtcgggtag
      421 atgtgattgc agaaggcttt gatttggtgc tgcgtattgg tagccttgca gatagttcca
      481 ttgtagcgaa aaaaattgca gattcccatt tggttttagt tgcttctcca gattatttag
      541 ctcgatttgg cgaacctaaa ggcttagaag cattagtgga acgagactgc ctactctatg
      601 aataccatcc tcaatggcaa ttttctcaac aaggacaaaa aatgcaaatt aaaccacaag
      661 gtaaaattta cagtaacaat ggttatgcgt tagtacaaat ggcaaaagct ggtttgggca
      721 tcattaacat tccaaagttt ttaataaaac acgagctaaa aaacggagag ttgattccta
      781 ttatgccttt tttgacacag gaacctttac aaatcagctt actctatcca aaccgtcgtt
      841 atctctctcc taaagtgcga atcctaattg attttttcac acaactgatg caagagcaaa
      901 aagagtatat ttaacaaaaa agaagcagtt ataaaacaac tgcttccttt ctgaaatacg
      961 aaattagtta attatgctta attttctcaa aatgaaaatc aaaagagctg cccctaatac
     1021 accaaaaaag ataccgacta tattaaagtc tccggcacta taagcggaac caatacctaa
     1081 tacatcacca aatacccagc gtccaagtga cgaacccaaa ataccaataa taatattttt
     1141 gcaaagtccg ccttcacttt tcattacagc cgaagctatc caaccaatta tagcgccaac
     1201 aat
//
LOCUS       DANLXO010000218         1195 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.224, whole genome shotgun sequence.
ACCESSION   DANLXO010000218 DANLXO010000000
VERSION     DANLXO010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.224"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..259
                     /locus_tag="PXD69_002705"
     CDS             <1..259
                     /locus_tag="PXD69_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6284833.1"
                     /translation="TYRSYDALDVSEFHHERINHSELFAEKQNHINGIENFWNQAKRV
                     LRKYNGINRKNFPLFLKECEFRFNFGTPKEQLKTLRKWCEI"
     gene            265..603
                     /locus_tag="PXD69_002706"
     CDS             265..603
                     /locus_tag="PXD69_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284834.1"
                     /translation="MYYSPKDYLEEYNDLGTIRYKFQEENLYGFLRDGATLVANGIVN
                     EPSVDCFSQEIAQFTGCHIFSSLYIAFNTQRSFKSHWDSRDIFAVQMQGKKRWIIHTP
                     TFKKTIVYAS"
     gene            593..>1195
                     /locus_tag="PXD69_002707"
     CDS             593..>1195
                     /locus_tag="PXD69_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HDL6284835.1"
                     /translation="MHRSKDMPEYAPNLDDVYMDIVLEAGDVLYLPRGWWHDPIPVGE
                     ETVHLAVGIFPAYTHNYLTWVSQNMVEKEIARASLSHYESDKELIAQLAEQTAEYIKD
                     KENYHKFIENFYDQKRVEKPLNLETLGNYQYDSISENQKISFKAKNHYFGYENKIISN
                     GYGISLDEEFGNVIKFLKQGQEVSLNDILEKISEDKRDKVS"
BASE COUNT          417 a          169 c          224 g          385 t
ORIGIN      
        1 tacctatcgt agctatgatg cccttgatgt gagcgaattt catcacgagc gaatcaacca
       61 ttccgaactg tttgcggaga aacaaaacca tatcaatggc attgaaaatt tttggaatca
      121 agcgaagcga gtactccgaa aatataacgg aattaaccga aaaaatttcc ctttattctt
      181 gaaggaatgt gaatttcggt ttaactttgg tacaccaaaa gaacagctca aaacgttgcg
      241 aaaatggtgt gagatttagg gctaatctac tacagcccca aagattattt agaagaatat
      301 aatgatctag gtactattcg ttataaattt caagaagaaa atttatatgg ttttttaaga
      361 gatggggcaa cattagtcgc aaatggtatt gtaaatgaac caagtgttga ttgcttctct
      421 caagagatag ctcaatttac aggctgtcat attttttcaa gtttatatat tgcgtttaat
      481 actcaaagat cttttaaaag ccattgggat agtcgtgata tttttgcagt tcaaatgcag
      541 ggtaaaaagc gttggattat tcacactcca acatttaaaa aaaccattgt ttatgcatcg
      601 tagtaaagat atgcctgaat atgctcctaa tcttgatgat gtatatatgg atattgtatt
      661 agaagctgga gatgttcttt atttacctcg tggctggtgg cacgatccta ttcctgttgg
      721 agaagaaact gtgcatttag ctgtaggcat ttttcctgct tatactcata actatctgac
      781 ttgggtatct caaaatatgg ttgagaaaga aattgcccga gcttctttat cgcattatga
      841 gtcagataaa gagttgatag cacagttggc agaacaaaca gcagaatata ttaaagataa
      901 agagaattat cataaattta tagagaattt ttatgatcag aagcgggttg aaaagccact
      961 taatttggaa actttaggaa attatcaata tgattctatt tcggaaaatc aaaaaatttc
     1021 atttaaagcc aaaaatcact actttggtta tgaaaataag ataatttcaa atggatatgg
     1081 tatttctctt gatgaagagt ttggaaatgt tattaaattt cttaaacagg gtcaggaagt
     1141 ttcattaaat gatattttag aaaaaatatc agaagataaa cgagataaag tttct
//
LOCUS       DANLXO010000219         1183 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.225, whole genome shotgun sequence.
ACCESSION   DANLXO010000219 DANLXO010000000
VERSION     DANLXO010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.225"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>1183
                     /locus_tag="PXD69_002708"
     CDS             <1..>1183
                     /locus_tag="PXD69_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HDL6284836.1"
                     /translation="FTAEWTSERAYLLVGVNGTYETTDWLAFHSVKLEKGNVATDWTP
                     APEDVDSAVSAVSAKIDTIQETLANADSALSSRIDAVTASVGSNLAKITQVSNAVAGV
                     DGKLSATHTIKTETIAGGRKAIAGIAFGATADNRNAESSVIVMADKFEVVKNAQDGTP
                     VRLFGVVENKVAINGNLIATGSISGDHINANSVRTAVLTAGAIKTEHLAAGQISADKL
                     AIGLGGNLLVNPIFATPDLSIAPFGWNYWRGEVGDRLNIDTRTIFNRNEQDNYGLKNG
                     GLPNELVFSMRYSTTKETSDTGRIGWLSQDINVVPNKKYIASVWLACHRGQAKLVIEN
                     IEKPGGAYLGRIGNSEVITGYSAHQGEFKNMKRVKVVFTAPTSGCIRFALRLDNIQGK
                     A"
BASE COUNT          350 a          218 c          295 g          320 t
ORIGIN      
        1 cctttactgc cgaatggaca agtgagcgag cctatctgct tgttggtgta aatggtactt
       61 atgagaccac agattggtta gcgtttcaca gcgtcaaact tgaaaaaggc aacgtagcca
      121 cagactggac gccagcacct gaagatgtgg acagtgcggt tagtgcagtt tcggctaaaa
      181 ttgatactat tcaggagact ttagcgaatg ccgactctgc attaagctct cgtattgatg
      241 ccgttactgc ttctgttggc tcaaacttgg caaaaattac tcaagtgagt aatgctgtag
      301 ccggtgtgga cggcaaatta tctgctaccc ataccatcaa aaccgaaacc attgccggtg
      361 gacgcaaagc gattgccggt attgcatttg gtgcaacggc agataaccgt aatgcggaat
      421 cttctgtgat tgtgatggca gataaatttg aggtcgtgaa aaacgcccaa gacggcacgc
      481 cagtaagact atttggcgtg gtagaaaata aagtagcgat taatgggaat ttaatcgcaa
      541 caggctcgat ttcaggagac cacatcaatg caaattccgt cagaactgct gtattgactg
      601 caggagcgat taaaacggag catttggcag cagggcaaat atcggcggat aagttagcga
      661 ttgggctagg tgggaatttg ctggttaatc ctatttttgc aacacccgat ttgtcaatag
      721 ctccgtttgg ctggaactac tggcgaggag aagttggtga tcggctaaat attgacaccc
      781 gtactatttt caataggaat gaacaagata attacggact aaaaaatgga ggactaccaa
      841 atgagttagt attttcgatg cggtatagca ctacaaagga aacctctgat actgggcgaa
      901 ttgggtggtt atctcaggat attaatgttg tgcctaataa aaaatatatt gcctccgtat
      961 ggttagcttg tcatcgtggg caagctaaat tagtcattga gaatatcgaa aaacctggtg
     1021 gtgcttattt aggtcggata ggcaacagcg aggtaattac tggctatagt gctcatcaag
     1081 gcgaatttaa aaatatgaaa cgggttaagg ttgtatttac tgcacctact tcaggctgta
     1141 ttcgtttcgc attacgatta gataatattc aaggtaaagc taa
//
LOCUS       DANLXO010000220         1107 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.226, whole genome shotgun sequence.
ACCESSION   DANLXO010000220 DANLXO010000000
VERSION     DANLXO010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.226"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(14..>1107)
                     /locus_tag="PXD69_002709"
     CDS             complement(14..>1107)
                     /locus_tag="PXD69_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284837.1"
                     /translation="CTKVKGVRFFNNIAIGGRNVSAYGATSCSDIFIFGNREQGMAVT
                     TVDVEAGVQVEDVQTGECVVANNIFRHDIWMSGAKNAIINSNLCRRLRVTSGNPTDTG
                     SNNVEFSNNQAKSIAISKYGSFDNPSLFIDNINFINNILEPSEFNQDVYIDGTILKQC
                     QFINNRCISKSKQYSVRLARNNPFLNLTFKSNKLSDNPAIISGKQGVIFCDDLSLGVN
                     KHRLRLRFSSPINFTVNQEWQKMPFDRVLNDINGHVDIVSGQFIARTGGTFHLKGKIT
                     VTNSSEDVLNLYQLRLLINNEEKERLINQSVSPKNSKSNTNGMTTINFDTVVDLKVGD
                     IVDLQYKTTHELTLLSDSFLSQIYVTQEF"
BASE COUNT          348 a          218 c          167 g          374 t
ORIGIN      
        1 gttttttagt cacttaaaac tcctgagtca cataaatttg agataaaaat gagtctgaca
       61 gtaatgtcaa ctcatgcgtt gttttatact gcaaatcaac aatgtcacct acttttaaat
      121 caactacagt atcaaaattg attgttgtca taccatttgt atttgatttg ctgtttttag
      181 gtgaaacact ttgattaatc agtctttctt tctcttcgtt atttattaac agcctgagtt
      241 gatataaatt cagcacatct tccgatgaat ttgtaaccgt tattttacct tttaaatgaa
      301 aagtcccgcc tgtccttgca ataaattgac cactgacaat atcaacatga ccattgatat
      361 catttaacac tctgtcaaac ggcatttttt gccattcttg attaacagta aaattaatcg
      421 gcgatgaaaa tcgcaatctt aatctgtgct tatttactcc taagctcaaa tcatcgcaga
      481 aaataacacc ttgcttacct gatataatcg caggattgtc cgataattta ttactcttaa
      541 atgttaaatt taagaacgga ttattgcgag caagtctgac agaatattgc ttagacttgc
      601 taatacaacg attattaata aattggcact gttttaaaat tgtcccgtca atatacacat
      661 cttgattaaa ttcactgggc tccaaaatgt tattaataaa attgatatta tcaataaaca
      721 atgaaggatt atcgaaagaa ccatatttcg atattgcaat agattttgct tgattatttg
      781 aaaattctac attgttgctg cctgtgtcag tcggattacc tgatgtgaca cgcaagcgac
      841 ggcagaggtt gctgttgata atggcatttt tagcaccaga catccaaata tcgtgtctga
      901 aaatattatt cgctaccaca cattcgccag tttgtacatc ttccacttgt acgcccgctt
      961 ccacatcgac tgtcgtcact gccatcccct gttcacgatt accaaaaatg aaaatatcag
     1021 agcaagatgt tgcaccgtaa gctgatacat tgcgacctcc aattgctata ttgttaaaaa
     1081 atcgcacacc tttaactttg gtgcaga
//
LOCUS       DANLXO010000221         1093 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.227, whole genome shotgun sequence.
ACCESSION   DANLXO010000221 DANLXO010000000
VERSION     DANLXO010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.227"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..192
                     /locus_tag="PXD69_002710"
     CDS             <1..192
                     /locus_tag="PXD69_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284838.1"
                     /translation="PQDGSVIDWDNIKNAKLTKYPLDNSEKRTSYLGCFTTDVSESYT
                     VDGESVRDIQLNALRKVNE"
     gene            192..560
                     /locus_tag="PXD69_002711"
     CDS             192..560
                     /locus_tag="PXD69_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284839.1"
                     /translation="MKITLNLGIEYNGKIRRDCTVRLLTMGGQCTAQEMIADLGFEEN
                     SEALSKREQTLVDMAYLSQQVTFDGIYQGNVTAQFLFDNLATEDYWQLIEATLTLRKK
                     RLENGVSQSESESPANPDLA"
     gene            590..778
                     /locus_tag="PXD69_002712"
     CDS             590..778
                     /locus_tag="PXD69_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284840.1"
                     /translation="MILLSKFAITAEQVWQMPLLEVFAWIESYLESEGVKTPHSPMGA
                     NSEVKRESYVFTRCGKIE"
     gene            831..>1093
                     /locus_tag="PXD69_002713"
     CDS             831..>1093
                     /locus_tag="PXD69_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284841.1"
                     /translation="MAKNMKVQLELTAKDTASPVLNQAAKTAEKAFKNTERAAQKSGN
                     AQTQAAQKAANATESSNRKIEQSYRNARRVAADVSRARETLGVR"
BASE COUNT          348 a          216 c          274 g          255 t
ORIGIN      
        1 cctcaagacg gttcggtaat tgattgggat aacattaaaa atgcgaagct cactaaatac
       61 ccgttagaca atagcgaaaa acgcacctct tatttaggct gttttactac cgatgtgagc
      121 gagtcttaca ccgttgatgg tgagtcggtg cgtgatattc aactcaacgc attgcgtaag
      181 gtgaatgaat aatgaaaatc actttaaatc ttggcattga atataacggg aaaattcgcc
      241 gtgattgtac ggtgcgattg ctgacgatgg gcggtcaatg cacggctcaa gaaatgattg
      301 cggatttagg gtttgaggaa aactcggaag ccctatcaaa gcgtgaacaa accttggtcg
      361 atatggctta cctttcgcag caagttacct ttgatggtat ttatcaaggt aatgtgacgg
      421 ctcaattttt atttgacaat ttagctaccg aagactactg gcagttgatt gaggcaacgc
      481 tcacactccg aaaaaagcgg ttagaaaatg gggtgagcca aagcgagagc gaaagcccgg
      541 caaatcccga tttggcgtag cagaagcctt taagcagtac cgacaagcgg tgattttact
      601 ctcaaaattt gcaattaccg ccgagcaggt atggcaaatg ccgttgcttg aggtatttgc
      661 gtggattgag agctacttgg agagtgaggg cgtaaaaaca ccgcatagcc caatgggtgc
      721 gaatagcgaa gtgaaacgcg aaagctatgt ctttactcgg tgtggcaaaa ttgaataggg
      781 gcgaaagccc cttttttgta ctttaaaatg agtttaaaga gactttaaaa atggcaaaaa
      841 atatgaaagt gcaactggaa ttgacggcaa aagatactgc ctccccagtt ttaaaccaag
      901 ccgctaaaac cgccgaaaaa gcctttaaaa atacagagcg agcggcacaa aaaagtggca
      961 atgctcaaac gcaagcagca cagaaagcag cgaatgctac agaaagctca aatcggaaaa
     1021 tagaacagag ttaccgtaat gcccgccgag tggctgccga tgtgagccga gcccgtgaaa
     1081 cattaggtgt tcg
//
LOCUS       DANLXO010000222         1083 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.228, whole genome shotgun sequence.
ACCESSION   DANLXO010000222 DANLXO010000000
VERSION     DANLXO010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.228"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(124..354)
                     /locus_tag="PXD69_002714"
     CDS             complement(124..354)
                     /locus_tag="PXD69_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284842.1"
                     /translation="MALHRCPECRKRISDSLEHCIHCGFSFKEADLAIYRQKLEQRRL
                     HNQEINRKSVKLQLIWLVIFIAVIALASWITN"
     gene            complement(362..1081)
                     /locus_tag="PXD69_002715"
     CDS             complement(362..1081)
                     /locus_tag="PXD69_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284843.1"
                     /translation="MINSSFSLAFFTLTSFATAYCYGWGQAIFHGYPWWHVEIGNASM
                     ARSLAYVFGTSVILFLCYALGYSLLNKVFQLHYFRNLGWLRVIVLVSVFTVPVILTFY
                     LFTGIVPIYISFIYIFVSGVSVFFFRKRWNNTKFDLDFRKMLLGGSFALFNIFIFLYF
                     SLLSLHIGYLRAGLRTTYDYIEIENQKYYILSTNSDNGYIMGTKIRGNQSFLFFNRDT
                     HQYYHVHIEQCTDSRLCKVIV"
BASE COUNT          383 a          198 c          178 g          324 t
ORIGIN      
        1 attttttatg aaaaatctta taatattgaa tatttactcc agttttaatc gagaattatg
       61 ttctttttta ttttgttatt ctctttaggt ataaaaaaac ccggtaaata ccgggctttt
      121 atttcaattg gttatccaac ttgcgagagc aattaccgca ataaaaataa ctaaccaaat
      181 aagttgtaat tttacgcttt tgcggttgat ctcctggttg tgtaatcggc gctgttctaa
      241 cttttgccga tatatcgcta aatcggcttc tttaaacgag aagccacaat gtatgcaatg
      301 ttctaaactg tcgctaatac gctttcgaca ctccggacaa cggtgtaatg ccataattac
      361 ctcaaactat tactttgcat aatcggctat ccgtacattg ttcaatatga acatggtagt
      421 attgatgagt atcacgattg aaaaacaaga aagattgatt acctcttatt tttgttccca
      481 taatgtagcc gttatcactg ttggtggata atatgtagta tttttgattc tctatttcga
      541 tgtaatcata ggtagttctt agtccggcac gcaaataacc aatatgcaat gagagcaaac
      601 tgaaatagag aaaaataaag atgttaaaca gggcaaaact tcctcctaat agcatctttc
      661 taaagtccag atcaaacttg gtattattcc atctcttgcg gaagaagaat acgctcacac
      721 cacttacaaa aatatagata aaagagatat aaatgggcac tatcccggta aataagtaaa
      781 aagtaagaat aacaggcact gtaaacacag aaaccaacac aatcaccctt aaccaaccta
      841 gatttcggaa ataatgcagc tgaaaaactt tatttagtaa actataacct agtgcataac
      901 acaagaataa gatgacggaa gtaccgaata cataagccaa acttcttgcc atactggcat
      961 tgccgatttc aacatgccac caagggtagc catgaaatat ggcttgtccc caaccgtaac
     1021 agtaagcggt agcaaaacta gttaatgtaa aaaatgcaag agaaaatgaa gaattgataa
     1081 ttt
//
LOCUS       DANLXO010000223         1060 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.229, whole genome shotgun sequence.
ACCESSION   DANLXO010000223 DANLXO010000000
VERSION     DANLXO010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.229"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            276..803
                     /locus_tag="PXD69_002716"
     CDS             276..803
                     /locus_tag="PXD69_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL6284844.1"
                     /translation="MNEEKYFSVDVSDETHVIRLHETLEQAKQSCLNGATEAYEFAGD
                     MDDHESYESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERASELFGEAEQVIEPPTLLE
                     NNGWISIEDKLPPIETDVLGLCDISGMQLILIVSRELADNEWYFLSVNQYGLDDDVIA
                     VTHWQPLPEPPKEEK"
     gene            800..1003
                     /locus_tag="PXD69_002717"
     CDS             800..1003
                     /locus_tag="PXD69_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284845.1"
                     /translation="MTDTERLDFIAQRKLDVRYSDLVDEFIIASYTKPHEQYFHWARN
                     ADLRTAIDEAMKEMRGLNNATTN"
BASE COUNT          366 a          195 c          229 g          270 t
ORIGIN      
        1 gcagtaacat tgacgttacc ttgcccatta aaagaacctc aagaaaatat gtggtttatt
       61 gacaatgatt ttaccatagt aaaatctatg ttcgcaaatg ccccctttgt aaaaaaattc
      121 ttgccacaag ggcgatgttt cgcttcagaa gaagacgctc aagaatggtt agatgcaatg
      181 cgaaatagtc gtaggtaaat cggcagcact aacagctgaa tgctgctgtt gaatttcttg
      241 tatatccaca taaacacgga acgcggagaa agaaaatgaa tgaagaaaaa tatttttcgg
      301 tcgatgtctc ggatgagaca catgtaataa ggttgcacga aacattagag caagcaaaac
      361 aaagctgttt aaatggtgct actgaagcct atgagtttgc gggtgacatg gatgatcacg
      421 aaagctatga aagctatgaa gcctatgatt taccctatgc agtttatggt gttgttttag
      481 gtagagcaaa atcagatatt cgtccactaa cagacgaaga aagagcatcg gagttatttg
      541 gggaagctga acaagttatt gaaccaccaa cacttttaga aaacaacggc tggatttcca
      601 ttgaggacaa attaccacct attgaaacgg atgtgctagg gttatgcgat atttcaggaa
      661 tgcagttaat tttaatagtt tcaagagaac ttgccgataa cgagtggtat tttcttagtg
      721 taaatcaata tgggcttgat gacgatgtga ttgcagtaac ccactggcaa ccacttcccg
      781 aaccaccaaa ggaggaaaaa tgaccgacac cgaacgctta gactttatcg cccaacgcaa
      841 attagatgtc cgatattctg atttggtgga cgaatttatt attgctagct ataccaaacc
      901 gcacgagcag tattttcatt gggcaagaaa tgccgattta cgcacggcga ttgatgaagc
      961 aatgaaagaa atgagaggac taaacaatgc aacaactaat taaaaacatc gaacaatggg
     1021 cggaagaccg caatttaatt aacggctcaa ccccacaaaa
//
LOCUS       DANLXO010000224         1049 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.230, whole genome shotgun sequence.
ACCESSION   DANLXO010000224 DANLXO010000000
VERSION     DANLXO010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.230"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            207..455
                     /locus_tag="PXD69_002718"
     CDS             207..455
                     /locus_tag="PXD69_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284846.1"
                     /translation="MISGEKMTWESLGASAIGGAIGGGIGATMKAGAVTASTLSALGG
                     GMGEGLYKSTSQGIKNSIGIKASCNQSGSDYGDGCDYQ"
     gene            467..670
                     /locus_tag="PXD69_002719"
     CDS             467..670
                     /locus_tag="PXD69_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284847.1"
                     /translation="MKIQFPISYQEFRENYFEKKPLLMKGAISQKDLLSWKSINEILP
                     RCDLISEDAIKVMHKGKRAHKKD"
     gene            709..>1049
                     /locus_tag="PXD69_002720"
     CDS             709..>1049
                     /locus_tag="PXD69_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_046701250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6284848.1"
                     /translation="MKITHCKLKKSLQKKLLEFFVAEVTARTAADLLGIQPNTAALFY
                     HKIRLVIEHHLALEAHEIFEGKIEVDESYFGGHRKGKRGRGAAGKVAVFGLLKRQGKV
                     FTKYQIRNANAG"
BASE COUNT          344 a          138 c          253 g          314 t
ORIGIN      
        1 tcttgtaaag aagattgtaa aaaataaaaa tgtacaagat gttattgagg ctatagttct
       61 aatagtattt gttgtaatta taaacatcat agaggaatat ctcttatgaa agagttaaaa
      121 attgaggatt gccaatttgt ttcggcaggc ttgcacttgt tattgtagga gctgttgctg
      181 gagctgcata ttatgttggg aatggtatga tttctgggga aaaaatgact tgggagagtt
      241 tgggagcatc agctataggt ggggctattg gtggcggtat tggagcaaca atgaaagctg
      301 gtgcggtgac agcgtcaacc ttatctgctt taggtggtgg tatgggggag ggcttgtata
      361 aaagtacttc tcaaggtatc aaaaatagta ttggtataaa ggcgagttgc aatcaatcag
      421 gttcggatta tggtgatgga tgtgattatc aataagagag tatattatga aaattcaatt
      481 tccaatttct tatcaagaat ttcgtgaaaa ctattttgag aaaaaaccac ttttaatgaa
      541 aggagcaata tctcagaaag atttactttc ttggaagtca ataaatgaaa tattacctcg
      601 ctgtgattta atttctgagg atgcaattaa ggtaatgcat aaagggaaaa gggctcataa
      661 aaaagattag gggctgtagt agattagcat cactgctata ctacaaaaat gaagataacc
      721 cattgtaaat taaagaaatc tttgcagaaa aagcttcttg aattttttgt tgctgaagtg
      781 accgctagaa ccgctgctga tttattaggt attcaaccca atacggcagc cctgttttac
      841 cacaaaatta ggctggtcat tgaacaccat ttagcccttg aagctcatga aatttttgag
      901 ggaaaaattg aggtagatga aagctatttt ggtggtcatc gcaaaggaaa acgagggcga
      961 ggtgcggctg ggaaagtcgc tgtattcggt ttgttgaagc gtcaaggaaa ggtgtttaca
     1021 aaataccaaa tcagaaacgc taatgccgg
//
LOCUS       DANLXO010000225         1044 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.231, whole genome shotgun sequence.
ACCESSION   DANLXO010000225 DANLXO010000000
VERSION     DANLXO010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.231"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>1044
                     /locus_tag="PXD69_002721"
     CDS             <1..>1044
                     /locus_tag="PXD69_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284849.1"
                     /translation="YSFSLADRDEIWTAFIALESDQCPAIERLLTWCQKSSGQENIEP
                     EALLLGAIAVSWLFTSTDKRSRNGYINALAHLLWNRLEIALALFKEFIEVNDPYVMEG
                     ILSAIHGAVAYSENSSGLKALALEIDNQIFNQPETEEIYPNVLVRDYARHIIEYSLQK
                     DEYSSDDIEIIRERITPPYRSSFPQNLPTNEEIDKKYHSDGQRIIIRSMTTEYGRGMC
                     GYGDFGRYTFEAKFRNWESYKFGNLINVDLLSNYACQMIFEQFGYDDKKHLEFDKETR
                     SRYWRRDDTNKIERIGKKYQWLALYEILARVMDNFPTFSNRYADEIGLEYITNLDNFY
                     LPKTQIKIVPPTKT"
BASE COUNT          349 a          156 c          199 g          340 t
ORIGIN      
        1 tattcttttt ctttggcaga tagagatgag atttggacag cttttattgc tttggagtct
       61 gatcaatgcc cagcaattga acgattacta acttggtgtc agaaatcaag tggtcaagaa
      121 aatattgaac ccgaagcact attattgggt gcaattgctg ttagttggct atttacttct
      181 accgataaac gaagtagaaa tggctatatt aatgcactgg ctcatttatt atggaataga
      241 ttggaaattg cattggcgtt attcaaggaa tttatagagg ttaatgaccc ttatgttatg
      301 gaaggtattt tatctgccat tcacggagct gttgcttatt ctgaaaattc atctggctta
      361 aaagcacttg cattagagat agataatcaa atatttaatc aacctgaaac agaagaaatt
      421 tatcccaatg ttttggttcg tgattatgct cgccatatta ttgaatactc tttgcaaaaa
      481 gatgaatatt catcagatga tattgagata atcagagaaa gaattacgcc accttataga
      541 agttcatttc cccaaaactt accaaccaat gaagaaattg ataaaaaata tcattctgat
      601 ggacaaagaa tcattatccg ttcaatgaca actgaatatg gtcgtggtat gtgtggatat
      661 ggtgattttg gcagatatac ttttgaagcc aaattccgaa attgggagag ttataaattc
      721 ggcaatctca tcaatgttga tttattaagt aattatgctt gccaaatgat ttttgagcaa
      781 tttggctatg atgacaagaa gcaccttgag tttgataaag aaactcgttc aagatattgg
      841 cgaagagatg atactaataa aattgagcga attggcaaga aatatcaatg gttggctttg
      901 tatgaaatct tggcaagggt gatggataat tttcctactt tttctaatcg ctatgccgat
      961 gaaatagggc ttgaatatat tactaatttg gacaactttt atctacccaa aacccaaatt
     1021 aaaattgtac cgccaactaa aaca
//
LOCUS       DANLXO010000226         1018 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.232, whole genome shotgun sequence.
ACCESSION   DANLXO010000226 DANLXO010000000
VERSION     DANLXO010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.232"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            137..763
                     /locus_tag="PXD69_002722"
     CDS             137..763
                     /locus_tag="PXD69_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL6284850.1"
                     /translation="MTKIKFYGNLKKFGSEFSLEVKDTAEAIRALCTQISGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFNFVLGAALIGAA
                     FFTGGASIAAWGAGAKMMGMLGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSNL
                     NNLVTQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            812..>1018
                     /locus_tag="PXD69_002723"
     CDS             812..>1018
                     /locus_tag="PXD69_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284851.1"
                     /translation="MNLTKAESNLNAKITEEKKARVDADKVNADKLTDITSRVANAES
                     TITNFQSTKANKSEVASLAQSSLQA"
BASE COUNT          354 a          179 c          219 g          266 t
ORIGIN      
        1 atttaatttg tttctcgaaa ataaaaaaat aactagtaat tgcatataaa caaataagta
       61 ataatatgct tatagagtta agaaaaataa agaacataaa tcccctttat tttggctata
      121 attgtaatgg tgagtcatga ctaaaattaa attttacggc aatttaaaaa aatttggtag
      181 tgaatttagc ttagaagtta aagatactgc cgaagctatc cgagccttat gtacacagat
      241 tagcggattg cgtgaggcat tacgagacgg tgtttataaa gtccgtatcg gcaaacagta
      301 tttagacccg tcagcccttg aaaaagggct tttttattgt ctgaagaaag ggcaaaccat
      361 tcattttacc cctgttatca aaggagcgaa aagcggtggc gtgtttaatt ttgttttagg
      421 tgcagccttg atcggagccg cattttttac tggcggtgct tctattgcgg cttggggagc
      481 tggagcaaaa atgatgggta tgttaggggc ttcgatgtta ctaggaggag tttcccaaat
      541 gctcaccaaa atgccaaaag cccccacaat gggtaatgaa acagaaaaag aaagctcaac
      601 ggctttttca aatttaaata acttggtgac tcaaggcaaa cctgtgccgt tggcttatgg
      661 cttaattcgg accggctcgc ttgtgatatc gcagggagtt gagacgatca ccattaaaga
      721 aaaccaaccg gcaagcaaca agaaaacagg ctttagaaaa taagggataa ttaccgattc
      781 agcacaagca cagcaactta atcagttatc tgtgaacttg accaaagcag agagcaattt
      841 aaatgccaaa atcacggaag aaaaaaaagc tcgtgttgat gcagataaag tgaatgcaga
      901 taaactcaca gacataacaa gccgtgttgc aaatgcggaa tcaactatta ccaatttcca
      961 atcaaccaaa gcgaataaaa gtgaggttgc gagccttgca caaagttcgt tgcaggca
//
LOCUS       DANLXO010000227          983 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.233, whole genome shotgun sequence.
ACCESSION   DANLXO010000227 DANLXO010000000
VERSION     DANLXO010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.233"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            1..983
                     /locus_tag="PXD69_002724"
                     /pseudo
     CDS             1..983
                     /locus_tag="PXD69_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484596.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          343 a          141 c          167 g          332 t
ORIGIN      
        1 aacaaaatta ctcatcaaat ttaagtcgag tatttttgtt ttgataagaa acaatggata
       61 aaggaagttc ataaatattc aaaaggtgga tttaagagat gtgttaatat ccctttcttt
      121 agatttagta agtttttcct taataatgca caacgaacag ccttttcata tgtaactcat
      181 tacattaaga aacattccta tgcctatagt aaggcagaca atattcaaga attattagta
      241 aagtttttct ctagaaagca acctgttatg caaagtgcat ttaatcatca aaaaaggatt
      301 gttaagtggt tatgggctga attttgggat aagaatatta tctcgatgac acttagaatt
      361 gatggttata gaaatgctaa cttatggcat tatttacgtt atcaatcacg gattgaggta
      421 ttgtataaaa tagcaaatga acacccgaat ctactaccat tattagccta tgttaaacct
      481 gagtactgga aatgctcgga cttatttagt tatcaaaatt gggtaagaag ccgtgataaa
      541 cagcctttta ttttgtatgc taaatgccaa gataagatgt tatgtgaatc aaaggggcaa
      601 tggagatggt taaaaaaaca gtcgagaata gttgtagatc aatgttttct acatgttaat
      661 caatggcagt tattaacaga aattcaaatg cctttcaaga tcccagtatg tgtcatatgt
      721 ttcatactta ctaattttag catgatcagc tgtgagttag atcgatctag acaacgtcga
      781 ttactctcta tttttattca atatatctat cattattgga aagataatgg gtttagacaa
      841 ttaaagatac atctttctca tctgagagtg ctttttcaag atattgaaga ttacatgata
      901 catgaggggt atttacatgg tatacctcag acttggcaac atttggttta ccacctcaac
      961 cttataaatt caaatacatc aaa
//
LOCUS       DANLXO010000228          981 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.234, whole genome shotgun sequence.
ACCESSION   DANLXO010000228 DANLXO010000000
VERSION     DANLXO010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.234"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(48..251)
                     /locus_tag="PXD69_002725"
     CDS             complement(48..251)
                     /locus_tag="PXD69_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284852.1"
                     /translation="MTDTERLDFIAQRKLDVRYSDLVDEFIIASYTKPHEQYFHWARN
                     ADLRTAIDEAMKEMRGLNNATTN"
     gene            complement(248..739)
                     /locus_tag="PXD69_002726"
     CDS             complement(248..739)
                     /locus_tag="PXD69_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL6284853.1"
                     /translation="MNEDKFFSVDVSNDIHILNLHETLEQAKQSCLNGATEAYEFADD
                     MDDHESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERESELFGEAEQVIEPPTLVENNG
                     WISVKDRLPEIRKEVLITNNFIMIAQFNGESWFKPGGFLGIQPVYGVTHWQPLPEPPK
                     EEK"
BASE COUNT          263 a          203 c          180 g          335 t
ORIGIN      
        1 ttgagccgtt aattaaattg cggtcttccg cccattgttc gatgttttta attagttgtt
       61 gcattgttta gtcctctcat ttctttcatt gcttcatcaa tcgccgtgcg taaatcggca
      121 tttcttgccc aatgaaaata ctgctcgtgc ggtttggtat agctagcaat aataaattcg
      181 tccaccaaat cagaatatcg gacatctaat ttgcgttggg cgataaagtc taagcgttcg
      241 gtgtcggtca tttttcctcc tttggtggtt cgggaagtgg ttgccagtgg gtaacaccat
      301 agacaggctg aatacctaag aatccacccg gcttgaacca gctctcgcca ttgaattgag
      361 caatcataat aaaattgttt gttatcaaga cttctttgcg gatttctggc aatctgtctt
      421 tgactgaaat ccagccgttg ttttctacaa gtgttggtgg ttcaataact tgttcagctt
      481 ccccaaataa ctctgattct ctttcttcat cggttagtgg gcggatatct gattttgctc
      541 tacctaaaac aacaccataa actgcatagg gtaaatcata ggcttcatag ctttcgtgat
      601 catccatgtc atccgcaaac tcataggctt cagtagcacc atttaaacag ctttgttttg
      661 cttgctctaa ggtttcgtgc agatttagga tatgtatatc atttgataca tccaccgaaa
      721 aaaatttgtc ttcattcatt ttctttctcc aaaataccaa tagttgagag aataataagc
      781 atactatctc atgctattct taagtgcatc taaccacgct ccagcatctt cggctgaagc
      841 gaaatataac ccttgatcaa atagtttttc tatataagaa tgtgtaggga aatttgattt
      901 tatcacattg aaattatcgc caataaacca cattccatct cttggttctt ttaatggaca
      961 aggaagagtg agagttactg t
//
LOCUS       DANLXO010000229          979 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.235, whole genome shotgun sequence.
ACCESSION   DANLXO010000229 DANLXO010000000
VERSION     DANLXO010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.235"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            134..820
                     /locus_tag="PXD69_002727"
     CDS             134..820
                     /locus_tag="PXD69_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284854.1"
                     /translation="MAANSINASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGT
                     TISGGTISGTTITGGIIKGARIEGLTGKFTGELEINQLIGGNIYEAKTWTSKATGKSK
                     TYSETKNSFALSDTYYEYVCQFVLPATKATRTLYVVHTPTGESKSETFYGSGSNRTPT
                     TITLPSVIDISNTISPNVSNPFNDSGAILIANTQYVVTCRAWCAGRGRSAKVNFRAII
                     SSTNGSSYQL"
BASE COUNT          344 a          178 c          202 g          255 t
ORIGIN      
        1 cccttggcaa aatgccggtg taaccgctat ccacggtggc tcaatagtta ctaataccgt
       61 tactgctcaa caaattgcag caaataccat taccgccaac gaaatcgcag ccggcacgat
      121 tgcagctcga aatatggcag caaactcgat taatgcaagt catattgtgg ggagttcgat
      181 cactgcggat aagctaaatg taaacaattt agcggcaata tcggcaaatc ttggtaaggt
      241 aactgctggt acaattacag ggacgacaat tagtggtggg acaatttcag gtacaacaat
      301 tacaggggga ataattaaag gagcaagaat tgagggatta acaggtaaat ttactggaga
      361 acttgaaatc aaccaattga tcggaggtaa tatctatgag gctaaaactt ggacatcaaa
      421 agcaacaggg aaaagtaaaa catattcaga aacgaaaaac agttttgcat taagtgatac
      481 atattatgag tatgtatgtc aatttgtact acctgctaca aaagcgacga gaacattgta
      541 tgttgtccac actccaacag gagagagtaa aagcgaaact ttttatggta gtggtagtaa
      601 tcggacaccg acaacaatta cattaccgtc tgtaattgat attagcaata ctatttcacc
      661 taatgtatct aacccattta atgattctgg ggcaatactc attgctaata ctcaatatgt
      721 agtaacgtgt cgtgcgtggt gtgcagggcg tgggagaagt gctaaagtga attttcgagc
      781 aattatatca tctacaaatg gttcatctta tcaattatag gaggcaaata tgaaaaaaat
      841 tatactactt acaacaatta tggtttcagc ttgtacaact caatataagc aagactatac
      901 aacaaaacca accttttgtt atcaactagc ccctcaagag caattaccgg ggaaaaactg
      961 tattggctca ggagggcat
//
LOCUS       DANLXO010000230          964 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.236, whole genome shotgun sequence.
ACCESSION   DANLXO010000230 DANLXO010000000
VERSION     DANLXO010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.236"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            223..964
                     /locus_tag="PXD69_002728"
                     /pseudo
     CDS             223..964
                     /locus_tag="PXD69_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524908.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein"
BASE COUNT          343 a          167 c          151 g          303 t
ORIGIN      
        1 gactcctcta atagtccact cttgttccat tttggaacat ttttgtatat tatttcgcct
       61 tttctttctc attgtgttct atgtaggcaa cagcattttt tgcaaagtga tcgacgagaa
      121 cattcattac ttcagtccat tttacaggtc ttcctatctt cattccaact tccatcgcta
      181 atctttctat cttgagtttt ttctctaatt taatattgaa cagagcttta tgaaatggtt
      241 gatatagaac aaacgtcagt tgattggatt gatgtaactt attcagctca tattgattcg
      301 gaatctatcc aaaaacaact tatctctttt ttccaaaaca tccatttagg acaaacacgt
      361 cgtacaagac ataacaaaga atatgacaca acggcagaat ggaattcagg ttcagaacac
      421 cgtattttaa aagtttatct aaaaggtaat gaagttcaaa aaagactaca agaagcccag
      481 cacgacttca aaaaatcacc aagtaaaaag tatctgcaaa actcaattca agtattaagt
      541 aatccaaatc tcattgaatt ttcaaaaaaa tgtgttcgtt ttgaagcaag attaaaacaa
      601 cgttatttag ataaacatca aatcccacgc aatttatttg acttaattaa atatcagaga
      661 gattacgaag agcagggtag aagcctgatt aaagacctat ggcaagacgc attcaaagac
      721 attattaagg ctgtcgggga aagcaatatg aatatttaca acagagatca aattcagcgt
      781 ttattacgga aaaattattt ttcaatcact ccaaaaggaa atatgagcta tgcaaaggct
      841 gatcgtttat tcagctttta taagaattta ctaagtgatg gctatagaga aacgctagat
      901 tctatgccaa gaaacacatt ttggagatat gaaaaggatc ttatggccgt tggtttaact
      961 aaaa
//
LOCUS       DANLXO010000231          935 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.237, whole genome shotgun sequence.
ACCESSION   DANLXO010000231 DANLXO010000000
VERSION     DANLXO010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.237"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            88..>935
                     /gene="msrA"
                     /locus_tag="PXD69_002729"
     CDS             88..>935
                     /gene="msrA"
                     /locus_tag="PXD69_002729"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005546455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL6284855.1"
                     /translation="MKYNQLLLCLVSAIFTTSSIANITTPNEMRSENLQDIYLAGGCF
                     WGIEAYMEKIYGVKEATSGYANGKTEQTAYRIIGQTDHAETVHVTYDANKISLEKLLQ
                     YYFKVIDPTSKNKQGNDIGRQYRTGIYYQNEQDKQIILKEIQAQQAKYKQKIQVQVEP
                     LKHYILAEEYHQDYLKKNPNGYCHIDLNQANSIIIDPKDYPKPSDATLKMKLTPLQYS
                     VTQRKNTERSFSNEYWDNTAPGIYVDITTGEPLFSSLDKYDSGCGWPSFTKPIINEVV
                     NYTEDN"
BASE COUNT          360 a          168 c          159 g          248 t
ORIGIN      
        1 tagcaaaaaa gtaagaaatt atgaatgttt aaggttaaac cctcatcctt aaaaaataaa
       61 attacataag ttataaagga gaactggatg aaatacaatc aactgttact atgtttggtg
      121 tctgctatct ttaccacctc ctcaatagca aacatcacaa cccctaacga gatgcgatct
      181 gaaaacttac aggatattta cttggcagga ggatgtttct ggggcattga agcctatatg
      241 gaaaaaatat atggcgtaaa agaggctaca tcgggctatg ccaatggcaa aactgagcaa
      301 actgcttacc gaattatcgg gcaaaccgat catgcagaaa cagttcacgt gacctatgat
      361 gctaataaaa tttctttaga aaagctgttg caatattact ttaaagtaat tgatccaacc
      421 agtaaaaata aacaaggtaa tgatattggc cgccaatatc ggacaggtat ttattatcag
      481 aatgagcaag ataaacaaat tattttaaaa gaaatacaag ctcaacaagc aaaatacaaa
      541 caaaaaatac aagtgcaagt agaaccatta aaacattata ttttggcaga agagtatcat
      601 caggattacc taaagaaaaa tccaaatggc tactgccata ttgatttaaa ccaagccaac
      661 agcattatta tcgatccgaa agattatcct aaacctagtg atgcaacatt aaaaatgaaa
      721 ttaacgcctt tgcaatatag cgttacccaa cgtaaaaata ctgagcgttc attcagcaat
      781 gaatattggg ataataccgc accgggcatt tatgttgata taactacagg agagcctctt
      841 ttttcatctc tcgataaata tgactccggc tgtggctggc caagttttac caaaccaatt
      901 atcaatgagg ttgttaacta taccgaagat aatag
//
LOCUS       DANLXO010000232          892 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.238, whole genome shotgun sequence.
ACCESSION   DANLXO010000232 DANLXO010000000
VERSION     DANLXO010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.238"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            22..834
                     /locus_tag="PXD69_002730"
     CDS             22..834
                     /locus_tag="PXD69_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL6284856.1"
                     /translation="MGRPELERAVLSVQNQTYPCKHYVFVDGEKYHQQAADILKNFPS
                     VIVTYLPMNTGADGWVNSSINAIAPFLVKEDIICYLDDDNWFEPTHVESGVHALLEMQ
                     SDYAYSLRNFYDLDGEFLCIDTIESLGEYNCVYQEPLECNYQLGGVKGVLSINLNDCQ
                     HIDTNCYFIRSEIARLISTAWYTGIHNDRNVYKKLQELALKGNCTKKVTVNYTLDTRK
                     YYGSVFNELLEEPFLLSEYDAYQFTNEVIKFHSEESLKAWGGCLIWEQNNGS"
BASE COUNT          287 a          111 c          181 g          313 t
ORIGIN      
        1 gtagctgtta tcagttcaac aattggtcgt cctgaattag aaagagctgt tttaagcgta
       61 caaaatcaga cttatccttg taaacattat gtttttgttg atggagagaa atatcaccaa
      121 caagcggctg atattttaaa gaattttcca agtgttattg ttacttatct cccaatgaat
      181 accggggctg atggttgggt aaatagcagc attaatgcaa ttgcaccatt tttagtgaaa
      241 gaagatatta tttgttatct ggatgatgat aattggtttg aacctactca cgttgaatct
      301 ggtgtgcatg ctttattaga aatgcaatct gattatgctt actctttacg taatttttat
      361 gatttagatg gcgagttttt gtgtattgat acgattgaat cgttgggaga atataattgc
      421 gtttatcaag aaccattaga atgtaattat caattaggtg gtgttaaagg tgttttatca
      481 ataaatctga atgattgtca gcatattgat acgaattgct attttattcg tagtgagata
      541 gctcgcctta tcagtacggc ttggtacaca ggtattcata atgatagaaa tgtatataaa
      601 aaattacaag aattggcact aaaaggaaat tgtacaaaga aagttacggt taattatact
      661 cttgatacac gtaaatatta tggatcagta tttaatgaat tattagagga gccattttta
      721 ttaagcgaat atgatgccta tcaatttacg aatgaggtga ttaaatttca ttcagaagaa
      781 agccttaaag cttggggagg ttgcttgatt tgggaacaga acaatggctc ataagcgtta
      841 agcgtaatcg tttgcttgtg atcatattca caaaataagg tttttgtatt ag
//
LOCUS       DANLXO010000233          867 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.239, whole genome shotgun sequence.
ACCESSION   DANLXO010000233 DANLXO010000000
VERSION     DANLXO010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.239"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..320)
                     /locus_tag="PXD69_002731"
     CDS             complement(<1..320)
                     /locus_tag="PXD69_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284857.1"
                     /translation="MKQVMNPINTPTQRFKDGNPATGEYGTIVTAEFLNNVQDSVINT
                     QQELHSVLAEAGIEANDEQVNQVAKAIKKIAGDATRDNFNALANPDGYKHIGRCKSVA
                     ELRT"
     gene            complement(317..>867)
                     /locus_tag="PXD69_002732"
     CDS             complement(317..>867)
                     /locus_tag="PXD69_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HDL6284858.1"
                     /translation="LLPPVSYDPNGRWLALSLEVEGRELDRIDARAKTLIDAVDVSTG
                     IFIDDWERVCGLTANSSLPLETRIERVIAKLNQLGGLSIGYITQVAKELGYCIKISEP
                     QPFIAGLSRAGDMLWHKDIMWTFFVDICNPTDDYKRFRASVSMAGDALMGRYKDPILE
                     SLLEEVKPAFSRVWVRYLGDIE"
BASE COUNT          230 a          217 c          162 g          258 t
ORIGIN      
        1 atagtacgta actccgcaac cgatttgcag cgaccgatgt gtttgtaacc atcagggttg
       61 gctaatgcgt taaaattatc acgagtagca tcgcccgcaa ttttcttgat tgctttagcc
      121 acctgattaa cttgttcgtc atttgcttcg attcctgctt cagcaagtac actgtgcaat
      181 tcttgttggg tgttaatgac cgaatcttgg acgttattca aaaattcagc agtcacaatc
      241 gtgccatatt caccagtggc agggttgcca tctttaaaac gctgtgttgg ggtattaatc
      301 ggattcatca cttgtttcat tcaatatctc ctaaatatct tacccacaca cggctaaatg
      361 caggttttac ctcttcaagt agactttcta aaattgggtc tttgtatcgt cccattaacg
      421 catcgccagc cattgacaca cttgctctaa aacgcttgta atcatctgtg gggttgcaaa
      481 tatccacaaa aaatgtccac ataatgtctt tatgccataa catatcccca gctcggctta
      541 gcccagcaat aaagggttgt ggctcactaa ttttgatgca atatccaagc tctttggcca
      601 cttgagtgat atagcctatc gacaatccac ccaactgatt cagctttgca atcacacgct
      661 caattcgggt ttcaagcggt agtgagctat tcgccgttaa gccacaaacc cgctcccaat
      721 catcaataaa aatgcctgtt gatacatcaa cggcatcgat taaagtcttg gctctcgcat
      781 caatgcggtc tagctctctc ccctcaactt caagggataa cgctagccat ctgccgtttg
      841 ggtcatacga tacaggcggt aataaac
//
LOCUS       DANLXO010000234          840 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.240, whole genome shotgun sequence.
ACCESSION   DANLXO010000234 DANLXO010000000
VERSION     DANLXO010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.240"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            85..>840
                     /locus_tag="PXD69_002733"
     CDS             85..>840
                     /locus_tag="PXD69_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDL6284859.1"
                     /translation="MMKKITILGLGWLGLPLAEALQNKGWRVAGTKRTVGELAIECYP
                     LDLNALAVTSEIEQLLAADALVIALPLSQIRPENYGCGIQTLVSLAIEKGLKHLVFTS
                     STSVLPMKSGVFDENAVVDSANLLVKMENWLLSQPIHCDILRLAGLVGKKRHPVFYLA
                     GKQNLSGAGQPVNLVHLEDCIAAISLLLEQPNGQRIFHLCAEQHPSRKDYYSEMAKRF
                     GLADLHFSEENQPLVRLIKADKICQELGFRYYYP"
BASE COUNT          238 a          152 c          198 g          252 t
ORIGIN      
        1 tagaaataaa atagatagca ccacgaggtg ctttttttgt acctgaattt cccctcattc
       61 caattttaat cttgagaaac gtaaatgatg aaaaaaatta ccattttagg gcttggctgg
      121 ctcggactac ctttagctga agcattacaa aataagggct ggcgtgttgc aggtactaag
      181 cgaacggtcg gagaattagc gatagaatgt tatcctctag atttaaatgc gttagcagtg
      241 acaagcgaaa tcgagcaatt acttgctgct gatgcgttag tgattgcctt gccccttagc
      301 caaattcgcc ctgaaaatta cggttgcggt attcaaacat tagtttcgct tgcaatagaa
      361 aagggcttga aacatctggt tttcaccagc tcgacttcgg ttttgccaat gaaatcgggc
      421 gtttttgatg aaaatgcagt ggttgattct gctaacctat tagtaaaaat ggaaaattgg
      481 ttgctgagcc agccaattca ttgtgatatt ttgcgtttag ctggcttggt gggcaaaaaa
      541 cggcacccgg ttttttattt ggcgggaaaa cagaacttga gtggagcagg gcagccggtc
      601 aatttagtgc atttagagga ctgtattgca gccatttcat tgctgttgga gcagccgaac
      661 gggcagcgta tttttcattt atgtgccgaa cagcacccaa gccgtaaaga ttattatagt
      721 gaaatggcaa aacgttttgg gttagcggat ttgcattttt ctgaagaaaa tcaaccgctt
      781 gtaaggctga taaaagcaga caaaatttgc caagagcttg gttttcgtta ttactatcct
//
LOCUS       DANLXO010000235          830 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.241, whole genome shotgun sequence.
ACCESSION   DANLXO010000235 DANLXO010000000
VERSION     DANLXO010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.241"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..624
                     /locus_tag="PXD69_002734"
     CDS             <1..624
                     /locus_tag="PXD69_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL6284860.1"
                     /translation="NTVLNTLQCDYVLFSSEDNYQVIINLKKADYPKNEANFITMTLN
                     KKFGDAKFSGANHYLRCASFFNKKSTNNNEKSVLVDFTNTKTEEDNKCYFDNLLSSYK
                     NNNVKLEPLDIKIIDELGDDKAVIAQKEIQAEIALCKRIFKQLDWSAVDFRIVKRLYR
                     KGFSENEIAVALVRFTDFEDRHCDSHDYLTRTITKAIQNYQQCSKAC"
BASE COUNT          332 a          124 c          134 g          240 t
ORIGIN      
        1 aacacagttt taaacacact acaatgcgat tatgtgctgt tttcttctga agacaactac
       61 caagtcatca tcaatctaaa aaaagctgat taccccaaaa atgaagcaaa tttcattaca
      121 atgactttaa acaagaaatt tggtgatgca aaattttccg gtgcaaacca ttacttaaga
      181 tgtgccagct tcttcaacaa gaaaagcaca aacaacaatg aaaaatcagt tttagttgat
      241 tttacaaaca caaagacaga agaagacaat aaatgttatt ttgataactt attatctagt
      301 tataaaaata acaatgtaaa acttgagcct ttagacatca aaattattga tgagcttgga
      361 gatgataaag cagttattgc acaaaaagaa attcaagcag aaattgcttt gtgtaaacgt
      421 atattcaaac aattagattg gtctgctgtt gattttagaa ttgttaagcg tctgtacagg
      481 aaaggatttt cagaaaatga aattgctgtt gcacttgtca gatttactga ttttgaagac
      541 agacattgtg attcacatga ttatttgaca agaacaatca caaaagccat tcaaaactat
      601 caacaatgct caaaagcttg ttagatgtta taaggaaagt taaaaatcaa caaaagattt
      661 gacaaattta tataaaatcc ttattatata tgaaaaggaa gcgtagcctt aaaacgcaaa
      721 tgtgggttag cacatggtca atctgaaact aatctaggat atttaaggtc tagcagatgg
      781 caagcatcag aaaaacttga aactaatcta ggatatttaa ggcctagcag
//
LOCUS       DANLXO010000236          812 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.242, whole genome shotgun sequence.
ACCESSION   DANLXO010000236 DANLXO010000000
VERSION     DANLXO010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.242"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..164
                     /locus_tag="PXD69_002735"
     CDS             <1..164
                     /locus_tag="PXD69_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284861.1"
                     /translation="NIEELNEEVKAGNIENVIRNNGEKILTNLGFSQEDNAMLMSIWK
                     KLKNNRLRR"
     gene            complement(209..>812)
                     /locus_tag="PXD69_002736"
     CDS             complement(209..>812)
                     /locus_tag="PXD69_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6284862.1"
                     /translation="FLTKVKSKLLQRNIWPPIMENDWYKYGRHQALENCDSAPKIIVG
                     ILSKGYKYSVDHEGVFISSGGTAGYSLINIPNDCLYSIYYIQAILSSKYSEWFVSLSG
                     EVFEGGFIARGTKVQKQIPIPNINFNNPAERLTHDEISDLQKELNQLFSKIEISNERY
                     GVMYRRMFDDKKKKLDDKIKELYNLNELDDIIPSIEDLYS"
BASE COUNT          276 a          117 c          121 g          298 t
ORIGIN      
        1 ttaatataga agaattaaat gaagaagtta aagctggaaa tatagagaat gtcataagaa
       61 acaatggtga aaaaatttta acaaatttag gcttttctca agaagataat gccatgttaa
      121 tgagtatatg gaaaaagcta aaaaataaca ggttaagaag atagcttgaa aaggttgtgt
      181 ggtttataca tcacacaacc ttttagaatt aactatatag atcctctata gatggtataa
      241 tgtcatctaa ttcgtttagg ttgtatagtt cttttatctt atcatctaat tttttcttct
      301 tatcatcaaa cattcttcta tacataaccc catatctttc attagagatt tctatttttg
      361 agaaaagttg atttaactct ttttgtaaat ctgatatttc atcgtgagtt aatctttctg
      421 ctgggttatt gaagtttatg ttagggattg gtatttgttt ttggactttt gttcctctag
      481 caataaagcc accctcaaat acttctcctg ataaagaaac aaaccactct gaatatttag
      541 atgataaaat tgcttgtata taatatatag aatacaaaca atcatttgga atattaatta
      601 aactatatcc agcagttcca cctgatgata taaatacccc ttcatgatca acactatatt
      661 tatatccttt tgatagaatg ccaacaataa ttttaggggc ggagtcgcaa ttctctaaag
      721 cttgatggcg accgtatttg taccaatcgt tttccattat cgggggccat atatttcttt
      781 gtaataattt tgacttaact tttgttagaa aa
//
LOCUS       DANLXO010000237          802 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.243, whole genome shotgun sequence.
ACCESSION   DANLXO010000237 DANLXO010000000
VERSION     DANLXO010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.243"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            24..647
                     /gene="tetR(H)"
                     /locus_tag="PXD69_002737"
     CDS             24..647
                     /gene="tetR(H)"
                     /locus_tag="PXD69_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(H)"
                     /protein_id="HDL6284863.1"
                     /translation="MAKLDKEQVIDNALILLNEVGIEGLTTRKLAQKIGVEQPTLYWH
                     VKNKRALLDALAETILQKHHHHVLPLPNETWQDFLRNNAKSFRQALLMYRDGGKIHAG
                     TRPSESQFETSEQQLQFLCDAGFSLSQAVYALSSIAHFTLGSVLETQEHQESQKEREK
                     VETDTVAYPPLLTQAVAIMDSDNGDAAFLFVLDVMISGLETVLKSAK"
     gene            complement(650..787)
                     /locus_tag="PXD69_002738"
     CDS             complement(650..787)
                     /locus_tag="PXD69_002738"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284864.1"
                     /translation="MPENGVIFSDGIEDDYLQFNAGCIAHIGIADIQGQLISQKGRQR
                     I"
BASE COUNT          252 a          147 c          169 g          234 t
ORIGIN      
        1 gctattttat tttgaggtag gtaatggcaa agctagataa agaacaagtt attgataatg
       61 cgttgatttt acttaatgaa gttggtattg aaggattaac aacgcgtaag ctggcgcaaa
      121 aaataggtgt ggaacaaccc acattgtatt ggcatgtaaa aaataaacgc gctttgttag
      181 atgcattagc agaaactatt ttgcaaaagc accatcatca tgttttgcca ttgccgaatg
      241 aaacatggca ggactttttg cgaaataacg cgaaaagctt ccgccaagcc ttattaatgt
      301 atcgtgatgg tggcaaaatt catgcgggaa cacgcccctc tgaaagtcaa tttgagacat
      361 cagaacagca actacagttt ttgtgtgatg ctgggtttag tctatctcaa gccgtgtatg
      421 cattaagctc tattgcgcat tttacattag gctccgtact ggaaactcaa gagcatcaag
      481 aaagccaaaa agagcgtgaa aaagtagaga cggatactgt tgcctatccg ccattattaa
      541 cccaagccgt tgcaattatg gatagtgata atggtgatgc tgcatttttg tttgtccttg
      601 atgtgatgat ctctggactt gaaacagtat taaagagcgc taaataaatc taaattcgct
      661 gacgcccttt ttggctaatt agttgccctt gtatgtcagc gataccaatg tgagcaatac
      721 aacctgcatt aaattgtaaa tagtcatctt cgatgccatc agagaaaatt acgccattct
      781 ctggcatcaa agatcctaat tg
//
LOCUS       DANLXO010000238          797 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.244, whole genome shotgun sequence.
ACCESSION   DANLXO010000238 DANLXO010000000
VERSION     DANLXO010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.244"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            125..514
                     /locus_tag="PXD69_002739"
     CDS             125..514
                     /locus_tag="PXD69_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL6284865.1"
                     /translation="MADPIEWSIITTDCFDEWFGQQDGSTQERVLACLIYLRKFGYSL
                     GRPYADTVYQSKFPNMKELRIQNKGKPIRAFYAFDPLRQAIVLCAGEKGKDKRFYEKM
                     IALADAEFTSYLNNLEKENENVRSNAQ"
     gene            486..785
                     /locus_tag="PXD69_002740"
     CDS             486..785
                     /locus_tag="PXD69_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL6284866.1"
                     /translation="MKTLDQMLNELSPERRQKVEDMAQEMIREIQLSKLREELNLSQQ
                     QLATALGISQPAIAKLEQKDNDPRLSTLKRYIEAMGGKLKLAVELPTGDERVIRI"
BASE COUNT          278 a          138 c          151 g          230 t
ORIGIN      
        1 tgttgataaa aaaagaccgc ttgtagtcat acaaacggct tagtaggaag agtaaattgc
       61 tttacataat ataacctttt atttatactt catttataaa tagtaagtta taaaaggttc
      121 aaaaatggca gaccctatag aatggtctat tatcacgact gactgctttg atgaatggtt
      181 cggtcaacaa gatggaagta ctcaagaacg tgtcttggct tgtttaatct atctgcggaa
      241 attcggttat agtctaggca gaccttatgc tgatacagtt tatcagtcta aattccctaa
      301 tatgaaagag ttacgcattc aaaacaaagg taagccaatt cgagcatttt atgcttttga
      361 ccctttacgc caagcgatag tactttgtgc tggcgagaaa ggtaaagaca aaagattcta
      421 tgaaaaaatg atcgctcttg ctgatgcgga atttacctcc tatttaaata atttagagaa
      481 agaaaatgaa aacgttagat caaatgctca atgaactctc tcctgaacgc cgccaaaaag
      541 tggaagatat ggctcaagaa atgattagag agatacaact ttcaaaacta agagaagagc
      601 taaatctctc tcaacaacaa ttagctacag ctctcggtat ttcacagcct gctattgcta
      661 aacttgaaca gaaagataac gatccaagat tatccacgct caaacgctat attgaagcaa
      721 tgggcggtaa gttaaaactt gccgttgaat tgcctacagg cgatgagcgt gtaattagga
      781 tttaattact ttgttaa
//
LOCUS       DANLXO010000239          776 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.245, whole genome shotgun sequence.
ACCESSION   DANLXO010000239 DANLXO010000000
VERSION     DANLXO010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.245"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            64..>776
                     /locus_tag="PXD69_002741"
     CDS             64..>776
                     /locus_tag="PXD69_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284867.1"
                     /translation="MRSTFKLTLAALAVSIVLSGCKSSQGPSIVADSPPPKEITATDG
                     NDKEKTDNKEKKSAQPNKSDPQPDKPANAKDPVKPDAETNKPSKKDKEYTPPATEKID
                     NSSVQPDKMVPNPIENKENDSNKPNPKESDSDNNDKVTEGNKPNAPTETVNKDKEAEK
                     SKKENKEDSSNNTPNINFDGAKPIDTDSKGSPYRVINLNPRKSVVNASAMQKVDFDSF
                     TDESVENSPFVSSDTEKEY"
BASE COUNT          324 a          149 c          137 g          166 t
ORIGIN      
        1 ctattgccaa acaggaaata tatccattaa aattttatgg atttaatctg acggagacaa
       61 aatatgcgtt ctacattcaa acttactctt gcagctttag ctgtttctat tgttttaagt
      121 ggctgtaaat ctagccaagg tccatctatt gttgcagaca gccctccacc taaggaaata
      181 acagctactg atggcaacga taaagagaaa accgataaca aagagaaaaa gtctgcgcaa
      241 ccaaataaat ccgatcctca accggataaa cctgctaacg caaaagaccc agtaaaacct
      301 gatgcggaga caaataaacc aagtaaaaaa gataaagaat atacaccacc tgctactgaa
      361 aaaatcgata actcatcagt acagccggat aaaatggtgc ctaatcctat cgagaataag
      421 gaaaacgaca gtaataaacc taaccccaaa gaaagcgata gcgataataa tgacaaagtc
      481 actgaaggca ataaaccaaa tgccccaaca gaaacagtaa ataaagataa agaagctgag
      541 aaaagtaaaa aggagaataa agaggactca agcaataata ctcctaacat taattttgac
      601 ggggcaaagc ctatagatac agatagtaaa ggtagcccgt accgagtaat aaacctaaat
      661 ccgagaaaaa gcgtagtaaa tgcaagtgct atgcaaaaag tagatttcga ctcttttacg
      721 gatgaatctg ttgaaaattc accatttgtc agtagcgata ctgaaaaaga atacaa
//
LOCUS       DANLXO010000240          756 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.246, whole genome shotgun sequence.
ACCESSION   DANLXO010000240 DANLXO010000000
VERSION     DANLXO010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.246"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(294..>756)
                     /locus_tag="PXD69_002742"
     CDS             complement(294..>756)
                     /locus_tag="PXD69_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284868.1"
                     /translation="GDRNYQLYIDLATGELVSKLGKGLTTREFDAAVKAFENAFNAKD
                     TAENTSPAESKETEQENKQETTKLVITKPTLKGSEKQIAWADEIINLFIAKIGDTSIP
                     VTATQEQITQAQAMVDNFFAMTNAGKWIEKFKGLNDSSEPKQFWLSVKYGW"
BASE COUNT          169 a          159 c          136 g          292 t
ORIGIN      
        1 atcccgtctt tagggtcctc gaggtcgcct ggtattttat ccattaatct tgctatctct
       61 ccattgttaa tagatagctc tctgcgacta gagataaacc ctatccctct tatagggtat
      121 ctcaagatta ttgtctgtac gtttgttggc acatcgtcac cataagtagc agcgacaatt
      181 tgcccgataa tgcgcataat ttgtggtgtt acttgtgtag tcataataat ctccagttat
      241 ctgtttgttt tagccgtaag cctttgctct tacggcttat ttgttatctc aatctaccat
      301 ccatatttta cggataacca aaattgcttt ggttcgctac tatcatttag acctttaaat
      361 ttttcgatcc actttccagc gtttgtcatt gcaaaaaaat tatctaccat tgcttgagct
      421 tgagtaattt gttcttgcgt tgctgttact gggatagagg tatcaccaat cttcgcaata
      481 aaaagattga tgatttcgtc tgcccaagcg atttgttttt cagagccttt taatgttggt
      541 tttgtgatta caagcttagt tgtttcttgt ttgttctctt gctctgtttc tttgctttct
      601 gctggcgatg tattttcagc ggtgtcttta gcattaaaag cgttctcaaa tgcttttacg
      661 gcagcgtcga actctcttgt tgttaatcct ttgccaagtt tgctcactaa ctcacctgtg
      721 gctaagtcaa tgtacaactg ataattccga tcacct
//
LOCUS       DANLXO010000241          734 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.247, whole genome shotgun sequence.
ACCESSION   DANLXO010000241 DANLXO010000000
VERSION     DANLXO010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.247"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            33..>734
                     /locus_tag="PXD69_002743"
     CDS             33..>734
                     /locus_tag="PXD69_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL6284869.1"
                     /translation="MSKILLIDDDIEFTELLTELLSLEGFKMKVVHNGLEGLNELESN
                     QYDLVLLDVMMPVLSGVKTLKRIRQKYSLPVLMLSARDDQIDRILGLELGADDYVPKP
                     FNNRELVARMKAILRRTTSRPASTDHSEQNYTENISKSLQFAGVELHSGRQQAYYQGC
                     DLDLTGTEFALLQMLMRNSGEILSRELLSLKILGKNLTPYDRAIDMHISNLRKKLPER
                     EDGLPWFKTLRGRGYL"
BASE COUNT          255 a          100 c          143 g          236 t
ORIGIN      
        1 aaagttagtt ttaattttat agggaatatt ttatgtcaaa aatcttatta atagatgatg
       61 atattgagtt tactgagcta ctaactgaat tactttcatt agaaggattt aaaatgaaag
      121 ttgtgcataa tggtttagaa ggcttaaatg agttagagtc taatcaatat gatttagtat
      181 tactagatgt gatgatgccg gtattaagtg gcgtgaaaac attaaaacgt atacgacaaa
      241 aatactcatt acccgtttta atgttaagtg caagagatga tcaaattgat agaatcttag
      301 gtttagaatt aggggctgac gattatgtac cgaaaccttt taataatcgt gaactagtcg
      361 ctagaatgaa agcgatactt cgaagaacaa cctctcgccc agcttcaaca gaccattctg
      421 aacagaatta tactgaaaac atctctaaat cattacaatt tgccggagtt gaattacatt
      481 caggacgtca gcaggcttat tatcaaggat gtgatcttga tttaacgggg actgaatttg
      541 cattattaca aatgttaatg cgaaactcag gggagatttt gtccagagaa ttattgagtt
      601 taaaaatttt agggaaaaat ttaacgcctt atgatcgtgc aattgatatg catatttcta
      661 atcttcgtaa aaaattaccc gaacgggaag atggattacc ttggtttaaa accttaagag
      721 gtcggggtta ctta
//
LOCUS       DANLXO010000242          721 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.249, whole genome shotgun sequence.
ACCESSION   DANLXO010000242 DANLXO010000000
VERSION     DANLXO010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.249"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>721
                     /locus_tag="PXD69_002744"
     CDS             <1..>721
                     /locus_tag="PXD69_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6284870.1"
                     /translation="ESKKQLIELIKKYDSDKEIYSSSSYNESQLRTDFLDPFFGLLGW
                     DITNSKNKLTSEREVIVEEPLKEKVSENVKKPDYTFRFNSQRKFFVEAKKPSVKIKTD
                     PLPAHQVRRYGFTAKLSISVLSNFEYLAIYDCSEIVDVQQDALYARVRLYHYTEYVKF
                     FDEIMNLLGRESVYSGHFDNEWREISQKIENSKQTVDELFFEQINKWRHVLGSELLKI
                     NPCISNNELNDAVQDYINSIIF"
BASE COUNT          276 a           97 c          116 g          232 t
ORIGIN      
        1 tgaatcaaaa aaacaattaa tagagttaat taaaaagtac gatagtgata aagaaattta
       61 ttcttcatcc tcatacaatg agtctcagtt aagaactgac tttttagacc ctttctttgg
      121 tttacttgga tgggatataa ctaactcaaa gaataaactc acatctgaaa gagaagtgat
      181 tgttgaagaa ccactaaaag aaaaagtttc agaaaatgta aaaaaaccag attatacatt
      241 tagattcaat tctcaaagaa agttttttgt tgaagctaaa aagccaagtg tcaaaatcaa
      301 gactgaccct ttacctgctc atcaggtaag acgatatggc ttcacagcaa aattaagtat
      361 ttctgtttta tctaattttg aatatcttgc tatatatgat tgttcagaaa tagttgatgt
      421 acaacaagat gctctatacg caagggtacg attatatcac tatacagaat atgtgaaatt
      481 ttttgatgaa attatgaatc tcttaggtag agaaagtgtt tattcaggtc attttgataa
      541 tgaatggcgt gaaatctctc aaaaaataga aaactctaag caaacagtgg atgaactatt
      601 ttttgaacaa attaataagt ggcggcatgt tctgggtagt gaattactta aaattaaccc
      661 ttgtatttca aacaatgaat taaatgatgc agttcaagac tatattaata gcataatctt
      721 t
//
LOCUS       DANLXO010000243          680 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.250, whole genome shotgun sequence.
ACCESSION   DANLXO010000243 DANLXO010000000
VERSION     DANLXO010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.250"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>680
                     /locus_tag="PXD69_002745"
     CDS             <1..>680
                     /locus_tag="PXD69_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL6284871.1"
                     /translation="KYIDFKDLPDKWVGANLTEEELSLINKVKNHRSVYKFSDIATVE
                     VGIVTGANDFFLVNDHIVSKYKLDRFVYPMFGKSQHCKGIIYDNEQHFENKEKNLPTN
                     FIYLEDNESNLPLLVQTYIKEGEDAEYHKRYKCKIRKPWYKVPSVYSTNIGMLKRSHE
                     APKLILNKLGAYTTDTAYRIKSNKFQDEILVCCFLNPLTMILSELNGRFYGGGVLELV
                     PSEIRNLY"
BASE COUNT          251 a           81 c          126 g          222 t
ORIGIN      
        1 ctaagtatat tgatttcaaa gatcttcctg ataaatgggt tggggctaat ttaactgaag
       61 aagaattgag tcttattaat aaggtaaaaa atcatagatc tgtttataaa ttctctgata
      121 tagcaacggt ggaagttggt atagttacgg gagccaatga ttttttctta gttaatgatc
      181 atattgttag caagtataag ttagatcggt ttgtttatcc tatgttcgga aaaagtcagc
      241 attgcaaagg aatcatatac gataatgaac aacattttga aaataaagaa aaaaatttgc
      301 caactaactt tatttattta gaagataatg agagtaatct tcctttactt gtacaaactt
      361 atataaaaga aggtgaggat gcggagtatc acaaaagata taaatgcaaa ataagaaaac
      421 catggtataa agttccatcg gtttattcaa ctaacatagg aatgctgaaa agaagtcatg
      481 aagcaccaaa actaatattg aataaattgg gggcttatac taccgatact gcgtatcgta
      541 taaagtcaaa taaatttcaa gatgagattc ttgtgtgctg tttcctaaat ccattaacta
      601 tgattttatc tgagttaaat ggaaggtttt atggtggagg cgtattagaa ttagttcctt
      661 ctgaaattag aaatctatat
//
LOCUS       DANLXO010000244          678 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.251, whole genome shotgun sequence.
ACCESSION   DANLXO010000244 DANLXO010000000
VERSION     DANLXO010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.251"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..672
                     /locus_tag="PXD69_002746"
     CDS             <1..672
                     /locus_tag="PXD69_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL6284872.1"
                     /translation="CGKKDCPQMKKSKDYKDFLDALEKGDVDKADKIYNTKFSQFSKS
                     FGHEMEKNLEKNRIPPIYQGVPFDSFDLYQHYSYGNGEALNLSSVGLSNKIRPLVNKD
                     KAFGKSNGSIESRFISQYKNEGRTSFSNAYDFTKEASGIADPLWALGTATISGELKDI
                     QIFPGGIARGNIHYSIRDRFTDPFDTFNFTKGEWNPNGTPYIIQDSWIKSVRFSIDKK
                     IKITP"
BASE COUNT          250 a           95 c          128 g          205 t
ORIGIN      
        1 tgtggtaaaa aagattgtcc acaaatgaaa aagagtaaag actacaaaga ctttttggat
       61 gctttagaaa aaggggatgt tgataaagca gataaaatat acaatacgaa gttttcacag
      121 ttttctaaat cttttggtca tgaaatggaa aagaatttag agaaaaatcg tatacctcct
      181 atttatcagg gagttccatt tgattctttt gacttatatc agcattattc ttatggtaat
      241 ggagaggcat taaatctttc atccgttgga ttaagtaata aaattcgtcc tctagtgaat
      301 aaagataaag catttggtaa atccaatgga agtatagaaa gccgatttat ttcgcaatat
      361 aaaaatgaag gacgcacatc tttctccaat gcttatgatt ttacaaaaga agcatcgggt
      421 attgcagatc cgttatgggc gttaggaaca gctaccatta gtggagaatt gaaagatata
      481 caaatttttc ccggtggtat tgctagggga aatatccatt atagtatcag ggacagattc
      541 actgacccat ttgatacatt caattttact aaaggagaat ggaacccaaa tggaacacct
      601 tatattattc aagatagctg gataaaatcg gtacgatttt cgatagacaa gaagataaaa
      661 ataacacctt aattatga
//
LOCUS       DANLXO010000245          664 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.252, whole genome shotgun sequence.
ACCESSION   DANLXO010000245 DANLXO010000000
VERSION     DANLXO010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.252"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..464
                     /locus_tag="PXD69_002747"
     CDS             <1..464
                     /locus_tag="PXD69_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284873.1"
                     /translation="LERYQYNKSQLKSIVLMHEEIKNIVDKGILNKVKKPMWFIFFPT
                     SILLFIVMVKFNSLLSGIMLFLTMLIAYCNTKYWYFRTIRMKLSHFMELMPAKEIINN
                     SETKNILVIIEKCTFMNQKDEHIVDLDSIATGLNIIIRYNKFNHQFSAYKQ"
     gene            476..>664
                     /locus_tag="PXD69_002748"
     CDS             476..>664
                     /locus_tag="PXD69_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284874.1"
                     /translation="MNNKQILSIAQKFRQNHKDSHPFMLERGYVRIYQGKAYGWCAEQ
                     EDANTECPTALIVSLSNEI"
BASE COUNT          264 a           93 c          100 g          207 t
ORIGIN      
        1 acttggaacg ttatcagtat aataaatctc aattaaaatc aatcgttctg atgcacgaag
       61 agatcaagaa tatagttgat aaaggaattt taaataaagt aaaaaaacca atgtggttta
      121 ttttctttcc aacatcaata ttattattta tagtaatggt aaaattcaat tcattattat
      181 caggaataat gctatttctt acaatgttga tagcatattg caatactaag tattggtact
      241 tcagaacaat aagaatgaag ttatctcact ttatggagct aatgccagca aaagaaataa
      301 taaacaattc agagaccaaa aacattttag ttattataga gaaatgtaca tttatgaacc
      361 aaaaggatga acacatagtc gatttagaca gtatagcaac aggattgaat attataatta
      421 gatataataa attcaatcat caattttcag catataagca ataagaaaaa taattatgaa
      481 caataaacaa attttgtcta ttgctcaaaa atttcgtcaa aatcacaagg attctcaccc
      541 ttttatgcta gagcgtggtt atgttcgtat ttatcaggga aaagcctatg gctggtgtgc
      601 agagcaagaa gatgcaaaca cggaatgccc taccgcctta attgtcagct tatctaatga
      661 aatt
//
LOCUS       DANLXO010000246          655 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.253, whole genome shotgun sequence.
ACCESSION   DANLXO010000246 DANLXO010000000
VERSION     DANLXO010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.253"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            184..>655
                     /locus_tag="PXD69_002749"
     CDS             184..>655
                     /locus_tag="PXD69_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S ribosomal RNA methyltransferase Erm"
                     /protein_id="HDL6284875.1"
                     /translation="MNKNTKIKNKNFNIKDSQNFLHNTKLVEDLLFKSNITKEDFVVE
                     IGPGKGIITKALSKICKAVNAIEFDSVLADKLSHEFKSSNVSIIEADFLKYNLPDHNY
                     KVFSNIPFNITASILNKLLDSENPPLDTFLIMQYEPFLKYAGAPSYKESYKSLLY"
BASE COUNT          246 a           90 c           94 g          225 t
ORIGIN      
        1 ggtttttctc atgtcagtag agaatattct aacagtgtaa atataatctt aaaaatctta
       61 caagcttgaa gcctgataat ttcaggcttc tttcattttt aaatttccga acttgtagga
      121 attatacata aatcaaaaca attcttactt gacaaaatca gtctataatt gtaatatatg
      181 gatatgaata aaaacactaa aataaaaaac aaaaatttca acattaaaga ctcacagaat
      241 tttttgcata atactaaatt agtcgaagat ttgcttttta aaagcaatat aactaaggag
      301 gattttgttg ttgagattgg gcctggaaaa ggcataataa ccaaggcatt aagcaaaatc
      361 tgcaaagccg ttaatgctat tgagttcgat agtgtattgg ctgataagtt gagccatgaa
      421 tttaaaagtt caaatgtgtc tattattgaa gccgattttt taaaatacaa tttaccagac
      481 cataattata aagttttttc aaacattcca tttaacataa cggcaagtat tttaaataaa
      541 ttgttagata gtgagaaccc acccttagat acttttttaa ttatgcaata tgaacctttt
      601 ttaaagtatg cgggtgcacc atcttacaag gagtcttata aatctttatt atata
//
LOCUS       DANLXO010000247          644 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.254, whole genome shotgun sequence.
ACCESSION   DANLXO010000247 DANLXO010000000
VERSION     DANLXO010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.254"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>644
                     /locus_tag="PXD69_002750"
     CDS             <1..>644
                     /locus_tag="PXD69_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL6284876.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAKGFGRGLMSAGVGIAAGAAMARQPAKNQMEFDRQLAMASNTAFSDRDVKGRI
                     EGKKELLAAVQEAVKVGGGTKEDALLTLDTLIASGTMKAETAMSLLPTLQKGAVATGA
                     SSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGNFELADMARWLPQQMAAG"
BASE COUNT          184 a          129 c          190 g          141 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctctcaa
       61 aatgagctac gccgtgcctc agaagccact aagcaacggg tgcgagagct gaatgcagaa
      121 ttgggtaaga caagctttgg ggataaggct aaaggatttg ggcgtggttt gatgagtgcc
      181 ggtgtcggta ttgcagcagg tgctgcaatg gctcgtcagc cagccaagaa ccaaatggag
      241 tttgaccgac agttagcgat ggcatcaaac actgcctttt ccgaccgtga tgttaaaggg
      301 cgtattgagg gcaagaaaga gttattagca gcggtgcaag aggcggttaa ggttgggggt
      361 ggaacaaaag aagatgctct tttaactctt gatacgctaa ttgcctcagg aacgatgaag
      421 gctgaaactg caatgagcct attaccaacc ttgcagaaag gtgctgtagc aacaggtgca
      481 agctccgagg atatggcaaa aattgcgatc tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg ggcgggcatt ggatatggca gttgcagccg ggcaagcagg taactttgag
      601 cttgcagata tggctcgctg gctaccacaa caaatggccg cagg
//
LOCUS       DANLXO010000248          643 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.255, whole genome shotgun sequence.
ACCESSION   DANLXO010000248 DANLXO010000000
VERSION     DANLXO010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.255"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..493
                     /locus_tag="PXD69_002751"
     CDS             <1..493
                     /locus_tag="PXD69_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284877.1"
                     /translation="ARPLNTLEVKGLTVVDDSQKPLFSEVNQALYHGLSPIEVVASRV
                     QITRAITTYTKNVTNTDDPSYLDLTTIRTLDYVRKAIQTRQRLRFPRAKNSHRIVAKV
                     RSEILDVLYQLEGEEVIENVEAWKNRLLVVRNQDPTYLDLEIPADVVNGLHVIRNKIT
                     LIL"
     gene            504..>643
                     /locus_tag="PXD69_002752"
     CDS             504..>643
                     /locus_tag="PXD69_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284878.1"
                     /translation="MSIVYEGSCVLEVDGVEIEITKLDVKTVTGRKLVKTMNSSGRAR
                     GYS"
BASE COUNT          182 a          127 c          160 g          174 t
ORIGIN      
        1 ggctcgcccg ttaaataccc ttgaagttaa aggcttaacg gtcgtagatg actcgcagaa
       61 accgttattt agcgaagtaa accaagcgtt atatcacggt ttaagcccga ttgaggtggt
      121 ggcaagccgt gtgcagatta cccgtgcgat tactacatac accaaaaacg tgacgaatac
      181 tgatgaccca agctatttgg atttaaccac cattcgtacg cttgactatg tgcgtaaggc
      241 aatccaaacc cgtcagcgtt tgcgtttccc tcgtgcgaaa aactcccacc gtattgtggc
      301 aaaagtacgc tcggagattt tagatgtgct ttatcagctt gagggcgaag aggtaatcga
      361 aaatgtggaa gcgtggaaaa atcgcttatt agtggtgcgt aatcaagacc cgacttactt
      421 ggatttagaa atccctgcgg atgtggttaa tggcttgcac gttattcgta acaaaattac
      481 gttaatttta tagggggtgc tagatgtcaa ttgtttatga aggctcttgc gtgcttgagg
      541 tagatggcgt tgagattgaa attaccaaac ttgatgtaaa aaccgtaacc ggtcgcaagc
      601 tggttaaaac gatgaacagt tccggacgtg caagaggtta ttc
//
LOCUS       DANLXO010000249          640 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.256, whole genome shotgun sequence.
ACCESSION   DANLXO010000249 DANLXO010000000
VERSION     DANLXO010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.256"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(19..303)
                     /locus_tag="PXD69_002753"
     CDS             complement(19..303)
                     /locus_tag="PXD69_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010128390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284879.1"
                     /translation="MANITLSHITPKHFFETVRLLKMQEHRIYIGVDSIEVRFKQKRF
                     ESKKETDKRLEQLEHFMLFLQEIINSDIPIDLDEFIYTYHRSVRRGFYRR"
     gene            complement(321..482)
                     /locus_tag="PXD69_002754"
     CDS             complement(321..482)
                     /locus_tag="PXD69_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HDL6284880.1"
                     /translation="MEKIENSSNLVLKLSLENQMLILESLEHPKEPNLVMLEALKKYS
                     LYVAKTSNK"
BASE COUNT          199 a          112 c          102 g          227 t
ORIGIN      
        1 cactcctctt tcacatcact aacgtcgata aaaacctctc cttactgacc tgtgataggt
       61 gtatataaac tcatctaaat ctataggaat atctgaatta atgatttctt gtagaaagag
      121 cataaaatgc tctaactgtt ctagtctctt atctgtttcc ttttttgact caaaacgctt
      181 ttgcttaaaa cgaacttcta tcgaatctac accgatgtaa attcgatgtt cctgcatttt
      241 gagtagtcgg acagtttcaa aaaaatgttt aggggtgatg tgagaaaggg ttatatttgc
      301 catagtttag cttgaaaacg ctatttatta cttgttttag caacatacaa agaatacttt
      361 tttaaagcct ctagcattac taaattaggc tctttaggat gttctaagct ctcaagaatt
      421 agcatttgat tttcaagaga aagctttaga acaagatttg aactattctc tattttttcc
      481 attttaatta tctcattaga tgactttcgc ataacaacag gttatgtgta aattctcgtg
      541 cagtgggaca agcccgattg tactgcactc gaattgtaac ataacctgta ggacattatg
      601 cgaaaattaa taatataagt ttttcatcaa tcggcggtat
//
LOCUS       DANLXO010000250          638 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.257, whole genome shotgun sequence.
ACCESSION   DANLXO010000250 DANLXO010000000
VERSION     DANLXO010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.257"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
BASE COUNT          202 a           96 c          106 g          234 t
ORIGIN      
        1 acttttcaaa tcaaaaaaat taatgattaa tcccttcttg tttggatagt tactctattt
       61 ttgaagaaca ttccgtattt ttaatgatgt tttataagca ggatataaaa tttttaatat
      121 ttcaaataaa aagtgagcta aaaaagattt taactcactt tcatttcgta ggctcaaatt
      181 agacctacta cgccgatata aaaagttggt ctttttatat caaagctaag ctcttaacaa
      241 cgagtagtag attctctaat atgtttagct gtaactttca ttggcttttg ttgcgctgta
      301 gtgtttttca tattgttctc cagattttgt gagtaattag taagaccttt tcttttgaaa
      361 aggaccgagc tttcaaagtg gtctgattac ctattgagca atcagcttgc ttttcaagcc
      421 ccatgtcatt atatcataac cattgttttt agtcaatacc attttgggga atgcatggaa
      481 ggcgagtaca aattgaaggc tgatgtcacg atctatcatg atacgcctta tacaaaagtt
      541 ctctttggaa gtacatatat tgagatttta gacgatgacc agtattactt ttcgatttta
      601 gaaaaacgaa gatggaagtt agaaaattta cctgatga
//
LOCUS       DANLXO010000251          624 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.258, whole genome shotgun sequence.
ACCESSION   DANLXO010000251 DANLXO010000000
VERSION     DANLXO010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.258"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            17..256
                     /locus_tag="PXD69_002755"
                     /pseudo
     CDS             17..256
                     /locus_tag="PXD69_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
     gene            complement(455..>624)
                     /locus_tag="PXD69_002756"
     CDS             complement(455..>624)
                     /locus_tag="PXD69_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL6284881.1"
                     /translation="IENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIF
                     LLKQLVKGGLG"
BASE COUNT          213 a          101 c          124 g          186 t
ORIGIN      
        1 aattaaggag ccttatatga aattcaaaaa attagcatta gcagcaatgt taggtggctt
       61 atttgtaaca gctaatgcgg cagaattacc taatatcact attttagcga caggcggaac
      121 gattgctggt agtcagcaga atgcaaatag tagtgcttat caagcagggc aattgaatat
      181 cgaaacctta attgaagcag tgccagaaat gaaaacattg gcgaatatca aaggtgagca
      241 gattgtgaaa attggcccac taaagccttg ttagatgtag gctatcaagg tattgtcgta
      301 gcaggtgttg gtaacggcaa tatgagtgcg gaaaatcttg cattatttag aggaagccaa
      361 caatattttt aagattttta ataaacgtta aagcatataa aaaatggcat aagtgagtca
      421 cttatgccat tatttttggg gctgtcctag ataactaacc taacccccct ttaaccaatt
      481 gttttaaaag gaatatttga gattttaagt cactgtgatt aaaacgccat tcgcattctt
      541 tcaaatatag ctcaaaatgg gctttcggaa taccattaaa cttgcgtaaa tgacgttttg
      601 cttgactcca aaaattctca attc
//
LOCUS       DANLXO010000252          618 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.259, whole genome shotgun sequence.
ACCESSION   DANLXO010000252 DANLXO010000000
VERSION     DANLXO010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.259"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
BASE COUNT          213 a          110 c           87 g          208 t
ORIGIN      
        1 acttcccact ggctataaag ccttatatat caaggcttct agcaaatcag tgggtaaagt
       61 gggtaaaatt tcaaaaagtt ttaaattttt tcttttattc aaaaataaaa tttcccaaga
      121 actaattttt agctacggcg atagctcgaa atatctgttt ataaaataac ctaattaata
      181 aggcactttg gattttagtt atatcctgaa aaatcaaatt ataaagaaac cttatctatc
      241 aatacttgaa gccattaagt tcaagtctcg accaggcacc atttgactaa atttagttca
      301 acagagctaa acgaaaaaac cttagaaagc ctgtaaaatc aacgtttaca ggcttttttg
      361 ttgttttagc tcaatggcac taaacatttc atatcgcaaa ttttaagtag cctagcaaat
      421 tttccgccaa atatgaccgc ttgtaatgcc gttaggttat tgcctggcgg cctttttgtt
      481 acagctctta tattttttac accaaagttc agaaaaagtc acttttatca ctaacattaa
      541 gatgaaacct tgatacaaag cttgggcttc ggtgatattt aaaaaatatc acttttttca
      601 ataattgtga caaatctc
//
LOCUS       DANLXO010000253          595 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.260, whole genome shotgun sequence.
ACCESSION   DANLXO010000253 DANLXO010000000
VERSION     DANLXO010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.260"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(357..432)
                     /locus_tag="PXD69_002757"
     tRNA            complement(357..432)
                     /locus_tag="PXD69_002757"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(397..399),aa:Ala,seq:tgc)
     gene            complement(489..565)
                     /locus_tag="PXD69_002758"
     tRNA            complement(489..565)
                     /locus_tag="PXD69_002758"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(529..531),aa:Ile,seq:gat)
BASE COUNT          159 a          139 c          102 g          195 t
ORIGIN      
        1 attgccaagg catccacctt gtgcgcttag tcacttaact atacaacctc aaatgttttc
       61 taaaacttct caaaaataaa agtaaaaaaa caatgaagtc agttttacaa ctaaacactt
      121 gactgctttt gttcagtcaa gattttttct actcagactt tcaatttatt cgttatcact
      181 tatgtataat tacttatgcg taacgaactt gaaatatctc tcagtttttc agcttgtttc
      241 catattgtta aagaacaaag ataatggctt tcgcctatca tcatacctaa aattgcaaat
      301 aatccggtat ttttaaccgc ttgtaatctt aggtatgatg ataaagtcac gatgattggt
      361 ggagataagc gggatcgaac cgctgacctc ctgcgtgcaa ggcaggcgct ctcccagctg
      421 agctatatcc ccatttcatc ttccgttttc ttcactcata gtcgcttcgc tttcgcttgc
      481 cttctgagtg gtgggtctga gtggacttga accaccgacc tcacccttat caggggtgcg
      541 ctctaaccac ctgagctaca gacccaacgg atgaccttcg gttttttgtc ttctt
//
LOCUS       DANLXO010000254          593 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.261, whole genome shotgun sequence.
ACCESSION   DANLXO010000254 DANLXO010000000
VERSION     DANLXO010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.261"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..>593)
                     /locus_tag="PXD69_002759"
     CDS             complement(<1..>593)
                     /locus_tag="PXD69_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL6284882.1"
                     /translation="RILVDAYYEDGTTGGGEFVADLQDLVTPDDGGVCFVVNNNGGRW
                     KRVDLSHLTLFDFWAVGDGVTNDESAFVNAMRYSQFFIENGTFRINNAVNSVRDNVKI
                     LGNKTGKLVLGAGIQQAGAEVFNINHSNYFISGFCIETPNKAIGIRFKSLDDAGVKNL
                     HIDNVVFNGTFYGVRAGESIQADTNYPTDNVIVQNCQS"
BASE COUNT          193 a          150 c           89 g          161 t
ORIGIN      
        1 gattggcagt tttgtacaat cacattatca gttgggtaat tagtatccgc ctgaatactt
       61 tcacctgccc tgaccccgta gaaggtgcca ttaaacacaa cattgtcaat atggagattt
      121 ttaacaccag catcatccaa agacttaaat cgaataccaa ttgctttgtt cggtgtttca
      181 atacaaaaac ccgagataaa ataattgctg tgattaatat taaaaacttc ggcccctgct
      241 tgctggatac ctgcacctaa tactaatttg ccggtcttat tgcccaaaat tttcacatta
      301 tcgcgaacag aattaacggc attgttgata cgaaatgtac cgttttcgat aaaaaattga
      361 gaatatctca tagcatttac aaatgctgat tcatcatttg ttaccccgtc accgacggcc
      421 caaaaatcaa ataatgtaag atgtgaaagg tcaacacgct tccaccgccc cccattatta
      481 ttcacaacaa aacaaacccc accatcatca ggcgtaacta aatcctgcaa atcagccaca
      541 aactccccac cgcctgttgt gccgtcctca tagtaagcat ccaccaaaat acg
//
LOCUS       DANLXO010000255          575 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.262, whole genome shotgun sequence.
ACCESSION   DANLXO010000255 DANLXO010000000
VERSION     DANLXO010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.262"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>575
                     /locus_tag="PXD69_002760"
     CDS             <1..>575
                     /locus_tag="PXD69_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL6284883.1"
                     /translation="SSNLWSILKELYYPYNSYSFSVLPSDLLGRIYEQFLGDELVVNN
                     NELILQPKDYNLNRDIISTPNFIIRRIIDYTVNEYCKGKNDSNIYQSKFADIACGSGA
                     FLLEVYQRLQDILVDYYIQNDKNKLEETGVNQYKLRFEDKKNLLLNCVWGVDKDFNAV
                     KACRFGLLLKLLENESDVTIANKISILPNLD"
BASE COUNT          220 a           67 c           95 g          193 t
ORIGIN      
        1 caagttcaaa tttatggtct attttaaaag agttatatta cccttataat tcatattcat
       61 tttcagtatt accatcagat ttgcttggta ggatatatga acaattttta ggtgatgagc
      121 tggttgtaaa caacaacgaa ttaatactcc aaccaaaaga ttataattta aatagagata
      181 ttattagcac acctaatttt attattcgaa gaataattga ttatacagtt aatgaatatt
      241 gtaagggtaa aaatgattct aatatttatc agagtaaatt tgcagatata gcttgtggat
      301 caggcgcatt cttactagaa gtgtatcaaa gattacagga tatattagtt gactactaca
      361 tccaaaatga taaaaataaa ctagaagaaa ctggtgtaaa tcaatacaag ttacgttttg
      421 aagataaaaa gaacttatta ttaaattgcg tttggggggt agataaagat ttcaatgcag
      481 taaaagcctg tagatttggg ttgcttctaa aattactaga aaatgaaagc gatgtaacaa
      541 tcgctaataa gattagtatt ctgcctaact tagat
//
LOCUS       DANLXO010000256          553 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.263, whole genome shotgun sequence.
ACCESSION   DANLXO010000256 DANLXO010000000
VERSION     DANLXO010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.263"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
BASE COUNT          250 a           82 c           46 g          175 t
ORIGIN      
        1 atataattat ctttaatgta ttaatatcct tatattcaga atatatgtgc atgataacac
       61 taaaacaact ataataaatt ataaaaacac agataaaatt aataaattta aaatcaaact
      121 ctaagtaaga taatatcttt aaaagagaca cccagctata ataataagat atatattcat
      181 tatacaataa agatagcgta tctagatctt ttatttcatt aaaaaacaag aaataatgat
      241 atatatcccc agtttcatta gttctattat atagaaatgc taccattgcc aatgaatagg
      301 ataagttaaa gaaaaatatc tttatacgat tctcattaag attgcgtgat aaaaagaaat
      361 aaagcccacc caaatataag cctaatatag ggaaaacaaa attaaaaacg gaaaaaaaat
      421 aaatcataca aaagccttaa gctaacaaat caaatttcta tttcactata tgtatcaatc
      481 cctaactctt caaatagtct atatgcatta ttaatatcat cacaactttc acttacactt
      541 aactttatta tac
//
LOCUS       DANLXO010000257          546 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.264, whole genome shotgun sequence.
ACCESSION   DANLXO010000257 DANLXO010000000
VERSION     DANLXO010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.264"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            82..378
                     /locus_tag="PXD69_002761"
     CDS             82..378
                     /locus_tag="PXD69_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284884.1"
                     /translation="MPFDCQGAFWLGYYQYCKLSNDVKNYTSKELSIIGESLYGTQWQ
                     SNLARDLRLSDARRVREWVAGERKIPFGVWADLTELVKAKKANLSSILKKLTID"
BASE COUNT          179 a           97 c          122 g          148 t
ORIGIN      
        1 agagagctat ctattaacaa tggagagata gcaagattaa tggataaaat accaggcgac
       61 ctcgaggacc ctaaagacgg gatgcctttt gattgtcagg gggcgttttg gcttggatac
      121 tatcaatact gcaaattaag taacgatgta aaaaattaca catcaaaaga gctatccatc
      181 attggcgagt cattgtatgg cactcaatgg cagtctaatc tagcgagaga tttgagatta
      241 tctgatgctc gccgtgtccg cgaatgggtg gctggtgaac gtaaaatccc tttcggggtt
      301 tgggctgatt tgaccgaatt ggttaaagcc aaaaaagcta acttatcatc aattcttaaa
      361 aaattaacaa tagattagca ctgattttaa agcccctctc ggggcttaat tatagaaaat
      421 aaaatcacaa tggctaattt tgccaaattt gcctgttaaa acgtgcgaaa aattacaaaa
      481 aacggctaga gctatagccg ttttgagtgc agatgttaac agagttaagc tctagcacgt
      541 cctggg
//
LOCUS       DANLXO010000258          524 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.265, whole genome shotgun sequence.
ACCESSION   DANLXO010000258 DANLXO010000000
VERSION     DANLXO010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.265"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..237)
                     /locus_tag="PXD69_002762"
     CDS             complement(<1..237)
                     /locus_tag="PXD69_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HDL6284885.1"
                     /translation="MNLVDYSTSLWSVLPALIALILAIVTRKVIISLSIGILFGAFML
                     TNSNFLDALTYIKNSVVSLVYKGAEEGLNSNNVNI"
BASE COUNT          194 a          108 c           75 g          147 t
ORIGIN      
        1 aatgttaaca ttatttgaat ttaatccttc ttcagcccct ttataaacta aagaaacaac
       61 gctattttta atataagtaa gtgcatcaag aaaattgcta ttagtaagca taaatgcacc
      121 aaagagaata ccgatgctaa gtgaaataat caccttgcgt gtcacaattg ccaatattag
      181 cgcaatcagt gccggcaata ccgaccaaag tgacgtagaa taatcaacta gattcataaa
      241 acctctaaaa tgactgtgta taatttgtat aaataagaat agccaaacaa gagatctact
      301 gggatattta taaaaataaa tatgaaagga aggcaaatgt gaaatatctg aaacccaccc
      361 taacagtagc actccgtagc atttactacg acagtgtcgt ttctttcgac aacgacccca
      421 accaattaag atgacgctta attgatttcg gcaaattcac ctttccttcc ccttcatcgt
      481 tttccactca gaagaaatac ttattgaatt cgcacctcta caat
//
LOCUS       DANLXO010000259          521 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.266, whole genome shotgun sequence.
ACCESSION   DANLXO010000259 DANLXO010000000
VERSION     DANLXO010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.266"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..>521)
                     /locus_tag="PXD69_002763"
     CDS             complement(<1..>521)
                     /locus_tag="PXD69_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EpsG family protein"
                     /protein_id="HDL6284886.1"
                     /translation="GCGLCVIGVGFHPSAIIIIICLGISRFLKFRKVYLYVSSLIGVF
                     PFLLISILSLLNIPFLEHKTNEYIYGQWASYKFESNIEYIVMMAVYSFVFFVFFSVNK
                     LDCNYFRSRYSSRIINFMLFYFTVSLFFIQFKTLSDRFMFSAGGILLISLSYFIFYSR
                     VLYRRSLLNFILL"
BASE COUNT          245 a           89 c           57 g          130 t
ORIGIN      
        1 taaaagaata aaatttaata aactccttct ataaaggact ctggaataaa aaataaaata
       61 ggaaagtgaa atcaacaata tccctcctgc gctaaacata aatctatcag acaaagtctt
      121 aaattgaata aagaacaatg aaacagtaaa atagaaaagc ataaaattaa taatccgact
      181 actataccta ctccggaaat aattacaatc aagcttatta acagaaaaga atacaaaaaa
      241 aacaaaagaa taaactgcca tcatgacaat atactctata tttgactcaa atttatagct
      301 tgcccattgc ccataaatat attcatttgt tttatgttcc aaaaaaggaa tattcaataa
      361 agaaagaata gatatcagta aaaaaggaaa aacaccaatt aaagaagaga catacaggta
      421 tactttccta aattttaaaa accgagaaat ccctaaacaa attataataa ttattgcact
      481 aggatgaaat ccgacgccaa ttacacatag cccgcaccct t
//
LOCUS       DANLXO010000260          515 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.267, whole genome shotgun sequence.
ACCESSION   DANLXO010000260 DANLXO010000000
VERSION     DANLXO010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.267"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            21..>515
                     /locus_tag="PXD69_002764"
     CDS             21..>515
                     /locus_tag="PXD69_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284887.1"
                     /translation="MKNVHTKYDHKAVKHGFAIAIQNSVNYLYEIAERQPPCNFELCW
                     KNCAAHYLAIKSAESNNERDLNLFLDYINEPKDSTFTVAPLYKDNTLETRMILEIIKD
                     DNQIGFGFCEASDLSLIEDETKKIKAAMSLIDDLDPDTSNEIKCFIDTIYLTKEGLNG
                     ERFMR"
BASE COUNT          192 a           64 c           93 g          166 t
ORIGIN      
        1 tttaacaaat tgaggttttt atgaaaaatg tacatacgaa atatgatcat aaagcagtga
       61 agcatgggtt tgctatagca atccaaaatt ctgttaatta tttatatgaa attgcagaac
      121 ggcagcctcc ttgtaatttt gaactatgct ggaagaattg tgcagcacat tatttagcaa
      181 taaaatctgc agaaagtaat aatgaaaggg atttaaattt attccttgat tatattaatg
      241 agccgaaaga ttctacattt acagtagctc ctttatacaa ggataataca ctagaaacaa
      301 gaatgatctt agaaattatt aaagatgata accaaattgg gtttggattt tgtgaggcta
      361 gtgatttatc tttaattgag gatgaaacta aaaaaatcaa ggcagcaatg agcttaattg
      421 atgatttaga ccctgatact tctaacgaga taaaatgttt cattgataca atttatttaa
      481 caaaagaagg ccttaatggc gagcgattta tgcgt
//
LOCUS       DANLXO010000261          508 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.268, whole genome shotgun sequence.
ACCESSION   DANLXO010000261 DANLXO010000000
VERSION     DANLXO010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.268"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..296
                     /locus_tag="PXD69_002765"
     CDS             <1..296
                     /locus_tag="PXD69_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284888.1"
                     /translation="DTRYNKNGQGAVSERNIIDAKNRFKASHPYAKIISCVRGSETYV
                     TRPAKANATTKSVKEKQSQPQESSSLSSMLLGAAVTAGVGFVANKWFSKKDNT"
     gene            324..>508
                     /locus_tag="PXD69_002766"
     CDS             324..>508
                     /locus_tag="PXD69_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284889.1"
                     /translation="MAGLLPPYFKKKNSDHYKDAVKQFGKEQVDEVIAQCDELESWVK
                     EMPTKQLIMYVGCFHTF"
BASE COUNT          187 a           78 c           99 g          144 t
ORIGIN      
        1 cagataccag atataacaag aatgggcaag gtgctgtttc tgaaagaaat attatagatg
       61 ctaaaaatcg ttttaaagcg agccatccat acgcaaaaat tatttcttgt gttagagggt
      121 ctgagacata tgtaacacgt ccagcaaaag ctaatgctac aacaaaatct gtcaaggaaa
      181 agcaatctca accacaagaa agttcatcgc tcagttcaat gttacttggt gcggctgtaa
      241 ctgctggggt tggttttgta gccaataaat ggtttagcaa aaaagataac acttaattta
      301 tctctaacca atgtggagta aaaatggctg gattattacc accttatttc aaaaagaaaa
      361 atagtgatca ctataaagat gctgtaaaac aatttgggaa agaacaagtt gatgaggtta
      421 tagcacagtg tgatgaactt gaatcttggg taaaagaaat gccaacaaaa caacttatta
      481 tgtatgttgg ttgtttccat acttttaa
//
LOCUS       DANLXO010000262          502 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.269, whole genome shotgun sequence.
ACCESSION   DANLXO010000262 DANLXO010000000
VERSION     DANLXO010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.269"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
BASE COUNT          167 a           77 c          103 g          155 t
ORIGIN      
        1 tgatcagaat tagattaaag ggagaatgaa atgaaagaac catcaatttt acaattaagc
       61 ttagtagttg gagggaattc tgaaaataag gctaatcaac cagatcttgt atcttatggc
      121 gttgcttttg ctacagggtt tgcaagaggg gggctttagg cggtttatcc agtacttctg
      181 ttaatttagc ccttgattta gcgaggagcc tacctattac aatacatgaa aattctttac
      241 ctagcggtgt aaaagaatta attccatcat ctttaccaat aaagcctacg tttggagttc
      301 caggtagaac gaataataac caatctggct caaactacga ttgtggtgat ggtacagatt
      361 atcaaggcta gtggagatga aaatgaaaat tcaatttcca atttcttatc aagaatttcg
      421 tgaaagttat tctgagaaac aaccactttt aatgaaaggt gctatagagt agcaagattt
      481 actttcttgg aaggctatca at
//
LOCUS       DANLXO010000263          490 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.270, whole genome shotgun sequence.
ACCESSION   DANLXO010000263 DANLXO010000000
VERSION     DANLXO010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.270"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..376
                     /locus_tag="PXD69_002767"
     CDS             <1..376
                     /locus_tag="PXD69_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL6284890.1"
                     /translation="HDYHIVPISDSLYPHIERLIQELKIHKQTDDCQLFNLNLFSRYT
                     RRKGQPMSQNQLTHIFRHISDLVGFTSSPHRFRHTVATQLMKKPENVYVVKKLLGHKD
                     ISVTLGYIEYDVEMLRDTVNLL"
BASE COUNT          171 a           81 c           83 g          155 t
ORIGIN      
        1 ccatgattat catatagtac cgatatccga ttcactttat ccccatatag aaaggctgat
       61 tcaggagtta aagatccata aacaaacgga tgattgccag ttatttaacc tcaatttatt
      121 ttctcgttat actcgtagga aaggtcagcc gatgagccaa aaccagctta ctcatatatt
      181 taggcatatt tccgatttgg ttggcttcac gtcatcacca catagatttc ggcatacagt
      241 agctactcaa ttgatgaaga aacctgaaaa tgtttatgta gttaagaaat tattaggtca
      301 taaagatatc agcgttacat taggatatat tgaatacgat gtggaaatgc tacgagacac
      361 cgtgaactta ctctaataaa agagaaatga gagaaaacta ttctctcatt tattgtgata
      421 aataggaaac ttctgtctta ttttcagatg aattgatttt gagaacttta tcaaaatata
      481 agcgtaaata
//
LOCUS       DANLXO010000264          443 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.271, whole genome shotgun sequence.
ACCESSION   DANLXO010000264 DANLXO010000000
VERSION     DANLXO010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.271"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(75..>443)
                     /locus_tag="PXD69_002768"
     CDS             complement(75..>443)
                     /locus_tag="PXD69_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284891.1"
                     /translation="EFGELCGGIARNNPEMIKDAIGDLIVVCIIKAKQEKQPIYPVQF
                     ENHRLNGYRFDISVAVHCLYDIERIKDRGKYSRFFGILHHLALINRFTLNDCLAHAYD
                     QIKDRKGEMQAGIWVKEDDL"
BASE COUNT          133 a           86 c           79 g          145 t
ORIGIN      
        1 aagaagaaac cgaaactctt atagagtggc ggaatgcttt tctgcaagat gtttcggttt
       61 ttatagctta ggtactataa atcgtcttct ttaacccaaa tcccagcttg catttcgccc
      121 ttgcgatctt tgatttggtc gtaggcgtga gcgaggcagt cattaagcgt aaatctattt
      181 attaaggcta aatggtgtaa tatgccaaaa aaacggctat atttacctct gtctttaatg
      241 cgttcaatat catatagaca atgaacagcg accgaaatat caaatctgta accatttaat
      301 ctatgatttt caaattgtac agggtaaata ggttgttttt cttgttttgc tttaataata
      361 cagacaacaa tcaaatcccc aatcgcatct ttaatcattt caggattatt gcgggcaatg
      421 cctccgcaga gttcgccaaa ctc
//
LOCUS       DANLXO010000265          434 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.272, whole genome shotgun sequence.
ACCESSION   DANLXO010000265 DANLXO010000000
VERSION     DANLXO010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.272"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(222..>434)
                     /locus_tag="PXD69_002769"
     CDS             complement(222..>434)
                     /locus_tag="PXD69_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284892.1"
                     /translation="YKVLEFFLEKIDRNKYLSFIYDKLDSEMNEDKTFIMLVEDMSPP
                     YQNYLNTFPLSEFYFDKGMEHVFIDY"
BASE COUNT          157 a           70 c           45 g          162 t
ORIGIN      
        1 ccattgcttt tatatataga attctgataa atctgagcaa gcaactttag attttccaaa
       61 tgattaggat tcagtttaga tataaattcg ttataaaact cttgctcatt atatttctga
      121 atttgttctc caattccagc taatagccct gcaattacat cactagcttg aattaagcta
      181 ttatttacag aatcctcaaa agatatctta ttatgttgaa tttaataatc aataaaaaca
      241 tgttccattc ctttatcaaa ataaaactct gataaaggaa aagtgtttaa atagttttgg
      301 taaggaggag acatatcttc aactagcatt ataaatgttt tatcttcatt catttctgaa
      361 tctaacttat cataaataaa tgacaaatat ttattcctat ctatcttctc taagaaaaat
      421 tccaacacct tata
//
LOCUS       DANLXO010000266          377 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.denovo.273, whole genome shotgun sequence.
ACCESSION   DANLXO010000266 DANLXO010000000
VERSION     DANLXO010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.denovo.273"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            <1..>377
                     /locus_tag="PXD69_002770"
     CDS             <1..>377
                     /locus_tag="PXD69_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284893.1"
                     /translation="LVFLKGENGEYDFVYKNQRSELFEHQIYSPFLKRSDIPYFDDEY
                     HFKRWFYFEYQGFRRELSHLSEIHFYKNGGDVQNYPTREFDLIKKYLTNKGMYTSPQK
                     KNNEELNGFNKIKISNCKSIMVS"
BASE COUNT          152 a           44 c           59 g          122 t
ORIGIN      
        1 atttggtctt tcttaaagga gaaaatggtg aatatgattt tgtatataaa aatcagagaa
       61 gtgaactttt tgaacaccaa atatattccc catttttaaa acgctctgac ataccatact
      121 ttgatgatga atatcatttt aaaagatggt tttattttga atatcaagga tttagaagag
      181 agctatcaca cttatcagaa attcactttt ataaaaatgg aggagatgtc caaaactatc
      241 ctacgagaga gtttgattta attaagaaat atttaactaa taaagggatg tacacatccc
      301 ctcaaaagaa gaacaatgaa gaattaaatg ggtttaataa aattaaaatt agtaattgta
      361 aaagcattat ggtatca
//
LOCUS       DANLXO010000267         7749 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.guided.115, whole genome shotgun sequence.
ACCESSION   DANLXO010000267 DANLXO010000000
VERSION     DANLXO010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7749
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.guided.115"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            210..683
                     /gene="gpt"
                     /locus_tag="PXD69_002771"
     CDS             210..683
                     /gene="gpt"
                     /locus_tag="PXD69_002771"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL6284894.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            796..1419
                     /gene="gmk"
                     /locus_tag="PXD69_002772"
     CDS             796..1419
                     /gene="gmk"
                     /locus_tag="PXD69_002772"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL6284895.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            1509..2906
                     /locus_tag="PXD69_002773"
     CDS             1509..2906
                     /locus_tag="PXD69_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL6284896.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(3019..3864)
                     /locus_tag="PXD69_002774"
     CDS             complement(3019..3864)
                     /locus_tag="PXD69_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL6284897.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(4005..7100)
                     /gene="ttrA"
                     /locus_tag="PXD69_002775"
     CDS             complement(4005..7100)
                     /gene="ttrA"
                     /locus_tag="PXD69_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL6284898.1"
                     /translation="MNNKRRNLLKGGLALGGAAAFGAGYSPKVSEIAKGVMHGTSGEK
                     TRDAIHGNSLTPEYQVKDGKLLSNPEQIVCNTQCMGCWTQCGIRARVDLNTNQVIRIS
                     GNPYHPLSSDKTLPFGMPIAKAELLLAGESGIENRSTACARGAAFLEGVNSPYRITQP
                     LKRVGKRGEGKWQTISFEQLVEEIINGGNLFGEGEVEGLKTIRNLVDPINPKQPDLGM
                     KANQLLVTFAGPEGRQPILQRFAQKSFGTINFSNHGAYCGAAYRAGSGAFMKDFDNQQ
                     HAKPDWDHAEFILFIGTSPAQSGNPFKRQARQLAKRRPDDNFSYVVVSPRLEMTSSLA
                     TQNNHWVPIKPEGDLALVMGMLRWIIENERFNADYLSRPSLAAMENAGHVSYANASHL
                     IICEPNHPKFGQALRISDLQDVQLDPEEKVEENLIVVKDQASGELISAKDCLQAVIFV
                     EQIAKLLDGSEVLVKSSMQLLKEATQEKTLAEYSDICGVPVQTIENLAKKFTSHGHKA
                     NAITHGGTMHSTGFYTSWAILLLNAMVGNLNKKGGMAVAAGKFKDFGDGPRYNLANFP
                     NEVKPKGTNLARSKKAYQNSSEFKQKVTKGENPYPAQGAWYPFTGGQTTEMFTSMVQG
                     YPYFAKAWINHMANPVYGLTAMNPIALEKLKDPKILPLFVSIDAFMNETTALTDYIVP
                     DTHNFESWGFSTAWGGVPQRTSTARHPIVPSKNAKTAEGDTICMENFVIAVAKKMGLP
                     GFGENAIADLEGNRYPLHRTEDYFLRAAANIAFAGEKPAPDASEQDLLLTGVQRIMPK
                     IEQTLKAEERLKVANVYCKGGRFAPHESAWKEENMEFQWKNCLQIWNENVYKAQHHSN
                     GEHYWGCPRYMSPRFADGSTLEQHYPQSEWGFKLISFKSNIMSSITAPLLRLLSIKPE
                     GLVAMNRLDAEEKGIKHGDVVKLSTPTAGLTVQIVVLDGIARGTIGIEHGYGHKQIGA
                     SSYTIDGVEIPANPMIAKGINLNDLGIIDHTKAVKSPWVDWVCGSAVRNGIPAKVEKL
                     A"
     gene            complement(7090..>7749)
                     /locus_tag="PXD69_002776"
     CDS             complement(7090..>7749)
                     /locus_tag="PXD69_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase"
                     /protein_id="HDL6284899.1"
                     /translation="AWLQLPILQNQGLLWAFRLFATLTAIGIIGYTVLETYQTGTRTL
                     WHSAWLLPIMLFSAWAVALGLTQAVCKMLFHTQTNTGLWTKLCLILTALSLVGLAFSS
                     PQATQDFAQLFNGSITAYLVGIFWLIALICNFSAKNHRLQWLGVLALIAFGWLLRWVL
                     VIQVQTIAKTNALQNPYHFDWTAVDGGLGIVSIFGLTVLVSIVVWQLILIICGGRKGE
                     Q"
BASE COUNT         1984 a         1800 c         1821 g         2144 t
ORIGIN      
        1 tattgctgat ttttactctc gccaaaacaa ggaagtcttt ttcactttag aaaagctatt
       61 ttagtgttgg ttttttgtgc taagcatacg attgcgtagc tgccggcaca aaaaaataaa
      121 tgaaatgatg gcgaaaaaag cattttcggg ttatcctagt gcaatttttt atatcggggt
      181 agcccccaat tttatattag gttgtttcta tgagtgaaaa atacacaaat gaaaaatatg
      241 tcgtgacgtg ggatatgttc catatgcacg ctcgcaagtt ggcagaaaat ttattacctg
      301 ccacacagtg gaaagggatt attgcggtga gccgtggcgg cttgtttccg gcagccgttt
      361 tagcacgtga gttgggtatt cgccacgtag aaacagtgtg cattgccagc tacgatcacg
      421 atagccaagg tgagttaaat gtgttacacg cagccgatac cgatggcgaa ggctttattg
      481 tggtagatga tttagtggat accggcaaca cggcaaaaga aattcgcaga atgtacccga
      541 aagctcgttt tgtaaccgtg tttgcgaaac cgcacggtgc accgttggtt gatgattatg
      601 tgattgatat tccacaagaa acgtggattg agcagccttg ggatttaggc attaccttcg
      661 ttcagccttt ggcacgtaga taattttgtg taatggacaa tgaaagttgt ccattatttt
      721 ttatttattc ctatgaaatg taggggcgaa tcatcattcg ccctattccc aaaatcaaat
      781 aggtatatac aaataatgag tttaggcaat ctttatatta tttctgcccc aagtggagca
      841 ggaaaatctt ccttaattaa cgccttgttg gcggatttac cccgttcgga agtacagctt
      901 tcgatttcac acactacccg tcagcctcgt ccggcagaac aggacggcgt gcattattat
      961 ttcacttcgc acgatgagtt taagcagctg attgagcaag ggtatttttt agaatgggcg
     1021 gaggtgtttg gcaattatta cggcacatca ttgccgatga ttgaacgtag cctagagcag
     1081 ggcattgatg tctttttgga tattgactgg caaggggcta gacaaattcg ggaaaaagtg
     1141 ccgaatgtga aaaccgtttt tattttgcca ccgtcaaaaa cagaattgga aaaacgttta
     1201 atcgggcgtg ggcaagattc cgctgaaacc attgccaaac gtatggcaga ggcggtgtcg
     1261 gaaatgaacc attacaatga gttcgattat gtgattatta atgatgattt ccaacaggca
     1321 ttggcagagc taaaagcgat tttaattgcc gagcgtttga gcttaggttc gcaacaaatt
     1381 cgtcatcagc atttgattac tgatttgtta aataattaaa tgaacagttg ttcatttaac
     1441 tggaaaggca atctgttttt gggtagaata cgcccatttt cccctcttta ttttcaaaag
     1501 gaaatgtaat gaaactttca aaattagcat tttctgtggc gttggctcta accgtaacgg
     1561 cttgtaccac agggaatatg agcaatgacg ggactttgca acaagcacag caaacctatc
     1621 aaagctatga tgaaattacc aaacaatatc aaattaacga gcaatggtgg caaggctata
     1681 cggatgcgga attaaaccgt gtggttgatt tagccatcaa aaataacctt gatttagcca
     1741 aaagcggaat tgcagtcaat aaagccttgt ataacgctaa tttagtaggg gcaaatttag
     1801 tgccaacctt tagtggttca ggttctgttt ctgcggctaa aggtttaggt tcggcttctt
     1861 caaataatgt ttcgaccggt gtttcaacaa ccgcagctca agctgcattt aatttaagtt
     1921 atactgtgga tttatggcga cgtttagccg ataccgccag tgcggcagaa tggacgcata
     1981 aagccaccat tgaagactta aaagctaccc gtttatctat tattaatgcg gttgtgacta
     2041 cttactacca gttagcttac tatcgtgatg cgattcgtat taccgaagag agcattcgcc
     2101 attatgagca aatcagccgt attttaacta acaaaatgaa tgccggtgcg attgatagtt
     2161 tagcggttga tcaggctcaa caagcggtct taaacgccag aaatagtgta attgatctga
     2221 aaaccaacca aaaaattgcc gagcaaacat tacgcaattt gttaaatgtt cagccaaata
     2281 ctccgcttaa cattcgttac ccgaatatta tgagcgtgaa attgcaaggg gtagatttaa
     2341 atgtgccagt gtcagccatt gctaatcgcc ctgatgtagt aggctcgtta caacgcttac
     2401 aaagtgcatt taaaacctta accgcaaccg agaaaagctg gttcccaacc ttaaccatcg
     2461 gtggttctat taccggtagt gcaaccaata tcggcaatgt ggcagataac cctgtgggta
     2521 acggcttaat taaattggat ttaccgttct tagattggaa tcgggttaaa aataacgtaa
     2581 aaatttctga aacggattat gtgactgccc gtttaaacta tgagcaaaaa attacctcag
     2641 ccttaaatga aattgaccgt tattattaca gttatacgca gtcgagaagc tcgttaaaaa
     2701 tccttcaaga taccaatgcg aaaaataaac gtatcagttc atactataaa aaccgttatg
     2761 aacaaggggt gtcggagttc cgtgagtgga ttaccgcact gaataccgag cttaattctc
     2821 agttggcgat tttaaatgca aaatatgcga ttttgaccaa cgagaatgcg gtttaccaag
     2881 caatggcagg taaatacaga agataattat atctaaaact atatactatg gttggtaaaa
     2941 gtgggttaag gcttgatggc ttaacccgct tcgctattta ttgctactta aaccattttg
     3001 gtaatgttag tttagctact agaacttaat cacatcaccg tttttcggca cagttacacg
     3061 atttaatccc tctttttgta cataatcacg catctgatca ctgctgattg aggtttgtgg
     3121 cagggcgtcc atatgcacag ttaagatttt cgcttgtgga gcgattttgt gtgctttgga
     3181 aacatcttcg gtacacataa tcgggctgcc ttcaaagttt ggtagtttgg cacagccggc
     3241 attcagcacc acaaagtctg gtttgtaagt gttgaacgaa tgttcgattt cgtggttcca
     3301 aatggtatct cccaccaaat agacggtcgg tttgccttcc gctttcatca ctacgtccat
     3361 cgcatcgccg accatttcgg caattttcgg gttcgcatac atcgcatcgg tgccgtgctg
     3421 gccacgagtt cgggttaagg ttacgccttc aaacggggta tctttgccga ccacacgcac
     3481 atcggtaaag ccttgtgaac ggattaaacg ggcatcaccg gcattctgca caaaaatcgg
     3541 cagatttttc ggcacacgtt gttgtgctac atcgtcccag tgagcgtggt gagtgtgagt
     3601 tacgatcacc gcatccacgc catttaacac ttcatcaatg ctcacagtca tatccaaggt
     3661 cggattacgt tttttcgcat tcggcggtaa gtagcgatct ttctccgcta aatacggatc
     3721 aaccaaaaac gtcttgccgg catattcaat tttcgccgtt gcattacgaa tatgttggta
     3781 ttggctctgc tcagcggcaa aacttgatgt agcgaaaagt gccgttgcaa tcaggctcag
     3841 tgctgttttt ttgacaaaag tcataggttc tccaaaataa attaaaatgc agagtatgat
     3901 tttttacgct ctgcaatgct ggtttgcata aggaacagtg tcccttacat caataaaagc
     3961 ggtcgatttt gcacattttt ctgcaaaacc aaccgcttgt tcggctaggc taatttctct
     4021 accttcgccg gaatgccatt tctcaccgct gagccacaga cccaatctac ccacggggat
     4081 ttgaccgctt tggtgtggtc gataatgccg aggtcgttga ggttaatccc tttggcgatc
     4141 atcgggttgg ctggaatttc cacgccgtca atggtgtagg aacttgcccc aatctgttta
     4201 tgaccgtagc cgtgttcgat gccgattgtg cctcgggcga taccgtccaa caccacaatc
     4261 tgcaccgtca agccggcggt tggggtgctg agtttcacca catcgccgtg tttaatgcct
     4321 ttttcttccg catctaaacg gttcatcgcc actaagccct caggcttgat cgagagcaga
     4381 cgcaacagtg gggcggtaat actgctcata atgttcgatt taaacgaaat cagtttaaag
     4441 ccccattccg actgcggata gtgctgctcc agcgtggagc cgtccgcaaa acgtggcgac
     4501 atataacgag ggcagcccca atagtgttca ccgttgctgt ggtgctgggc tttatacacg
     4561 ttttcgttcc aaatttgcag gcagtttttc cactggaact ccatattctc ctctttccac
     4621 gcactttcgt gtggggcaaa acgtccgcct ttgcaataca cattcgccac ttttaatcgc
     4681 tcttcggctt ttagcgtttg ttcaattttc ggcataatcc gttgcacgcc ggtgagcagc
     4741 agatcttgct cgctggcgtc cggtgcaggt ttctcaccgg caaaggcaat gttcgctgcc
     4801 gcccgtagga agtaatcttc ggtacggtgg agcggatagc ggttgccttc taaatcggca
     4861 atcgcatttt cgccaaagcc cggcaagccc atttttttcg ccaccgcaat cacgaaattc
     4921 tccatacaga tggtgtcgcc ttcggcagtt ttggcgtttt tggacggcac aatcgggtgg
     4981 cgtgcggtgc tggtgcgttg aggcacaccg ccccacgccg ttgaaaagcc ccagctctca
     5041 aagttgtggg tgtccggcac gatgtagtcc gtcagtgcag tggtttcgtt cataaaagca
     5101 tcaatagaga caaagagcgg tagaattttc ggatctttta atttctccaa cgcaatcggg
     5161 ttcatagcgg ttaagccgta aacggggttc gccatatggt tgatccacgc tttcgcaaag
     5221 tatggatagc cctgcaccat tgaggtaaac atctcggtag tttgcccgcc ggtgaacgga
     5281 taccacgccc cttgtgccgg atacggattt tcgcccttcg tcactttctg cttaaattcg
     5341 cttgaatttt ggtacgcctt tttactgcgg gcaaggttcg tgccttttgg cttcacttca
     5401 ttcgggaagt tcgctaaatt gtagcgaggc ccgtccccga aatctttgaa tttgcctgcg
     5461 gctactgcca ttccgccttt tttgttgagg ttaccgacca ttgcattcag caacaaaatc
     5521 gcccaactgg tataaaaacc ggtgctgtgc atcgtgccgc cgtgagtgat ggcattggct
     5581 ttatgaccgt gcgaagtgaa ttttttcgct aagttttcaa tggtttgcac cggcacgcca
     5641 caaatgtcgc tatattcggc aagggttttc tcttgtgtcg cctctttcag caactgcatt
     5701 gaggatttca ccaacacttc cgagccatca agcagttttg caatttgttc gacaaaaatg
     5761 accgcttgta agcaatcttt tgctgaaatg agttcgccgc ttgcctgatc ttttaccaca
     5821 atcaggtttt cttccacttt ctcttcgggg tcgagttgca catcttgcag atcgctaatc
     5881 cgcaacgcct gcccgaattt cgggtggttc ggttcgcaaa taatcagatg tgacgcattg
     5941 gcatagctga cgtggccggc attttccatc gctgccagac ttgggcggga gaggtagtca
     6001 gcattgaaac gctcgttttc gataatccaa cgcaacattc ccattaccaa cgccaaatcg
     6061 ccctcgggct taatcggcac ccaatggttg ttttgggtgg cgagggagga ggtcatctcc
     6121 aaacgagggg aaaccaccac atagctgaaa ttgtcatcag ggcggcgttt ggcaagctgg
     6181 cgagcctgac gcttaaacgg attgcccgac tgtgccggag acgtgccgat aaacagaata
     6241 aattcagcgt gatcccagtc cggcttggcg tgttgttggt tgtcaaaatc tttcataaag
     6301 gcacccgaac cggcacggta cgcagcgcca caataagccc cgtggttgga aaagttgatc
     6361 gtgccgaagc tcttttgggc aaagcgttgc aaaatcggct gacgaccttc ggggccggca
     6421 aaagtaacta aaagctggtt tgctttcatt cccaaatcag gctgtttcgg gttaatcgga
     6481 tcgaccagat tgcggatcgt cttcaagccc tccacttcgc cttcaccaaa taggttgcca
     6541 ccattgatga tttcctccac caactgctca aagctgatgg tctgccactt gccttcgccc
     6601 cgttttccga cccgtttcaa cggttgggta atccgatacg ggctgttcac cccctccaag
     6661 aacgccgccc ctctagcaca ggcggtggag cgattttcaa tgccactttc gcccgccagc
     6721 aacagttccg ccttggcaat cggcataccg aacggcaggg ttttgtcgga ggaaagcggg
     6781 tgatacggat tgcccgaaat gcgaatcact tggttggtgt tcaaatccac cctcgcccga
     6841 atgccacact gcgtccaaca gcccatacac tgtgtattgc acacaatttg ctcaggattg
     6901 ctgagcagtt tgccgtcttt tacctgatac tccggcgtga gcgaattacc gtgaattgca
     6961 tcacgggttt tctcgcccga tgtgccgtgc atcacccctt tggcaatctc cgacaccttc
     7021 ggcgaatacc cggccccaaa cgccgccgcc ccaccaagtg ccagcccgcc tttcaacaga
     7081 tttctgcgtt tattgttcac cttttcttcc cccacaaatt attaaaatca gttgccatac
     7141 cacgatactt actagcaccg ttagcccaaa aatcgagaca atccccaaac caccatcgac
     7201 ggctgtccaa tcgaaatgat atggattttg caaggcattg gttttggcaa tggtttggac
     7261 ttggatcacc agtacccagc ggagtagcca gccgaaagcg atgagggcaa gcacgccgag
     7321 ccattgcaag cggtggtttt tggcagaaaa attgcaaatg agggcaatta gccagaaaat
     7381 gccgacaagg taagcggtga ttgagccatt gaagagctgg gcaaaatctt gtgtggcttg
     7441 tggactactg aatgctagtc cgacaagcga aagtgcggtt aaaatcaggc agagttttgt
     7501 ccatagcccc gtgttggttt gggtgtggaa cagcattttg cagaccgctt gggtaagccc
     7561 caatgccacc gcccacgcag aaaagagcat aatcggcagc agccacgcac tgtgccataa
     7621 ggttcttgtg ccggtttggt aggtttcaag cacggtgtag ccgataatgc cgatagcggt
     7681 gagtgtggca aacaggcgga atgcccaaag caagccttga ttttgcagta tcggcaactg
     7741 tagccacgc
//
LOCUS       DANLXO010000268         6461 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.guided.123, whole genome shotgun sequence.
ACCESSION   DANLXO010000268 DANLXO010000000
VERSION     DANLXO010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6461
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.guided.123"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            complement(<1..826)
                     /locus_tag="PXD69_002777"
     CDS             complement(<1..826)
                     /locus_tag="PXD69_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HDL6284900.1"
                     /translation="MGTYIPHREGIIQTIVRNSLTQYQAYASPSQTILDRLEHFAECA
                     DWTKGVVRIRCHDCGHSYFRPFSCKVFHLCPSCDQKRTLLYAEYLAEDLLLDLPHRQF
                     VFTIPKILRPYFKSDKRLFGEVSRLVFSLLSDFFSLAAGQELLCACVVSYQSFGEFAR
                     FHPHWHVLVLEGGFTKYDRFVYLPIGADEGMLKVWQAAIMALFLRKELIDQARVNMLR
                     DWKHSGFSIESETRLFNKADREALGQYVVRGATCAEKIQYDPASDTIIWTASPKGFY"
     gene            989..1834
                     /gene="sul2"
                     /locus_tag="PXD69_002778"
     CDS             989..1834
                     /gene="sul2"
                     /locus_tag="PXD69_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDL6284901.1"
                     /translation="MEYTSKSQIARNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQA
                     RKLMAEGADVIDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQ
                     AYALSRGVAYLNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHI
                     AAFFDARIAALTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLL
                     SVSRKSFLRALTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKE
                     TARIR"
     gene            2003..2806
                     /locus_tag="PXD69_002779"
                     /note="aph(3'')-Ib"
     CDS             2003..2806
                     /locus_tag="PXD69_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDL6284902.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            2806..3642
                     /locus_tag="PXD69_002780"
     CDS             2806..3642
                     /locus_tag="PXD69_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDL6284903.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            3978..4793
                     /locus_tag="PXD69_002781"
     CDS             3978..4793
                     /locus_tag="PXD69_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HDL6284904.1"
                     /translation="MSHIQRETSCSRPRLNSNLDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTALP
                     GKTAFQVLEEYPDSGENIVDALAAFLRRLHSIPVSNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
     gene            complement(4947..5540)
                     /locus_tag="PXD69_002782"
                     /pseudo
     CDS             complement(4947..5540)
                     /locus_tag="PXD69_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001201005.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA--6-aminopenicillanic acid
                     acyl-transferase"
     gene            complement(5541..5690)
                     /locus_tag="PXD69_002783"
                     /pseudo
     CDS             complement(5541..5690)
                     /locus_tag="PXD69_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238497.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
     gene            5710..6216
                     /locus_tag="PXD69_002784"
     CDS             5710..6216
                     /locus_tag="PXD69_002784"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL6284905.1"
                     /translation="MAYQTLKSTQSQTQEKSDERAKQLLGSRVVEQVSESERENGNGR
                     EISSGSRQTSNEQRTGYSGNSSQEYRQISKSGERLTNKTSENALIEPTRPIKNKNGSK
                     VAPTPTNTPKTQNNANSNLLSSEQYRQTMEFLREFNDRLEQIAQNILENQLKALRTKA
                     KPSHCQWY"
     gene            6194..6461
                     /locus_tag="PXD69_002785"
                     /pseudo
     CDS             6194..6461
                     /locus_tag="PXD69_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
BASE COUNT         1562 a         1632 c         1713 g         1554 t
ORIGIN      
        1 tgtagaatcc ctttgggcta gctgtccaga ttatcgtgtc ggaagctgga tcatactgaa
       61 ttttttctgc acaggtagcg ccgcgaacga catactggcc gagggcttct cgatcggcct
      121 tgttgaatag tctggtttcg ctctcgatgc taaagccgga atgcttccag tctctgagca
      181 tgttcactcg ggcttgatct attagttcct ttcgcagaaa caaagccata atcgctgctt
      241 gccagacctt gagcatccct tcgtcggctc caattggtaa atatacaaag cggtcgtact
      301 tggtgaaccc accttccaga accagaacat gccagtgcgg gtggaatcga gcgaattcac
      361 caaacgactg atagctgaca acacaggcac atagtagttc ttgaccggct gccagggaga
      421 aaaaatcaga aagcaaggag aataccagcc tggacacctc gccaaacagt cgcttatccg
      481 atttaaagta tggtctgaga atcttgggaa tcgtaaaaac aaattgccga tgcggtagat
      541 caaggagcaa atcctcggcc aggtattcag catagagtaa ggtccgtttt tggtcacagg
      601 atgggcaaag gtggaaaacc ttgcacgaaa atggcctgaa gtacgaatgt ccacaatcat
      661 ggcaacgtat tcgaacaaca cccttggtcc aatcggcaca ttcagcaaaa tgctcaaggc
      721 ggtcaaggat agtttgcgat ggacttgcgt aggcttggta ctgggttaga gaattgcgga
      781 ctatggtctg gattatccct tcccgatggg gaatgtaagt tcccatacct atacatacgc
      841 aggaaaacga tcatttgctt gcaattgcga agaaaataat ggaaaatgtg gactggcgcc
      901 acctaacaac cggttcgagc ggactcacgg gacaagcccg ttcgcagctc aaccgaaagt
      961 taggttgacg ccttcggcgc ggaggaaaat ggaatataca agtaaatcac aaatagctcg
     1021 aaataaatcg ctcatcattt tcggcatcgt caacataacc tcggacagtt tctccgatgg
     1081 aggccggtat ctggcgccag acgcagccat tgcgcaggcg cgtaagctga tggccgaggg
     1141 ggcagatgtg atcgacctcg gtccggcatc cagcaatccc gacgccgcgc ctgtttcgtc
     1201 cgacacagaa atcgcgcgta tcgcgccggt gctggacgcg ctcaaggcag atggcattcc
     1261 cgtctcgctc gacagttatc aacccgcgac gcaagcctat gccttgtcgc gtggtgtggc
     1321 ctatctcaat gatatccgcg gttttccaga cgctgcgttc tatccgcaat tggcgaaatc
     1381 atctgccaaa ctcgtcgtta tgcattcggt gcaagacggg caggcagatc ggcgcgaggc
     1441 acccgctggc gacatcatgg atcacattgc ggcgttcttt gacgcgcgca tcgcggcgct
     1501 gacgggtgcc ggtatcaaac gcaaccgcct tgtccttgat cccggcatgg ggttttttct
     1561 gggggctgct cccgaaacct cgctctcggt gctggcgcgg ttcgatgaat tgcggctgcg
     1621 cttcgatttg ccggtgcttc tgtctgtttc gcgcaaatcc tttctgcgcg cgctcacagg
     1681 ccgtggtccg ggggatgtcg gggccgcgac actcgctgca gagcttgccg ccgccgcagg
     1741 tggagctgac ttcatccgca cacacgagcc gcgccccttg cgcgacgggc tggcggtatt
     1801 ggcggcgctg aaagaaaccg caagaattcg ttaactgcac attcgggata tttctctata
     1861 ttcgcggttc agcaggcatg tcccctttga gggcgacccg acgacaggat aatcgacctt
     1921 atggtgcgca aatatttcgg cacagatggt attcgtggca aagccacctc cgcgcttcat
     1981 cagaaaactg aaggaacctc cattgaatcg aactaatatt ttttttggtg aatcgcattc
     2041 tgactggttg cctgtcagag gcggagaatc cggtgatttt gtttttcgac gtggtgacgg
     2101 gcatgccttc gcgaaaatcg cacctgcttc ccgccgcggt gagctcgctg gagagcgtga
     2161 ccgcctcatt tggctcaaag gtcgaggtgt ggcttgcccc gaggtgatca actggcagga
     2221 ggaacaggag ggtgcatgct tggtgataac ggcaattccg ggagtaccgg cggctgatct
     2281 gtctggagcg gatttgctca aagcgtggcc gtcaatgggg cagcaacttg gcgctgttca
     2341 cagcctatcg gttgatcaat gtccgtttga gcgcaggctg tcgcgaatgt tcggacgcgc
     2401 cgttgatgtg gtgtcccgca atgccgtcaa tcccgacttc ttaccggacg aggacaagag
     2461 tacgccgcag ctcgatcttt tggctcgtgt cgaacgagag ctaccggtgc ggctcgacca
     2521 agagcgcacc gatatggttg tttgccatgg tgatccctgc atgccgaact tcatggtgga
     2581 ccctaaaact cttcaatgca cgggtctgat cgaccttggg cggctcggaa cagcagatcg
     2641 ctatgccgat ttggcactca tgattgctaa cgccgaagag aactgggcag cgccagatga
     2701 agcagagcgc gccttcgctg tcctattcaa tgtattgggg atcgaagccc ccgaccgcga
     2761 acgccttgcc ttctatctgc gattggaccc tctgacttgg ggttgatgtt catgccgcct
     2821 gtttttcctg ctcattggca cgtttcgcaa cctgttctca ttgcggacac cttttccagc
     2881 ctcgtttgga aagtttcatt gccagacggg actcctgcaa tcgtcaaggg attgaaacct
     2941 atagaagaca ttgctgatga actgcgcggg gccgactatc tggtatggcg caatgggagg
     3001 ggagcagtcc ggttgctcgg tcgtgagaac aatctgatgt tgctcgaata tgccggggag
     3061 cgaatgctct ctcacatcgt tgccgagcac ggcgactacc aggcgaccga aattgcagcg
     3121 gaactgatgg cgaagctgta tgccgcatct gaggaacccc tgccttctgc ccttctcccg
     3181 atccgggatc gctttgcagc tttgtttcag cgggcgcgcg atgatcaaaa cgcaggttgt
     3241 caaactgact acgtccacgc ggcgattata gccgatcaaa tgatgagcaa tgcctcggaa
     3301 ctgcgtgggc tacatggcga tctgcatcat gaaaacatca tgttctccag tcgcggctgg
     3361 ctggtgatag atcccgtcgg tctggtcggt gaagtgggct ttggcgccgc caatatgttc
     3421 tacgatccgg ctgacagaga cgacctttgt ctcgatccta gacgcattgc acagatggcg
     3481 gacgcattct ctcgtgcgct ggacgtcgat ccgcgtcgcc tgctcgacca ggcgtacgct
     3541 tatgggtgcc tttccgcagc ttggaacgcg gatggagaag aggagcaacg cgatctagct
     3601 atcgcggccg cgatcaagca ggtgcgacag acgtcatact agatatcaag cgacttatcc
     3661 tatcccctgg gaacacatca atcttaccgg agaatatcgt tggccaaagc cttagcgtag
     3721 gatttcgccc tctcccgcaa acgacccctt tattgtaggt gggccagttg gtgattttga
     3781 acttttgctt tgccacggaa cggtctgcgt tgtcgggaag atgcgtgatc tgatccttca
     3841 actcagcaaa agttcgattt attcaacaaa tccacgttgt gtctcaaaat ctcttatgtt
     3901 atattgcaca agataaaaat atatcatcat gaacaataaa actgtctgct tacataaaca
     3961 gtaatacaag gggtgttatg agccatattc aacgggaaac gtcttgctcg aggccgcgat
     4021 taaattccaa cctggatgct gatttatatg ggtataaatg ggctcgcgat aatgtcgggc
     4081 aatcaggtgc gacaatctat cgattgtatg ggaagcccga tgcgccagag ttgtttctga
     4141 aacatggcaa aggtagcgtt gccaatgatg ttacagatga gatggtcaga ctaaactggc
     4201 tgacggcatt tatgcctctt ccgaccatca agcattttat ccgtactcct gatgatgcat
     4261 ggttactcac cactgcgctc cccgggaaaa cagcattcca ggtattagaa gaatatcctg
     4321 attcaggtga aaatattgtt gatgcgctgg cagcgttcct gcgccggttg cattcgattc
     4381 ctgttagtaa ttgtcctttt aacagcgatc gcgtatttcg tctcgctcag gcgcaatcac
     4441 gaatgaataa cggtttggtt gatgcgagtg attttgatga cgagcgtaat ggctggcctg
     4501 ttgaacaagt ctggaaagaa atgcataagc ttttgccatt ctcaccggat tcagtcgtca
     4561 ctcatggtga tttctcactt gataacctta tttttgacga ggggaaatta ataggttgta
     4621 ttgatgttgg acgagtcgga atcgcagacc gataccagga tcttgccatc ctatggaact
     4681 gcctcggtga attttctcct tcattacaga aacggctttt tcaaaaatat ggtattgata
     4741 atcctgatat gaataaattg cagtttcatt tgatgctcga tgagtttttc tgatagttag
     4801 tctttgtaga gacacaaacc tgaaattccg gacaccgcgc ttcaggacat ctccctggac
     4861 gccgatatct ggcagtatcc ggacggtact atcgaacgcc gggccaacgg tactcccctg
     4921 ccctttatga ctgacgaccg gctatttcac ccacgcactt ctccatgaaa tttagcatcg
     4981 tcgcggttaa tgtcgaaaat ttgccacctg acgtggttgg catcgagggt gaaaactgcc
     5041 gtggcgaggg tgttctcctc atccggatcg tcggcagcca gccggtaaat tggcagttct
     5101 gcgtcatggg tatctgagag aatggttttt gccgccgcgg cgtcaaacgg aggttgcgtt
     5161 tcccgccact gcacgaggcg taactgccgc gacgctgaac tgtcggtaac gatctgctca
     5221 acgccagcca gtgccgcatg caccagatgg ttggcatgcc cggttaccgt cgtcaggggt
     5281 agaacggaac agccttgacc ggtggcctca acgctgaaca gccgcgcatc gcccagctgc
     5341 ccgagcgtat ggtgaaacgc cccggatcgc ggctggccgg taagtatagt gatggcctcg
     5401 tcgagggtgt tcgcattcag cgaggcgcga gccaggatct gacgcggtaa tccctgcgga
     5461 cgatacactg cacggatgtt attcaccgtg ttaacgatac ctttttcatt taccgcaaag
     5521 gtgtggccgc aaatcgaccc cttgggtggc agtccgaaca gcgcccgatc atggtcgcgc
     5581 tctaggtagc tatccaaccc atcgagcagg cgctgttctg gccactcgcc gctttcaacc
     5641 ttgccgagta tccacgcgcc taccagcacc ttgcgccggg tgtcctcctt ggcgtataac
     5701 gagcaagttt tggcttacca aaccttaaaa tccacacaat cacagacaca ggaaaaatca
     5761 gatgaacgag caaaacaact cttgggttca agagtggttg aacaagtcag cgaaagcgag
     5821 cgagagaatg gcaacggacg agaaatttcg tcaggaagtc gccaaacgag caacgaacag
     5881 cggacaggat attcaggcaa ttctagccaa gaatatcgcc aaatatcaaa atcaggcgaa
     5941 agattaacta ataaaacgtc tgaaaacgct ctcatagagc ctacaagacc tatcaaaaat
     6001 aaaaatggta gtaaggtagc acccacacca acaaacacgc ctaaaacgca aaataacgca
     6061 aattctaatc tattgtcatc agaacagtat cggcagacta tggagttttt gcgagaattt
     6121 aacgaccgat tggagcaaat cgcccaaaat atcctagaaa atcagctaaa agcattgaga
     6181 actaaggcta aaccatctca ttgccaatgg tattgaatta cttgatgtag aaggtgcgat
     6241 tgtttcgggt acagctactg gcgactggac tctatcttgt gtacgaggcg atgtaaaaag
     6301 tatgaccttt gtgttcaatg atgggcgtat tgtcagcacg actaacaaag ggaatagtga
     6361 gaatatcggt tggttatctg atagttcagg cattccttgt gttcccgggg agagaaaaac
     6421 aaatgcacca gaatatttag gcacaaattt cttcttagcg g
//
LOCUS       DANLXO010000269         2968 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.guided.168, whole genome shotgun sequence.
ACCESSION   DANLXO010000269 DANLXO010000000
VERSION     DANLXO010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.guided.168"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            33..1247
                     /gene="floR"
                     /locus_tag="PXD69_002786"
     CDS             33..1247
                     /gene="floR"
                     /locus_tag="PXD69_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDL6284906.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSVLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLPIFASPAFWVYT
                     VGFSAGMGTFFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNSDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            1275..1580
                     /locus_tag="PXD69_002787"
     CDS             1275..1580
                     /locus_tag="PXD69_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL6284907.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE"
     gene            1692..>2968
                     /locus_tag="PXD69_002788"
     CDS             1692..>2968
                     /locus_tag="PXD69_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDL6284908.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRVADEPATPAQRRAS"
BASE COUNT          544 a          856 c          901 g          667 t
ORIGIN      
        1 aaacaaatat caatcgcaag gagatcatat tcatgaccac cacacgcccc gcgtgggcct
       61 atacgctgcc ggcagcactg ctgctgatgg ctcctttcga catcctcgct tcactggcga
      121 tggatattta tctccctgtc gttccagcga tgcccggcat cctgaacacg acgcccgcta
      181 tgatccaact cacgttgagc ctctatatgg tgatgctcgg cgtgggccag gtgatttttg
      241 gtccgctctc agacagaatc gggcgacggc caattctact tgcgggcgca acggctttcg
      301 tcattgcgtc tctgggagca gcttggtctt caactgcacc ggcctttgtc gctttccgtc
      361 tacttcaagc agtgggcgcg tcggccatgc tggtggcgac gttcgcgacg gttcgcgacg
      421 tttatgccaa ccgtcctgag ggtgtcgtca tctacggcct tttcagttcg gtgctggcgt
      481 tcgtgcctgc gctcggccct atcgccggag cattgatcgg cgagttcttg ggatggcagg
      541 cgatattcat tactttggct atactggcga tgctcgcact cctaaatgcg ggtttcaggt
      601 ggcacgaaac ccgccctctg gatcaagtca agacgcgccg atctgtcttg ccgatcttcg
      661 cgagtccggc tttttgggtt tacactgtcg gctttagcgc cggtatgggc accttcttcg
      721 tcttcttctc gacggctccc cgtgtgctca taggccaagc ggaatattcc gagatcggat
      781 tcagctttgc cttcgccact gtcgcgcttg taatgatcgt gacaacccgt ttcgcgaagt
      841 cctttgtcgc cagatggggc atcgcaggat gcgtggcgcg tgggatggcg ttgcttgttt
      901 gcggagcggt cctgttgggg atcggcgaac tttacggctc gccgtcattc ctcaccttca
      961 tcctaccgat gtgggttgtc gcggtcggta ttgtcttcac ggtgtccgtt accgcgaacg
     1021 gcgctttggc agagttcgac gacatcgcgg gatcagcggt cgcgttctac ttctgcgttc
     1081 aaagcctgat agtcagcatt gtcgggacat tggcggtggc acttttaaac agtgacacag
     1141 cgtggcccgt gatctgttac gccacggcga tggcggtact ggtttcgttg gggctggtgc
     1201 tccttcggct ccgtggggct gccaccgaga agtcgccagt cgtctaaccg acgactggta
     1261 gcaggcccgc tccgatgcgg cgcactaacc atcgaaacct cgtgaatgtc ggtatcctgt
     1321 ctggcaggat accgctcatt tcccttgttc agttcatcgc cgtcgccgag catctgaatt
     1381 ttcggcatgc ggccaaggca cttggtatca gccagtcgag cgtcagcgcg cgtgtgaaag
     1441 cgctggagga taaccttggt gtcctgctat ttgagcgcca tgcgcggggc gttcggctaa
     1501 cagacgcagg caggcacttc atggagcgtg tcacggcggg tgtcgatcaa ctcgatcacg
     1561 cagtgaagac cgcggagtga cgggcactgg ctggcaatgt ctagcaacgg caggcatttc
     1621 ggctgagggt aaaagaactt tccgctaagc gatagactgt atgtaaacac agtattgcaa
     1681 ggacgcggaa catgcctcat gtggcggcca ggacggccag ccgggatcgg gatactggtc
     1741 gttaccagag ccaccgaccc gagcaaaccc ttctctatca gatcgttgac gagtattacc
     1801 cggcattcgc tgcgcttatg gcagagcagg gaaaggaatt gccgggctat gtgcaacggg
     1861 aatttgaaga atttctccaa tgcgggcggc tggagcatgg ctttctacgg gttcgctgcg
     1921 agtcttgcca cgccgagcac ctggtcgctt tcagctgtaa gcgtcgcggt ttctgcccga
     1981 gctgtggggc gcggcggatg gccgaaagtg ccgccttgct ggttgatgaa gtactgcctg
     2041 aacaacccat gcgtcagtgg gtgttgagct tcccgtttca gctgcgtttc ctgtttgcca
     2101 gccggcccga gatcatgggg tgggtgctgg gcatcgttta ccgcgtcatt gccacgcacc
     2161 tggtcaagaa agcgggccat acccaccaag tggccaagac gggcgcggtc accctgatcc
     2221 agcgttttgg atcggcgctc aatctgaatg ttcacttcca catgctgttt ctcgacggtg
     2281 tgtatgtcga gcaatcccac ggctcagcgc gtttccgctg ggtcaaggcg ccgaccagcc
     2341 cagagctcac ccagctgacg cacaccatcg cccaccgggt gggtcgctat ctggaacggc
     2401 aaggcctgct ggaacgggat gtcgaaaaca gctatctggc ctcggatgcg gtggatgacg
     2461 acccgatgac acccctgctg gggcactcga tcacttaccg tatcgctgtc ggttcacagg
     2521 cggggcgaaa ggtgttcact ttgcaaactc tgccgaccag tggtgatccg ttcggtgacg
     2581 ggattggcaa ggtagccggg tccagcctgc acgccggcgt ggcggccagg gccgatgaac
     2641 gcaagaagct cgaacggctg tgccggtaca tcagccgccc ggcggtatcc gagaagcggc
     2701 tgtcgttaac acgaggcggc aacgtgcgct accagctcaa gacgccgtac cgggacggca
     2761 ccacgcacgt cattttcgaa ccattggatt tcattgcaag gctggccgcc ctggtaccga
     2821 agcccagagt caacctaacc cgcttccacg gggtgttcgc acccaacagt cggcaccggg
     2881 cgttggtcac gccggcaaaa cggggcaggg gcaacaaggt cagggtggct gatgaaccgg
     2941 caacaccagc acaacggcga gcgtcgat
//
LOCUS       DANLXO010000270         2826 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.guided.169, whole genome shotgun sequence.
ACCESSION   DANLXO010000270 DANLXO010000000
VERSION     DANLXO010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.guided.169"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            351..1826
                     /gene="msr(E)"
                     /locus_tag="PXD69_002789"
     CDS             351..1826
                     /gene="msr(E)"
                     /locus_tag="PXD69_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000052512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein Msr(E)"
                     /protein_id="HDL6284909.1"
                     /translation="MSLIIKARNIRLDYAGRDVLDIDELEIHSYDRIGLVGDNGAGKS
                     SLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLGVSNVQNDTMSG
                     GEETRAKIAAAFSQQVHGILADEPTSHLDLNGIDLLIGQLKAFDGALLVISHDRYFLD
                     MVVDKIWELKDGKITEYWGGYSDYLRQKEEERQHQAVEYELMMKERERLESAVQEKRQ
                     QANRLDNKKKGEKSKNSTESAGRLGHAKMTGTKQRKLYQAAKSMEKRLAALEDIQAPE
                     HLRSIRFRQSSALELHNKFPITADGLSLKFGSRTIFDDANFIIPLGAKVAITGSNGTG
                     KTSLLKMISERADGLTISPKAEIGYFTQTGYKFNTHKSVLSFMQEECEYTVAEIRAVL
                     ASMGIGANDIQKNLSDLSGGEIIKLLLSKMLLGKYNILLMDEPGNYLDLKSIAALETM
                     MKSYAGTIIFVSHDKQLVDNIADIIYEIKDHKIIKTFERDC"
     gene            1882..2766
                     /locus_tag="PXD69_002790"
     CDS             1882..2766
                     /locus_tag="PXD69_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mph(E) family macrolide 2'-phosphotransferase"
                     /protein_id="HDL6284910.1"
                     /translation="MTIQDIQSLAEAHGLLITDKMNFNEMGIDFKVVFALDTKGQQWL
                     LRIPRRDGMREQIKKEKRILELVKKHLSVEVPDWRISSTELVAYPILKDNPVLNLDAE
                     TYEIIWNMDKDSPKYITSLAKTLFEIHSIPEKEVRENDLKIMKPSDLRPEIANNLQLV
                     KSEIGISEQLETRYRKWLDNDVLWADFTQFIHGDLYAGHVLASKDGAVSGVIDWSTAH
                     IDDPAIDFAGHVTLFGEESLKTLIIEYEKLGGKVWNKLYEQTLERAAASPLMYGLFAL
                     ETQNESLIVGAKAQLGVI"
BASE COUNT          961 a          460 c          592 g          813 t
ORIGIN      
        1 agacaaaagg ctgcctcatc gctaactttg caacagtgcc taaaataagc cttatatcca
       61 agcataaaac aaggttgtct agacttcttt taacagtaaa gttatcataa aactgaattt
      121 tattttttag gtaagtttat gcattctatc cgcattcgtt aagacacaac tatttgcata
      181 gtgacactat tttataatgg tgggcttttg ttgtgtcttt aagaatatat gcggatatat
      241 aaagtaaaag tatgcttaat ttataagtat gcttttagtg catagtttcc agttataact
      301 taattgacta gctattaaaa atttcaagag ctaaacagga gtaaataaaa atgagtttaa
      361 ttattaaagc gagaaacata cgcttggatt atgctgggcg tgatgttttg gatattgatg
      421 aattggaaat tcactcttat gaccgtattg gtcttgtggg tgataacgga gcaggaaaga
      481 gtagtttact caaagtactt aatggcgaaa ttgttttagc cgaagcgaca ttacagcgtt
      541 ttggtgattt tgcacatatc agccaactgg gcggaatcga aatagaaacg gtcgaagacc
      601 gggcaatgtt atctcgcctt ggtgtttcca atgtacaaaa cgacacaatg agtggcggag
      661 aggaaactcg tgcaaaaatt gctgccgcat tttcccaaca agtacatggc attctagcgg
      721 atgaaccaac cagccacctt gatctcaatg gaatagatct acttattggt caacttaaag
      781 catttgatgg agcattactt gttatcagtc atgaccgata ttttcttgat atggttgtag
      841 acaagatatg ggagttaaaa gacggtaaaa ttacggaata ttggggtggt tactcggatt
      901 acttgcgtca aaaagaagaa gagcgacaac accaagccgt agaatatgag ctgatgatga
      961 aggaacggga gcgattagaa tctgctgtgc aagaaaaacg ccagcaagct aatcgattag
     1021 acaataagaa aaaaggagaa aaatccaaaa actctaccga aagtgctgga cgacttgggc
     1081 atgcaaaaat gactggcacc aagcaaagaa aactgtatca ggcagctaag agtatggaaa
     1141 agcgtttggc tgcattagaa gatattcaag caccagagca tttgcgttct attcgttttc
     1201 gtcaaagttc agccctagaa ctgcacaata agttcccgat tacggcagat ggtctgagct
     1261 taaaatttgg tagccgtact atctttgatg acgctaactt tataataccg cttggcgcta
     1321 aagtcgctat aactggatcg aatggaacag ggaaaacgtc cttgttaaaa atgatatcag
     1381 aacgtgctga tggattaacc atatctccaa aagctgaaat tggctacttt acacaaacag
     1441 gatataaatt taacacgcat aaatctgtgc tctcctttat gcaggaagag tgcgagtaca
     1501 cagttgcgga aattcgtgca gtattggctt caatggggat cggagcgaat gatattcaaa
     1561 aaaacttatc cgacttatcg ggaggtgaaa tcatcaaact gcttttatcc aaaatgcttt
     1621 taggaaaata taatattttg cttatggatg aaccaggaaa ctatcttgac ctaaaaagta
     1681 ttgccgcatt agaaacaatg atgaagtcct atgcaggaac tattatcttc gtatctcatg
     1741 acaagcaatt ggtcgataat attgctgaca ttatctacga gatcaaagac cacaaaatca
     1801 tcaagacttt tgagagagat tgttaatgat agccaatcta atccgaacat taattattga
     1861 actctttaaa ggaaattaaa aatgacaatt caagatattc aatcacttgc tgaagcacac
     1921 ggcttgttga ttacggacaa aatgaatttc aatgaaatgg gcattgattt taaggtcgtt
     1981 tttgctcttg atacaaaggg gcaacaatgg ttgctgcgta ttcctcgtcg tgatggcatg
     2041 agggaacaaa tcaagaaaga aaaacgcatt ttagaattgg taaaaaaaca tctttctgta
     2101 gaggttcctg attggagaat ttcatctaca gaattagtgg cttatcccat acttaaagat
     2161 aatcctgttt taaatttgga tgctgaaacc tatgaaataa tttggaatat ggacaaagat
     2221 agcccgaaat acataacatc tttggcaaaa accttatttg aaatccatag tattcctgaa
     2281 aaagaagttc gggaaaatga tttgaaaatt atgaaacctt cagatttaag acctgaaata
     2341 gcaaacaatt tgcagttagt aaaatctgaa attggtataa gtgagcaatt ggaaacccgc
     2401 tacagaaaat ggttggataa tgatgttcta tgggcagatt tcacccaatt tatacatggc
     2461 gatttatatg ctgggcatgt actagcttca aaggatggag ctgtttcagg cgttattgat
     2521 tggtcaacag cccatataga tgacccagcg attgattttg ctgggcatgt aactttgttt
     2581 ggagaagaaa gcctcaaaac tctaatcatc gagtatgaaa aactaggggg taaagtttgg
     2641 aataaactat atgaacagac tttagaaaga gcagcggcct ctcctttgat gtatggttta
     2701 tttgccttag aaactcaaaa tgaaagcctt atcgttggag caaaagctca gttgggagtt
     2761 atataattta aaaatatgat tgctgaggca ctgttgcaaa tagtcggtgg tgataaactt
     2821 atcatc
//
LOCUS       DANLXO010000271         2447 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.guided.186, whole genome shotgun sequence.
ACCESSION   DANLXO010000271 DANLXO010000000
VERSION     DANLXO010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.guided.186"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            94..627
                     /gene="aadB"
                     /locus_tag="PXD69_002791"
     CDS             94..627
                     /gene="aadB"
                     /locus_tag="PXD69_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase
                     ANT(2'')-Ia"
                     /protein_id="HDL6284911.1"
                     /translation="MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDD
                     IDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEA
                     PQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLG
                     AEKVEVLRAAFRSRYAA"
     gene            685..1476
                     /locus_tag="PXD69_002792"
     CDS             685..1476
                     /locus_tag="PXD69_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA25"
                     /protein_id="HDL6284912.1"
                     /translation="MREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKP
                     YSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPA
                     QYQPVLLEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            1553..2380
                     /locus_tag="PXD69_002793"
     CDS             1553..2380
                     /locus_tag="PXD69_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_034033256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-2"
                     /protein_id="HDL6284913.1"
                     /translation="MAIRIFAILFSIFSLATFAHAQEGTLERSDWRKFFSEFQAKGTI
                     VVADERQADRAMLVFDPVRSKKRYSPASTFKIPHTLFALDAGAVRDEFQIFRWDGVNR
                     GFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYGNADPSTSNGDYWI
                     EGSLAISAQEQIAFLRKLYRNELPFRVEHQRLVKDLMIVEAGRNWILRAKTGWEGRMG
                     WWVGWVEWPTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIEALPPNPAVNSDAAR"
BASE COUNT          593 a          585 c          700 g          569 t
ORIGIN      
        1 aataaatcaa ttattattat actgctgatc accgtattag cagcaacgat gttacgcagc
       61 agggcagtcg ccctaaaaca aaggttaggc cgcatggaca caacgcaggt cacattgata
      121 cacaaaattc tagctgcggc agatgagcga aatctgccgc tctggatcgg tgggggctgg
      181 gcgatcgatg cacggctagg gcgtgtaaca cgcaagcacg atgatattga tctgacgttt
      241 cccggcgaga ggcgcggcga gctcgaggca atagttgaaa tgctcggcgg gcgcgtcatg
      301 gaggagttgg actatggatt cttagcggag atcggggatg agttacttga ctgcgaacct
      361 gcttggtggg cagacgaagc gtatgaaatc gcggaggctc cgcagggctc gtgcccagag
      421 gcggctgagg gcgtcatcgc cgggcggcca gtccgttgta acagctggga ggcgatcatc
      481 tgggattact tttactatgc cgatgaagta ccaccagtgg actggcctac aaagcacata
      541 gagtcctaca ggctcgcatg cacctcactc ggggcggaaa aggttgaggt cttgcgtgcc
      601 gctttcaggt cgcgatatgc ggcctaacaa ttcgtccaag ccgacgccgc ttcgcggcgc
      661 ggcttaactc aggtgttaga catcatgagg gaagcggtga ccatcgaaat ttcgaaccaa
      721 ctatcagagg tgctaagcgt cattgagcgc catctggaat caacgttgct ggccgtgcat
      781 ttgtacggct ccgcagtgga tggcggcctg aagccataca gcgatattga tttgttggtt
      841 actgtggccg taaagcttga tgaaacgacg cggcgagcat tgctcaatga tcttatggag
      901 gcttcggctt tccctggcga gagcgagacg ctccgcgcta tagaagtcac ccttgtcgtg
      961 catgacgaca tcatcccgtg gcgttatccg gctaagcgcg agctgcaatt tggagaatgg
     1021 cagcgcaatg acattcttgc gggtatcttc gagccagcca tgatcgacat tgatctggct
     1081 atcttgctga caaaagcaag agaacatagc gttgccttgg taggtccagc ggcggaggaa
     1141 ctctttgatc cggttcctga acaggatcta tttgaggcgc taaatgaaac cttaacgcta
     1201 tggaactcgc cgcccgactg ggctggcgat gagcgaaatg tagtgcttac gttgtcccgc
     1261 atttggtaca gcgcaataac cggcaaaatc gcgccgaagg atgtcgctgc cgactgggca
     1321 ataaaacgcc tacctgccca gtatcagccc gtcttacttg aagctagaca ggcttatctt
     1381 ggacaagaag aagatcgctt ggcctcgcgc gcagatcagt tggaagaatt tgttcactac
     1441 gtgaaaggcg agatcaccaa ggtagtcggc aaataatgtc taacaattcg ttcaagccga
     1501 cgccgcttcg cggcgcggct taccttggcc gttgggcatt aaggaaaagt taatggcaat
     1561 ccgaatcttc gcgatacttt tctccatttt ttctcttgcc actttcgcgc atgcgcaaga
     1621 aggcacgcta gaacgttctg actggaggaa gtttttcagc gaatttcaag ccaaaggcac
     1681 gatagttgtg gcagacgaac gccaagcgga tcgtgccatg ttggtttttg atcctgtgcg
     1741 atcgaagaaa cgctactcgc ctgcatcgac attcaagata cctcatacac tttttgcact
     1801 tgatgcaggc gctgttcgtg atgagttcca gatttttcga tgggacggcg ttaacagggg
     1861 ctttgcaggc cacaatcaag accaagattt gcgatcagca atgcggaatt ctactgtttg
     1921 ggtgtatgag ctatttgcaa aggaaattgg tgatgacaaa gctcggcgct atttgaagaa
     1981 aatcgactat ggcaacgccg atccttcgac aagtaatggc gattactgga tagaaggcag
     2041 ccttgcaatc tcggcgcagg agcaaattgc atttctcagg aagctctatc gtaacgagct
     2101 gccctttcgg gtagaacatc agcgcttggt caaggatctc atgattgtgg aagccggtcg
     2161 caactggata ctgcgtgcaa agacgggctg ggaaggccgt atgggttggt gggtaggatg
     2221 ggttgagtgg ccgactggct ccgtattctt cgcactgaat attgatacgc caaacagaat
     2281 ggatgatctt ttcaagaggg aggcaatcgt gcgggcaatc cttcgctcta ttgaagcgtt
     2341 accgcccaac ccggcagtca actcggacgc tgcgcgataa aaccgcgcag cgccggttac
     2401 ttcaacgggc actgttgcaa atagtcggtg gtgataaact tatcatc
//
LOCUS       DANLXO010000272         1391 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.guided.215, whole genome shotgun sequence.
ACCESSION   DANLXO010000272 DANLXO010000000
VERSION     DANLXO010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.guided.215"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            47..1249
                     /gene="tet(H)"
                     /locus_tag="PXD69_002794"
     CDS             47..1249
                     /gene="tet(H)"
                     /locus_tag="PXD69_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(H)"
                     /protein_id="HDL6284914.1"
                     /translation="MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYG
                     VLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRI
                     IAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMP
                     FIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATY
                     FIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEK
                     TTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGK
                     LQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTT
                     PKAVISTP"
BASE COUNT          365 a          289 c          282 g          455 t
ORIGIN      
        1 agatatatta cacccactct atcactgata gatttttagg atctcaatga ataaatcaat
       61 tattattata ctgctgatca ccgtattaga tgccattggt atcgggctta tcatgccagt
      121 actccctact ctattaaatg aatttgtcag tgaaaattca ctggcaaccc attacggtgt
      181 gctattagcg ctctatgcta ccatgcaggt tatttttgct cctattctag gacgactgtc
      241 tgataaatac ggcagaaaac ccatcttgct gttttccctt ttaggcgcgg cactcgacta
      301 tcttttaatg gcattctcaa ccacactttg gatgctctat attgggcgca tcattgcggg
      361 gatcacaggc gcaacaggtg ccgtatgtgc atcagcgatg agtgatgtga ctcccgctaa
      421 aaatcgaact cgctattttg gtttcttagg tggtgctttt ggtgttggcc ttattatcgg
      481 cccaatgcta gggggattat taggtgatat cagtgctcat atgccattta tttttgccgc
      541 tatttcacac tcgatattat taatactctc tttgctcttt ttccgagaaa cacaaaaaag
      601 agaagcgctt gttgccaata ggacacctga aaaccaaact gcctcaaata cagtcactgt
      661 tttttttaag aaaagcctct acttttggtt agcaacctat tttattatcc agcttatcgg
      721 gcaaattcct gccaccatct gggtgctgtt tacacaatat cgttttgatt ggaacacaac
      781 ttctatcggt atgtctttgg cggttctggg tgtattaaat attttctttc aggcgattgt
      841 cgctgggaaa ttggcacaaa aatggggcga aaaaaccacc attatgatca gtatgtctat
      901 tgatatgatg ggctgtttat tattagcgtg gataggccac gtttgggtca tcttaccagc
      961 attaatttgc ttagcggcag gaggtatggg gcaacccgca ttacaaggtt atttatcaaa
     1021 atctgtcgat gataatgcgc aagggaaatt acaaggtact ctggtgagcc taaccaatat
     1081 taccgggatc attggtcccc ttttatttgc ctttatttat agttatagcg tcgcttattg
     1141 ggatggtctg ttatggctga tgggggcaat actttatgct atgttgctta ttaccgctta
     1201 ttttcaccaa agaaaaacca cacctaaagc tgttatttca accccttaat actagaaatt
     1261 ataaagatca taaaagtcct gtccgctctt aataacgttg ataggacttt atttgggtat
     1321 ccggattaca gggttgaaac agggctataa acgccccgcc tcaatctccc gcaccagtgt
     1381 tgatatgtca g
//
LOCUS       DANLXO010000273          727 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25749872-rid16719753.guided.248, whole genome shotgun sequence.
ACCESSION   DANLXO010000273 DANLXO010000000
VERSION     DANLXO010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25749872
            Sequence Read Archive: SRR17934097
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574581.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574581.1
            Genome Coverage       :: 38x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:19:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,795
            CDSs (total)                      :: 2,737
            Genes (coding)                    :: 2,660
            CDSs (with protein)               :: 2,660
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 41 of 77
            Pseudo Genes (incomplete)         :: 25 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 1 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25749872-rid16719753.guided.248"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: IA"
                     /collection_date="2020-01-07"
                     /collected_by="Iowa State University Veterinary Diagnostic
                     Laboratory, Ames, IA"
     gene            225..>727
                     /locus_tag="PXD69_002795"
     CDS             225..>727
                     /locus_tag="PXD69_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N(6)-methyltransferase family
                     protein"
                     /protein_id="HDL6284915.1"
                     /translation="MNKNTKIKNKNFNIKDSQNFLHNTKLVEDLLFKSNITKEDFVVE
                     IGPGKGIITKALSKICKAVNAIEFDSVLADKLSHEFKSSNVSIIEADFLKYNLPDHNY
                     KVFSNIPFNITASILNKLLDSENPPLDTFLIMQYEPFLKYAGAPSYKESYKSLLYKPF
                     FKTNILH"
BASE COUNT          267 a          102 c          107 g          251 t
ORIGIN      
        1 ttggacttgg gtgaaaaggg cgtttattct tcctatacgt tggtttttct catgtcagta
       61 gagaatattc taacagtgta aatataatct taaaaatctt acaagcttga agcctgataa
      121 tttcaggctt ctttcatttt taaatttccg aacttgtagg aattatacat aaatcaaaac
      181 aattcttact tgacaaaatc agtctataat tgtaatatat ggatatgaat aaaaacacta
      241 aaataaaaaa caaaaatttc aacattaaag actcacagaa ttttttgcat aatactaaat
      301 tagtcgaaga tttgcttttt aaaagcaata taactaagga ggattttgtt gttgagattg
      361 ggcctggaaa aggcataata accaaggcat taagcaaaat ctgcaaagcc gttaatgcta
      421 ttgagttcga tagtgtattg gctgataagt tgagccatga atttaaaagt tcaaatgtgt
      481 ctattattga agccgatttt ttaaaataca atttaccaga ccataattat aaagtttttt
      541 caaacattcc atttaacata acggcaagta ttttaaataa attgttagat agtgagaacc
      601 cacccttaga tactttttta attatgcaat atgaaccttt tttaaagtat gcgggtgcac
      661 catcttacaa ggagtcttat aaatctttat tatataaacc atttttcaaa actaacatat
      721 tgcatag
//
